Multiple sequence alignment - TraesCS4A01G233500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G233500 chr4A 100.000 7274 0 0 1 7274 542482624 542475351 0.000000e+00 13433
1 TraesCS4A01G233500 chr4B 92.220 5437 280 75 326 5676 80985271 80990650 0.000000e+00 7564
2 TraesCS4A01G233500 chr4B 90.255 1098 71 22 5673 6760 80990810 80991881 0.000000e+00 1402
3 TraesCS4A01G233500 chr4B 88.626 211 13 4 971 1181 80978446 80978645 5.640000e-61 246
4 TraesCS4A01G233500 chr4D 87.551 2209 176 43 795 2959 54677946 54680099 0.000000e+00 2464
5 TraesCS4A01G233500 chr4D 91.023 1114 59 18 5673 6772 54683344 54684430 0.000000e+00 1465
6 TraesCS4A01G233500 chr4D 90.506 1106 87 11 2981 4073 54680568 54681668 0.000000e+00 1445
7 TraesCS4A01G233500 chr4D 88.750 880 68 17 4813 5676 54682398 54683262 0.000000e+00 1048
8 TraesCS4A01G233500 chr4D 94.576 590 24 3 4234 4816 54681745 54682333 0.000000e+00 905
9 TraesCS4A01G233500 chr4D 91.121 473 22 8 225 679 54677433 54677903 2.230000e-174 623
10 TraesCS4A01G233500 chr4D 95.556 180 8 0 7012 7191 54700149 54700328 9.230000e-74 289
11 TraesCS4A01G233500 chr4D 90.610 213 12 6 6822 7027 54684828 54685039 7.190000e-70 276
12 TraesCS4A01G233500 chr4D 95.690 116 4 1 121 235 211385437 211385322 1.250000e-42 185
13 TraesCS4A01G233500 chr4D 95.652 115 3 2 113 227 317234732 317234620 4.480000e-42 183
14 TraesCS4A01G233500 chr4D 93.443 122 6 2 1 122 54677315 54677434 5.800000e-41 180
15 TraesCS4A01G233500 chr3B 80.871 528 62 20 1055 1581 741677996 741678485 5.330000e-101 379
16 TraesCS4A01G233500 chr6A 85.024 207 25 5 1375 1579 390584536 390584738 9.570000e-49 206
17 TraesCS4A01G233500 chr6A 98.165 109 1 1 120 227 14133964 14134072 9.630000e-44 189
18 TraesCS4A01G233500 chr6A 91.538 130 7 4 117 243 309871596 309871468 7.500000e-40 176
19 TraesCS4A01G233500 chr7A 95.833 120 3 2 115 233 735739797 735739915 7.450000e-45 193
20 TraesCS4A01G233500 chrUn 97.345 113 2 1 115 226 352766871 352766983 2.680000e-44 191
21 TraesCS4A01G233500 chr2A 96.491 114 3 1 121 233 2648814 2648701 3.460000e-43 187
22 TraesCS4A01G233500 chr5A 92.248 129 8 2 112 238 385954879 385954751 1.610000e-41 182
23 TraesCS4A01G233500 chr1D 92.063 126 9 1 118 242 447959462 447959587 7.500000e-40 176


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G233500 chr4A 542475351 542482624 7273 True 13433.00 13433 100.0000 1 7274 1 chr4A.!!$R1 7273
1 TraesCS4A01G233500 chr4B 80985271 80991881 6610 False 4483.00 7564 91.2375 326 6760 2 chr4B.!!$F2 6434
2 TraesCS4A01G233500 chr4D 54677315 54685039 7724 False 1050.75 2464 90.9475 1 7027 8 chr4D.!!$F2 7026

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
632 651 0.161870 GCTCAACAACGCTCGACTTC 59.838 55.000 0.00 0.00 0.00 3.01 F
1649 1715 0.034670 GCAATCCCTGTGCTCTCCTT 60.035 55.000 0.00 0.00 39.00 3.36 F
2620 2695 0.250727 GTTGGGACTTGCAGGTGCTA 60.251 55.000 19.51 11.55 42.66 3.49 F
2679 2756 0.839277 TGACTATGACCCATGGCTGG 59.161 55.000 6.09 0.00 42.73 4.85 F
4107 4660 1.140852 TGAATCGTTAGGCATGAGGGG 59.859 52.381 0.00 0.00 0.00 4.79 F
5090 5778 0.034896 CCCACTGTACCCTGTGTCAC 59.965 60.000 0.00 0.00 38.47 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2037 2110 0.467844 AGGCACAACATCTTGCACCA 60.468 50.000 0.00 0.00 40.75 4.17 R
2862 2940 0.333652 TCTGTCGATAGTGGGTCCCA 59.666 55.000 6.47 6.47 37.40 4.37 R
3831 4382 0.032403 GGCAATGCAGCAACAGTCAA 59.968 50.000 7.79 0.00 35.83 3.18 R
4433 5051 2.040178 AGTTCGAGTCATACCCCATCC 58.960 52.381 0.00 0.00 0.00 3.51 R
5269 5963 0.179086 GAGAGCAGGCAGGTTAGAGC 60.179 60.000 0.00 0.00 0.00 4.09 R
6530 7423 0.031857 CGGTTCATGCACAAAGCCAA 59.968 50.000 0.00 0.00 44.83 4.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 8.435187 AGATGAATGATTGAGCTAACAGGATTA 58.565 33.333 0.00 0.00 0.00 1.75
125 126 9.856488 GGAAAAATAATTCTTTGGAACTACTCC 57.144 33.333 0.00 0.00 45.64 3.85
129 130 8.494016 AATAATTCTTTGGAACTACTCCTTCG 57.506 34.615 0.00 0.00 45.64 3.79
130 131 4.950205 TTCTTTGGAACTACTCCTTCGT 57.050 40.909 0.00 0.00 45.64 3.85
131 132 4.950205 TCTTTGGAACTACTCCTTCGTT 57.050 40.909 0.00 0.00 45.64 3.85
132 133 4.879598 TCTTTGGAACTACTCCTTCGTTC 58.120 43.478 0.00 0.00 45.64 3.95
134 135 2.274920 GGAACTACTCCTTCGTTCCG 57.725 55.000 4.85 0.00 44.86 4.30
135 136 1.815003 GGAACTACTCCTTCGTTCCGA 59.185 52.381 4.85 0.00 44.86 4.55
136 137 2.229784 GGAACTACTCCTTCGTTCCGAA 59.770 50.000 4.85 0.00 44.86 4.30
137 138 3.119209 GGAACTACTCCTTCGTTCCGAAT 60.119 47.826 4.85 0.00 44.85 3.34
138 139 4.492611 GAACTACTCCTTCGTTCCGAATT 58.507 43.478 0.00 0.00 44.85 2.17
139 140 5.393461 GGAACTACTCCTTCGTTCCGAATTA 60.393 44.000 4.85 0.00 44.85 1.40
140 141 4.991472 ACTACTCCTTCGTTCCGAATTAC 58.009 43.478 0.00 0.00 44.85 1.89
141 142 4.704057 ACTACTCCTTCGTTCCGAATTACT 59.296 41.667 0.00 0.00 44.85 2.24
142 143 4.532314 ACTCCTTCGTTCCGAATTACTT 57.468 40.909 0.00 0.00 44.85 2.24
143 144 4.243270 ACTCCTTCGTTCCGAATTACTTG 58.757 43.478 0.00 0.00 44.85 3.16
144 145 4.243270 CTCCTTCGTTCCGAATTACTTGT 58.757 43.478 0.00 0.00 44.85 3.16
145 146 4.240096 TCCTTCGTTCCGAATTACTTGTC 58.760 43.478 0.00 0.00 44.85 3.18
146 147 3.060363 CCTTCGTTCCGAATTACTTGTCG 59.940 47.826 0.00 0.00 44.85 4.35
147 148 1.987770 TCGTTCCGAATTACTTGTCGC 59.012 47.619 0.00 0.00 35.93 5.19
148 149 1.722464 CGTTCCGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 35.93 5.10
149 150 2.222508 CGTTCCGAATTACTTGTCGCAG 60.223 50.000 0.00 0.00 35.93 5.18
150 151 2.004583 TCCGAATTACTTGTCGCAGG 57.995 50.000 0.00 0.00 35.93 4.85
151 152 1.274167 TCCGAATTACTTGTCGCAGGT 59.726 47.619 0.00 0.91 35.93 4.00
152 153 2.492881 TCCGAATTACTTGTCGCAGGTA 59.507 45.455 0.00 0.00 35.93 3.08
153 154 3.131577 TCCGAATTACTTGTCGCAGGTAT 59.868 43.478 3.46 0.00 35.93 2.73
154 155 3.245284 CCGAATTACTTGTCGCAGGTATG 59.755 47.826 3.46 0.00 35.93 2.39
155 156 3.245284 CGAATTACTTGTCGCAGGTATGG 59.755 47.826 3.46 0.00 0.00 2.74
156 157 4.439057 GAATTACTTGTCGCAGGTATGGA 58.561 43.478 3.46 0.00 0.00 3.41
157 158 4.689612 ATTACTTGTCGCAGGTATGGAT 57.310 40.909 3.46 0.00 0.00 3.41
158 159 2.315925 ACTTGTCGCAGGTATGGATG 57.684 50.000 0.00 0.00 0.00 3.51
159 160 1.555075 ACTTGTCGCAGGTATGGATGT 59.445 47.619 0.00 0.00 0.00 3.06
160 161 2.764010 ACTTGTCGCAGGTATGGATGTA 59.236 45.455 0.00 0.00 0.00 2.29
161 162 3.388024 ACTTGTCGCAGGTATGGATGTAT 59.612 43.478 0.00 0.00 0.00 2.29
162 163 3.660501 TGTCGCAGGTATGGATGTATC 57.339 47.619 0.00 0.00 0.00 2.24
163 164 3.230976 TGTCGCAGGTATGGATGTATCT 58.769 45.455 0.00 0.00 0.00 1.98
164 165 4.403734 TGTCGCAGGTATGGATGTATCTA 58.596 43.478 0.00 0.00 0.00 1.98
165 166 4.830600 TGTCGCAGGTATGGATGTATCTAA 59.169 41.667 0.00 0.00 0.00 2.10
166 167 5.303333 TGTCGCAGGTATGGATGTATCTAAA 59.697 40.000 0.00 0.00 0.00 1.85
167 168 6.014584 TGTCGCAGGTATGGATGTATCTAAAT 60.015 38.462 0.00 0.00 0.00 1.40
168 169 6.311445 GTCGCAGGTATGGATGTATCTAAATG 59.689 42.308 0.00 0.00 0.00 2.32
169 170 6.014584 TCGCAGGTATGGATGTATCTAAATGT 60.015 38.462 0.00 0.00 0.00 2.71
170 171 7.177744 TCGCAGGTATGGATGTATCTAAATGTA 59.822 37.037 0.00 0.00 0.00 2.29
171 172 7.981789 CGCAGGTATGGATGTATCTAAATGTAT 59.018 37.037 0.00 0.00 0.00 2.29
172 173 9.672673 GCAGGTATGGATGTATCTAAATGTATT 57.327 33.333 0.00 0.00 0.00 1.89
198 199 9.547753 TTTAGTTCTAGATACATCCATTTCTGC 57.452 33.333 0.00 0.00 0.00 4.26
199 200 6.219473 AGTTCTAGATACATCCATTTCTGCG 58.781 40.000 0.00 0.00 0.00 5.18
200 201 6.040955 AGTTCTAGATACATCCATTTCTGCGA 59.959 38.462 0.00 0.00 0.00 5.10
201 202 5.773575 TCTAGATACATCCATTTCTGCGAC 58.226 41.667 0.00 0.00 0.00 5.19
202 203 3.384668 AGATACATCCATTTCTGCGACG 58.615 45.455 0.00 0.00 0.00 5.12
203 204 2.951457 TACATCCATTTCTGCGACGA 57.049 45.000 0.00 0.00 0.00 4.20
204 205 1.645034 ACATCCATTTCTGCGACGAG 58.355 50.000 0.00 0.00 0.00 4.18
205 206 1.066858 ACATCCATTTCTGCGACGAGT 60.067 47.619 0.00 0.00 0.00 4.18
206 207 2.165641 ACATCCATTTCTGCGACGAGTA 59.834 45.455 0.00 0.00 0.00 2.59
207 208 3.186909 CATCCATTTCTGCGACGAGTAA 58.813 45.455 0.00 0.00 0.00 2.24
208 209 3.520290 TCCATTTCTGCGACGAGTAAT 57.480 42.857 0.00 0.00 0.00 1.89
209 210 3.857052 TCCATTTCTGCGACGAGTAATT 58.143 40.909 0.00 0.00 0.00 1.40
210 211 4.250464 TCCATTTCTGCGACGAGTAATTT 58.750 39.130 0.00 0.00 0.00 1.82
211 212 4.092821 TCCATTTCTGCGACGAGTAATTTG 59.907 41.667 0.00 0.00 0.00 2.32
212 213 4.334443 CATTTCTGCGACGAGTAATTTGG 58.666 43.478 0.00 0.00 0.00 3.28
213 214 3.306917 TTCTGCGACGAGTAATTTGGA 57.693 42.857 0.00 0.00 0.00 3.53
214 215 3.306917 TCTGCGACGAGTAATTTGGAA 57.693 42.857 0.00 0.00 0.00 3.53
215 216 2.991190 TCTGCGACGAGTAATTTGGAAC 59.009 45.455 0.00 0.00 0.00 3.62
216 217 1.722464 TGCGACGAGTAATTTGGAACG 59.278 47.619 0.00 0.00 0.00 3.95
217 218 1.060122 GCGACGAGTAATTTGGAACGG 59.940 52.381 0.00 0.00 0.00 4.44
218 219 2.598589 CGACGAGTAATTTGGAACGGA 58.401 47.619 0.00 0.00 0.00 4.69
219 220 2.597305 CGACGAGTAATTTGGAACGGAG 59.403 50.000 0.00 0.00 0.00 4.63
220 221 2.928116 GACGAGTAATTTGGAACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
221 222 2.277084 CGAGTAATTTGGAACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
222 223 2.093869 CGAGTAATTTGGAACGGAGGGA 60.094 50.000 0.00 0.00 0.00 4.20
223 224 3.532542 GAGTAATTTGGAACGGAGGGAG 58.467 50.000 0.00 0.00 0.00 4.30
231 232 0.816373 GAACGGAGGGAGTAGGTGTC 59.184 60.000 0.00 0.00 0.00 3.67
274 275 7.473366 TGTCTGTAGCTAAACTAAGAGAATCG 58.527 38.462 0.00 0.00 42.67 3.34
295 296 2.477754 GAGAAAACTCGTTACAACCCCG 59.522 50.000 0.00 0.00 0.00 5.73
318 319 6.214399 CGTAAGAATTAGATGGTACCCTCAC 58.786 44.000 18.17 5.25 43.02 3.51
338 339 1.130955 GTTGCTGCGGAAATGTGTTG 58.869 50.000 0.00 0.00 0.00 3.33
340 341 1.286880 GCTGCGGAAATGTGTTGCT 59.713 52.632 0.00 0.00 0.00 3.91
351 352 9.329913 GCGGAAATGTGTTGCTATATAAATTAG 57.670 33.333 0.00 0.00 0.00 1.73
516 534 6.615088 AGTTTGAGATGACATGTTTGCATAC 58.385 36.000 0.00 0.00 33.30 2.39
553 572 5.674525 TGCAGGATGACCTATTTAGTTCTG 58.325 41.667 0.00 0.00 45.94 3.02
629 648 2.465920 CGCTCAACAACGCTCGAC 59.534 61.111 0.00 0.00 0.00 4.20
632 651 0.161870 GCTCAACAACGCTCGACTTC 59.838 55.000 0.00 0.00 0.00 3.01
751 771 0.389817 CTCGGCTTGTTCGGTGATGA 60.390 55.000 0.00 0.00 0.00 2.92
753 773 0.374758 CGGCTTGTTCGGTGATGATG 59.625 55.000 0.00 0.00 0.00 3.07
761 781 4.269183 TGTTCGGTGATGATGGCTTTATT 58.731 39.130 0.00 0.00 0.00 1.40
762 782 5.432645 TGTTCGGTGATGATGGCTTTATTA 58.567 37.500 0.00 0.00 0.00 0.98
763 783 6.061441 TGTTCGGTGATGATGGCTTTATTAT 58.939 36.000 0.00 0.00 0.00 1.28
764 784 7.220740 TGTTCGGTGATGATGGCTTTATTATA 58.779 34.615 0.00 0.00 0.00 0.98
765 785 7.882791 TGTTCGGTGATGATGGCTTTATTATAT 59.117 33.333 0.00 0.00 0.00 0.86
889 911 2.353011 CCACATGCCACAACATTCTTCC 60.353 50.000 0.00 0.00 0.00 3.46
903 925 4.829492 ACATTCTTCCAGGACTTTCCAAAG 59.171 41.667 0.00 0.00 39.61 2.77
904 926 4.788925 TTCTTCCAGGACTTTCCAAAGA 57.211 40.909 6.05 0.00 39.61 2.52
905 927 4.357918 TCTTCCAGGACTTTCCAAAGAG 57.642 45.455 6.05 0.00 39.61 2.85
906 928 2.568623 TCCAGGACTTTCCAAAGAGC 57.431 50.000 6.05 0.00 39.61 4.09
908 930 2.376518 TCCAGGACTTTCCAAAGAGCAT 59.623 45.455 6.05 0.00 39.61 3.79
910 932 2.490903 CAGGACTTTCCAAAGAGCATGG 59.509 50.000 6.05 0.00 39.61 3.66
911 933 2.108952 AGGACTTTCCAAAGAGCATGGT 59.891 45.455 6.05 0.00 39.61 3.55
913 935 3.416156 GACTTTCCAAAGAGCATGGTCT 58.584 45.455 21.55 21.55 39.31 3.85
914 936 3.152341 ACTTTCCAAAGAGCATGGTCTG 58.848 45.455 27.11 16.40 39.31 3.51
915 937 2.957402 TTCCAAAGAGCATGGTCTGT 57.043 45.000 27.11 19.86 39.09 3.41
958 988 7.201794 CCATGACTCATCAAAGTTGATTGCTAT 60.202 37.037 3.75 0.00 45.13 2.97
999 1032 2.362503 AGGGTGAGGCGACGATGA 60.363 61.111 0.00 0.00 0.00 2.92
1000 1033 1.982395 AGGGTGAGGCGACGATGAA 60.982 57.895 0.00 0.00 0.00 2.57
1001 1034 1.144057 GGGTGAGGCGACGATGAAT 59.856 57.895 0.00 0.00 0.00 2.57
1002 1035 1.154205 GGGTGAGGCGACGATGAATG 61.154 60.000 0.00 0.00 0.00 2.67
1283 1319 1.484444 AAGGGTCAGGCAGGTCAGTC 61.484 60.000 0.00 0.00 0.00 3.51
1445 1486 2.792749 GCAGAAGTAGCGAGAGTCTTC 58.207 52.381 0.00 0.00 36.50 2.87
1478 1519 5.009610 GCAGATTGTTTCCTTAACCTGTGAA 59.990 40.000 0.00 0.00 35.81 3.18
1489 1530 1.651987 ACCTGTGAACAGTGTCAACG 58.348 50.000 9.49 0.00 42.27 4.10
1490 1531 1.066430 ACCTGTGAACAGTGTCAACGT 60.066 47.619 9.49 0.00 42.27 3.99
1491 1532 2.006888 CCTGTGAACAGTGTCAACGTT 58.993 47.619 9.49 0.00 42.27 3.99
1510 1551 4.225497 GCCGAGCCAGCATTTAGT 57.775 55.556 0.00 0.00 0.00 2.24
1518 1559 2.173569 AGCCAGCATTTAGTTAGAGGGG 59.826 50.000 0.00 0.00 0.00 4.79
1536 1577 1.914108 GGGAAGTTTACCACCTAGGCT 59.086 52.381 9.30 0.00 43.14 4.58
1562 1603 6.779539 AGGGAAGCTATTGGAGAAAATATTGG 59.220 38.462 0.00 0.00 0.00 3.16
1567 1608 3.481559 TTGGAGAAAATATTGGGGGCA 57.518 42.857 0.00 0.00 0.00 5.36
1581 1622 2.269241 GGCACCTGTAGGGCAGTC 59.731 66.667 2.53 0.00 43.55 3.51
1582 1623 2.125512 GCACCTGTAGGGCAGTCG 60.126 66.667 2.53 0.00 43.55 4.18
1583 1624 2.646175 GCACCTGTAGGGCAGTCGA 61.646 63.158 2.53 0.00 43.55 4.20
1592 1658 0.820871 AGGGCAGTCGACTGAGAATC 59.179 55.000 42.03 26.07 46.59 2.52
1608 1674 8.677126 ACTGAGAATCTGTGAAATCGCAGTCA 62.677 42.308 20.06 15.58 45.63 3.41
1620 1686 1.266718 TCGCAGTCAATTTTCAGCCAC 59.733 47.619 0.00 0.00 0.00 5.01
1624 1690 3.841643 CAGTCAATTTTCAGCCACCATC 58.158 45.455 0.00 0.00 0.00 3.51
1645 1711 1.760192 GATTGCAATCCCTGTGCTCT 58.240 50.000 26.03 0.00 42.69 4.09
1649 1715 0.034670 GCAATCCCTGTGCTCTCCTT 60.035 55.000 0.00 0.00 39.00 3.36
1650 1716 1.615384 GCAATCCCTGTGCTCTCCTTT 60.615 52.381 0.00 0.00 39.00 3.11
1663 1729 3.669536 CTCTCCTTTGTCTTCAACCTCC 58.330 50.000 0.00 0.00 32.93 4.30
1665 1731 3.652869 TCTCCTTTGTCTTCAACCTCCAT 59.347 43.478 0.00 0.00 32.93 3.41
1671 1737 2.093500 TGTCTTCAACCTCCATCCATCG 60.093 50.000 0.00 0.00 0.00 3.84
1686 1752 5.008415 CCATCCATCGGATTCTTTCTTTCAG 59.992 44.000 0.00 0.00 39.79 3.02
1689 1755 7.124573 TCCATCGGATTCTTTCTTTCAGATA 57.875 36.000 0.00 0.00 0.00 1.98
1690 1756 6.986817 TCCATCGGATTCTTTCTTTCAGATAC 59.013 38.462 0.00 0.00 0.00 2.24
1739 1805 2.624364 GCCTAGAGCACTAAGTACCTCC 59.376 54.545 0.00 0.00 42.97 4.30
1750 1816 3.790089 AAGTACCTCCCCACAAAAGAG 57.210 47.619 0.00 0.00 0.00 2.85
1758 1824 3.186283 TCCCCACAAAAGAGGCTATGTA 58.814 45.455 0.00 0.00 0.00 2.29
1840 1909 9.752228 AGAAGATATATACTGAGCTTGAGATGA 57.248 33.333 0.00 0.00 0.00 2.92
1942 2015 1.742831 CACAACAATACCCATGGTCGG 59.257 52.381 11.73 0.00 37.09 4.79
1954 2027 1.355718 ATGGTCGGCAAGATGGGGAT 61.356 55.000 0.00 0.00 0.00 3.85
1958 2031 0.846015 TCGGCAAGATGGGGATGATT 59.154 50.000 0.00 0.00 0.00 2.57
2019 2092 2.047465 AGTGCTCGCTGGCTTGAG 60.047 61.111 0.00 0.00 35.30 3.02
2021 2094 4.399395 TGCTCGCTGGCTTGAGGG 62.399 66.667 3.99 0.00 32.78 4.30
2037 2110 4.008933 GGTGAGACGCTGGCCACT 62.009 66.667 0.00 0.00 0.00 4.00
2040 2113 4.008933 GAGACGCTGGCCACTGGT 62.009 66.667 0.00 0.00 0.00 4.00
2057 2130 1.202867 TGGTGCAAGATGTTGTGCCTA 60.203 47.619 14.90 3.80 40.14 3.93
2109 2182 1.134007 CATGATAGAGGTGGCCTTGCA 60.134 52.381 3.32 0.00 31.76 4.08
2142 2215 4.892934 GTGGTGAATTAGGGATTTATGGCA 59.107 41.667 0.00 0.00 0.00 4.92
2319 2392 2.364970 TGGTTTTGCCCATTTGTGAGAG 59.635 45.455 0.00 0.00 36.04 3.20
2332 2405 4.705110 TTGTGAGAGAAGAAACCCATGA 57.295 40.909 0.00 0.00 0.00 3.07
2343 2416 2.344093 AACCCATGACCTACCTGTCT 57.656 50.000 0.00 0.00 36.21 3.41
2382 2455 2.957474 CCCGATCCCATGGGTTAAATT 58.043 47.619 30.28 9.47 40.76 1.82
2386 2459 3.004315 CGATCCCATGGGTTAAATTTCCG 59.996 47.826 30.28 15.33 36.47 4.30
2393 2466 5.592688 CCATGGGTTAAATTTCCGTCTATGT 59.407 40.000 2.85 0.00 0.00 2.29
2495 2569 0.691332 AGATCATGCGGCATCATCCT 59.309 50.000 21.10 7.86 0.00 3.24
2620 2695 0.250727 GTTGGGACTTGCAGGTGCTA 60.251 55.000 19.51 11.55 42.66 3.49
2643 2720 2.303311 AGCTGTGGGACTTTTAGAGACC 59.697 50.000 0.00 0.00 39.18 3.85
2679 2756 0.839277 TGACTATGACCCATGGCTGG 59.161 55.000 6.09 0.00 42.73 4.85
2712 2789 3.384668 CACCATCATACAAGAGCCTACG 58.615 50.000 0.00 0.00 0.00 3.51
2762 2839 8.370493 TGCATGTATAAAGCAGAAGATTAGAC 57.630 34.615 0.00 0.00 33.75 2.59
2862 2940 9.801873 GTAAACAATGGACAATGCTAAATACAT 57.198 29.630 0.00 0.00 0.00 2.29
2979 3065 7.608308 TGTTTTTGAGTTTTTCATTGGAAGG 57.392 32.000 0.00 0.00 35.27 3.46
3040 3581 9.643693 CTTAGATTTATGACAGCAAATTTTGGT 57.356 29.630 7.99 7.99 43.12 3.67
3138 3679 5.167845 GTCTCAGCTCTAAGAAAAGTGGAG 58.832 45.833 0.00 0.00 0.00 3.86
3160 3701 3.761897 CAGTTGTAATTTCTGGGGTGGA 58.238 45.455 0.00 0.00 0.00 4.02
3230 3771 6.205270 GCATTCCATTTTGTTCTTGGATGTTT 59.795 34.615 0.00 0.00 39.22 2.83
3278 3819 7.591006 TCGAACTTATTGGTAACTTGTCATC 57.409 36.000 0.00 0.00 37.61 2.92
3565 4106 8.798153 CGTAAGGTAATTTCAGATGAATTTTGC 58.202 33.333 7.72 4.11 33.54 3.68
3574 4115 5.543714 TCAGATGAATTTTGCAGCACATTT 58.456 33.333 0.00 0.00 0.00 2.32
3593 4140 9.158364 GCACATTTACTGTAATATCATGTTTCG 57.842 33.333 11.11 4.66 35.91 3.46
3831 4382 5.070001 TCATTGGTTGCTACTTGCTAGTTT 58.930 37.500 6.03 0.00 43.37 2.66
3860 4411 2.767394 TGCTGCATTGCCCTTATTTGAT 59.233 40.909 6.12 0.00 0.00 2.57
3874 4427 8.138074 GCCCTTATTTGATTCCTTAAACATCTC 58.862 37.037 0.00 0.00 0.00 2.75
3981 4534 4.461992 TGTGCTAGTTAAGTCAAAACGC 57.538 40.909 0.00 0.00 32.00 4.84
3987 4540 7.801783 GTGCTAGTTAAGTCAAAACGCTTTATT 59.198 33.333 0.00 0.00 32.00 1.40
4037 4590 3.713858 TGAAAGGTGTTTGCAGTCATG 57.286 42.857 0.00 0.00 0.00 3.07
4057 4610 6.595716 GTCATGAAGTTGCTAGATTTGTAGGT 59.404 38.462 0.00 0.00 0.00 3.08
4093 4646 4.507756 ACACATGTATTCGGTCATGAATCG 59.492 41.667 11.98 11.98 42.52 3.34
4103 4656 3.466836 GGTCATGAATCGTTAGGCATGA 58.533 45.455 0.00 0.00 43.29 3.07
4104 4657 3.496130 GGTCATGAATCGTTAGGCATGAG 59.504 47.826 0.00 0.00 45.30 2.90
4105 4658 3.496130 GTCATGAATCGTTAGGCATGAGG 59.504 47.826 0.00 0.00 45.30 3.86
4107 4660 1.140852 TGAATCGTTAGGCATGAGGGG 59.859 52.381 0.00 0.00 0.00 4.79
4147 4707 6.314784 GTGGAGTTAATATGCACACAAACTC 58.685 40.000 18.56 18.56 38.41 3.01
4184 4748 7.309805 GGCATGGAGGTTAAACTGTTAGAAATT 60.310 37.037 0.00 0.00 0.00 1.82
4262 4874 6.330278 TCTATTTTGTATCACCGTCTCACAG 58.670 40.000 0.00 0.00 0.00 3.66
4383 5001 7.398829 TCACTTTGCCTATTTGTAGGATTGTA 58.601 34.615 5.70 0.00 39.60 2.41
4433 5051 4.336433 CAGGCTAATATCCCAACTGTTGTG 59.664 45.833 18.38 8.19 0.00 3.33
4460 5079 6.576185 TGGGGTATGACTCGAACTTATTTAC 58.424 40.000 0.00 0.00 0.00 2.01
4495 5114 5.464069 ACTCCAAATTAGGGGTCAAACTTT 58.536 37.500 0.00 0.00 38.16 2.66
4584 5203 4.460263 ACAACTCACTTGCCATCTTAACA 58.540 39.130 0.00 0.00 32.41 2.41
4614 5233 1.767289 ACGAGTACAAGCGTCTTGTG 58.233 50.000 25.49 15.82 35.59 3.33
4798 5417 7.617041 AGGAAAAGCAGATGTAATTAGTGAC 57.383 36.000 0.00 0.00 0.00 3.67
4834 5521 2.806244 ACTACAAAGCTGCTTGGTTACG 59.194 45.455 26.09 16.90 35.02 3.18
4849 5537 3.257375 TGGTTACGACTGTTAGCTCATGT 59.743 43.478 0.00 0.00 0.00 3.21
4895 5583 3.440173 CGTGGCCTCATCTTTTTGTGTAT 59.560 43.478 3.32 0.00 0.00 2.29
5072 5760 1.112113 TCTCGGTGCTGAGTATTCCC 58.888 55.000 7.78 0.00 37.28 3.97
5090 5778 0.034896 CCCACTGTACCCTGTGTCAC 59.965 60.000 0.00 0.00 38.47 3.67
5190 5880 9.581289 TGTTTTCTCCTCTTTCACCAATATTAA 57.419 29.630 0.00 0.00 0.00 1.40
5269 5963 8.729756 TGAATGAACATAGAGTGGTTATTTGTG 58.270 33.333 0.00 0.00 34.22 3.33
5300 5998 5.396213 CCTGCCTGCTCTCTAAACTTTAGAT 60.396 44.000 10.99 0.00 0.00 1.98
5461 6171 3.003275 ACGTGATGTGTTTAGGTTTGCAG 59.997 43.478 0.00 0.00 0.00 4.41
5562 6273 6.767524 TTACTTGACATTCACCTTTGTGTT 57.232 33.333 0.00 0.00 43.26 3.32
5575 6286 5.637387 CACCTTTGTGTTTTGCTTACACTTT 59.363 36.000 14.50 0.00 44.76 2.66
5576 6287 5.637387 ACCTTTGTGTTTTGCTTACACTTTG 59.363 36.000 14.50 6.98 44.76 2.77
5621 6333 9.139174 CACTTTTACCATAATTGATTGGACAAC 57.861 33.333 9.98 0.00 36.79 3.32
5942 6826 4.213270 CACGGCACTTTCTCTTGTCAAATA 59.787 41.667 0.00 0.00 0.00 1.40
6033 6918 4.771590 AAGATCTGATTTTGCTTTCGCA 57.228 36.364 0.00 0.00 46.24 5.10
6196 7081 6.262944 TGTTGTGTCAGCACTAGATTTTCATT 59.737 34.615 0.00 0.00 45.44 2.57
6221 7106 6.480524 TGTATGACGGTTCTTTCATTTGAG 57.519 37.500 0.00 0.00 34.28 3.02
6227 7112 8.160521 TGACGGTTCTTTCATTTGAGAATTTA 57.839 30.769 0.00 0.00 34.68 1.40
6292 7177 6.319405 GTGGTAGTTTCTTGTGGGTTTCTTAA 59.681 38.462 0.00 0.00 0.00 1.85
6314 7199 3.386726 ACATAATACTGGAACTGCGCCTA 59.613 43.478 4.18 0.00 0.00 3.93
6332 7217 5.642063 GCGCCTAGGCATTCTACAATAATAA 59.358 40.000 32.47 0.00 42.06 1.40
6335 7220 9.035607 CGCCTAGGCATTCTACAATAATAATAG 57.964 37.037 32.47 6.07 42.06 1.73
6336 7221 8.831550 GCCTAGGCATTCTACAATAATAATAGC 58.168 37.037 29.33 0.00 41.49 2.97
6367 7252 4.527509 ATCAGGATGTATCATCACCGTC 57.472 45.455 11.08 0.00 37.40 4.79
6376 7261 8.035394 GGATGTATCATCACCGTCTTTATGTAT 58.965 37.037 11.08 0.00 0.00 2.29
6421 7310 5.645067 GCTACAATGCTTGGATGCTATGATA 59.355 40.000 0.00 0.00 34.12 2.15
6433 7322 9.533253 TTGGATGCTATGATATGTTATGTATCG 57.467 33.333 0.00 0.00 32.46 2.92
6473 7366 7.963532 TCCTCAGTGAATTGAAGTTTAGTAGT 58.036 34.615 0.00 0.00 0.00 2.73
6474 7367 9.085645 TCCTCAGTGAATTGAAGTTTAGTAGTA 57.914 33.333 0.00 0.00 0.00 1.82
6475 7368 9.360093 CCTCAGTGAATTGAAGTTTAGTAGTAG 57.640 37.037 0.00 0.00 0.00 2.57
6480 7373 9.204570 GTGAATTGAAGTTTAGTAGTAGAAGCA 57.795 33.333 0.00 0.00 0.00 3.91
6523 7416 5.529581 TTTGGGTTCTCTTTGTTGGATTC 57.470 39.130 0.00 0.00 0.00 2.52
6524 7417 3.496331 TGGGTTCTCTTTGTTGGATTCC 58.504 45.455 0.00 0.00 0.00 3.01
6525 7418 3.140144 TGGGTTCTCTTTGTTGGATTCCT 59.860 43.478 3.95 0.00 0.00 3.36
6526 7419 4.152647 GGGTTCTCTTTGTTGGATTCCTT 58.847 43.478 3.95 0.00 0.00 3.36
6527 7420 4.588951 GGGTTCTCTTTGTTGGATTCCTTT 59.411 41.667 3.95 0.00 0.00 3.11
6528 7421 5.070446 GGGTTCTCTTTGTTGGATTCCTTTT 59.930 40.000 3.95 0.00 0.00 2.27
6529 7422 5.985530 GGTTCTCTTTGTTGGATTCCTTTTG 59.014 40.000 3.95 0.00 0.00 2.44
6530 7423 6.406961 GGTTCTCTTTGTTGGATTCCTTTTGT 60.407 38.462 3.95 0.00 0.00 2.83
6531 7424 6.790232 TCTCTTTGTTGGATTCCTTTTGTT 57.210 33.333 3.95 0.00 0.00 2.83
6532 7425 6.572519 TCTCTTTGTTGGATTCCTTTTGTTG 58.427 36.000 3.95 0.00 0.00 3.33
6533 7426 5.669477 TCTTTGTTGGATTCCTTTTGTTGG 58.331 37.500 3.95 0.00 0.00 3.77
6534 7427 3.467374 TGTTGGATTCCTTTTGTTGGC 57.533 42.857 3.95 0.00 0.00 4.52
6554 7460 2.587956 CTTTGTGCATGAACCGACATG 58.412 47.619 0.00 0.00 46.96 3.21
6576 7482 2.546778 GAACAGACACGACACAGGAAA 58.453 47.619 0.00 0.00 0.00 3.13
6580 7486 2.872245 CAGACACGACACAGGAAAACAT 59.128 45.455 0.00 0.00 0.00 2.71
6637 7543 8.905660 ATGATGAAGATAGGAGATGTTGAAAG 57.094 34.615 0.00 0.00 0.00 2.62
6795 7716 3.754955 CGTATCTGCGAGTGTTCACTTA 58.245 45.455 6.91 0.00 0.00 2.24
6829 8084 6.875972 TTAGTGAGCTTTCCCTTAGAGAAT 57.124 37.500 0.00 0.00 0.00 2.40
6861 8116 9.578576 AGAATTGCCATGTTACAACAGATATAT 57.421 29.630 0.84 0.00 43.04 0.86
6912 8167 9.409312 TCATGCTGTAAGTGAAAAATTGTTATG 57.591 29.630 0.00 0.00 35.30 1.90
6919 8174 9.065871 GTAAGTGAAAAATTGTTATGCTAGCAG 57.934 33.333 23.89 0.00 0.00 4.24
6961 8216 4.256920 CCAAGCTGTAGCAGAGTAATTGT 58.743 43.478 6.65 0.00 45.16 2.71
6962 8217 5.046591 ACCAAGCTGTAGCAGAGTAATTGTA 60.047 40.000 6.65 0.00 45.16 2.41
6964 8219 6.183360 CCAAGCTGTAGCAGAGTAATTGTAAC 60.183 42.308 6.65 0.00 45.16 2.50
6983 8238 7.462109 TGTAACACACTTTTTGATGATTTGC 57.538 32.000 0.00 0.00 0.00 3.68
6990 8252 4.693566 ACTTTTTGATGATTTGCCATGCAG 59.306 37.500 0.00 0.00 40.61 4.41
7004 8266 3.079960 CATGCAGCATGGAGAATTGTC 57.920 47.619 25.63 0.00 42.42 3.18
7020 8282 7.040409 GGAGAATTGTCAAGCCTAAAGAGAAAA 60.040 37.037 4.83 0.00 0.00 2.29
7027 8289 6.015434 GTCAAGCCTAAAGAGAAAATTCCCAA 60.015 38.462 0.00 0.00 0.00 4.12
7028 8290 6.725834 TCAAGCCTAAAGAGAAAATTCCCAAT 59.274 34.615 0.00 0.00 0.00 3.16
7029 8291 6.535963 AGCCTAAAGAGAAAATTCCCAATG 57.464 37.500 0.00 0.00 0.00 2.82
7030 8292 6.019108 AGCCTAAAGAGAAAATTCCCAATGT 58.981 36.000 0.00 0.00 0.00 2.71
7031 8293 6.071165 AGCCTAAAGAGAAAATTCCCAATGTG 60.071 38.462 0.00 0.00 0.00 3.21
7032 8294 6.295292 GCCTAAAGAGAAAATTCCCAATGTGT 60.295 38.462 0.00 0.00 0.00 3.72
7033 8295 7.315890 CCTAAAGAGAAAATTCCCAATGTGTC 58.684 38.462 0.00 0.00 0.00 3.67
7034 8296 6.983906 AAAGAGAAAATTCCCAATGTGTCT 57.016 33.333 0.00 0.00 0.00 3.41
7035 8297 5.972107 AGAGAAAATTCCCAATGTGTCTG 57.028 39.130 0.00 0.00 0.00 3.51
7036 8298 4.768968 AGAGAAAATTCCCAATGTGTCTGG 59.231 41.667 0.00 0.00 0.00 3.86
7037 8299 4.739793 AGAAAATTCCCAATGTGTCTGGA 58.260 39.130 0.00 0.00 35.85 3.86
7038 8300 5.336102 AGAAAATTCCCAATGTGTCTGGAT 58.664 37.500 0.00 0.00 35.85 3.41
7039 8301 5.781818 AGAAAATTCCCAATGTGTCTGGATT 59.218 36.000 0.00 0.00 35.85 3.01
7040 8302 6.270695 AGAAAATTCCCAATGTGTCTGGATTT 59.729 34.615 0.00 0.00 35.85 2.17
7041 8303 5.410355 AATTCCCAATGTGTCTGGATTTG 57.590 39.130 0.00 0.00 35.85 2.32
7042 8304 3.524095 TCCCAATGTGTCTGGATTTGT 57.476 42.857 0.00 0.00 35.85 2.83
7043 8305 3.420893 TCCCAATGTGTCTGGATTTGTC 58.579 45.455 0.00 0.00 35.85 3.18
7044 8306 2.162208 CCCAATGTGTCTGGATTTGTCG 59.838 50.000 0.00 0.00 35.85 4.35
7045 8307 3.073678 CCAATGTGTCTGGATTTGTCGA 58.926 45.455 0.00 0.00 35.85 4.20
7046 8308 3.120199 CCAATGTGTCTGGATTTGTCGAC 60.120 47.826 9.11 9.11 35.85 4.20
7047 8309 2.900716 TGTGTCTGGATTTGTCGACA 57.099 45.000 15.76 15.76 34.33 4.35
7048 8310 2.754472 TGTGTCTGGATTTGTCGACAG 58.246 47.619 19.11 6.11 37.10 3.51
7049 8311 2.364002 TGTGTCTGGATTTGTCGACAGA 59.636 45.455 19.11 15.36 37.10 3.41
7050 8312 3.181470 TGTGTCTGGATTTGTCGACAGAA 60.181 43.478 19.11 15.54 41.17 3.02
7051 8313 3.430218 GTGTCTGGATTTGTCGACAGAAG 59.570 47.826 19.11 9.00 41.17 2.85
7052 8314 3.320826 TGTCTGGATTTGTCGACAGAAGA 59.679 43.478 19.11 11.25 41.17 2.87
7053 8315 4.202212 TGTCTGGATTTGTCGACAGAAGAA 60.202 41.667 19.11 10.61 41.17 2.52
7054 8316 4.750098 GTCTGGATTTGTCGACAGAAGAAA 59.250 41.667 19.11 10.21 41.17 2.52
7055 8317 5.236478 GTCTGGATTTGTCGACAGAAGAAAA 59.764 40.000 19.11 9.45 41.17 2.29
7056 8318 5.997746 TCTGGATTTGTCGACAGAAGAAAAT 59.002 36.000 19.11 13.98 37.06 1.82
7057 8319 6.486657 TCTGGATTTGTCGACAGAAGAAAATT 59.513 34.615 19.11 0.00 37.06 1.82
7058 8320 6.437928 TGGATTTGTCGACAGAAGAAAATTG 58.562 36.000 19.11 0.00 0.00 2.32
7059 8321 6.039270 TGGATTTGTCGACAGAAGAAAATTGT 59.961 34.615 19.11 0.00 0.00 2.71
7060 8322 6.360681 GGATTTGTCGACAGAAGAAAATTGTG 59.639 38.462 19.11 0.00 0.00 3.33
7061 8323 4.811555 TGTCGACAGAAGAAAATTGTGG 57.188 40.909 15.76 0.00 0.00 4.17
7062 8324 4.196193 TGTCGACAGAAGAAAATTGTGGT 58.804 39.130 15.76 0.00 0.00 4.16
7063 8325 4.035091 TGTCGACAGAAGAAAATTGTGGTG 59.965 41.667 15.76 0.00 0.00 4.17
7064 8326 3.003275 TCGACAGAAGAAAATTGTGGTGC 59.997 43.478 0.00 0.00 0.00 5.01
7065 8327 3.003689 CGACAGAAGAAAATTGTGGTGCT 59.996 43.478 0.00 0.00 0.00 4.40
7066 8328 4.213270 CGACAGAAGAAAATTGTGGTGCTA 59.787 41.667 0.00 0.00 0.00 3.49
7067 8329 5.277779 CGACAGAAGAAAATTGTGGTGCTAA 60.278 40.000 0.00 0.00 0.00 3.09
7068 8330 6.463995 ACAGAAGAAAATTGTGGTGCTAAA 57.536 33.333 0.00 0.00 0.00 1.85
7069 8331 7.054491 ACAGAAGAAAATTGTGGTGCTAAAT 57.946 32.000 0.00 0.00 0.00 1.40
7070 8332 7.500141 ACAGAAGAAAATTGTGGTGCTAAATT 58.500 30.769 0.00 0.00 0.00 1.82
7071 8333 7.986889 ACAGAAGAAAATTGTGGTGCTAAATTT 59.013 29.630 0.00 0.00 35.55 1.82
7072 8334 9.474920 CAGAAGAAAATTGTGGTGCTAAATTTA 57.525 29.630 0.00 0.00 33.51 1.40
7075 8337 8.831715 AGAAAATTGTGGTGCTAAATTTAAGG 57.168 30.769 0.00 0.00 33.51 2.69
7076 8338 8.646900 AGAAAATTGTGGTGCTAAATTTAAGGA 58.353 29.630 0.00 0.00 33.51 3.36
7077 8339 9.267084 GAAAATTGTGGTGCTAAATTTAAGGAA 57.733 29.630 0.00 0.00 33.51 3.36
7078 8340 9.620259 AAAATTGTGGTGCTAAATTTAAGGAAA 57.380 25.926 0.00 0.00 33.51 3.13
7079 8341 8.601845 AATTGTGGTGCTAAATTTAAGGAAAC 57.398 30.769 0.00 0.00 0.00 2.78
7080 8342 6.716934 TGTGGTGCTAAATTTAAGGAAACA 57.283 33.333 0.00 0.00 0.00 2.83
7081 8343 6.508777 TGTGGTGCTAAATTTAAGGAAACAC 58.491 36.000 6.65 6.65 0.00 3.32
7082 8344 5.627780 GTGGTGCTAAATTTAAGGAAACACG 59.372 40.000 0.00 0.00 0.00 4.49
7083 8345 5.299782 TGGTGCTAAATTTAAGGAAACACGT 59.700 36.000 0.00 0.00 0.00 4.49
7084 8346 5.854866 GGTGCTAAATTTAAGGAAACACGTC 59.145 40.000 0.00 0.00 0.00 4.34
7085 8347 6.293790 GGTGCTAAATTTAAGGAAACACGTCT 60.294 38.462 0.00 0.00 0.00 4.18
7086 8348 6.795593 GTGCTAAATTTAAGGAAACACGTCTC 59.204 38.462 0.00 0.00 0.00 3.36
7087 8349 6.708949 TGCTAAATTTAAGGAAACACGTCTCT 59.291 34.615 0.00 0.00 0.00 3.10
7088 8350 7.227910 TGCTAAATTTAAGGAAACACGTCTCTT 59.772 33.333 0.00 0.00 0.00 2.85
7089 8351 7.534239 GCTAAATTTAAGGAAACACGTCTCTTG 59.466 37.037 0.00 0.00 0.00 3.02
7090 8352 4.806342 TTTAAGGAAACACGTCTCTTGC 57.194 40.909 0.00 0.00 0.00 4.01
7091 8353 2.622064 AAGGAAACACGTCTCTTGCT 57.378 45.000 0.00 0.00 0.00 3.91
7092 8354 2.622064 AGGAAACACGTCTCTTGCTT 57.378 45.000 0.00 0.00 0.00 3.91
7093 8355 2.919228 AGGAAACACGTCTCTTGCTTT 58.081 42.857 0.00 0.00 0.00 3.51
7094 8356 2.614057 AGGAAACACGTCTCTTGCTTTG 59.386 45.455 0.00 0.00 0.00 2.77
7095 8357 2.612212 GGAAACACGTCTCTTGCTTTGA 59.388 45.455 0.00 0.00 0.00 2.69
7096 8358 3.303395 GGAAACACGTCTCTTGCTTTGAG 60.303 47.826 0.00 0.00 0.00 3.02
7097 8359 2.890808 ACACGTCTCTTGCTTTGAGA 57.109 45.000 0.00 0.00 38.13 3.27
7098 8360 3.393089 ACACGTCTCTTGCTTTGAGAT 57.607 42.857 7.04 0.00 41.79 2.75
7099 8361 3.733337 ACACGTCTCTTGCTTTGAGATT 58.267 40.909 7.04 0.00 41.79 2.40
7100 8362 3.743396 ACACGTCTCTTGCTTTGAGATTC 59.257 43.478 7.04 0.00 41.79 2.52
7101 8363 2.989840 ACGTCTCTTGCTTTGAGATTCG 59.010 45.455 7.04 8.84 41.79 3.34
7102 8364 2.989840 CGTCTCTTGCTTTGAGATTCGT 59.010 45.455 7.04 0.00 41.79 3.85
7103 8365 4.166523 CGTCTCTTGCTTTGAGATTCGTA 58.833 43.478 7.04 0.00 41.79 3.43
7104 8366 4.030753 CGTCTCTTGCTTTGAGATTCGTAC 59.969 45.833 7.04 0.00 41.79 3.67
7105 8367 4.923871 GTCTCTTGCTTTGAGATTCGTACA 59.076 41.667 7.04 0.00 41.79 2.90
7106 8368 4.923871 TCTCTTGCTTTGAGATTCGTACAC 59.076 41.667 0.00 0.00 35.86 2.90
7107 8369 4.627058 TCTTGCTTTGAGATTCGTACACA 58.373 39.130 0.00 0.00 0.00 3.72
7108 8370 5.053811 TCTTGCTTTGAGATTCGTACACAA 58.946 37.500 0.00 0.00 0.00 3.33
7109 8371 5.525745 TCTTGCTTTGAGATTCGTACACAAA 59.474 36.000 0.00 0.00 0.00 2.83
7110 8372 5.342806 TGCTTTGAGATTCGTACACAAAG 57.657 39.130 0.00 0.00 43.38 2.77
7111 8373 5.053811 TGCTTTGAGATTCGTACACAAAGA 58.946 37.500 21.19 11.22 43.29 2.52
7112 8374 5.700832 TGCTTTGAGATTCGTACACAAAGAT 59.299 36.000 21.19 0.00 43.29 2.40
7113 8375 6.204688 TGCTTTGAGATTCGTACACAAAGATT 59.795 34.615 21.19 0.00 43.29 2.40
7114 8376 6.521133 GCTTTGAGATTCGTACACAAAGATTG 59.479 38.462 21.19 0.00 43.29 2.67
7115 8377 7.571244 GCTTTGAGATTCGTACACAAAGATTGA 60.571 37.037 21.19 0.00 43.29 2.57
7116 8378 7.722795 TTGAGATTCGTACACAAAGATTGAA 57.277 32.000 0.00 0.00 0.00 2.69
7117 8379 7.905604 TGAGATTCGTACACAAAGATTGAAT 57.094 32.000 0.00 0.00 0.00 2.57
7118 8380 7.742151 TGAGATTCGTACACAAAGATTGAATG 58.258 34.615 0.00 0.00 0.00 2.67
7119 8381 7.387673 TGAGATTCGTACACAAAGATTGAATGT 59.612 33.333 0.00 0.00 0.00 2.71
7121 8383 5.029650 TCGTACACAAAGATTGAATGTGC 57.970 39.130 5.14 0.00 46.42 4.57
7122 8384 4.083537 TCGTACACAAAGATTGAATGTGCC 60.084 41.667 5.14 0.00 46.42 5.01
7123 8385 4.320129 CGTACACAAAGATTGAATGTGCCA 60.320 41.667 5.14 0.00 46.42 4.92
7124 8386 3.981211 ACACAAAGATTGAATGTGCCAC 58.019 40.909 5.14 0.00 46.42 5.01
7125 8387 3.384146 ACACAAAGATTGAATGTGCCACA 59.616 39.130 0.00 0.00 46.42 4.17
7126 8388 4.039488 ACACAAAGATTGAATGTGCCACAT 59.961 37.500 4.03 4.03 46.42 3.21
7127 8389 5.243507 ACACAAAGATTGAATGTGCCACATA 59.756 36.000 11.38 0.00 46.42 2.29
7128 8390 5.803461 CACAAAGATTGAATGTGCCACATAG 59.197 40.000 11.38 0.00 37.97 2.23
7129 8391 4.644103 AAGATTGAATGTGCCACATAGC 57.356 40.909 11.38 7.18 37.97 2.97
7130 8392 3.623703 AGATTGAATGTGCCACATAGCA 58.376 40.909 11.38 9.77 37.97 3.49
7131 8393 4.212716 AGATTGAATGTGCCACATAGCAT 58.787 39.130 11.38 3.12 46.24 3.79
7132 8394 4.647853 AGATTGAATGTGCCACATAGCATT 59.352 37.500 11.38 8.85 46.24 3.56
7133 8395 4.804868 TTGAATGTGCCACATAGCATTT 57.195 36.364 11.38 0.00 46.24 2.32
7134 8396 4.112716 TGAATGTGCCACATAGCATTTG 57.887 40.909 11.38 0.00 46.24 2.32
7135 8397 2.589798 ATGTGCCACATAGCATTTGC 57.410 45.000 8.96 0.00 46.24 3.68
7164 8426 6.471233 AAAAGATCCTATGAGATGACGTCA 57.529 37.500 22.48 22.48 0.00 4.35
7165 8427 6.471233 AAAGATCCTATGAGATGACGTCAA 57.529 37.500 24.13 6.18 0.00 3.18
7166 8428 6.471233 AAGATCCTATGAGATGACGTCAAA 57.529 37.500 24.13 9.15 0.00 2.69
7167 8429 6.662865 AGATCCTATGAGATGACGTCAAAT 57.337 37.500 24.13 14.13 0.00 2.32
7168 8430 7.060383 AGATCCTATGAGATGACGTCAAATT 57.940 36.000 24.13 10.94 0.00 1.82
7169 8431 6.927936 AGATCCTATGAGATGACGTCAAATTG 59.072 38.462 24.13 13.68 0.00 2.32
7170 8432 5.977635 TCCTATGAGATGACGTCAAATTGT 58.022 37.500 24.13 5.11 0.00 2.71
7171 8433 6.406370 TCCTATGAGATGACGTCAAATTGTT 58.594 36.000 24.13 4.23 0.00 2.83
7172 8434 7.552459 TCCTATGAGATGACGTCAAATTGTTA 58.448 34.615 24.13 9.41 0.00 2.41
7173 8435 7.706607 TCCTATGAGATGACGTCAAATTGTTAG 59.293 37.037 24.13 17.26 0.00 2.34
7174 8436 5.530519 TGAGATGACGTCAAATTGTTAGC 57.469 39.130 24.13 0.00 0.00 3.09
7175 8437 4.994217 TGAGATGACGTCAAATTGTTAGCA 59.006 37.500 24.13 7.82 0.00 3.49
7176 8438 5.643348 TGAGATGACGTCAAATTGTTAGCAT 59.357 36.000 24.13 0.14 0.00 3.79
7177 8439 6.149308 TGAGATGACGTCAAATTGTTAGCATT 59.851 34.615 24.13 0.00 0.00 3.56
7178 8440 6.546395 AGATGACGTCAAATTGTTAGCATTC 58.454 36.000 24.13 10.46 0.00 2.67
7179 8441 5.681337 TGACGTCAAATTGTTAGCATTCA 57.319 34.783 17.62 0.00 0.00 2.57
7180 8442 5.448438 TGACGTCAAATTGTTAGCATTCAC 58.552 37.500 17.62 0.00 0.00 3.18
7181 8443 5.008118 TGACGTCAAATTGTTAGCATTCACA 59.992 36.000 17.62 0.00 0.00 3.58
7182 8444 5.826586 ACGTCAAATTGTTAGCATTCACAA 58.173 33.333 0.00 0.00 37.31 3.33
7183 8445 6.269315 ACGTCAAATTGTTAGCATTCACAAA 58.731 32.000 0.00 0.00 36.50 2.83
7184 8446 6.417635 ACGTCAAATTGTTAGCATTCACAAAG 59.582 34.615 0.00 0.00 36.50 2.77
7185 8447 6.129115 CGTCAAATTGTTAGCATTCACAAAGG 60.129 38.462 0.00 0.00 36.50 3.11
7186 8448 6.146021 GTCAAATTGTTAGCATTCACAAAGGG 59.854 38.462 0.00 0.00 36.50 3.95
7187 8449 6.041409 TCAAATTGTTAGCATTCACAAAGGGA 59.959 34.615 0.00 0.00 36.50 4.20
7188 8450 6.418057 AATTGTTAGCATTCACAAAGGGAA 57.582 33.333 0.00 0.00 36.50 3.97
7189 8451 5.860941 TTGTTAGCATTCACAAAGGGAAA 57.139 34.783 0.00 0.00 29.81 3.13
7190 8452 5.860941 TGTTAGCATTCACAAAGGGAAAA 57.139 34.783 0.00 0.00 0.00 2.29
7191 8453 6.227298 TGTTAGCATTCACAAAGGGAAAAA 57.773 33.333 0.00 0.00 0.00 1.94
7192 8454 6.045955 TGTTAGCATTCACAAAGGGAAAAAC 58.954 36.000 0.00 0.00 0.00 2.43
7193 8455 4.751767 AGCATTCACAAAGGGAAAAACA 57.248 36.364 0.00 0.00 0.00 2.83
7194 8456 5.096443 AGCATTCACAAAGGGAAAAACAA 57.904 34.783 0.00 0.00 0.00 2.83
7195 8457 5.495640 AGCATTCACAAAGGGAAAAACAAA 58.504 33.333 0.00 0.00 0.00 2.83
7196 8458 5.942826 AGCATTCACAAAGGGAAAAACAAAA 59.057 32.000 0.00 0.00 0.00 2.44
7197 8459 6.027131 GCATTCACAAAGGGAAAAACAAAAC 58.973 36.000 0.00 0.00 0.00 2.43
7198 8460 6.348868 GCATTCACAAAGGGAAAAACAAAACA 60.349 34.615 0.00 0.00 0.00 2.83
7199 8461 6.793492 TTCACAAAGGGAAAAACAAAACAG 57.207 33.333 0.00 0.00 0.00 3.16
7200 8462 5.859495 TCACAAAGGGAAAAACAAAACAGT 58.141 33.333 0.00 0.00 0.00 3.55
7201 8463 5.929415 TCACAAAGGGAAAAACAAAACAGTC 59.071 36.000 0.00 0.00 0.00 3.51
7202 8464 4.926832 ACAAAGGGAAAAACAAAACAGTCG 59.073 37.500 0.00 0.00 0.00 4.18
7203 8465 3.793797 AGGGAAAAACAAAACAGTCGG 57.206 42.857 0.00 0.00 0.00 4.79
7204 8466 2.159156 AGGGAAAAACAAAACAGTCGGC 60.159 45.455 0.00 0.00 0.00 5.54
7205 8467 1.849829 GGAAAAACAAAACAGTCGGCG 59.150 47.619 0.00 0.00 0.00 6.46
7206 8468 1.849829 GAAAAACAAAACAGTCGGCGG 59.150 47.619 7.21 0.00 0.00 6.13
7207 8469 1.096416 AAAACAAAACAGTCGGCGGA 58.904 45.000 7.21 0.00 0.00 5.54
7208 8470 1.314730 AAACAAAACAGTCGGCGGAT 58.685 45.000 7.21 0.00 0.00 4.18
7209 8471 0.872388 AACAAAACAGTCGGCGGATC 59.128 50.000 7.21 0.00 0.00 3.36
7210 8472 0.953960 ACAAAACAGTCGGCGGATCC 60.954 55.000 7.21 0.00 0.00 3.36
7211 8473 1.376812 AAAACAGTCGGCGGATCCC 60.377 57.895 7.21 0.00 0.00 3.85
7212 8474 1.838073 AAAACAGTCGGCGGATCCCT 61.838 55.000 7.21 0.00 0.00 4.20
7213 8475 1.838073 AAACAGTCGGCGGATCCCTT 61.838 55.000 7.21 0.00 0.00 3.95
7214 8476 1.838073 AACAGTCGGCGGATCCCTTT 61.838 55.000 7.21 0.00 0.00 3.11
7215 8477 1.078426 CAGTCGGCGGATCCCTTTT 60.078 57.895 7.21 0.00 0.00 2.27
7216 8478 0.676782 CAGTCGGCGGATCCCTTTTT 60.677 55.000 7.21 0.00 0.00 1.94
7232 8494 2.270275 TTTTTAATCCATGCGTGCGG 57.730 45.000 0.00 0.00 0.00 5.69
7233 8495 0.453793 TTTTAATCCATGCGTGCGGG 59.546 50.000 0.00 0.00 0.00 6.13
7234 8496 1.380403 TTTAATCCATGCGTGCGGGG 61.380 55.000 0.00 0.00 0.00 5.73
7235 8497 3.765894 TAATCCATGCGTGCGGGGG 62.766 63.158 0.00 0.00 0.00 5.40
7253 8515 3.411517 CCCCGGCCTCATCCACTT 61.412 66.667 0.00 0.00 0.00 3.16
7254 8516 2.190578 CCCGGCCTCATCCACTTC 59.809 66.667 0.00 0.00 0.00 3.01
7255 8517 2.190578 CCGGCCTCATCCACTTCC 59.809 66.667 0.00 0.00 0.00 3.46
7256 8518 2.669133 CCGGCCTCATCCACTTCCA 61.669 63.158 0.00 0.00 0.00 3.53
7257 8519 1.450312 CGGCCTCATCCACTTCCAC 60.450 63.158 0.00 0.00 0.00 4.02
7258 8520 1.903877 CGGCCTCATCCACTTCCACT 61.904 60.000 0.00 0.00 0.00 4.00
7259 8521 0.329596 GGCCTCATCCACTTCCACTT 59.670 55.000 0.00 0.00 0.00 3.16
7260 8522 1.680249 GGCCTCATCCACTTCCACTTC 60.680 57.143 0.00 0.00 0.00 3.01
7261 8523 1.680249 GCCTCATCCACTTCCACTTCC 60.680 57.143 0.00 0.00 0.00 3.46
7262 8524 1.630369 CCTCATCCACTTCCACTTCCA 59.370 52.381 0.00 0.00 0.00 3.53
7263 8525 2.240667 CCTCATCCACTTCCACTTCCAT 59.759 50.000 0.00 0.00 0.00 3.41
7264 8526 3.539604 CTCATCCACTTCCACTTCCATC 58.460 50.000 0.00 0.00 0.00 3.51
7265 8527 2.239654 TCATCCACTTCCACTTCCATCC 59.760 50.000 0.00 0.00 0.00 3.51
7266 8528 1.741028 TCCACTTCCACTTCCATCCA 58.259 50.000 0.00 0.00 0.00 3.41
7267 8529 1.351017 TCCACTTCCACTTCCATCCAC 59.649 52.381 0.00 0.00 0.00 4.02
7268 8530 1.614317 CCACTTCCACTTCCATCCACC 60.614 57.143 0.00 0.00 0.00 4.61
7269 8531 1.352352 CACTTCCACTTCCATCCACCT 59.648 52.381 0.00 0.00 0.00 4.00
7270 8532 1.630878 ACTTCCACTTCCATCCACCTC 59.369 52.381 0.00 0.00 0.00 3.85
7271 8533 1.912043 CTTCCACTTCCATCCACCTCT 59.088 52.381 0.00 0.00 0.00 3.69
7272 8534 1.279496 TCCACTTCCATCCACCTCTG 58.721 55.000 0.00 0.00 0.00 3.35
7273 8535 0.393537 CCACTTCCATCCACCTCTGC 60.394 60.000 0.00 0.00 0.00 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
99 100 9.856488 GGAGTAGTTCCAAAGAATTATTTTTCC 57.144 33.333 0.00 0.00 46.01 3.13
129 130 2.093783 CCTGCGACAAGTAATTCGGAAC 59.906 50.000 0.00 0.00 35.02 3.62
130 131 2.289195 ACCTGCGACAAGTAATTCGGAA 60.289 45.455 0.00 0.00 35.02 4.30
131 132 1.274167 ACCTGCGACAAGTAATTCGGA 59.726 47.619 0.00 0.00 35.73 4.55
132 133 1.722011 ACCTGCGACAAGTAATTCGG 58.278 50.000 0.00 0.00 35.73 4.30
133 134 3.245284 CCATACCTGCGACAAGTAATTCG 59.755 47.826 0.00 0.00 38.31 3.34
134 135 4.439057 TCCATACCTGCGACAAGTAATTC 58.561 43.478 0.00 0.00 0.00 2.17
135 136 4.481368 TCCATACCTGCGACAAGTAATT 57.519 40.909 0.00 0.00 0.00 1.40
136 137 4.141711 ACATCCATACCTGCGACAAGTAAT 60.142 41.667 0.00 0.00 0.00 1.89
137 138 3.196901 ACATCCATACCTGCGACAAGTAA 59.803 43.478 0.00 0.00 0.00 2.24
138 139 2.764010 ACATCCATACCTGCGACAAGTA 59.236 45.455 0.00 0.00 0.00 2.24
139 140 1.555075 ACATCCATACCTGCGACAAGT 59.445 47.619 0.00 0.00 0.00 3.16
140 141 2.315925 ACATCCATACCTGCGACAAG 57.684 50.000 0.00 0.00 0.00 3.16
141 142 3.641436 AGATACATCCATACCTGCGACAA 59.359 43.478 0.00 0.00 0.00 3.18
142 143 3.230976 AGATACATCCATACCTGCGACA 58.769 45.455 0.00 0.00 0.00 4.35
143 144 3.944055 AGATACATCCATACCTGCGAC 57.056 47.619 0.00 0.00 0.00 5.19
144 145 6.014584 ACATTTAGATACATCCATACCTGCGA 60.015 38.462 0.00 0.00 0.00 5.10
145 146 6.166279 ACATTTAGATACATCCATACCTGCG 58.834 40.000 0.00 0.00 0.00 5.18
146 147 9.672673 AATACATTTAGATACATCCATACCTGC 57.327 33.333 0.00 0.00 0.00 4.85
172 173 9.547753 GCAGAAATGGATGTATCTAGAACTAAA 57.452 33.333 0.00 0.00 0.00 1.85
173 174 7.867909 CGCAGAAATGGATGTATCTAGAACTAA 59.132 37.037 0.00 0.00 0.00 2.24
174 175 7.230712 TCGCAGAAATGGATGTATCTAGAACTA 59.769 37.037 0.00 0.00 0.00 2.24
175 176 6.040955 TCGCAGAAATGGATGTATCTAGAACT 59.959 38.462 0.00 0.00 0.00 3.01
176 177 6.144724 GTCGCAGAAATGGATGTATCTAGAAC 59.855 42.308 0.00 0.00 39.69 3.01
177 178 6.216569 GTCGCAGAAATGGATGTATCTAGAA 58.783 40.000 0.00 0.00 39.69 2.10
178 179 5.562890 CGTCGCAGAAATGGATGTATCTAGA 60.563 44.000 0.00 0.00 39.69 2.43
179 180 4.618912 CGTCGCAGAAATGGATGTATCTAG 59.381 45.833 0.00 0.00 39.69 2.43
180 181 4.277423 TCGTCGCAGAAATGGATGTATCTA 59.723 41.667 0.00 0.00 39.69 1.98
181 182 3.068165 TCGTCGCAGAAATGGATGTATCT 59.932 43.478 0.00 0.00 39.69 1.98
182 183 3.381045 TCGTCGCAGAAATGGATGTATC 58.619 45.455 0.00 0.00 39.69 2.24
183 184 3.181475 ACTCGTCGCAGAAATGGATGTAT 60.181 43.478 0.00 0.00 39.69 2.29
184 185 2.165641 ACTCGTCGCAGAAATGGATGTA 59.834 45.455 0.00 0.00 39.69 2.29
185 186 1.066858 ACTCGTCGCAGAAATGGATGT 60.067 47.619 0.00 0.00 39.69 3.06
186 187 1.645034 ACTCGTCGCAGAAATGGATG 58.355 50.000 0.00 0.00 39.69 3.51
187 188 3.520290 TTACTCGTCGCAGAAATGGAT 57.480 42.857 0.00 0.00 39.69 3.41
188 189 3.520290 ATTACTCGTCGCAGAAATGGA 57.480 42.857 0.00 0.00 39.69 3.41
189 190 4.334443 CAAATTACTCGTCGCAGAAATGG 58.666 43.478 0.00 0.00 39.69 3.16
190 191 4.092821 TCCAAATTACTCGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
191 192 4.250464 TCCAAATTACTCGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
192 193 3.655486 TCCAAATTACTCGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
193 194 3.306917 TCCAAATTACTCGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
194 195 2.991190 GTTCCAAATTACTCGTCGCAGA 59.009 45.455 0.00 0.00 0.00 4.26
195 196 2.222508 CGTTCCAAATTACTCGTCGCAG 60.223 50.000 0.00 0.00 0.00 5.18
196 197 1.722464 CGTTCCAAATTACTCGTCGCA 59.278 47.619 0.00 0.00 0.00 5.10
197 198 1.060122 CCGTTCCAAATTACTCGTCGC 59.940 52.381 0.00 0.00 0.00 5.19
198 199 2.597305 CTCCGTTCCAAATTACTCGTCG 59.403 50.000 0.00 0.00 0.00 5.12
199 200 2.928116 CCTCCGTTCCAAATTACTCGTC 59.072 50.000 0.00 0.00 0.00 4.20
200 201 2.354403 CCCTCCGTTCCAAATTACTCGT 60.354 50.000 0.00 0.00 0.00 4.18
201 202 2.093869 TCCCTCCGTTCCAAATTACTCG 60.094 50.000 0.00 0.00 0.00 4.18
202 203 3.055312 ACTCCCTCCGTTCCAAATTACTC 60.055 47.826 0.00 0.00 0.00 2.59
203 204 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
204 205 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
205 206 3.453353 CCTACTCCCTCCGTTCCAAATTA 59.547 47.826 0.00 0.00 0.00 1.40
206 207 2.238898 CCTACTCCCTCCGTTCCAAATT 59.761 50.000 0.00 0.00 0.00 1.82
207 208 1.838077 CCTACTCCCTCCGTTCCAAAT 59.162 52.381 0.00 0.00 0.00 2.32
208 209 1.272807 CCTACTCCCTCCGTTCCAAA 58.727 55.000 0.00 0.00 0.00 3.28
209 210 0.115745 ACCTACTCCCTCCGTTCCAA 59.884 55.000 0.00 0.00 0.00 3.53
210 211 0.613853 CACCTACTCCCTCCGTTCCA 60.614 60.000 0.00 0.00 0.00 3.53
211 212 0.614134 ACACCTACTCCCTCCGTTCC 60.614 60.000 0.00 0.00 0.00 3.62
212 213 0.816373 GACACCTACTCCCTCCGTTC 59.184 60.000 0.00 0.00 0.00 3.95
213 214 0.113776 TGACACCTACTCCCTCCGTT 59.886 55.000 0.00 0.00 0.00 4.44
214 215 0.335361 ATGACACCTACTCCCTCCGT 59.665 55.000 0.00 0.00 0.00 4.69
215 216 0.747255 CATGACACCTACTCCCTCCG 59.253 60.000 0.00 0.00 0.00 4.63
216 217 2.160721 TCATGACACCTACTCCCTCC 57.839 55.000 0.00 0.00 0.00 4.30
217 218 5.871396 TTAATCATGACACCTACTCCCTC 57.129 43.478 0.00 0.00 0.00 4.30
218 219 6.831664 ATTTAATCATGACACCTACTCCCT 57.168 37.500 0.00 0.00 0.00 4.20
219 220 8.974060 TTAATTTAATCATGACACCTACTCCC 57.026 34.615 0.00 0.00 0.00 4.30
274 275 2.477754 CGGGGTTGTAACGAGTTTTCTC 59.522 50.000 0.00 0.00 43.01 2.87
318 319 0.317770 AACACATTTCCGCAGCAACG 60.318 50.000 0.00 0.00 0.00 4.10
529 548 5.757320 CAGAACTAAATAGGTCATCCTGCAG 59.243 44.000 6.78 6.78 42.47 4.41
553 572 9.884465 GCCATATTCTTTGTGTAGAAATCATAC 57.116 33.333 0.00 0.00 37.66 2.39
612 631 1.548973 AAGTCGAGCGTTGTTGAGCG 61.549 55.000 0.00 0.00 38.61 5.03
711 731 7.576098 GCCGAGAAATATACTCCCTCTCTAAAG 60.576 44.444 0.00 0.00 32.13 1.85
716 736 4.083565 AGCCGAGAAATATACTCCCTCTC 58.916 47.826 0.00 0.00 0.00 3.20
723 743 4.142004 ACCGAACAAGCCGAGAAATATACT 60.142 41.667 0.00 0.00 0.00 2.12
728 748 1.156736 CACCGAACAAGCCGAGAAAT 58.843 50.000 0.00 0.00 0.00 2.17
732 752 0.389817 TCATCACCGAACAAGCCGAG 60.390 55.000 0.00 0.00 0.00 4.63
781 801 8.850454 ATTTGAAAATATACGACGAAAATGGG 57.150 30.769 0.00 0.00 0.00 4.00
826 848 6.034577 TCGATAATGTGCTTCGTTGTTTCTAG 59.965 38.462 0.00 0.00 34.60 2.43
827 849 5.865013 TCGATAATGTGCTTCGTTGTTTCTA 59.135 36.000 0.00 0.00 34.60 2.10
828 850 4.688879 TCGATAATGTGCTTCGTTGTTTCT 59.311 37.500 0.00 0.00 34.60 2.52
873 895 1.144708 TCCTGGAAGAATGTTGTGGCA 59.855 47.619 0.00 0.00 34.07 4.92
889 911 2.490903 CCATGCTCTTTGGAAAGTCCTG 59.509 50.000 0.00 0.00 37.46 3.86
958 988 8.783093 CCTGTTCGGCATTATATATTTTTCAGA 58.217 33.333 0.00 0.00 0.00 3.27
999 1032 2.892025 GCCCATTGACAGGCTCATT 58.108 52.632 0.00 0.00 46.14 2.57
1000 1033 4.672251 GCCCATTGACAGGCTCAT 57.328 55.556 0.00 0.00 46.14 2.90
1037 1070 2.033602 GGTGGTGTAGGTGGTGCC 59.966 66.667 0.00 0.00 37.58 5.01
1121 1157 3.195002 CGTATGCGCAGGTGGTGG 61.195 66.667 18.32 0.00 0.00 4.61
1122 1158 3.195002 CCGTATGCGCAGGTGGTG 61.195 66.667 18.32 1.88 36.67 4.17
1283 1319 4.148825 AGCTAAGACGGGCGGCTG 62.149 66.667 17.49 17.49 31.22 4.85
1337 1373 1.741770 GCCAGTCCAGCACCTAACG 60.742 63.158 0.00 0.00 0.00 3.18
1445 1486 2.351738 GGAAACAATCTGCTTCAACCCG 60.352 50.000 0.00 0.00 0.00 5.28
1478 1519 2.177580 CGGCCAACGTTGACACTGT 61.178 57.895 29.35 0.00 37.93 3.55
1501 1542 5.780958 AACTTCCCCTCTAACTAAATGCT 57.219 39.130 0.00 0.00 0.00 3.79
1510 1551 3.878086 AGGTGGTAAACTTCCCCTCTAA 58.122 45.455 0.00 0.00 0.00 2.10
1518 1559 3.134262 CCCTAGCCTAGGTGGTAAACTTC 59.866 52.174 16.54 0.00 44.73 3.01
1536 1577 7.944554 CCAATATTTTCTCCAATAGCTTCCCTA 59.055 37.037 0.00 0.00 0.00 3.53
1540 1581 6.015095 CCCCCAATATTTTCTCCAATAGCTTC 60.015 42.308 0.00 0.00 0.00 3.86
1562 1603 4.115199 CTGCCCTACAGGTGCCCC 62.115 72.222 6.36 0.00 43.19 5.80
1581 1622 3.000277 GCGATTTCACAGATTCTCAGTCG 60.000 47.826 0.00 0.00 0.00 4.18
1582 1623 3.928992 TGCGATTTCACAGATTCTCAGTC 59.071 43.478 0.00 0.00 0.00 3.51
1583 1624 3.930336 TGCGATTTCACAGATTCTCAGT 58.070 40.909 0.00 0.00 0.00 3.41
1592 1658 5.214417 TGAAAATTGACTGCGATTTCACAG 58.786 37.500 0.00 0.00 37.17 3.66
1608 1674 2.214376 TCCGATGGTGGCTGAAAATT 57.786 45.000 0.00 0.00 0.00 1.82
1638 1704 3.206150 GTTGAAGACAAAGGAGAGCACA 58.794 45.455 0.00 0.00 37.77 4.57
1640 1706 2.439507 AGGTTGAAGACAAAGGAGAGCA 59.560 45.455 0.00 0.00 37.77 4.26
1642 1708 3.071602 TGGAGGTTGAAGACAAAGGAGAG 59.928 47.826 0.00 0.00 37.77 3.20
1645 1711 3.244911 GGATGGAGGTTGAAGACAAAGGA 60.245 47.826 0.00 0.00 37.77 3.36
1649 1715 3.619733 CGATGGATGGAGGTTGAAGACAA 60.620 47.826 0.00 0.00 0.00 3.18
1650 1716 2.093500 CGATGGATGGAGGTTGAAGACA 60.093 50.000 0.00 0.00 0.00 3.41
1663 1729 5.819379 TCTGAAAGAAAGAATCCGATGGATG 59.181 40.000 0.00 0.00 42.31 3.51
1665 1731 5.420725 TCTGAAAGAAAGAATCCGATGGA 57.579 39.130 0.00 0.00 42.31 3.41
1711 1777 7.783596 AGGTACTTAGTGCTCTAGGCTTAAATA 59.216 37.037 4.96 0.00 37.29 1.40
1712 1778 6.612049 AGGTACTTAGTGCTCTAGGCTTAAAT 59.388 38.462 4.96 0.00 37.29 1.40
1739 1805 4.446371 CTCTACATAGCCTCTTTTGTGGG 58.554 47.826 0.00 0.00 33.89 4.61
1750 1816 8.260818 TCCATTTATCTATTGCTCTACATAGCC 58.739 37.037 0.00 0.00 42.05 3.93
1840 1909 2.627699 CCAACAACCAACATACCAGCTT 59.372 45.455 0.00 0.00 0.00 3.74
1842 1911 1.272212 CCCAACAACCAACATACCAGC 59.728 52.381 0.00 0.00 0.00 4.85
1881 1950 6.638468 CACTGTTTTTCTTTGAATACTCAGCC 59.362 38.462 0.00 0.00 31.69 4.85
1942 2015 1.605710 CGTGAATCATCCCCATCTTGC 59.394 52.381 0.00 0.00 0.00 4.01
1954 2027 2.470983 TGGTCTGCATTCGTGAATCA 57.529 45.000 0.00 0.00 0.00 2.57
1984 2057 1.346395 ACTGTGTATGTCCAGCCGAAA 59.654 47.619 0.00 0.00 31.76 3.46
1985 2058 0.973632 ACTGTGTATGTCCAGCCGAA 59.026 50.000 0.00 0.00 31.76 4.30
2021 2094 2.740055 CAGTGGCCAGCGTCTCAC 60.740 66.667 5.11 0.00 0.00 3.51
2037 2110 0.467844 AGGCACAACATCTTGCACCA 60.468 50.000 0.00 0.00 40.75 4.17
2040 2113 2.302733 TCTCTAGGCACAACATCTTGCA 59.697 45.455 0.00 0.00 40.75 4.08
2057 2130 6.040729 CCACTTGTATGTCTCATGATCTCTCT 59.959 42.308 0.00 0.00 0.00 3.10
2109 2182 1.149101 AATTCACCACACTCCACCCT 58.851 50.000 0.00 0.00 0.00 4.34
2142 2215 9.167311 GGTGAAGATACATACAAGAGTTTGAAT 57.833 33.333 0.00 0.00 37.73 2.57
2251 2324 0.756903 GGTATAGGCTCGGCTTTCCA 59.243 55.000 0.00 0.00 0.00 3.53
2319 2392 3.009143 ACAGGTAGGTCATGGGTTTCTTC 59.991 47.826 0.00 0.00 31.56 2.87
2382 2455 5.407502 CACAATCTACACACATAGACGGAA 58.592 41.667 0.00 0.00 34.02 4.30
2386 2459 6.163476 TGAACCACAATCTACACACATAGAC 58.837 40.000 0.00 0.00 34.02 2.59
2393 2466 5.227569 ACATCTGAACCACAATCTACACA 57.772 39.130 0.00 0.00 0.00 3.72
2451 2524 1.136891 AGTTCCAACACAGCCAAAAGC 59.863 47.619 0.00 0.00 44.25 3.51
2461 2534 3.140325 TGATCTTCCCAGTTCCAACAC 57.860 47.619 0.00 0.00 0.00 3.32
2495 2569 4.098807 CCCATGATGCATGATGTTTCTTCA 59.901 41.667 22.27 3.70 43.81 3.02
2620 2695 3.259625 GTCTCTAAAAGTCCCACAGCTCT 59.740 47.826 0.00 0.00 0.00 4.09
2701 2778 0.888619 TCCTGTCACGTAGGCTCTTG 59.111 55.000 0.00 0.00 35.23 3.02
2712 2789 7.630242 TTGATATCAAAATCCTTCCTGTCAC 57.370 36.000 15.82 0.00 32.11 3.67
2745 2822 6.654582 TGTGCATTGTCTAATCTTCTGCTTTA 59.345 34.615 0.00 0.00 0.00 1.85
2762 2839 7.231705 TGTTTTAAAGAACACATGTGCATTG 57.768 32.000 25.68 1.88 34.77 2.82
2836 2913 9.801873 ATGTATTTAGCATTGTCCATTGTTTAC 57.198 29.630 0.00 0.00 0.00 2.01
2862 2940 0.333652 TCTGTCGATAGTGGGTCCCA 59.666 55.000 6.47 6.47 37.40 4.37
2962 3048 3.681417 GCATGCCTTCCAATGAAAAACTC 59.319 43.478 6.36 0.00 0.00 3.01
2963 3049 3.071312 TGCATGCCTTCCAATGAAAAACT 59.929 39.130 16.68 0.00 0.00 2.66
2979 3065 0.594602 TGCTCACAAGAGTTGCATGC 59.405 50.000 11.82 11.82 44.00 4.06
3061 3602 4.067896 GTGCACAGGATCTCTTCAAAAGA 58.932 43.478 13.17 0.00 35.87 2.52
3138 3679 2.231235 CCACCCCAGAAATTACAACTGC 59.769 50.000 0.00 0.00 0.00 4.40
3160 3701 8.721133 AAGATTTAACACCCATTAGAAAGGTT 57.279 30.769 0.00 0.00 0.00 3.50
3256 3797 9.559958 CAATGATGACAAGTTACCAATAAGTTC 57.440 33.333 0.00 0.00 32.57 3.01
3264 3805 5.048083 GGAAAGCAATGATGACAAGTTACCA 60.048 40.000 0.00 0.00 0.00 3.25
3271 3812 2.827322 CCCTGGAAAGCAATGATGACAA 59.173 45.455 0.00 0.00 0.00 3.18
3278 3819 3.317430 GCTATCTTCCCTGGAAAGCAATG 59.683 47.826 13.63 0.00 36.24 2.82
3574 4115 9.701098 GGTTATCCGAAACATGATATTACAGTA 57.299 33.333 0.00 0.00 0.00 2.74
3797 4347 5.096443 AGCAACCAATGAAAACCAAGAAA 57.904 34.783 0.00 0.00 0.00 2.52
3804 4354 4.972286 GCAAGTAGCAACCAATGAAAAC 57.028 40.909 0.00 0.00 44.79 2.43
3831 4382 0.032403 GGCAATGCAGCAACAGTCAA 59.968 50.000 7.79 0.00 35.83 3.18
3874 4427 8.947115 AGAAGGAACAGAAAATTCTAAATACGG 58.053 33.333 0.00 0.00 35.34 4.02
3987 4540 8.560355 TTGGAAAGATCGTCAAATTAGATTCA 57.440 30.769 2.43 0.00 0.00 2.57
4037 4590 5.938125 TCCAACCTACAAATCTAGCAACTTC 59.062 40.000 0.00 0.00 0.00 3.01
4057 4610 9.483916 CCGAATACATGTGTATATAAACTCCAA 57.516 33.333 9.11 0.00 40.10 3.53
4093 4646 5.763876 AGAATATACCCCTCATGCCTAAC 57.236 43.478 0.00 0.00 0.00 2.34
4103 4656 4.663592 CCACCCTACAAAGAATATACCCCT 59.336 45.833 0.00 0.00 0.00 4.79
4104 4657 4.661709 TCCACCCTACAAAGAATATACCCC 59.338 45.833 0.00 0.00 0.00 4.95
4105 4658 5.368816 ACTCCACCCTACAAAGAATATACCC 59.631 44.000 0.00 0.00 0.00 3.69
4147 4707 2.158900 ACCTCCATGCCTAACGATTCTG 60.159 50.000 0.00 0.00 0.00 3.02
4232 4844 8.252964 AGACGGTGATACAAAATAGAAACTTC 57.747 34.615 0.00 0.00 0.00 3.01
4383 5001 5.646793 GTGCATGCCTCATGATATTACTGAT 59.353 40.000 16.68 0.00 43.81 2.90
4433 5051 2.040178 AGTTCGAGTCATACCCCATCC 58.960 52.381 0.00 0.00 0.00 3.51
4495 5114 6.491745 TCCTGCAGACCATACAAAACAAATTA 59.508 34.615 17.39 0.00 0.00 1.40
4569 5188 4.588528 ACATTTGGTGTTAAGATGGCAAGT 59.411 37.500 0.00 0.00 38.01 3.16
4584 5203 4.802039 CGCTTGTACTCGTATACATTTGGT 59.198 41.667 3.32 0.00 35.04 3.67
4614 5233 4.816925 ACTTCACAGTTAAGAACCTTCTGC 59.183 41.667 1.28 0.00 37.65 4.26
4834 5521 7.806690 TGTATTTCAAACATGAGCTAACAGTC 58.193 34.615 0.00 0.00 0.00 3.51
4849 5537 7.172532 ACGAAGAGTAAGCACATGTATTTCAAA 59.827 33.333 0.00 0.00 0.00 2.69
4895 5583 7.395190 AGTCACAAAGATAATTGCAGCATTA 57.605 32.000 0.00 0.00 33.52 1.90
5072 5760 0.319555 CGTGACACAGGGTACAGTGG 60.320 60.000 6.37 0.92 39.61 4.00
5090 5778 4.202000 ACAATGAGAGATAGACAGTCAGCG 60.202 45.833 2.66 0.00 0.00 5.18
5190 5880 7.902920 AAATGCATCCTTACCATTAGAACAT 57.097 32.000 0.00 0.00 0.00 2.71
5269 5963 0.179086 GAGAGCAGGCAGGTTAGAGC 60.179 60.000 0.00 0.00 0.00 4.09
5893 6777 3.867857 TGATGAAAATACTGCCACGCTA 58.132 40.909 0.00 0.00 0.00 4.26
5942 6826 6.930068 TTACCTAGTCTCTTTAGGTTGCTT 57.070 37.500 9.05 0.00 46.80 3.91
6033 6918 3.949754 CCATAGGATTCACACTGCATTGT 59.050 43.478 3.48 3.48 0.00 2.71
6196 7081 7.227711 TCTCAAATGAAAGAACCGTCATACAAA 59.772 33.333 0.00 0.00 33.31 2.83
6221 7106 7.293018 CAAGCTGCAACAAAGGAAATAAATTC 58.707 34.615 1.02 0.00 37.31 2.17
6227 7112 2.699846 TCCAAGCTGCAACAAAGGAAAT 59.300 40.909 1.02 0.00 0.00 2.17
6268 7153 4.513406 AGAAACCCACAAGAAACTACCA 57.487 40.909 0.00 0.00 0.00 3.25
6292 7177 2.170607 AGGCGCAGTTCCAGTATTATGT 59.829 45.455 10.83 0.00 0.00 2.29
6314 7199 9.319143 GATCGCTATTATTATTGTAGAATGCCT 57.681 33.333 0.00 0.00 0.00 4.75
6382 7267 5.279406 GCATTGTAGCATCCTCATCTAGAGT 60.279 44.000 0.00 0.00 43.12 3.24
6389 7274 3.117776 TCCAAGCATTGTAGCATCCTCAT 60.118 43.478 0.00 0.00 46.99 2.90
6390 7275 2.239402 TCCAAGCATTGTAGCATCCTCA 59.761 45.455 0.00 0.00 46.99 3.86
6421 7310 2.035961 AGACAGCGGCGATACATAACAT 59.964 45.455 12.98 0.00 0.00 2.71
6433 7322 1.137086 TGAGGATTTCTAGACAGCGGC 59.863 52.381 0.00 0.00 0.00 6.53
6473 7366 2.181777 CTGCCGCGACTGCTTCTA 59.818 61.111 8.23 0.00 39.65 2.10
6474 7367 4.749310 CCTGCCGCGACTGCTTCT 62.749 66.667 8.23 0.00 39.65 2.85
6496 7389 2.375146 ACAAAGAGAACCCAAAAGCGT 58.625 42.857 0.00 0.00 0.00 5.07
6504 7397 3.767711 AGGAATCCAACAAAGAGAACCC 58.232 45.455 0.61 0.00 0.00 4.11
6523 7416 2.021355 TGCACAAAGCCAACAAAAGG 57.979 45.000 0.00 0.00 44.83 3.11
6524 7417 3.196463 TCATGCACAAAGCCAACAAAAG 58.804 40.909 0.00 0.00 44.83 2.27
6525 7418 3.257469 TCATGCACAAAGCCAACAAAA 57.743 38.095 0.00 0.00 44.83 2.44
6526 7419 2.935201 GTTCATGCACAAAGCCAACAAA 59.065 40.909 0.00 0.00 44.83 2.83
6527 7420 2.548875 GTTCATGCACAAAGCCAACAA 58.451 42.857 0.00 0.00 44.83 2.83
6528 7421 1.202510 GGTTCATGCACAAAGCCAACA 60.203 47.619 0.00 0.00 44.83 3.33
6529 7422 1.501169 GGTTCATGCACAAAGCCAAC 58.499 50.000 0.00 0.00 44.83 3.77
6530 7423 0.031857 CGGTTCATGCACAAAGCCAA 59.968 50.000 0.00 0.00 44.83 4.52
6531 7424 0.821301 TCGGTTCATGCACAAAGCCA 60.821 50.000 0.00 0.00 44.83 4.75
6532 7425 0.387239 GTCGGTTCATGCACAAAGCC 60.387 55.000 0.00 0.00 44.83 4.35
6533 7426 0.310543 TGTCGGTTCATGCACAAAGC 59.689 50.000 0.00 0.00 45.96 3.51
6534 7427 2.587956 CATGTCGGTTCATGCACAAAG 58.412 47.619 0.00 0.00 38.65 2.77
6554 7460 0.600255 CCTGTGTCGTGTCTGTTCCC 60.600 60.000 0.00 0.00 0.00 3.97
6576 7482 4.815846 GCAAAATTGTTCTCCAACCATGTT 59.184 37.500 0.00 0.00 35.44 2.71
6580 7486 4.478206 TTGCAAAATTGTTCTCCAACCA 57.522 36.364 0.00 0.00 35.44 3.67
6637 7543 9.433153 AGGTGTATTTTTAGCAGTAGTTTACTC 57.567 33.333 0.00 0.00 36.76 2.59
6742 7649 0.935196 GGTTATAGCGTTCGCTTGGG 59.065 55.000 23.92 0.00 42.08 4.12
6772 7679 0.242555 TGAACACTCGCAGATACGCA 59.757 50.000 0.00 0.00 33.89 5.24
6773 7680 0.640768 GTGAACACTCGCAGATACGC 59.359 55.000 0.00 0.00 33.89 4.42
6775 7682 6.462073 TTTTAAGTGAACACTCGCAGATAC 57.538 37.500 7.93 0.00 41.58 2.24
6800 7721 2.711547 AGGGAAAGCTCACTAAAGTGGT 59.288 45.455 10.11 0.00 45.65 4.16
6804 7725 6.287589 TCTCTAAGGGAAAGCTCACTAAAG 57.712 41.667 0.00 0.00 32.55 1.85
6829 8084 3.825585 TGTAACATGGCAATTCTCAAGCA 59.174 39.130 0.00 0.00 0.00 3.91
6891 8146 9.065871 GCTAGCATAACAATTTTTCACTTACAG 57.934 33.333 10.63 0.00 0.00 2.74
6897 8152 8.519492 TTTCTGCTAGCATAACAATTTTTCAC 57.481 30.769 19.72 0.00 0.00 3.18
6919 8174 9.860898 AGCTTGGTGAATTTCTAACAATATTTC 57.139 29.630 0.00 0.00 0.00 2.17
6961 8216 6.577103 TGGCAAATCATCAAAAAGTGTGTTA 58.423 32.000 0.00 0.00 0.00 2.41
6962 8217 5.426504 TGGCAAATCATCAAAAAGTGTGTT 58.573 33.333 0.00 0.00 0.00 3.32
6964 8219 5.615984 GCATGGCAAATCATCAAAAAGTGTG 60.616 40.000 0.00 0.00 0.00 3.82
6990 8252 2.097825 AGGCTTGACAATTCTCCATGC 58.902 47.619 0.00 0.00 0.00 4.06
7004 8266 5.982890 TGGGAATTTTCTCTTTAGGCTTG 57.017 39.130 0.00 0.00 0.00 4.01
7020 8282 4.419282 ACAAATCCAGACACATTGGGAAT 58.581 39.130 0.00 0.00 36.34 3.01
7027 8289 3.006859 TCTGTCGACAAATCCAGACACAT 59.993 43.478 20.49 0.00 38.52 3.21
7028 8290 2.364002 TCTGTCGACAAATCCAGACACA 59.636 45.455 20.49 0.00 38.52 3.72
7029 8291 3.026630 TCTGTCGACAAATCCAGACAC 57.973 47.619 20.49 0.00 38.52 3.67
7030 8292 3.320826 TCTTCTGTCGACAAATCCAGACA 59.679 43.478 20.49 0.00 40.77 3.41
7031 8293 3.914312 TCTTCTGTCGACAAATCCAGAC 58.086 45.455 20.49 0.00 33.90 3.51
7032 8294 4.600692 TTCTTCTGTCGACAAATCCAGA 57.399 40.909 20.49 12.67 32.38 3.86
7033 8295 5.673337 TTTTCTTCTGTCGACAAATCCAG 57.327 39.130 20.49 10.63 0.00 3.86
7034 8296 6.039270 ACAATTTTCTTCTGTCGACAAATCCA 59.961 34.615 20.49 0.87 0.00 3.41
7035 8297 6.360681 CACAATTTTCTTCTGTCGACAAATCC 59.639 38.462 20.49 0.00 0.00 3.01
7036 8298 6.360681 CCACAATTTTCTTCTGTCGACAAATC 59.639 38.462 20.49 0.00 0.00 2.17
7037 8299 6.183360 ACCACAATTTTCTTCTGTCGACAAAT 60.183 34.615 20.49 12.05 0.00 2.32
7038 8300 5.124776 ACCACAATTTTCTTCTGTCGACAAA 59.875 36.000 20.49 14.81 0.00 2.83
7039 8301 4.638421 ACCACAATTTTCTTCTGTCGACAA 59.362 37.500 20.49 4.58 0.00 3.18
7040 8302 4.035091 CACCACAATTTTCTTCTGTCGACA 59.965 41.667 18.88 18.88 0.00 4.35
7041 8303 4.527564 CACCACAATTTTCTTCTGTCGAC 58.472 43.478 9.11 9.11 0.00 4.20
7042 8304 3.003275 GCACCACAATTTTCTTCTGTCGA 59.997 43.478 0.00 0.00 0.00 4.20
7043 8305 3.003689 AGCACCACAATTTTCTTCTGTCG 59.996 43.478 0.00 0.00 0.00 4.35
7044 8306 4.574599 AGCACCACAATTTTCTTCTGTC 57.425 40.909 0.00 0.00 0.00 3.51
7045 8307 6.463995 TTTAGCACCACAATTTTCTTCTGT 57.536 33.333 0.00 0.00 0.00 3.41
7046 8308 7.951530 AATTTAGCACCACAATTTTCTTCTG 57.048 32.000 0.00 0.00 0.00 3.02
7049 8311 9.271828 CCTTAAATTTAGCACCACAATTTTCTT 57.728 29.630 0.00 0.00 33.28 2.52
7050 8312 8.646900 TCCTTAAATTTAGCACCACAATTTTCT 58.353 29.630 0.00 0.00 33.28 2.52
7051 8313 8.825667 TCCTTAAATTTAGCACCACAATTTTC 57.174 30.769 0.00 0.00 33.28 2.29
7052 8314 9.620259 TTTCCTTAAATTTAGCACCACAATTTT 57.380 25.926 0.00 0.00 33.28 1.82
7053 8315 9.051679 GTTTCCTTAAATTTAGCACCACAATTT 57.948 29.630 0.00 0.00 35.01 1.82
7054 8316 8.207545 TGTTTCCTTAAATTTAGCACCACAATT 58.792 29.630 0.00 0.00 0.00 2.32
7055 8317 7.655732 GTGTTTCCTTAAATTTAGCACCACAAT 59.344 33.333 0.00 0.00 0.00 2.71
7056 8318 6.981559 GTGTTTCCTTAAATTTAGCACCACAA 59.018 34.615 0.00 0.00 0.00 3.33
7057 8319 6.508777 GTGTTTCCTTAAATTTAGCACCACA 58.491 36.000 0.00 0.00 0.00 4.17
7058 8320 5.627780 CGTGTTTCCTTAAATTTAGCACCAC 59.372 40.000 0.00 2.46 0.00 4.16
7059 8321 5.299782 ACGTGTTTCCTTAAATTTAGCACCA 59.700 36.000 0.00 0.00 0.00 4.17
7060 8322 5.765176 ACGTGTTTCCTTAAATTTAGCACC 58.235 37.500 0.00 0.00 0.00 5.01
7061 8323 6.665465 AGACGTGTTTCCTTAAATTTAGCAC 58.335 36.000 0.00 0.00 0.00 4.40
7062 8324 6.708949 AGAGACGTGTTTCCTTAAATTTAGCA 59.291 34.615 0.00 0.00 0.00 3.49
7063 8325 7.130303 AGAGACGTGTTTCCTTAAATTTAGC 57.870 36.000 0.00 0.00 0.00 3.09
7064 8326 7.534239 GCAAGAGACGTGTTTCCTTAAATTTAG 59.466 37.037 0.00 0.00 0.00 1.85
7065 8327 7.227910 AGCAAGAGACGTGTTTCCTTAAATTTA 59.772 33.333 0.00 0.00 0.00 1.40
7066 8328 6.039382 AGCAAGAGACGTGTTTCCTTAAATTT 59.961 34.615 0.00 0.00 0.00 1.82
7067 8329 5.531287 AGCAAGAGACGTGTTTCCTTAAATT 59.469 36.000 0.00 0.00 0.00 1.82
7068 8330 5.063880 AGCAAGAGACGTGTTTCCTTAAAT 58.936 37.500 0.00 0.00 0.00 1.40
7069 8331 4.448210 AGCAAGAGACGTGTTTCCTTAAA 58.552 39.130 0.00 0.00 0.00 1.52
7070 8332 4.067972 AGCAAGAGACGTGTTTCCTTAA 57.932 40.909 0.00 0.00 0.00 1.85
7071 8333 3.746045 AGCAAGAGACGTGTTTCCTTA 57.254 42.857 0.00 0.00 0.00 2.69
7072 8334 2.622064 AGCAAGAGACGTGTTTCCTT 57.378 45.000 0.00 0.00 0.00 3.36
7073 8335 2.614057 CAAAGCAAGAGACGTGTTTCCT 59.386 45.455 0.00 0.00 0.00 3.36
7074 8336 2.612212 TCAAAGCAAGAGACGTGTTTCC 59.388 45.455 0.00 0.00 0.00 3.13
7075 8337 3.555956 TCTCAAAGCAAGAGACGTGTTTC 59.444 43.478 0.00 0.00 37.22 2.78
7076 8338 3.531538 TCTCAAAGCAAGAGACGTGTTT 58.468 40.909 0.00 0.00 37.22 2.83
7077 8339 3.179443 TCTCAAAGCAAGAGACGTGTT 57.821 42.857 0.00 0.00 37.22 3.32
7078 8340 2.890808 TCTCAAAGCAAGAGACGTGT 57.109 45.000 0.00 0.00 37.22 4.49
7079 8341 3.181536 CGAATCTCAAAGCAAGAGACGTG 60.182 47.826 0.00 0.00 44.23 4.49
7080 8342 2.989840 CGAATCTCAAAGCAAGAGACGT 59.010 45.455 5.12 0.00 44.23 4.34
7081 8343 2.989840 ACGAATCTCAAAGCAAGAGACG 59.010 45.455 5.12 7.81 44.23 4.18
7082 8344 4.923871 TGTACGAATCTCAAAGCAAGAGAC 59.076 41.667 5.12 0.00 44.23 3.36
7083 8345 4.923871 GTGTACGAATCTCAAAGCAAGAGA 59.076 41.667 5.43 5.43 45.38 3.10
7084 8346 4.686091 TGTGTACGAATCTCAAAGCAAGAG 59.314 41.667 0.00 0.00 34.42 2.85
7085 8347 4.627058 TGTGTACGAATCTCAAAGCAAGA 58.373 39.130 0.00 0.00 0.00 3.02
7086 8348 4.990543 TGTGTACGAATCTCAAAGCAAG 57.009 40.909 0.00 0.00 0.00 4.01
7087 8349 5.525745 TCTTTGTGTACGAATCTCAAAGCAA 59.474 36.000 18.46 8.49 41.74 3.91
7088 8350 5.053811 TCTTTGTGTACGAATCTCAAAGCA 58.946 37.500 18.46 11.11 41.74 3.91
7089 8351 5.591643 TCTTTGTGTACGAATCTCAAAGC 57.408 39.130 18.46 0.00 41.74 3.51
7090 8352 7.796838 TCAATCTTTGTGTACGAATCTCAAAG 58.203 34.615 17.81 17.81 42.54 2.77
7091 8353 7.722795 TCAATCTTTGTGTACGAATCTCAAA 57.277 32.000 0.00 0.00 0.00 2.69
7092 8354 7.722795 TTCAATCTTTGTGTACGAATCTCAA 57.277 32.000 0.00 0.00 0.00 3.02
7093 8355 7.387673 ACATTCAATCTTTGTGTACGAATCTCA 59.612 33.333 0.00 0.00 0.00 3.27
7094 8356 7.689812 CACATTCAATCTTTGTGTACGAATCTC 59.310 37.037 0.00 0.00 36.77 2.75
7095 8357 7.521529 CACATTCAATCTTTGTGTACGAATCT 58.478 34.615 0.00 0.00 36.77 2.40
7096 8358 6.249260 GCACATTCAATCTTTGTGTACGAATC 59.751 38.462 0.00 0.00 42.11 2.52
7097 8359 6.086222 GCACATTCAATCTTTGTGTACGAAT 58.914 36.000 0.00 0.00 42.11 3.34
7098 8360 5.448438 GCACATTCAATCTTTGTGTACGAA 58.552 37.500 0.00 0.00 42.11 3.85
7099 8361 4.083537 GGCACATTCAATCTTTGTGTACGA 60.084 41.667 0.00 0.00 42.11 3.43
7100 8362 4.158384 GGCACATTCAATCTTTGTGTACG 58.842 43.478 4.44 0.00 42.11 3.67
7101 8363 4.917415 GTGGCACATTCAATCTTTGTGTAC 59.083 41.667 13.86 0.00 44.52 2.90
7102 8364 4.582240 TGTGGCACATTCAATCTTTGTGTA 59.418 37.500 17.96 0.00 44.52 2.90
7103 8365 3.384146 TGTGGCACATTCAATCTTTGTGT 59.616 39.130 17.96 0.00 44.52 3.72
7104 8366 3.979948 TGTGGCACATTCAATCTTTGTG 58.020 40.909 17.96 0.00 44.52 3.33
7105 8367 4.877378 ATGTGGCACATTCAATCTTTGT 57.123 36.364 26.78 1.41 44.52 2.83
7106 8368 4.802039 GCTATGTGGCACATTCAATCTTTG 59.198 41.667 35.36 13.59 44.52 2.77
7107 8369 4.463539 TGCTATGTGGCACATTCAATCTTT 59.536 37.500 35.36 13.69 44.52 2.52
7108 8370 4.018490 TGCTATGTGGCACATTCAATCTT 58.982 39.130 35.36 14.42 44.52 2.40
7109 8371 3.623703 TGCTATGTGGCACATTCAATCT 58.376 40.909 35.36 15.17 44.52 2.40
7110 8372 4.579454 ATGCTATGTGGCACATTCAATC 57.421 40.909 35.36 20.00 45.36 2.67
7111 8373 5.113383 CAAATGCTATGTGGCACATTCAAT 58.887 37.500 35.36 22.97 45.36 2.57
7112 8374 4.496360 CAAATGCTATGTGGCACATTCAA 58.504 39.130 35.36 21.52 45.36 2.69
7113 8375 3.676598 GCAAATGCTATGTGGCACATTCA 60.677 43.478 35.36 30.04 45.36 2.57
7114 8376 2.861935 GCAAATGCTATGTGGCACATTC 59.138 45.455 35.36 26.17 45.36 2.67
7115 8377 2.896168 GCAAATGCTATGTGGCACATT 58.104 42.857 35.36 17.34 45.36 2.71
7116 8378 2.589798 GCAAATGCTATGTGGCACAT 57.410 45.000 33.18 33.18 45.36 3.21
7140 8402 6.878317 TGACGTCATCTCATAGGATCTTTTT 58.122 36.000 15.76 0.00 0.00 1.94
7141 8403 6.471233 TGACGTCATCTCATAGGATCTTTT 57.529 37.500 15.76 0.00 0.00 2.27
7142 8404 6.471233 TTGACGTCATCTCATAGGATCTTT 57.529 37.500 20.80 0.00 0.00 2.52
7143 8405 6.471233 TTTGACGTCATCTCATAGGATCTT 57.529 37.500 20.80 0.00 0.00 2.40
7144 8406 6.662865 ATTTGACGTCATCTCATAGGATCT 57.337 37.500 20.80 0.00 0.00 2.75
7145 8407 6.703607 ACAATTTGACGTCATCTCATAGGATC 59.296 38.462 20.80 0.00 0.00 3.36
7146 8408 6.586344 ACAATTTGACGTCATCTCATAGGAT 58.414 36.000 20.80 0.29 0.00 3.24
7147 8409 5.977635 ACAATTTGACGTCATCTCATAGGA 58.022 37.500 20.80 0.00 0.00 2.94
7148 8410 6.668541 AACAATTTGACGTCATCTCATAGG 57.331 37.500 20.80 6.56 0.00 2.57
7149 8411 7.010460 TGCTAACAATTTGACGTCATCTCATAG 59.990 37.037 20.80 17.03 0.00 2.23
7150 8412 6.816140 TGCTAACAATTTGACGTCATCTCATA 59.184 34.615 20.80 8.00 0.00 2.15
7151 8413 5.643348 TGCTAACAATTTGACGTCATCTCAT 59.357 36.000 20.80 6.65 0.00 2.90
7152 8414 4.994217 TGCTAACAATTTGACGTCATCTCA 59.006 37.500 20.80 0.31 0.00 3.27
7153 8415 5.530519 TGCTAACAATTTGACGTCATCTC 57.469 39.130 20.80 2.37 0.00 2.75
7154 8416 6.149308 TGAATGCTAACAATTTGACGTCATCT 59.851 34.615 20.80 6.83 0.00 2.90
7155 8417 6.249260 GTGAATGCTAACAATTTGACGTCATC 59.751 38.462 20.80 9.42 0.00 2.92
7156 8418 6.086222 GTGAATGCTAACAATTTGACGTCAT 58.914 36.000 20.80 5.63 0.00 3.06
7157 8419 5.008118 TGTGAATGCTAACAATTTGACGTCA 59.992 36.000 15.76 15.76 0.00 4.35
7158 8420 5.448438 TGTGAATGCTAACAATTTGACGTC 58.552 37.500 9.11 9.11 0.00 4.34
7159 8421 5.431420 TGTGAATGCTAACAATTTGACGT 57.569 34.783 2.79 0.00 0.00 4.34
7160 8422 6.129115 CCTTTGTGAATGCTAACAATTTGACG 60.129 38.462 2.79 0.00 36.26 4.35
7161 8423 6.146021 CCCTTTGTGAATGCTAACAATTTGAC 59.854 38.462 2.79 0.00 36.26 3.18
7162 8424 6.041409 TCCCTTTGTGAATGCTAACAATTTGA 59.959 34.615 2.79 0.00 36.26 2.69
7163 8425 6.222389 TCCCTTTGTGAATGCTAACAATTTG 58.778 36.000 0.00 0.00 36.26 2.32
7164 8426 6.418057 TCCCTTTGTGAATGCTAACAATTT 57.582 33.333 0.00 0.00 36.26 1.82
7165 8427 6.418057 TTCCCTTTGTGAATGCTAACAATT 57.582 33.333 0.00 0.00 36.26 2.32
7166 8428 6.418057 TTTCCCTTTGTGAATGCTAACAAT 57.582 33.333 0.00 0.00 36.26 2.71
7167 8429 5.860941 TTTCCCTTTGTGAATGCTAACAA 57.139 34.783 0.00 0.00 34.57 2.83
7168 8430 5.860941 TTTTCCCTTTGTGAATGCTAACA 57.139 34.783 0.00 0.00 0.00 2.41
7169 8431 6.045955 TGTTTTTCCCTTTGTGAATGCTAAC 58.954 36.000 0.00 0.00 0.00 2.34
7170 8432 6.227298 TGTTTTTCCCTTTGTGAATGCTAA 57.773 33.333 0.00 0.00 0.00 3.09
7171 8433 5.860941 TGTTTTTCCCTTTGTGAATGCTA 57.139 34.783 0.00 0.00 0.00 3.49
7172 8434 4.751767 TGTTTTTCCCTTTGTGAATGCT 57.248 36.364 0.00 0.00 0.00 3.79
7173 8435 5.809719 TTTGTTTTTCCCTTTGTGAATGC 57.190 34.783 0.00 0.00 0.00 3.56
7174 8436 7.094848 ACTGTTTTGTTTTTCCCTTTGTGAATG 60.095 33.333 0.00 0.00 0.00 2.67
7175 8437 6.939730 ACTGTTTTGTTTTTCCCTTTGTGAAT 59.060 30.769 0.00 0.00 0.00 2.57
7176 8438 6.292150 ACTGTTTTGTTTTTCCCTTTGTGAA 58.708 32.000 0.00 0.00 0.00 3.18
7177 8439 5.859495 ACTGTTTTGTTTTTCCCTTTGTGA 58.141 33.333 0.00 0.00 0.00 3.58
7178 8440 5.164002 CGACTGTTTTGTTTTTCCCTTTGTG 60.164 40.000 0.00 0.00 0.00 3.33
7179 8441 4.926832 CGACTGTTTTGTTTTTCCCTTTGT 59.073 37.500 0.00 0.00 0.00 2.83
7180 8442 4.328712 CCGACTGTTTTGTTTTTCCCTTTG 59.671 41.667 0.00 0.00 0.00 2.77
7181 8443 4.500127 CCGACTGTTTTGTTTTTCCCTTT 58.500 39.130 0.00 0.00 0.00 3.11
7182 8444 3.677700 GCCGACTGTTTTGTTTTTCCCTT 60.678 43.478 0.00 0.00 0.00 3.95
7183 8445 2.159156 GCCGACTGTTTTGTTTTTCCCT 60.159 45.455 0.00 0.00 0.00 4.20
7184 8446 2.198406 GCCGACTGTTTTGTTTTTCCC 58.802 47.619 0.00 0.00 0.00 3.97
7185 8447 1.849829 CGCCGACTGTTTTGTTTTTCC 59.150 47.619 0.00 0.00 0.00 3.13
7186 8448 1.849829 CCGCCGACTGTTTTGTTTTTC 59.150 47.619 0.00 0.00 0.00 2.29
7187 8449 1.473278 TCCGCCGACTGTTTTGTTTTT 59.527 42.857 0.00 0.00 0.00 1.94
7188 8450 1.096416 TCCGCCGACTGTTTTGTTTT 58.904 45.000 0.00 0.00 0.00 2.43
7189 8451 1.265905 GATCCGCCGACTGTTTTGTTT 59.734 47.619 0.00 0.00 0.00 2.83
7190 8452 0.872388 GATCCGCCGACTGTTTTGTT 59.128 50.000 0.00 0.00 0.00 2.83
7191 8453 0.953960 GGATCCGCCGACTGTTTTGT 60.954 55.000 0.00 0.00 0.00 2.83
7192 8454 1.644786 GGGATCCGCCGACTGTTTTG 61.645 60.000 5.45 0.00 37.63 2.44
7193 8455 1.376812 GGGATCCGCCGACTGTTTT 60.377 57.895 5.45 0.00 37.63 2.43
7194 8456 1.838073 AAGGGATCCGCCGACTGTTT 61.838 55.000 5.45 0.00 37.63 2.83
7195 8457 1.838073 AAAGGGATCCGCCGACTGTT 61.838 55.000 5.45 0.00 37.63 3.16
7196 8458 1.838073 AAAAGGGATCCGCCGACTGT 61.838 55.000 5.45 0.00 37.63 3.55
7197 8459 0.676782 AAAAAGGGATCCGCCGACTG 60.677 55.000 5.45 0.00 37.63 3.51
7198 8460 1.683441 AAAAAGGGATCCGCCGACT 59.317 52.632 5.45 0.00 37.63 4.18
7199 8461 4.313819 AAAAAGGGATCCGCCGAC 57.686 55.556 5.45 0.00 37.63 4.79
7213 8475 1.135257 CCCGCACGCATGGATTAAAAA 60.135 47.619 0.00 0.00 0.00 1.94
7214 8476 0.453793 CCCGCACGCATGGATTAAAA 59.546 50.000 0.00 0.00 0.00 1.52
7215 8477 1.380403 CCCCGCACGCATGGATTAAA 61.380 55.000 0.00 0.00 0.00 1.52
7216 8478 1.821759 CCCCGCACGCATGGATTAA 60.822 57.895 0.00 0.00 0.00 1.40
7217 8479 2.203139 CCCCGCACGCATGGATTA 60.203 61.111 0.00 0.00 0.00 1.75
7236 8498 3.406595 GAAGTGGATGAGGCCGGGG 62.407 68.421 2.18 0.00 0.00 5.73
7237 8499 2.190578 GAAGTGGATGAGGCCGGG 59.809 66.667 2.18 0.00 0.00 5.73
7238 8500 2.190578 GGAAGTGGATGAGGCCGG 59.809 66.667 0.00 0.00 0.00 6.13
7239 8501 1.450312 GTGGAAGTGGATGAGGCCG 60.450 63.158 0.00 0.00 0.00 6.13
7240 8502 0.329596 AAGTGGAAGTGGATGAGGCC 59.670 55.000 0.00 0.00 0.00 5.19
7241 8503 1.680249 GGAAGTGGAAGTGGATGAGGC 60.680 57.143 0.00 0.00 0.00 4.70
7242 8504 1.630369 TGGAAGTGGAAGTGGATGAGG 59.370 52.381 0.00 0.00 0.00 3.86
7243 8505 3.539604 GATGGAAGTGGAAGTGGATGAG 58.460 50.000 0.00 0.00 0.00 2.90
7244 8506 2.239654 GGATGGAAGTGGAAGTGGATGA 59.760 50.000 0.00 0.00 0.00 2.92
7245 8507 2.025981 TGGATGGAAGTGGAAGTGGATG 60.026 50.000 0.00 0.00 0.00 3.51
7246 8508 2.025887 GTGGATGGAAGTGGAAGTGGAT 60.026 50.000 0.00 0.00 0.00 3.41
7247 8509 1.351017 GTGGATGGAAGTGGAAGTGGA 59.649 52.381 0.00 0.00 0.00 4.02
7248 8510 1.614317 GGTGGATGGAAGTGGAAGTGG 60.614 57.143 0.00 0.00 0.00 4.00
7249 8511 1.352352 AGGTGGATGGAAGTGGAAGTG 59.648 52.381 0.00 0.00 0.00 3.16
7250 8512 1.630878 GAGGTGGATGGAAGTGGAAGT 59.369 52.381 0.00 0.00 0.00 3.01
7251 8513 1.912043 AGAGGTGGATGGAAGTGGAAG 59.088 52.381 0.00 0.00 0.00 3.46
7252 8514 1.630369 CAGAGGTGGATGGAAGTGGAA 59.370 52.381 0.00 0.00 0.00 3.53
7253 8515 1.279496 CAGAGGTGGATGGAAGTGGA 58.721 55.000 0.00 0.00 0.00 4.02
7254 8516 0.393537 GCAGAGGTGGATGGAAGTGG 60.394 60.000 0.00 0.00 0.00 4.00
7255 8517 3.165606 GCAGAGGTGGATGGAAGTG 57.834 57.895 0.00 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.