Multiple sequence alignment - TraesCS4A01G231700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G231700 chr4A 100.000 2723 0 0 1 2723 541359522 541356800 0.000000e+00 5029.0
1 TraesCS4A01G231700 chr4D 94.866 1266 37 17 474 1736 55566498 55567738 0.000000e+00 1953.0
2 TraesCS4A01G231700 chr4D 90.909 352 20 9 1862 2212 55578885 55579225 1.910000e-126 462.0
3 TraesCS4A01G231700 chr4D 86.016 379 30 13 53 416 55566136 55566506 4.250000e-103 385.0
4 TraesCS4A01G231700 chr4D 88.462 182 17 2 2538 2719 309495283 309495460 1.640000e-52 217.0
5 TraesCS4A01G231700 chr4D 89.720 107 11 0 1474 1580 508474955 508475061 1.310000e-28 137.0
6 TraesCS4A01G231700 chr4D 88.764 89 4 5 1804 1886 55578791 55578879 1.330000e-18 104.0
7 TraesCS4A01G231700 chr4B 91.543 1348 51 19 599 1914 82606984 82608300 0.000000e+00 1799.0
8 TraesCS4A01G231700 chr4B 85.440 364 28 12 1 351 82606071 82606422 3.330000e-94 355.0
9 TraesCS4A01G231700 chr4B 89.916 238 19 3 1158 1392 404457864 404458099 4.410000e-78 302.0
10 TraesCS4A01G231700 chr4B 88.800 250 20 5 1964 2212 82608517 82608759 1.580000e-77 300.0
11 TraesCS4A01G231700 chr4B 83.562 73 10 2 2494 2565 454036601 454036672 1.750000e-07 67.6
12 TraesCS4A01G231700 chr5B 85.000 560 63 14 1109 1656 422567914 422568464 1.430000e-152 549.0
13 TraesCS4A01G231700 chr5B 92.222 90 7 0 2451 2540 69812687 69812776 7.910000e-26 128.0
14 TraesCS4A01G231700 chr5B 87.838 74 9 0 2449 2522 704531349 704531422 1.340000e-13 87.9
15 TraesCS4A01G231700 chr5D 84.293 573 69 14 1109 1669 357870053 357869490 8.580000e-150 540.0
16 TraesCS4A01G231700 chr5D 92.216 167 12 1 2551 2717 115995876 115996041 4.530000e-58 235.0
17 TraesCS4A01G231700 chr5D 90.173 173 16 1 2551 2723 411794181 411794352 9.810000e-55 224.0
18 TraesCS4A01G231700 chr5A 82.515 652 77 21 1109 1732 458791315 458790673 3.090000e-149 538.0
19 TraesCS4A01G231700 chr5A 92.045 88 7 0 2449 2536 64382192 64382105 1.020000e-24 124.0
20 TraesCS4A01G231700 chr5A 89.691 97 8 2 2442 2538 90668347 90668441 3.680000e-24 122.0
21 TraesCS4A01G231700 chr5A 88.119 101 10 2 2444 2542 112221025 112221125 4.760000e-23 119.0
22 TraesCS4A01G231700 chr7B 90.336 238 17 5 1158 1392 5327154 5326920 9.470000e-80 307.0
23 TraesCS4A01G231700 chr1D 90.336 238 18 4 1158 1392 96913019 96913254 9.470000e-80 307.0
24 TraesCS4A01G231700 chr3A 89.496 238 20 3 1158 1392 265372324 265372089 2.050000e-76 296.0
25 TraesCS4A01G231700 chr2D 91.279 172 14 1 2552 2723 620004565 620004395 1.630000e-57 233.0
26 TraesCS4A01G231700 chr2D 91.860 86 7 0 2452 2537 278358779 278358694 1.320000e-23 121.0
27 TraesCS4A01G231700 chr2D 82.456 114 17 3 2451 2561 636827092 636826979 2.230000e-16 97.1
28 TraesCS4A01G231700 chr6B 90.588 170 14 2 2552 2721 245724702 245724869 9.810000e-55 224.0
29 TraesCS4A01G231700 chr6B 87.895 190 18 3 2535 2723 159695392 159695577 4.570000e-53 219.0
30 TraesCS4A01G231700 chr7D 87.895 190 18 3 2535 2723 497568288 497568103 4.570000e-53 219.0
31 TraesCS4A01G231700 chr7D 88.235 102 9 3 2442 2542 341623167 341623068 4.760000e-23 119.0
32 TraesCS4A01G231700 chr7D 86.111 108 12 3 2436 2542 341477068 341477173 2.220000e-21 113.0
33 TraesCS4A01G231700 chr3D 87.895 190 18 3 2535 2723 520728271 520728456 4.570000e-53 219.0
34 TraesCS4A01G231700 chr3D 91.209 91 8 0 2452 2542 336539180 336539270 1.020000e-24 124.0
35 TraesCS4A01G231700 chr1A 87.435 191 18 5 2534 2723 588156224 588156409 5.910000e-52 215.0
36 TraesCS4A01G231700 chr3B 91.111 90 8 0 2448 2537 752120278 752120189 3.680000e-24 122.0
37 TraesCS4A01G231700 chr3B 81.731 104 18 1 2452 2554 784869764 784869661 4.830000e-13 86.1
38 TraesCS4A01G231700 chr1B 87.640 89 10 1 2448 2536 328029465 328029552 4.800000e-18 102.0
39 TraesCS4A01G231700 chr2A 81.609 87 12 4 2471 2554 613879507 613879422 4.870000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G231700 chr4A 541356800 541359522 2722 True 5029 5029 100.000000 1 2723 1 chr4A.!!$R1 2722
1 TraesCS4A01G231700 chr4D 55566136 55567738 1602 False 1169 1953 90.441000 53 1736 2 chr4D.!!$F3 1683
2 TraesCS4A01G231700 chr4B 82606071 82608759 2688 False 818 1799 88.594333 1 2212 3 chr4B.!!$F3 2211
3 TraesCS4A01G231700 chr5B 422567914 422568464 550 False 549 549 85.000000 1109 1656 1 chr5B.!!$F2 547
4 TraesCS4A01G231700 chr5D 357869490 357870053 563 True 540 540 84.293000 1109 1669 1 chr5D.!!$R1 560
5 TraesCS4A01G231700 chr5A 458790673 458791315 642 True 538 538 82.515000 1109 1732 1 chr5A.!!$R2 623

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
256 269 0.85353 ACAAAGAAGGAGGGGCAGTT 59.146 50.0 0.0 0.0 0.0 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1921 2338 0.623723 ACCCCTCCACGCATATTTGT 59.376 50.0 0.0 0.0 0.0 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 2.547430 GGCCCGGCAATTACTACTACTC 60.547 54.545 12.58 0.00 0.00 2.59
40 41 3.121544 GCAATTACTACTACTCCCGTGC 58.878 50.000 0.00 0.00 0.00 5.34
44 45 4.445452 TTACTACTACTCCCGTGCTTTG 57.555 45.455 0.00 0.00 0.00 2.77
45 46 2.245582 ACTACTACTCCCGTGCTTTGT 58.754 47.619 0.00 0.00 0.00 2.83
46 47 3.424703 ACTACTACTCCCGTGCTTTGTA 58.575 45.455 0.00 0.00 0.00 2.41
47 48 4.021916 ACTACTACTCCCGTGCTTTGTAT 58.978 43.478 0.00 0.00 0.00 2.29
74 76 1.786579 GCAATGCAAACCGTTGAAGAC 59.213 47.619 0.00 0.00 41.94 3.01
115 123 4.291792 TCCTGGGCATTCATTCATTCATT 58.708 39.130 0.00 0.00 0.00 2.57
116 124 4.342951 TCCTGGGCATTCATTCATTCATTC 59.657 41.667 0.00 0.00 0.00 2.67
117 125 4.100344 CCTGGGCATTCATTCATTCATTCA 59.900 41.667 0.00 0.00 0.00 2.57
118 126 5.221641 CCTGGGCATTCATTCATTCATTCAT 60.222 40.000 0.00 0.00 0.00 2.57
122 130 6.210796 GGCATTCATTCATTCATTCATCGAA 58.789 36.000 0.00 0.00 0.00 3.71
195 208 4.494400 GTAAAGCGCGCGAACCCG 62.494 66.667 37.18 4.51 39.16 5.28
201 214 3.022914 CGCGCGAACCCGATCTAC 61.023 66.667 28.94 0.00 38.22 2.59
243 256 7.873719 TTCAACATTTCTCCAAGTACAAAGA 57.126 32.000 0.00 0.00 0.00 2.52
249 262 4.891992 TCTCCAAGTACAAAGAAGGAGG 57.108 45.455 0.00 0.00 42.20 4.30
250 263 3.583086 TCTCCAAGTACAAAGAAGGAGGG 59.417 47.826 0.00 0.00 42.20 4.30
253 266 1.742308 AGTACAAAGAAGGAGGGGCA 58.258 50.000 0.00 0.00 0.00 5.36
255 268 1.351350 GTACAAAGAAGGAGGGGCAGT 59.649 52.381 0.00 0.00 0.00 4.40
256 269 0.853530 ACAAAGAAGGAGGGGCAGTT 59.146 50.000 0.00 0.00 0.00 3.16
258 271 0.853530 AAAGAAGGAGGGGCAGTTGT 59.146 50.000 0.00 0.00 0.00 3.32
316 341 1.394572 CGTGATGTGCATGTGGTGTAG 59.605 52.381 0.00 0.00 0.00 2.74
320 345 2.073117 TGTGCATGTGGTGTAGTACG 57.927 50.000 0.00 0.00 0.00 3.67
321 346 1.341852 TGTGCATGTGGTGTAGTACGT 59.658 47.619 0.00 0.00 0.00 3.57
322 347 2.557490 TGTGCATGTGGTGTAGTACGTA 59.443 45.455 0.00 0.00 0.00 3.57
323 348 2.919229 GTGCATGTGGTGTAGTACGTAC 59.081 50.000 18.10 18.10 0.00 3.67
324 349 2.094597 TGCATGTGGTGTAGTACGTACC 60.095 50.000 21.80 9.84 35.05 3.34
325 350 2.094597 GCATGTGGTGTAGTACGTACCA 60.095 50.000 21.80 12.57 41.90 3.25
326 351 3.429822 GCATGTGGTGTAGTACGTACCAT 60.430 47.826 21.80 12.84 45.38 3.55
327 352 3.853831 TGTGGTGTAGTACGTACCATG 57.146 47.619 21.80 0.00 45.38 3.66
328 353 2.094597 TGTGGTGTAGTACGTACCATGC 60.095 50.000 21.80 8.92 45.38 4.06
329 354 2.094597 GTGGTGTAGTACGTACCATGCA 60.095 50.000 21.80 11.43 45.38 3.96
330 355 2.094597 TGGTGTAGTACGTACCATGCAC 60.095 50.000 21.80 21.05 39.43 4.57
331 356 2.533266 GTGTAGTACGTACCATGCACC 58.467 52.381 21.80 6.12 0.00 5.01
389 416 2.475111 TCAGCTTCAAAACGTAAGAGCG 59.525 45.455 0.00 0.00 43.62 5.03
411 485 4.499188 CGGTGAATACATCAGGACGTGTAT 60.499 45.833 0.00 0.00 41.85 2.29
415 489 8.467598 GGTGAATACATCAGGACGTGTATATAT 58.532 37.037 0.00 0.00 39.83 0.86
508 595 4.675114 GCAACTACATTTTGTTTCACGAGG 59.325 41.667 0.00 0.00 0.00 4.63
514 601 6.885735 ACATTTTGTTTCACGAGGAAAAAG 57.114 33.333 8.22 0.00 46.53 2.27
515 602 6.626302 ACATTTTGTTTCACGAGGAAAAAGA 58.374 32.000 8.22 0.00 46.53 2.52
517 604 6.937886 TTTTGTTTCACGAGGAAAAAGAAC 57.062 33.333 8.22 0.00 46.53 3.01
518 605 5.630661 TTGTTTCACGAGGAAAAAGAACA 57.369 34.783 8.22 1.73 46.53 3.18
519 606 5.828299 TGTTTCACGAGGAAAAAGAACAT 57.172 34.783 8.22 0.00 46.53 2.71
520 607 6.928979 TGTTTCACGAGGAAAAAGAACATA 57.071 33.333 8.22 0.00 46.53 2.29
521 608 6.954944 TGTTTCACGAGGAAAAAGAACATAG 58.045 36.000 8.22 0.00 46.53 2.23
567 654 9.890629 TTAGCATTACTGAATACTGACAGAAAT 57.109 29.630 10.08 0.00 37.54 2.17
576 663 8.327941 TGAATACTGACAGAAATTTCTCAAGG 57.672 34.615 17.91 9.44 34.74 3.61
610 974 1.876156 AGTTCCAAGCTTCTTTCAGCG 59.124 47.619 0.00 0.00 45.24 5.18
706 1071 4.078167 TGCTCAGGCATCCCTCAT 57.922 55.556 0.00 0.00 44.28 2.90
707 1072 1.530283 TGCTCAGGCATCCCTCATG 59.470 57.895 0.00 0.00 44.28 3.07
725 1090 5.241064 CCTCATGGGATCAAGATGAATGAAC 59.759 44.000 0.00 0.00 37.23 3.18
726 1091 6.009908 TCATGGGATCAAGATGAATGAACT 57.990 37.500 0.00 0.00 0.00 3.01
851 1222 5.522097 CCAAACTGGTTCCAAAACACATAAC 59.478 40.000 0.00 0.00 37.10 1.89
930 1301 3.055021 CCCTCAACTCCCTTCTCCTTAAC 60.055 52.174 0.00 0.00 0.00 2.01
933 1304 4.489737 TCAACTCCCTTCTCCTTAACTGA 58.510 43.478 0.00 0.00 0.00 3.41
953 1324 2.279451 TCGGCTCGATCCAATGCG 60.279 61.111 6.06 0.00 0.00 4.73
988 1359 1.887707 GCCGAATCATCCGTCCACC 60.888 63.158 0.00 0.00 0.00 4.61
991 1362 1.820581 GAATCATCCGTCCACCCGA 59.179 57.895 0.00 0.00 0.00 5.14
1008 1379 1.134788 CCGACCTCGTAAATGCCTTCT 60.135 52.381 0.00 0.00 37.74 2.85
1019 1390 1.393603 ATGCCTTCTCTCATCGACGA 58.606 50.000 0.00 0.00 0.00 4.20
1023 1394 1.095600 CTTCTCTCATCGACGACCCA 58.904 55.000 0.00 0.00 0.00 4.51
1118 1489 2.125912 CGTCGTGGGGCTCTTCAG 60.126 66.667 0.00 0.00 0.00 3.02
1710 2114 3.202097 GGAGCTCAGCATTTTCCTAGTC 58.798 50.000 17.19 0.00 0.00 2.59
1764 2177 8.163516 CGAATACCTATAGATATGATACGAGCG 58.836 40.741 0.00 0.00 0.00 5.03
1860 2277 3.451141 TCAAATTGTGTCACCTTTGCC 57.549 42.857 17.22 0.00 0.00 4.52
1864 2281 4.789012 AATTGTGTCACCTTTGCCATAG 57.211 40.909 0.00 0.00 0.00 2.23
1865 2282 2.949177 TGTGTCACCTTTGCCATAGT 57.051 45.000 0.00 0.00 0.00 2.12
1866 2283 4.359434 TTGTGTCACCTTTGCCATAGTA 57.641 40.909 0.00 0.00 0.00 1.82
1867 2284 4.359434 TGTGTCACCTTTGCCATAGTAA 57.641 40.909 0.00 0.00 0.00 2.24
1869 2286 5.133941 TGTGTCACCTTTGCCATAGTAAAA 58.866 37.500 0.00 0.00 0.00 1.52
1895 2312 7.832503 AAAAGTGAAGTGAAATGAAAACCAG 57.167 32.000 0.00 0.00 0.00 4.00
1907 2324 3.625853 TGAAAACCAGTTGTGTCATCCA 58.374 40.909 0.00 0.00 0.00 3.41
1912 2329 4.431416 ACCAGTTGTGTCATCCAAGTAA 57.569 40.909 0.00 0.00 0.00 2.24
1913 2330 4.787551 ACCAGTTGTGTCATCCAAGTAAA 58.212 39.130 0.00 0.00 0.00 2.01
1914 2331 5.385198 ACCAGTTGTGTCATCCAAGTAAAT 58.615 37.500 0.00 0.00 0.00 1.40
1915 2332 6.539173 ACCAGTTGTGTCATCCAAGTAAATA 58.461 36.000 0.00 0.00 0.00 1.40
1916 2333 6.430000 ACCAGTTGTGTCATCCAAGTAAATAC 59.570 38.462 0.00 0.00 0.00 1.89
1917 2334 6.429692 CCAGTTGTGTCATCCAAGTAAATACA 59.570 38.462 0.00 0.00 0.00 2.29
1918 2335 7.040755 CCAGTTGTGTCATCCAAGTAAATACAA 60.041 37.037 0.00 0.00 0.00 2.41
1919 2336 8.349245 CAGTTGTGTCATCCAAGTAAATACAAA 58.651 33.333 0.00 0.00 0.00 2.83
1920 2337 9.077885 AGTTGTGTCATCCAAGTAAATACAAAT 57.922 29.630 0.00 0.00 0.00 2.32
1935 2352 9.938670 GTAAATACAAATACAAATATGCGTGGA 57.061 29.630 0.00 0.00 0.00 4.02
1937 2354 5.499139 ACAAATACAAATATGCGTGGAGG 57.501 39.130 0.00 0.00 0.00 4.30
1944 2361 0.980754 ATATGCGTGGAGGGGTGTGA 60.981 55.000 0.00 0.00 0.00 3.58
1966 2561 7.119992 TGTGATACACAAAGTTTACAACAGTGT 59.880 33.333 10.76 10.76 41.69 3.55
1979 2574 3.682858 ACAACAGTGTATGTATTCGTGGC 59.317 43.478 0.00 0.00 43.00 5.01
1994 2589 0.037975 GTGGCATGGCAAAAGACCTG 60.038 55.000 25.11 0.00 0.00 4.00
1998 2593 1.200948 GCATGGCAAAAGACCTGTCTC 59.799 52.381 0.00 0.00 39.39 3.36
2003 2598 2.357952 GGCAAAAGACCTGTCTCGTTTT 59.642 45.455 0.00 0.00 39.39 2.43
2009 2604 2.864343 AGACCTGTCTCGTTTTGTTTCG 59.136 45.455 0.00 0.00 34.17 3.46
2018 2613 5.047847 TCTCGTTTTGTTTCGAAGATGAGT 58.952 37.500 0.00 0.00 35.04 3.41
2020 2615 6.036735 TCTCGTTTTGTTTCGAAGATGAGTTT 59.963 34.615 0.00 0.00 35.04 2.66
2024 2619 5.828299 TTGTTTCGAAGATGAGTTTGGTT 57.172 34.783 0.00 0.00 35.04 3.67
2025 2620 5.828299 TGTTTCGAAGATGAGTTTGGTTT 57.172 34.783 0.00 0.00 35.04 3.27
2026 2621 6.928979 TGTTTCGAAGATGAGTTTGGTTTA 57.071 33.333 0.00 0.00 35.04 2.01
2027 2622 6.954944 TGTTTCGAAGATGAGTTTGGTTTAG 58.045 36.000 0.00 0.00 35.04 1.85
2028 2623 6.540914 TGTTTCGAAGATGAGTTTGGTTTAGT 59.459 34.615 0.00 0.00 35.04 2.24
2036 2631 8.135382 AGATGAGTTTGGTTTAGTTAGCTAGA 57.865 34.615 0.00 0.00 0.00 2.43
2043 2638 6.912951 TGGTTTAGTTAGCTAGAGTCTTGT 57.087 37.500 0.00 0.00 0.00 3.16
2053 2648 8.940952 GTTAGCTAGAGTCTTGTGAATTTCAAT 58.059 33.333 0.00 0.00 0.00 2.57
2082 2677 9.185192 GCTAAACACTATTTCATGCCATAAATC 57.815 33.333 0.00 0.00 0.00 2.17
2182 2778 9.559958 GTTTGTAGTCCATTTTGATCATAACAG 57.440 33.333 0.00 0.00 0.00 3.16
2184 2780 8.267620 TGTAGTCCATTTTGATCATAACAGTG 57.732 34.615 0.00 0.00 0.00 3.66
2192 2788 2.305635 TGATCATAACAGTGGTGTGGCT 59.694 45.455 4.96 0.00 36.84 4.75
2197 2793 0.033601 AACAGTGGTGTGGCTCCAAA 60.034 50.000 0.00 0.00 36.84 3.28
2220 2816 8.457261 CAAATTTGGATATATTAGAGCAGCTCC 58.543 37.037 19.40 1.50 0.00 4.70
2221 2817 6.686484 TTTGGATATATTAGAGCAGCTCCA 57.314 37.500 19.40 1.75 0.00 3.86
2222 2818 6.686484 TTGGATATATTAGAGCAGCTCCAA 57.314 37.500 19.40 12.56 38.76 3.53
2223 2819 6.042638 TGGATATATTAGAGCAGCTCCAAC 57.957 41.667 19.40 0.00 0.00 3.77
2224 2820 5.105752 GGATATATTAGAGCAGCTCCAACG 58.894 45.833 19.40 0.00 0.00 4.10
2225 2821 5.336849 GGATATATTAGAGCAGCTCCAACGT 60.337 44.000 19.40 6.77 0.00 3.99
2226 2822 2.015736 ATTAGAGCAGCTCCAACGTG 57.984 50.000 19.40 0.00 0.00 4.49
2227 2823 0.670546 TTAGAGCAGCTCCAACGTGC 60.671 55.000 19.40 0.00 37.48 5.34
2228 2824 2.507110 TAGAGCAGCTCCAACGTGCC 62.507 60.000 19.40 0.00 37.98 5.01
2231 2827 3.414700 CAGCTCCAACGTGCCGAC 61.415 66.667 0.00 0.00 0.00 4.79
2232 2828 4.681978 AGCTCCAACGTGCCGACC 62.682 66.667 0.00 0.00 0.00 4.79
2233 2829 4.980805 GCTCCAACGTGCCGACCA 62.981 66.667 0.00 0.00 0.00 4.02
2234 2830 2.280524 CTCCAACGTGCCGACCAA 60.281 61.111 0.00 0.00 0.00 3.67
2235 2831 1.890041 CTCCAACGTGCCGACCAAA 60.890 57.895 0.00 0.00 0.00 3.28
2236 2832 1.228003 TCCAACGTGCCGACCAAAT 60.228 52.632 0.00 0.00 0.00 2.32
2237 2833 0.035036 TCCAACGTGCCGACCAAATA 59.965 50.000 0.00 0.00 0.00 1.40
2238 2834 0.446222 CCAACGTGCCGACCAAATAG 59.554 55.000 0.00 0.00 0.00 1.73
2239 2835 1.434555 CAACGTGCCGACCAAATAGA 58.565 50.000 0.00 0.00 0.00 1.98
2240 2836 1.127951 CAACGTGCCGACCAAATAGAC 59.872 52.381 0.00 0.00 0.00 2.59
2241 2837 0.319083 ACGTGCCGACCAAATAGACA 59.681 50.000 1.50 0.00 0.00 3.41
2242 2838 1.270412 ACGTGCCGACCAAATAGACAA 60.270 47.619 1.50 0.00 0.00 3.18
2243 2839 1.127951 CGTGCCGACCAAATAGACAAC 59.872 52.381 0.00 0.00 0.00 3.32
2244 2840 1.127951 GTGCCGACCAAATAGACAACG 59.872 52.381 0.00 0.00 0.00 4.10
2245 2841 1.001068 TGCCGACCAAATAGACAACGA 59.999 47.619 0.00 0.00 0.00 3.85
2246 2842 2.277084 GCCGACCAAATAGACAACGAT 58.723 47.619 0.00 0.00 0.00 3.73
2247 2843 2.676342 GCCGACCAAATAGACAACGATT 59.324 45.455 0.00 0.00 0.00 3.34
2248 2844 3.126343 GCCGACCAAATAGACAACGATTT 59.874 43.478 0.00 0.00 33.04 2.17
2249 2845 4.379082 GCCGACCAAATAGACAACGATTTT 60.379 41.667 0.00 0.00 31.07 1.82
2250 2846 5.086058 CCGACCAAATAGACAACGATTTTG 58.914 41.667 0.00 0.00 31.07 2.44
2251 2847 5.334569 CCGACCAAATAGACAACGATTTTGT 60.335 40.000 0.00 0.00 32.82 2.83
2252 2848 5.788531 CGACCAAATAGACAACGATTTTGTC 59.211 40.000 8.76 8.76 46.71 3.18
2279 2875 6.642707 TTTTTATCTGTTTGGATCGGTTGT 57.357 33.333 0.00 0.00 0.00 3.32
2280 2876 6.642707 TTTTATCTGTTTGGATCGGTTGTT 57.357 33.333 0.00 0.00 0.00 2.83
2281 2877 5.873179 TTATCTGTTTGGATCGGTTGTTC 57.127 39.130 0.00 0.00 0.00 3.18
2282 2878 2.139917 TCTGTTTGGATCGGTTGTTCG 58.860 47.619 0.00 0.00 0.00 3.95
2283 2879 0.589223 TGTTTGGATCGGTTGTTCGC 59.411 50.000 0.00 0.00 0.00 4.70
2284 2880 0.872388 GTTTGGATCGGTTGTTCGCT 59.128 50.000 0.00 0.00 0.00 4.93
2285 2881 1.136057 GTTTGGATCGGTTGTTCGCTC 60.136 52.381 0.00 0.00 0.00 5.03
2286 2882 1.011968 TTGGATCGGTTGTTCGCTCG 61.012 55.000 0.00 0.00 0.00 5.03
2287 2883 2.165301 GGATCGGTTGTTCGCTCGG 61.165 63.158 0.00 0.00 0.00 4.63
2288 2884 2.799540 GATCGGTTGTTCGCTCGGC 61.800 63.158 0.00 0.00 0.00 5.54
2302 2898 4.248402 CGGCGTCCGTTCTGTTTA 57.752 55.556 9.69 0.00 42.73 2.01
2303 2899 2.745728 CGGCGTCCGTTCTGTTTAT 58.254 52.632 9.69 0.00 42.73 1.40
2304 2900 0.368907 CGGCGTCCGTTCTGTTTATG 59.631 55.000 9.69 0.00 42.73 1.90
2305 2901 1.717194 GGCGTCCGTTCTGTTTATGA 58.283 50.000 0.00 0.00 0.00 2.15
2306 2902 2.277084 GGCGTCCGTTCTGTTTATGAT 58.723 47.619 0.00 0.00 0.00 2.45
2307 2903 2.676342 GGCGTCCGTTCTGTTTATGATT 59.324 45.455 0.00 0.00 0.00 2.57
2308 2904 3.126343 GGCGTCCGTTCTGTTTATGATTT 59.874 43.478 0.00 0.00 0.00 2.17
2309 2905 4.088648 GCGTCCGTTCTGTTTATGATTTG 58.911 43.478 0.00 0.00 0.00 2.32
2310 2906 4.647964 CGTCCGTTCTGTTTATGATTTGG 58.352 43.478 0.00 0.00 0.00 3.28
2311 2907 4.153475 CGTCCGTTCTGTTTATGATTTGGT 59.847 41.667 0.00 0.00 0.00 3.67
2312 2908 5.628134 GTCCGTTCTGTTTATGATTTGGTC 58.372 41.667 0.00 0.00 0.00 4.02
2313 2909 4.390603 TCCGTTCTGTTTATGATTTGGTCG 59.609 41.667 0.00 0.00 0.00 4.79
2314 2910 4.436852 CCGTTCTGTTTATGATTTGGTCGG 60.437 45.833 0.00 0.00 0.00 4.79
2315 2911 4.412207 GTTCTGTTTATGATTTGGTCGGC 58.588 43.478 0.00 0.00 0.00 5.54
2316 2912 3.680490 TCTGTTTATGATTTGGTCGGCA 58.320 40.909 0.00 0.00 0.00 5.69
2317 2913 4.075682 TCTGTTTATGATTTGGTCGGCAA 58.924 39.130 0.00 0.00 0.00 4.52
2318 2914 4.704540 TCTGTTTATGATTTGGTCGGCAAT 59.295 37.500 0.00 0.00 0.00 3.56
2319 2915 4.742417 TGTTTATGATTTGGTCGGCAATG 58.258 39.130 0.00 0.00 0.00 2.82
2320 2916 3.435105 TTATGATTTGGTCGGCAATGC 57.565 42.857 0.00 0.00 0.00 3.56
2321 2917 0.101040 ATGATTTGGTCGGCAATGCG 59.899 50.000 0.00 0.00 0.00 4.73
2322 2918 1.873572 GATTTGGTCGGCAATGCGC 60.874 57.895 0.00 0.00 41.28 6.09
2344 2940 5.458041 CCCAATAGGCCAACTCATATTTG 57.542 43.478 5.01 0.00 0.00 2.32
2345 2941 4.262164 CCCAATAGGCCAACTCATATTTGC 60.262 45.833 5.01 0.00 0.00 3.68
2346 2942 4.262164 CCAATAGGCCAACTCATATTTGCC 60.262 45.833 5.01 0.00 0.00 4.52
2347 2943 1.780503 AGGCCAACTCATATTTGCCC 58.219 50.000 5.01 0.00 0.00 5.36
2348 2944 0.385390 GGCCAACTCATATTTGCCCG 59.615 55.000 0.00 0.00 0.00 6.13
2349 2945 0.249031 GCCAACTCATATTTGCCCGC 60.249 55.000 0.00 0.00 0.00 6.13
2350 2946 0.029300 CCAACTCATATTTGCCCGCG 59.971 55.000 0.00 0.00 0.00 6.46
2351 2947 0.732571 CAACTCATATTTGCCCGCGT 59.267 50.000 4.92 0.00 0.00 6.01
2352 2948 0.732571 AACTCATATTTGCCCGCGTG 59.267 50.000 4.92 0.00 0.00 5.34
2353 2949 1.095228 ACTCATATTTGCCCGCGTGG 61.095 55.000 8.42 8.42 37.09 4.94
2354 2950 1.078072 TCATATTTGCCCGCGTGGT 60.078 52.632 15.14 0.00 36.04 4.16
2355 2951 1.092921 TCATATTTGCCCGCGTGGTC 61.093 55.000 15.14 0.19 36.04 4.02
2356 2952 2.177580 ATATTTGCCCGCGTGGTCG 61.178 57.895 15.14 0.00 40.37 4.79
2366 2962 3.499737 CGTGGTCGGCTTGCCATC 61.500 66.667 12.45 3.75 37.09 3.51
2367 2963 3.499737 GTGGTCGGCTTGCCATCG 61.500 66.667 12.45 0.00 37.09 3.84
2368 2964 4.015406 TGGTCGGCTTGCCATCGT 62.015 61.111 12.45 0.00 0.00 3.73
2369 2965 2.746277 GGTCGGCTTGCCATCGTT 60.746 61.111 12.45 0.00 0.00 3.85
2370 2966 2.332654 GGTCGGCTTGCCATCGTTT 61.333 57.895 12.45 0.00 0.00 3.60
2371 2967 1.579429 GTCGGCTTGCCATCGTTTT 59.421 52.632 12.45 0.00 0.00 2.43
2372 2968 0.454452 GTCGGCTTGCCATCGTTTTC 60.454 55.000 12.45 0.00 0.00 2.29
2373 2969 1.154035 CGGCTTGCCATCGTTTTCC 60.154 57.895 12.45 0.00 0.00 3.13
2374 2970 1.861542 CGGCTTGCCATCGTTTTCCA 61.862 55.000 12.45 0.00 0.00 3.53
2375 2971 0.316841 GGCTTGCCATCGTTTTCCAA 59.683 50.000 6.79 0.00 0.00 3.53
2376 2972 1.418373 GCTTGCCATCGTTTTCCAAC 58.582 50.000 0.00 0.00 0.00 3.77
2377 2973 1.269517 GCTTGCCATCGTTTTCCAACA 60.270 47.619 0.00 0.00 32.54 3.33
2378 2974 2.801342 GCTTGCCATCGTTTTCCAACAA 60.801 45.455 0.00 0.00 32.54 2.83
2379 2975 3.452474 CTTGCCATCGTTTTCCAACAAA 58.548 40.909 0.00 0.00 32.54 2.83
2380 2976 2.815478 TGCCATCGTTTTCCAACAAAC 58.185 42.857 0.00 0.00 33.90 2.93
2381 2977 2.166459 TGCCATCGTTTTCCAACAAACA 59.834 40.909 0.00 0.00 36.58 2.83
2382 2978 3.181471 TGCCATCGTTTTCCAACAAACAT 60.181 39.130 0.00 0.00 36.58 2.71
2383 2979 4.038042 TGCCATCGTTTTCCAACAAACATA 59.962 37.500 0.00 0.00 36.58 2.29
2384 2980 5.167845 GCCATCGTTTTCCAACAAACATAT 58.832 37.500 0.00 0.00 36.58 1.78
2385 2981 6.071896 TGCCATCGTTTTCCAACAAACATATA 60.072 34.615 0.00 0.00 36.58 0.86
2386 2982 6.252655 GCCATCGTTTTCCAACAAACATATAC 59.747 38.462 0.00 0.00 36.58 1.47
2387 2983 7.309177 CCATCGTTTTCCAACAAACATATACA 58.691 34.615 0.00 0.00 36.58 2.29
2388 2984 7.272515 CCATCGTTTTCCAACAAACATATACAC 59.727 37.037 0.00 0.00 36.58 2.90
2389 2985 7.260558 TCGTTTTCCAACAAACATATACACA 57.739 32.000 0.00 0.00 36.58 3.72
2390 2986 7.877003 TCGTTTTCCAACAAACATATACACAT 58.123 30.769 0.00 0.00 36.58 3.21
2391 2987 8.353684 TCGTTTTCCAACAAACATATACACATT 58.646 29.630 0.00 0.00 36.58 2.71
2392 2988 8.973378 CGTTTTCCAACAAACATATACACATTT 58.027 29.630 0.00 0.00 36.58 2.32
2429 3025 9.620660 CACAACCAAACAAAATAGTATAGTTCC 57.379 33.333 0.00 0.00 0.00 3.62
2430 3026 9.357161 ACAACCAAACAAAATAGTATAGTTCCA 57.643 29.630 0.00 0.00 0.00 3.53
2431 3027 9.620660 CAACCAAACAAAATAGTATAGTTCCAC 57.379 33.333 0.00 0.00 0.00 4.02
2432 3028 8.036273 ACCAAACAAAATAGTATAGTTCCACG 57.964 34.615 0.00 0.00 0.00 4.94
2433 3029 7.879160 ACCAAACAAAATAGTATAGTTCCACGA 59.121 33.333 0.00 0.00 0.00 4.35
2434 3030 8.173130 CCAAACAAAATAGTATAGTTCCACGAC 58.827 37.037 0.00 0.00 0.00 4.34
2435 3031 7.838771 AACAAAATAGTATAGTTCCACGACC 57.161 36.000 0.00 0.00 0.00 4.79
2436 3032 6.343703 ACAAAATAGTATAGTTCCACGACCC 58.656 40.000 0.00 0.00 0.00 4.46
2437 3033 6.070653 ACAAAATAGTATAGTTCCACGACCCA 60.071 38.462 0.00 0.00 0.00 4.51
2438 3034 6.549433 AAATAGTATAGTTCCACGACCCAA 57.451 37.500 0.00 0.00 0.00 4.12
2439 3035 6.549433 AATAGTATAGTTCCACGACCCAAA 57.451 37.500 0.00 0.00 0.00 3.28
2440 3036 6.742559 ATAGTATAGTTCCACGACCCAAAT 57.257 37.500 0.00 0.00 0.00 2.32
2441 3037 7.844493 ATAGTATAGTTCCACGACCCAAATA 57.156 36.000 0.00 0.00 0.00 1.40
2442 3038 6.549433 AGTATAGTTCCACGACCCAAATAA 57.451 37.500 0.00 0.00 0.00 1.40
2443 3039 6.949715 AGTATAGTTCCACGACCCAAATAAA 58.050 36.000 0.00 0.00 0.00 1.40
2444 3040 7.571025 AGTATAGTTCCACGACCCAAATAAAT 58.429 34.615 0.00 0.00 0.00 1.40
2445 3041 8.707449 AGTATAGTTCCACGACCCAAATAAATA 58.293 33.333 0.00 0.00 0.00 1.40
2446 3042 9.498176 GTATAGTTCCACGACCCAAATAAATAT 57.502 33.333 0.00 0.00 0.00 1.28
2449 3045 8.217131 AGTTCCACGACCCAAATAAATATAAC 57.783 34.615 0.00 0.00 0.00 1.89
2450 3046 7.830201 AGTTCCACGACCCAAATAAATATAACA 59.170 33.333 0.00 0.00 0.00 2.41
2451 3047 8.626526 GTTCCACGACCCAAATAAATATAACAT 58.373 33.333 0.00 0.00 0.00 2.71
2452 3048 9.848710 TTCCACGACCCAAATAAATATAACATA 57.151 29.630 0.00 0.00 0.00 2.29
2453 3049 9.275398 TCCACGACCCAAATAAATATAACATAC 57.725 33.333 0.00 0.00 0.00 2.39
2454 3050 9.280174 CCACGACCCAAATAAATATAACATACT 57.720 33.333 0.00 0.00 0.00 2.12
2456 3052 9.498176 ACGACCCAAATAAATATAACATACTCC 57.502 33.333 0.00 0.00 0.00 3.85
2457 3053 8.943002 CGACCCAAATAAATATAACATACTCCC 58.057 37.037 0.00 0.00 0.00 4.30
2460 3056 9.462606 CCCAAATAAATATAACATACTCCCTCC 57.537 37.037 0.00 0.00 0.00 4.30
2461 3057 9.162764 CCAAATAAATATAACATACTCCCTCCG 57.837 37.037 0.00 0.00 0.00 4.63
2462 3058 9.720769 CAAATAAATATAACATACTCCCTCCGT 57.279 33.333 0.00 0.00 0.00 4.69
2464 3060 9.939802 AATAAATATAACATACTCCCTCCGTTC 57.060 33.333 0.00 0.00 0.00 3.95
2465 3061 5.997384 ATATAACATACTCCCTCCGTTCC 57.003 43.478 0.00 0.00 0.00 3.62
2466 3062 1.946984 AACATACTCCCTCCGTTCCA 58.053 50.000 0.00 0.00 0.00 3.53
2467 3063 2.176247 ACATACTCCCTCCGTTCCAT 57.824 50.000 0.00 0.00 0.00 3.41
2468 3064 3.323774 ACATACTCCCTCCGTTCCATA 57.676 47.619 0.00 0.00 0.00 2.74
2469 3065 3.649843 ACATACTCCCTCCGTTCCATAA 58.350 45.455 0.00 0.00 0.00 1.90
2470 3066 4.232091 ACATACTCCCTCCGTTCCATAAT 58.768 43.478 0.00 0.00 0.00 1.28
2471 3067 5.399991 ACATACTCCCTCCGTTCCATAATA 58.600 41.667 0.00 0.00 0.00 0.98
2472 3068 6.023603 ACATACTCCCTCCGTTCCATAATAT 58.976 40.000 0.00 0.00 0.00 1.28
2473 3069 7.186972 ACATACTCCCTCCGTTCCATAATATA 58.813 38.462 0.00 0.00 0.00 0.86
2474 3070 7.676893 ACATACTCCCTCCGTTCCATAATATAA 59.323 37.037 0.00 0.00 0.00 0.98
2475 3071 6.607004 ACTCCCTCCGTTCCATAATATAAG 57.393 41.667 0.00 0.00 0.00 1.73
2476 3072 6.320518 ACTCCCTCCGTTCCATAATATAAGA 58.679 40.000 0.00 0.00 0.00 2.10
2477 3073 6.785963 ACTCCCTCCGTTCCATAATATAAGAA 59.214 38.462 0.00 0.00 0.00 2.52
2478 3074 7.001099 TCCCTCCGTTCCATAATATAAGAAC 57.999 40.000 5.67 5.67 36.19 3.01
2479 3075 6.555738 TCCCTCCGTTCCATAATATAAGAACA 59.444 38.462 12.74 0.00 38.80 3.18
2480 3076 7.236847 TCCCTCCGTTCCATAATATAAGAACAT 59.763 37.037 12.74 0.00 38.80 2.71
2481 3077 7.334421 CCCTCCGTTCCATAATATAAGAACATG 59.666 40.741 12.74 0.00 38.80 3.21
2482 3078 7.878127 CCTCCGTTCCATAATATAAGAACATGT 59.122 37.037 12.74 0.00 38.80 3.21
2483 3079 8.827177 TCCGTTCCATAATATAAGAACATGTC 57.173 34.615 0.00 0.00 38.80 3.06
2484 3080 8.647796 TCCGTTCCATAATATAAGAACATGTCT 58.352 33.333 0.00 0.00 38.80 3.41
2485 3081 8.712363 CCGTTCCATAATATAAGAACATGTCTG 58.288 37.037 0.00 0.64 38.80 3.51
2486 3082 9.476202 CGTTCCATAATATAAGAACATGTCTGA 57.524 33.333 0.00 0.00 38.80 3.27
2489 3085 9.764363 TCCATAATATAAGAACATGTCTGACAC 57.236 33.333 13.50 0.00 36.40 3.67
2490 3086 9.770097 CCATAATATAAGAACATGTCTGACACT 57.230 33.333 13.50 2.61 36.40 3.55
2494 3090 3.963428 AGAACATGTCTGACACTACCC 57.037 47.619 13.50 2.14 34.29 3.69
2495 3091 3.511477 AGAACATGTCTGACACTACCCT 58.489 45.455 13.50 4.40 34.29 4.34
2496 3092 4.673968 AGAACATGTCTGACACTACCCTA 58.326 43.478 13.50 0.00 34.29 3.53
2497 3093 4.707448 AGAACATGTCTGACACTACCCTAG 59.293 45.833 13.50 0.00 34.29 3.02
2498 3094 4.048970 ACATGTCTGACACTACCCTAGT 57.951 45.455 13.50 0.00 40.28 2.57
2509 3105 4.677673 ACTACCCTAGTGTCAAAAACGT 57.322 40.909 0.00 0.00 37.69 3.99
2510 3106 5.027293 ACTACCCTAGTGTCAAAAACGTT 57.973 39.130 0.00 0.00 37.69 3.99
2511 3107 5.052481 ACTACCCTAGTGTCAAAAACGTTC 58.948 41.667 0.00 0.00 37.69 3.95
2512 3108 4.146745 ACCCTAGTGTCAAAAACGTTCT 57.853 40.909 0.00 0.00 0.00 3.01
2513 3109 4.520179 ACCCTAGTGTCAAAAACGTTCTT 58.480 39.130 0.00 0.00 0.00 2.52
2514 3110 5.673514 ACCCTAGTGTCAAAAACGTTCTTA 58.326 37.500 0.00 0.00 0.00 2.10
2515 3111 6.293698 ACCCTAGTGTCAAAAACGTTCTTAT 58.706 36.000 0.00 0.00 0.00 1.73
2516 3112 7.444299 ACCCTAGTGTCAAAAACGTTCTTATA 58.556 34.615 0.00 0.00 0.00 0.98
2517 3113 8.098912 ACCCTAGTGTCAAAAACGTTCTTATAT 58.901 33.333 0.00 0.00 0.00 0.86
2518 3114 8.943002 CCCTAGTGTCAAAAACGTTCTTATATT 58.057 33.333 0.00 0.00 0.00 1.28
2532 3128 9.675464 ACGTTCTTATATTATGAAACAAAGGGA 57.325 29.630 0.00 0.00 0.00 4.20
2542 3138 9.802039 ATTATGAAACAAAGGGAGTAGTTTACA 57.198 29.630 0.00 0.00 34.62 2.41
2543 3139 9.629878 TTATGAAACAAAGGGAGTAGTTTACAA 57.370 29.630 0.00 0.00 34.62 2.41
2544 3140 7.562454 TGAAACAAAGGGAGTAGTTTACAAG 57.438 36.000 0.00 0.00 34.62 3.16
2545 3141 6.038936 TGAAACAAAGGGAGTAGTTTACAAGC 59.961 38.462 0.00 0.00 34.62 4.01
2546 3142 5.306114 ACAAAGGGAGTAGTTTACAAGCT 57.694 39.130 0.00 0.00 0.00 3.74
2547 3143 5.063880 ACAAAGGGAGTAGTTTACAAGCTG 58.936 41.667 0.00 0.00 0.00 4.24
2548 3144 5.163237 ACAAAGGGAGTAGTTTACAAGCTGA 60.163 40.000 0.00 0.00 0.00 4.26
2549 3145 5.562298 AAGGGAGTAGTTTACAAGCTGAA 57.438 39.130 0.00 0.00 0.00 3.02
2550 3146 5.763876 AGGGAGTAGTTTACAAGCTGAAT 57.236 39.130 0.00 0.00 0.00 2.57
2551 3147 6.869206 AGGGAGTAGTTTACAAGCTGAATA 57.131 37.500 0.00 0.00 0.00 1.75
2552 3148 7.253905 AGGGAGTAGTTTACAAGCTGAATAA 57.746 36.000 0.00 0.00 0.00 1.40
2553 3149 7.686434 AGGGAGTAGTTTACAAGCTGAATAAA 58.314 34.615 0.00 0.00 0.00 1.40
2554 3150 8.161425 AGGGAGTAGTTTACAAGCTGAATAAAA 58.839 33.333 0.00 0.00 0.00 1.52
2555 3151 8.789762 GGGAGTAGTTTACAAGCTGAATAAAAA 58.210 33.333 0.00 0.00 0.00 1.94
2588 3184 2.804986 TGGTTGCCAATATGAGCTCA 57.195 45.000 20.79 20.79 0.00 4.26
2589 3185 2.368439 TGGTTGCCAATATGAGCTCAC 58.632 47.619 20.97 5.61 0.00 3.51
2590 3186 2.290832 TGGTTGCCAATATGAGCTCACA 60.291 45.455 20.97 8.26 0.00 3.58
2591 3187 2.954318 GGTTGCCAATATGAGCTCACAT 59.046 45.455 20.97 10.92 0.00 3.21
2592 3188 4.136796 GGTTGCCAATATGAGCTCACATA 58.863 43.478 20.97 9.23 37.20 2.29
2593 3189 4.763793 GGTTGCCAATATGAGCTCACATAT 59.236 41.667 20.97 11.37 42.82 1.78
2594 3190 5.335426 GGTTGCCAATATGAGCTCACATATG 60.335 44.000 20.97 15.11 40.97 1.78
2595 3191 3.754850 TGCCAATATGAGCTCACATATGC 59.245 43.478 20.97 18.69 40.97 3.14
2596 3192 4.008330 GCCAATATGAGCTCACATATGCT 58.992 43.478 20.97 3.44 40.97 3.79
2603 3199 3.354948 AGCTCACATATGCTCAACCAA 57.645 42.857 1.58 0.00 33.90 3.67
2604 3200 3.689347 AGCTCACATATGCTCAACCAAA 58.311 40.909 1.58 0.00 33.90 3.28
2605 3201 4.275810 AGCTCACATATGCTCAACCAAAT 58.724 39.130 1.58 0.00 33.90 2.32
2606 3202 4.337555 AGCTCACATATGCTCAACCAAATC 59.662 41.667 1.58 0.00 33.90 2.17
2607 3203 4.096833 GCTCACATATGCTCAACCAAATCA 59.903 41.667 1.58 0.00 0.00 2.57
2608 3204 5.221185 GCTCACATATGCTCAACCAAATCAT 60.221 40.000 1.58 0.00 0.00 2.45
2609 3205 6.682113 GCTCACATATGCTCAACCAAATCATT 60.682 38.462 1.58 0.00 0.00 2.57
2610 3206 7.172868 TCACATATGCTCAACCAAATCATTT 57.827 32.000 1.58 0.00 0.00 2.32
2611 3207 7.613585 TCACATATGCTCAACCAAATCATTTT 58.386 30.769 1.58 0.00 0.00 1.82
2612 3208 7.546316 TCACATATGCTCAACCAAATCATTTTG 59.454 33.333 1.58 0.00 41.59 2.44
2613 3209 6.314400 ACATATGCTCAACCAAATCATTTTGC 59.686 34.615 1.58 0.00 40.77 3.68
2614 3210 4.069300 TGCTCAACCAAATCATTTTGCA 57.931 36.364 0.00 0.00 40.77 4.08
2615 3211 4.449131 TGCTCAACCAAATCATTTTGCAA 58.551 34.783 0.00 0.00 40.77 4.08
2616 3212 4.272991 TGCTCAACCAAATCATTTTGCAAC 59.727 37.500 0.00 0.00 40.77 4.17
2617 3213 4.512571 GCTCAACCAAATCATTTTGCAACT 59.487 37.500 0.00 0.00 40.77 3.16
2618 3214 5.559417 GCTCAACCAAATCATTTTGCAACTG 60.559 40.000 0.00 0.00 40.77 3.16
2619 3215 5.668471 TCAACCAAATCATTTTGCAACTGA 58.332 33.333 12.04 12.04 40.77 3.41
2620 3216 6.111382 TCAACCAAATCATTTTGCAACTGAA 58.889 32.000 13.30 0.07 40.77 3.02
2621 3217 6.766944 TCAACCAAATCATTTTGCAACTGAAT 59.233 30.769 13.30 2.45 40.77 2.57
2622 3218 6.548441 ACCAAATCATTTTGCAACTGAATG 57.452 33.333 13.77 13.77 40.77 2.67
2623 3219 6.056884 ACCAAATCATTTTGCAACTGAATGT 58.943 32.000 17.59 9.36 40.77 2.71
2624 3220 6.017770 ACCAAATCATTTTGCAACTGAATGTG 60.018 34.615 17.59 11.13 40.77 3.21
2625 3221 6.203145 CCAAATCATTTTGCAACTGAATGTGA 59.797 34.615 17.59 5.51 40.77 3.58
2626 3222 7.287950 CAAATCATTTTGCAACTGAATGTGAG 58.712 34.615 17.59 7.08 36.13 3.51
2627 3223 5.518848 TCATTTTGCAACTGAATGTGAGT 57.481 34.783 17.59 0.00 33.60 3.41
2628 3224 5.904941 TCATTTTGCAACTGAATGTGAGTT 58.095 33.333 17.59 0.00 33.82 3.01
2629 3225 6.339730 TCATTTTGCAACTGAATGTGAGTTT 58.660 32.000 17.59 0.00 31.05 2.66
2630 3226 6.817641 TCATTTTGCAACTGAATGTGAGTTTT 59.182 30.769 17.59 0.00 31.05 2.43
2631 3227 6.645700 TTTTGCAACTGAATGTGAGTTTTC 57.354 33.333 0.00 0.00 31.05 2.29
2632 3228 4.305989 TGCAACTGAATGTGAGTTTTCC 57.694 40.909 0.00 0.00 31.05 3.13
2633 3229 3.698539 TGCAACTGAATGTGAGTTTTCCA 59.301 39.130 0.00 0.00 31.05 3.53
2634 3230 4.341806 TGCAACTGAATGTGAGTTTTCCAT 59.658 37.500 0.00 0.00 31.05 3.41
2635 3231 5.163426 TGCAACTGAATGTGAGTTTTCCATT 60.163 36.000 0.00 0.00 31.05 3.16
2636 3232 5.403466 GCAACTGAATGTGAGTTTTCCATTC 59.597 40.000 0.00 0.00 39.21 2.67
2637 3233 6.506147 CAACTGAATGTGAGTTTTCCATTCA 58.494 36.000 12.22 12.22 42.33 2.57
2638 3234 6.076981 ACTGAATGTGAGTTTTCCATTCAC 57.923 37.500 9.53 0.00 41.18 3.18
2639 3235 5.107109 TGAATGTGAGTTTTCCATTCACG 57.893 39.130 9.53 0.00 43.12 4.35
2640 3236 3.559238 ATGTGAGTTTTCCATTCACGC 57.441 42.857 0.17 0.00 43.12 5.34
2641 3237 2.293170 TGTGAGTTTTCCATTCACGCA 58.707 42.857 0.17 0.00 43.12 5.24
2642 3238 2.884012 TGTGAGTTTTCCATTCACGCAT 59.116 40.909 0.17 0.00 43.12 4.73
2643 3239 3.317711 TGTGAGTTTTCCATTCACGCATT 59.682 39.130 0.17 0.00 43.12 3.56
2644 3240 4.202101 TGTGAGTTTTCCATTCACGCATTT 60.202 37.500 0.17 0.00 43.12 2.32
2645 3241 4.148696 GTGAGTTTTCCATTCACGCATTTG 59.851 41.667 0.00 0.00 32.81 2.32
2646 3242 4.037327 TGAGTTTTCCATTCACGCATTTGA 59.963 37.500 0.00 0.00 0.00 2.69
2647 3243 5.138125 AGTTTTCCATTCACGCATTTGAT 57.862 34.783 0.00 0.00 0.00 2.57
2648 3244 4.925054 AGTTTTCCATTCACGCATTTGATG 59.075 37.500 0.00 0.00 0.00 3.07
2649 3245 4.780275 TTTCCATTCACGCATTTGATGA 57.220 36.364 0.00 0.00 0.00 2.92
2650 3246 4.987408 TTCCATTCACGCATTTGATGAT 57.013 36.364 0.00 0.00 0.00 2.45
2651 3247 4.295857 TCCATTCACGCATTTGATGATG 57.704 40.909 0.00 0.00 0.00 3.07
2652 3248 3.946558 TCCATTCACGCATTTGATGATGA 59.053 39.130 0.00 0.00 0.00 2.92
2653 3249 4.398673 TCCATTCACGCATTTGATGATGAA 59.601 37.500 9.18 9.18 39.57 2.57
2654 3250 5.103687 CCATTCACGCATTTGATGATGAAA 58.896 37.500 10.23 0.00 39.08 2.69
2655 3251 5.751509 CCATTCACGCATTTGATGATGAAAT 59.248 36.000 10.23 0.00 39.08 2.17
2656 3252 6.256975 CCATTCACGCATTTGATGATGAAATT 59.743 34.615 10.23 0.00 39.08 1.82
2657 3253 6.635166 TTCACGCATTTGATGATGAAATTG 57.365 33.333 0.00 0.00 35.39 2.32
2658 3254 5.103687 TCACGCATTTGATGATGAAATTGG 58.896 37.500 0.00 0.00 0.00 3.16
2659 3255 4.269123 CACGCATTTGATGATGAAATTGGG 59.731 41.667 0.00 0.00 0.00 4.12
2660 3256 4.081531 ACGCATTTGATGATGAAATTGGGT 60.082 37.500 0.00 0.00 0.00 4.51
2661 3257 4.269123 CGCATTTGATGATGAAATTGGGTG 59.731 41.667 0.00 0.00 0.00 4.61
2662 3258 5.421277 GCATTTGATGATGAAATTGGGTGA 58.579 37.500 0.00 0.00 0.00 4.02
2663 3259 5.875910 GCATTTGATGATGAAATTGGGTGAA 59.124 36.000 0.00 0.00 0.00 3.18
2664 3260 6.183360 GCATTTGATGATGAAATTGGGTGAAC 60.183 38.462 0.00 0.00 0.00 3.18
2665 3261 6.669125 TTTGATGATGAAATTGGGTGAACT 57.331 33.333 0.00 0.00 0.00 3.01
2666 3262 5.648178 TGATGATGAAATTGGGTGAACTG 57.352 39.130 0.00 0.00 0.00 3.16
2667 3263 5.078949 TGATGATGAAATTGGGTGAACTGT 58.921 37.500 0.00 0.00 0.00 3.55
2668 3264 4.852134 TGATGAAATTGGGTGAACTGTG 57.148 40.909 0.00 0.00 0.00 3.66
2669 3265 3.005684 TGATGAAATTGGGTGAACTGTGC 59.994 43.478 0.00 0.00 0.00 4.57
2670 3266 2.382882 TGAAATTGGGTGAACTGTGCA 58.617 42.857 0.00 0.00 0.00 4.57
2671 3267 2.762887 TGAAATTGGGTGAACTGTGCAA 59.237 40.909 0.00 0.00 0.00 4.08
2672 3268 3.196469 TGAAATTGGGTGAACTGTGCAAA 59.804 39.130 0.00 0.00 0.00 3.68
2673 3269 2.888834 ATTGGGTGAACTGTGCAAAC 57.111 45.000 0.00 0.00 0.00 2.93
2674 3270 0.453793 TTGGGTGAACTGTGCAAACG 59.546 50.000 0.00 0.00 0.00 3.60
2675 3271 0.678366 TGGGTGAACTGTGCAAACGT 60.678 50.000 0.00 0.00 0.00 3.99
2676 3272 0.454196 GGGTGAACTGTGCAAACGTT 59.546 50.000 0.00 0.00 0.00 3.99
2677 3273 1.544686 GGTGAACTGTGCAAACGTTG 58.455 50.000 0.00 0.00 0.00 4.10
2686 3282 2.556287 CAAACGTTGCCGCTCCTC 59.444 61.111 0.00 0.00 37.70 3.71
2687 3283 2.668550 AAACGTTGCCGCTCCTCC 60.669 61.111 0.00 0.00 37.70 4.30
2688 3284 3.178540 AAACGTTGCCGCTCCTCCT 62.179 57.895 0.00 0.00 37.70 3.69
2689 3285 3.591254 AACGTTGCCGCTCCTCCTC 62.591 63.158 0.00 0.00 37.70 3.71
2690 3286 4.821589 CGTTGCCGCTCCTCCTCC 62.822 72.222 0.00 0.00 0.00 4.30
2691 3287 3.706373 GTTGCCGCTCCTCCTCCA 61.706 66.667 0.00 0.00 0.00 3.86
2692 3288 2.688666 TTGCCGCTCCTCCTCCAT 60.689 61.111 0.00 0.00 0.00 3.41
2693 3289 3.035173 TTGCCGCTCCTCCTCCATG 62.035 63.158 0.00 0.00 0.00 3.66
2694 3290 4.925861 GCCGCTCCTCCTCCATGC 62.926 72.222 0.00 0.00 0.00 4.06
2695 3291 3.160047 CCGCTCCTCCTCCATGCT 61.160 66.667 0.00 0.00 0.00 3.79
2696 3292 2.420890 CGCTCCTCCTCCATGCTC 59.579 66.667 0.00 0.00 0.00 4.26
2697 3293 2.429767 CGCTCCTCCTCCATGCTCA 61.430 63.158 0.00 0.00 0.00 4.26
2698 3294 1.446791 GCTCCTCCTCCATGCTCAG 59.553 63.158 0.00 0.00 0.00 3.35
2699 3295 2.042404 GCTCCTCCTCCATGCTCAGG 62.042 65.000 0.00 0.00 0.00 3.86
2700 3296 2.042404 CTCCTCCTCCATGCTCAGGC 62.042 65.000 0.00 0.00 39.26 4.85
2710 3306 3.114527 TGCTCAGGCACAACATTGT 57.885 47.368 0.00 0.00 44.28 2.71
2711 3307 0.953727 TGCTCAGGCACAACATTGTC 59.046 50.000 0.00 0.00 44.28 3.18
2712 3308 0.953727 GCTCAGGCACAACATTGTCA 59.046 50.000 0.00 0.00 39.91 3.58
2713 3309 1.335324 GCTCAGGCACAACATTGTCAC 60.335 52.381 0.00 0.00 39.91 3.67
2714 3310 1.267806 CTCAGGCACAACATTGTCACC 59.732 52.381 0.00 0.02 39.91 4.02
2715 3311 0.314935 CAGGCACAACATTGTCACCC 59.685 55.000 8.92 4.37 39.91 4.61
2716 3312 0.185901 AGGCACAACATTGTCACCCT 59.814 50.000 8.92 6.17 39.91 4.34
2717 3313 0.314935 GGCACAACATTGTCACCCTG 59.685 55.000 0.00 0.00 39.91 4.45
2718 3314 1.317613 GCACAACATTGTCACCCTGA 58.682 50.000 0.00 0.00 39.91 3.86
2719 3315 1.267806 GCACAACATTGTCACCCTGAG 59.732 52.381 0.00 0.00 39.91 3.35
2720 3316 2.849942 CACAACATTGTCACCCTGAGA 58.150 47.619 0.00 0.00 39.91 3.27
2721 3317 2.549754 CACAACATTGTCACCCTGAGAC 59.450 50.000 0.00 0.00 39.91 3.36
2722 3318 2.439507 ACAACATTGTCACCCTGAGACT 59.560 45.455 0.00 0.00 36.50 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 2.223340 GCAGATCAATACAAAGCACGGG 60.223 50.000 0.00 0.00 0.00 5.28
40 41 6.954616 TTTGCATTGCAGATCAATACAAAG 57.045 33.333 11.76 0.00 45.97 2.77
44 45 3.792956 CGGTTTGCATTGCAGATCAATAC 59.207 43.478 11.76 3.31 43.21 1.89
45 46 3.443329 ACGGTTTGCATTGCAGATCAATA 59.557 39.130 11.76 0.00 43.21 1.90
46 47 2.231964 ACGGTTTGCATTGCAGATCAAT 59.768 40.909 11.76 0.00 45.82 2.57
47 48 1.612950 ACGGTTTGCATTGCAGATCAA 59.387 42.857 11.76 0.18 40.61 2.57
94 102 4.100344 TGAATGAATGAATGAATGCCCAGG 59.900 41.667 0.00 0.00 0.00 4.45
141 149 0.391661 CATGTTGAGTGGAGACCGGG 60.392 60.000 6.32 0.00 0.00 5.73
189 202 4.186926 GTTTACCAAGGTAGATCGGGTTC 58.813 47.826 0.00 0.00 33.14 3.62
195 208 5.240121 TGTTTCGGTTTACCAAGGTAGATC 58.760 41.667 0.00 0.00 35.14 2.75
201 214 4.839668 TGAATGTTTCGGTTTACCAAGG 57.160 40.909 0.00 0.00 35.14 3.61
243 256 4.668138 TTAAATACAACTGCCCCTCCTT 57.332 40.909 0.00 0.00 0.00 3.36
249 262 8.705134 GTGTTGTTTAATTAAATACAACTGCCC 58.295 33.333 28.87 18.25 35.22 5.36
250 263 8.421701 CGTGTTGTTTAATTAAATACAACTGCC 58.578 33.333 28.87 20.87 35.22 4.85
253 266 7.324135 CGCCGTGTTGTTTAATTAAATACAACT 59.676 33.333 28.87 0.00 35.22 3.16
255 268 7.358066 TCGCCGTGTTGTTTAATTAAATACAA 58.642 30.769 20.94 16.14 30.18 2.41
256 269 6.895898 TCGCCGTGTTGTTTAATTAAATACA 58.104 32.000 13.54 16.11 0.00 2.29
258 271 7.693120 GTGATCGCCGTGTTGTTTAATTAAATA 59.307 33.333 13.54 8.49 0.00 1.40
311 336 2.533266 GGTGCATGGTACGTACTACAC 58.467 52.381 24.07 20.93 0.00 2.90
316 341 2.510594 CGCGGTGCATGGTACGTAC 61.511 63.158 17.56 17.56 0.00 3.67
320 345 3.496131 CACCGCGGTGCATGGTAC 61.496 66.667 42.21 0.00 39.39 3.34
321 346 4.769063 CCACCGCGGTGCATGGTA 62.769 66.667 45.23 0.00 44.16 3.25
389 416 3.247006 ACACGTCCTGATGTATTCACC 57.753 47.619 0.00 0.00 0.00 4.02
567 654 7.110155 ACTGTTTCTAAGTTGACCTTGAGAAA 58.890 34.615 0.00 0.00 34.29 2.52
576 663 5.297029 AGCTTGGAACTGTTTCTAAGTTGAC 59.703 40.000 10.89 0.00 46.80 3.18
704 1069 7.812690 TTAGTTCATTCATCTTGATCCCATG 57.187 36.000 0.00 0.00 0.00 3.66
705 1070 7.450634 CCATTAGTTCATTCATCTTGATCCCAT 59.549 37.037 0.00 0.00 0.00 4.00
706 1071 6.774170 CCATTAGTTCATTCATCTTGATCCCA 59.226 38.462 0.00 0.00 0.00 4.37
707 1072 6.774656 ACCATTAGTTCATTCATCTTGATCCC 59.225 38.462 0.00 0.00 0.00 3.85
782 1147 5.474876 ACATGGCAAAATTATCCTAGCTAGC 59.525 40.000 15.74 6.62 0.00 3.42
933 1304 1.068753 CATTGGATCGAGCCGAGCT 59.931 57.895 16.14 0.00 42.17 4.09
953 1324 1.139947 GCTGGAGTAGTGAGTCGGC 59.860 63.158 0.00 0.00 0.00 5.54
988 1359 1.134788 AGAAGGCATTTACGAGGTCGG 60.135 52.381 4.13 0.00 44.95 4.79
991 1362 2.832129 TGAGAGAAGGCATTTACGAGGT 59.168 45.455 0.00 0.00 0.00 3.85
1008 1379 2.415608 GCCTGGGTCGTCGATGAGA 61.416 63.158 7.79 0.00 0.00 3.27
1118 1489 3.595819 GCACCAGCCTGAACATCC 58.404 61.111 0.00 0.00 33.58 3.51
1710 2114 9.110502 AGTAGTTGTTTTCTTTACTTCTTCCTG 57.889 33.333 0.00 0.00 0.00 3.86
1875 2292 6.034898 CACAACTGGTTTTCATTTCACTTCAC 59.965 38.462 0.00 0.00 0.00 3.18
1877 2294 6.099341 ACACAACTGGTTTTCATTTCACTTC 58.901 36.000 0.00 0.00 0.00 3.01
1881 2298 5.651387 TGACACAACTGGTTTTCATTTCA 57.349 34.783 0.00 0.00 0.00 2.69
1882 2299 5.691754 GGATGACACAACTGGTTTTCATTTC 59.308 40.000 0.00 0.00 32.31 2.17
1886 2303 3.625853 TGGATGACACAACTGGTTTTCA 58.374 40.909 0.00 0.00 0.00 2.69
1912 2329 7.255451 CCCTCCACGCATATTTGTATTTGTATT 60.255 37.037 0.00 0.00 0.00 1.89
1913 2330 6.206634 CCCTCCACGCATATTTGTATTTGTAT 59.793 38.462 0.00 0.00 0.00 2.29
1914 2331 5.529430 CCCTCCACGCATATTTGTATTTGTA 59.471 40.000 0.00 0.00 0.00 2.41
1915 2332 4.338118 CCCTCCACGCATATTTGTATTTGT 59.662 41.667 0.00 0.00 0.00 2.83
1916 2333 4.261572 CCCCTCCACGCATATTTGTATTTG 60.262 45.833 0.00 0.00 0.00 2.32
1917 2334 3.888930 CCCCTCCACGCATATTTGTATTT 59.111 43.478 0.00 0.00 0.00 1.40
1918 2335 3.117663 ACCCCTCCACGCATATTTGTATT 60.118 43.478 0.00 0.00 0.00 1.89
1919 2336 2.441750 ACCCCTCCACGCATATTTGTAT 59.558 45.455 0.00 0.00 0.00 2.29
1920 2337 1.841277 ACCCCTCCACGCATATTTGTA 59.159 47.619 0.00 0.00 0.00 2.41
1921 2338 0.623723 ACCCCTCCACGCATATTTGT 59.376 50.000 0.00 0.00 0.00 2.83
1922 2339 1.024271 CACCCCTCCACGCATATTTG 58.976 55.000 0.00 0.00 0.00 2.32
1935 2352 8.813765 GTTGTAAACTTTGTGTATCACACCCCT 61.814 40.741 6.96 0.00 45.41 4.79
1937 2354 6.203647 GTTGTAAACTTTGTGTATCACACCC 58.796 40.000 6.96 0.00 45.41 4.61
1954 2371 6.128499 GCCACGAATACATACACTGTTGTAAA 60.128 38.462 0.00 0.00 41.64 2.01
1957 2374 3.682858 GCCACGAATACATACACTGTTGT 59.317 43.478 0.00 0.00 39.39 3.32
1958 2375 3.682377 TGCCACGAATACATACACTGTTG 59.318 43.478 0.00 0.00 39.39 3.33
1959 2376 3.932822 TGCCACGAATACATACACTGTT 58.067 40.909 0.00 0.00 39.39 3.16
1960 2377 3.603158 TGCCACGAATACATACACTGT 57.397 42.857 0.00 0.00 42.13 3.55
1961 2378 3.248363 CCATGCCACGAATACATACACTG 59.752 47.826 0.00 0.00 0.00 3.66
1966 2561 2.629336 TGCCATGCCACGAATACATA 57.371 45.000 0.00 0.00 0.00 2.29
1979 2574 1.466167 CGAGACAGGTCTTTTGCCATG 59.534 52.381 3.07 0.00 40.61 3.66
1994 2589 5.050972 ACTCATCTTCGAAACAAAACGAGAC 60.051 40.000 0.00 0.00 39.59 3.36
1998 2593 5.171337 CCAAACTCATCTTCGAAACAAAACG 59.829 40.000 0.00 0.00 0.00 3.60
2003 2598 5.828299 AAACCAAACTCATCTTCGAAACA 57.172 34.783 0.00 0.00 0.00 2.83
2009 2604 7.674471 AGCTAACTAAACCAAACTCATCTTC 57.326 36.000 0.00 0.00 0.00 2.87
2018 2613 7.656137 CACAAGACTCTAGCTAACTAAACCAAA 59.344 37.037 0.00 0.00 0.00 3.28
2020 2615 6.492429 TCACAAGACTCTAGCTAACTAAACCA 59.508 38.462 0.00 0.00 0.00 3.67
2024 2619 9.640963 GAAATTCACAAGACTCTAGCTAACTAA 57.359 33.333 0.00 0.00 0.00 2.24
2025 2620 8.803235 TGAAATTCACAAGACTCTAGCTAACTA 58.197 33.333 0.00 0.00 0.00 2.24
2026 2621 7.671302 TGAAATTCACAAGACTCTAGCTAACT 58.329 34.615 0.00 0.00 0.00 2.24
2027 2622 7.891183 TGAAATTCACAAGACTCTAGCTAAC 57.109 36.000 0.00 0.00 0.00 2.34
2028 2623 8.939929 CATTGAAATTCACAAGACTCTAGCTAA 58.060 33.333 0.00 0.00 0.00 3.09
2036 2631 5.779529 AGCACATTGAAATTCACAAGACT 57.220 34.783 0.00 0.00 0.00 3.24
2069 2664 3.148412 CCCATCACGATTTATGGCATGA 58.852 45.455 10.98 0.00 41.19 3.07
2102 2697 9.466497 CAACATCTGCCATTATTAGGGTTATAT 57.534 33.333 0.00 0.00 0.00 0.86
2106 2701 5.594317 GTCAACATCTGCCATTATTAGGGTT 59.406 40.000 0.00 0.00 0.00 4.11
2125 2720 2.358737 CCAGGCCCTCGTGTCAAC 60.359 66.667 0.00 0.00 0.00 3.18
2133 2728 1.527433 GCACTCAAAACCAGGCCCTC 61.527 60.000 0.00 0.00 0.00 4.30
2182 2778 2.153366 CAAATTTGGAGCCACACCAC 57.847 50.000 10.49 0.00 37.13 4.16
2197 2793 7.262990 TGGAGCTGCTCTAATATATCCAAAT 57.737 36.000 27.09 0.00 32.84 2.32
2206 2802 2.738643 GCACGTTGGAGCTGCTCTAATA 60.739 50.000 27.43 7.47 33.81 0.98
2224 2820 1.127951 CGTTGTCTATTTGGTCGGCAC 59.872 52.381 0.00 0.00 0.00 5.01
2225 2821 1.001068 TCGTTGTCTATTTGGTCGGCA 59.999 47.619 0.00 0.00 0.00 5.69
2226 2822 1.717194 TCGTTGTCTATTTGGTCGGC 58.283 50.000 0.00 0.00 0.00 5.54
2227 2823 4.939509 AAATCGTTGTCTATTTGGTCGG 57.060 40.909 0.00 0.00 0.00 4.79
2228 2824 5.685841 ACAAAATCGTTGTCTATTTGGTCG 58.314 37.500 0.00 0.00 35.77 4.79
2256 2852 6.642707 ACAACCGATCCAAACAGATAAAAA 57.357 33.333 0.00 0.00 0.00 1.94
2257 2853 6.566942 CGAACAACCGATCCAAACAGATAAAA 60.567 38.462 0.00 0.00 0.00 1.52
2258 2854 5.106869 CGAACAACCGATCCAAACAGATAAA 60.107 40.000 0.00 0.00 0.00 1.40
2259 2855 4.390603 CGAACAACCGATCCAAACAGATAA 59.609 41.667 0.00 0.00 0.00 1.75
2260 2856 3.930229 CGAACAACCGATCCAAACAGATA 59.070 43.478 0.00 0.00 0.00 1.98
2261 2857 2.742053 CGAACAACCGATCCAAACAGAT 59.258 45.455 0.00 0.00 0.00 2.90
2262 2858 2.139917 CGAACAACCGATCCAAACAGA 58.860 47.619 0.00 0.00 0.00 3.41
2263 2859 1.399727 GCGAACAACCGATCCAAACAG 60.400 52.381 0.00 0.00 0.00 3.16
2264 2860 0.589223 GCGAACAACCGATCCAAACA 59.411 50.000 0.00 0.00 0.00 2.83
2265 2861 0.872388 AGCGAACAACCGATCCAAAC 59.128 50.000 0.00 0.00 0.00 2.93
2266 2862 1.153353 GAGCGAACAACCGATCCAAA 58.847 50.000 0.00 0.00 38.83 3.28
2267 2863 1.011968 CGAGCGAACAACCGATCCAA 61.012 55.000 0.00 0.00 41.35 3.53
2268 2864 1.445410 CGAGCGAACAACCGATCCA 60.445 57.895 0.00 0.00 41.35 3.41
2269 2865 2.165301 CCGAGCGAACAACCGATCC 61.165 63.158 0.00 0.00 41.35 3.36
2270 2866 2.799540 GCCGAGCGAACAACCGATC 61.800 63.158 0.00 0.00 41.03 3.69
2271 2867 2.813908 GCCGAGCGAACAACCGAT 60.814 61.111 0.00 0.00 0.00 4.18
2286 2882 1.717194 TCATAAACAGAACGGACGCC 58.283 50.000 0.00 0.00 0.00 5.68
2287 2883 4.088648 CAAATCATAAACAGAACGGACGC 58.911 43.478 0.00 0.00 0.00 5.19
2288 2884 4.153475 ACCAAATCATAAACAGAACGGACG 59.847 41.667 0.00 0.00 0.00 4.79
2289 2885 5.622770 ACCAAATCATAAACAGAACGGAC 57.377 39.130 0.00 0.00 0.00 4.79
2290 2886 4.390603 CGACCAAATCATAAACAGAACGGA 59.609 41.667 0.00 0.00 0.00 4.69
2291 2887 4.436852 CCGACCAAATCATAAACAGAACGG 60.437 45.833 0.00 0.00 0.00 4.44
2292 2888 4.647964 CCGACCAAATCATAAACAGAACG 58.352 43.478 0.00 0.00 0.00 3.95
2293 2889 4.083003 TGCCGACCAAATCATAAACAGAAC 60.083 41.667 0.00 0.00 0.00 3.01
2294 2890 4.075682 TGCCGACCAAATCATAAACAGAA 58.924 39.130 0.00 0.00 0.00 3.02
2295 2891 3.680490 TGCCGACCAAATCATAAACAGA 58.320 40.909 0.00 0.00 0.00 3.41
2296 2892 4.433186 TTGCCGACCAAATCATAAACAG 57.567 40.909 0.00 0.00 0.00 3.16
2297 2893 4.742417 CATTGCCGACCAAATCATAAACA 58.258 39.130 0.00 0.00 36.92 2.83
2298 2894 3.551485 GCATTGCCGACCAAATCATAAAC 59.449 43.478 0.00 0.00 36.92 2.01
2299 2895 3.733380 CGCATTGCCGACCAAATCATAAA 60.733 43.478 2.41 0.00 36.92 1.40
2300 2896 2.223456 CGCATTGCCGACCAAATCATAA 60.223 45.455 2.41 0.00 36.92 1.90
2301 2897 1.333308 CGCATTGCCGACCAAATCATA 59.667 47.619 2.41 0.00 36.92 2.15
2302 2898 0.101040 CGCATTGCCGACCAAATCAT 59.899 50.000 2.41 0.00 36.92 2.45
2303 2899 1.505807 CGCATTGCCGACCAAATCA 59.494 52.632 2.41 0.00 36.92 2.57
2304 2900 1.873572 GCGCATTGCCGACCAAATC 60.874 57.895 0.30 0.00 36.92 2.17
2305 2901 2.181525 GCGCATTGCCGACCAAAT 59.818 55.556 0.30 0.00 36.92 2.32
2322 2918 4.262164 GCAAATATGAGTTGGCCTATTGGG 60.262 45.833 3.32 0.00 38.36 4.12
2323 2919 4.262164 GGCAAATATGAGTTGGCCTATTGG 60.262 45.833 3.32 0.00 43.69 3.16
2324 2920 4.874970 GGCAAATATGAGTTGGCCTATTG 58.125 43.478 3.32 0.00 43.69 1.90
2331 2927 0.029300 CGCGGGCAAATATGAGTTGG 59.971 55.000 0.00 0.00 0.00 3.77
2332 2928 0.732571 ACGCGGGCAAATATGAGTTG 59.267 50.000 12.47 0.00 0.00 3.16
2333 2929 0.732571 CACGCGGGCAAATATGAGTT 59.267 50.000 12.47 0.00 0.00 3.01
2334 2930 1.095228 CCACGCGGGCAAATATGAGT 61.095 55.000 12.47 0.00 0.00 3.41
2335 2931 1.095228 ACCACGCGGGCAAATATGAG 61.095 55.000 12.47 0.00 42.05 2.90
2336 2932 1.078072 ACCACGCGGGCAAATATGA 60.078 52.632 12.47 0.00 42.05 2.15
2337 2933 1.355210 GACCACGCGGGCAAATATG 59.645 57.895 12.47 0.00 41.77 1.78
2338 2934 2.177580 CGACCACGCGGGCAAATAT 61.178 57.895 12.47 0.00 42.68 1.28
2339 2935 2.816083 CGACCACGCGGGCAAATA 60.816 61.111 12.47 0.00 42.68 1.40
2349 2945 3.499737 GATGGCAAGCCGACCACG 61.500 66.667 6.60 0.00 39.19 4.94
2350 2946 3.499737 CGATGGCAAGCCGACCAC 61.500 66.667 6.60 0.00 39.19 4.16
2351 2947 3.545124 AACGATGGCAAGCCGACCA 62.545 57.895 6.60 0.00 41.06 4.02
2352 2948 1.862602 AAAACGATGGCAAGCCGACC 61.863 55.000 6.60 0.00 39.42 4.79
2353 2949 0.454452 GAAAACGATGGCAAGCCGAC 60.454 55.000 6.60 2.13 39.42 4.79
2354 2950 1.582610 GGAAAACGATGGCAAGCCGA 61.583 55.000 6.60 0.00 39.42 5.54
2355 2951 1.154035 GGAAAACGATGGCAAGCCG 60.154 57.895 6.60 0.00 39.42 5.52
2356 2952 0.316841 TTGGAAAACGATGGCAAGCC 59.683 50.000 3.61 3.61 0.00 4.35
2357 2953 1.269517 TGTTGGAAAACGATGGCAAGC 60.270 47.619 0.00 0.00 0.00 4.01
2358 2954 2.791383 TGTTGGAAAACGATGGCAAG 57.209 45.000 0.00 0.00 0.00 4.01
2359 2955 3.190874 GTTTGTTGGAAAACGATGGCAA 58.809 40.909 0.00 0.00 30.90 4.52
2360 2956 2.166459 TGTTTGTTGGAAAACGATGGCA 59.834 40.909 0.00 0.00 41.92 4.92
2361 2957 2.815478 TGTTTGTTGGAAAACGATGGC 58.185 42.857 0.00 0.00 41.92 4.40
2362 2958 7.272515 GTGTATATGTTTGTTGGAAAACGATGG 59.727 37.037 0.00 0.00 41.92 3.51
2363 2959 7.805542 TGTGTATATGTTTGTTGGAAAACGATG 59.194 33.333 0.00 0.00 41.92 3.84
2364 2960 7.877003 TGTGTATATGTTTGTTGGAAAACGAT 58.123 30.769 0.00 0.00 41.92 3.73
2365 2961 7.260558 TGTGTATATGTTTGTTGGAAAACGA 57.739 32.000 0.00 0.00 41.92 3.85
2366 2962 8.514136 AATGTGTATATGTTTGTTGGAAAACG 57.486 30.769 0.00 0.00 41.92 3.60
2403 2999 9.620660 GGAACTATACTATTTTGTTTGGTTGTG 57.379 33.333 0.00 0.00 0.00 3.33
2404 3000 9.357161 TGGAACTATACTATTTTGTTTGGTTGT 57.643 29.630 0.00 0.00 0.00 3.32
2405 3001 9.620660 GTGGAACTATACTATTTTGTTTGGTTG 57.379 33.333 0.00 0.00 0.00 3.77
2406 3002 8.508875 CGTGGAACTATACTATTTTGTTTGGTT 58.491 33.333 0.00 0.00 31.75 3.67
2407 3003 7.879160 TCGTGGAACTATACTATTTTGTTTGGT 59.121 33.333 0.00 0.00 31.75 3.67
2408 3004 8.173130 GTCGTGGAACTATACTATTTTGTTTGG 58.827 37.037 0.00 0.00 31.75 3.28
2409 3005 8.173130 GGTCGTGGAACTATACTATTTTGTTTG 58.827 37.037 0.00 0.00 31.75 2.93
2410 3006 7.335171 GGGTCGTGGAACTATACTATTTTGTTT 59.665 37.037 0.00 0.00 31.75 2.83
2411 3007 6.820152 GGGTCGTGGAACTATACTATTTTGTT 59.180 38.462 0.00 0.00 31.75 2.83
2412 3008 6.070653 TGGGTCGTGGAACTATACTATTTTGT 60.071 38.462 0.00 0.00 31.75 2.83
2413 3009 6.342906 TGGGTCGTGGAACTATACTATTTTG 58.657 40.000 0.00 0.00 31.75 2.44
2414 3010 6.549433 TGGGTCGTGGAACTATACTATTTT 57.451 37.500 0.00 0.00 31.75 1.82
2415 3011 6.549433 TTGGGTCGTGGAACTATACTATTT 57.451 37.500 0.00 0.00 31.75 1.40
2416 3012 6.549433 TTTGGGTCGTGGAACTATACTATT 57.451 37.500 0.00 0.00 31.75 1.73
2417 3013 6.742559 ATTTGGGTCGTGGAACTATACTAT 57.257 37.500 0.00 0.00 31.75 2.12
2418 3014 7.658525 TTATTTGGGTCGTGGAACTATACTA 57.341 36.000 0.00 0.00 31.75 1.82
2419 3015 6.549433 TTATTTGGGTCGTGGAACTATACT 57.451 37.500 0.00 0.00 31.75 2.12
2420 3016 7.797038 ATTTATTTGGGTCGTGGAACTATAC 57.203 36.000 0.00 0.00 31.75 1.47
2423 3019 9.328845 GTTATATTTATTTGGGTCGTGGAACTA 57.671 33.333 0.00 0.00 31.75 2.24
2424 3020 7.830201 TGTTATATTTATTTGGGTCGTGGAACT 59.170 33.333 0.00 0.00 31.75 3.01
2425 3021 7.987649 TGTTATATTTATTTGGGTCGTGGAAC 58.012 34.615 0.00 0.00 0.00 3.62
2426 3022 8.754991 ATGTTATATTTATTTGGGTCGTGGAA 57.245 30.769 0.00 0.00 0.00 3.53
2427 3023 9.275398 GTATGTTATATTTATTTGGGTCGTGGA 57.725 33.333 0.00 0.00 0.00 4.02
2428 3024 9.280174 AGTATGTTATATTTATTTGGGTCGTGG 57.720 33.333 0.00 0.00 0.00 4.94
2430 3026 9.498176 GGAGTATGTTATATTTATTTGGGTCGT 57.502 33.333 0.00 0.00 0.00 4.34
2431 3027 8.943002 GGGAGTATGTTATATTTATTTGGGTCG 58.057 37.037 0.00 0.00 0.00 4.79
2434 3030 9.462606 GGAGGGAGTATGTTATATTTATTTGGG 57.537 37.037 0.00 0.00 0.00 4.12
2435 3031 9.162764 CGGAGGGAGTATGTTATATTTATTTGG 57.837 37.037 0.00 0.00 0.00 3.28
2436 3032 9.720769 ACGGAGGGAGTATGTTATATTTATTTG 57.279 33.333 0.00 0.00 0.00 2.32
2438 3034 9.939802 GAACGGAGGGAGTATGTTATATTTATT 57.060 33.333 0.00 0.00 0.00 1.40
2439 3035 8.537858 GGAACGGAGGGAGTATGTTATATTTAT 58.462 37.037 0.00 0.00 0.00 1.40
2440 3036 7.510001 TGGAACGGAGGGAGTATGTTATATTTA 59.490 37.037 0.00 0.00 0.00 1.40
2441 3037 6.328148 TGGAACGGAGGGAGTATGTTATATTT 59.672 38.462 0.00 0.00 0.00 1.40
2442 3038 5.842328 TGGAACGGAGGGAGTATGTTATATT 59.158 40.000 0.00 0.00 0.00 1.28
2443 3039 5.399991 TGGAACGGAGGGAGTATGTTATAT 58.600 41.667 0.00 0.00 0.00 0.86
2444 3040 4.806892 TGGAACGGAGGGAGTATGTTATA 58.193 43.478 0.00 0.00 0.00 0.98
2445 3041 3.649843 TGGAACGGAGGGAGTATGTTAT 58.350 45.455 0.00 0.00 0.00 1.89
2446 3042 3.104519 TGGAACGGAGGGAGTATGTTA 57.895 47.619 0.00 0.00 0.00 2.41
2447 3043 1.946984 TGGAACGGAGGGAGTATGTT 58.053 50.000 0.00 0.00 0.00 2.71
2448 3044 2.176247 ATGGAACGGAGGGAGTATGT 57.824 50.000 0.00 0.00 0.00 2.29
2449 3045 4.891992 ATTATGGAACGGAGGGAGTATG 57.108 45.455 0.00 0.00 0.00 2.39
2450 3046 8.120538 TCTTATATTATGGAACGGAGGGAGTAT 58.879 37.037 0.00 0.00 0.00 2.12
2451 3047 7.472741 TCTTATATTATGGAACGGAGGGAGTA 58.527 38.462 0.00 0.00 0.00 2.59
2452 3048 6.320518 TCTTATATTATGGAACGGAGGGAGT 58.679 40.000 0.00 0.00 0.00 3.85
2453 3049 6.852420 TCTTATATTATGGAACGGAGGGAG 57.148 41.667 0.00 0.00 0.00 4.30
2454 3050 6.555738 TGTTCTTATATTATGGAACGGAGGGA 59.444 38.462 14.09 0.00 40.34 4.20
2455 3051 6.765403 TGTTCTTATATTATGGAACGGAGGG 58.235 40.000 14.09 0.00 40.34 4.30
2456 3052 7.878127 ACATGTTCTTATATTATGGAACGGAGG 59.122 37.037 0.00 7.02 40.34 4.30
2457 3053 8.833231 ACATGTTCTTATATTATGGAACGGAG 57.167 34.615 0.00 10.74 40.34 4.63
2458 3054 8.647796 AGACATGTTCTTATATTATGGAACGGA 58.352 33.333 0.00 4.68 40.34 4.69
2459 3055 8.712363 CAGACATGTTCTTATATTATGGAACGG 58.288 37.037 0.00 12.20 40.34 4.44
2460 3056 9.476202 TCAGACATGTTCTTATATTATGGAACG 57.524 33.333 0.00 0.00 40.34 3.95
2463 3059 9.764363 GTGTCAGACATGTTCTTATATTATGGA 57.236 33.333 6.51 0.00 28.96 3.41
2464 3060 9.770097 AGTGTCAGACATGTTCTTATATTATGG 57.230 33.333 6.51 0.00 28.96 2.74
2468 3064 8.204836 GGGTAGTGTCAGACATGTTCTTATATT 58.795 37.037 6.51 0.00 28.96 1.28
2469 3065 7.565398 AGGGTAGTGTCAGACATGTTCTTATAT 59.435 37.037 6.51 0.00 28.96 0.86
2470 3066 6.895756 AGGGTAGTGTCAGACATGTTCTTATA 59.104 38.462 6.51 0.00 28.96 0.98
2471 3067 5.721960 AGGGTAGTGTCAGACATGTTCTTAT 59.278 40.000 6.51 0.00 28.96 1.73
2472 3068 5.084519 AGGGTAGTGTCAGACATGTTCTTA 58.915 41.667 6.51 0.00 28.96 2.10
2473 3069 3.904339 AGGGTAGTGTCAGACATGTTCTT 59.096 43.478 6.51 0.00 28.96 2.52
2474 3070 3.511477 AGGGTAGTGTCAGACATGTTCT 58.489 45.455 6.51 1.47 33.33 3.01
2475 3071 3.963428 AGGGTAGTGTCAGACATGTTC 57.037 47.619 6.51 0.00 0.00 3.18
2476 3072 4.417437 ACTAGGGTAGTGTCAGACATGTT 58.583 43.478 6.51 0.00 37.69 2.71
2477 3073 4.048970 ACTAGGGTAGTGTCAGACATGT 57.951 45.455 6.51 0.00 37.69 3.21
2488 3084 4.677673 ACGTTTTTGACACTAGGGTAGT 57.322 40.909 0.00 0.00 40.28 2.73
2489 3085 5.295152 AGAACGTTTTTGACACTAGGGTAG 58.705 41.667 0.46 0.00 0.00 3.18
2490 3086 5.280654 AGAACGTTTTTGACACTAGGGTA 57.719 39.130 0.46 0.00 0.00 3.69
2491 3087 4.146745 AGAACGTTTTTGACACTAGGGT 57.853 40.909 0.00 0.00 0.00 4.34
2492 3088 6.796705 ATAAGAACGTTTTTGACACTAGGG 57.203 37.500 13.87 0.00 0.00 3.53
2506 3102 9.675464 TCCCTTTGTTTCATAATATAAGAACGT 57.325 29.630 0.00 0.00 0.00 3.99
2516 3112 9.802039 TGTAAACTACTCCCTTTGTTTCATAAT 57.198 29.630 0.00 0.00 34.88 1.28
2517 3113 9.629878 TTGTAAACTACTCCCTTTGTTTCATAA 57.370 29.630 0.00 0.00 34.88 1.90
2518 3114 9.280174 CTTGTAAACTACTCCCTTTGTTTCATA 57.720 33.333 0.00 0.00 34.88 2.15
2519 3115 7.255486 GCTTGTAAACTACTCCCTTTGTTTCAT 60.255 37.037 0.00 0.00 34.88 2.57
2520 3116 6.038936 GCTTGTAAACTACTCCCTTTGTTTCA 59.961 38.462 0.00 0.00 34.88 2.69
2521 3117 6.262496 AGCTTGTAAACTACTCCCTTTGTTTC 59.738 38.462 0.00 0.00 34.88 2.78
2522 3118 6.039382 CAGCTTGTAAACTACTCCCTTTGTTT 59.961 38.462 0.00 0.00 36.69 2.83
2523 3119 5.531287 CAGCTTGTAAACTACTCCCTTTGTT 59.469 40.000 0.00 0.00 0.00 2.83
2524 3120 5.063880 CAGCTTGTAAACTACTCCCTTTGT 58.936 41.667 0.00 0.00 0.00 2.83
2525 3121 5.305585 TCAGCTTGTAAACTACTCCCTTTG 58.694 41.667 0.00 0.00 0.00 2.77
2526 3122 5.562298 TCAGCTTGTAAACTACTCCCTTT 57.438 39.130 0.00 0.00 0.00 3.11
2527 3123 5.562298 TTCAGCTTGTAAACTACTCCCTT 57.438 39.130 0.00 0.00 0.00 3.95
2528 3124 5.763876 ATTCAGCTTGTAAACTACTCCCT 57.236 39.130 0.00 0.00 0.00 4.20
2529 3125 7.916914 TTTATTCAGCTTGTAAACTACTCCC 57.083 36.000 0.00 0.00 0.00 4.30
2569 3165 2.290832 TGTGAGCTCATATTGGCAACCA 60.291 45.455 21.47 5.94 0.00 3.67
2570 3166 2.368439 TGTGAGCTCATATTGGCAACC 58.632 47.619 21.47 3.05 0.00 3.77
2571 3167 5.696822 CATATGTGAGCTCATATTGGCAAC 58.303 41.667 28.05 9.49 38.47 4.17
2572 3168 4.216902 GCATATGTGAGCTCATATTGGCAA 59.783 41.667 28.05 12.52 38.47 4.52
2573 3169 3.754850 GCATATGTGAGCTCATATTGGCA 59.245 43.478 28.05 16.79 38.47 4.92
2574 3170 4.008330 AGCATATGTGAGCTCATATTGGC 58.992 43.478 28.05 27.40 38.47 4.52
2583 3179 3.354948 TTGGTTGAGCATATGTGAGCT 57.645 42.857 4.29 0.00 45.25 4.09
2584 3180 4.096833 TGATTTGGTTGAGCATATGTGAGC 59.903 41.667 4.29 0.00 0.00 4.26
2585 3181 5.823209 TGATTTGGTTGAGCATATGTGAG 57.177 39.130 4.29 0.00 0.00 3.51
2586 3182 6.778834 AATGATTTGGTTGAGCATATGTGA 57.221 33.333 4.29 0.00 0.00 3.58
2587 3183 7.675403 GCAAAATGATTTGGTTGAGCATATGTG 60.675 37.037 4.29 0.00 44.93 3.21
2588 3184 6.314400 GCAAAATGATTTGGTTGAGCATATGT 59.686 34.615 4.29 0.00 44.93 2.29
2589 3185 6.314152 TGCAAAATGATTTGGTTGAGCATATG 59.686 34.615 0.00 0.00 44.93 1.78
2590 3186 6.408035 TGCAAAATGATTTGGTTGAGCATAT 58.592 32.000 0.00 0.00 44.93 1.78
2591 3187 5.791666 TGCAAAATGATTTGGTTGAGCATA 58.208 33.333 0.00 0.00 44.93 3.14
2592 3188 4.643463 TGCAAAATGATTTGGTTGAGCAT 58.357 34.783 0.00 0.00 44.93 3.79
2593 3189 4.069300 TGCAAAATGATTTGGTTGAGCA 57.931 36.364 0.00 0.00 44.93 4.26
2594 3190 4.512571 AGTTGCAAAATGATTTGGTTGAGC 59.487 37.500 0.00 0.00 44.93 4.26
2595 3191 5.754406 TCAGTTGCAAAATGATTTGGTTGAG 59.246 36.000 0.00 0.00 46.99 3.02
2596 3192 5.668471 TCAGTTGCAAAATGATTTGGTTGA 58.332 33.333 0.00 0.00 46.99 3.18
2597 3193 5.987777 TCAGTTGCAAAATGATTTGGTTG 57.012 34.783 0.00 0.00 46.99 3.77
2606 3202 6.592798 AAACTCACATTCAGTTGCAAAATG 57.407 33.333 17.01 17.01 44.50 2.32
2607 3203 6.258507 GGAAAACTCACATTCAGTTGCAAAAT 59.741 34.615 0.00 0.00 34.21 1.82
2608 3204 5.580297 GGAAAACTCACATTCAGTTGCAAAA 59.420 36.000 0.00 0.00 34.21 2.44
2609 3205 5.108517 GGAAAACTCACATTCAGTTGCAAA 58.891 37.500 0.00 0.00 34.21 3.68
2610 3206 4.159321 TGGAAAACTCACATTCAGTTGCAA 59.841 37.500 0.00 0.00 34.21 4.08
2611 3207 3.698539 TGGAAAACTCACATTCAGTTGCA 59.301 39.130 0.00 0.00 34.21 4.08
2612 3208 4.305989 TGGAAAACTCACATTCAGTTGC 57.694 40.909 0.00 0.00 34.21 4.17
2613 3209 6.998258 GAATGGAAAACTCACATTCAGTTG 57.002 37.500 10.69 0.00 45.94 3.16
2618 3214 3.914364 GCGTGAATGGAAAACTCACATTC 59.086 43.478 9.09 9.09 46.52 2.67
2619 3215 3.317711 TGCGTGAATGGAAAACTCACATT 59.682 39.130 2.72 0.00 39.56 2.71
2620 3216 2.884012 TGCGTGAATGGAAAACTCACAT 59.116 40.909 2.72 0.00 39.56 3.21
2621 3217 2.293170 TGCGTGAATGGAAAACTCACA 58.707 42.857 2.72 0.00 39.56 3.58
2622 3218 3.559238 ATGCGTGAATGGAAAACTCAC 57.441 42.857 0.00 0.00 36.85 3.51
2623 3219 4.037327 TCAAATGCGTGAATGGAAAACTCA 59.963 37.500 0.00 0.00 0.00 3.41
2624 3220 4.545610 TCAAATGCGTGAATGGAAAACTC 58.454 39.130 0.00 0.00 0.00 3.01
2625 3221 4.582701 TCAAATGCGTGAATGGAAAACT 57.417 36.364 0.00 0.00 0.00 2.66
2626 3222 4.922692 TCATCAAATGCGTGAATGGAAAAC 59.077 37.500 0.00 0.00 0.00 2.43
2627 3223 5.131594 TCATCAAATGCGTGAATGGAAAA 57.868 34.783 0.00 0.00 0.00 2.29
2628 3224 4.780275 TCATCAAATGCGTGAATGGAAA 57.220 36.364 0.00 0.00 0.00 3.13
2629 3225 4.398673 TCATCATCAAATGCGTGAATGGAA 59.601 37.500 0.00 0.00 0.00 3.53
2630 3226 3.946558 TCATCATCAAATGCGTGAATGGA 59.053 39.130 0.00 0.00 0.00 3.41
2631 3227 4.295857 TCATCATCAAATGCGTGAATGG 57.704 40.909 0.00 0.00 0.00 3.16
2632 3228 6.822073 ATTTCATCATCAAATGCGTGAATG 57.178 33.333 7.77 0.00 35.82 2.67
2633 3229 6.256975 CCAATTTCATCATCAAATGCGTGAAT 59.743 34.615 7.77 0.00 35.82 2.57
2634 3230 5.577554 CCAATTTCATCATCAAATGCGTGAA 59.422 36.000 4.53 4.53 34.85 3.18
2635 3231 5.103687 CCAATTTCATCATCAAATGCGTGA 58.896 37.500 0.00 0.00 0.00 4.35
2636 3232 4.269123 CCCAATTTCATCATCAAATGCGTG 59.731 41.667 0.00 0.00 0.00 5.34
2637 3233 4.081531 ACCCAATTTCATCATCAAATGCGT 60.082 37.500 0.00 0.00 0.00 5.24
2638 3234 4.269123 CACCCAATTTCATCATCAAATGCG 59.731 41.667 0.00 0.00 0.00 4.73
2639 3235 5.421277 TCACCCAATTTCATCATCAAATGC 58.579 37.500 0.00 0.00 0.00 3.56
2640 3236 7.064134 CAGTTCACCCAATTTCATCATCAAATG 59.936 37.037 0.00 0.00 0.00 2.32
2641 3237 7.101054 CAGTTCACCCAATTTCATCATCAAAT 58.899 34.615 0.00 0.00 0.00 2.32
2642 3238 6.041865 ACAGTTCACCCAATTTCATCATCAAA 59.958 34.615 0.00 0.00 0.00 2.69
2643 3239 5.539574 ACAGTTCACCCAATTTCATCATCAA 59.460 36.000 0.00 0.00 0.00 2.57
2644 3240 5.047872 CACAGTTCACCCAATTTCATCATCA 60.048 40.000 0.00 0.00 0.00 3.07
2645 3241 5.404946 CACAGTTCACCCAATTTCATCATC 58.595 41.667 0.00 0.00 0.00 2.92
2646 3242 4.322198 GCACAGTTCACCCAATTTCATCAT 60.322 41.667 0.00 0.00 0.00 2.45
2647 3243 3.005684 GCACAGTTCACCCAATTTCATCA 59.994 43.478 0.00 0.00 0.00 3.07
2648 3244 3.005684 TGCACAGTTCACCCAATTTCATC 59.994 43.478 0.00 0.00 0.00 2.92
2649 3245 2.964464 TGCACAGTTCACCCAATTTCAT 59.036 40.909 0.00 0.00 0.00 2.57
2650 3246 2.382882 TGCACAGTTCACCCAATTTCA 58.617 42.857 0.00 0.00 0.00 2.69
2651 3247 3.451141 TTGCACAGTTCACCCAATTTC 57.549 42.857 0.00 0.00 0.00 2.17
2652 3248 3.530535 GTTTGCACAGTTCACCCAATTT 58.469 40.909 0.00 0.00 0.00 1.82
2653 3249 2.481104 CGTTTGCACAGTTCACCCAATT 60.481 45.455 0.00 0.00 0.00 2.32
2654 3250 1.066908 CGTTTGCACAGTTCACCCAAT 59.933 47.619 0.00 0.00 0.00 3.16
2655 3251 0.453793 CGTTTGCACAGTTCACCCAA 59.546 50.000 0.00 0.00 0.00 4.12
2656 3252 0.678366 ACGTTTGCACAGTTCACCCA 60.678 50.000 0.00 0.00 0.00 4.51
2657 3253 0.454196 AACGTTTGCACAGTTCACCC 59.546 50.000 0.00 0.00 0.00 4.61
2658 3254 1.544686 CAACGTTTGCACAGTTCACC 58.455 50.000 0.00 0.00 0.00 4.02
2674 3270 3.036429 ATGGAGGAGGAGCGGCAAC 62.036 63.158 1.45 0.00 0.00 4.17
2675 3271 2.688666 ATGGAGGAGGAGCGGCAA 60.689 61.111 1.45 0.00 0.00 4.52
2676 3272 3.473647 CATGGAGGAGGAGCGGCA 61.474 66.667 1.45 0.00 0.00 5.69
2677 3273 4.925861 GCATGGAGGAGGAGCGGC 62.926 72.222 0.00 0.00 0.00 6.53
2678 3274 3.160047 AGCATGGAGGAGGAGCGG 61.160 66.667 0.00 0.00 0.00 5.52
2679 3275 2.366480 CTGAGCATGGAGGAGGAGCG 62.366 65.000 0.00 0.00 0.00 5.03
2680 3276 1.446791 CTGAGCATGGAGGAGGAGC 59.553 63.158 0.00 0.00 0.00 4.70
2681 3277 2.042404 GCCTGAGCATGGAGGAGGAG 62.042 65.000 0.00 0.00 39.53 3.69
2682 3278 2.068821 GCCTGAGCATGGAGGAGGA 61.069 63.158 0.00 0.00 39.53 3.71
2683 3279 2.372890 TGCCTGAGCATGGAGGAGG 61.373 63.158 0.00 0.00 46.52 4.30
2684 3280 3.317109 TGCCTGAGCATGGAGGAG 58.683 61.111 0.00 0.00 46.52 3.69
2693 3289 0.953727 TGACAATGTTGTGCCTGAGC 59.046 50.000 2.65 0.00 42.43 4.26
2694 3290 1.267806 GGTGACAATGTTGTGCCTGAG 59.732 52.381 2.65 0.00 42.43 3.35
2695 3291 1.317613 GGTGACAATGTTGTGCCTGA 58.682 50.000 2.65 0.00 42.43 3.86
2696 3292 0.314935 GGGTGACAATGTTGTGCCTG 59.685 55.000 2.65 0.00 42.43 4.85
2697 3293 0.185901 AGGGTGACAATGTTGTGCCT 59.814 50.000 2.65 0.00 42.43 4.75
2698 3294 0.314935 CAGGGTGACAATGTTGTGCC 59.685 55.000 2.65 5.50 42.43 5.01
2699 3295 1.267806 CTCAGGGTGACAATGTTGTGC 59.732 52.381 2.65 0.00 42.43 4.57
2700 3296 2.549754 GTCTCAGGGTGACAATGTTGTG 59.450 50.000 2.65 0.00 42.43 3.33
2701 3297 2.439507 AGTCTCAGGGTGACAATGTTGT 59.560 45.455 0.00 0.00 45.65 3.32
2702 3298 3.131709 AGTCTCAGGGTGACAATGTTG 57.868 47.619 0.00 0.00 36.94 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.