Multiple sequence alignment - TraesCS4A01G225600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G225600 chr4A 100.000 5990 0 0 1 5990 533458478 533464467 0.000000e+00 11062.0
1 TraesCS4A01G225600 chr4A 95.466 1588 66 4 1675 3262 552257817 552256236 0.000000e+00 2529.0
2 TraesCS4A01G225600 chr4A 87.954 1984 174 31 3269 5206 552256272 552254308 0.000000e+00 2279.0
3 TraesCS4A01G225600 chr4A 98.455 906 11 3 209 1113 552259157 552258254 0.000000e+00 1592.0
4 TraesCS4A01G225600 chr4A 96.822 409 6 1 1108 1516 552258217 552257816 0.000000e+00 676.0
5 TraesCS4A01G225600 chr4A 87.449 486 34 12 5502 5977 551136101 551136569 8.840000e-148 534.0
6 TraesCS4A01G225600 chr4A 99.519 208 1 0 1 208 533572105 533571898 4.380000e-101 379.0
7 TraesCS4A01G225600 chr4A 87.390 341 29 6 5641 5977 552252313 552251983 4.380000e-101 379.0
8 TraesCS4A01G225600 chr4A 99.034 207 2 0 1 207 533443278 533443484 7.330000e-99 372.0
9 TraesCS4A01G225600 chr4A 98.077 208 4 0 1 208 533571054 533570847 4.410000e-96 363.0
10 TraesCS4A01G225600 chr4A 96.618 207 7 0 1 207 173421039 173421245 1.600000e-90 344.0
11 TraesCS4A01G225600 chr4A 76.677 313 42 22 1702 1989 533459628 533459934 1.740000e-30 145.0
12 TraesCS4A01G225600 chr4A 76.677 313 42 22 1151 1457 533460179 533460466 1.740000e-30 145.0
13 TraesCS4A01G225600 chr4A 78.440 218 26 13 1151 1363 552257793 552257592 8.150000e-24 122.0
14 TraesCS4A01G225600 chr4A 75.641 312 40 25 1702 1989 552258174 552257875 8.150000e-24 122.0
15 TraesCS4A01G225600 chr4A 81.176 170 10 7 5472 5641 552252705 552252558 3.790000e-22 117.0
16 TraesCS4A01G225600 chr4A 100.000 44 0 0 3269 3312 533461703 533461746 1.380000e-11 82.4
17 TraesCS4A01G225600 chr4A 100.000 44 0 0 3226 3269 533461746 533461789 1.380000e-11 82.4
18 TraesCS4A01G225600 chr4D 94.704 1586 74 6 1690 3269 46620718 46622299 0.000000e+00 2455.0
19 TraesCS4A01G225600 chr4D 90.563 1812 123 20 3269 5052 46622256 46624047 0.000000e+00 2355.0
20 TraesCS4A01G225600 chr4D 83.499 1109 131 22 4130 5206 47327549 47326461 0.000000e+00 987.0
21 TraesCS4A01G225600 chr4D 90.318 723 33 11 423 1113 46619610 46620327 0.000000e+00 913.0
22 TraesCS4A01G225600 chr4D 87.643 526 39 9 5472 5986 47324870 47324360 6.690000e-164 588.0
23 TraesCS4A01G225600 chr4D 88.542 480 35 7 5502 5975 47332464 47331999 1.130000e-156 564.0
24 TraesCS4A01G225600 chr4D 87.077 325 22 11 1108 1428 46620362 46620670 3.440000e-92 350.0
25 TraesCS4A01G225600 chr4D 91.463 164 14 0 1513 1676 64390469 64390632 6.040000e-55 226.0
26 TraesCS4A01G225600 chr4D 88.021 192 9 7 208 387 46619426 46619615 1.310000e-51 215.0
27 TraesCS4A01G225600 chr4D 76.656 317 68 6 2561 2874 46621758 46622071 2.870000e-38 171.0
28 TraesCS4A01G225600 chr4D 85.294 170 12 4 5472 5641 46625817 46625973 4.800000e-36 163.0
29 TraesCS4A01G225600 chr4D 92.035 113 3 2 4037 4143 47329554 47329442 2.890000e-33 154.0
30 TraesCS4A01G225600 chr4D 80.180 222 22 15 1146 1363 46620729 46620932 4.840000e-31 147.0
31 TraesCS4A01G225600 chr4B 91.252 1589 121 11 1686 3269 68117943 68119518 0.000000e+00 2148.0
32 TraesCS4A01G225600 chr4B 86.821 1639 152 32 3607 5206 68119868 68121481 0.000000e+00 1772.0
33 TraesCS4A01G225600 chr4B 87.961 515 43 11 5472 5985 68957197 68956701 1.860000e-164 590.0
34 TraesCS4A01G225600 chr4B 87.225 454 36 9 5524 5975 68722788 68722355 1.160000e-136 497.0
35 TraesCS4A01G225600 chr4B 90.725 345 24 4 3269 3606 68119475 68119818 2.550000e-123 453.0
36 TraesCS4A01G225600 chr4B 86.913 298 22 12 428 711 68117243 68117537 9.690000e-83 318.0
37 TraesCS4A01G225600 chr4B 87.727 220 16 4 5776 5986 68123066 68123283 4.640000e-61 246.0
38 TraesCS4A01G225600 chr4B 89.941 169 11 3 949 1113 68117680 68117846 4.700000e-51 213.0
39 TraesCS4A01G225600 chr4B 81.553 206 11 9 208 387 68117035 68117239 1.740000e-30 145.0
40 TraesCS4A01G225600 chr4B 93.548 62 4 0 1455 1516 68117876 68117937 6.390000e-15 93.5
41 TraesCS4A01G225600 chr4B 89.552 67 3 1 5405 5471 68124255 68124317 1.380000e-11 82.4
42 TraesCS4A01G225600 chr4B 89.552 67 3 1 5405 5471 68955823 68955761 1.380000e-11 82.4
43 TraesCS4A01G225600 chr2A 99.038 208 2 0 1 208 29808535 29808328 2.040000e-99 374.0
44 TraesCS4A01G225600 chr2A 89.535 172 18 0 1505 1676 78849792 78849621 1.010000e-52 219.0
45 TraesCS4A01G225600 chr2A 81.707 164 28 2 1515 1676 170932283 170932120 1.050000e-27 135.0
46 TraesCS4A01G225600 chr2A 79.191 173 31 4 1492 1661 79357473 79357643 1.360000e-21 115.0
47 TraesCS4A01G225600 chr1A 99.034 207 2 0 1 207 273461383 273461589 7.330000e-99 372.0
48 TraesCS4A01G225600 chr1A 97.573 206 5 0 1 206 303733313 303733518 2.660000e-93 353.0
49 TraesCS4A01G225600 chr1A 82.857 385 46 12 2743 3126 303852731 303853096 1.610000e-85 327.0
50 TraesCS4A01G225600 chr1A 93.103 87 2 4 3419 3504 303853347 303853430 2.270000e-24 124.0
51 TraesCS4A01G225600 chr2B 98.068 207 4 0 1 207 172226172 172225966 1.590000e-95 361.0
52 TraesCS4A01G225600 chr2B 84.659 176 23 3 1503 1676 519180834 519180661 7.980000e-39 172.0
53 TraesCS4A01G225600 chr2B 77.083 192 34 9 1490 1676 692164494 692164308 1.060000e-17 102.0
54 TraesCS4A01G225600 chr1D 87.108 287 36 1 2841 3127 239805433 239805718 2.080000e-84 324.0
55 TraesCS4A01G225600 chr1D 91.515 165 12 2 1513 1676 219479942 219479779 6.040000e-55 226.0
56 TraesCS4A01G225600 chr3A 93.659 205 13 0 1 205 572142887 572143091 2.100000e-79 307.0
57 TraesCS4A01G225600 chr1B 86.574 216 23 3 2850 3064 334241154 334241364 3.610000e-57 233.0
58 TraesCS4A01G225600 chr1B 91.071 168 15 0 1512 1679 652464931 652464764 1.680000e-55 228.0
59 TraesCS4A01G225600 chr1B 91.463 164 14 0 1513 1676 649336957 649337120 6.040000e-55 226.0
60 TraesCS4A01G225600 chr5B 91.667 168 12 2 1515 1681 407219393 407219559 1.300000e-56 231.0
61 TraesCS4A01G225600 chr5B 89.941 169 16 1 1512 1680 59907033 59906866 3.640000e-52 217.0
62 TraesCS4A01G225600 chr6D 87.310 197 21 4 1497 1691 467802451 467802257 7.810000e-54 222.0
63 TraesCS4A01G225600 chr2D 89.595 173 17 1 1512 1683 169037566 169037738 1.010000e-52 219.0
64 TraesCS4A01G225600 chr7A 84.146 82 10 3 1495 1574 487482202 487482282 6.440000e-10 76.8
65 TraesCS4A01G225600 chr7B 75.130 193 31 15 1494 1676 463235409 463235224 2.320000e-09 75.0
66 TraesCS4A01G225600 chr3B 74.847 163 39 2 1515 1676 50653696 50653535 8.330000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G225600 chr4A 533458478 533464467 5989 False 11062.000000 11062 100.000000 1 5990 1 chr4A.!!$F3 5989
1 TraesCS4A01G225600 chr4A 552251983 552259157 7174 True 977.000000 2529 87.668000 209 5977 8 chr4A.!!$R2 5768
2 TraesCS4A01G225600 chr4A 533570847 533572105 1258 True 371.000000 379 98.798000 1 208 2 chr4A.!!$R1 207
3 TraesCS4A01G225600 chr4D 46619426 46625973 6547 False 846.125000 2455 86.601625 208 5641 8 chr4D.!!$F2 5433
4 TraesCS4A01G225600 chr4D 47324360 47332464 8104 True 573.250000 987 87.929750 4037 5986 4 chr4D.!!$R1 1949
5 TraesCS4A01G225600 chr4B 68117035 68124317 7282 False 607.877778 2148 88.670222 208 5986 9 chr4B.!!$F1 5778
6 TraesCS4A01G225600 chr4B 68955761 68957197 1436 True 336.200000 590 88.756500 5405 5985 2 chr4B.!!$R2 580
7 TraesCS4A01G225600 chr1A 303852731 303853430 699 False 225.500000 327 87.980000 2743 3504 2 chr1A.!!$F3 761

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
472 737 2.350522 ACGTAATCAGCAGCTTTGAGG 58.649 47.619 0.00 0.00 0.00 3.86 F
1525 2104 0.333993 TTGCCTACTACTCCCTCCGT 59.666 55.000 0.00 0.00 0.00 4.69 F
2410 2996 0.899720 CCCTGGCATCAACATTGCTT 59.100 50.000 0.00 0.00 40.03 3.91 F
2417 3003 3.307782 GGCATCAACATTGCTTGTAATGC 59.692 43.478 20.22 20.22 46.64 3.56 F
2467 3053 3.358111 TTTCAAATGGCTCCCGTGATA 57.642 42.857 0.00 0.00 0.00 2.15 F
4380 7020 0.107214 CCAGGAGGAAATGCGCCTTA 60.107 55.000 4.18 0.00 35.44 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2455 3041 1.148273 TGGCATTATCACGGGAGCC 59.852 57.895 8.66 8.66 42.32 4.70 R
3305 3896 2.099098 ACGACAACTTTGGCAAAAGAGG 59.901 45.455 20.65 13.06 44.81 3.69 R
3973 4695 0.250727 ACAAAGGATGGACCCGTGTG 60.251 55.000 0.00 0.00 40.05 3.82 R
4010 4732 0.316689 CTCGGGTGTCGCAAACAAAC 60.317 55.000 0.00 0.00 40.31 2.93 R
4444 7084 1.514553 GTAGGGACGTTTCCGAGGG 59.485 63.158 0.00 0.00 43.94 4.30 R
5350 8082 0.846693 ACCTTGCACCTCCAGTTCTT 59.153 50.000 0.00 0.00 0.00 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
170 171 7.550712 AGAATTTGGAAAATATTGTGCTCTCC 58.449 34.615 0.00 0.00 0.00 3.71
400 658 6.531594 CCTTTCTTCAAGGTTTTTCTCAACAC 59.468 38.462 0.00 0.00 46.72 3.32
402 660 6.194796 TCTTCAAGGTTTTTCTCAACACAG 57.805 37.500 0.00 0.00 0.00 3.66
403 661 5.943416 TCTTCAAGGTTTTTCTCAACACAGA 59.057 36.000 0.00 0.00 0.00 3.41
404 662 5.560966 TCAAGGTTTTTCTCAACACAGAC 57.439 39.130 0.00 0.00 0.00 3.51
405 663 5.007034 TCAAGGTTTTTCTCAACACAGACA 58.993 37.500 0.00 0.00 0.00 3.41
407 665 5.505173 AGGTTTTTCTCAACACAGACATG 57.495 39.130 0.00 0.00 0.00 3.21
408 666 4.949856 AGGTTTTTCTCAACACAGACATGT 59.050 37.500 0.00 0.00 41.57 3.21
409 667 5.418840 AGGTTTTTCTCAACACAGACATGTT 59.581 36.000 0.00 0.00 43.67 2.71
412 670 7.117667 GGTTTTTCTCAACACAGACATGTTTTT 59.882 33.333 0.00 0.00 40.89 1.94
472 737 2.350522 ACGTAATCAGCAGCTTTGAGG 58.649 47.619 0.00 0.00 0.00 3.86
500 765 4.380531 TCTCTCAATCGCCATTTGTATCC 58.619 43.478 0.00 0.00 0.00 2.59
567 835 5.826737 CGTCCTACTCATCCCTTTTACTCTA 59.173 44.000 0.00 0.00 0.00 2.43
754 1266 9.762933 AACATTCTGTGCATATTTACAGTTTTT 57.237 25.926 13.17 4.05 43.59 1.94
1245 1821 4.604843 TTCTGAAGCTAATCATGCGTTG 57.395 40.909 0.00 0.00 35.28 4.10
1396 1975 1.571919 ACCGAAGCTAATCATGCGTC 58.428 50.000 0.00 0.00 36.01 5.19
1518 2097 5.044558 GTGCTGAATAGTTGCCTACTACTC 58.955 45.833 0.00 0.00 41.99 2.59
1520 2099 4.501743 GCTGAATAGTTGCCTACTACTCCC 60.502 50.000 3.16 0.00 41.99 4.30
1522 2101 4.894114 TGAATAGTTGCCTACTACTCCCTC 59.106 45.833 3.16 0.00 41.99 4.30
1524 2103 0.745468 GTTGCCTACTACTCCCTCCG 59.255 60.000 0.00 0.00 0.00 4.63
1525 2104 0.333993 TTGCCTACTACTCCCTCCGT 59.666 55.000 0.00 0.00 0.00 4.69
1526 2105 0.333993 TGCCTACTACTCCCTCCGTT 59.666 55.000 0.00 0.00 0.00 4.44
1528 2107 1.689984 CCTACTACTCCCTCCGTTCC 58.310 60.000 0.00 0.00 0.00 3.62
1529 2108 1.214923 CCTACTACTCCCTCCGTTCCT 59.785 57.143 0.00 0.00 0.00 3.36
1530 2109 2.441001 CCTACTACTCCCTCCGTTCCTA 59.559 54.545 0.00 0.00 0.00 2.94
1531 2110 3.117738 CCTACTACTCCCTCCGTTCCTAA 60.118 52.174 0.00 0.00 0.00 2.69
1532 2111 3.463048 ACTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
1534 2113 5.134725 ACTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
1535 2114 5.713807 ACTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
1538 2117 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
1541 2120 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
1542 2121 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
1544 2123 7.991460 CCCTCCGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
1545 2124 9.392259 CCTCCGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
1574 2153 9.331466 AGATTCTAATATGGACTACATGTGGAT 57.669 33.333 16.98 1.65 40.82 3.41
1575 2154 9.376075 GATTCTAATATGGACTACATGTGGATG 57.624 37.037 16.98 2.53 40.82 3.51
1576 2155 7.855784 TCTAATATGGACTACATGTGGATGT 57.144 36.000 16.98 5.81 45.24 3.06
1577 2156 8.950007 TCTAATATGGACTACATGTGGATGTA 57.050 34.615 16.98 3.89 41.27 2.29
1578 2157 9.547279 TCTAATATGGACTACATGTGGATGTAT 57.453 33.333 16.98 7.13 42.87 2.29
1579 2158 9.591792 CTAATATGGACTACATGTGGATGTATG 57.408 37.037 16.98 0.00 42.87 2.39
1580 2159 5.894298 ATGGACTACATGTGGATGTATGT 57.106 39.130 16.98 0.00 42.87 2.29
1581 2160 6.994421 ATGGACTACATGTGGATGTATGTA 57.006 37.500 16.98 0.00 42.87 2.29
1582 2161 6.800072 TGGACTACATGTGGATGTATGTAA 57.200 37.500 16.98 0.00 42.87 2.41
1584 2163 7.045416 TGGACTACATGTGGATGTATGTAAAC 58.955 38.462 16.98 0.00 42.87 2.01
1585 2164 7.045416 GGACTACATGTGGATGTATGTAAACA 58.955 38.462 16.98 0.00 42.87 2.83
1586 2165 7.715249 GGACTACATGTGGATGTATGTAAACAT 59.285 37.037 16.98 0.63 42.87 2.71
1616 2195 7.934855 AGAGTGTAGATTCATTCATTTTGCT 57.065 32.000 0.00 0.00 0.00 3.91
1617 2196 8.345724 AGAGTGTAGATTCATTCATTTTGCTT 57.654 30.769 0.00 0.00 0.00 3.91
1618 2197 8.457261 AGAGTGTAGATTCATTCATTTTGCTTC 58.543 33.333 0.00 0.00 0.00 3.86
1619 2198 7.246311 AGTGTAGATTCATTCATTTTGCTTCG 58.754 34.615 0.00 0.00 0.00 3.79
1620 2199 7.023575 GTGTAGATTCATTCATTTTGCTTCGT 58.976 34.615 0.00 0.00 0.00 3.85
1621 2200 8.175069 GTGTAGATTCATTCATTTTGCTTCGTA 58.825 33.333 0.00 0.00 0.00 3.43
1622 2201 8.892723 TGTAGATTCATTCATTTTGCTTCGTAT 58.107 29.630 0.00 0.00 0.00 3.06
1623 2202 9.162793 GTAGATTCATTCATTTTGCTTCGTATG 57.837 33.333 0.00 0.00 0.00 2.39
1624 2203 7.765307 AGATTCATTCATTTTGCTTCGTATGT 58.235 30.769 0.00 0.00 0.00 2.29
1626 2205 9.162793 GATTCATTCATTTTGCTTCGTATGTAG 57.837 33.333 0.00 0.00 0.00 2.74
1628 2207 8.039603 TCATTCATTTTGCTTCGTATGTAGTT 57.960 30.769 0.00 0.00 0.00 2.24
1630 2209 9.767684 CATTCATTTTGCTTCGTATGTAGTTTA 57.232 29.630 0.00 0.00 0.00 2.01
1672 2251 7.867160 AGATTTATATTTAGGAACGGAGGGA 57.133 36.000 0.00 0.00 0.00 4.20
1673 2252 7.908453 AGATTTATATTTAGGAACGGAGGGAG 58.092 38.462 0.00 0.00 0.00 4.30
1674 2253 7.513091 AGATTTATATTTAGGAACGGAGGGAGT 59.487 37.037 0.00 0.00 0.00 3.85
1677 2256 8.731591 TTATATTTAGGAACGGAGGGAGTAAT 57.268 34.615 0.00 0.00 0.00 1.89
1678 2257 9.827198 TTATATTTAGGAACGGAGGGAGTAATA 57.173 33.333 0.00 0.00 0.00 0.98
1679 2258 8.912614 ATATTTAGGAACGGAGGGAGTAATAT 57.087 34.615 0.00 0.00 0.00 1.28
1680 2259 7.628501 ATTTAGGAACGGAGGGAGTAATATT 57.371 36.000 0.00 0.00 0.00 1.28
1681 2260 7.441903 TTTAGGAACGGAGGGAGTAATATTT 57.558 36.000 0.00 0.00 0.00 1.40
1682 2261 5.970501 AGGAACGGAGGGAGTAATATTTT 57.029 39.130 0.00 0.00 0.00 1.82
1683 2262 6.323210 AGGAACGGAGGGAGTAATATTTTT 57.677 37.500 0.00 0.00 0.00 1.94
1685 2264 6.158169 AGGAACGGAGGGAGTAATATTTTTCT 59.842 38.462 0.00 0.00 0.00 2.52
1686 2265 6.827251 GGAACGGAGGGAGTAATATTTTTCTT 59.173 38.462 0.00 0.00 0.00 2.52
1687 2266 7.338703 GGAACGGAGGGAGTAATATTTTTCTTT 59.661 37.037 0.00 0.00 0.00 2.52
1880 2462 7.003939 ACATTGCAGCAAAAGAACTTTAAAC 57.996 32.000 12.97 0.00 31.63 2.01
1938 2522 8.761575 AATTTCAAAGTTAATCATGCATCGTT 57.238 26.923 0.00 0.00 0.00 3.85
1955 2539 5.439828 CATCGTTTCATCGTGAACTTTTGA 58.560 37.500 0.76 0.00 35.89 2.69
2086 2670 8.038351 TCATCACTGTCGGAAACTATGAAATTA 58.962 33.333 0.00 0.00 0.00 1.40
2237 2823 5.827797 TGTATGTCTTTGAAGTTTCCAAGCT 59.172 36.000 1.86 0.00 31.91 3.74
2296 2882 9.851686 AGGCATTTATAGATGAACTTCACATAA 57.148 29.630 7.42 0.00 0.00 1.90
2373 2959 3.949754 TGGTCCTTGATTCTGATGATTGC 59.050 43.478 0.00 0.00 0.00 3.56
2382 2968 5.183713 TGATTCTGATGATTGCGAAAAGGTT 59.816 36.000 0.00 0.00 0.00 3.50
2385 2971 5.841810 TCTGATGATTGCGAAAAGGTTTTT 58.158 33.333 0.00 0.00 0.00 1.94
2408 2994 1.153509 GCCCTGGCATCAACATTGC 60.154 57.895 2.58 0.00 41.49 3.56
2410 2996 0.899720 CCCTGGCATCAACATTGCTT 59.100 50.000 0.00 0.00 40.03 3.91
2417 3003 3.307782 GGCATCAACATTGCTTGTAATGC 59.692 43.478 20.22 20.22 46.64 3.56
2432 3018 4.973168 TGTAATGCTGAAGAAAGAGGTGT 58.027 39.130 0.00 0.00 0.00 4.16
2467 3053 3.358111 TTTCAAATGGCTCCCGTGATA 57.642 42.857 0.00 0.00 0.00 2.15
2635 3222 6.034363 CGTTCTCTCAGTTATCTGTTCACATG 59.966 42.308 0.83 0.00 41.91 3.21
2673 3261 4.501071 ACTATATTGCCGTCGTTTTCACT 58.499 39.130 0.00 0.00 0.00 3.41
2762 3350 6.156775 TGAGGATTCAGGTTACATTCTGATCA 59.843 38.462 0.00 0.00 39.42 2.92
2763 3351 7.146715 AGGATTCAGGTTACATTCTGATCAT 57.853 36.000 0.00 0.00 39.42 2.45
2968 3558 7.298122 AGCATTACTTTCTGAATTACGTGTTG 58.702 34.615 0.00 0.00 0.00 3.33
3262 3853 7.171678 ACTTCTGCTCTTGTATGTTTTACTGTC 59.828 37.037 0.00 0.00 0.00 3.51
3263 3854 5.932303 TCTGCTCTTGTATGTTTTACTGTCC 59.068 40.000 0.00 0.00 0.00 4.02
3265 3856 5.932303 TGCTCTTGTATGTTTTACTGTCCTC 59.068 40.000 0.00 0.00 0.00 3.71
3266 3857 6.166982 GCTCTTGTATGTTTTACTGTCCTCT 58.833 40.000 0.00 0.00 0.00 3.69
3267 3858 6.651225 GCTCTTGTATGTTTTACTGTCCTCTT 59.349 38.462 0.00 0.00 0.00 2.85
3268 3859 7.173390 GCTCTTGTATGTTTTACTGTCCTCTTT 59.827 37.037 0.00 0.00 0.00 2.52
3269 3860 8.603242 TCTTGTATGTTTTACTGTCCTCTTTC 57.397 34.615 0.00 0.00 0.00 2.62
3270 3861 8.208224 TCTTGTATGTTTTACTGTCCTCTTTCA 58.792 33.333 0.00 0.00 0.00 2.69
3271 3862 8.740123 TTGTATGTTTTACTGTCCTCTTTCAA 57.260 30.769 0.00 0.00 0.00 2.69
3272 3863 8.378172 TGTATGTTTTACTGTCCTCTTTCAAG 57.622 34.615 0.00 0.00 0.00 3.02
3273 3864 7.990886 TGTATGTTTTACTGTCCTCTTTCAAGT 59.009 33.333 0.00 0.00 0.00 3.16
3274 3865 6.920569 TGTTTTACTGTCCTCTTTCAAGTC 57.079 37.500 0.00 0.00 0.00 3.01
3275 3866 6.411376 TGTTTTACTGTCCTCTTTCAAGTCA 58.589 36.000 0.00 0.00 0.00 3.41
3276 3867 6.315393 TGTTTTACTGTCCTCTTTCAAGTCAC 59.685 38.462 0.00 0.00 0.00 3.67
3277 3868 5.607939 TTACTGTCCTCTTTCAAGTCACA 57.392 39.130 0.00 0.00 0.00 3.58
3278 3869 4.487714 ACTGTCCTCTTTCAAGTCACAA 57.512 40.909 0.00 0.00 0.00 3.33
3279 3870 4.843728 ACTGTCCTCTTTCAAGTCACAAA 58.156 39.130 0.00 0.00 0.00 2.83
3280 3871 4.636206 ACTGTCCTCTTTCAAGTCACAAAC 59.364 41.667 0.00 0.00 0.00 2.93
3281 3872 4.843728 TGTCCTCTTTCAAGTCACAAACT 58.156 39.130 0.00 0.00 41.10 2.66
3283 3874 5.354234 TGTCCTCTTTCAAGTCACAAACTTC 59.646 40.000 0.00 0.00 45.28 3.01
3284 3875 5.586643 GTCCTCTTTCAAGTCACAAACTTCT 59.413 40.000 0.00 0.00 45.28 2.85
3285 3876 5.586243 TCCTCTTTCAAGTCACAAACTTCTG 59.414 40.000 0.00 0.00 45.28 3.02
3286 3877 5.235305 TCTTTCAAGTCACAAACTTCTGC 57.765 39.130 0.00 0.00 45.28 4.26
3287 3878 4.943705 TCTTTCAAGTCACAAACTTCTGCT 59.056 37.500 0.00 0.00 45.28 4.24
3288 3879 4.882671 TTCAAGTCACAAACTTCTGCTC 57.117 40.909 0.00 0.00 45.28 4.26
3289 3880 4.142609 TCAAGTCACAAACTTCTGCTCT 57.857 40.909 0.00 0.00 45.28 4.09
3290 3881 4.517285 TCAAGTCACAAACTTCTGCTCTT 58.483 39.130 0.00 0.00 45.28 2.85
3291 3882 4.333649 TCAAGTCACAAACTTCTGCTCTTG 59.666 41.667 0.00 0.00 45.28 3.02
3292 3883 3.878778 AGTCACAAACTTCTGCTCTTGT 58.121 40.909 0.00 0.00 33.03 3.16
3293 3884 5.023533 AGTCACAAACTTCTGCTCTTGTA 57.976 39.130 0.00 0.00 33.03 2.41
3294 3885 5.615289 AGTCACAAACTTCTGCTCTTGTAT 58.385 37.500 0.00 0.00 33.03 2.29
3295 3886 5.468072 AGTCACAAACTTCTGCTCTTGTATG 59.532 40.000 0.00 0.00 33.03 2.39
3296 3887 5.237344 GTCACAAACTTCTGCTCTTGTATGT 59.763 40.000 0.00 0.00 31.00 2.29
3297 3888 5.822519 TCACAAACTTCTGCTCTTGTATGTT 59.177 36.000 0.00 0.00 31.00 2.71
3298 3889 6.318648 TCACAAACTTCTGCTCTTGTATGTTT 59.681 34.615 0.00 0.00 31.00 2.83
3299 3890 6.974622 CACAAACTTCTGCTCTTGTATGTTTT 59.025 34.615 0.00 0.00 31.00 2.43
3300 3891 8.128582 CACAAACTTCTGCTCTTGTATGTTTTA 58.871 33.333 0.00 0.00 31.00 1.52
3301 3892 8.129211 ACAAACTTCTGCTCTTGTATGTTTTAC 58.871 33.333 0.00 0.00 30.41 2.01
3302 3893 8.345565 CAAACTTCTGCTCTTGTATGTTTTACT 58.654 33.333 0.00 0.00 0.00 2.24
3303 3894 7.426929 ACTTCTGCTCTTGTATGTTTTACTG 57.573 36.000 0.00 0.00 0.00 2.74
3304 3895 6.992715 ACTTCTGCTCTTGTATGTTTTACTGT 59.007 34.615 0.00 0.00 0.00 3.55
3305 3896 7.171678 ACTTCTGCTCTTGTATGTTTTACTGTC 59.828 37.037 0.00 0.00 0.00 3.51
3337 3928 6.017026 TGCCAAAGTTGTCGTTCATAATGTTA 60.017 34.615 0.00 0.00 0.00 2.41
3375 3966 9.859427 TTTTAGATTTCTGTATGAGCATTTTGG 57.141 29.630 0.00 0.00 0.00 3.28
3651 4369 8.783093 TCAGATTGTCTTGTAAAGTTGGTAATG 58.217 33.333 0.00 0.00 46.34 1.90
3783 4505 3.438087 CACTTTACATCAGGCTGGAGTTG 59.562 47.826 15.73 9.97 0.00 3.16
3828 4550 7.232127 CCCAGCCTAATCATATTTGTTGATCTT 59.768 37.037 0.00 0.00 32.72 2.40
3872 4594 4.610333 GGAATTAGGTCATTCCCAAAGGT 58.390 43.478 1.52 0.00 44.71 3.50
3890 4612 6.238897 CCAAAGGTTATGCAGTTGAACACTTA 60.239 38.462 0.00 0.00 30.92 2.24
3894 4616 5.183140 GGTTATGCAGTTGAACACTTACCAT 59.817 40.000 0.00 0.00 30.92 3.55
3957 4679 3.463048 AGAAGTGGCATCCCAGATTTT 57.537 42.857 0.00 0.00 43.18 1.82
3973 4695 9.847224 TCCCAGATTTTACATTAGGAAAGATAC 57.153 33.333 0.00 0.00 0.00 2.24
4010 4732 0.322546 GTGGGCCTGGTTGGTTAGAG 60.323 60.000 4.53 0.00 38.35 2.43
4017 4739 3.383505 GCCTGGTTGGTTAGAGTTTGTTT 59.616 43.478 0.00 0.00 38.35 2.83
4025 4747 3.547413 GGTTAGAGTTTGTTTGCGACACC 60.547 47.826 0.00 0.00 38.18 4.16
4209 6849 3.115390 TCAGCTACCCCTAAAAGAGCAT 58.885 45.455 0.00 0.00 35.55 3.79
4318 6958 3.754323 CGGTAGGCTGAAACAAATTGGTA 59.246 43.478 0.00 0.00 0.00 3.25
4380 7020 0.107214 CCAGGAGGAAATGCGCCTTA 60.107 55.000 4.18 0.00 35.44 2.69
4444 7084 3.053455 CGAGTCCGATAAATCAAGAGGC 58.947 50.000 0.00 0.00 38.22 4.70
4483 7123 3.748048 ACGTAATATCATCCACTGCATGC 59.252 43.478 11.82 11.82 0.00 4.06
4526 7166 1.865622 GTCGACAAGAGAGCTCGCG 60.866 63.158 11.55 0.00 34.09 5.87
4537 7177 4.443266 GCTCGCGCCCTTCAGTCT 62.443 66.667 0.00 0.00 0.00 3.24
4538 7178 3.064987 GCTCGCGCCCTTCAGTCTA 62.065 63.158 0.00 0.00 0.00 2.59
4540 7180 0.108804 CTCGCGCCCTTCAGTCTAAA 60.109 55.000 0.00 0.00 0.00 1.85
4546 7186 2.347731 GCCCTTCAGTCTAAAGTTCCG 58.652 52.381 0.00 0.00 0.00 4.30
4552 7192 6.313164 CCCTTCAGTCTAAAGTTCCGATTTAC 59.687 42.308 0.00 0.00 0.00 2.01
4554 7194 6.017400 TCAGTCTAAAGTTCCGATTTACGT 57.983 37.500 0.00 0.00 40.78 3.57
4558 7198 4.853196 TCTAAAGTTCCGATTTACGTGTCG 59.147 41.667 0.00 5.56 40.78 4.35
4559 7199 2.995466 AGTTCCGATTTACGTGTCGA 57.005 45.000 17.57 5.20 40.11 4.20
4604 7247 1.815003 ACAGCCTGTACACCGTAGTAC 59.185 52.381 0.00 7.48 43.58 2.73
4615 7262 0.379669 CCGTAGTACGTCGGCATCTT 59.620 55.000 20.60 0.00 40.58 2.40
4620 7267 2.607187 AGTACGTCGGCATCTTTTCTG 58.393 47.619 0.00 0.00 0.00 3.02
4621 7268 2.230508 AGTACGTCGGCATCTTTTCTGA 59.769 45.455 0.00 0.00 0.00 3.27
4622 7269 1.714794 ACGTCGGCATCTTTTCTGAG 58.285 50.000 0.00 0.00 0.00 3.35
4624 7271 0.371645 GTCGGCATCTTTTCTGAGCG 59.628 55.000 0.00 0.00 0.00 5.03
4636 7283 0.321034 TCTGAGCGCATTTCAGCTGT 60.321 50.000 17.72 0.00 44.69 4.40
4641 7288 1.131883 AGCGCATTTCAGCTGTCAATC 59.868 47.619 14.67 7.05 42.82 2.67
4642 7289 1.135603 GCGCATTTCAGCTGTCAATCA 60.136 47.619 14.67 0.00 0.00 2.57
4646 7293 4.438336 CGCATTTCAGCTGTCAATCAGATT 60.438 41.667 14.67 0.00 46.27 2.40
4648 7295 6.558009 GCATTTCAGCTGTCAATCAGATTTA 58.442 36.000 14.67 0.00 46.27 1.40
4649 7296 6.691818 GCATTTCAGCTGTCAATCAGATTTAG 59.308 38.462 14.67 1.17 46.27 1.85
4652 7299 8.484641 TTTCAGCTGTCAATCAGATTTAGTAG 57.515 34.615 14.67 0.00 46.27 2.57
4655 7302 8.409371 TCAGCTGTCAATCAGATTTAGTAGTAG 58.591 37.037 14.67 0.00 46.27 2.57
4657 7304 8.754080 AGCTGTCAATCAGATTTAGTAGTAGTT 58.246 33.333 0.00 0.00 46.27 2.24
4665 7312 9.900710 ATCAGATTTAGTAGTAGTTATTCGCTG 57.099 33.333 0.00 0.00 0.00 5.18
4666 7313 8.900781 TCAGATTTAGTAGTAGTTATTCGCTGT 58.099 33.333 0.00 0.00 0.00 4.40
4677 7324 9.464714 AGTAGTTATTCGCTGTATGTATTCTTG 57.535 33.333 0.00 0.00 0.00 3.02
4688 7335 7.499232 GCTGTATGTATTCTTGAACCTGGTAAT 59.501 37.037 0.00 0.00 0.00 1.89
4689 7336 8.731275 TGTATGTATTCTTGAACCTGGTAATG 57.269 34.615 0.00 0.00 0.00 1.90
4699 7346 5.245531 TGAACCTGGTAATGTTTCAGCTAG 58.754 41.667 0.00 0.00 0.00 3.42
4704 7351 2.356069 GGTAATGTTTCAGCTAGCCTGC 59.644 50.000 12.13 0.00 41.50 4.85
4728 7375 6.346040 GCTGTCTTAATGCAACATTTTGTGTC 60.346 38.462 0.00 0.00 41.14 3.67
4729 7376 6.804677 TGTCTTAATGCAACATTTTGTGTCT 58.195 32.000 0.00 0.00 41.14 3.41
4730 7377 6.696583 TGTCTTAATGCAACATTTTGTGTCTG 59.303 34.615 0.00 0.00 41.14 3.51
4731 7378 6.144402 GTCTTAATGCAACATTTTGTGTCTGG 59.856 38.462 0.00 0.00 41.14 3.86
4732 7379 4.669206 AATGCAACATTTTGTGTCTGGA 57.331 36.364 0.00 0.00 41.14 3.86
4750 7397 2.364970 TGGAAACAGAACATTTGCAGGG 59.635 45.455 0.00 0.00 33.12 4.45
4770 7417 3.056891 GGGAGTATGCTGCTGAGTATCTC 60.057 52.174 1.81 0.00 34.92 2.75
4771 7418 3.365868 GGAGTATGCTGCTGAGTATCTCG 60.366 52.174 0.00 0.00 34.92 4.04
4781 7428 1.313772 GAGTATCTCGCAGCTGGAGA 58.686 55.000 26.77 26.77 44.08 3.71
4794 7441 0.246086 CTGGAGAGCAGACTGTGACC 59.754 60.000 3.99 4.09 0.00 4.02
4798 7445 1.214062 GAGCAGACTGTGACCCTCG 59.786 63.158 3.99 0.00 0.00 4.63
4802 7449 0.039074 CAGACTGTGACCCTCGTGAC 60.039 60.000 0.00 0.00 0.00 3.67
4811 7458 2.418910 CCCTCGTGACGGCAGAGAT 61.419 63.158 16.44 0.00 34.13 2.75
4819 7466 0.809241 GACGGCAGAGATGAGCAAGG 60.809 60.000 0.00 0.00 0.00 3.61
4837 7484 1.598701 GGCATGGGAAGTCAAGGTGC 61.599 60.000 0.00 0.00 0.00 5.01
4842 7489 1.603739 GGAAGTCAAGGTGCACCCC 60.604 63.158 32.29 19.92 36.42 4.95
4843 7490 1.603739 GAAGTCAAGGTGCACCCCC 60.604 63.158 32.29 16.92 36.42 5.40
4859 7515 2.556287 CCGCGCAAAGGTTCTCAC 59.444 61.111 8.75 0.00 0.00 3.51
4861 7517 2.307309 CGCGCAAAGGTTCTCACGA 61.307 57.895 8.75 0.00 0.00 4.35
4871 7527 0.033504 GTTCTCACGAGAGGTTGGCA 59.966 55.000 10.08 0.00 42.34 4.92
4873 7529 1.112916 TCTCACGAGAGGTTGGCACA 61.113 55.000 10.08 0.00 42.34 4.57
4890 7546 1.064946 CAAGTTTGCCCGCGACAAA 59.935 52.632 19.11 19.11 34.74 2.83
4893 7549 2.409651 TTTGCCCGCGACAAACAC 59.590 55.556 19.11 0.00 32.27 3.32
4900 7556 0.041312 CCGCGACAAACACCTGAAAG 60.041 55.000 8.23 0.00 0.00 2.62
4903 7559 1.002792 GCGACAAACACCTGAAAGTCC 60.003 52.381 0.00 0.00 0.00 3.85
4911 7567 3.744660 ACACCTGAAAGTCCAAGACATC 58.255 45.455 0.00 0.00 34.60 3.06
4914 7570 2.746362 CCTGAAAGTCCAAGACATCTGC 59.254 50.000 0.00 0.00 34.60 4.26
4927 7583 0.322277 CATCTGCCTGTTCCAGCTGT 60.322 55.000 13.81 0.00 0.00 4.40
4932 7588 0.819259 GCCTGTTCCAGCTGTTGACA 60.819 55.000 13.81 12.62 0.00 3.58
4950 7606 1.903183 ACAGACCAGAGGAAGCTTACC 59.097 52.381 4.63 5.95 0.00 2.85
4975 7631 1.278238 GGTCGACATCATTCGTCACC 58.722 55.000 18.91 0.00 40.07 4.02
4983 7639 3.935203 ACATCATTCGTCACCATGAGAAC 59.065 43.478 0.00 0.00 32.91 3.01
4985 7641 2.301583 TCATTCGTCACCATGAGAACCA 59.698 45.455 0.00 0.00 0.00 3.67
4986 7642 2.455674 TTCGTCACCATGAGAACCAG 57.544 50.000 0.00 0.00 0.00 4.00
4995 7651 6.369065 GTCACCATGAGAACCAGTAGTTTTAG 59.631 42.308 0.00 0.00 39.40 1.85
5018 7674 2.462456 TCCAGCACATGAGAGTGAAC 57.538 50.000 0.00 0.00 42.05 3.18
5034 7690 1.338105 TGAACCTCTGATGGCTGTTCG 60.338 52.381 0.00 0.00 38.46 3.95
5047 7703 1.732405 GCTGTTCGGCTGGTATTTTGC 60.732 52.381 0.00 0.00 0.00 3.68
5063 7730 7.388224 TGGTATTTTGCGTGTTTCTGTAATCTA 59.612 33.333 0.00 0.00 0.00 1.98
5069 7736 6.270815 TGCGTGTTTCTGTAATCTATAGACC 58.729 40.000 4.10 0.00 0.00 3.85
5070 7737 6.127563 TGCGTGTTTCTGTAATCTATAGACCA 60.128 38.462 4.10 1.75 0.00 4.02
5092 7759 2.294074 GTGGTTGTGTGGCTACTTTCA 58.706 47.619 0.64 0.00 0.00 2.69
5093 7760 2.290641 GTGGTTGTGTGGCTACTTTCAG 59.709 50.000 0.64 0.00 0.00 3.02
5096 7763 3.251004 GGTTGTGTGGCTACTTTCAGAAG 59.749 47.826 0.64 0.00 38.87 2.85
5100 7767 5.054477 TGTGTGGCTACTTTCAGAAGTAAC 58.946 41.667 0.64 0.00 45.20 2.50
5110 7777 4.675976 TTCAGAAGTAACGGAGAAACCA 57.324 40.909 0.00 0.00 38.90 3.67
5113 7780 5.617252 TCAGAAGTAACGGAGAAACCAATT 58.383 37.500 0.00 0.00 38.90 2.32
5114 7781 5.468746 TCAGAAGTAACGGAGAAACCAATTG 59.531 40.000 0.00 0.00 38.90 2.32
5115 7782 4.760204 AGAAGTAACGGAGAAACCAATTGG 59.240 41.667 23.31 23.31 38.90 3.16
5116 7783 4.360951 AGTAACGGAGAAACCAATTGGA 57.639 40.909 31.22 0.85 38.90 3.53
5119 7786 5.773176 AGTAACGGAGAAACCAATTGGAATT 59.227 36.000 31.22 22.89 38.90 2.17
5122 7789 4.021456 ACGGAGAAACCAATTGGAATTTCC 60.021 41.667 31.22 25.77 38.90 3.13
5124 7791 5.417580 CGGAGAAACCAATTGGAATTTCCTA 59.582 40.000 31.22 9.42 36.49 2.94
5125 7792 6.096846 CGGAGAAACCAATTGGAATTTCCTAT 59.903 38.462 31.22 14.31 36.49 2.57
5126 7793 7.363793 CGGAGAAACCAATTGGAATTTCCTATT 60.364 37.037 31.22 16.37 41.49 1.73
5129 7796 9.768215 AGAAACCAATTGGAATTTCCTATTAGA 57.232 29.630 31.22 0.00 39.39 2.10
5134 7801 8.850156 CCAATTGGAATTTCCTATTAGAATCGT 58.150 33.333 20.50 0.00 39.39 3.73
5142 7809 9.915629 AATTTCCTATTAGAATCGTAGTAGCTG 57.084 33.333 0.00 0.00 0.00 4.24
5143 7810 7.450124 TTCCTATTAGAATCGTAGTAGCTGG 57.550 40.000 0.00 0.00 0.00 4.85
5144 7811 5.944599 TCCTATTAGAATCGTAGTAGCTGGG 59.055 44.000 0.00 0.00 0.00 4.45
5146 7813 6.883217 CCTATTAGAATCGTAGTAGCTGGGTA 59.117 42.308 0.00 0.00 0.00 3.69
5163 7832 5.615289 CTGGGTAATTCAGGGAGTTATCTG 58.385 45.833 0.00 0.00 0.00 2.90
5166 7835 6.183361 TGGGTAATTCAGGGAGTTATCTGATG 60.183 42.308 0.00 0.00 39.42 3.07
5172 7841 4.345257 TCAGGGAGTTATCTGATGTTAGGC 59.655 45.833 0.00 0.00 35.37 3.93
5180 7849 3.906720 TCTGATGTTAGGCTGGGTTAC 57.093 47.619 0.00 0.00 0.00 2.50
5183 7852 2.238646 TGATGTTAGGCTGGGTTACTGG 59.761 50.000 0.00 0.00 0.00 4.00
5187 7856 1.410004 TAGGCTGGGTTACTGGATCG 58.590 55.000 0.00 0.00 0.00 3.69
5191 7860 1.412710 GCTGGGTTACTGGATCGATGA 59.587 52.381 0.54 0.00 0.00 2.92
5194 7863 4.513442 CTGGGTTACTGGATCGATGAAAA 58.487 43.478 0.54 0.00 0.00 2.29
5197 7866 5.588648 TGGGTTACTGGATCGATGAAAAATC 59.411 40.000 0.54 0.00 0.00 2.17
5214 7883 7.994851 GAAAAATCGTTTTCTACTAGCTGTG 57.005 36.000 0.00 0.00 46.15 3.66
5215 7884 6.481954 AAAATCGTTTTCTACTAGCTGTGG 57.518 37.500 0.00 0.00 0.00 4.17
5217 7886 8.649733 AAAAATCGTTTTCTACTAGCTGTGGCT 61.650 37.037 0.00 0.00 41.39 4.75
5229 7898 1.064654 GCTGTGGCTGCTAGTTATTGC 59.935 52.381 0.00 0.00 35.22 3.56
5230 7899 2.358957 CTGTGGCTGCTAGTTATTGCA 58.641 47.619 0.00 0.00 37.63 4.08
5231 7900 2.749076 CTGTGGCTGCTAGTTATTGCAA 59.251 45.455 0.00 0.00 38.81 4.08
5232 7901 3.355378 TGTGGCTGCTAGTTATTGCAAT 58.645 40.909 17.56 17.56 38.81 3.56
5233 7902 3.763360 TGTGGCTGCTAGTTATTGCAATT 59.237 39.130 18.75 1.86 38.81 2.32
5234 7903 4.220382 TGTGGCTGCTAGTTATTGCAATTT 59.780 37.500 18.75 6.63 38.81 1.82
5235 7904 4.800471 GTGGCTGCTAGTTATTGCAATTTC 59.200 41.667 18.75 10.96 38.81 2.17
5236 7905 4.142182 TGGCTGCTAGTTATTGCAATTTCC 60.142 41.667 18.75 5.94 38.81 3.13
5237 7906 4.098501 GGCTGCTAGTTATTGCAATTTCCT 59.901 41.667 18.75 12.92 38.81 3.36
5238 7907 5.039333 GCTGCTAGTTATTGCAATTTCCTG 58.961 41.667 18.75 7.10 38.81 3.86
5239 7908 5.393461 GCTGCTAGTTATTGCAATTTCCTGT 60.393 40.000 18.75 0.00 38.81 4.00
5240 7909 6.588719 TGCTAGTTATTGCAATTTCCTGTT 57.411 33.333 18.75 0.00 36.15 3.16
5241 7910 7.628366 GCTGCTAGTTATTGCAATTTCCTGTTA 60.628 37.037 18.75 0.00 38.81 2.41
5242 7911 7.761409 TGCTAGTTATTGCAATTTCCTGTTAG 58.239 34.615 18.75 10.73 36.15 2.34
5243 7912 7.609918 TGCTAGTTATTGCAATTTCCTGTTAGA 59.390 33.333 18.75 0.00 36.15 2.10
5244 7913 8.458843 GCTAGTTATTGCAATTTCCTGTTAGAA 58.541 33.333 18.75 0.00 0.00 2.10
5245 7914 9.994432 CTAGTTATTGCAATTTCCTGTTAGAAG 57.006 33.333 18.75 1.30 0.00 2.85
5246 7915 7.315890 AGTTATTGCAATTTCCTGTTAGAAGC 58.684 34.615 18.75 0.00 0.00 3.86
5247 7916 4.519540 TTGCAATTTCCTGTTAGAAGCC 57.480 40.909 0.00 0.00 0.00 4.35
5248 7917 3.495331 TGCAATTTCCTGTTAGAAGCCA 58.505 40.909 0.00 0.00 0.00 4.75
5249 7918 3.894427 TGCAATTTCCTGTTAGAAGCCAA 59.106 39.130 0.00 0.00 0.00 4.52
5250 7919 4.022068 TGCAATTTCCTGTTAGAAGCCAAG 60.022 41.667 0.00 0.00 0.00 3.61
5251 7920 4.021981 GCAATTTCCTGTTAGAAGCCAAGT 60.022 41.667 0.00 0.00 0.00 3.16
5252 7921 5.509670 GCAATTTCCTGTTAGAAGCCAAGTT 60.510 40.000 0.00 0.00 0.00 2.66
5253 7922 6.515832 CAATTTCCTGTTAGAAGCCAAGTTT 58.484 36.000 0.00 0.00 0.00 2.66
5254 7923 5.767816 TTTCCTGTTAGAAGCCAAGTTTC 57.232 39.130 0.00 0.00 0.00 2.78
5255 7924 4.431416 TCCTGTTAGAAGCCAAGTTTCA 57.569 40.909 0.00 0.00 0.00 2.69
5256 7925 4.985538 TCCTGTTAGAAGCCAAGTTTCAT 58.014 39.130 0.00 0.00 0.00 2.57
5257 7926 5.385198 TCCTGTTAGAAGCCAAGTTTCATT 58.615 37.500 0.00 0.00 0.00 2.57
5258 7927 5.473504 TCCTGTTAGAAGCCAAGTTTCATTC 59.526 40.000 0.00 0.00 0.00 2.67
5259 7928 5.474876 CCTGTTAGAAGCCAAGTTTCATTCT 59.525 40.000 0.00 0.00 34.71 2.40
5260 7929 6.015940 CCTGTTAGAAGCCAAGTTTCATTCTT 60.016 38.462 0.00 0.00 32.69 2.52
5261 7930 7.346751 TGTTAGAAGCCAAGTTTCATTCTTT 57.653 32.000 0.00 0.00 32.69 2.52
5262 7931 7.425606 TGTTAGAAGCCAAGTTTCATTCTTTC 58.574 34.615 0.00 0.00 32.69 2.62
5263 7932 7.285401 TGTTAGAAGCCAAGTTTCATTCTTTCT 59.715 33.333 0.00 0.00 32.69 2.52
5281 7950 7.324388 TCTTTCTTTCCCCTGTGTTTCTATA 57.676 36.000 0.00 0.00 0.00 1.31
5282 7951 7.928873 TCTTTCTTTCCCCTGTGTTTCTATAT 58.071 34.615 0.00 0.00 0.00 0.86
5284 7953 9.853177 CTTTCTTTCCCCTGTGTTTCTATATAT 57.147 33.333 0.00 0.00 0.00 0.86
5287 7956 8.998814 TCTTTCCCCTGTGTTTCTATATATCAA 58.001 33.333 0.00 0.00 0.00 2.57
5289 7958 6.769512 TCCCCTGTGTTTCTATATATCAAGC 58.230 40.000 0.00 0.00 0.00 4.01
5291 7960 6.652481 CCCCTGTGTTTCTATATATCAAGCAG 59.348 42.308 0.00 0.00 0.00 4.24
5308 7977 8.757982 ATCAAGCAGAAATACATAATGAAGGT 57.242 30.769 0.00 0.00 0.00 3.50
5310 7979 9.851686 TCAAGCAGAAATACATAATGAAGGTAT 57.148 29.630 0.00 0.00 0.00 2.73
5311 7980 9.888878 CAAGCAGAAATACATAATGAAGGTATG 57.111 33.333 0.00 0.00 35.47 2.39
5313 7982 9.851686 AGCAGAAATACATAATGAAGGTATGAA 57.148 29.630 0.00 0.00 33.86 2.57
5327 8059 5.104259 AGGTATGAAGGGATGAAGTGAAC 57.896 43.478 0.00 0.00 0.00 3.18
5328 8060 4.080299 AGGTATGAAGGGATGAAGTGAACC 60.080 45.833 0.00 0.00 0.00 3.62
5329 8061 4.324254 GGTATGAAGGGATGAAGTGAACCA 60.324 45.833 0.00 0.00 0.00 3.67
5341 8073 3.814504 AGTGAACCACTTGGAATCCAT 57.185 42.857 1.39 0.00 42.59 3.41
5342 8074 3.690460 AGTGAACCACTTGGAATCCATC 58.310 45.455 1.39 0.00 42.59 3.51
5343 8075 3.331889 AGTGAACCACTTGGAATCCATCT 59.668 43.478 1.39 0.00 42.59 2.90
5344 8076 4.536090 AGTGAACCACTTGGAATCCATCTA 59.464 41.667 1.39 0.00 42.59 1.98
5345 8077 5.014123 AGTGAACCACTTGGAATCCATCTAA 59.986 40.000 1.39 0.00 42.59 2.10
5346 8078 5.888161 GTGAACCACTTGGAATCCATCTAAT 59.112 40.000 1.39 0.00 38.94 1.73
5347 8079 7.054124 GTGAACCACTTGGAATCCATCTAATA 58.946 38.462 1.39 0.00 38.94 0.98
5348 8080 7.227512 GTGAACCACTTGGAATCCATCTAATAG 59.772 40.741 1.39 0.00 38.94 1.73
5349 8081 7.127186 TGAACCACTTGGAATCCATCTAATAGA 59.873 37.037 1.39 0.00 38.94 1.98
5350 8082 7.451731 ACCACTTGGAATCCATCTAATAGAA 57.548 36.000 1.39 0.00 38.94 2.10
5351 8083 7.872138 ACCACTTGGAATCCATCTAATAGAAA 58.128 34.615 1.39 0.00 38.94 2.52
5352 8084 7.995488 ACCACTTGGAATCCATCTAATAGAAAG 59.005 37.037 1.39 0.00 38.94 2.62
5353 8085 8.213679 CCACTTGGAATCCATCTAATAGAAAGA 58.786 37.037 1.39 0.00 37.39 2.52
5354 8086 9.618890 CACTTGGAATCCATCTAATAGAAAGAA 57.381 33.333 1.39 0.00 31.53 2.52
5355 8087 9.620259 ACTTGGAATCCATCTAATAGAAAGAAC 57.380 33.333 1.39 0.00 31.53 3.01
5356 8088 9.844257 CTTGGAATCCATCTAATAGAAAGAACT 57.156 33.333 1.39 0.00 31.53 3.01
5357 8089 9.618890 TTGGAATCCATCTAATAGAAAGAACTG 57.381 33.333 1.39 0.00 31.53 3.16
5358 8090 8.213679 TGGAATCCATCTAATAGAAAGAACTGG 58.786 37.037 0.00 0.00 0.00 4.00
5359 8091 8.432805 GGAATCCATCTAATAGAAAGAACTGGA 58.567 37.037 9.64 9.64 36.85 3.86
5360 8092 9.487790 GAATCCATCTAATAGAAAGAACTGGAG 57.512 37.037 12.04 0.00 36.22 3.86
5361 8093 7.366847 TCCATCTAATAGAAAGAACTGGAGG 57.633 40.000 4.43 0.00 30.62 4.30
5362 8094 6.903534 TCCATCTAATAGAAAGAACTGGAGGT 59.096 38.462 4.43 0.00 30.62 3.85
5363 8095 6.989169 CCATCTAATAGAAAGAACTGGAGGTG 59.011 42.308 0.00 0.00 28.46 4.00
5364 8096 5.978814 TCTAATAGAAAGAACTGGAGGTGC 58.021 41.667 0.00 0.00 0.00 5.01
5365 8097 4.640771 AATAGAAAGAACTGGAGGTGCA 57.359 40.909 0.00 0.00 0.00 4.57
5366 8098 4.640771 ATAGAAAGAACTGGAGGTGCAA 57.359 40.909 0.00 0.00 0.00 4.08
5367 8099 2.856222 AGAAAGAACTGGAGGTGCAAG 58.144 47.619 0.00 0.00 0.00 4.01
5368 8100 1.882623 GAAAGAACTGGAGGTGCAAGG 59.117 52.381 0.00 0.00 0.00 3.61
5369 8101 0.846693 AAGAACTGGAGGTGCAAGGT 59.153 50.000 0.00 0.00 0.00 3.50
5370 8102 0.846693 AGAACTGGAGGTGCAAGGTT 59.153 50.000 0.00 0.00 0.00 3.50
5371 8103 1.202818 AGAACTGGAGGTGCAAGGTTC 60.203 52.381 0.00 0.00 34.95 3.62
5372 8104 0.846693 AACTGGAGGTGCAAGGTTCT 59.153 50.000 0.00 0.00 0.00 3.01
5373 8105 1.729586 ACTGGAGGTGCAAGGTTCTA 58.270 50.000 0.00 0.00 0.00 2.10
5374 8106 2.054799 ACTGGAGGTGCAAGGTTCTAA 58.945 47.619 0.00 0.00 0.00 2.10
5392 8124 7.066374 GTTCTAACCACATTCAGTCATTCTC 57.934 40.000 0.00 0.00 0.00 2.87
5401 8133 7.551974 CCACATTCAGTCATTCTCTAATCACTT 59.448 37.037 0.00 0.00 21.02 3.16
5402 8134 8.388853 CACATTCAGTCATTCTCTAATCACTTG 58.611 37.037 0.00 0.00 21.02 3.16
5404 8136 6.857437 TCAGTCATTCTCTAATCACTTGGA 57.143 37.500 0.00 0.00 21.02 3.53
5405 8137 7.244886 TCAGTCATTCTCTAATCACTTGGAA 57.755 36.000 0.00 0.00 21.02 3.53
5406 8138 7.326454 TCAGTCATTCTCTAATCACTTGGAAG 58.674 38.462 0.00 0.00 21.02 3.46
5407 8139 7.179160 TCAGTCATTCTCTAATCACTTGGAAGA 59.821 37.037 0.00 0.00 21.02 2.87
5408 8140 7.492020 CAGTCATTCTCTAATCACTTGGAAGAG 59.508 40.741 0.00 0.00 35.97 2.85
5412 8144 6.287589 TCTCTAATCACTTGGAAGAGAACC 57.712 41.667 0.00 0.00 39.67 3.62
5413 8145 5.780282 TCTCTAATCACTTGGAAGAGAACCA 59.220 40.000 0.00 0.00 39.67 3.67
5416 8148 4.550076 ATCACTTGGAAGAGAACCAGAG 57.450 45.455 0.00 0.00 38.70 3.35
5417 8149 2.634940 TCACTTGGAAGAGAACCAGAGG 59.365 50.000 0.00 0.00 38.70 3.69
5418 8150 2.634940 CACTTGGAAGAGAACCAGAGGA 59.365 50.000 0.00 0.00 38.70 3.71
5420 8152 1.944177 TGGAAGAGAACCAGAGGAGG 58.056 55.000 0.00 0.00 33.22 4.30
5421 8153 1.433199 TGGAAGAGAACCAGAGGAGGA 59.567 52.381 0.00 0.00 33.22 3.71
5423 8155 2.698274 GGAAGAGAACCAGAGGAGGATC 59.302 54.545 0.00 0.00 0.00 3.36
5424 8156 2.065899 AGAGAACCAGAGGAGGATCG 57.934 55.000 0.00 0.00 35.77 3.69
5425 8157 1.566703 AGAGAACCAGAGGAGGATCGA 59.433 52.381 0.00 0.00 35.77 3.59
5426 8158 2.024846 AGAGAACCAGAGGAGGATCGAA 60.025 50.000 0.00 0.00 35.77 3.71
5427 8159 2.100087 GAGAACCAGAGGAGGATCGAAC 59.900 54.545 0.00 0.00 35.77 3.95
5429 8161 1.770294 ACCAGAGGAGGATCGAACTC 58.230 55.000 10.97 10.97 34.37 3.01
5431 8163 2.291930 ACCAGAGGAGGATCGAACTCTT 60.292 50.000 16.86 11.43 38.18 2.85
5432 8164 3.053544 ACCAGAGGAGGATCGAACTCTTA 60.054 47.826 16.86 0.00 38.18 2.10
5433 8165 3.316868 CCAGAGGAGGATCGAACTCTTAC 59.683 52.174 16.86 10.31 38.18 2.34
5435 8167 5.369833 CAGAGGAGGATCGAACTCTTACTA 58.630 45.833 16.86 0.00 38.18 1.82
5438 8170 5.507637 AGGAGGATCGAACTCTTACTACAA 58.492 41.667 16.86 0.00 35.34 2.41
5449 9488 7.437267 CGAACTCTTACTACAAAACTTGGAAGA 59.563 37.037 0.00 0.00 34.12 2.87
5453 9492 8.306680 TCTTACTACAAAACTTGGAAGATTCG 57.693 34.615 0.00 0.00 34.12 3.34
5454 9493 8.145767 TCTTACTACAAAACTTGGAAGATTCGA 58.854 33.333 0.00 0.00 34.12 3.71
5458 9497 6.787085 ACAAAACTTGGAAGATTCGAGTAG 57.213 37.500 0.00 0.00 34.12 2.57
5459 9498 6.522054 ACAAAACTTGGAAGATTCGAGTAGA 58.478 36.000 0.00 0.00 34.12 2.59
5460 9499 7.162082 ACAAAACTTGGAAGATTCGAGTAGAT 58.838 34.615 0.00 0.00 34.12 1.98
5462 9501 6.531503 AACTTGGAAGATTCGAGTAGATGA 57.468 37.500 0.00 0.00 0.00 2.92
5463 9502 6.142818 ACTTGGAAGATTCGAGTAGATGAG 57.857 41.667 0.00 0.00 0.00 2.90
5464 9503 5.888724 ACTTGGAAGATTCGAGTAGATGAGA 59.111 40.000 0.00 0.00 0.00 3.27
5466 9505 6.137794 TGGAAGATTCGAGTAGATGAGAAC 57.862 41.667 0.00 0.00 0.00 3.01
5469 9508 7.227711 TGGAAGATTCGAGTAGATGAGAACTAG 59.772 40.741 0.00 0.00 0.00 2.57
5470 9509 7.308348 GGAAGATTCGAGTAGATGAGAACTAGG 60.308 44.444 0.00 0.00 0.00 3.02
5538 9662 4.434330 GGCGATGTATTTCGTAGCTATTGC 60.434 45.833 0.00 0.00 41.16 3.56
5623 9757 2.967887 ACCAAAAGCAGCTCAAATCCTT 59.032 40.909 0.00 0.00 0.00 3.36
5626 9760 5.246883 ACCAAAAGCAGCTCAAATCCTTTAT 59.753 36.000 0.00 0.00 0.00 1.40
5673 10052 9.651913 GAGAGAAATCAGGGATCATAGAAATAC 57.348 37.037 0.00 0.00 0.00 1.89
5674 10053 9.163894 AGAGAAATCAGGGATCATAGAAATACA 57.836 33.333 0.00 0.00 0.00 2.29
5675 10054 9.784531 GAGAAATCAGGGATCATAGAAATACAA 57.215 33.333 0.00 0.00 0.00 2.41
5704 10083 8.752766 ATGAAGCTTGTAATTTTGAAGTCATG 57.247 30.769 2.10 0.00 0.00 3.07
5730 10109 6.260714 TGAATATAACAGCGCAAATCATGACT 59.739 34.615 11.47 0.00 0.00 3.41
5761 10140 5.275067 TGTTCAAGAAGGAAAATGTTGGG 57.725 39.130 0.00 0.00 0.00 4.12
5785 10164 7.255277 GGGCAACTTATGAAGGATATTCTGAAC 60.255 40.741 0.00 0.00 0.00 3.18
5796 10175 7.264294 AGGATATTCTGAACTCTGAAACCTT 57.736 36.000 3.53 0.00 37.36 3.50
5820 10199 8.589701 TTTCTAAGAATTTGGGGAGGTTTATC 57.410 34.615 0.00 0.00 0.00 1.75
5888 10281 3.765381 TCAAAGATCAAGCCATTCCACA 58.235 40.909 0.00 0.00 0.00 4.17
5902 10295 5.336690 GCCATTCCACAGCTTTTTCAATCTA 60.337 40.000 0.00 0.00 0.00 1.98
5905 10298 7.116805 CCATTCCACAGCTTTTTCAATCTAAAC 59.883 37.037 0.00 0.00 0.00 2.01
5977 10383 6.639279 ACATTTGACCGTGCATAAACTTTAAC 59.361 34.615 0.00 0.00 0.00 2.01
5978 10384 6.380095 TTTGACCGTGCATAAACTTTAACT 57.620 33.333 0.00 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
387 645 7.581011 AAAACATGTCTGTGTTGAGAAAAAC 57.419 32.000 0.00 0.00 41.22 2.43
415 673 9.559732 TCATTCATATCGGTCTTGAAAATGTAT 57.440 29.630 0.00 0.00 33.45 2.29
416 674 8.956533 TCATTCATATCGGTCTTGAAAATGTA 57.043 30.769 0.00 0.00 33.45 2.29
420 678 8.836413 GGTAATCATTCATATCGGTCTTGAAAA 58.164 33.333 0.00 0.00 33.45 2.29
421 679 7.990314 TGGTAATCATTCATATCGGTCTTGAAA 59.010 33.333 0.00 0.00 33.45 2.69
422 680 7.505258 TGGTAATCATTCATATCGGTCTTGAA 58.495 34.615 0.00 0.00 34.18 2.69
423 681 7.061566 TGGTAATCATTCATATCGGTCTTGA 57.938 36.000 0.00 0.00 0.00 3.02
425 683 5.934625 GCTGGTAATCATTCATATCGGTCTT 59.065 40.000 0.00 0.00 0.00 3.01
426 684 5.012046 TGCTGGTAATCATTCATATCGGTCT 59.988 40.000 0.00 0.00 0.00 3.85
472 737 4.954092 AATGGCGATTGAGAGAGAAAAC 57.046 40.909 0.00 0.00 0.00 2.43
500 765 3.243975 ACATTTGCAAAGAAGCTCCAAGG 60.244 43.478 18.19 0.00 34.99 3.61
1245 1821 7.812669 AGCTACAAAACTTATTAACAATGGCAC 59.187 33.333 0.00 0.00 0.00 5.01
1396 1975 8.816640 ATTAACAAAAGCTTCACAATGGTAAG 57.183 30.769 0.00 0.00 0.00 2.34
1518 2097 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
1547 2126 8.807118 TCCACATGTAGTCCATATTAGAATCTC 58.193 37.037 0.00 0.00 30.71 2.75
1549 2128 9.376075 CATCCACATGTAGTCCATATTAGAATC 57.624 37.037 0.00 0.00 30.71 2.52
1550 2129 8.884323 ACATCCACATGTAGTCCATATTAGAAT 58.116 33.333 0.00 0.00 41.81 2.40
1551 2130 8.262601 ACATCCACATGTAGTCCATATTAGAA 57.737 34.615 0.00 0.00 41.81 2.10
1553 2132 9.591792 CATACATCCACATGTAGTCCATATTAG 57.408 37.037 0.00 0.00 46.52 1.73
1554 2133 9.100197 ACATACATCCACATGTAGTCCATATTA 57.900 33.333 0.00 0.00 46.52 0.98
1556 2135 7.559335 ACATACATCCACATGTAGTCCATAT 57.441 36.000 0.00 0.00 46.52 1.78
1557 2136 6.994421 ACATACATCCACATGTAGTCCATA 57.006 37.500 0.00 0.00 46.52 2.74
1558 2137 5.894298 ACATACATCCACATGTAGTCCAT 57.106 39.130 0.00 0.00 46.52 3.41
1559 2138 6.800072 TTACATACATCCACATGTAGTCCA 57.200 37.500 0.00 0.00 46.52 4.02
1561 2140 8.662781 ATGTTTACATACATCCACATGTAGTC 57.337 34.615 0.00 0.00 46.52 2.59
1590 2169 9.453572 AGCAAAATGAATGAATCTACACTCTAA 57.546 29.630 0.00 0.00 0.00 2.10
1591 2170 9.453572 AAGCAAAATGAATGAATCTACACTCTA 57.546 29.630 0.00 0.00 0.00 2.43
1595 2174 7.023575 ACGAAGCAAAATGAATGAATCTACAC 58.976 34.615 0.00 0.00 0.00 2.90
1597 2176 9.162793 CATACGAAGCAAAATGAATGAATCTAC 57.837 33.333 0.00 0.00 0.00 2.59
1598 2177 8.892723 ACATACGAAGCAAAATGAATGAATCTA 58.107 29.630 0.00 0.00 0.00 1.98
1601 2180 8.677300 ACTACATACGAAGCAAAATGAATGAAT 58.323 29.630 0.00 0.00 0.00 2.57
1602 2181 8.039603 ACTACATACGAAGCAAAATGAATGAA 57.960 30.769 0.00 0.00 0.00 2.57
1603 2182 7.609760 ACTACATACGAAGCAAAATGAATGA 57.390 32.000 0.00 0.00 0.00 2.57
1604 2183 8.673626 AAACTACATACGAAGCAAAATGAATG 57.326 30.769 0.00 0.00 0.00 2.67
1645 2224 9.350951 CCCTCCGTTCCTAAATATAAATCTTTT 57.649 33.333 0.00 0.00 0.00 2.27
1646 2225 8.720537 TCCCTCCGTTCCTAAATATAAATCTTT 58.279 33.333 0.00 0.00 0.00 2.52
1647 2226 8.271398 TCCCTCCGTTCCTAAATATAAATCTT 57.729 34.615 0.00 0.00 0.00 2.40
1650 2229 7.628501 ACTCCCTCCGTTCCTAAATATAAAT 57.371 36.000 0.00 0.00 0.00 1.40
1651 2230 8.551682 TTACTCCCTCCGTTCCTAAATATAAA 57.448 34.615 0.00 0.00 0.00 1.40
1654 2233 8.912614 ATATTACTCCCTCCGTTCCTAAATAT 57.087 34.615 0.00 0.00 0.00 1.28
1655 2234 8.731591 AATATTACTCCCTCCGTTCCTAAATA 57.268 34.615 0.00 0.00 0.00 1.40
1656 2235 7.628501 AATATTACTCCCTCCGTTCCTAAAT 57.371 36.000 0.00 0.00 0.00 1.40
1657 2236 7.441903 AAATATTACTCCCTCCGTTCCTAAA 57.558 36.000 0.00 0.00 0.00 1.85
1660 2239 5.970501 AAAATATTACTCCCTCCGTTCCT 57.029 39.130 0.00 0.00 0.00 3.36
1661 2240 6.354938 AGAAAAATATTACTCCCTCCGTTCC 58.645 40.000 0.00 0.00 0.00 3.62
1662 2241 7.860918 AAGAAAAATATTACTCCCTCCGTTC 57.139 36.000 0.00 0.00 0.00 3.95
1664 2243 8.645814 AAAAAGAAAAATATTACTCCCTCCGT 57.354 30.769 0.00 0.00 0.00 4.69
1862 2444 7.257722 TCTTGAGGTTTAAAGTTCTTTTGCTG 58.742 34.615 3.12 0.00 0.00 4.41
1880 2462 4.633126 ACAATGTTGATCGTCATCTTGAGG 59.367 41.667 0.00 0.00 33.88 3.86
1929 2513 3.002791 AGTTCACGATGAAACGATGCAT 58.997 40.909 0.00 0.00 38.22 3.96
1935 2519 7.830217 TTAATCAAAAGTTCACGATGAAACG 57.170 32.000 0.00 0.00 38.22 3.60
2237 2823 5.221561 CGGTGGATGACTGTATTACCCATAA 60.222 44.000 0.00 0.00 0.00 1.90
2296 2882 6.257411 CGAAACAGCAGTGAATCATTCTCTAT 59.743 38.462 1.61 0.00 32.67 1.98
2297 2883 5.578336 CGAAACAGCAGTGAATCATTCTCTA 59.422 40.000 1.61 0.00 32.67 2.43
2311 2897 2.802247 TCTCAATGTGACGAAACAGCAG 59.198 45.455 0.00 0.00 32.52 4.24
2408 2994 5.471456 ACACCTCTTTCTTCAGCATTACAAG 59.529 40.000 0.00 0.00 0.00 3.16
2410 2996 4.756642 CACACCTCTTTCTTCAGCATTACA 59.243 41.667 0.00 0.00 0.00 2.41
2417 3003 4.694509 CAGAATCCACACCTCTTTCTTCAG 59.305 45.833 0.00 0.00 0.00 3.02
2432 3018 8.980596 AGCCATTTGAAATATTAACAGAATCCA 58.019 29.630 0.00 0.00 0.00 3.41
2455 3041 1.148273 TGGCATTATCACGGGAGCC 59.852 57.895 8.66 8.66 42.32 4.70
2467 3053 3.657398 TCCTGATGATCTTGTGGCATT 57.343 42.857 0.00 0.00 0.00 3.56
2673 3261 7.178451 TGTCTTCTCCTGTACATAATCTCAACA 59.822 37.037 0.00 0.00 0.00 3.33
2762 3350 9.643693 CAGGAAGTAATGTTAATGCAGAAAAAT 57.356 29.630 0.00 0.00 0.00 1.82
2763 3351 8.855110 TCAGGAAGTAATGTTAATGCAGAAAAA 58.145 29.630 0.00 0.00 0.00 1.94
3066 3657 3.887716 GTGGCCATCATCTAGCTCAAAAT 59.112 43.478 9.72 0.00 0.00 1.82
3271 3862 3.878778 ACAAGAGCAGAAGTTTGTGACT 58.121 40.909 0.00 0.00 41.47 3.41
3272 3863 5.237344 ACATACAAGAGCAGAAGTTTGTGAC 59.763 40.000 0.00 0.00 35.55 3.67
3273 3864 5.368145 ACATACAAGAGCAGAAGTTTGTGA 58.632 37.500 0.00 0.00 35.55 3.58
3274 3865 5.679734 ACATACAAGAGCAGAAGTTTGTG 57.320 39.130 0.00 0.00 35.55 3.33
3275 3866 6.699575 AAACATACAAGAGCAGAAGTTTGT 57.300 33.333 0.00 0.00 37.51 2.83
3276 3867 8.345565 AGTAAAACATACAAGAGCAGAAGTTTG 58.654 33.333 0.00 0.00 0.00 2.93
3277 3868 8.345565 CAGTAAAACATACAAGAGCAGAAGTTT 58.654 33.333 0.00 0.00 0.00 2.66
3278 3869 7.499232 ACAGTAAAACATACAAGAGCAGAAGTT 59.501 33.333 0.00 0.00 0.00 2.66
3279 3870 6.992715 ACAGTAAAACATACAAGAGCAGAAGT 59.007 34.615 0.00 0.00 0.00 3.01
3280 3871 7.360438 GGACAGTAAAACATACAAGAGCAGAAG 60.360 40.741 0.00 0.00 0.00 2.85
3281 3872 6.426937 GGACAGTAAAACATACAAGAGCAGAA 59.573 38.462 0.00 0.00 0.00 3.02
3282 3873 5.932303 GGACAGTAAAACATACAAGAGCAGA 59.068 40.000 0.00 0.00 0.00 4.26
3283 3874 5.934625 AGGACAGTAAAACATACAAGAGCAG 59.065 40.000 0.00 0.00 0.00 4.24
3284 3875 5.865085 AGGACAGTAAAACATACAAGAGCA 58.135 37.500 0.00 0.00 0.00 4.26
3285 3876 6.166982 AGAGGACAGTAAAACATACAAGAGC 58.833 40.000 0.00 0.00 0.00 4.09
3286 3877 8.608844 AAAGAGGACAGTAAAACATACAAGAG 57.391 34.615 0.00 0.00 0.00 2.85
3287 3878 8.836413 CAAAAGAGGACAGTAAAACATACAAGA 58.164 33.333 0.00 0.00 0.00 3.02
3288 3879 7.591426 GCAAAAGAGGACAGTAAAACATACAAG 59.409 37.037 0.00 0.00 0.00 3.16
3289 3880 7.422399 GCAAAAGAGGACAGTAAAACATACAA 58.578 34.615 0.00 0.00 0.00 2.41
3290 3881 6.016610 GGCAAAAGAGGACAGTAAAACATACA 60.017 38.462 0.00 0.00 0.00 2.29
3291 3882 6.016610 TGGCAAAAGAGGACAGTAAAACATAC 60.017 38.462 0.00 0.00 0.00 2.39
3292 3883 6.065374 TGGCAAAAGAGGACAGTAAAACATA 58.935 36.000 0.00 0.00 0.00 2.29
3293 3884 4.892934 TGGCAAAAGAGGACAGTAAAACAT 59.107 37.500 0.00 0.00 0.00 2.71
3294 3885 4.274147 TGGCAAAAGAGGACAGTAAAACA 58.726 39.130 0.00 0.00 0.00 2.83
3295 3886 4.911514 TGGCAAAAGAGGACAGTAAAAC 57.088 40.909 0.00 0.00 0.00 2.43
3296 3887 5.420739 ACTTTGGCAAAAGAGGACAGTAAAA 59.579 36.000 20.65 0.00 44.81 1.52
3297 3888 4.953579 ACTTTGGCAAAAGAGGACAGTAAA 59.046 37.500 20.65 0.00 44.81 2.01
3298 3889 4.532834 ACTTTGGCAAAAGAGGACAGTAA 58.467 39.130 20.65 0.00 44.81 2.24
3299 3890 4.164843 ACTTTGGCAAAAGAGGACAGTA 57.835 40.909 20.65 0.00 44.81 2.74
3300 3891 3.018423 ACTTTGGCAAAAGAGGACAGT 57.982 42.857 20.65 2.58 44.81 3.55
3301 3892 3.131046 ACAACTTTGGCAAAAGAGGACAG 59.869 43.478 20.65 1.91 44.81 3.51
3302 3893 3.096092 ACAACTTTGGCAAAAGAGGACA 58.904 40.909 20.65 0.00 44.81 4.02
3303 3894 3.706698 GACAACTTTGGCAAAAGAGGAC 58.293 45.455 20.65 8.01 44.81 3.85
3304 3895 2.357637 CGACAACTTTGGCAAAAGAGGA 59.642 45.455 20.65 0.00 44.81 3.71
3305 3896 2.099098 ACGACAACTTTGGCAAAAGAGG 59.901 45.455 20.65 13.06 44.81 3.69
3651 4369 5.376854 AAATGTGATGCTAGTTCCAACAC 57.623 39.130 0.00 0.00 36.77 3.32
3688 4410 7.313740 AGTTGACTGCATATCCTAGATCATT 57.686 36.000 0.00 0.00 0.00 2.57
3692 4414 7.847711 AGTAAGTTGACTGCATATCCTAGAT 57.152 36.000 0.00 0.00 0.00 1.98
3783 4505 3.386078 TGGGATCAGTTCATACAGAGAGC 59.614 47.826 0.00 0.00 0.00 4.09
3872 4594 6.237901 AGATGGTAAGTGTTCAACTGCATAA 58.762 36.000 0.00 0.00 39.81 1.90
3926 4648 1.871772 CCACTTCTTGCTCTTGCCG 59.128 57.895 0.00 0.00 38.71 5.69
3957 4679 5.422970 ACCCGTGTGTATCTTTCCTAATGTA 59.577 40.000 0.00 0.00 0.00 2.29
3973 4695 0.250727 ACAAAGGATGGACCCGTGTG 60.251 55.000 0.00 0.00 40.05 3.82
4010 4732 0.316689 CTCGGGTGTCGCAAACAAAC 60.317 55.000 0.00 0.00 40.31 2.93
4017 4739 2.632544 CCTGTACTCGGGTGTCGCA 61.633 63.158 0.00 0.00 39.05 5.10
4025 4747 2.359981 TATCTCCCACCTGTACTCGG 57.640 55.000 0.00 0.00 0.00 4.63
4209 6849 4.835284 TGGTTCTACCATCAGTTATGCA 57.165 40.909 0.00 0.00 44.79 3.96
4380 7020 2.114670 CCATGGCTGCGAACCGAAT 61.115 57.895 0.00 0.00 0.00 3.34
4429 7069 2.408050 CGAGGGCCTCTTGATTTATCG 58.592 52.381 29.81 10.88 0.00 2.92
4430 7070 2.368875 TCCGAGGGCCTCTTGATTTATC 59.631 50.000 29.81 1.86 0.00 1.75
4438 7078 2.168666 GACGTTTCCGAGGGCCTCTT 62.169 60.000 29.81 6.29 37.88 2.85
4444 7084 1.514553 GTAGGGACGTTTCCGAGGG 59.485 63.158 0.00 0.00 43.94 4.30
4463 7103 4.155462 CAGGCATGCAGTGGATGATATTAC 59.845 45.833 26.87 8.72 0.00 1.89
4526 7166 2.028385 TCGGAACTTTAGACTGAAGGGC 60.028 50.000 11.33 3.08 0.00 5.19
4537 7177 4.793071 TCGACACGTAAATCGGAACTTTA 58.207 39.130 13.93 0.00 44.69 1.85
4538 7178 3.641648 TCGACACGTAAATCGGAACTTT 58.358 40.909 13.93 0.00 44.69 2.66
4540 7180 2.995466 TCGACACGTAAATCGGAACT 57.005 45.000 13.93 0.00 44.69 3.01
4546 7186 7.891782 TCTTGTTCATTATCGACACGTAAATC 58.108 34.615 0.00 0.00 0.00 2.17
4552 7192 3.612423 TGCTCTTGTTCATTATCGACACG 59.388 43.478 0.00 0.00 0.00 4.49
4554 7194 4.627035 CACTGCTCTTGTTCATTATCGACA 59.373 41.667 0.00 0.00 0.00 4.35
4558 7198 5.634896 CCAACACTGCTCTTGTTCATTATC 58.365 41.667 0.00 0.00 34.91 1.75
4559 7199 4.082571 GCCAACACTGCTCTTGTTCATTAT 60.083 41.667 0.00 0.00 34.91 1.28
4604 7247 0.371645 GCTCAGAAAAGATGCCGACG 59.628 55.000 0.00 0.00 0.00 5.12
4609 7252 2.556534 AATGCGCTCAGAAAAGATGC 57.443 45.000 9.73 0.00 0.00 3.91
4610 7253 4.087510 TGAAATGCGCTCAGAAAAGATG 57.912 40.909 9.73 0.00 0.00 2.90
4615 7262 1.198408 CAGCTGAAATGCGCTCAGAAA 59.802 47.619 24.54 0.00 42.51 2.52
4620 7267 0.518636 TTGACAGCTGAAATGCGCTC 59.481 50.000 23.35 5.14 38.13 5.03
4621 7268 1.131883 GATTGACAGCTGAAATGCGCT 59.868 47.619 23.35 0.00 38.13 5.92
4622 7269 1.135603 TGATTGACAGCTGAAATGCGC 60.136 47.619 23.35 0.00 38.13 6.09
4624 7271 4.634184 ATCTGATTGACAGCTGAAATGC 57.366 40.909 23.35 13.00 45.38 3.56
4652 7299 9.459640 TCAAGAATACATACAGCGAATAACTAC 57.540 33.333 0.00 0.00 0.00 2.73
4655 7302 8.062448 GGTTCAAGAATACATACAGCGAATAAC 58.938 37.037 0.00 0.00 0.00 1.89
4657 7304 7.438160 CAGGTTCAAGAATACATACAGCGAATA 59.562 37.037 0.00 0.00 0.00 1.75
4661 7308 4.271049 CCAGGTTCAAGAATACATACAGCG 59.729 45.833 0.00 0.00 0.00 5.18
4662 7309 5.186198 ACCAGGTTCAAGAATACATACAGC 58.814 41.667 0.00 0.00 0.00 4.40
4663 7310 8.830580 CATTACCAGGTTCAAGAATACATACAG 58.169 37.037 0.00 0.00 0.00 2.74
4664 7311 8.325787 ACATTACCAGGTTCAAGAATACATACA 58.674 33.333 0.00 0.00 0.00 2.29
4665 7312 8.732746 ACATTACCAGGTTCAAGAATACATAC 57.267 34.615 0.00 0.00 0.00 2.39
4666 7313 9.747898 AAACATTACCAGGTTCAAGAATACATA 57.252 29.630 0.00 0.00 0.00 2.29
4667 7314 8.650143 AAACATTACCAGGTTCAAGAATACAT 57.350 30.769 0.00 0.00 0.00 2.29
4677 7324 4.095036 GCTAGCTGAAACATTACCAGGTTC 59.905 45.833 7.70 0.00 39.14 3.62
4699 7346 1.541147 TGTTGCATTAAGACAGCAGGC 59.459 47.619 0.00 0.00 39.72 4.85
4704 7351 6.919662 AGACACAAAATGTTGCATTAAGACAG 59.080 34.615 0.00 0.00 43.56 3.51
4708 7355 6.215121 TCCAGACACAAAATGTTGCATTAAG 58.785 36.000 0.00 0.00 43.56 1.85
4728 7375 3.553508 CCCTGCAAATGTTCTGTTTCCAG 60.554 47.826 0.00 0.00 40.25 3.86
4729 7376 2.364970 CCCTGCAAATGTTCTGTTTCCA 59.635 45.455 0.00 0.00 0.00 3.53
4730 7377 2.627699 TCCCTGCAAATGTTCTGTTTCC 59.372 45.455 0.00 0.00 0.00 3.13
4731 7378 3.319122 ACTCCCTGCAAATGTTCTGTTTC 59.681 43.478 0.00 0.00 0.00 2.78
4732 7379 3.299503 ACTCCCTGCAAATGTTCTGTTT 58.700 40.909 0.00 0.00 0.00 2.83
4739 7386 2.372264 CAGCATACTCCCTGCAAATGT 58.628 47.619 0.00 0.00 42.15 2.71
4750 7397 3.820689 CGAGATACTCAGCAGCATACTC 58.179 50.000 0.00 0.00 0.00 2.59
4781 7428 1.531840 ACGAGGGTCACAGTCTGCT 60.532 57.895 0.00 0.00 0.00 4.24
4794 7441 1.226802 CATCTCTGCCGTCACGAGG 60.227 63.158 0.00 0.00 0.00 4.63
4798 7445 0.390340 TTGCTCATCTCTGCCGTCAC 60.390 55.000 0.00 0.00 0.00 3.67
4802 7449 2.178890 GCCTTGCTCATCTCTGCCG 61.179 63.158 0.00 0.00 0.00 5.69
4811 7458 0.322816 GACTTCCCATGCCTTGCTCA 60.323 55.000 0.00 0.00 0.00 4.26
4819 7466 0.895100 TGCACCTTGACTTCCCATGC 60.895 55.000 0.00 0.00 0.00 4.06
4842 7489 2.556287 GTGAGAACCTTTGCGCGG 59.444 61.111 8.83 0.00 0.00 6.46
4843 7490 2.170985 CGTGAGAACCTTTGCGCG 59.829 61.111 0.00 0.00 0.00 6.86
4848 7504 2.224305 CCAACCTCTCGTGAGAACCTTT 60.224 50.000 15.85 0.00 42.73 3.11
4852 7508 0.033504 TGCCAACCTCTCGTGAGAAC 59.966 55.000 15.85 1.55 42.73 3.01
4854 7510 1.112916 TGTGCCAACCTCTCGTGAGA 61.113 55.000 15.85 0.00 42.73 3.27
4859 7515 1.002468 CAAACTTGTGCCAACCTCTCG 60.002 52.381 0.00 0.00 0.00 4.04
4861 7517 0.746659 GCAAACTTGTGCCAACCTCT 59.253 50.000 0.00 0.00 38.66 3.69
4871 7527 1.658686 TTTGTCGCGGGCAAACTTGT 61.659 50.000 20.04 0.00 31.74 3.16
4873 7529 3.515611 TTTGTCGCGGGCAAACTT 58.484 50.000 20.04 0.00 31.74 2.66
4883 7539 1.002792 GGACTTTCAGGTGTTTGTCGC 60.003 52.381 0.00 0.00 0.00 5.19
4890 7546 3.392616 AGATGTCTTGGACTTTCAGGTGT 59.607 43.478 0.00 0.00 33.15 4.16
4893 7549 2.746362 GCAGATGTCTTGGACTTTCAGG 59.254 50.000 0.00 0.00 33.15 3.86
4900 7556 2.079925 GAACAGGCAGATGTCTTGGAC 58.920 52.381 0.00 0.00 31.50 4.02
4903 7559 2.189594 TGGAACAGGCAGATGTCTTG 57.810 50.000 0.00 0.00 31.50 3.02
4927 7583 1.722034 AGCTTCCTCTGGTCTGTCAA 58.278 50.000 0.00 0.00 0.00 3.18
4932 7588 2.327325 TGGTAAGCTTCCTCTGGTCT 57.673 50.000 0.00 0.00 0.00 3.85
4975 7631 7.361286 GGAAAGCTAAAACTACTGGTTCTCATG 60.361 40.741 0.00 0.00 37.12 3.07
4983 7639 4.072131 TGCTGGAAAGCTAAAACTACTGG 58.928 43.478 0.00 0.00 35.49 4.00
4985 7641 4.714632 TGTGCTGGAAAGCTAAAACTACT 58.285 39.130 0.00 0.00 35.49 2.57
4986 7642 5.181245 TCATGTGCTGGAAAGCTAAAACTAC 59.819 40.000 0.00 0.00 35.49 2.73
4995 7651 1.467734 CACTCTCATGTGCTGGAAAGC 59.532 52.381 0.00 0.00 0.00 3.51
5018 7674 1.817099 GCCGAACAGCCATCAGAGG 60.817 63.158 0.00 0.00 0.00 3.69
5034 7690 2.030274 AGAAACACGCAAAATACCAGCC 60.030 45.455 0.00 0.00 0.00 4.85
5047 7703 7.921214 ACATGGTCTATAGATTACAGAAACACG 59.079 37.037 5.57 0.00 0.00 4.49
5069 7736 1.896220 AGTAGCCACACAACCACATG 58.104 50.000 0.00 0.00 0.00 3.21
5070 7737 2.656947 AAGTAGCCACACAACCACAT 57.343 45.000 0.00 0.00 0.00 3.21
5077 7744 3.838244 ACTTCTGAAAGTAGCCACACA 57.162 42.857 0.00 0.00 43.98 3.72
5092 7759 4.760204 CCAATTGGTTTCTCCGTTACTTCT 59.240 41.667 16.90 0.00 39.52 2.85
5093 7760 4.758165 TCCAATTGGTTTCTCCGTTACTTC 59.242 41.667 23.76 0.00 39.52 3.01
5096 7763 5.638596 ATTCCAATTGGTTTCTCCGTTAC 57.361 39.130 23.76 0.00 39.52 2.50
5100 7767 4.220602 AGGAAATTCCAATTGGTTTCTCCG 59.779 41.667 27.04 4.64 39.61 4.63
5114 7781 9.356433 GCTACTACGATTCTAATAGGAAATTCC 57.644 37.037 3.29 3.29 36.58 3.01
5116 7783 9.915629 CAGCTACTACGATTCTAATAGGAAATT 57.084 33.333 0.00 0.00 0.00 1.82
5119 7786 6.433404 CCCAGCTACTACGATTCTAATAGGAA 59.567 42.308 0.00 0.00 0.00 3.36
5122 7789 6.821031 ACCCAGCTACTACGATTCTAATAG 57.179 41.667 0.00 0.00 0.00 1.73
5124 7791 7.778185 ATTACCCAGCTACTACGATTCTAAT 57.222 36.000 0.00 0.00 0.00 1.73
5125 7792 7.286087 TGAATTACCCAGCTACTACGATTCTAA 59.714 37.037 0.00 0.00 0.00 2.10
5126 7793 6.774170 TGAATTACCCAGCTACTACGATTCTA 59.226 38.462 0.00 0.00 0.00 2.10
5128 7795 5.839621 TGAATTACCCAGCTACTACGATTC 58.160 41.667 0.00 0.00 0.00 2.52
5129 7796 5.221461 CCTGAATTACCCAGCTACTACGATT 60.221 44.000 0.00 0.00 0.00 3.34
5132 7799 3.243771 CCCTGAATTACCCAGCTACTACG 60.244 52.174 0.00 0.00 0.00 3.51
5134 7801 4.223953 CTCCCTGAATTACCCAGCTACTA 58.776 47.826 0.00 0.00 0.00 1.82
5137 7804 3.130734 ACTCCCTGAATTACCCAGCTA 57.869 47.619 0.00 0.00 0.00 3.32
5138 7805 1.972588 ACTCCCTGAATTACCCAGCT 58.027 50.000 0.00 0.00 0.00 4.24
5141 7808 5.285401 TCAGATAACTCCCTGAATTACCCA 58.715 41.667 0.00 0.00 36.58 4.51
5142 7809 5.888982 TCAGATAACTCCCTGAATTACCC 57.111 43.478 0.00 0.00 36.58 3.69
5143 7810 6.831976 ACATCAGATAACTCCCTGAATTACC 58.168 40.000 0.00 0.00 42.02 2.85
5144 7811 9.482627 CTAACATCAGATAACTCCCTGAATTAC 57.517 37.037 0.00 0.00 42.02 1.89
5146 7813 7.512992 CCTAACATCAGATAACTCCCTGAATT 58.487 38.462 0.00 0.00 42.02 2.17
5163 7832 2.504175 TCCAGTAACCCAGCCTAACATC 59.496 50.000 0.00 0.00 0.00 3.06
5166 7835 2.483188 CGATCCAGTAACCCAGCCTAAC 60.483 54.545 0.00 0.00 0.00 2.34
5172 7841 3.819564 TTCATCGATCCAGTAACCCAG 57.180 47.619 0.00 0.00 0.00 4.45
5180 7849 6.780944 GAAAACGATTTTTCATCGATCCAG 57.219 37.500 11.04 0.00 46.84 3.86
5191 7860 6.567891 GCCACAGCTAGTAGAAAACGATTTTT 60.568 38.462 0.00 0.00 35.18 1.94
5194 7863 3.933332 GCCACAGCTAGTAGAAAACGATT 59.067 43.478 0.00 0.00 35.50 3.34
5209 7878 1.064654 GCAATAACTAGCAGCCACAGC 59.935 52.381 0.00 0.00 40.32 4.40
5211 7880 2.488204 TGCAATAACTAGCAGCCACA 57.512 45.000 0.00 0.00 35.51 4.17
5212 7881 4.376340 AATTGCAATAACTAGCAGCCAC 57.624 40.909 13.39 0.00 42.39 5.01
5214 7883 4.098501 AGGAAATTGCAATAACTAGCAGCC 59.901 41.667 13.39 4.20 42.39 4.85
5215 7884 5.039333 CAGGAAATTGCAATAACTAGCAGC 58.961 41.667 13.39 0.00 42.39 5.25
5217 7886 6.588719 AACAGGAAATTGCAATAACTAGCA 57.411 33.333 13.39 0.00 39.32 3.49
5218 7887 7.985476 TCTAACAGGAAATTGCAATAACTAGC 58.015 34.615 13.39 0.00 0.00 3.42
5219 7888 9.994432 CTTCTAACAGGAAATTGCAATAACTAG 57.006 33.333 13.39 6.00 0.00 2.57
5220 7889 8.458843 GCTTCTAACAGGAAATTGCAATAACTA 58.541 33.333 13.39 0.00 0.00 2.24
5222 7891 6.531594 GGCTTCTAACAGGAAATTGCAATAAC 59.468 38.462 13.39 9.58 0.00 1.89
5223 7892 6.210385 TGGCTTCTAACAGGAAATTGCAATAA 59.790 34.615 13.39 0.00 0.00 1.40
5224 7893 5.714333 TGGCTTCTAACAGGAAATTGCAATA 59.286 36.000 13.39 0.00 0.00 1.90
5225 7894 4.527816 TGGCTTCTAACAGGAAATTGCAAT 59.472 37.500 5.99 5.99 0.00 3.56
5226 7895 3.894427 TGGCTTCTAACAGGAAATTGCAA 59.106 39.130 0.00 0.00 0.00 4.08
5227 7896 3.495331 TGGCTTCTAACAGGAAATTGCA 58.505 40.909 0.00 0.00 0.00 4.08
5228 7897 4.021981 ACTTGGCTTCTAACAGGAAATTGC 60.022 41.667 0.00 0.00 0.00 3.56
5229 7898 5.712152 ACTTGGCTTCTAACAGGAAATTG 57.288 39.130 0.00 0.00 0.00 2.32
5230 7899 6.323739 TGAAACTTGGCTTCTAACAGGAAATT 59.676 34.615 0.00 0.00 0.00 1.82
5231 7900 5.833131 TGAAACTTGGCTTCTAACAGGAAAT 59.167 36.000 0.00 0.00 0.00 2.17
5232 7901 5.197451 TGAAACTTGGCTTCTAACAGGAAA 58.803 37.500 0.00 0.00 0.00 3.13
5233 7902 4.787551 TGAAACTTGGCTTCTAACAGGAA 58.212 39.130 0.00 0.00 0.00 3.36
5234 7903 4.431416 TGAAACTTGGCTTCTAACAGGA 57.569 40.909 0.00 0.00 0.00 3.86
5235 7904 5.474876 AGAATGAAACTTGGCTTCTAACAGG 59.525 40.000 0.00 0.00 0.00 4.00
5236 7905 6.566197 AGAATGAAACTTGGCTTCTAACAG 57.434 37.500 0.00 0.00 0.00 3.16
5237 7906 6.959639 AAGAATGAAACTTGGCTTCTAACA 57.040 33.333 0.00 0.00 0.00 2.41
5238 7907 7.652727 AGAAAGAATGAAACTTGGCTTCTAAC 58.347 34.615 0.00 0.00 0.00 2.34
5239 7908 7.823745 AGAAAGAATGAAACTTGGCTTCTAA 57.176 32.000 0.00 0.00 0.00 2.10
5240 7909 7.823745 AAGAAAGAATGAAACTTGGCTTCTA 57.176 32.000 0.00 0.00 0.00 2.10
5241 7910 6.721704 AAGAAAGAATGAAACTTGGCTTCT 57.278 33.333 0.00 0.00 0.00 2.85
5242 7911 6.422100 GGAAAGAAAGAATGAAACTTGGCTTC 59.578 38.462 0.00 0.00 0.00 3.86
5243 7912 6.283694 GGAAAGAAAGAATGAAACTTGGCTT 58.716 36.000 0.00 0.00 0.00 4.35
5244 7913 5.221521 GGGAAAGAAAGAATGAAACTTGGCT 60.222 40.000 0.00 0.00 0.00 4.75
5245 7914 4.991056 GGGAAAGAAAGAATGAAACTTGGC 59.009 41.667 0.00 0.00 0.00 4.52
5246 7915 5.305386 AGGGGAAAGAAAGAATGAAACTTGG 59.695 40.000 0.00 0.00 0.00 3.61
5247 7916 6.183360 ACAGGGGAAAGAAAGAATGAAACTTG 60.183 38.462 0.00 0.00 0.00 3.16
5248 7917 5.899547 ACAGGGGAAAGAAAGAATGAAACTT 59.100 36.000 0.00 0.00 0.00 2.66
5249 7918 5.302823 CACAGGGGAAAGAAAGAATGAAACT 59.697 40.000 0.00 0.00 0.00 2.66
5250 7919 5.069119 ACACAGGGGAAAGAAAGAATGAAAC 59.931 40.000 0.00 0.00 0.00 2.78
5251 7920 5.208121 ACACAGGGGAAAGAAAGAATGAAA 58.792 37.500 0.00 0.00 0.00 2.69
5252 7921 4.803452 ACACAGGGGAAAGAAAGAATGAA 58.197 39.130 0.00 0.00 0.00 2.57
5253 7922 4.453480 ACACAGGGGAAAGAAAGAATGA 57.547 40.909 0.00 0.00 0.00 2.57
5254 7923 5.302823 AGAAACACAGGGGAAAGAAAGAATG 59.697 40.000 0.00 0.00 0.00 2.67
5255 7924 5.458595 AGAAACACAGGGGAAAGAAAGAAT 58.541 37.500 0.00 0.00 0.00 2.40
5256 7925 4.867086 AGAAACACAGGGGAAAGAAAGAA 58.133 39.130 0.00 0.00 0.00 2.52
5257 7926 4.519906 AGAAACACAGGGGAAAGAAAGA 57.480 40.909 0.00 0.00 0.00 2.52
5258 7927 9.853177 ATATATAGAAACACAGGGGAAAGAAAG 57.147 33.333 0.00 0.00 0.00 2.62
5259 7928 9.847224 GATATATAGAAACACAGGGGAAAGAAA 57.153 33.333 0.00 0.00 0.00 2.52
5260 7929 8.998814 TGATATATAGAAACACAGGGGAAAGAA 58.001 33.333 0.00 0.00 0.00 2.52
5261 7930 8.561536 TGATATATAGAAACACAGGGGAAAGA 57.438 34.615 0.00 0.00 0.00 2.52
5262 7931 9.277783 CTTGATATATAGAAACACAGGGGAAAG 57.722 37.037 0.00 0.00 0.00 2.62
5263 7932 7.719633 GCTTGATATATAGAAACACAGGGGAAA 59.280 37.037 0.00 0.00 0.00 3.13
5282 7951 9.851686 ACCTTCATTATGTATTTCTGCTTGATA 57.148 29.630 0.00 0.00 0.00 2.15
5284 7953 9.851686 ATACCTTCATTATGTATTTCTGCTTGA 57.148 29.630 0.00 0.00 0.00 3.02
5287 7956 9.851686 TTCATACCTTCATTATGTATTTCTGCT 57.148 29.630 0.00 0.00 0.00 4.24
5291 7960 9.793259 TCCCTTCATACCTTCATTATGTATTTC 57.207 33.333 0.00 0.00 0.00 2.17
5297 7966 7.941238 ACTTCATCCCTTCATACCTTCATTATG 59.059 37.037 0.00 0.00 0.00 1.90
5298 7967 7.941238 CACTTCATCCCTTCATACCTTCATTAT 59.059 37.037 0.00 0.00 0.00 1.28
5300 7969 6.069440 TCACTTCATCCCTTCATACCTTCATT 60.069 38.462 0.00 0.00 0.00 2.57
5301 7970 5.429762 TCACTTCATCCCTTCATACCTTCAT 59.570 40.000 0.00 0.00 0.00 2.57
5303 7972 5.359194 TCACTTCATCCCTTCATACCTTC 57.641 43.478 0.00 0.00 0.00 3.46
5305 7974 4.080299 GGTTCACTTCATCCCTTCATACCT 60.080 45.833 0.00 0.00 0.00 3.08
5307 7976 4.636206 GTGGTTCACTTCATCCCTTCATAC 59.364 45.833 0.00 0.00 0.00 2.39
5308 7977 4.536090 AGTGGTTCACTTCATCCCTTCATA 59.464 41.667 0.00 0.00 42.59 2.15
5310 7979 2.711009 AGTGGTTCACTTCATCCCTTCA 59.289 45.455 0.00 0.00 42.59 3.02
5311 7980 3.425162 AGTGGTTCACTTCATCCCTTC 57.575 47.619 0.00 0.00 42.59 3.46
5327 8059 8.213679 TCTTTCTATTAGATGGATTCCAAGTGG 58.786 37.037 9.98 0.00 36.95 4.00
5328 8060 9.618890 TTCTTTCTATTAGATGGATTCCAAGTG 57.381 33.333 9.98 0.00 36.95 3.16
5329 8061 9.620259 GTTCTTTCTATTAGATGGATTCCAAGT 57.380 33.333 9.98 2.42 36.95 3.16
5332 8064 8.213679 CCAGTTCTTTCTATTAGATGGATTCCA 58.786 37.037 8.08 8.08 38.19 3.53
5333 8065 8.432805 TCCAGTTCTTTCTATTAGATGGATTCC 58.567 37.037 7.18 0.00 29.90 3.01
5334 8066 9.487790 CTCCAGTTCTTTCTATTAGATGGATTC 57.512 37.037 10.45 3.34 32.92 2.52
5335 8067 8.435982 CCTCCAGTTCTTTCTATTAGATGGATT 58.564 37.037 10.45 0.00 32.92 3.01
5336 8068 7.570607 ACCTCCAGTTCTTTCTATTAGATGGAT 59.429 37.037 10.45 0.00 32.92 3.41
5337 8069 6.903534 ACCTCCAGTTCTTTCTATTAGATGGA 59.096 38.462 9.86 9.86 32.57 3.41
5338 8070 6.989169 CACCTCCAGTTCTTTCTATTAGATGG 59.011 42.308 0.00 0.00 0.00 3.51
5339 8071 6.481644 GCACCTCCAGTTCTTTCTATTAGATG 59.518 42.308 0.00 0.00 0.00 2.90
5340 8072 6.156949 TGCACCTCCAGTTCTTTCTATTAGAT 59.843 38.462 0.00 0.00 0.00 1.98
5341 8073 5.483937 TGCACCTCCAGTTCTTTCTATTAGA 59.516 40.000 0.00 0.00 0.00 2.10
5342 8074 5.734720 TGCACCTCCAGTTCTTTCTATTAG 58.265 41.667 0.00 0.00 0.00 1.73
5343 8075 5.755409 TGCACCTCCAGTTCTTTCTATTA 57.245 39.130 0.00 0.00 0.00 0.98
5344 8076 4.640771 TGCACCTCCAGTTCTTTCTATT 57.359 40.909 0.00 0.00 0.00 1.73
5345 8077 4.566488 CCTTGCACCTCCAGTTCTTTCTAT 60.566 45.833 0.00 0.00 0.00 1.98
5346 8078 3.244561 CCTTGCACCTCCAGTTCTTTCTA 60.245 47.826 0.00 0.00 0.00 2.10
5347 8079 2.487986 CCTTGCACCTCCAGTTCTTTCT 60.488 50.000 0.00 0.00 0.00 2.52
5348 8080 1.882623 CCTTGCACCTCCAGTTCTTTC 59.117 52.381 0.00 0.00 0.00 2.62
5349 8081 1.215423 ACCTTGCACCTCCAGTTCTTT 59.785 47.619 0.00 0.00 0.00 2.52
5350 8082 0.846693 ACCTTGCACCTCCAGTTCTT 59.153 50.000 0.00 0.00 0.00 2.52
5351 8083 0.846693 AACCTTGCACCTCCAGTTCT 59.153 50.000 0.00 0.00 0.00 3.01
5352 8084 1.202818 AGAACCTTGCACCTCCAGTTC 60.203 52.381 0.00 0.00 35.08 3.01
5353 8085 0.846693 AGAACCTTGCACCTCCAGTT 59.153 50.000 0.00 0.00 0.00 3.16
5354 8086 1.729586 TAGAACCTTGCACCTCCAGT 58.270 50.000 0.00 0.00 0.00 4.00
5355 8087 2.427506 GTTAGAACCTTGCACCTCCAG 58.572 52.381 0.00 0.00 0.00 3.86
5356 8088 1.073284 GGTTAGAACCTTGCACCTCCA 59.927 52.381 4.09 0.00 45.75 3.86
5357 8089 1.822506 GGTTAGAACCTTGCACCTCC 58.177 55.000 4.09 0.00 45.75 4.30
5368 8100 6.876257 AGAGAATGACTGAATGTGGTTAGAAC 59.124 38.462 0.00 0.00 0.00 3.01
5369 8101 7.009179 AGAGAATGACTGAATGTGGTTAGAA 57.991 36.000 0.00 0.00 0.00 2.10
5370 8102 6.611613 AGAGAATGACTGAATGTGGTTAGA 57.388 37.500 0.00 0.00 0.00 2.10
5371 8103 8.954950 ATTAGAGAATGACTGAATGTGGTTAG 57.045 34.615 0.00 0.00 0.00 2.34
5372 8104 8.539544 TGATTAGAGAATGACTGAATGTGGTTA 58.460 33.333 0.00 0.00 0.00 2.85
5373 8105 7.335422 GTGATTAGAGAATGACTGAATGTGGTT 59.665 37.037 0.00 0.00 0.00 3.67
5374 8106 6.820656 GTGATTAGAGAATGACTGAATGTGGT 59.179 38.462 0.00 0.00 0.00 4.16
5391 8123 5.780282 TCTGGTTCTCTTCCAAGTGATTAGA 59.220 40.000 0.00 0.00 34.35 2.10
5392 8124 6.042638 TCTGGTTCTCTTCCAAGTGATTAG 57.957 41.667 0.00 0.00 34.35 1.73
5401 8133 1.433199 TCCTCCTCTGGTTCTCTTCCA 59.567 52.381 0.00 0.00 0.00 3.53
5402 8134 2.239681 TCCTCCTCTGGTTCTCTTCC 57.760 55.000 0.00 0.00 0.00 3.46
5404 8136 2.024846 TCGATCCTCCTCTGGTTCTCTT 60.025 50.000 0.00 0.00 0.00 2.85
5405 8137 1.566703 TCGATCCTCCTCTGGTTCTCT 59.433 52.381 0.00 0.00 0.00 3.10
5406 8138 2.060050 TCGATCCTCCTCTGGTTCTC 57.940 55.000 0.00 0.00 0.00 2.87
5407 8139 2.104170 GTTCGATCCTCCTCTGGTTCT 58.896 52.381 0.00 0.00 0.00 3.01
5408 8140 2.100087 GAGTTCGATCCTCCTCTGGTTC 59.900 54.545 2.04 0.00 0.00 3.62
5411 8143 2.065899 AGAGTTCGATCCTCCTCTGG 57.934 55.000 8.54 0.00 33.19 3.86
5412 8144 4.204012 AGTAAGAGTTCGATCCTCCTCTG 58.796 47.826 8.54 0.00 34.62 3.35
5413 8145 4.513406 AGTAAGAGTTCGATCCTCCTCT 57.487 45.455 8.54 2.24 35.86 3.69
5416 8148 5.831702 TTGTAGTAAGAGTTCGATCCTCC 57.168 43.478 8.54 0.00 0.00 4.30
5417 8149 7.314393 AGTTTTGTAGTAAGAGTTCGATCCTC 58.686 38.462 4.82 4.82 0.00 3.71
5418 8150 7.229581 AGTTTTGTAGTAAGAGTTCGATCCT 57.770 36.000 0.00 0.00 0.00 3.24
5420 8152 7.597743 TCCAAGTTTTGTAGTAAGAGTTCGATC 59.402 37.037 0.00 0.00 0.00 3.69
5421 8153 7.439381 TCCAAGTTTTGTAGTAAGAGTTCGAT 58.561 34.615 0.00 0.00 0.00 3.59
5423 8155 7.437267 TCTTCCAAGTTTTGTAGTAAGAGTTCG 59.563 37.037 0.00 0.00 0.00 3.95
5424 8156 8.658499 TCTTCCAAGTTTTGTAGTAAGAGTTC 57.342 34.615 0.00 0.00 0.00 3.01
5425 8157 9.628500 AATCTTCCAAGTTTTGTAGTAAGAGTT 57.372 29.630 0.00 0.00 0.00 3.01
5426 8158 9.274206 GAATCTTCCAAGTTTTGTAGTAAGAGT 57.726 33.333 0.00 0.00 0.00 3.24
5427 8159 8.436200 CGAATCTTCCAAGTTTTGTAGTAAGAG 58.564 37.037 0.00 0.00 0.00 2.85
5429 8161 8.306680 TCGAATCTTCCAAGTTTTGTAGTAAG 57.693 34.615 0.00 0.00 0.00 2.34
5431 8163 7.439381 ACTCGAATCTTCCAAGTTTTGTAGTA 58.561 34.615 0.00 0.00 0.00 1.82
5432 8164 6.289064 ACTCGAATCTTCCAAGTTTTGTAGT 58.711 36.000 0.00 0.00 0.00 2.73
5433 8165 6.787085 ACTCGAATCTTCCAAGTTTTGTAG 57.213 37.500 0.00 0.00 0.00 2.74
5435 8167 6.522054 TCTACTCGAATCTTCCAAGTTTTGT 58.478 36.000 0.00 0.00 0.00 2.83
5438 8170 6.936279 TCATCTACTCGAATCTTCCAAGTTT 58.064 36.000 0.00 0.00 0.00 2.66
5449 9488 6.829298 TGTTCCTAGTTCTCATCTACTCGAAT 59.171 38.462 0.00 0.00 0.00 3.34
5453 9492 9.959749 CTAAATGTTCCTAGTTCTCATCTACTC 57.040 37.037 0.00 0.00 0.00 2.59
5454 9493 8.919145 CCTAAATGTTCCTAGTTCTCATCTACT 58.081 37.037 0.00 0.00 0.00 2.57
5458 9497 7.556844 TGTCCTAAATGTTCCTAGTTCTCATC 58.443 38.462 0.00 0.00 0.00 2.92
5459 9498 7.400339 TCTGTCCTAAATGTTCCTAGTTCTCAT 59.600 37.037 0.00 0.00 0.00 2.90
5460 9499 6.724441 TCTGTCCTAAATGTTCCTAGTTCTCA 59.276 38.462 0.00 0.00 0.00 3.27
5462 9501 7.235812 AGTTCTGTCCTAAATGTTCCTAGTTCT 59.764 37.037 0.00 0.00 0.00 3.01
5463 9502 7.387643 AGTTCTGTCCTAAATGTTCCTAGTTC 58.612 38.462 0.00 0.00 0.00 3.01
5464 9503 7.317722 AGTTCTGTCCTAAATGTTCCTAGTT 57.682 36.000 0.00 0.00 0.00 2.24
5538 9662 1.812571 GTTGATGGTGCAACTACCCAG 59.187 52.381 2.04 0.00 43.60 4.45
5604 9729 5.579511 CCATAAAGGATTTGAGCTGCTTTTG 59.420 40.000 2.53 0.00 39.63 2.44
5623 9757 8.671987 TCCTATTTTTCATTTTGTCCCCATAA 57.328 30.769 0.00 0.00 0.00 1.90
5626 9760 6.318913 TCTCCTATTTTTCATTTTGTCCCCA 58.681 36.000 0.00 0.00 0.00 4.96
5678 10057 9.844790 CATGACTTCAAAATTACAAGCTTCATA 57.155 29.630 0.00 0.00 0.00 2.15
5679 10058 8.362639 ACATGACTTCAAAATTACAAGCTTCAT 58.637 29.630 0.00 0.00 0.00 2.57
5694 10073 6.456853 GCGCTGTTATATTCACATGACTTCAA 60.457 38.462 0.00 0.00 0.00 2.69
5704 10083 6.358030 GTCATGATTTGCGCTGTTATATTCAC 59.642 38.462 9.73 0.00 0.00 3.18
5730 10109 9.748708 CATTTTCCTTCTTGAACATGTCTTAAA 57.251 29.630 0.00 0.00 31.08 1.52
5761 10140 8.443953 AGTTCAGAATATCCTTCATAAGTTGC 57.556 34.615 0.00 0.00 0.00 4.17
5785 10164 7.309438 CCCCAAATTCTTAGAAAGGTTTCAGAG 60.309 40.741 0.00 2.82 39.61 3.35
5796 10175 7.123383 GGATAAACCTCCCCAAATTCTTAGAA 58.877 38.462 0.00 0.00 35.41 2.10
5867 10260 3.760151 CTGTGGAATGGCTTGATCTTTGA 59.240 43.478 0.00 0.00 0.00 2.69
5950 10351 5.291293 AGTTTATGCACGGTCAAATGTAC 57.709 39.130 0.00 0.00 0.00 2.90
5951 10352 5.950758 AAGTTTATGCACGGTCAAATGTA 57.049 34.783 0.00 0.00 0.00 2.29
5952 10353 4.846779 AAGTTTATGCACGGTCAAATGT 57.153 36.364 0.00 0.00 0.00 2.71
5953 10354 6.861055 AGTTAAAGTTTATGCACGGTCAAATG 59.139 34.615 0.00 0.00 0.00 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.