Multiple sequence alignment - TraesCS4A01G225900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G225900 chr4A 100.000 3017 0 0 1 3017 534159530 534162546 0.000000e+00 5572.0
1 TraesCS4A01G225900 chr4D 91.205 1569 98 26 994 2533 62745901 62744344 0.000000e+00 2097.0
2 TraesCS4A01G225900 chr4D 90.000 360 15 6 606 959 62746243 62745899 2.130000e-121 446.0
3 TraesCS4A01G225900 chr4D 83.141 433 48 17 140 551 62746851 62746423 3.670000e-99 372.0
4 TraesCS4A01G225900 chr4D 82.697 393 55 12 2234 2619 62743857 62743471 1.340000e-88 337.0
5 TraesCS4A01G225900 chr4D 86.301 73 7 2 554 623 62746332 62746260 3.230000e-10 76.8
6 TraesCS4A01G225900 chr4B 95.122 1148 43 4 994 2140 92557470 92556335 0.000000e+00 1797.0
7 TraesCS4A01G225900 chr4B 84.348 575 62 15 1 551 92558465 92557895 3.420000e-149 538.0
8 TraesCS4A01G225900 chr4B 86.408 412 30 8 554 959 92557859 92557468 7.730000e-116 427.0
9 TraesCS4A01G225900 chr4B 85.149 101 13 2 396 496 612210164 612210262 5.320000e-18 102.0
10 TraesCS4A01G225900 chr4B 89.831 59 4 2 431 488 605953438 605953495 1.160000e-09 75.0
11 TraesCS4A01G225900 chr4B 90.698 43 3 1 449 491 659665104 659665063 4.200000e-04 56.5
12 TraesCS4A01G225900 chr2D 78.992 238 27 10 2671 2895 27492491 27492718 1.130000e-29 141.0
13 TraesCS4A01G225900 chr3A 79.330 179 30 5 322 496 111563183 111563358 5.280000e-23 119.0
14 TraesCS4A01G225900 chr2A 84.000 100 15 1 2797 2895 760475428 760475527 8.900000e-16 95.3
15 TraesCS4A01G225900 chr5A 82.653 98 14 3 392 487 328030572 328030668 1.930000e-12 84.2
16 TraesCS4A01G225900 chr5A 81.915 94 14 3 396 487 510541469 510541561 3.230000e-10 76.8
17 TraesCS4A01G225900 chrUn 81.915 94 16 1 404 497 351401930 351402022 8.970000e-11 78.7
18 TraesCS4A01G225900 chr6B 89.062 64 6 1 433 496 192931486 192931424 8.970000e-11 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G225900 chr4A 534159530 534162546 3016 False 5572.000000 5572 100.0000 1 3017 1 chr4A.!!$F1 3016
1 TraesCS4A01G225900 chr4D 62743471 62746851 3380 True 665.760000 2097 86.6688 140 2619 5 chr4D.!!$R1 2479
2 TraesCS4A01G225900 chr4B 92556335 92558465 2130 True 920.666667 1797 88.6260 1 2140 3 chr4B.!!$R2 2139


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
872 1037 0.179468 TATAAAGCACCACTCCGCCC 59.821 55.0 0.0 0.0 0.0 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2779 3787 0.037046 TCTAGAAAACCGGCCCGTTC 60.037 55.0 10.02 0.0 0.0 3.95 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 3.618690 AGTGTGAAGAGTAATGGAGGC 57.381 47.619 0.00 0.00 0.00 4.70
42 43 6.543831 GTGTGAAGAGTAATGGAGGCAATTAT 59.456 38.462 0.00 0.00 0.00 1.28
48 49 7.349598 AGAGTAATGGAGGCAATTATTCTGTT 58.650 34.615 9.98 0.00 36.07 3.16
49 50 8.494433 AGAGTAATGGAGGCAATTATTCTGTTA 58.506 33.333 9.98 0.00 36.07 2.41
50 51 9.120538 GAGTAATGGAGGCAATTATTCTGTTAA 57.879 33.333 0.00 0.00 0.00 2.01
52 53 9.683069 GTAATGGAGGCAATTATTCTGTTAATG 57.317 33.333 0.00 0.00 0.00 1.90
53 54 8.537728 AATGGAGGCAATTATTCTGTTAATGA 57.462 30.769 0.00 0.00 0.00 2.57
55 56 8.537728 TGGAGGCAATTATTCTGTTAATGATT 57.462 30.769 0.00 0.00 0.00 2.57
56 57 8.415553 TGGAGGCAATTATTCTGTTAATGATTG 58.584 33.333 9.59 9.59 36.96 2.67
86 92 5.789643 ATACAAGAAGCACATTGTTTGGT 57.210 34.783 5.87 0.00 40.09 3.67
87 93 3.784338 ACAAGAAGCACATTGTTTGGTG 58.216 40.909 3.87 0.00 36.23 4.17
88 94 3.195396 ACAAGAAGCACATTGTTTGGTGT 59.805 39.130 3.87 0.00 36.23 4.16
132 138 9.342308 CACCTAAACATCCACATATACATTTCT 57.658 33.333 0.00 0.00 0.00 2.52
137 143 9.859427 AAACATCCACATATACATTTCTGTTTG 57.141 29.630 0.00 0.00 36.79 2.93
150 156 2.821546 TCTGTTTGGTGACACTCTTCG 58.178 47.619 5.39 0.00 42.67 3.79
185 191 3.120338 CGAGTTGCAAGGCGAAAAATCTA 60.120 43.478 13.87 0.00 0.00 1.98
248 257 8.327429 CAAATACATGTTGTTTTCTTGTTGGAC 58.673 33.333 2.30 0.00 0.00 4.02
300 312 6.014242 GGGTTTTAGTATATAAGCCGGGTAGT 60.014 42.308 6.57 0.40 39.61 2.73
316 328 4.159879 CGGGTAGTCTCCTTTCTATTGTGT 59.840 45.833 0.00 0.00 0.00 3.72
345 358 5.056894 ACCGGCTATACATAAATCGTCTC 57.943 43.478 0.00 0.00 0.00 3.36
408 436 9.447157 AGATTAAGATTTGTCTTCTTTCTCCAG 57.553 33.333 0.00 0.00 35.19 3.86
410 438 5.240013 AGATTTGTCTTCTTTCTCCAGCT 57.760 39.130 0.00 0.00 0.00 4.24
414 442 3.744660 TGTCTTCTTTCTCCAGCTTTCC 58.255 45.455 0.00 0.00 0.00 3.13
416 444 4.141390 TGTCTTCTTTCTCCAGCTTTCCTT 60.141 41.667 0.00 0.00 0.00 3.36
420 448 2.751166 TTCTCCAGCTTTCCTTCTCG 57.249 50.000 0.00 0.00 0.00 4.04
423 451 1.548269 CTCCAGCTTTCCTTCTCGTCT 59.452 52.381 0.00 0.00 0.00 4.18
429 457 2.260481 CTTTCCTTCTCGTCTAACCGC 58.740 52.381 0.00 0.00 0.00 5.68
436 464 0.748729 CTCGTCTAACCGCTCCTCCT 60.749 60.000 0.00 0.00 0.00 3.69
441 469 0.760945 CTAACCGCTCCTCCTCCCAT 60.761 60.000 0.00 0.00 0.00 4.00
442 470 0.559205 TAACCGCTCCTCCTCCCATA 59.441 55.000 0.00 0.00 0.00 2.74
453 481 5.213519 TCCTCCTCCCATAAAATCGACTTA 58.786 41.667 0.00 0.00 0.00 2.24
455 483 5.934625 CCTCCTCCCATAAAATCGACTTATG 59.065 44.000 16.81 16.81 36.78 1.90
456 484 5.305585 TCCTCCCATAAAATCGACTTATGC 58.694 41.667 17.76 0.00 36.04 3.14
457 485 5.063204 CCTCCCATAAAATCGACTTATGCA 58.937 41.667 17.76 0.00 36.04 3.96
488 516 8.892723 TGCAAATTCAGTCAACTTACATATAGG 58.107 33.333 0.00 0.00 0.00 2.57
537 565 6.877236 AGAGAAAAATGCAGGTCAAAGAAAA 58.123 32.000 0.00 0.00 0.00 2.29
539 567 8.641541 AGAGAAAAATGCAGGTCAAAGAAAATA 58.358 29.630 0.00 0.00 0.00 1.40
551 579 9.367160 AGGTCAAAGAAAATAAAGAGAAATGGA 57.633 29.630 0.00 0.00 0.00 3.41
552 580 9.981114 GGTCAAAGAAAATAAAGAGAAATGGAA 57.019 29.630 0.00 0.00 0.00 3.53
604 720 1.780503 AAGCCATAGTGGATTTGCCC 58.219 50.000 0.00 0.00 44.95 5.36
628 781 6.147821 CCAAAACTCTACATATAATCAGCCCG 59.852 42.308 0.00 0.00 0.00 6.13
632 785 6.921914 ACTCTACATATAATCAGCCCGTAAC 58.078 40.000 0.00 0.00 0.00 2.50
633 786 6.720288 ACTCTACATATAATCAGCCCGTAACT 59.280 38.462 0.00 0.00 0.00 2.24
696 849 5.132897 TGGAGCAAATTTGTGTATTCACC 57.867 39.130 19.03 9.70 43.26 4.02
707 860 3.521531 TGTGTATTCACCCAGCATAAGGA 59.478 43.478 0.00 0.00 43.26 3.36
708 861 4.165950 TGTGTATTCACCCAGCATAAGGAT 59.834 41.667 0.00 0.00 43.26 3.24
709 862 4.757149 GTGTATTCACCCAGCATAAGGATC 59.243 45.833 0.00 0.00 38.51 3.36
710 863 4.411869 TGTATTCACCCAGCATAAGGATCA 59.588 41.667 0.00 0.00 0.00 2.92
711 864 4.524802 ATTCACCCAGCATAAGGATCAA 57.475 40.909 0.00 0.00 0.00 2.57
712 865 3.565764 TCACCCAGCATAAGGATCAAG 57.434 47.619 0.00 0.00 0.00 3.02
713 866 2.173356 TCACCCAGCATAAGGATCAAGG 59.827 50.000 0.00 0.00 0.00 3.61
722 875 4.378774 CATAAGGATCAAGGCACTCTCTG 58.621 47.826 0.00 0.00 38.49 3.35
743 896 5.364446 TCTGGATCCCAAATTTCCAATCATG 59.636 40.000 9.90 0.00 38.99 3.07
756 909 2.946990 CCAATCATGCAGCACACATCTA 59.053 45.455 0.00 0.00 0.00 1.98
757 910 3.242969 CCAATCATGCAGCACACATCTAC 60.243 47.826 0.00 0.00 0.00 2.59
758 911 3.555527 ATCATGCAGCACACATCTACT 57.444 42.857 0.00 0.00 0.00 2.57
759 912 4.677673 ATCATGCAGCACACATCTACTA 57.322 40.909 0.00 0.00 0.00 1.82
809 974 4.530875 AGCCATACCAAGAAGAAATGAGG 58.469 43.478 0.00 0.00 0.00 3.86
872 1037 0.179468 TATAAAGCACCACTCCGCCC 59.821 55.000 0.00 0.00 0.00 6.13
873 1038 2.869503 ATAAAGCACCACTCCGCCCG 62.870 60.000 0.00 0.00 0.00 6.13
952 1117 5.067283 GCCTCTAAGAAACCAAAACAACAGA 59.933 40.000 0.00 0.00 0.00 3.41
959 1124 7.352079 AGAAACCAAAACAACAGAAGATCAT 57.648 32.000 0.00 0.00 0.00 2.45
960 1125 7.428826 AGAAACCAAAACAACAGAAGATCATC 58.571 34.615 0.00 0.00 0.00 2.92
962 1127 6.076981 ACCAAAACAACAGAAGATCATCAC 57.923 37.500 0.10 0.00 0.00 3.06
963 1128 5.593909 ACCAAAACAACAGAAGATCATCACA 59.406 36.000 0.10 0.00 0.00 3.58
964 1129 6.096705 ACCAAAACAACAGAAGATCATCACAA 59.903 34.615 0.10 0.00 0.00 3.33
965 1130 6.639686 CCAAAACAACAGAAGATCATCACAAG 59.360 38.462 0.10 0.00 0.00 3.16
966 1131 7.420002 CAAAACAACAGAAGATCATCACAAGA 58.580 34.615 0.10 0.00 0.00 3.02
967 1132 6.551385 AACAACAGAAGATCATCACAAGAC 57.449 37.500 0.10 0.00 0.00 3.01
968 1133 5.862845 ACAACAGAAGATCATCACAAGACT 58.137 37.500 0.10 0.00 0.00 3.24
969 1134 5.931146 ACAACAGAAGATCATCACAAGACTC 59.069 40.000 0.10 0.00 0.00 3.36
970 1135 5.735285 ACAGAAGATCATCACAAGACTCA 57.265 39.130 0.10 0.00 0.00 3.41
971 1136 6.106648 ACAGAAGATCATCACAAGACTCAA 57.893 37.500 0.10 0.00 0.00 3.02
972 1137 6.528321 ACAGAAGATCATCACAAGACTCAAA 58.472 36.000 0.10 0.00 0.00 2.69
973 1138 7.166851 ACAGAAGATCATCACAAGACTCAAAT 58.833 34.615 0.10 0.00 0.00 2.32
974 1139 7.333921 ACAGAAGATCATCACAAGACTCAAATC 59.666 37.037 0.10 0.00 0.00 2.17
975 1140 7.333672 CAGAAGATCATCACAAGACTCAAATCA 59.666 37.037 0.10 0.00 0.00 2.57
976 1141 7.881751 AGAAGATCATCACAAGACTCAAATCAA 59.118 33.333 0.10 0.00 0.00 2.57
977 1142 7.612668 AGATCATCACAAGACTCAAATCAAG 57.387 36.000 0.00 0.00 0.00 3.02
978 1143 6.598457 AGATCATCACAAGACTCAAATCAAGG 59.402 38.462 0.00 0.00 0.00 3.61
979 1144 5.868454 TCATCACAAGACTCAAATCAAGGA 58.132 37.500 0.00 0.00 0.00 3.36
980 1145 6.298361 TCATCACAAGACTCAAATCAAGGAA 58.702 36.000 0.00 0.00 0.00 3.36
981 1146 6.205464 TCATCACAAGACTCAAATCAAGGAAC 59.795 38.462 0.00 0.00 0.00 3.62
982 1147 5.436175 TCACAAGACTCAAATCAAGGAACA 58.564 37.500 0.00 0.00 0.00 3.18
983 1148 6.064060 TCACAAGACTCAAATCAAGGAACAT 58.936 36.000 0.00 0.00 0.00 2.71
984 1149 6.205464 TCACAAGACTCAAATCAAGGAACATC 59.795 38.462 0.00 0.00 0.00 3.06
985 1150 6.016860 CACAAGACTCAAATCAAGGAACATCA 60.017 38.462 0.00 0.00 0.00 3.07
986 1151 6.718454 ACAAGACTCAAATCAAGGAACATCAT 59.282 34.615 0.00 0.00 0.00 2.45
987 1152 7.232127 ACAAGACTCAAATCAAGGAACATCATT 59.768 33.333 0.00 0.00 0.00 2.57
988 1153 7.154435 AGACTCAAATCAAGGAACATCATTG 57.846 36.000 0.00 0.00 39.29 2.82
989 1154 5.717119 ACTCAAATCAAGGAACATCATTGC 58.283 37.500 0.20 0.00 37.99 3.56
990 1155 5.244402 ACTCAAATCAAGGAACATCATTGCA 59.756 36.000 0.20 0.00 37.99 4.08
991 1156 6.099159 TCAAATCAAGGAACATCATTGCAA 57.901 33.333 0.00 0.00 37.99 4.08
992 1157 6.703319 TCAAATCAAGGAACATCATTGCAAT 58.297 32.000 5.99 5.99 37.99 3.56
993 1158 7.162761 TCAAATCAAGGAACATCATTGCAATT 58.837 30.769 9.83 0.00 37.99 2.32
994 1159 7.332430 TCAAATCAAGGAACATCATTGCAATTC 59.668 33.333 9.83 5.15 37.99 2.17
995 1160 5.725325 TCAAGGAACATCATTGCAATTCA 57.275 34.783 9.83 0.00 37.99 2.57
996 1161 5.472148 TCAAGGAACATCATTGCAATTCAC 58.528 37.500 9.83 0.33 37.99 3.18
997 1162 5.010820 TCAAGGAACATCATTGCAATTCACA 59.989 36.000 9.83 0.00 37.99 3.58
998 1163 5.471556 AGGAACATCATTGCAATTCACAA 57.528 34.783 9.83 0.00 0.00 3.33
999 1164 5.232463 AGGAACATCATTGCAATTCACAAC 58.768 37.500 9.83 0.81 0.00 3.32
1038 1203 1.193650 CTTCTCCGATCGCTCTCTACG 59.806 57.143 10.32 0.00 0.00 3.51
1920 2085 1.214062 GGTGTCTGTGCTCGAGGAG 59.786 63.158 15.58 0.00 0.00 3.69
2029 2194 7.556844 TCTCAGGTTGTGAAGGATTAGATTAC 58.443 38.462 0.00 0.00 33.60 1.89
2031 2196 7.331026 TCAGGTTGTGAAGGATTAGATTACTG 58.669 38.462 0.00 0.00 29.64 2.74
2040 2205 9.383519 TGAAGGATTAGATTACTGATGAACAAC 57.616 33.333 0.00 0.00 0.00 3.32
2078 2248 8.251026 TCATAGAAATCCGTGTACATATGGATC 58.749 37.037 20.80 13.76 43.90 3.36
2164 2334 6.488683 TGAAATCATAAGTCGTGGAAACCTTT 59.511 34.615 0.00 0.00 0.00 3.11
2188 2358 1.479323 CCACTTGAAAGGATGGCCATG 59.521 52.381 26.56 8.57 36.29 3.66
2192 2362 2.601240 TGAAAGGATGGCCATGTTGA 57.399 45.000 26.56 5.67 36.29 3.18
2196 2366 5.022122 TGAAAGGATGGCCATGTTGAATAA 58.978 37.500 26.56 0.00 36.29 1.40
2197 2367 5.662208 TGAAAGGATGGCCATGTTGAATAAT 59.338 36.000 26.56 0.00 36.29 1.28
2198 2368 5.540400 AAGGATGGCCATGTTGAATAATG 57.460 39.130 26.56 0.00 36.29 1.90
2199 2369 4.549668 AGGATGGCCATGTTGAATAATGT 58.450 39.130 26.56 0.00 36.29 2.71
2200 2370 4.342951 AGGATGGCCATGTTGAATAATGTG 59.657 41.667 26.56 0.00 36.29 3.21
2209 2423 7.273381 GCCATGTTGAATAATGTGTTGTAGAAC 59.727 37.037 0.00 0.00 0.00 3.01
2223 2437 5.533528 TGTTGTAGAACTTAGGGCCTTTTTC 59.466 40.000 13.45 12.22 32.79 2.29
2224 2438 5.313280 TGTAGAACTTAGGGCCTTTTTCA 57.687 39.130 13.45 0.00 0.00 2.69
2225 2439 5.697067 TGTAGAACTTAGGGCCTTTTTCAA 58.303 37.500 13.45 0.00 0.00 2.69
2226 2440 6.130569 TGTAGAACTTAGGGCCTTTTTCAAA 58.869 36.000 13.45 0.00 0.00 2.69
2227 2441 5.531122 AGAACTTAGGGCCTTTTTCAAAC 57.469 39.130 13.45 0.00 0.00 2.93
2228 2442 4.959839 AGAACTTAGGGCCTTTTTCAAACA 59.040 37.500 13.45 0.00 0.00 2.83
2229 2443 5.423931 AGAACTTAGGGCCTTTTTCAAACAA 59.576 36.000 13.45 0.00 0.00 2.83
2230 2444 5.685520 ACTTAGGGCCTTTTTCAAACAAA 57.314 34.783 13.45 0.00 0.00 2.83
2231 2445 6.056090 ACTTAGGGCCTTTTTCAAACAAAA 57.944 33.333 13.45 0.00 0.00 2.44
2232 2446 6.477253 ACTTAGGGCCTTTTTCAAACAAAAA 58.523 32.000 13.45 0.00 0.00 1.94
2262 2476 6.949352 TGGCCTTTCTGATTCATAGAATTC 57.051 37.500 3.32 0.00 34.42 2.17
2271 2485 7.688372 TCTGATTCATAGAATTCTCAAAACGC 58.312 34.615 12.24 0.00 0.00 4.84
2272 2486 7.334171 TCTGATTCATAGAATTCTCAAAACGCA 59.666 33.333 12.24 3.26 0.00 5.24
2280 2494 3.829886 TTCTCAAAACGCAGCAATAGG 57.170 42.857 0.00 0.00 0.00 2.57
2285 2499 4.938080 TCAAAACGCAGCAATAGGAAAAA 58.062 34.783 0.00 0.00 0.00 1.94
2286 2500 5.537188 TCAAAACGCAGCAATAGGAAAAAT 58.463 33.333 0.00 0.00 0.00 1.82
2287 2501 6.682746 TCAAAACGCAGCAATAGGAAAAATA 58.317 32.000 0.00 0.00 0.00 1.40
2288 2502 7.319646 TCAAAACGCAGCAATAGGAAAAATAT 58.680 30.769 0.00 0.00 0.00 1.28
2289 2503 7.275341 TCAAAACGCAGCAATAGGAAAAATATG 59.725 33.333 0.00 0.00 0.00 1.78
2290 2504 6.449635 AACGCAGCAATAGGAAAAATATGA 57.550 33.333 0.00 0.00 0.00 2.15
2291 2505 6.064846 ACGCAGCAATAGGAAAAATATGAG 57.935 37.500 0.00 0.00 0.00 2.90
2292 2506 5.822519 ACGCAGCAATAGGAAAAATATGAGA 59.177 36.000 0.00 0.00 0.00 3.27
2294 2508 7.020010 CGCAGCAATAGGAAAAATATGAGATC 58.980 38.462 0.00 0.00 0.00 2.75
2295 2509 7.020010 GCAGCAATAGGAAAAATATGAGATCG 58.980 38.462 0.00 0.00 0.00 3.69
2296 2510 7.020010 CAGCAATAGGAAAAATATGAGATCGC 58.980 38.462 0.00 0.00 0.00 4.58
2298 2512 7.020010 GCAATAGGAAAAATATGAGATCGCAG 58.980 38.462 5.15 0.00 0.00 5.18
2299 2513 7.308229 GCAATAGGAAAAATATGAGATCGCAGT 60.308 37.037 5.15 0.00 0.00 4.40
2300 2514 5.998454 AGGAAAAATATGAGATCGCAGTG 57.002 39.130 5.15 0.00 0.00 3.66
2301 2515 4.818546 AGGAAAAATATGAGATCGCAGTGG 59.181 41.667 5.15 0.00 0.00 4.00
2302 2516 4.531332 GAAAAATATGAGATCGCAGTGGC 58.469 43.478 5.15 0.00 0.00 5.01
2303 2517 2.916702 AATATGAGATCGCAGTGGCA 57.083 45.000 5.15 0.00 41.24 4.92
2304 2518 3.413846 AATATGAGATCGCAGTGGCAT 57.586 42.857 5.15 0.00 41.24 4.40
2305 2519 2.159327 TATGAGATCGCAGTGGCATG 57.841 50.000 5.15 0.00 41.24 4.06
2306 2520 1.164662 ATGAGATCGCAGTGGCATGC 61.165 55.000 9.90 9.90 42.95 4.06
2307 2521 1.523258 GAGATCGCAGTGGCATGCT 60.523 57.895 18.92 0.00 44.24 3.79
2308 2522 1.497223 GAGATCGCAGTGGCATGCTC 61.497 60.000 18.92 11.26 44.24 4.26
2309 2523 1.816679 GATCGCAGTGGCATGCTCA 60.817 57.895 18.92 11.22 44.24 4.26
2310 2524 1.153025 ATCGCAGTGGCATGCTCAT 60.153 52.632 18.92 0.00 44.24 2.90
2311 2525 0.750546 ATCGCAGTGGCATGCTCATT 60.751 50.000 18.92 7.96 44.24 2.57
2312 2526 0.961857 TCGCAGTGGCATGCTCATTT 60.962 50.000 18.92 4.28 44.24 2.32
2317 2531 4.186159 GCAGTGGCATGCTCATTTAAATT 58.814 39.130 18.92 0.00 43.07 1.82
2342 2556 7.765307 TCTATTGGATTCTTGCTTGTTTGATC 58.235 34.615 0.00 0.00 0.00 2.92
2344 2558 3.820467 TGGATTCTTGCTTGTTTGATCGT 59.180 39.130 0.00 0.00 0.00 3.73
2349 2563 5.530519 TCTTGCTTGTTTGATCGTATCAC 57.469 39.130 0.00 0.00 39.39 3.06
2385 2600 6.118852 AGTATTCCTTCCAAGAGATTTGAGC 58.881 40.000 0.00 0.00 0.00 4.26
2388 2603 2.355108 CCTTCCAAGAGATTTGAGCGGA 60.355 50.000 0.00 0.00 0.00 5.54
2403 2618 6.861065 TTGAGCGGATGATAAATTTCCTAC 57.139 37.500 0.00 0.00 0.00 3.18
2410 2625 7.519970 GCGGATGATAAATTTCCTACGAAATGT 60.520 37.037 0.00 0.00 45.92 2.71
2431 2647 8.840200 AATGTAGTACAAAGGAATCTCTAGGA 57.160 34.615 7.16 0.00 0.00 2.94
2437 2653 9.674068 AGTACAAAGGAATCTCTAGGAAAAATC 57.326 33.333 0.00 0.00 0.00 2.17
2455 2673 9.190317 GGAAAAATCCCTATATGTTTCAGTCTT 57.810 33.333 0.00 0.00 0.00 3.01
2471 2689 8.514594 GTTTCAGTCTTATGAATCCATGACAAA 58.485 33.333 0.00 0.00 38.90 2.83
2476 2694 9.857656 AGTCTTATGAATCCATGACAAACATAT 57.142 29.630 0.00 0.00 37.46 1.78
2477 2695 9.888878 GTCTTATGAATCCATGACAAACATATG 57.111 33.333 0.00 0.00 37.46 1.78
2512 3520 8.697507 AGGATTCTAACCATCCAAATTCATAC 57.302 34.615 1.89 0.00 42.63 2.39
2533 3541 4.304939 ACGAAAGTCCTTTAAGTCGAAGG 58.695 43.478 8.52 0.00 44.19 3.46
2547 3555 2.168728 GTCGAAGGAGCCCTTGAGTTAT 59.831 50.000 10.77 0.00 44.82 1.89
2551 3559 2.467880 AGGAGCCCTTGAGTTATTCGA 58.532 47.619 0.00 0.00 0.00 3.71
2584 3592 2.158914 AGCCCTTGAGTTTGCCTTTTTG 60.159 45.455 0.00 0.00 0.00 2.44
2588 3596 4.252878 CCTTGAGTTTGCCTTTTTGTTGT 58.747 39.130 0.00 0.00 0.00 3.32
2623 3631 9.775854 ATAACCACATTTGATTTGATTTTGACA 57.224 25.926 0.00 0.00 0.00 3.58
2624 3632 8.503458 AACCACATTTGATTTGATTTTGACAA 57.497 26.923 0.00 0.00 0.00 3.18
2625 3633 8.503458 ACCACATTTGATTTGATTTTGACAAA 57.497 26.923 0.00 0.00 40.62 2.83
2626 3634 8.614346 ACCACATTTGATTTGATTTTGACAAAG 58.386 29.630 0.10 0.00 39.90 2.77
2627 3635 8.614346 CCACATTTGATTTGATTTTGACAAAGT 58.386 29.630 0.10 0.00 39.90 2.66
2633 3641 9.959749 TTGATTTGATTTTGACAAAGTAGGTAC 57.040 29.630 0.10 0.00 39.90 3.34
2634 3642 9.126151 TGATTTGATTTTGACAAAGTAGGTACA 57.874 29.630 0.10 0.00 39.90 2.90
2636 3644 9.912634 ATTTGATTTTGACAAAGTAGGTACATG 57.087 29.630 0.10 0.00 39.90 3.21
2637 3645 6.908825 TGATTTTGACAAAGTAGGTACATGC 58.091 36.000 0.10 0.00 0.00 4.06
2638 3646 6.488344 TGATTTTGACAAAGTAGGTACATGCA 59.512 34.615 0.10 0.00 0.00 3.96
2639 3647 5.682943 TTTGACAAAGTAGGTACATGCAC 57.317 39.130 0.00 0.00 0.00 4.57
2640 3648 4.617253 TGACAAAGTAGGTACATGCACT 57.383 40.909 0.00 0.00 0.00 4.40
2641 3649 4.314961 TGACAAAGTAGGTACATGCACTG 58.685 43.478 0.00 0.00 0.00 3.66
2642 3650 4.202315 TGACAAAGTAGGTACATGCACTGT 60.202 41.667 0.00 0.56 42.13 3.55
2643 3651 5.011227 TGACAAAGTAGGTACATGCACTGTA 59.989 40.000 0.00 0.00 39.39 2.74
2672 3680 8.810652 TTTTAGACTGTTCATTACCATTTTGC 57.189 30.769 0.00 0.00 0.00 3.68
2673 3681 5.391312 AGACTGTTCATTACCATTTTGCC 57.609 39.130 0.00 0.00 0.00 4.52
2674 3682 5.079643 AGACTGTTCATTACCATTTTGCCT 58.920 37.500 0.00 0.00 0.00 4.75
2675 3683 6.245408 AGACTGTTCATTACCATTTTGCCTA 58.755 36.000 0.00 0.00 0.00 3.93
2676 3684 6.719370 AGACTGTTCATTACCATTTTGCCTAA 59.281 34.615 0.00 0.00 0.00 2.69
2677 3685 7.397192 AGACTGTTCATTACCATTTTGCCTAAT 59.603 33.333 0.00 0.00 0.00 1.73
2678 3686 7.906327 ACTGTTCATTACCATTTTGCCTAATT 58.094 30.769 0.00 0.00 0.00 1.40
2679 3687 9.030452 ACTGTTCATTACCATTTTGCCTAATTA 57.970 29.630 0.00 0.00 0.00 1.40
2680 3688 9.868277 CTGTTCATTACCATTTTGCCTAATTAA 57.132 29.630 0.00 0.00 0.00 1.40
2708 3716 3.719144 CCGAACCGGCGGTCAAAC 61.719 66.667 34.23 21.31 46.07 2.93
2709 3717 3.719144 CGAACCGGCGGTCAAACC 61.719 66.667 34.23 17.21 33.12 3.27
2710 3718 2.592287 GAACCGGCGGTCAAACCA 60.592 61.111 34.23 0.00 38.47 3.67
2711 3719 2.593436 AACCGGCGGTCAAACCAG 60.593 61.111 34.23 1.58 38.47 4.00
2712 3720 4.636435 ACCGGCGGTCAAACCAGG 62.636 66.667 28.83 0.00 38.47 4.45
2713 3721 4.323477 CCGGCGGTCAAACCAGGA 62.323 66.667 19.97 0.00 38.47 3.86
2714 3722 2.281208 CGGCGGTCAAACCAGGAA 60.281 61.111 0.00 0.00 38.47 3.36
2715 3723 1.894756 CGGCGGTCAAACCAGGAAA 60.895 57.895 0.00 0.00 38.47 3.13
2716 3724 1.448922 CGGCGGTCAAACCAGGAAAA 61.449 55.000 0.00 0.00 38.47 2.29
2717 3725 0.747852 GGCGGTCAAACCAGGAAAAA 59.252 50.000 0.00 0.00 38.47 1.94
2718 3726 1.537348 GGCGGTCAAACCAGGAAAAAC 60.537 52.381 0.00 0.00 38.47 2.43
2719 3727 1.537348 GCGGTCAAACCAGGAAAAACC 60.537 52.381 0.00 0.00 38.47 3.27
2720 3728 1.268845 CGGTCAAACCAGGAAAAACCG 60.269 52.381 11.84 11.84 38.47 4.44
2721 3729 1.067974 GGTCAAACCAGGAAAAACCGG 59.932 52.381 0.00 0.00 44.74 5.28
2722 3730 2.025898 GTCAAACCAGGAAAAACCGGA 58.974 47.619 9.46 0.00 44.74 5.14
2723 3731 2.427812 GTCAAACCAGGAAAAACCGGAA 59.572 45.455 9.46 0.00 44.74 4.30
2724 3732 2.427812 TCAAACCAGGAAAAACCGGAAC 59.572 45.455 9.46 0.00 44.74 3.62
2725 3733 1.405872 AACCAGGAAAAACCGGAACC 58.594 50.000 9.46 3.62 44.74 3.62
2726 3734 0.820482 ACCAGGAAAAACCGGAACCG 60.820 55.000 9.46 6.25 44.74 4.44
2736 3744 4.323477 CGGAACCGGTGGCCTCAA 62.323 66.667 20.77 0.00 35.56 3.02
2737 3745 2.355115 GGAACCGGTGGCCTCAAT 59.645 61.111 8.52 0.00 0.00 2.57
2738 3746 1.605453 GGAACCGGTGGCCTCAATA 59.395 57.895 8.52 0.00 0.00 1.90
2739 3747 0.463833 GGAACCGGTGGCCTCAATAG 60.464 60.000 8.52 0.00 0.00 1.73
2740 3748 0.252197 GAACCGGTGGCCTCAATAGT 59.748 55.000 8.52 0.00 0.00 2.12
2741 3749 0.696501 AACCGGTGGCCTCAATAGTT 59.303 50.000 8.52 0.00 0.00 2.24
2742 3750 0.252197 ACCGGTGGCCTCAATAGTTC 59.748 55.000 6.12 0.00 0.00 3.01
2743 3751 0.541863 CCGGTGGCCTCAATAGTTCT 59.458 55.000 3.32 0.00 0.00 3.01
2744 3752 1.065418 CCGGTGGCCTCAATAGTTCTT 60.065 52.381 3.32 0.00 0.00 2.52
2745 3753 2.618045 CCGGTGGCCTCAATAGTTCTTT 60.618 50.000 3.32 0.00 0.00 2.52
2746 3754 3.370103 CCGGTGGCCTCAATAGTTCTTTA 60.370 47.826 3.32 0.00 0.00 1.85
2747 3755 4.258543 CGGTGGCCTCAATAGTTCTTTAA 58.741 43.478 3.32 0.00 0.00 1.52
2748 3756 4.332819 CGGTGGCCTCAATAGTTCTTTAAG 59.667 45.833 3.32 0.00 0.00 1.85
2749 3757 4.096532 GGTGGCCTCAATAGTTCTTTAAGC 59.903 45.833 3.32 0.00 0.00 3.09
2750 3758 4.944317 GTGGCCTCAATAGTTCTTTAAGCT 59.056 41.667 3.32 0.00 0.00 3.74
2751 3759 6.113411 GTGGCCTCAATAGTTCTTTAAGCTA 58.887 40.000 3.32 0.00 0.00 3.32
2752 3760 6.598064 GTGGCCTCAATAGTTCTTTAAGCTAA 59.402 38.462 3.32 0.00 0.00 3.09
2753 3761 7.283354 GTGGCCTCAATAGTTCTTTAAGCTAAT 59.717 37.037 3.32 0.00 0.00 1.73
2754 3762 8.491134 TGGCCTCAATAGTTCTTTAAGCTAATA 58.509 33.333 3.32 0.00 0.00 0.98
2755 3763 9.338622 GGCCTCAATAGTTCTTTAAGCTAATAA 57.661 33.333 0.00 0.00 0.00 1.40
2776 3784 8.822652 AATAAGACCGTTATATAGAAAACCGG 57.177 34.615 0.00 0.00 0.00 5.28
2777 3785 5.859205 AGACCGTTATATAGAAAACCGGT 57.141 39.130 11.67 11.67 36.17 5.28
2778 3786 6.225981 AGACCGTTATATAGAAAACCGGTT 57.774 37.500 15.86 15.86 34.75 4.44
2779 3787 6.044682 AGACCGTTATATAGAAAACCGGTTG 58.955 40.000 23.08 5.72 34.75 3.77
2780 3788 5.976458 ACCGTTATATAGAAAACCGGTTGA 58.024 37.500 23.08 7.29 32.46 3.18
2781 3789 6.405538 ACCGTTATATAGAAAACCGGTTGAA 58.594 36.000 23.08 7.12 32.46 2.69
2782 3790 6.313658 ACCGTTATATAGAAAACCGGTTGAAC 59.686 38.462 23.08 14.93 32.46 3.18
2783 3791 6.405216 CGTTATATAGAAAACCGGTTGAACG 58.595 40.000 23.08 19.59 0.00 3.95
2792 3800 2.908428 GGTTGAACGGGCCGGTTT 60.908 61.111 31.78 16.89 0.00 3.27
2793 3801 2.491897 GGTTGAACGGGCCGGTTTT 61.492 57.895 31.78 16.05 0.00 2.43
2794 3802 1.008194 GTTGAACGGGCCGGTTTTC 60.008 57.895 31.78 23.91 0.00 2.29
2795 3803 1.152922 TTGAACGGGCCGGTTTTCT 60.153 52.632 31.78 7.61 0.00 2.52
2796 3804 0.108207 TTGAACGGGCCGGTTTTCTA 59.892 50.000 31.78 18.18 0.00 2.10
2797 3805 0.320946 TGAACGGGCCGGTTTTCTAG 60.321 55.000 31.78 0.00 0.00 2.43
2798 3806 0.037046 GAACGGGCCGGTTTTCTAGA 60.037 55.000 31.78 0.00 0.00 2.43
2799 3807 0.397564 AACGGGCCGGTTTTCTAGAA 59.602 50.000 31.78 0.00 0.00 2.10
2800 3808 0.397564 ACGGGCCGGTTTTCTAGAAA 59.602 50.000 31.78 13.99 0.00 2.52
2801 3809 1.202794 ACGGGCCGGTTTTCTAGAAAA 60.203 47.619 31.78 23.65 37.90 2.29
2814 3822 6.459670 TTTCTAGAAAACCAGTGAAAACCC 57.540 37.500 15.57 0.00 0.00 4.11
2815 3823 5.118729 TCTAGAAAACCAGTGAAAACCCA 57.881 39.130 0.00 0.00 0.00 4.51
2816 3824 5.130350 TCTAGAAAACCAGTGAAAACCCAG 58.870 41.667 0.00 0.00 0.00 4.45
2817 3825 3.031013 AGAAAACCAGTGAAAACCCAGG 58.969 45.455 0.00 0.00 0.00 4.45
2818 3826 1.119684 AAACCAGTGAAAACCCAGGC 58.880 50.000 0.00 0.00 0.00 4.85
2819 3827 0.759060 AACCAGTGAAAACCCAGGCC 60.759 55.000 0.00 0.00 0.00 5.19
2820 3828 1.152567 CCAGTGAAAACCCAGGCCA 60.153 57.895 5.01 0.00 0.00 5.36
2821 3829 0.542702 CCAGTGAAAACCCAGGCCAT 60.543 55.000 5.01 0.00 0.00 4.40
2822 3830 1.341080 CAGTGAAAACCCAGGCCATT 58.659 50.000 5.01 0.00 0.00 3.16
2823 3831 1.001181 CAGTGAAAACCCAGGCCATTG 59.999 52.381 5.01 0.00 0.00 2.82
2824 3832 1.133199 AGTGAAAACCCAGGCCATTGA 60.133 47.619 5.01 0.00 0.00 2.57
2825 3833 1.691434 GTGAAAACCCAGGCCATTGAA 59.309 47.619 5.01 0.00 0.00 2.69
2826 3834 1.691434 TGAAAACCCAGGCCATTGAAC 59.309 47.619 5.01 0.00 0.00 3.18
2827 3835 1.001974 GAAAACCCAGGCCATTGAACC 59.998 52.381 5.01 0.00 0.00 3.62
2828 3836 1.184970 AAACCCAGGCCATTGAACCG 61.185 55.000 5.01 0.00 0.00 4.44
2829 3837 2.755469 CCCAGGCCATTGAACCGG 60.755 66.667 5.01 0.00 0.00 5.28
2830 3838 2.354729 CCAGGCCATTGAACCGGA 59.645 61.111 9.46 0.00 0.00 5.14
2831 3839 1.304052 CCAGGCCATTGAACCGGAA 60.304 57.895 9.46 0.00 0.00 4.30
2832 3840 0.897863 CCAGGCCATTGAACCGGAAA 60.898 55.000 9.46 0.00 0.00 3.13
2833 3841 0.965439 CAGGCCATTGAACCGGAAAA 59.035 50.000 9.46 0.00 0.00 2.29
2834 3842 1.342819 CAGGCCATTGAACCGGAAAAA 59.657 47.619 9.46 0.00 0.00 1.94
2871 3879 7.784633 TTCTAAAAGAAATTGGCAAAAGTGG 57.215 32.000 3.01 0.00 29.99 4.00
2872 3880 7.118496 TCTAAAAGAAATTGGCAAAAGTGGA 57.882 32.000 3.01 0.00 0.00 4.02
2873 3881 7.560368 TCTAAAAGAAATTGGCAAAAGTGGAA 58.440 30.769 3.01 0.00 0.00 3.53
2874 3882 8.210265 TCTAAAAGAAATTGGCAAAAGTGGAAT 58.790 29.630 3.01 0.00 0.00 3.01
2875 3883 7.643569 AAAAGAAATTGGCAAAAGTGGAATT 57.356 28.000 3.01 0.00 0.00 2.17
2876 3884 6.866010 AAGAAATTGGCAAAAGTGGAATTC 57.134 33.333 3.01 0.00 0.00 2.17
2877 3885 4.990426 AGAAATTGGCAAAAGTGGAATTCG 59.010 37.500 3.01 0.00 0.00 3.34
2878 3886 4.599047 AATTGGCAAAAGTGGAATTCGA 57.401 36.364 3.01 0.00 0.00 3.71
2879 3887 4.806640 ATTGGCAAAAGTGGAATTCGAT 57.193 36.364 3.01 0.00 0.00 3.59
2880 3888 3.848272 TGGCAAAAGTGGAATTCGATC 57.152 42.857 0.00 0.00 0.00 3.69
2881 3889 2.491693 TGGCAAAAGTGGAATTCGATCC 59.508 45.455 0.00 0.00 40.10 3.36
2882 3890 2.159240 GGCAAAAGTGGAATTCGATCCC 60.159 50.000 2.62 0.00 38.82 3.85
2883 3891 2.491693 GCAAAAGTGGAATTCGATCCCA 59.508 45.455 2.62 0.06 38.82 4.37
2884 3892 3.428045 GCAAAAGTGGAATTCGATCCCAG 60.428 47.826 2.62 0.00 38.82 4.45
2885 3893 2.717639 AAGTGGAATTCGATCCCAGG 57.282 50.000 2.62 0.00 38.82 4.45
2886 3894 1.584724 AGTGGAATTCGATCCCAGGT 58.415 50.000 2.62 0.00 38.82 4.00
2887 3895 1.486726 AGTGGAATTCGATCCCAGGTC 59.513 52.381 2.62 0.00 38.82 3.85
2888 3896 1.209504 GTGGAATTCGATCCCAGGTCA 59.790 52.381 2.62 0.00 38.82 4.02
2889 3897 2.126882 TGGAATTCGATCCCAGGTCAT 58.873 47.619 2.62 0.00 38.82 3.06
2890 3898 2.158769 TGGAATTCGATCCCAGGTCATG 60.159 50.000 2.62 0.00 38.82 3.07
2891 3899 2.158755 GGAATTCGATCCCAGGTCATGT 60.159 50.000 0.00 0.00 33.05 3.21
2892 3900 2.627515 ATTCGATCCCAGGTCATGTG 57.372 50.000 0.00 0.00 0.00 3.21
2893 3901 1.567357 TTCGATCCCAGGTCATGTGA 58.433 50.000 0.00 0.00 0.00 3.58
2894 3902 1.114627 TCGATCCCAGGTCATGTGAG 58.885 55.000 0.00 0.00 0.00 3.51
2895 3903 0.105593 CGATCCCAGGTCATGTGAGG 59.894 60.000 0.00 0.00 0.00 3.86
2896 3904 0.179034 GATCCCAGGTCATGTGAGGC 60.179 60.000 0.00 0.00 0.00 4.70
2897 3905 0.622738 ATCCCAGGTCATGTGAGGCT 60.623 55.000 0.00 0.00 0.00 4.58
2898 3906 0.842030 TCCCAGGTCATGTGAGGCTT 60.842 55.000 0.00 0.00 0.00 4.35
2899 3907 0.679002 CCCAGGTCATGTGAGGCTTG 60.679 60.000 0.00 0.00 0.00 4.01
2900 3908 1.310933 CCAGGTCATGTGAGGCTTGC 61.311 60.000 0.00 0.00 0.00 4.01
2901 3909 1.001641 AGGTCATGTGAGGCTTGCC 60.002 57.895 2.97 2.97 0.00 4.52
2902 3910 2.048603 GGTCATGTGAGGCTTGCCC 61.049 63.158 8.17 0.79 0.00 5.36
2903 3911 1.303561 GTCATGTGAGGCTTGCCCA 60.304 57.895 8.17 3.51 35.39 5.36
2904 3912 1.303561 TCATGTGAGGCTTGCCCAC 60.304 57.895 19.30 19.30 35.39 4.61
2905 3913 2.360350 ATGTGAGGCTTGCCCACG 60.360 61.111 20.11 0.00 35.39 4.94
2913 3921 2.044451 CTTGCCCACGCCCCAATA 60.044 61.111 0.00 0.00 0.00 1.90
2914 3922 1.680651 CTTGCCCACGCCCCAATAA 60.681 57.895 0.00 0.00 0.00 1.40
2915 3923 1.944234 CTTGCCCACGCCCCAATAAC 61.944 60.000 0.00 0.00 0.00 1.89
2916 3924 3.144871 GCCCACGCCCCAATAACC 61.145 66.667 0.00 0.00 0.00 2.85
2917 3925 2.357056 CCCACGCCCCAATAACCA 59.643 61.111 0.00 0.00 0.00 3.67
2918 3926 1.304547 CCCACGCCCCAATAACCAA 60.305 57.895 0.00 0.00 0.00 3.67
2919 3927 0.686112 CCCACGCCCCAATAACCAAT 60.686 55.000 0.00 0.00 0.00 3.16
2920 3928 1.190643 CCACGCCCCAATAACCAATT 58.809 50.000 0.00 0.00 0.00 2.32
2921 3929 1.136110 CCACGCCCCAATAACCAATTC 59.864 52.381 0.00 0.00 0.00 2.17
2922 3930 1.821753 CACGCCCCAATAACCAATTCA 59.178 47.619 0.00 0.00 0.00 2.57
2923 3931 2.099405 ACGCCCCAATAACCAATTCAG 58.901 47.619 0.00 0.00 0.00 3.02
2924 3932 1.202405 CGCCCCAATAACCAATTCAGC 60.202 52.381 0.00 0.00 0.00 4.26
2925 3933 2.110578 GCCCCAATAACCAATTCAGCT 58.889 47.619 0.00 0.00 0.00 4.24
2926 3934 2.159057 GCCCCAATAACCAATTCAGCTG 60.159 50.000 7.63 7.63 0.00 4.24
2927 3935 3.099141 CCCCAATAACCAATTCAGCTGT 58.901 45.455 14.67 0.00 0.00 4.40
2928 3936 4.277476 CCCCAATAACCAATTCAGCTGTA 58.723 43.478 14.67 4.08 0.00 2.74
2929 3937 4.709397 CCCCAATAACCAATTCAGCTGTAA 59.291 41.667 14.67 7.32 0.00 2.41
2930 3938 5.394115 CCCCAATAACCAATTCAGCTGTAAC 60.394 44.000 14.67 0.00 0.00 2.50
2931 3939 5.184864 CCCAATAACCAATTCAGCTGTAACA 59.815 40.000 14.67 0.00 0.00 2.41
2932 3940 6.092748 CCAATAACCAATTCAGCTGTAACAC 58.907 40.000 14.67 0.00 0.00 3.32
2933 3941 6.071952 CCAATAACCAATTCAGCTGTAACACT 60.072 38.462 14.67 0.00 0.00 3.55
2934 3942 7.370383 CAATAACCAATTCAGCTGTAACACTT 58.630 34.615 14.67 2.93 0.00 3.16
2935 3943 5.852282 AACCAATTCAGCTGTAACACTTT 57.148 34.783 14.67 0.00 0.00 2.66
2936 3944 5.186996 ACCAATTCAGCTGTAACACTTTG 57.813 39.130 14.67 5.20 0.00 2.77
2937 3945 4.644685 ACCAATTCAGCTGTAACACTTTGT 59.355 37.500 14.67 0.00 0.00 2.83
2938 3946 5.127031 ACCAATTCAGCTGTAACACTTTGTT 59.873 36.000 14.67 0.00 43.88 2.83
2939 3947 5.459762 CCAATTCAGCTGTAACACTTTGTTG 59.540 40.000 14.67 3.05 41.30 3.33
2940 3948 5.835113 ATTCAGCTGTAACACTTTGTTGT 57.165 34.783 14.67 0.00 41.30 3.32
2941 3949 4.875544 TCAGCTGTAACACTTTGTTGTC 57.124 40.909 14.67 0.00 41.30 3.18
2942 3950 3.625764 TCAGCTGTAACACTTTGTTGTCC 59.374 43.478 14.67 0.00 41.30 4.02
2943 3951 3.376859 CAGCTGTAACACTTTGTTGTCCA 59.623 43.478 5.25 0.00 41.30 4.02
2944 3952 3.377172 AGCTGTAACACTTTGTTGTCCAC 59.623 43.478 1.73 0.00 41.30 4.02
2945 3953 3.377172 GCTGTAACACTTTGTTGTCCACT 59.623 43.478 1.73 0.00 41.30 4.00
2946 3954 4.573201 GCTGTAACACTTTGTTGTCCACTA 59.427 41.667 1.73 0.00 41.30 2.74
2947 3955 5.503520 GCTGTAACACTTTGTTGTCCACTAC 60.504 44.000 1.73 0.00 41.30 2.73
2948 3956 5.489249 TGTAACACTTTGTTGTCCACTACA 58.511 37.500 1.73 0.00 41.30 2.74
2949 3957 6.116806 TGTAACACTTTGTTGTCCACTACAT 58.883 36.000 1.73 0.00 41.30 2.29
2950 3958 7.273712 TGTAACACTTTGTTGTCCACTACATA 58.726 34.615 1.73 0.00 41.30 2.29
2951 3959 7.934665 TGTAACACTTTGTTGTCCACTACATAT 59.065 33.333 1.73 0.00 41.30 1.78
2952 3960 9.426837 GTAACACTTTGTTGTCCACTACATATA 57.573 33.333 1.73 0.00 41.30 0.86
2953 3961 8.911918 AACACTTTGTTGTCCACTACATATAA 57.088 30.769 0.00 0.00 39.45 0.98
2954 3962 8.911918 ACACTTTGTTGTCCACTACATATAAA 57.088 30.769 0.00 0.00 38.10 1.40
2955 3963 9.344772 ACACTTTGTTGTCCACTACATATAAAA 57.655 29.630 0.00 0.00 38.10 1.52
2999 4007 8.688747 AAAAACATAAAATGATTTTCCCAGCA 57.311 26.923 6.40 0.00 39.93 4.41
3000 4008 7.910441 AAACATAAAATGATTTTCCCAGCAG 57.090 32.000 6.40 0.00 34.19 4.24
3001 4009 6.855763 ACATAAAATGATTTTCCCAGCAGA 57.144 33.333 6.40 0.00 34.19 4.26
3002 4010 6.870769 ACATAAAATGATTTTCCCAGCAGAG 58.129 36.000 6.40 0.00 34.19 3.35
3003 4011 6.438425 ACATAAAATGATTTTCCCAGCAGAGT 59.562 34.615 6.40 0.00 34.19 3.24
3004 4012 4.796038 AAATGATTTTCCCAGCAGAGTG 57.204 40.909 0.00 0.00 0.00 3.51
3005 4013 1.538047 TGATTTTCCCAGCAGAGTGC 58.462 50.000 0.00 0.00 45.46 4.40
3006 4014 0.813821 GATTTTCCCAGCAGAGTGCC 59.186 55.000 0.00 0.00 46.52 5.01
3007 4015 0.112995 ATTTTCCCAGCAGAGTGCCA 59.887 50.000 0.00 0.00 46.52 4.92
3008 4016 0.106268 TTTTCCCAGCAGAGTGCCAA 60.106 50.000 0.00 0.00 46.52 4.52
3009 4017 0.538057 TTTCCCAGCAGAGTGCCAAG 60.538 55.000 0.00 0.00 46.52 3.61
3010 4018 1.708993 TTCCCAGCAGAGTGCCAAGT 61.709 55.000 0.00 0.00 46.52 3.16
3011 4019 0.835971 TCCCAGCAGAGTGCCAAGTA 60.836 55.000 0.00 0.00 46.52 2.24
3012 4020 0.036732 CCCAGCAGAGTGCCAAGTAA 59.963 55.000 0.00 0.00 46.52 2.24
3013 4021 1.545428 CCCAGCAGAGTGCCAAGTAAA 60.545 52.381 0.00 0.00 46.52 2.01
3014 4022 2.229792 CCAGCAGAGTGCCAAGTAAAA 58.770 47.619 0.00 0.00 46.52 1.52
3015 4023 2.227388 CCAGCAGAGTGCCAAGTAAAAG 59.773 50.000 0.00 0.00 46.52 2.27
3016 4024 2.880890 CAGCAGAGTGCCAAGTAAAAGT 59.119 45.455 0.00 0.00 46.52 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 4.932200 CCTCCATTACTCTTCACACTTGTC 59.068 45.833 0.00 0.00 0.00 3.18
13 14 4.804261 GCCTCCATTACTCTTCACACTTGT 60.804 45.833 0.00 0.00 0.00 3.16
48 49 9.261180 GCTTCTTGTATAGTACTGCAATCATTA 57.739 33.333 5.39 0.00 0.00 1.90
49 50 7.770433 TGCTTCTTGTATAGTACTGCAATCATT 59.230 33.333 5.39 0.00 0.00 2.57
50 51 7.225538 GTGCTTCTTGTATAGTACTGCAATCAT 59.774 37.037 5.39 0.00 0.00 2.45
52 53 6.535150 TGTGCTTCTTGTATAGTACTGCAATC 59.465 38.462 5.39 0.00 0.00 2.67
53 54 6.406370 TGTGCTTCTTGTATAGTACTGCAAT 58.594 36.000 5.39 0.00 0.00 3.56
55 56 5.400066 TGTGCTTCTTGTATAGTACTGCA 57.600 39.130 5.39 0.00 0.00 4.41
56 57 6.313905 ACAATGTGCTTCTTGTATAGTACTGC 59.686 38.462 5.39 0.00 33.96 4.40
57 58 7.834068 ACAATGTGCTTCTTGTATAGTACTG 57.166 36.000 5.39 0.00 33.96 2.74
59 60 7.962918 CCAAACAATGTGCTTCTTGTATAGTAC 59.037 37.037 0.00 0.00 34.61 2.73
73 79 5.105752 TGTCTTTTACACCAAACAATGTGC 58.894 37.500 0.00 0.00 35.90 4.57
132 138 2.971660 TCGAAGAGTGTCACCAAACA 57.028 45.000 0.00 0.00 0.00 2.83
150 156 0.456312 CAACTCGCCACTCGGTACTC 60.456 60.000 0.00 0.00 39.05 2.59
163 169 1.978782 GATTTTTCGCCTTGCAACTCG 59.021 47.619 0.00 1.77 0.00 4.18
185 191 7.284034 CAGATACATCCAACAAAGATTAGGCTT 59.716 37.037 0.00 0.00 0.00 4.35
248 257 3.510388 TCTACAACAATCTCCGAGCAG 57.490 47.619 0.00 0.00 0.00 4.24
278 287 7.177392 GGAGACTACCCGGCTTATATACTAAAA 59.823 40.741 0.00 0.00 0.00 1.52
282 291 4.291777 AGGAGACTACCCGGCTTATATACT 59.708 45.833 0.00 0.00 40.61 2.12
300 312 6.231211 GTCCAAAGACACAATAGAAAGGAGA 58.769 40.000 0.00 0.00 42.99 3.71
316 328 5.617528 TTTATGTATAGCCGGTCCAAAGA 57.382 39.130 1.90 0.00 0.00 2.52
358 371 2.739913 TGGCCAAGAAAATCGACTTACG 59.260 45.455 0.61 0.00 44.09 3.18
369 382 9.034800 ACAAATCTTAATCTAATGGCCAAGAAA 57.965 29.630 10.96 0.09 0.00 2.52
374 387 8.055181 AGAAGACAAATCTTAATCTAATGGCCA 58.945 33.333 8.56 8.56 45.60 5.36
392 405 4.137543 GGAAAGCTGGAGAAAGAAGACAA 58.862 43.478 0.00 0.00 0.00 3.18
407 435 2.094649 CGGTTAGACGAGAAGGAAAGCT 60.095 50.000 0.00 0.00 35.47 3.74
408 436 2.260481 CGGTTAGACGAGAAGGAAAGC 58.740 52.381 0.00 0.00 35.47 3.51
410 438 1.891150 AGCGGTTAGACGAGAAGGAAA 59.109 47.619 0.00 0.00 35.47 3.13
414 442 1.064357 GAGGAGCGGTTAGACGAGAAG 59.936 57.143 0.00 0.00 35.47 2.85
416 444 0.747283 GGAGGAGCGGTTAGACGAGA 60.747 60.000 0.00 0.00 35.47 4.04
420 448 1.393487 GGGAGGAGGAGCGGTTAGAC 61.393 65.000 0.00 0.00 0.00 2.59
423 451 0.559205 TATGGGAGGAGGAGCGGTTA 59.441 55.000 0.00 0.00 0.00 2.85
429 457 3.643792 AGTCGATTTTATGGGAGGAGGAG 59.356 47.826 0.00 0.00 0.00 3.69
436 464 7.397892 TTTTGCATAAGTCGATTTTATGGGA 57.602 32.000 23.04 10.68 38.40 4.37
456 484 8.602328 TGTAAGTTGACTGAATTTGCAATTTTG 58.398 29.630 0.00 3.53 0.00 2.44
457 485 8.715191 TGTAAGTTGACTGAATTTGCAATTTT 57.285 26.923 0.00 0.00 0.00 1.82
474 502 6.817184 AGGCACAGTACCTATATGTAAGTTG 58.183 40.000 0.00 0.00 35.10 3.16
488 516 5.468746 TCACATGTTTAGAAAGGCACAGTAC 59.531 40.000 0.00 0.00 0.00 2.73
491 519 5.239306 TCTTCACATGTTTAGAAAGGCACAG 59.761 40.000 0.00 0.00 0.00 3.66
551 579 9.726438 AAGCAATGTGTTTCTTATAGAGTACTT 57.274 29.630 0.00 0.00 0.00 2.24
552 580 9.155975 CAAGCAATGTGTTTCTTATAGAGTACT 57.844 33.333 0.00 0.00 0.00 2.73
591 707 4.112634 AGAGTTTTGGGCAAATCCACTA 57.887 40.909 0.00 0.00 36.38 2.74
593 709 3.572255 TGTAGAGTTTTGGGCAAATCCAC 59.428 43.478 0.00 0.00 36.38 4.02
601 717 6.072452 GGCTGATTATATGTAGAGTTTTGGGC 60.072 42.308 0.00 0.00 0.00 5.36
602 718 6.431234 GGGCTGATTATATGTAGAGTTTTGGG 59.569 42.308 0.00 0.00 0.00 4.12
603 719 6.147821 CGGGCTGATTATATGTAGAGTTTTGG 59.852 42.308 0.00 0.00 0.00 3.28
604 720 6.706270 ACGGGCTGATTATATGTAGAGTTTTG 59.294 38.462 0.00 0.00 0.00 2.44
628 781 4.549458 TGTCGTGTACAGCCTTAAGTTAC 58.451 43.478 0.00 0.00 33.01 2.50
632 785 3.585862 ACATGTCGTGTACAGCCTTAAG 58.414 45.455 0.00 0.00 42.70 1.85
633 786 3.671008 ACATGTCGTGTACAGCCTTAA 57.329 42.857 0.00 0.00 42.70 1.85
690 843 4.467769 CTTGATCCTTATGCTGGGTGAAT 58.532 43.478 0.00 0.00 0.00 2.57
696 849 1.952296 GTGCCTTGATCCTTATGCTGG 59.048 52.381 0.00 0.00 0.00 4.85
707 860 1.767681 GGATCCAGAGAGTGCCTTGAT 59.232 52.381 6.95 0.00 0.00 2.57
708 861 1.198713 GGATCCAGAGAGTGCCTTGA 58.801 55.000 6.95 0.00 0.00 3.02
709 862 0.179936 GGGATCCAGAGAGTGCCTTG 59.820 60.000 15.23 0.00 0.00 3.61
710 863 0.252881 TGGGATCCAGAGAGTGCCTT 60.253 55.000 15.23 0.00 0.00 4.35
711 864 0.252881 TTGGGATCCAGAGAGTGCCT 60.253 55.000 15.23 0.00 33.81 4.75
712 865 0.620556 TTTGGGATCCAGAGAGTGCC 59.379 55.000 15.23 0.00 33.81 5.01
713 866 2.725221 ATTTGGGATCCAGAGAGTGC 57.275 50.000 15.23 0.00 33.81 4.40
722 875 4.141665 TGCATGATTGGAAATTTGGGATCC 60.142 41.667 1.92 1.92 0.00 3.36
743 896 3.589988 AGTGTTAGTAGATGTGTGCTGC 58.410 45.455 0.00 0.00 0.00 5.25
756 909 5.424757 TGTGCTGTACTCAAAAGTGTTAGT 58.575 37.500 0.00 0.00 36.92 2.24
757 910 5.753438 TCTGTGCTGTACTCAAAAGTGTTAG 59.247 40.000 0.00 0.00 36.92 2.34
758 911 5.666462 TCTGTGCTGTACTCAAAAGTGTTA 58.334 37.500 0.00 0.00 36.92 2.41
759 912 4.513442 TCTGTGCTGTACTCAAAAGTGTT 58.487 39.130 0.00 0.00 36.92 3.32
872 1037 0.796312 GATGTGTTGGTGTAGTGGCG 59.204 55.000 0.00 0.00 0.00 5.69
873 1038 1.890876 TGATGTGTTGGTGTAGTGGC 58.109 50.000 0.00 0.00 0.00 5.01
874 1039 3.210227 TGTTGATGTGTTGGTGTAGTGG 58.790 45.455 0.00 0.00 0.00 4.00
875 1040 4.756642 AGATGTTGATGTGTTGGTGTAGTG 59.243 41.667 0.00 0.00 0.00 2.74
952 1117 7.120873 CCTTGATTTGAGTCTTGTGATGATCTT 59.879 37.037 0.00 0.00 0.00 2.40
959 1124 5.436175 TGTTCCTTGATTTGAGTCTTGTGA 58.564 37.500 0.00 0.00 0.00 3.58
960 1125 5.756195 TGTTCCTTGATTTGAGTCTTGTG 57.244 39.130 0.00 0.00 0.00 3.33
962 1127 6.564709 TGATGTTCCTTGATTTGAGTCTTG 57.435 37.500 0.00 0.00 0.00 3.02
963 1128 7.600065 CAATGATGTTCCTTGATTTGAGTCTT 58.400 34.615 0.00 0.00 0.00 3.01
964 1129 6.349944 GCAATGATGTTCCTTGATTTGAGTCT 60.350 38.462 0.00 0.00 0.00 3.24
965 1130 5.803967 GCAATGATGTTCCTTGATTTGAGTC 59.196 40.000 0.00 0.00 0.00 3.36
966 1131 5.244402 TGCAATGATGTTCCTTGATTTGAGT 59.756 36.000 0.00 0.00 0.00 3.41
967 1132 5.716094 TGCAATGATGTTCCTTGATTTGAG 58.284 37.500 0.00 0.00 0.00 3.02
968 1133 5.725325 TGCAATGATGTTCCTTGATTTGA 57.275 34.783 0.00 0.00 0.00 2.69
969 1134 6.978343 ATTGCAATGATGTTCCTTGATTTG 57.022 33.333 12.09 0.00 0.00 2.32
970 1135 7.118680 GTGAATTGCAATGATGTTCCTTGATTT 59.881 33.333 13.82 0.00 0.00 2.17
971 1136 6.592607 GTGAATTGCAATGATGTTCCTTGATT 59.407 34.615 13.82 0.00 0.00 2.57
972 1137 6.103997 GTGAATTGCAATGATGTTCCTTGAT 58.896 36.000 13.82 0.00 0.00 2.57
973 1138 5.010820 TGTGAATTGCAATGATGTTCCTTGA 59.989 36.000 13.82 0.00 0.00 3.02
974 1139 5.231702 TGTGAATTGCAATGATGTTCCTTG 58.768 37.500 13.82 0.00 0.00 3.61
975 1140 5.471556 TGTGAATTGCAATGATGTTCCTT 57.528 34.783 13.82 0.00 0.00 3.36
976 1141 5.221481 TGTTGTGAATTGCAATGATGTTCCT 60.221 36.000 13.82 0.00 0.00 3.36
977 1142 4.989797 TGTTGTGAATTGCAATGATGTTCC 59.010 37.500 13.82 2.56 0.00 3.62
978 1143 6.366604 TCATGTTGTGAATTGCAATGATGTTC 59.633 34.615 13.82 7.74 32.78 3.18
979 1144 6.224584 TCATGTTGTGAATTGCAATGATGTT 58.775 32.000 13.82 0.00 32.78 2.71
980 1145 5.785243 TCATGTTGTGAATTGCAATGATGT 58.215 33.333 13.82 0.00 32.78 3.06
981 1146 6.588373 TCTTCATGTTGTGAATTGCAATGATG 59.412 34.615 13.82 6.58 45.36 3.07
982 1147 6.693466 TCTTCATGTTGTGAATTGCAATGAT 58.307 32.000 13.82 0.00 45.36 2.45
983 1148 6.086785 TCTTCATGTTGTGAATTGCAATGA 57.913 33.333 13.82 0.66 45.36 2.57
984 1149 6.617741 GCTTCTTCATGTTGTGAATTGCAATG 60.618 38.462 13.82 0.00 45.36 2.82
985 1150 5.407387 GCTTCTTCATGTTGTGAATTGCAAT 59.593 36.000 5.99 5.99 45.36 3.56
986 1151 4.746115 GCTTCTTCATGTTGTGAATTGCAA 59.254 37.500 0.00 0.00 45.36 4.08
987 1152 4.300803 GCTTCTTCATGTTGTGAATTGCA 58.699 39.130 0.00 0.00 45.36 4.08
988 1153 3.676646 GGCTTCTTCATGTTGTGAATTGC 59.323 43.478 0.00 0.00 45.36 3.56
989 1154 4.873817 TGGCTTCTTCATGTTGTGAATTG 58.126 39.130 0.00 0.00 45.36 2.32
990 1155 5.620654 CGATGGCTTCTTCATGTTGTGAATT 60.621 40.000 0.00 0.00 45.36 2.17
991 1156 4.142534 CGATGGCTTCTTCATGTTGTGAAT 60.143 41.667 0.00 0.00 45.36 2.57
992 1157 3.189080 CGATGGCTTCTTCATGTTGTGAA 59.811 43.478 0.00 0.00 44.36 3.18
993 1158 2.743664 CGATGGCTTCTTCATGTTGTGA 59.256 45.455 0.00 0.00 34.25 3.58
994 1159 2.743664 TCGATGGCTTCTTCATGTTGTG 59.256 45.455 0.00 0.00 0.00 3.33
995 1160 2.744202 GTCGATGGCTTCTTCATGTTGT 59.256 45.455 0.00 0.00 0.00 3.32
996 1161 2.222886 CGTCGATGGCTTCTTCATGTTG 60.223 50.000 0.00 0.00 0.00 3.33
997 1162 2.002586 CGTCGATGGCTTCTTCATGTT 58.997 47.619 0.00 0.00 0.00 2.71
998 1163 1.645034 CGTCGATGGCTTCTTCATGT 58.355 50.000 0.00 0.00 0.00 3.21
999 1164 0.302890 GCGTCGATGGCTTCTTCATG 59.697 55.000 6.79 0.00 0.00 3.07
1328 1493 3.144120 CTGATCAGGTCGAGGCGGG 62.144 68.421 15.38 0.00 0.00 6.13
1899 2064 0.389166 CCTCGAGCACAGACACCTTC 60.389 60.000 6.99 0.00 0.00 3.46
1924 2089 2.659897 CCTATGCAGCTCGCCGAC 60.660 66.667 0.00 0.00 41.33 4.79
2029 2194 3.559655 TCGTTTCTGTGGTTGTTCATCAG 59.440 43.478 0.00 0.00 0.00 2.90
2031 2196 4.213270 TGATCGTTTCTGTGGTTGTTCATC 59.787 41.667 0.00 0.00 0.00 2.92
2040 2205 5.050769 CGGATTTCTATGATCGTTTCTGTGG 60.051 44.000 0.00 0.00 0.00 4.17
2106 2276 6.064060 AGAGTTTGGACACAGAATTGATTGA 58.936 36.000 0.00 0.00 0.00 2.57
2107 2277 6.323203 AGAGTTTGGACACAGAATTGATTG 57.677 37.500 0.00 0.00 0.00 2.67
2108 2278 6.742109 CAAGAGTTTGGACACAGAATTGATT 58.258 36.000 0.00 0.00 0.00 2.57
2109 2279 6.323203 CAAGAGTTTGGACACAGAATTGAT 57.677 37.500 0.00 0.00 0.00 2.57
2164 2334 2.026262 GGCCATCCTTTCAAGTGGTAGA 60.026 50.000 0.00 0.00 34.23 2.59
2192 2362 6.602009 GGCCCTAAGTTCTACAACACATTATT 59.398 38.462 0.00 0.00 34.60 1.40
2196 2366 3.587506 AGGCCCTAAGTTCTACAACACAT 59.412 43.478 0.00 0.00 34.60 3.21
2197 2367 2.976882 AGGCCCTAAGTTCTACAACACA 59.023 45.455 0.00 0.00 34.60 3.72
2198 2368 3.697619 AGGCCCTAAGTTCTACAACAC 57.302 47.619 0.00 0.00 34.60 3.32
2199 2369 4.717279 AAAGGCCCTAAGTTCTACAACA 57.283 40.909 0.00 0.00 34.60 3.33
2200 2370 5.533528 TGAAAAAGGCCCTAAGTTCTACAAC 59.466 40.000 0.00 0.00 0.00 3.32
2209 2423 6.993786 TTTTTGTTTGAAAAAGGCCCTAAG 57.006 33.333 0.00 0.00 31.05 2.18
2232 2446 9.425248 TCTATGAATCAGAAAGGCCATAAATTT 57.575 29.630 5.01 0.00 0.00 1.82
2233 2447 9.425248 TTCTATGAATCAGAAAGGCCATAAATT 57.575 29.630 5.01 0.00 0.00 1.82
2234 2448 9.597681 ATTCTATGAATCAGAAAGGCCATAAAT 57.402 29.630 5.01 0.00 35.73 1.40
2235 2449 9.425248 AATTCTATGAATCAGAAAGGCCATAAA 57.575 29.630 5.01 0.00 35.73 1.40
2236 2450 9.071276 GAATTCTATGAATCAGAAAGGCCATAA 57.929 33.333 5.01 0.00 35.73 1.90
2237 2451 8.443176 AGAATTCTATGAATCAGAAAGGCCATA 58.557 33.333 6.06 0.00 35.73 2.74
2238 2452 7.296098 AGAATTCTATGAATCAGAAAGGCCAT 58.704 34.615 6.06 0.00 35.73 4.40
2239 2453 6.666678 AGAATTCTATGAATCAGAAAGGCCA 58.333 36.000 6.06 0.00 35.73 5.36
2240 2454 6.769822 TGAGAATTCTATGAATCAGAAAGGCC 59.230 38.462 8.25 0.00 35.73 5.19
2241 2455 7.798596 TGAGAATTCTATGAATCAGAAAGGC 57.201 36.000 8.25 0.00 35.73 4.35
2245 2459 8.177663 GCGTTTTGAGAATTCTATGAATCAGAA 58.822 33.333 8.25 0.24 36.50 3.02
2246 2460 7.334171 TGCGTTTTGAGAATTCTATGAATCAGA 59.666 33.333 8.25 0.00 0.00 3.27
2247 2461 7.466805 TGCGTTTTGAGAATTCTATGAATCAG 58.533 34.615 8.25 0.00 0.00 2.90
2248 2462 7.376435 TGCGTTTTGAGAATTCTATGAATCA 57.624 32.000 8.25 0.00 0.00 2.57
2249 2463 6.413235 GCTGCGTTTTGAGAATTCTATGAATC 59.587 38.462 8.25 0.00 0.00 2.52
2254 2468 5.627499 TTGCTGCGTTTTGAGAATTCTAT 57.373 34.783 8.25 0.00 0.00 1.98
2262 2476 3.829886 TTCCTATTGCTGCGTTTTGAG 57.170 42.857 0.00 0.00 0.00 3.02
2269 2483 6.304356 TCTCATATTTTTCCTATTGCTGCG 57.696 37.500 0.00 0.00 0.00 5.18
2271 2485 7.020010 GCGATCTCATATTTTTCCTATTGCTG 58.980 38.462 0.00 0.00 0.00 4.41
2272 2486 6.712095 TGCGATCTCATATTTTTCCTATTGCT 59.288 34.615 0.00 0.00 0.00 3.91
2280 2494 4.035558 TGCCACTGCGATCTCATATTTTTC 59.964 41.667 0.00 0.00 41.78 2.29
2285 2499 2.696506 CATGCCACTGCGATCTCATAT 58.303 47.619 0.00 0.00 41.78 1.78
2286 2500 1.875157 GCATGCCACTGCGATCTCATA 60.875 52.381 6.36 0.00 41.78 2.15
2287 2501 1.164662 GCATGCCACTGCGATCTCAT 61.165 55.000 6.36 0.00 41.78 2.90
2288 2502 1.816679 GCATGCCACTGCGATCTCA 60.817 57.895 6.36 0.00 41.78 3.27
2289 2503 1.497223 GAGCATGCCACTGCGATCTC 61.497 60.000 15.66 0.00 46.86 2.75
2290 2504 1.523258 GAGCATGCCACTGCGATCT 60.523 57.895 15.66 0.00 46.86 2.75
2291 2505 1.164662 ATGAGCATGCCACTGCGATC 61.165 55.000 15.66 2.97 46.86 3.69
2292 2506 0.750546 AATGAGCATGCCACTGCGAT 60.751 50.000 15.66 0.00 46.86 4.58
2294 2508 0.734309 TAAATGAGCATGCCACTGCG 59.266 50.000 15.66 0.00 46.86 5.18
2295 2509 2.945447 TTAAATGAGCATGCCACTGC 57.055 45.000 15.66 0.00 42.62 4.40
2296 2510 5.657474 AGAATTTAAATGAGCATGCCACTG 58.343 37.500 15.66 0.00 0.00 3.66
2298 2512 7.170320 CCAATAGAATTTAAATGAGCATGCCAC 59.830 37.037 15.66 9.87 0.00 5.01
2299 2513 7.069702 TCCAATAGAATTTAAATGAGCATGCCA 59.930 33.333 15.66 12.73 0.00 4.92
2300 2514 7.436118 TCCAATAGAATTTAAATGAGCATGCC 58.564 34.615 15.66 6.65 0.00 4.40
2301 2515 9.485206 AATCCAATAGAATTTAAATGAGCATGC 57.515 29.630 10.51 10.51 0.00 4.06
2317 2531 7.414429 CGATCAAACAAGCAAGAATCCAATAGA 60.414 37.037 0.00 0.00 0.00 1.98
2328 2542 4.326205 CGTGATACGATCAAACAAGCAAG 58.674 43.478 0.00 0.00 46.05 4.01
2332 2546 5.524511 TTTCCGTGATACGATCAAACAAG 57.475 39.130 2.52 0.00 46.05 3.16
2357 2572 7.944554 TCAAATCTCTTGGAAGGAATACTTTGT 59.055 33.333 0.00 0.00 40.21 2.83
2363 2578 5.118990 CGCTCAAATCTCTTGGAAGGAATA 58.881 41.667 0.00 0.00 0.00 1.75
2403 2618 9.239002 CTAGAGATTCCTTTGTACTACATTTCG 57.761 37.037 0.00 0.00 0.00 3.46
2408 2623 8.660295 TTTCCTAGAGATTCCTTTGTACTACA 57.340 34.615 0.00 0.00 0.00 2.74
2437 2653 9.442047 GGATTCATAAGACTGAAACATATAGGG 57.558 37.037 0.00 0.00 38.55 3.53
2451 2669 9.888878 CATATGTTTGTCATGGATTCATAAGAC 57.111 33.333 0.00 0.00 37.91 3.01
2499 3506 7.703058 AAAGGACTTTCGTATGAATTTGGAT 57.297 32.000 0.00 0.00 33.20 3.41
2508 3515 6.034683 CCTTCGACTTAAAGGACTTTCGTATG 59.965 42.308 0.00 0.00 45.15 2.39
2509 3516 6.071728 TCCTTCGACTTAAAGGACTTTCGTAT 60.072 38.462 0.00 0.00 45.74 3.06
2512 3520 4.553323 TCCTTCGACTTAAAGGACTTTCG 58.447 43.478 0.00 0.00 45.74 3.46
2520 3528 3.003480 CAAGGGCTCCTTCGACTTAAAG 58.997 50.000 3.71 0.00 42.67 1.85
2529 3537 3.118738 TCGAATAACTCAAGGGCTCCTTC 60.119 47.826 3.71 0.00 42.67 3.46
2532 3540 2.981859 TCGAATAACTCAAGGGCTCC 57.018 50.000 0.00 0.00 0.00 4.70
2533 3541 5.622770 TTTTTCGAATAACTCAAGGGCTC 57.377 39.130 0.00 0.00 0.00 4.70
2556 3564 2.310538 CAAACTCAAGGGCTCCTTTGT 58.689 47.619 10.05 4.32 41.69 2.83
2557 3565 1.000171 GCAAACTCAAGGGCTCCTTTG 60.000 52.381 4.57 4.57 41.69 2.77
2558 3566 1.332195 GCAAACTCAAGGGCTCCTTT 58.668 50.000 3.93 0.00 41.69 3.11
2584 3592 7.436673 TCAAATGTGGTTATTAGCAACAACAAC 59.563 33.333 0.65 0.00 43.71 3.32
2588 3596 8.986847 CAAATCAAATGTGGTTATTAGCAACAA 58.013 29.630 0.00 0.00 32.77 2.83
2619 3627 4.202315 ACAGTGCATGTACCTACTTTGTCA 60.202 41.667 10.59 0.00 41.60 3.58
2620 3628 4.315803 ACAGTGCATGTACCTACTTTGTC 58.684 43.478 10.59 0.00 41.60 3.18
2621 3629 4.351874 ACAGTGCATGTACCTACTTTGT 57.648 40.909 10.59 4.47 41.60 2.83
2646 3654 9.255304 GCAAAATGGTAATGAACAGTCTAAAAA 57.745 29.630 0.00 0.00 0.00 1.94
2647 3655 7.870445 GGCAAAATGGTAATGAACAGTCTAAAA 59.130 33.333 0.00 0.00 0.00 1.52
2648 3656 7.232534 AGGCAAAATGGTAATGAACAGTCTAAA 59.767 33.333 0.00 0.00 0.00 1.85
2649 3657 6.719370 AGGCAAAATGGTAATGAACAGTCTAA 59.281 34.615 0.00 0.00 0.00 2.10
2650 3658 6.245408 AGGCAAAATGGTAATGAACAGTCTA 58.755 36.000 0.00 0.00 0.00 2.59
2651 3659 5.079643 AGGCAAAATGGTAATGAACAGTCT 58.920 37.500 0.00 0.00 0.00 3.24
2652 3660 5.391312 AGGCAAAATGGTAATGAACAGTC 57.609 39.130 0.00 0.00 0.00 3.51
2653 3661 6.909550 TTAGGCAAAATGGTAATGAACAGT 57.090 33.333 0.00 0.00 0.00 3.55
2654 3662 9.868277 TTAATTAGGCAAAATGGTAATGAACAG 57.132 29.630 0.00 0.00 0.00 3.16
2681 3689 2.710440 CCGGTTCGGTCTGGTTTTT 58.290 52.632 0.00 0.00 42.73 1.94
2682 3690 4.468007 CCGGTTCGGTCTGGTTTT 57.532 55.556 0.00 0.00 42.73 2.43
2692 3700 3.719144 GGTTTGACCGCCGGTTCG 61.719 66.667 11.54 0.00 35.25 3.95
2693 3701 2.592287 TGGTTTGACCGCCGGTTC 60.592 61.111 11.54 4.35 42.58 3.62
2694 3702 2.593436 CTGGTTTGACCGCCGGTT 60.593 61.111 11.54 0.00 42.58 4.44
2695 3703 4.636435 CCTGGTTTGACCGCCGGT 62.636 66.667 9.43 9.43 42.58 5.28
2696 3704 3.835790 TTCCTGGTTTGACCGCCGG 62.836 63.158 0.00 0.00 42.58 6.13
2697 3705 1.448922 TTTTCCTGGTTTGACCGCCG 61.449 55.000 0.00 0.00 42.58 6.46
2698 3706 0.747852 TTTTTCCTGGTTTGACCGCC 59.252 50.000 0.00 0.00 42.58 6.13
2699 3707 1.537348 GGTTTTTCCTGGTTTGACCGC 60.537 52.381 0.00 0.00 42.58 5.68
2700 3708 1.268845 CGGTTTTTCCTGGTTTGACCG 60.269 52.381 15.62 15.62 42.58 4.79
2701 3709 1.067974 CCGGTTTTTCCTGGTTTGACC 59.932 52.381 0.00 0.00 39.22 4.02
2702 3710 2.025898 TCCGGTTTTTCCTGGTTTGAC 58.974 47.619 0.00 0.00 33.68 3.18
2703 3711 2.427812 GTTCCGGTTTTTCCTGGTTTGA 59.572 45.455 0.00 0.00 33.68 2.69
2704 3712 2.482316 GGTTCCGGTTTTTCCTGGTTTG 60.482 50.000 0.00 0.00 33.68 2.93
2705 3713 1.758280 GGTTCCGGTTTTTCCTGGTTT 59.242 47.619 0.00 0.00 33.68 3.27
2706 3714 1.405872 GGTTCCGGTTTTTCCTGGTT 58.594 50.000 0.00 0.00 33.68 3.67
2707 3715 0.820482 CGGTTCCGGTTTTTCCTGGT 60.820 55.000 0.00 0.00 33.68 4.00
2708 3716 1.520600 CCGGTTCCGGTTTTTCCTGG 61.521 60.000 20.65 0.00 43.86 4.45
2709 3717 1.953772 CCGGTTCCGGTTTTTCCTG 59.046 57.895 20.65 0.00 43.86 3.86
2710 3718 4.486887 CCGGTTCCGGTTTTTCCT 57.513 55.556 20.65 0.00 43.86 3.36
2719 3727 2.246761 TATTGAGGCCACCGGTTCCG 62.247 60.000 2.97 4.08 0.00 4.30
2720 3728 0.463833 CTATTGAGGCCACCGGTTCC 60.464 60.000 2.97 9.82 0.00 3.62
2721 3729 0.252197 ACTATTGAGGCCACCGGTTC 59.748 55.000 2.97 0.00 0.00 3.62
2722 3730 0.696501 AACTATTGAGGCCACCGGTT 59.303 50.000 2.97 0.00 0.00 4.44
2723 3731 0.252197 GAACTATTGAGGCCACCGGT 59.748 55.000 5.01 0.00 0.00 5.28
2724 3732 0.541863 AGAACTATTGAGGCCACCGG 59.458 55.000 5.01 0.00 0.00 5.28
2725 3733 2.403252 AAGAACTATTGAGGCCACCG 57.597 50.000 5.01 0.00 0.00 4.94
2726 3734 4.096532 GCTTAAAGAACTATTGAGGCCACC 59.903 45.833 5.01 0.00 0.00 4.61
2727 3735 4.944317 AGCTTAAAGAACTATTGAGGCCAC 59.056 41.667 5.01 0.00 0.00 5.01
2728 3736 5.179452 AGCTTAAAGAACTATTGAGGCCA 57.821 39.130 5.01 0.00 0.00 5.36
2729 3737 7.809546 ATTAGCTTAAAGAACTATTGAGGCC 57.190 36.000 0.00 0.00 0.00 5.19
2750 3758 9.912634 CCGGTTTTCTATATAACGGTCTTATTA 57.087 33.333 0.00 0.00 0.00 0.98
2751 3759 8.424133 ACCGGTTTTCTATATAACGGTCTTATT 58.576 33.333 0.00 0.00 30.78 1.40
2752 3760 7.955918 ACCGGTTTTCTATATAACGGTCTTAT 58.044 34.615 0.00 0.00 30.78 1.73
2753 3761 7.346751 ACCGGTTTTCTATATAACGGTCTTA 57.653 36.000 0.00 0.00 30.78 2.10
2754 3762 6.225981 ACCGGTTTTCTATATAACGGTCTT 57.774 37.500 0.00 0.00 30.78 3.01
2755 3763 5.859205 ACCGGTTTTCTATATAACGGTCT 57.141 39.130 0.00 0.00 30.78 3.85
2756 3764 6.042143 TCAACCGGTTTTCTATATAACGGTC 58.958 40.000 19.55 0.00 33.36 4.79
2757 3765 5.976458 TCAACCGGTTTTCTATATAACGGT 58.024 37.500 19.55 0.00 34.78 4.83
2758 3766 6.508404 CGTTCAACCGGTTTTCTATATAACGG 60.508 42.308 19.55 1.15 33.26 4.44
2759 3767 6.405216 CGTTCAACCGGTTTTCTATATAACG 58.595 40.000 19.55 17.35 0.00 3.18
2760 3768 6.238184 CCCGTTCAACCGGTTTTCTATATAAC 60.238 42.308 19.55 10.48 46.66 1.89
2761 3769 5.816777 CCCGTTCAACCGGTTTTCTATATAA 59.183 40.000 19.55 0.00 46.66 0.98
2762 3770 5.358922 CCCGTTCAACCGGTTTTCTATATA 58.641 41.667 19.55 0.00 46.66 0.86
2763 3771 4.193865 CCCGTTCAACCGGTTTTCTATAT 58.806 43.478 19.55 0.00 46.66 0.86
2764 3772 3.598299 CCCGTTCAACCGGTTTTCTATA 58.402 45.455 19.55 0.00 46.66 1.31
2765 3773 2.429478 CCCGTTCAACCGGTTTTCTAT 58.571 47.619 19.55 0.00 46.66 1.98
2766 3774 1.881591 CCCGTTCAACCGGTTTTCTA 58.118 50.000 19.55 0.11 46.66 2.10
2767 3775 1.449726 GCCCGTTCAACCGGTTTTCT 61.450 55.000 19.55 0.00 46.66 2.52
2768 3776 1.008194 GCCCGTTCAACCGGTTTTC 60.008 57.895 19.55 9.96 46.66 2.29
2769 3777 2.491897 GGCCCGTTCAACCGGTTTT 61.492 57.895 19.55 0.00 46.66 2.43
2770 3778 2.908428 GGCCCGTTCAACCGGTTT 60.908 61.111 19.55 0.00 46.66 3.27
2775 3783 2.410638 GAAAACCGGCCCGTTCAACC 62.411 60.000 10.02 0.00 0.00 3.77
2776 3784 1.008194 GAAAACCGGCCCGTTCAAC 60.008 57.895 10.02 1.86 0.00 3.18
2777 3785 0.108207 TAGAAAACCGGCCCGTTCAA 59.892 50.000 10.02 0.00 0.00 2.69
2778 3786 0.320946 CTAGAAAACCGGCCCGTTCA 60.321 55.000 10.02 0.00 0.00 3.18
2779 3787 0.037046 TCTAGAAAACCGGCCCGTTC 60.037 55.000 10.02 0.00 0.00 3.95
2780 3788 0.397564 TTCTAGAAAACCGGCCCGTT 59.602 50.000 0.00 3.38 0.00 4.44
2781 3789 0.397564 TTTCTAGAAAACCGGCCCGT 59.602 50.000 15.57 0.00 0.00 5.28
2782 3790 1.525941 TTTTCTAGAAAACCGGCCCG 58.474 50.000 23.65 0.00 35.57 6.13
2790 3798 6.437793 TGGGTTTTCACTGGTTTTCTAGAAAA 59.562 34.615 23.65 23.65 37.90 2.29
2791 3799 5.952947 TGGGTTTTCACTGGTTTTCTAGAAA 59.047 36.000 13.99 13.99 32.56 2.52
2792 3800 5.511363 TGGGTTTTCACTGGTTTTCTAGAA 58.489 37.500 0.00 0.00 32.56 2.10
2793 3801 5.118729 TGGGTTTTCACTGGTTTTCTAGA 57.881 39.130 0.00 0.00 32.56 2.43
2794 3802 4.278419 CCTGGGTTTTCACTGGTTTTCTAG 59.722 45.833 0.00 0.00 37.51 2.43
2795 3803 4.211920 CCTGGGTTTTCACTGGTTTTCTA 58.788 43.478 0.00 0.00 37.51 2.10
2796 3804 3.031013 CCTGGGTTTTCACTGGTTTTCT 58.969 45.455 0.00 0.00 37.51 2.52
2797 3805 2.483013 GCCTGGGTTTTCACTGGTTTTC 60.483 50.000 0.00 0.00 43.13 2.29
2798 3806 1.484653 GCCTGGGTTTTCACTGGTTTT 59.515 47.619 0.00 0.00 43.13 2.43
2799 3807 1.119684 GCCTGGGTTTTCACTGGTTT 58.880 50.000 0.00 0.00 43.13 3.27
2800 3808 0.759060 GGCCTGGGTTTTCACTGGTT 60.759 55.000 0.00 0.00 43.13 3.67
2801 3809 1.152546 GGCCTGGGTTTTCACTGGT 60.153 57.895 0.00 0.00 43.13 4.00
2802 3810 0.542702 ATGGCCTGGGTTTTCACTGG 60.543 55.000 3.32 0.00 43.89 4.00
2803 3811 1.001181 CAATGGCCTGGGTTTTCACTG 59.999 52.381 3.32 0.00 0.00 3.66
2804 3812 1.133199 TCAATGGCCTGGGTTTTCACT 60.133 47.619 3.32 0.00 0.00 3.41
2805 3813 1.337118 TCAATGGCCTGGGTTTTCAC 58.663 50.000 3.32 0.00 0.00 3.18
2806 3814 1.691434 GTTCAATGGCCTGGGTTTTCA 59.309 47.619 3.32 0.00 0.00 2.69
2807 3815 1.001974 GGTTCAATGGCCTGGGTTTTC 59.998 52.381 3.32 0.00 0.00 2.29
2808 3816 1.055849 GGTTCAATGGCCTGGGTTTT 58.944 50.000 3.32 0.00 0.00 2.43
2809 3817 1.184970 CGGTTCAATGGCCTGGGTTT 61.185 55.000 3.32 0.00 0.00 3.27
2810 3818 1.606313 CGGTTCAATGGCCTGGGTT 60.606 57.895 3.32 0.00 0.00 4.11
2811 3819 2.035626 CGGTTCAATGGCCTGGGT 59.964 61.111 3.32 0.00 0.00 4.51
2812 3820 2.755469 CCGGTTCAATGGCCTGGG 60.755 66.667 3.32 0.00 0.00 4.45
2813 3821 0.897863 TTTCCGGTTCAATGGCCTGG 60.898 55.000 3.32 0.00 0.00 4.45
2814 3822 0.965439 TTTTCCGGTTCAATGGCCTG 59.035 50.000 3.32 0.00 0.00 4.85
2815 3823 1.710816 TTTTTCCGGTTCAATGGCCT 58.289 45.000 3.32 0.00 0.00 5.19
2845 3853 9.487790 CCACTTTTGCCAATTTCTTTTAGAATA 57.512 29.630 0.00 0.00 33.67 1.75
2846 3854 8.210265 TCCACTTTTGCCAATTTCTTTTAGAAT 58.790 29.630 0.00 0.00 33.67 2.40
2847 3855 7.560368 TCCACTTTTGCCAATTTCTTTTAGAA 58.440 30.769 0.00 0.00 31.28 2.10
2848 3856 7.118496 TCCACTTTTGCCAATTTCTTTTAGA 57.882 32.000 0.00 0.00 0.00 2.10
2849 3857 7.784633 TTCCACTTTTGCCAATTTCTTTTAG 57.215 32.000 0.00 0.00 0.00 1.85
2850 3858 8.744568 AATTCCACTTTTGCCAATTTCTTTTA 57.255 26.923 0.00 0.00 0.00 1.52
2851 3859 7.467131 CGAATTCCACTTTTGCCAATTTCTTTT 60.467 33.333 0.00 0.00 0.00 2.27
2852 3860 6.018016 CGAATTCCACTTTTGCCAATTTCTTT 60.018 34.615 0.00 0.00 0.00 2.52
2853 3861 5.466393 CGAATTCCACTTTTGCCAATTTCTT 59.534 36.000 0.00 0.00 0.00 2.52
2854 3862 4.990426 CGAATTCCACTTTTGCCAATTTCT 59.010 37.500 0.00 0.00 0.00 2.52
2855 3863 4.987912 TCGAATTCCACTTTTGCCAATTTC 59.012 37.500 0.00 0.00 0.00 2.17
2856 3864 4.954875 TCGAATTCCACTTTTGCCAATTT 58.045 34.783 0.00 0.00 0.00 1.82
2857 3865 4.599047 TCGAATTCCACTTTTGCCAATT 57.401 36.364 0.00 0.00 0.00 2.32
2858 3866 4.381932 GGATCGAATTCCACTTTTGCCAAT 60.382 41.667 0.00 0.00 35.72 3.16
2859 3867 3.056891 GGATCGAATTCCACTTTTGCCAA 60.057 43.478 0.00 0.00 35.72 4.52
2860 3868 2.491693 GGATCGAATTCCACTTTTGCCA 59.508 45.455 0.00 0.00 35.72 4.92
2861 3869 2.159240 GGGATCGAATTCCACTTTTGCC 60.159 50.000 7.35 0.00 37.53 4.52
2862 3870 2.491693 TGGGATCGAATTCCACTTTTGC 59.508 45.455 7.35 0.00 37.53 3.68
2863 3871 3.129287 CCTGGGATCGAATTCCACTTTTG 59.871 47.826 7.35 0.00 37.53 2.44
2864 3872 3.245264 ACCTGGGATCGAATTCCACTTTT 60.245 43.478 7.35 0.00 37.53 2.27
2865 3873 2.308866 ACCTGGGATCGAATTCCACTTT 59.691 45.455 7.35 0.00 37.53 2.66
2866 3874 1.916181 ACCTGGGATCGAATTCCACTT 59.084 47.619 7.35 0.00 37.53 3.16
2867 3875 1.486726 GACCTGGGATCGAATTCCACT 59.513 52.381 7.35 0.00 37.53 4.00
2868 3876 1.209504 TGACCTGGGATCGAATTCCAC 59.790 52.381 7.35 0.00 37.53 4.02
2869 3877 1.578897 TGACCTGGGATCGAATTCCA 58.421 50.000 7.35 6.06 37.53 3.53
2870 3878 2.158755 ACATGACCTGGGATCGAATTCC 60.159 50.000 0.00 0.00 34.83 3.01
2871 3879 2.874701 CACATGACCTGGGATCGAATTC 59.125 50.000 0.00 0.00 0.00 2.17
2872 3880 2.505407 TCACATGACCTGGGATCGAATT 59.495 45.455 0.00 0.00 30.22 2.17
2873 3881 2.103771 CTCACATGACCTGGGATCGAAT 59.896 50.000 0.00 0.00 36.46 3.34
2874 3882 1.482182 CTCACATGACCTGGGATCGAA 59.518 52.381 0.00 0.00 36.46 3.71
2875 3883 1.114627 CTCACATGACCTGGGATCGA 58.885 55.000 0.00 0.00 36.46 3.59
2876 3884 0.105593 CCTCACATGACCTGGGATCG 59.894 60.000 0.00 0.00 36.46 3.69
2877 3885 0.179034 GCCTCACATGACCTGGGATC 60.179 60.000 0.00 0.00 36.46 3.36
2878 3886 0.622738 AGCCTCACATGACCTGGGAT 60.623 55.000 0.00 0.00 36.46 3.85
2879 3887 0.842030 AAGCCTCACATGACCTGGGA 60.842 55.000 0.00 0.00 35.46 4.37
2880 3888 0.679002 CAAGCCTCACATGACCTGGG 60.679 60.000 0.00 0.00 0.00 4.45
2881 3889 1.310933 GCAAGCCTCACATGACCTGG 61.311 60.000 0.00 0.00 0.00 4.45
2882 3890 1.310933 GGCAAGCCTCACATGACCTG 61.311 60.000 3.29 0.00 0.00 4.00
2883 3891 1.001641 GGCAAGCCTCACATGACCT 60.002 57.895 3.29 0.00 0.00 3.85
2884 3892 2.048603 GGGCAAGCCTCACATGACC 61.049 63.158 11.40 0.00 34.51 4.02
2885 3893 1.303561 TGGGCAAGCCTCACATGAC 60.304 57.895 11.40 0.00 36.10 3.06
2886 3894 1.303561 GTGGGCAAGCCTCACATGA 60.304 57.895 20.54 0.00 37.29 3.07
2887 3895 2.693762 CGTGGGCAAGCCTCACATG 61.694 63.158 23.17 11.60 37.22 3.21
2888 3896 2.360350 CGTGGGCAAGCCTCACAT 60.360 61.111 23.17 0.00 37.22 3.21
2896 3904 1.680651 TTATTGGGGCGTGGGCAAG 60.681 57.895 0.00 0.00 42.47 4.01
2897 3905 1.979693 GTTATTGGGGCGTGGGCAA 60.980 57.895 0.00 0.00 42.47 4.52
2898 3906 2.361865 GTTATTGGGGCGTGGGCA 60.362 61.111 0.00 0.00 42.47 5.36
2899 3907 3.144871 GGTTATTGGGGCGTGGGC 61.145 66.667 0.00 0.00 38.90 5.36
2900 3908 0.686112 ATTGGTTATTGGGGCGTGGG 60.686 55.000 0.00 0.00 0.00 4.61
2901 3909 1.136110 GAATTGGTTATTGGGGCGTGG 59.864 52.381 0.00 0.00 0.00 4.94
2902 3910 1.821753 TGAATTGGTTATTGGGGCGTG 59.178 47.619 0.00 0.00 0.00 5.34
2903 3911 2.099405 CTGAATTGGTTATTGGGGCGT 58.901 47.619 0.00 0.00 0.00 5.68
2904 3912 1.202405 GCTGAATTGGTTATTGGGGCG 60.202 52.381 0.00 0.00 0.00 6.13
2905 3913 2.110578 AGCTGAATTGGTTATTGGGGC 58.889 47.619 0.00 0.00 0.00 5.80
2906 3914 3.099141 ACAGCTGAATTGGTTATTGGGG 58.901 45.455 23.35 0.00 0.00 4.96
2907 3915 5.184864 TGTTACAGCTGAATTGGTTATTGGG 59.815 40.000 23.35 0.00 0.00 4.12
2908 3916 6.071952 AGTGTTACAGCTGAATTGGTTATTGG 60.072 38.462 23.35 0.00 0.00 3.16
2909 3917 6.913170 AGTGTTACAGCTGAATTGGTTATTG 58.087 36.000 23.35 0.00 0.00 1.90
2910 3918 7.524717 AAGTGTTACAGCTGAATTGGTTATT 57.475 32.000 23.35 0.00 0.00 1.40
2911 3919 7.014230 ACAAAGTGTTACAGCTGAATTGGTTAT 59.986 33.333 23.35 0.00 0.00 1.89
2912 3920 6.320164 ACAAAGTGTTACAGCTGAATTGGTTA 59.680 34.615 23.35 0.00 0.00 2.85
2913 3921 5.127031 ACAAAGTGTTACAGCTGAATTGGTT 59.873 36.000 23.35 3.99 0.00 3.67
2914 3922 4.644685 ACAAAGTGTTACAGCTGAATTGGT 59.355 37.500 23.35 3.97 0.00 3.67
2915 3923 5.186996 ACAAAGTGTTACAGCTGAATTGG 57.813 39.130 23.35 3.25 0.00 3.16
2916 3924 6.035843 ACAACAAAGTGTTACAGCTGAATTG 58.964 36.000 23.35 14.99 38.77 2.32
2917 3925 6.207691 ACAACAAAGTGTTACAGCTGAATT 57.792 33.333 23.35 0.00 38.77 2.17
2918 3926 5.221048 GGACAACAAAGTGTTACAGCTGAAT 60.221 40.000 23.35 0.27 38.77 2.57
2919 3927 4.095782 GGACAACAAAGTGTTACAGCTGAA 59.904 41.667 23.35 7.64 38.77 3.02
2920 3928 3.625764 GGACAACAAAGTGTTACAGCTGA 59.374 43.478 23.35 0.48 38.77 4.26
2921 3929 3.376859 TGGACAACAAAGTGTTACAGCTG 59.623 43.478 13.48 13.48 38.77 4.24
2922 3930 3.377172 GTGGACAACAAAGTGTTACAGCT 59.623 43.478 0.00 0.00 38.77 4.24
2923 3931 3.377172 AGTGGACAACAAAGTGTTACAGC 59.623 43.478 0.00 0.00 38.77 4.40
2924 3932 5.583061 TGTAGTGGACAACAAAGTGTTACAG 59.417 40.000 0.00 0.00 38.77 2.74
2925 3933 5.489249 TGTAGTGGACAACAAAGTGTTACA 58.511 37.500 0.00 0.00 38.77 2.41
2926 3934 6.613755 ATGTAGTGGACAACAAAGTGTTAC 57.386 37.500 0.00 0.00 42.78 2.50
2927 3935 9.999660 TTATATGTAGTGGACAACAAAGTGTTA 57.000 29.630 0.00 0.00 42.78 2.41
2928 3936 8.911918 TTATATGTAGTGGACAACAAAGTGTT 57.088 30.769 0.00 0.00 42.78 3.32
2929 3937 8.911918 TTTATATGTAGTGGACAACAAAGTGT 57.088 30.769 0.00 0.00 42.78 3.55
2974 3982 8.688747 TGCTGGGAAAATCATTTTATGTTTTT 57.311 26.923 0.00 7.72 41.99 1.94
2975 3983 8.156165 TCTGCTGGGAAAATCATTTTATGTTTT 58.844 29.630 0.00 0.00 34.58 2.43
2976 3984 7.678837 TCTGCTGGGAAAATCATTTTATGTTT 58.321 30.769 0.00 0.00 31.94 2.83
2977 3985 7.038799 ACTCTGCTGGGAAAATCATTTTATGTT 60.039 33.333 0.00 0.00 31.94 2.71
2978 3986 6.438425 ACTCTGCTGGGAAAATCATTTTATGT 59.562 34.615 0.00 0.00 31.94 2.29
2979 3987 6.755141 CACTCTGCTGGGAAAATCATTTTATG 59.245 38.462 0.00 0.00 31.94 1.90
2980 3988 6.628844 GCACTCTGCTGGGAAAATCATTTTAT 60.629 38.462 0.00 0.00 40.96 1.40
2981 3989 5.336690 GCACTCTGCTGGGAAAATCATTTTA 60.337 40.000 0.00 0.00 40.96 1.52
2982 3990 4.562143 GCACTCTGCTGGGAAAATCATTTT 60.562 41.667 0.00 0.00 40.96 1.82
2983 3991 3.056322 GCACTCTGCTGGGAAAATCATTT 60.056 43.478 0.00 0.00 40.96 2.32
2984 3992 2.494870 GCACTCTGCTGGGAAAATCATT 59.505 45.455 0.00 0.00 40.96 2.57
2985 3993 2.097825 GCACTCTGCTGGGAAAATCAT 58.902 47.619 0.00 0.00 40.96 2.45
2986 3994 1.538047 GCACTCTGCTGGGAAAATCA 58.462 50.000 0.00 0.00 40.96 2.57
2987 3995 0.813821 GGCACTCTGCTGGGAAAATC 59.186 55.000 0.00 0.00 44.28 2.17
2988 3996 0.112995 TGGCACTCTGCTGGGAAAAT 59.887 50.000 0.00 0.00 44.28 1.82
2989 3997 0.106268 TTGGCACTCTGCTGGGAAAA 60.106 50.000 0.00 0.00 44.28 2.29
2990 3998 0.538057 CTTGGCACTCTGCTGGGAAA 60.538 55.000 0.00 0.00 44.28 3.13
2991 3999 1.073722 CTTGGCACTCTGCTGGGAA 59.926 57.895 0.00 0.00 44.28 3.97
2992 4000 0.835971 TACTTGGCACTCTGCTGGGA 60.836 55.000 0.00 0.00 44.28 4.37
2993 4001 0.036732 TTACTTGGCACTCTGCTGGG 59.963 55.000 0.00 0.00 44.28 4.45
2994 4002 1.896220 TTTACTTGGCACTCTGCTGG 58.104 50.000 0.00 0.00 44.28 4.85
2995 4003 2.880890 ACTTTTACTTGGCACTCTGCTG 59.119 45.455 0.00 0.00 44.28 4.41
2996 4004 3.214696 ACTTTTACTTGGCACTCTGCT 57.785 42.857 0.00 0.00 44.28 4.24



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.