Multiple sequence alignment - TraesCS4A01G220400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G220400 chr4A 100.000 3803 0 0 1 3803 523455273 523459075 0.000000e+00 7023.0
1 TraesCS4A01G220400 chr4B 92.369 1638 78 26 1493 3097 104337612 104339235 0.000000e+00 2289.0
2 TraesCS4A01G220400 chr4B 86.505 741 55 25 578 1295 104336505 104337223 0.000000e+00 773.0
3 TraesCS4A01G220400 chr4B 90.741 486 26 9 28 498 104335958 104336439 6.930000e-177 630.0
4 TraesCS4A01G220400 chr4B 90.393 229 18 4 3224 3449 104339300 104339527 7.990000e-77 298.0
5 TraesCS4A01G220400 chr4B 91.045 67 6 0 3128 3194 104339230 104339296 1.450000e-14 91.6
6 TraesCS4A01G220400 chr4B 97.500 40 1 0 3429 3468 104339531 104339570 6.820000e-08 69.4
7 TraesCS4A01G220400 chr4D 92.336 1618 85 22 1506 3097 70360230 70361834 0.000000e+00 2265.0
8 TraesCS4A01G220400 chr4D 86.701 767 61 32 762 1494 70359307 70360066 0.000000e+00 813.0
9 TraesCS4A01G220400 chr4D 94.622 502 18 5 1 498 70358521 70359017 0.000000e+00 769.0
10 TraesCS4A01G220400 chr4D 86.979 192 18 3 3128 3319 70361829 70362013 3.850000e-50 209.0
11 TraesCS4A01G220400 chr4D 94.690 113 6 0 578 690 70359115 70359227 3.900000e-40 176.0
12 TraesCS4A01G220400 chr4D 75.667 300 38 12 3321 3605 70362133 70362412 2.400000e-22 117.0
13 TraesCS4A01G220400 chr5D 84.531 1364 135 40 1619 2940 404035270 404036599 0.000000e+00 1280.0
14 TraesCS4A01G220400 chr5A 83.671 1433 144 55 1571 2940 510289115 510290520 0.000000e+00 1267.0
15 TraesCS4A01G220400 chr5B 83.084 1401 145 50 1585 2947 484728221 484726875 0.000000e+00 1190.0
16 TraesCS4A01G220400 chr7D 78.880 393 52 19 1571 1944 292419721 292420101 1.770000e-58 237.0
17 TraesCS4A01G220400 chr2A 86.111 108 15 0 325 432 641392597 641392490 2.400000e-22 117.0
18 TraesCS4A01G220400 chr2D 85.185 108 16 0 325 432 495779367 495779260 1.120000e-20 111.0
19 TraesCS4A01G220400 chr2B 85.185 108 16 0 325 432 583410826 583410719 1.120000e-20 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G220400 chr4A 523455273 523459075 3802 False 7023.000000 7023 100.000000 1 3803 1 chr4A.!!$F1 3802
1 TraesCS4A01G220400 chr4B 104335958 104339570 3612 False 691.833333 2289 91.425500 28 3468 6 chr4B.!!$F1 3440
2 TraesCS4A01G220400 chr4D 70358521 70362412 3891 False 724.833333 2265 88.499167 1 3605 6 chr4D.!!$F1 3604
3 TraesCS4A01G220400 chr5D 404035270 404036599 1329 False 1280.000000 1280 84.531000 1619 2940 1 chr5D.!!$F1 1321
4 TraesCS4A01G220400 chr5A 510289115 510290520 1405 False 1267.000000 1267 83.671000 1571 2940 1 chr5A.!!$F1 1369
5 TraesCS4A01G220400 chr5B 484726875 484728221 1346 True 1190.000000 1190 83.084000 1585 2947 1 chr5B.!!$R1 1362

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
624 666 0.618968 TGGGCACTGTTGGGGTTTTT 60.619 50.0 0.0 0.0 0.00 1.94 F
1961 2328 0.108138 AGTGTGGAGCGTATCAAGGC 60.108 55.0 0.0 0.0 36.74 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2339 2719 0.517316 GACAAACCGGCAGCAGTAAG 59.483 55.0 0.0 0.0 0.0 2.34 R
3720 4311 0.032815 TCCAATGACAACACGCTCGA 59.967 50.0 0.0 0.0 0.0 4.04 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
82 83 1.953138 GTCATCTGCCTCGATGCCG 60.953 63.158 10.31 3.95 40.41 5.69
182 189 5.508489 CGTCTCCAAACACTAGAAACCAGTA 60.508 44.000 0.00 0.00 0.00 2.74
249 257 5.546035 AATTAAGGACCCAGTAACCCAAT 57.454 39.130 0.00 0.00 0.00 3.16
252 260 3.169512 AGGACCCAGTAACCCAATTTG 57.830 47.619 0.00 0.00 0.00 2.32
253 261 2.449345 AGGACCCAGTAACCCAATTTGT 59.551 45.455 0.00 0.00 0.00 2.83
254 262 3.658705 AGGACCCAGTAACCCAATTTGTA 59.341 43.478 0.00 0.00 0.00 2.41
255 263 3.760151 GGACCCAGTAACCCAATTTGTAC 59.240 47.826 0.00 0.00 0.00 2.90
256 264 4.507869 GGACCCAGTAACCCAATTTGTACT 60.508 45.833 0.00 0.00 0.00 2.73
285 293 1.871676 GTCGGGAGTTGGTTGAAGAAC 59.128 52.381 0.00 0.00 0.00 3.01
330 342 2.762535 AAGGATTACGGTGGTGTCAG 57.237 50.000 0.00 0.00 0.00 3.51
498 513 2.404995 GCTCTGCACAGATGGCCAC 61.405 63.158 8.16 1.58 36.76 5.01
500 515 2.753043 CTGCACAGATGGCCACCC 60.753 66.667 8.16 2.43 0.00 4.61
501 516 4.720902 TGCACAGATGGCCACCCG 62.721 66.667 8.16 0.47 0.00 5.28
503 518 4.033776 CACAGATGGCCACCCGGT 62.034 66.667 8.16 7.33 33.28 5.28
504 519 3.256960 ACAGATGGCCACCCGGTT 61.257 61.111 8.16 0.00 33.28 4.44
505 520 2.438434 CAGATGGCCACCCGGTTC 60.438 66.667 8.16 0.00 33.28 3.62
511 526 2.032376 GCCACCCGGTTCGGTTTA 59.968 61.111 0.00 0.00 46.80 2.01
512 527 2.327343 GCCACCCGGTTCGGTTTAC 61.327 63.158 0.00 0.00 46.80 2.01
514 529 1.672030 CACCCGGTTCGGTTTACCC 60.672 63.158 0.00 0.00 46.80 3.69
526 541 1.129251 GGTTTACCCGCGAAGTAAAGC 59.871 52.381 29.99 29.99 45.43 3.51
527 542 2.071540 GTTTACCCGCGAAGTAAAGCT 58.928 47.619 25.12 0.00 39.64 3.74
528 543 1.717194 TTACCCGCGAAGTAAAGCTG 58.283 50.000 8.23 0.00 0.00 4.24
529 544 0.738412 TACCCGCGAAGTAAAGCTGC 60.738 55.000 8.23 0.00 0.00 5.25
531 546 2.395690 CGCGAAGTAAAGCTGCGG 59.604 61.111 0.00 0.00 46.24 5.69
532 547 2.098489 GCGAAGTAAAGCTGCGGC 59.902 61.111 10.33 10.33 46.24 6.53
533 548 2.785258 CGAAGTAAAGCTGCGGCC 59.215 61.111 15.55 0.00 42.50 6.13
534 549 2.785258 GAAGTAAAGCTGCGGCCG 59.215 61.111 24.05 24.05 39.73 6.13
535 550 2.746277 AAGTAAAGCTGCGGCCGG 60.746 61.111 29.38 12.76 39.73 6.13
536 551 4.778143 AGTAAAGCTGCGGCCGGG 62.778 66.667 29.38 0.00 39.73 5.73
537 552 4.770874 GTAAAGCTGCGGCCGGGA 62.771 66.667 29.38 8.04 39.73 5.14
538 553 4.023234 TAAAGCTGCGGCCGGGAA 62.023 61.111 29.38 0.00 39.73 3.97
539 554 3.969250 TAAAGCTGCGGCCGGGAAG 62.969 63.158 29.38 3.87 39.73 3.46
564 579 5.363939 GAGCAAGAGCATACCTTGATAGTT 58.636 41.667 7.02 0.00 45.49 2.24
567 582 5.592054 CAAGAGCATACCTTGATAGTTCGA 58.408 41.667 0.00 0.00 42.57 3.71
580 595 1.227380 GTTCGATGATCCTGCGCCT 60.227 57.895 4.18 0.00 0.00 5.52
624 666 0.618968 TGGGCACTGTTGGGGTTTTT 60.619 50.000 0.00 0.00 0.00 1.94
690 732 2.549329 GGGAAACGTACCGAATTGTGTT 59.451 45.455 0.00 0.00 0.00 3.32
691 733 3.003585 GGGAAACGTACCGAATTGTGTTT 59.996 43.478 0.00 0.00 32.70 2.83
692 734 4.213674 GGAAACGTACCGAATTGTGTTTC 58.786 43.478 7.01 7.01 42.56 2.78
693 735 4.024641 GGAAACGTACCGAATTGTGTTTCT 60.025 41.667 13.33 0.00 42.76 2.52
694 736 5.488645 AAACGTACCGAATTGTGTTTCTT 57.511 34.783 0.00 0.00 0.00 2.52
695 737 5.488645 AACGTACCGAATTGTGTTTCTTT 57.511 34.783 0.00 0.00 0.00 2.52
696 738 5.488645 ACGTACCGAATTGTGTTTCTTTT 57.511 34.783 0.00 0.00 0.00 2.27
697 739 5.882553 ACGTACCGAATTGTGTTTCTTTTT 58.117 33.333 0.00 0.00 0.00 1.94
716 758 2.559698 TTGTTGATGAGAAAGCCCGA 57.440 45.000 0.00 0.00 0.00 5.14
718 760 3.071874 TGTTGATGAGAAAGCCCGAAT 57.928 42.857 0.00 0.00 0.00 3.34
719 761 3.420893 TGTTGATGAGAAAGCCCGAATT 58.579 40.909 0.00 0.00 0.00 2.17
721 763 3.071874 TGATGAGAAAGCCCGAATTGT 57.928 42.857 0.00 0.00 0.00 2.71
722 764 2.749076 TGATGAGAAAGCCCGAATTGTG 59.251 45.455 0.00 0.00 0.00 3.33
723 765 2.270352 TGAGAAAGCCCGAATTGTGT 57.730 45.000 0.00 0.00 0.00 3.72
725 767 3.071479 TGAGAAAGCCCGAATTGTGTAC 58.929 45.455 0.00 0.00 0.00 2.90
726 768 2.073816 AGAAAGCCCGAATTGTGTACG 58.926 47.619 0.00 0.00 0.00 3.67
727 769 1.129811 GAAAGCCCGAATTGTGTACGG 59.870 52.381 0.00 0.00 45.24 4.02
731 773 2.380081 CCGAATTGTGTACGGGAGC 58.620 57.895 0.00 0.00 42.48 4.70
732 774 1.087771 CCGAATTGTGTACGGGAGCC 61.088 60.000 0.00 0.00 42.48 4.70
734 776 1.816074 GAATTGTGTACGGGAGCCAA 58.184 50.000 0.00 0.00 0.00 4.52
735 777 1.737793 GAATTGTGTACGGGAGCCAAG 59.262 52.381 0.00 0.00 0.00 3.61
736 778 0.981183 ATTGTGTACGGGAGCCAAGA 59.019 50.000 0.00 0.00 0.00 3.02
737 779 0.759959 TTGTGTACGGGAGCCAAGAA 59.240 50.000 0.00 0.00 0.00 2.52
783 835 1.631405 CTGGGCCTAGATGAGAGAGG 58.369 60.000 11.42 0.00 0.00 3.69
804 856 1.455773 GGCTCCAATGGGGCCTAAC 60.456 63.158 34.88 9.33 43.38 2.34
812 864 2.107204 CAATGGGGCCTAACTGATAGCT 59.893 50.000 0.84 0.00 0.00 3.32
814 866 1.343985 TGGGGCCTAACTGATAGCTCA 60.344 52.381 0.84 0.00 0.00 4.26
874 933 2.874849 CCTGCTTCGACTTCTCTTCTC 58.125 52.381 0.00 0.00 0.00 2.87
875 934 2.491693 CCTGCTTCGACTTCTCTTCTCT 59.508 50.000 0.00 0.00 0.00 3.10
877 936 4.165779 CTGCTTCGACTTCTCTTCTCTTC 58.834 47.826 0.00 0.00 0.00 2.87
878 937 3.570125 TGCTTCGACTTCTCTTCTCTTCA 59.430 43.478 0.00 0.00 0.00 3.02
879 938 3.917985 GCTTCGACTTCTCTTCTCTTCAC 59.082 47.826 0.00 0.00 0.00 3.18
880 939 4.557695 GCTTCGACTTCTCTTCTCTTCACA 60.558 45.833 0.00 0.00 0.00 3.58
881 940 5.515797 TTCGACTTCTCTTCTCTTCACAA 57.484 39.130 0.00 0.00 0.00 3.33
882 941 5.114785 TCGACTTCTCTTCTCTTCACAAG 57.885 43.478 0.00 0.00 0.00 3.16
905 964 4.938226 GTCACAAGGAAGAAAGGATACAGG 59.062 45.833 0.00 0.00 41.41 4.00
935 1011 4.802051 CACCACCATCCCCAGCCG 62.802 72.222 0.00 0.00 0.00 5.52
1061 1138 1.001406 GCAGAGGACACTGTAAGCACT 59.999 52.381 0.00 0.00 39.73 4.40
1215 1293 2.201490 CTGGGCGGATCTAGGGGA 59.799 66.667 0.00 0.00 0.00 4.81
1216 1294 1.459539 CTGGGCGGATCTAGGGGAA 60.460 63.158 0.00 0.00 0.00 3.97
1231 1309 0.845102 GGGAAGGAACAAGGGGGAGA 60.845 60.000 0.00 0.00 0.00 3.71
1295 1373 1.066752 TGGGACGATGCGTTATCCG 59.933 57.895 0.00 0.00 41.37 4.18
1302 1380 1.517276 CGATGCGTTATCCGTGAGAAC 59.483 52.381 2.49 2.49 39.32 3.01
1358 1436 6.570672 ATGCATTGACAGTATGGATGAATC 57.429 37.500 0.00 0.00 43.62 2.52
1360 1438 5.529800 TGCATTGACAGTATGGATGAATCTG 59.470 40.000 0.00 0.00 43.62 2.90
1381 1487 5.126222 TCTGCTAGTTAGTCTCAACTCATGG 59.874 44.000 0.00 0.00 39.45 3.66
1382 1488 5.016831 TGCTAGTTAGTCTCAACTCATGGA 58.983 41.667 0.00 0.00 39.45 3.41
1383 1489 5.480422 TGCTAGTTAGTCTCAACTCATGGAA 59.520 40.000 0.00 0.00 39.45 3.53
1384 1490 6.155221 TGCTAGTTAGTCTCAACTCATGGAAT 59.845 38.462 0.00 0.00 39.45 3.01
1385 1491 7.342026 TGCTAGTTAGTCTCAACTCATGGAATA 59.658 37.037 0.00 0.00 39.45 1.75
1386 1492 8.364142 GCTAGTTAGTCTCAACTCATGGAATAT 58.636 37.037 0.00 0.00 39.45 1.28
1389 1495 8.207545 AGTTAGTCTCAACTCATGGAATATTCC 58.792 37.037 25.17 25.17 39.95 3.01
1417 1523 0.470766 ACGAACCAGCCCAACAGTTA 59.529 50.000 0.00 0.00 0.00 2.24
1422 1528 2.957474 ACCAGCCCAACAGTTACAAAT 58.043 42.857 0.00 0.00 0.00 2.32
1434 1540 7.095691 CCAACAGTTACAAATGCCTTTTACATG 60.096 37.037 0.00 0.00 0.00 3.21
1435 1541 5.925969 ACAGTTACAAATGCCTTTTACATGC 59.074 36.000 0.00 0.00 0.00 4.06
1436 1542 5.925397 CAGTTACAAATGCCTTTTACATGCA 59.075 36.000 0.00 0.00 39.68 3.96
1448 1639 7.095313 TGCCTTTTACATGCATTTATTTGTGTG 60.095 33.333 0.00 0.00 0.00 3.82
1458 1649 9.709495 ATGCATTTATTTGTGTGAACTTGTTAT 57.291 25.926 0.00 0.00 0.00 1.89
1476 1667 7.663081 ACTTGTTATCACATCTTGTTGTCTGAT 59.337 33.333 0.00 0.00 31.06 2.90
1478 1669 8.394971 TGTTATCACATCTTGTTGTCTGATTT 57.605 30.769 0.00 0.00 0.00 2.17
1539 1881 4.861196 AGTACAGGAGCTTCTCATCTGTA 58.139 43.478 0.00 8.09 35.64 2.74
1568 1910 3.237268 TGTTAACCAGCCCAACAGATT 57.763 42.857 2.48 0.00 0.00 2.40
1569 1911 4.374689 TGTTAACCAGCCCAACAGATTA 57.625 40.909 2.48 0.00 0.00 1.75
1612 1961 4.975502 GGTCATAACAATTGTGTGTGTGTG 59.024 41.667 12.82 4.79 38.27 3.82
1613 1962 5.449862 GGTCATAACAATTGTGTGTGTGTGT 60.450 40.000 12.82 0.00 38.27 3.72
1614 1963 6.033341 GTCATAACAATTGTGTGTGTGTGTT 58.967 36.000 12.82 0.00 38.27 3.32
1615 1964 7.190191 GTCATAACAATTGTGTGTGTGTGTTA 58.810 34.615 12.82 0.00 38.27 2.41
1616 1965 7.698550 GTCATAACAATTGTGTGTGTGTGTTAA 59.301 33.333 12.82 0.00 38.27 2.01
1617 1966 8.409371 TCATAACAATTGTGTGTGTGTGTTAAT 58.591 29.630 12.82 0.00 38.27 1.40
1618 1967 9.029243 CATAACAATTGTGTGTGTGTGTTAATT 57.971 29.630 12.82 0.00 38.27 1.40
1619 1968 6.884096 ACAATTGTGTGTGTGTGTTAATTG 57.116 33.333 11.07 0.00 38.98 2.32
1625 1974 7.339732 TGTGTGTGTGTGTTAATTGTTTTTC 57.660 32.000 0.00 0.00 0.00 2.29
1629 1979 9.692749 TGTGTGTGTGTTAATTGTTTTTCTTTA 57.307 25.926 0.00 0.00 0.00 1.85
1661 2011 0.542702 CATTGGCCAAGTTGTCCCCT 60.543 55.000 24.94 0.00 0.00 4.79
1671 2021 1.202770 AGTTGTCCCCTTAGTGTGCAC 60.203 52.381 10.75 10.75 0.00 4.57
1673 2023 1.375523 GTCCCCTTAGTGTGCACCG 60.376 63.158 15.69 0.00 0.00 4.94
1717 2074 9.221775 CTGTTGTGTCTTTCAGTAAATTTGTAC 57.778 33.333 0.00 0.00 0.00 2.90
1735 2092 4.561105 TGTACATGCACGTGATTAACTCA 58.439 39.130 22.23 5.93 0.00 3.41
1827 2186 2.304092 GGTGTGATCATGGCATGTGAT 58.696 47.619 25.62 14.93 38.94 3.06
1874 2240 3.990092 TGCACAGGTAAATATAGCTCCG 58.010 45.455 0.00 0.00 37.77 4.63
1906 2273 9.784531 ATGGAGGTCATTATATACTTTCTTGTG 57.215 33.333 0.00 0.00 30.55 3.33
1907 2274 7.715249 TGGAGGTCATTATATACTTTCTTGTGC 59.285 37.037 0.00 0.00 0.00 4.57
1961 2328 0.108138 AGTGTGGAGCGTATCAAGGC 60.108 55.000 0.00 0.00 36.74 4.35
2068 2435 4.993028 AGTTGCCTTTAATGGTGGTTAGA 58.007 39.130 9.02 0.00 0.00 2.10
2096 2466 7.187824 TGTTTTCCTTCTCTCTGCTATGTAT 57.812 36.000 0.00 0.00 0.00 2.29
2117 2487 9.803507 ATGTATAATCCATGTGACATCTTCATT 57.196 29.630 0.00 0.00 36.32 2.57
2118 2488 9.276590 TGTATAATCCATGTGACATCTTCATTC 57.723 33.333 0.00 0.00 36.32 2.67
2119 2489 9.276590 GTATAATCCATGTGACATCTTCATTCA 57.723 33.333 0.00 0.00 36.32 2.57
2124 2495 5.413523 CCATGTGACATCTTCATTCACTTCA 59.586 40.000 0.00 0.00 40.34 3.02
2322 2698 9.979578 TTGGCATGGTATATTATTCATTCAAAC 57.020 29.630 0.00 0.00 0.00 2.93
2323 2699 9.140874 TGGCATGGTATATTATTCATTCAAACA 57.859 29.630 0.00 0.00 0.00 2.83
2359 2739 1.225376 TTACTGCTGCCGGTTTGTCG 61.225 55.000 1.90 0.00 0.00 4.35
2367 2747 2.807878 CCGGTTTGTCGGCATTTTG 58.192 52.632 0.00 0.00 43.71 2.44
2388 2768 9.777297 ATTTTGTCTTATGCCTATTTTTGTTGT 57.223 25.926 0.00 0.00 0.00 3.32
2596 2976 7.485810 ACAAATTCCAGGTTACAACTTGTTAC 58.514 34.615 0.00 0.98 34.54 2.50
2736 3147 1.666011 CATCTACCCGCCGTATGCT 59.334 57.895 0.00 0.00 38.05 3.79
2884 3313 5.557136 GCGTTTGATCCGAATATGACTGAAG 60.557 44.000 0.00 0.00 0.00 3.02
2949 3378 6.505044 AAGTCTTTGTGAACGTTTAAGGTT 57.495 33.333 0.46 2.52 0.00 3.50
2984 3413 5.835280 TGTATGATGATGCCTCTTCACTCTA 59.165 40.000 9.27 0.00 38.10 2.43
2986 3415 3.640498 TGATGATGCCTCTTCACTCTAGG 59.360 47.826 3.86 0.00 32.34 3.02
3024 3461 4.996434 GTGCCTGCTCACCGTGCT 62.996 66.667 0.00 0.00 0.00 4.40
3029 3466 3.241530 TGCTCACCGTGCTCCCTT 61.242 61.111 0.00 0.00 0.00 3.95
3069 3510 5.484715 CCCTTTCATAGTCGAAACCTGTTA 58.515 41.667 0.00 0.00 31.71 2.41
3080 3522 8.221965 AGTCGAAACCTGTTATTTTTCTCTTT 57.778 30.769 0.00 0.00 0.00 2.52
3105 3547 9.790389 TTAAAATAATTTGTTCACGTCACTTGT 57.210 25.926 0.00 0.00 0.00 3.16
3106 3548 7.908193 AAATAATTTGTTCACGTCACTTGTC 57.092 32.000 0.00 0.00 0.00 3.18
3107 3549 3.585748 ATTTGTTCACGTCACTTGTCG 57.414 42.857 0.00 0.00 0.00 4.35
3108 3550 1.282817 TTGTTCACGTCACTTGTCGG 58.717 50.000 1.18 0.00 0.00 4.79
3109 3551 0.173935 TGTTCACGTCACTTGTCGGT 59.826 50.000 1.18 0.00 0.00 4.69
3110 3552 0.850856 GTTCACGTCACTTGTCGGTC 59.149 55.000 1.18 0.00 0.00 4.79
3111 3553 0.593008 TTCACGTCACTTGTCGGTCG 60.593 55.000 1.18 0.00 0.00 4.79
3112 3554 1.298863 CACGTCACTTGTCGGTCGT 60.299 57.895 1.18 0.00 0.00 4.34
3113 3555 0.868602 CACGTCACTTGTCGGTCGTT 60.869 55.000 1.18 0.00 0.00 3.85
3114 3556 0.868602 ACGTCACTTGTCGGTCGTTG 60.869 55.000 1.18 0.00 0.00 4.10
3115 3557 1.545614 CGTCACTTGTCGGTCGTTGG 61.546 60.000 0.00 0.00 0.00 3.77
3116 3558 1.593209 TCACTTGTCGGTCGTTGGC 60.593 57.895 0.00 0.00 0.00 4.52
3117 3559 1.594293 CACTTGTCGGTCGTTGGCT 60.594 57.895 0.00 0.00 0.00 4.75
3118 3560 1.145377 ACTTGTCGGTCGTTGGCTT 59.855 52.632 0.00 0.00 0.00 4.35
3119 3561 1.157870 ACTTGTCGGTCGTTGGCTTG 61.158 55.000 0.00 0.00 0.00 4.01
3120 3562 1.153329 TTGTCGGTCGTTGGCTTGT 60.153 52.632 0.00 0.00 0.00 3.16
3121 3563 0.745128 TTGTCGGTCGTTGGCTTGTT 60.745 50.000 0.00 0.00 0.00 2.83
3122 3564 1.278637 GTCGGTCGTTGGCTTGTTG 59.721 57.895 0.00 0.00 0.00 3.33
3123 3565 2.051345 CGGTCGTTGGCTTGTTGC 60.051 61.111 0.00 0.00 41.94 4.17
3124 3566 2.829206 CGGTCGTTGGCTTGTTGCA 61.829 57.895 0.00 0.00 45.15 4.08
3125 3567 1.659794 GGTCGTTGGCTTGTTGCAT 59.340 52.632 0.00 0.00 45.15 3.96
3126 3568 0.387239 GGTCGTTGGCTTGTTGCATC 60.387 55.000 0.00 0.00 45.15 3.91
3127 3569 0.725784 GTCGTTGGCTTGTTGCATCG 60.726 55.000 0.00 0.00 45.15 3.84
3128 3570 1.163420 TCGTTGGCTTGTTGCATCGT 61.163 50.000 0.00 0.00 45.15 3.73
3129 3571 0.317770 CGTTGGCTTGTTGCATCGTT 60.318 50.000 0.00 0.00 45.15 3.85
3130 3572 1.408422 GTTGGCTTGTTGCATCGTTC 58.592 50.000 0.00 0.00 45.15 3.95
3131 3573 1.028130 TTGGCTTGTTGCATCGTTCA 58.972 45.000 0.00 0.00 45.15 3.18
3132 3574 0.310543 TGGCTTGTTGCATCGTTCAC 59.689 50.000 0.00 0.00 45.15 3.18
3133 3575 0.387239 GGCTTGTTGCATCGTTCACC 60.387 55.000 0.00 0.00 45.15 4.02
3134 3576 0.310543 GCTTGTTGCATCGTTCACCA 59.689 50.000 0.00 0.00 42.31 4.17
3176 3618 5.468072 AGAAGTAATGATTCATGACGGCATC 59.532 40.000 0.00 0.00 30.85 3.91
3182 3624 4.512484 TGATTCATGACGGCATCTACAAA 58.488 39.130 0.00 0.00 30.68 2.83
3185 3627 4.729227 TCATGACGGCATCTACAAACTA 57.271 40.909 0.00 0.00 30.68 2.24
3194 3636 5.178797 GGCATCTACAAACTAGAGCAAGAA 58.821 41.667 0.00 0.00 0.00 2.52
3195 3637 5.064071 GGCATCTACAAACTAGAGCAAGAAC 59.936 44.000 0.00 0.00 0.00 3.01
3199 3641 3.744660 ACAAACTAGAGCAAGAACCAGG 58.255 45.455 0.00 0.00 0.00 4.45
3201 3643 1.650528 ACTAGAGCAAGAACCAGGCT 58.349 50.000 0.00 0.00 41.35 4.58
3207 3649 1.078848 CAAGAACCAGGCTCCCTCG 60.079 63.158 0.00 0.00 0.00 4.63
3209 3651 1.545706 AAGAACCAGGCTCCCTCGAC 61.546 60.000 0.00 0.00 0.00 4.20
3210 3652 2.203788 AACCAGGCTCCCTCGACA 60.204 61.111 0.00 0.00 0.00 4.35
3211 3653 2.232298 GAACCAGGCTCCCTCGACAG 62.232 65.000 0.00 0.00 0.00 3.51
3212 3654 2.681778 CCAGGCTCCCTCGACAGT 60.682 66.667 0.00 0.00 0.00 3.55
3213 3655 2.286523 CCAGGCTCCCTCGACAGTT 61.287 63.158 0.00 0.00 0.00 3.16
3214 3656 1.079543 CAGGCTCCCTCGACAGTTG 60.080 63.158 0.00 0.00 0.00 3.16
3240 3682 2.736670 AAGATACACCATTGCCTCCC 57.263 50.000 0.00 0.00 0.00 4.30
3260 3702 7.337167 CCTCCCTAATCATGATTATCTCCTTG 58.663 42.308 24.77 13.20 33.29 3.61
3278 3720 3.554752 CCTTGGAAATTTGGAACATGCGT 60.555 43.478 0.00 0.00 39.30 5.24
3293 3735 0.750249 TGCGTGGTGTTCTCTTCTGA 59.250 50.000 0.00 0.00 0.00 3.27
3327 3886 4.023707 CCGTCAAATTGGATCATCCTTAGC 60.024 45.833 4.96 0.00 37.46 3.09
3330 3889 3.864789 AATTGGATCATCCTTAGCCGT 57.135 42.857 4.96 0.00 37.46 5.68
3342 3901 2.354704 CCTTAGCCGTCTGTCATGGAAA 60.355 50.000 0.00 0.00 31.73 3.13
3365 3927 5.143376 ACAGAAAGGGATGCTGAAAATTG 57.857 39.130 0.00 0.00 33.94 2.32
3366 3928 4.020839 ACAGAAAGGGATGCTGAAAATTGG 60.021 41.667 0.00 0.00 33.94 3.16
3398 3960 4.058817 AGAACTTGCTACTCAAAACGGAG 58.941 43.478 0.00 0.00 40.79 4.63
3427 3989 3.726557 TTTCAGAGAAGGCATGGACAT 57.273 42.857 0.00 0.00 0.00 3.06
3462 4049 6.700081 GGGTTGTTGTTCCACTATTTTTCTTC 59.300 38.462 0.00 0.00 0.00 2.87
3468 4055 7.272037 TGTTCCACTATTTTTCTTCTTCCAC 57.728 36.000 0.00 0.00 0.00 4.02
3469 4056 6.831353 TGTTCCACTATTTTTCTTCTTCCACA 59.169 34.615 0.00 0.00 0.00 4.17
3470 4057 6.877611 TCCACTATTTTTCTTCTTCCACAC 57.122 37.500 0.00 0.00 0.00 3.82
3471 4058 6.361433 TCCACTATTTTTCTTCTTCCACACA 58.639 36.000 0.00 0.00 0.00 3.72
3472 4059 6.486657 TCCACTATTTTTCTTCTTCCACACAG 59.513 38.462 0.00 0.00 0.00 3.66
3473 4060 6.294176 CCACTATTTTTCTTCTTCCACACAGG 60.294 42.308 0.00 0.00 39.47 4.00
3474 4061 5.770162 ACTATTTTTCTTCTTCCACACAGGG 59.230 40.000 0.00 0.00 38.24 4.45
3476 4063 3.943671 TTTCTTCTTCCACACAGGGAA 57.056 42.857 0.00 0.00 44.50 3.97
3477 4064 3.943671 TTCTTCTTCCACACAGGGAAA 57.056 42.857 0.00 0.00 45.87 3.13
3478 4065 3.208747 TCTTCTTCCACACAGGGAAAC 57.791 47.619 0.00 0.00 45.87 2.78
3489 4076 2.348411 CAGGGAAACTGTCTGGTGTT 57.652 50.000 0.00 0.00 42.42 3.32
3490 4077 3.485463 CAGGGAAACTGTCTGGTGTTA 57.515 47.619 0.00 0.00 42.42 2.41
3491 4078 3.815809 CAGGGAAACTGTCTGGTGTTAA 58.184 45.455 0.00 0.00 42.42 2.01
3492 4079 4.204012 CAGGGAAACTGTCTGGTGTTAAA 58.796 43.478 0.00 0.00 42.42 1.52
3493 4080 4.642885 CAGGGAAACTGTCTGGTGTTAAAA 59.357 41.667 0.00 0.00 42.42 1.52
3494 4081 5.126384 CAGGGAAACTGTCTGGTGTTAAAAA 59.874 40.000 0.00 0.00 42.42 1.94
3521 4112 3.488553 GCCGTTGTTCAAAGGGTATATGC 60.489 47.826 16.44 0.00 0.00 3.14
3525 4116 1.937899 GTTCAAAGGGTATATGCGCGT 59.062 47.619 8.43 7.55 0.00 6.01
3529 4120 4.382291 TCAAAGGGTATATGCGCGTTTAT 58.618 39.130 7.78 8.05 0.00 1.40
3530 4121 5.539979 TCAAAGGGTATATGCGCGTTTATA 58.460 37.500 7.78 7.01 0.00 0.98
3542 4133 1.858458 GCGTTTATATGAGCGTCTGCA 59.142 47.619 5.68 0.00 46.23 4.41
3546 4137 4.900182 CGTTTATATGAGCGTCTGCAATTG 59.100 41.667 0.00 0.00 46.23 2.32
3553 4144 3.865164 TGAGCGTCTGCAATTGTACTATG 59.135 43.478 7.40 0.00 46.23 2.23
3556 4147 5.416083 AGCGTCTGCAATTGTACTATGTTA 58.584 37.500 7.40 0.00 46.23 2.41
3557 4148 5.872617 AGCGTCTGCAATTGTACTATGTTAA 59.127 36.000 7.40 0.00 46.23 2.01
3558 4149 6.036083 AGCGTCTGCAATTGTACTATGTTAAG 59.964 38.462 7.40 0.00 46.23 1.85
3605 4196 6.205853 TCAACAAATGGATAACAACTAAGCGT 59.794 34.615 0.00 0.00 0.00 5.07
3606 4197 6.178239 ACAAATGGATAACAACTAAGCGTC 57.822 37.500 0.00 0.00 0.00 5.19
3607 4198 5.938125 ACAAATGGATAACAACTAAGCGTCT 59.062 36.000 0.00 0.00 0.00 4.18
3608 4199 7.101054 ACAAATGGATAACAACTAAGCGTCTA 58.899 34.615 0.00 0.00 0.00 2.59
3609 4200 7.769044 ACAAATGGATAACAACTAAGCGTCTAT 59.231 33.333 0.00 0.00 0.00 1.98
3610 4201 7.715265 AATGGATAACAACTAAGCGTCTATG 57.285 36.000 0.00 0.00 0.00 2.23
3611 4202 6.459670 TGGATAACAACTAAGCGTCTATGA 57.540 37.500 0.00 0.00 0.00 2.15
3612 4203 7.050970 TGGATAACAACTAAGCGTCTATGAT 57.949 36.000 0.00 0.00 0.00 2.45
3613 4204 7.145985 TGGATAACAACTAAGCGTCTATGATC 58.854 38.462 0.00 0.00 0.00 2.92
3614 4205 6.586844 GGATAACAACTAAGCGTCTATGATCC 59.413 42.308 0.00 0.00 0.00 3.36
3615 4206 5.599999 AACAACTAAGCGTCTATGATCCT 57.400 39.130 0.00 0.00 0.00 3.24
3616 4207 5.189659 ACAACTAAGCGTCTATGATCCTC 57.810 43.478 0.00 0.00 0.00 3.71
3617 4208 4.222886 CAACTAAGCGTCTATGATCCTCG 58.777 47.826 0.00 0.00 0.00 4.63
3618 4209 3.478509 ACTAAGCGTCTATGATCCTCGT 58.521 45.455 0.00 0.00 0.00 4.18
3619 4210 3.884091 ACTAAGCGTCTATGATCCTCGTT 59.116 43.478 0.00 0.00 0.00 3.85
3620 4211 2.783828 AGCGTCTATGATCCTCGTTG 57.216 50.000 0.00 0.00 0.00 4.10
3621 4212 2.298610 AGCGTCTATGATCCTCGTTGA 58.701 47.619 0.00 0.00 0.00 3.18
3622 4213 2.887783 AGCGTCTATGATCCTCGTTGAT 59.112 45.455 0.00 0.00 0.00 2.57
3623 4214 3.057876 AGCGTCTATGATCCTCGTTGATC 60.058 47.826 9.15 9.15 41.27 2.92
3624 4215 3.057876 GCGTCTATGATCCTCGTTGATCT 60.058 47.826 14.76 6.41 41.42 2.75
3625 4216 4.717991 CGTCTATGATCCTCGTTGATCTC 58.282 47.826 14.76 0.00 41.42 2.75
3626 4217 4.454161 CGTCTATGATCCTCGTTGATCTCT 59.546 45.833 14.76 7.61 41.42 3.10
3627 4218 5.049060 CGTCTATGATCCTCGTTGATCTCTT 60.049 44.000 14.76 6.00 41.42 2.85
3628 4219 6.514212 CGTCTATGATCCTCGTTGATCTCTTT 60.514 42.308 14.76 4.29 41.42 2.52
3629 4220 7.308049 CGTCTATGATCCTCGTTGATCTCTTTA 60.308 40.741 14.76 0.00 41.42 1.85
3630 4221 7.806014 GTCTATGATCCTCGTTGATCTCTTTAC 59.194 40.741 14.76 6.46 41.42 2.01
3631 4222 5.263968 TGATCCTCGTTGATCTCTTTACC 57.736 43.478 14.76 0.00 41.42 2.85
3632 4223 4.956700 TGATCCTCGTTGATCTCTTTACCT 59.043 41.667 14.76 0.00 41.42 3.08
3633 4224 4.985538 TCCTCGTTGATCTCTTTACCTC 57.014 45.455 0.00 0.00 0.00 3.85
3634 4225 3.700038 TCCTCGTTGATCTCTTTACCTCC 59.300 47.826 0.00 0.00 0.00 4.30
3635 4226 3.181474 CCTCGTTGATCTCTTTACCTCCC 60.181 52.174 0.00 0.00 0.00 4.30
3636 4227 3.437213 TCGTTGATCTCTTTACCTCCCA 58.563 45.455 0.00 0.00 0.00 4.37
3637 4228 3.835978 TCGTTGATCTCTTTACCTCCCAA 59.164 43.478 0.00 0.00 0.00 4.12
3638 4229 3.933332 CGTTGATCTCTTTACCTCCCAAC 59.067 47.826 0.00 0.00 0.00 3.77
3639 4230 4.322801 CGTTGATCTCTTTACCTCCCAACT 60.323 45.833 0.00 0.00 32.83 3.16
3640 4231 5.179533 GTTGATCTCTTTACCTCCCAACTC 58.820 45.833 0.00 0.00 32.43 3.01
3641 4232 4.689062 TGATCTCTTTACCTCCCAACTCT 58.311 43.478 0.00 0.00 0.00 3.24
3642 4233 5.838955 TGATCTCTTTACCTCCCAACTCTA 58.161 41.667 0.00 0.00 0.00 2.43
3643 4234 6.444704 TGATCTCTTTACCTCCCAACTCTAT 58.555 40.000 0.00 0.00 0.00 1.98
3644 4235 6.903534 TGATCTCTTTACCTCCCAACTCTATT 59.096 38.462 0.00 0.00 0.00 1.73
3645 4236 6.546428 TCTCTTTACCTCCCAACTCTATTG 57.454 41.667 0.00 0.00 0.00 1.90
3646 4237 5.099042 TCTTTACCTCCCAACTCTATTGC 57.901 43.478 0.00 0.00 0.00 3.56
3647 4238 4.534500 TCTTTACCTCCCAACTCTATTGCA 59.466 41.667 0.00 0.00 0.00 4.08
3648 4239 2.789409 ACCTCCCAACTCTATTGCAC 57.211 50.000 0.00 0.00 0.00 4.57
3649 4240 1.282157 ACCTCCCAACTCTATTGCACC 59.718 52.381 0.00 0.00 0.00 5.01
3650 4241 1.561542 CCTCCCAACTCTATTGCACCT 59.438 52.381 0.00 0.00 0.00 4.00
3651 4242 2.025887 CCTCCCAACTCTATTGCACCTT 60.026 50.000 0.00 0.00 0.00 3.50
3652 4243 3.274288 CTCCCAACTCTATTGCACCTTC 58.726 50.000 0.00 0.00 0.00 3.46
3653 4244 2.026262 TCCCAACTCTATTGCACCTTCC 60.026 50.000 0.00 0.00 0.00 3.46
3654 4245 2.290896 CCCAACTCTATTGCACCTTCCA 60.291 50.000 0.00 0.00 0.00 3.53
3655 4246 3.624777 CCAACTCTATTGCACCTTCCAT 58.375 45.455 0.00 0.00 0.00 3.41
3656 4247 4.019174 CCAACTCTATTGCACCTTCCATT 58.981 43.478 0.00 0.00 0.00 3.16
3657 4248 5.192927 CCAACTCTATTGCACCTTCCATTA 58.807 41.667 0.00 0.00 0.00 1.90
3658 4249 5.066505 CCAACTCTATTGCACCTTCCATTAC 59.933 44.000 0.00 0.00 0.00 1.89
3659 4250 5.435686 ACTCTATTGCACCTTCCATTACA 57.564 39.130 0.00 0.00 0.00 2.41
3660 4251 6.006275 ACTCTATTGCACCTTCCATTACAT 57.994 37.500 0.00 0.00 0.00 2.29
3661 4252 5.824624 ACTCTATTGCACCTTCCATTACATG 59.175 40.000 0.00 0.00 0.00 3.21
3662 4253 6.000246 TCTATTGCACCTTCCATTACATGA 58.000 37.500 0.00 0.00 0.00 3.07
3663 4254 6.057533 TCTATTGCACCTTCCATTACATGAG 58.942 40.000 0.00 0.00 0.00 2.90
3664 4255 3.998913 TGCACCTTCCATTACATGAGA 57.001 42.857 0.00 0.00 0.00 3.27
3665 4256 3.877559 TGCACCTTCCATTACATGAGAG 58.122 45.455 0.00 0.00 0.00 3.20
3666 4257 3.264193 TGCACCTTCCATTACATGAGAGT 59.736 43.478 0.00 0.00 0.00 3.24
3667 4258 4.469586 TGCACCTTCCATTACATGAGAGTA 59.530 41.667 0.00 0.00 0.00 2.59
3668 4259 5.053145 GCACCTTCCATTACATGAGAGTAG 58.947 45.833 0.00 0.00 0.00 2.57
3669 4260 5.163405 GCACCTTCCATTACATGAGAGTAGA 60.163 44.000 0.00 0.00 0.00 2.59
3670 4261 6.511416 CACCTTCCATTACATGAGAGTAGAG 58.489 44.000 0.00 0.00 0.00 2.43
3671 4262 5.069781 ACCTTCCATTACATGAGAGTAGAGC 59.930 44.000 0.00 0.00 0.00 4.09
3672 4263 5.510520 CCTTCCATTACATGAGAGTAGAGCC 60.511 48.000 0.00 0.00 0.00 4.70
3673 4264 4.809193 TCCATTACATGAGAGTAGAGCCT 58.191 43.478 0.00 0.00 0.00 4.58
3674 4265 4.830046 TCCATTACATGAGAGTAGAGCCTC 59.170 45.833 0.00 0.00 0.00 4.70
3675 4266 4.832266 CCATTACATGAGAGTAGAGCCTCT 59.168 45.833 0.00 0.00 44.44 3.69
3676 4267 5.304101 CCATTACATGAGAGTAGAGCCTCTT 59.696 44.000 0.00 0.00 41.85 2.85
3677 4268 5.843673 TTACATGAGAGTAGAGCCTCTTG 57.156 43.478 0.00 0.00 41.85 3.02
3678 4269 3.974719 ACATGAGAGTAGAGCCTCTTGA 58.025 45.455 0.00 0.00 41.85 3.02
3679 4270 3.953612 ACATGAGAGTAGAGCCTCTTGAG 59.046 47.826 0.00 0.00 41.85 3.02
3680 4271 2.374184 TGAGAGTAGAGCCTCTTGAGC 58.626 52.381 0.00 0.00 41.85 4.26
3681 4272 1.681264 GAGAGTAGAGCCTCTTGAGCC 59.319 57.143 0.00 0.00 41.85 4.70
3682 4273 0.383949 GAGTAGAGCCTCTTGAGCCG 59.616 60.000 0.00 0.00 0.00 5.52
3683 4274 1.227118 GTAGAGCCTCTTGAGCCGC 60.227 63.158 0.00 0.00 0.00 6.53
3684 4275 2.775856 TAGAGCCTCTTGAGCCGCG 61.776 63.158 0.00 0.00 0.00 6.46
3702 4293 4.162690 GCACCCGGTAGCCTCCAG 62.163 72.222 0.00 0.00 0.00 3.86
3703 4294 2.683933 CACCCGGTAGCCTCCAGT 60.684 66.667 0.00 0.00 0.00 4.00
3704 4295 2.683933 ACCCGGTAGCCTCCAGTG 60.684 66.667 0.00 0.00 0.00 3.66
3705 4296 2.363795 CCCGGTAGCCTCCAGTGA 60.364 66.667 0.00 0.00 0.00 3.41
3706 4297 2.722201 CCCGGTAGCCTCCAGTGAC 61.722 68.421 0.00 0.00 0.00 3.67
3707 4298 2.490217 CGGTAGCCTCCAGTGACG 59.510 66.667 0.00 0.00 0.00 4.35
3708 4299 2.893398 GGTAGCCTCCAGTGACGG 59.107 66.667 0.00 0.00 0.00 4.79
3709 4300 2.184579 GTAGCCTCCAGTGACGGC 59.815 66.667 13.00 13.00 44.09 5.68
3712 4303 2.184579 GCCTCCAGTGACGGCTAC 59.815 66.667 13.46 0.00 40.62 3.58
3713 4304 2.893398 CCTCCAGTGACGGCTACC 59.107 66.667 0.00 0.00 0.00 3.18
3714 4305 1.982395 CCTCCAGTGACGGCTACCA 60.982 63.158 0.00 0.00 0.00 3.25
3715 4306 1.513158 CTCCAGTGACGGCTACCAG 59.487 63.158 0.00 0.00 0.00 4.00
3716 4307 2.125512 CCAGTGACGGCTACCAGC 60.126 66.667 0.00 0.00 41.46 4.85
3725 4316 2.886124 GCTACCAGCCGTTCGAGC 60.886 66.667 0.00 0.00 34.48 5.03
3726 4317 2.579787 CTACCAGCCGTTCGAGCG 60.580 66.667 15.26 15.26 34.64 5.03
3727 4318 3.338126 CTACCAGCCGTTCGAGCGT 62.338 63.158 20.30 3.97 34.64 5.07
3728 4319 3.620300 TACCAGCCGTTCGAGCGTG 62.620 63.158 20.30 12.51 34.64 5.34
3730 4321 3.036084 CAGCCGTTCGAGCGTGTT 61.036 61.111 20.30 7.23 34.64 3.32
3731 4322 3.036084 AGCCGTTCGAGCGTGTTG 61.036 61.111 20.30 6.12 34.64 3.33
3732 4323 3.335534 GCCGTTCGAGCGTGTTGT 61.336 61.111 20.30 0.00 0.00 3.32
3733 4324 2.844146 CCGTTCGAGCGTGTTGTC 59.156 61.111 20.30 0.00 0.00 3.18
3734 4325 1.947146 CCGTTCGAGCGTGTTGTCA 60.947 57.895 20.30 0.00 0.00 3.58
3735 4326 1.282248 CCGTTCGAGCGTGTTGTCAT 61.282 55.000 20.30 0.00 0.00 3.06
3736 4327 0.506932 CGTTCGAGCGTGTTGTCATT 59.493 50.000 13.95 0.00 0.00 2.57
3737 4328 1.718361 CGTTCGAGCGTGTTGTCATTG 60.718 52.381 13.95 0.00 0.00 2.82
3738 4329 0.865111 TTCGAGCGTGTTGTCATTGG 59.135 50.000 0.00 0.00 0.00 3.16
3739 4330 0.032815 TCGAGCGTGTTGTCATTGGA 59.967 50.000 0.00 0.00 0.00 3.53
3740 4331 0.865111 CGAGCGTGTTGTCATTGGAA 59.135 50.000 0.00 0.00 0.00 3.53
3741 4332 1.136252 CGAGCGTGTTGTCATTGGAAG 60.136 52.381 0.00 0.00 0.00 3.46
3742 4333 1.197721 GAGCGTGTTGTCATTGGAAGG 59.802 52.381 0.00 0.00 0.00 3.46
3743 4334 0.387239 GCGTGTTGTCATTGGAAGGC 60.387 55.000 0.00 0.00 0.00 4.35
3744 4335 0.950836 CGTGTTGTCATTGGAAGGCA 59.049 50.000 0.00 0.00 0.00 4.75
3745 4336 1.541147 CGTGTTGTCATTGGAAGGCAT 59.459 47.619 0.00 0.00 0.00 4.40
3746 4337 2.669113 CGTGTTGTCATTGGAAGGCATG 60.669 50.000 0.00 0.00 0.00 4.06
3747 4338 1.894466 TGTTGTCATTGGAAGGCATGG 59.106 47.619 0.00 0.00 0.00 3.66
3748 4339 0.896923 TTGTCATTGGAAGGCATGGC 59.103 50.000 12.14 12.14 0.00 4.40
3749 4340 0.251698 TGTCATTGGAAGGCATGGCA 60.252 50.000 22.64 0.00 32.54 4.92
3750 4341 0.458669 GTCATTGGAAGGCATGGCAG 59.541 55.000 22.64 2.22 0.00 4.85
3751 4342 1.143183 CATTGGAAGGCATGGCAGC 59.857 57.895 22.64 12.21 0.00 5.25
3752 4343 1.305465 ATTGGAAGGCATGGCAGCA 60.305 52.632 22.64 0.45 35.83 4.41
3753 4344 0.689745 ATTGGAAGGCATGGCAGCAT 60.690 50.000 22.64 4.26 35.83 3.79
3754 4345 1.324740 TTGGAAGGCATGGCAGCATC 61.325 55.000 22.64 13.03 35.83 3.91
3755 4346 1.455217 GGAAGGCATGGCAGCATCT 60.455 57.895 22.64 0.00 35.83 2.90
3756 4347 1.041447 GGAAGGCATGGCAGCATCTT 61.041 55.000 22.64 5.40 35.83 2.40
3757 4348 0.384669 GAAGGCATGGCAGCATCTTC 59.615 55.000 22.64 11.18 35.83 2.87
3758 4349 1.381928 AAGGCATGGCAGCATCTTCG 61.382 55.000 22.64 0.00 35.83 3.79
3759 4350 2.025727 GCATGGCAGCATCTTCGC 59.974 61.111 0.00 0.00 0.00 4.70
3760 4351 2.719979 CATGGCAGCATCTTCGCC 59.280 61.111 0.00 0.00 46.43 5.54
3763 4354 4.462394 GGCAGCATCTTCGCCATA 57.538 55.556 0.00 0.00 45.52 2.74
3764 4355 2.242113 GGCAGCATCTTCGCCATAG 58.758 57.895 0.00 0.00 45.52 2.23
3765 4356 0.533755 GGCAGCATCTTCGCCATAGT 60.534 55.000 0.00 0.00 45.52 2.12
3766 4357 0.864455 GCAGCATCTTCGCCATAGTC 59.136 55.000 0.00 0.00 0.00 2.59
3767 4358 1.807755 GCAGCATCTTCGCCATAGTCA 60.808 52.381 0.00 0.00 0.00 3.41
3768 4359 2.133553 CAGCATCTTCGCCATAGTCAG 58.866 52.381 0.00 0.00 0.00 3.51
3769 4360 1.759445 AGCATCTTCGCCATAGTCAGT 59.241 47.619 0.00 0.00 0.00 3.41
3770 4361 2.131183 GCATCTTCGCCATAGTCAGTC 58.869 52.381 0.00 0.00 0.00 3.51
3771 4362 2.481969 GCATCTTCGCCATAGTCAGTCA 60.482 50.000 0.00 0.00 0.00 3.41
3772 4363 2.941453 TCTTCGCCATAGTCAGTCAC 57.059 50.000 0.00 0.00 0.00 3.67
3773 4364 1.476891 TCTTCGCCATAGTCAGTCACC 59.523 52.381 0.00 0.00 0.00 4.02
3774 4365 1.204704 CTTCGCCATAGTCAGTCACCA 59.795 52.381 0.00 0.00 0.00 4.17
3775 4366 1.485124 TCGCCATAGTCAGTCACCAT 58.515 50.000 0.00 0.00 0.00 3.55
3776 4367 1.136891 TCGCCATAGTCAGTCACCATG 59.863 52.381 0.00 0.00 0.00 3.66
3777 4368 1.807755 CGCCATAGTCAGTCACCATGG 60.808 57.143 11.19 11.19 39.35 3.66
3778 4369 1.475751 GCCATAGTCAGTCACCATGGG 60.476 57.143 18.09 5.22 37.27 4.00
3779 4370 1.839994 CCATAGTCAGTCACCATGGGT 59.160 52.381 18.09 0.00 35.62 4.51
3780 4371 2.239654 CCATAGTCAGTCACCATGGGTT 59.760 50.000 18.09 0.00 31.02 4.11
3781 4372 3.308402 CCATAGTCAGTCACCATGGGTTT 60.308 47.826 18.09 0.00 31.02 3.27
3782 4373 2.276732 AGTCAGTCACCATGGGTTTG 57.723 50.000 18.09 5.51 31.02 2.93
3783 4374 1.202927 AGTCAGTCACCATGGGTTTGG 60.203 52.381 18.09 2.52 42.82 3.28
3784 4375 0.112218 TCAGTCACCATGGGTTTGGG 59.888 55.000 18.09 0.79 41.35 4.12
3785 4376 0.112218 CAGTCACCATGGGTTTGGGA 59.888 55.000 18.09 0.55 41.35 4.37
3786 4377 0.405585 AGTCACCATGGGTTTGGGAG 59.594 55.000 18.09 0.00 41.35 4.30
3787 4378 0.611896 GTCACCATGGGTTTGGGAGG 60.612 60.000 18.09 0.00 41.35 4.30
3788 4379 0.774096 TCACCATGGGTTTGGGAGGA 60.774 55.000 18.09 0.00 41.35 3.71
3789 4380 0.323725 CACCATGGGTTTGGGAGGAG 60.324 60.000 18.09 0.00 41.35 3.69
3790 4381 0.477597 ACCATGGGTTTGGGAGGAGA 60.478 55.000 18.09 0.00 41.35 3.71
3791 4382 0.704076 CCATGGGTTTGGGAGGAGAA 59.296 55.000 2.85 0.00 32.80 2.87
3792 4383 1.616994 CCATGGGTTTGGGAGGAGAAC 60.617 57.143 2.85 0.00 32.80 3.01
3793 4384 0.704664 ATGGGTTTGGGAGGAGAACC 59.295 55.000 0.00 0.00 41.60 3.62
3794 4385 0.699577 TGGGTTTGGGAGGAGAACCA 60.700 55.000 6.80 0.00 43.59 3.67
3795 4386 0.038310 GGGTTTGGGAGGAGAACCAG 59.962 60.000 6.80 0.00 43.59 4.00
3796 4387 0.038310 GGTTTGGGAGGAGAACCAGG 59.962 60.000 0.00 0.00 41.86 4.45
3797 4388 0.771755 GTTTGGGAGGAGAACCAGGT 59.228 55.000 0.00 0.00 38.16 4.00
3798 4389 1.982958 GTTTGGGAGGAGAACCAGGTA 59.017 52.381 0.00 0.00 38.16 3.08
3799 4390 2.576648 GTTTGGGAGGAGAACCAGGTAT 59.423 50.000 0.00 0.00 38.16 2.73
3800 4391 2.661176 TGGGAGGAGAACCAGGTATT 57.339 50.000 0.00 0.00 38.94 1.89
3801 4392 2.196595 TGGGAGGAGAACCAGGTATTG 58.803 52.381 0.00 0.00 38.94 1.90
3802 4393 2.225779 TGGGAGGAGAACCAGGTATTGA 60.226 50.000 0.00 0.00 38.94 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
182 189 1.633945 AGATTTTAAGTGCCCGGACCT 59.366 47.619 0.73 0.00 0.00 3.85
185 193 2.039216 TGTGAGATTTTAAGTGCCCGGA 59.961 45.455 0.73 0.00 0.00 5.14
233 241 2.884320 ACAAATTGGGTTACTGGGTCC 58.116 47.619 0.00 0.00 0.00 4.46
249 257 3.833650 TCCCGACATCCTTGTAGTACAAA 59.166 43.478 16.26 3.68 37.69 2.83
252 260 3.022406 ACTCCCGACATCCTTGTAGTAC 58.978 50.000 0.00 0.00 35.79 2.73
253 261 3.377253 ACTCCCGACATCCTTGTAGTA 57.623 47.619 0.00 0.00 35.79 1.82
254 262 2.233305 ACTCCCGACATCCTTGTAGT 57.767 50.000 0.00 0.00 35.79 2.73
255 263 2.418746 CCAACTCCCGACATCCTTGTAG 60.419 54.545 0.00 0.00 35.79 2.74
256 264 1.553248 CCAACTCCCGACATCCTTGTA 59.447 52.381 0.00 0.00 35.79 2.41
285 293 4.736126 TGGTATATATCCACATCCTGCG 57.264 45.455 0.00 0.00 0.00 5.18
507 522 2.071540 AGCTTTACTTCGCGGGTAAAC 58.928 47.619 23.61 20.44 35.20 2.01
509 524 1.717194 CAGCTTTACTTCGCGGGTAA 58.283 50.000 17.01 17.01 0.00 2.85
511 526 2.033194 GCAGCTTTACTTCGCGGGT 61.033 57.895 6.13 8.65 0.00 5.28
512 527 2.785258 GCAGCTTTACTTCGCGGG 59.215 61.111 6.13 1.80 0.00 6.13
514 529 2.395690 CCGCAGCTTTACTTCGCG 59.604 61.111 0.00 0.00 45.25 5.87
516 531 2.785258 GGCCGCAGCTTTACTTCG 59.215 61.111 0.00 0.00 39.73 3.79
518 533 2.746277 CCGGCCGCAGCTTTACTT 60.746 61.111 22.85 0.00 39.73 2.24
520 535 4.770874 TCCCGGCCGCAGCTTTAC 62.771 66.667 22.85 0.00 39.73 2.01
521 536 3.969250 CTTCCCGGCCGCAGCTTTA 62.969 63.158 22.85 0.00 39.73 1.85
530 545 4.803908 CTTGCTCCCTTCCCGGCC 62.804 72.222 0.00 0.00 0.00 6.13
531 546 3.689002 CTCTTGCTCCCTTCCCGGC 62.689 68.421 0.00 0.00 0.00 6.13
532 547 2.586792 CTCTTGCTCCCTTCCCGG 59.413 66.667 0.00 0.00 0.00 5.73
533 548 2.124942 GCTCTTGCTCCCTTCCCG 60.125 66.667 0.00 0.00 36.03 5.14
534 549 0.839946 TATGCTCTTGCTCCCTTCCC 59.160 55.000 0.00 0.00 40.48 3.97
535 550 1.475930 GGTATGCTCTTGCTCCCTTCC 60.476 57.143 0.00 0.00 40.48 3.46
536 551 1.488393 AGGTATGCTCTTGCTCCCTTC 59.512 52.381 0.00 0.00 40.48 3.46
537 552 1.589414 AGGTATGCTCTTGCTCCCTT 58.411 50.000 0.00 0.00 40.48 3.95
538 553 1.211457 CAAGGTATGCTCTTGCTCCCT 59.789 52.381 0.00 0.00 40.48 4.20
539 554 1.210478 TCAAGGTATGCTCTTGCTCCC 59.790 52.381 7.01 0.00 40.82 4.30
540 555 2.698855 TCAAGGTATGCTCTTGCTCC 57.301 50.000 7.01 0.00 40.82 4.70
541 556 4.954875 ACTATCAAGGTATGCTCTTGCTC 58.045 43.478 7.01 0.00 40.82 4.26
542 557 5.363939 GAACTATCAAGGTATGCTCTTGCT 58.636 41.667 7.01 2.06 40.82 3.91
543 558 4.210120 CGAACTATCAAGGTATGCTCTTGC 59.790 45.833 7.01 0.00 40.82 4.01
544 559 5.592054 TCGAACTATCAAGGTATGCTCTTG 58.408 41.667 5.92 5.92 41.99 3.02
545 560 5.854010 TCGAACTATCAAGGTATGCTCTT 57.146 39.130 0.00 0.00 0.00 2.85
546 561 5.536538 TCATCGAACTATCAAGGTATGCTCT 59.463 40.000 0.00 0.00 0.00 4.09
564 579 2.355445 GACAGGCGCAGGATCATCGA 62.355 60.000 10.83 0.00 0.00 3.59
567 582 2.107750 CGACAGGCGCAGGATCAT 59.892 61.111 10.83 0.00 0.00 2.45
580 595 4.682334 TACGGGAGCCCCACGACA 62.682 66.667 5.32 0.00 45.83 4.35
652 694 0.597377 CCCTTTTCAGCGGCAACAAC 60.597 55.000 1.45 0.00 0.00 3.32
694 736 3.634448 TCGGGCTTTCTCATCAACAAAAA 59.366 39.130 0.00 0.00 0.00 1.94
695 737 3.218453 TCGGGCTTTCTCATCAACAAAA 58.782 40.909 0.00 0.00 0.00 2.44
696 738 2.857483 TCGGGCTTTCTCATCAACAAA 58.143 42.857 0.00 0.00 0.00 2.83
697 739 2.559698 TCGGGCTTTCTCATCAACAA 57.440 45.000 0.00 0.00 0.00 2.83
698 740 2.559698 TTCGGGCTTTCTCATCAACA 57.440 45.000 0.00 0.00 0.00 3.33
700 742 3.191162 CACAATTCGGGCTTTCTCATCAA 59.809 43.478 0.00 0.00 0.00 2.57
701 743 2.749076 CACAATTCGGGCTTTCTCATCA 59.251 45.455 0.00 0.00 0.00 3.07
704 746 2.270352 ACACAATTCGGGCTTTCTCA 57.730 45.000 0.00 0.00 0.00 3.27
706 748 2.073816 CGTACACAATTCGGGCTTTCT 58.926 47.619 0.00 0.00 0.00 2.52
707 749 1.129811 CCGTACACAATTCGGGCTTTC 59.870 52.381 0.00 0.00 40.49 2.62
708 750 1.161843 CCGTACACAATTCGGGCTTT 58.838 50.000 0.00 0.00 40.49 3.51
709 751 2.849081 CCGTACACAATTCGGGCTT 58.151 52.632 0.00 0.00 40.49 4.35
710 752 4.609995 CCGTACACAATTCGGGCT 57.390 55.556 0.00 0.00 40.49 5.19
714 756 0.390603 TGGCTCCCGTACACAATTCG 60.391 55.000 0.00 0.00 0.00 3.34
716 758 1.349688 TCTTGGCTCCCGTACACAATT 59.650 47.619 0.00 0.00 0.00 2.32
718 760 0.759959 TTCTTGGCTCCCGTACACAA 59.240 50.000 0.00 0.00 0.00 3.33
719 761 0.759959 TTTCTTGGCTCCCGTACACA 59.240 50.000 0.00 0.00 0.00 3.72
721 763 2.642154 TTTTTCTTGGCTCCCGTACA 57.358 45.000 0.00 0.00 0.00 2.90
741 783 3.427573 CCCGTTTACTTCCCCTCATTTT 58.572 45.455 0.00 0.00 0.00 1.82
742 784 2.291346 CCCCGTTTACTTCCCCTCATTT 60.291 50.000 0.00 0.00 0.00 2.32
743 785 1.283905 CCCCGTTTACTTCCCCTCATT 59.716 52.381 0.00 0.00 0.00 2.57
744 786 0.916809 CCCCGTTTACTTCCCCTCAT 59.083 55.000 0.00 0.00 0.00 2.90
745 787 1.844544 GCCCCGTTTACTTCCCCTCA 61.845 60.000 0.00 0.00 0.00 3.86
746 788 1.077930 GCCCCGTTTACTTCCCCTC 60.078 63.158 0.00 0.00 0.00 4.30
747 789 1.540617 AGCCCCGTTTACTTCCCCT 60.541 57.895 0.00 0.00 0.00 4.79
753 795 4.043100 GGCCCAGCCCCGTTTACT 62.043 66.667 0.00 0.00 44.06 2.24
788 840 0.918983 TCAGTTAGGCCCCATTGGAG 59.081 55.000 3.62 0.00 35.39 3.86
795 847 1.346068 CTGAGCTATCAGTTAGGCCCC 59.654 57.143 0.00 0.00 46.68 5.80
812 864 3.207778 CCGGAAATATTAAACGGGCTGA 58.792 45.455 14.27 0.00 40.79 4.26
874 933 5.220931 CCTTTCTTCCTTGTGACTTGTGAAG 60.221 44.000 0.00 0.00 0.00 3.02
875 934 4.640201 CCTTTCTTCCTTGTGACTTGTGAA 59.360 41.667 0.00 0.00 0.00 3.18
877 936 4.199310 TCCTTTCTTCCTTGTGACTTGTG 58.801 43.478 0.00 0.00 0.00 3.33
878 937 4.503714 TCCTTTCTTCCTTGTGACTTGT 57.496 40.909 0.00 0.00 0.00 3.16
879 938 5.997746 TGTATCCTTTCTTCCTTGTGACTTG 59.002 40.000 0.00 0.00 0.00 3.16
880 939 6.187727 TGTATCCTTTCTTCCTTGTGACTT 57.812 37.500 0.00 0.00 0.00 3.01
881 940 5.280215 CCTGTATCCTTTCTTCCTTGTGACT 60.280 44.000 0.00 0.00 0.00 3.41
882 941 4.938226 CCTGTATCCTTTCTTCCTTGTGAC 59.062 45.833 0.00 0.00 0.00 3.67
905 964 2.607750 TGGTGTGGCCCTCTCTCC 60.608 66.667 0.00 0.00 36.04 3.71
951 1027 0.665369 GTTTCGCTCGTCGGAGGAAA 60.665 55.000 1.73 0.00 40.80 3.13
1035 1112 2.203640 AGTGTCCTCTGCGTCCCA 60.204 61.111 0.00 0.00 0.00 4.37
1061 1138 0.478942 AGATCGGAGGAATCGGGAGA 59.521 55.000 0.00 0.00 46.90 3.71
1083 1160 1.147817 ACAGACAAGCAAGGGGGAAAT 59.852 47.619 0.00 0.00 0.00 2.17
1134 1211 3.934962 GAGCCTCTGGATCGGGCC 61.935 72.222 12.00 0.00 46.31 5.80
1196 1274 2.844362 CCCTAGATCCGCCCAGCA 60.844 66.667 0.00 0.00 0.00 4.41
1199 1277 1.459539 CTTCCCCTAGATCCGCCCA 60.460 63.158 0.00 0.00 0.00 5.36
1215 1293 0.196118 TCCTCTCCCCCTTGTTCCTT 59.804 55.000 0.00 0.00 0.00 3.36
1216 1294 0.196118 TTCCTCTCCCCCTTGTTCCT 59.804 55.000 0.00 0.00 0.00 3.36
1231 1309 2.876581 CTGGCAAAACCCTAGTTTCCT 58.123 47.619 0.00 0.00 45.54 3.36
1258 1336 4.055360 CCCACATCGCATTCTAAATCGTA 58.945 43.478 0.00 0.00 0.00 3.43
1295 1373 0.179124 CTCCGCTAGCAGGTTCTCAC 60.179 60.000 16.45 0.00 0.00 3.51
1358 1436 5.126222 TCCATGAGTTGAGACTAACTAGCAG 59.874 44.000 0.00 0.00 40.78 4.24
1360 1438 5.584253 TCCATGAGTTGAGACTAACTAGC 57.416 43.478 0.00 0.00 40.78 3.42
1381 1487 4.212214 GGTTCGTCATGAGCTGGAATATTC 59.788 45.833 6.93 6.93 0.00 1.75
1382 1488 4.130118 GGTTCGTCATGAGCTGGAATATT 58.870 43.478 0.00 0.00 0.00 1.28
1383 1489 3.134623 TGGTTCGTCATGAGCTGGAATAT 59.865 43.478 0.00 0.00 0.00 1.28
1384 1490 2.499693 TGGTTCGTCATGAGCTGGAATA 59.500 45.455 0.00 0.00 0.00 1.75
1385 1491 1.278985 TGGTTCGTCATGAGCTGGAAT 59.721 47.619 0.00 0.00 0.00 3.01
1386 1492 0.684535 TGGTTCGTCATGAGCTGGAA 59.315 50.000 0.00 0.00 0.00 3.53
1387 1493 0.247460 CTGGTTCGTCATGAGCTGGA 59.753 55.000 0.00 0.00 0.00 3.86
1388 1494 1.364626 GCTGGTTCGTCATGAGCTGG 61.365 60.000 0.00 0.00 0.00 4.85
1389 1495 1.364626 GGCTGGTTCGTCATGAGCTG 61.365 60.000 0.00 0.00 0.00 4.24
1390 1496 1.078848 GGCTGGTTCGTCATGAGCT 60.079 57.895 0.00 0.00 0.00 4.09
1391 1497 2.109126 GGGCTGGTTCGTCATGAGC 61.109 63.158 0.00 0.00 0.00 4.26
1392 1498 0.321564 TTGGGCTGGTTCGTCATGAG 60.322 55.000 0.00 0.00 0.00 2.90
1393 1499 0.605319 GTTGGGCTGGTTCGTCATGA 60.605 55.000 0.00 0.00 0.00 3.07
1394 1500 0.888736 TGTTGGGCTGGTTCGTCATG 60.889 55.000 0.00 0.00 0.00 3.07
1395 1501 0.606401 CTGTTGGGCTGGTTCGTCAT 60.606 55.000 0.00 0.00 0.00 3.06
1396 1502 1.227823 CTGTTGGGCTGGTTCGTCA 60.228 57.895 0.00 0.00 0.00 4.35
1397 1503 0.818040 AACTGTTGGGCTGGTTCGTC 60.818 55.000 0.00 0.00 0.00 4.20
1398 1504 0.470766 TAACTGTTGGGCTGGTTCGT 59.529 50.000 2.69 0.00 0.00 3.85
1399 1505 0.872388 GTAACTGTTGGGCTGGTTCG 59.128 55.000 2.69 0.00 0.00 3.95
1434 1540 9.190858 TGATAACAAGTTCACACAAATAAATGC 57.809 29.630 0.00 0.00 0.00 3.56
1448 1639 7.800380 CAGACAACAAGATGTGATAACAAGTTC 59.200 37.037 0.00 0.00 32.57 3.01
1509 1851 3.901844 AGAAGCTCCTGTACTAACACCAA 59.098 43.478 0.00 0.00 0.00 3.67
1521 1863 4.796946 GCTGATACAGATGAGAAGCTCCTG 60.797 50.000 2.81 0.00 32.44 3.86
1524 1866 4.589216 AGCTGATACAGATGAGAAGCTC 57.411 45.455 2.81 0.00 34.56 4.09
1539 1881 3.053693 TGGGCTGGTTAACATAAGCTGAT 60.054 43.478 20.06 0.00 35.93 2.90
1625 1974 8.945481 TGGCCAATGAATGTATTTTGATAAAG 57.055 30.769 0.61 0.00 0.00 1.85
1629 1979 6.949715 ACTTGGCCAATGAATGTATTTTGAT 58.050 32.000 20.85 0.00 0.00 2.57
1647 1997 1.202891 ACACTAAGGGGACAACTTGGC 60.203 52.381 0.00 0.00 30.52 4.52
1693 2044 9.730420 ATGTACAAATTTACTGAAAGACACAAC 57.270 29.630 0.00 0.00 37.43 3.32
1717 2074 4.863152 TCATGAGTTAATCACGTGCATG 57.137 40.909 18.31 18.31 41.91 4.06
1754 2113 2.356125 CCAGTCACATAAGGGTTCCTGG 60.356 54.545 0.00 0.00 32.13 4.45
1827 2186 5.145564 AGAAGTGACAACTAACCTCCAGTA 58.854 41.667 0.00 0.00 34.77 2.74
1874 2240 4.755266 ATATAATGACCTCCATACCGCC 57.245 45.455 0.00 0.00 34.45 6.13
1885 2251 7.012327 TGCAGCACAAGAAAGTATATAATGACC 59.988 37.037 0.00 0.00 0.00 4.02
1905 2272 2.749584 CCCATAGGAGGCTGCAGCA 61.750 63.158 37.63 19.39 37.98 4.41
1906 2273 2.112718 CCCATAGGAGGCTGCAGC 59.887 66.667 30.88 30.88 36.10 5.25
1907 2274 1.340399 TGACCCATAGGAGGCTGCAG 61.340 60.000 10.11 10.11 36.73 4.41
1961 2328 1.463674 AAGGCTATGCTTTCCAACCG 58.536 50.000 0.00 0.00 0.00 4.44
2068 2435 5.176741 AGCAGAGAGAAGGAAAACATGAT 57.823 39.130 0.00 0.00 0.00 2.45
2096 2466 7.341030 AGTGAATGAAGATGTCACATGGATTA 58.659 34.615 0.00 0.00 43.34 1.75
2117 2487 8.631797 TGATCATTCAAACTGAAAATGAAGTGA 58.368 29.630 0.00 0.00 41.34 3.41
2118 2488 8.806177 TGATCATTCAAACTGAAAATGAAGTG 57.194 30.769 0.00 0.00 41.34 3.16
2124 2495 9.811995 CCACATATGATCATTCAAACTGAAAAT 57.188 29.630 14.65 0.00 40.12 1.82
2326 2702 4.387256 GCAGCAGTAAGAAGAACAGTACTG 59.613 45.833 21.44 21.44 44.07 2.74
2339 2719 0.517316 GACAAACCGGCAGCAGTAAG 59.483 55.000 0.00 0.00 0.00 2.34
2367 2747 8.587952 AACAACAACAAAAATAGGCATAAGAC 57.412 30.769 0.00 0.00 0.00 3.01
2379 2759 7.872993 TCATGTTAACCTGAACAACAACAAAAA 59.127 29.630 10.71 0.00 42.39 1.94
2383 2763 6.707440 ATCATGTTAACCTGAACAACAACA 57.293 33.333 16.12 0.00 42.39 3.33
2384 2764 6.420604 CCAATCATGTTAACCTGAACAACAAC 59.579 38.462 16.12 0.00 42.39 3.32
2388 2768 6.773200 TGTACCAATCATGTTAACCTGAACAA 59.227 34.615 16.12 0.00 42.39 2.83
2613 3012 2.159824 GCCAAACTTTCTTCTAGGCGAC 59.840 50.000 0.00 0.00 0.00 5.19
2674 3076 2.629137 TGGCAATCTGTCATGCAAAAGT 59.371 40.909 0.00 0.00 44.32 2.66
2736 3147 0.401395 ACCCCCAGTTGGTCTTCAGA 60.401 55.000 0.00 0.00 0.00 3.27
2813 3240 2.842208 CACAGTTTGCTTCGTTTCCA 57.158 45.000 0.00 0.00 0.00 3.53
2884 3313 4.002982 TGTCATACAGAGCAAATGTGGAC 58.997 43.478 11.87 11.87 37.08 4.02
2927 3356 5.644636 TCAACCTTAAACGTTCACAAAGACT 59.355 36.000 0.00 0.00 0.00 3.24
2928 3357 5.871539 TCAACCTTAAACGTTCACAAAGAC 58.128 37.500 0.00 0.00 0.00 3.01
2930 3359 6.725246 AGATCAACCTTAAACGTTCACAAAG 58.275 36.000 0.00 3.62 0.00 2.77
2931 3360 6.687081 AGATCAACCTTAAACGTTCACAAA 57.313 33.333 0.00 0.00 0.00 2.83
2949 3378 5.761726 GGCATCATCATACAAGACAAGATCA 59.238 40.000 0.00 0.00 0.00 2.92
2984 3413 1.903877 CGGCCACTCCAGATTGACCT 61.904 60.000 2.24 0.00 34.01 3.85
2986 3415 0.460987 CTCGGCCACTCCAGATTGAC 60.461 60.000 2.24 0.00 34.01 3.18
3017 3454 2.207924 AAGTCGAAGGGAGCACGGT 61.208 57.895 0.00 0.00 0.00 4.83
3019 3456 0.600255 AACAAGTCGAAGGGAGCACG 60.600 55.000 0.00 0.00 0.00 5.34
3020 3457 1.594331 AAACAAGTCGAAGGGAGCAC 58.406 50.000 0.00 0.00 0.00 4.40
3021 3458 1.946768 CAAAACAAGTCGAAGGGAGCA 59.053 47.619 0.00 0.00 0.00 4.26
3022 3459 1.266989 CCAAAACAAGTCGAAGGGAGC 59.733 52.381 0.00 0.00 0.00 4.70
3024 3461 1.133915 AGCCAAAACAAGTCGAAGGGA 60.134 47.619 0.00 0.00 0.00 4.20
3026 3463 1.600413 GCAGCCAAAACAAGTCGAAGG 60.600 52.381 0.00 0.00 0.00 3.46
3029 3466 1.452145 GGGCAGCCAAAACAAGTCGA 61.452 55.000 15.19 0.00 0.00 4.20
3080 3522 9.440784 GACAAGTGACGTGAACAAATTATTTTA 57.559 29.630 5.34 0.00 0.00 1.52
3097 3539 1.828331 GCCAACGACCGACAAGTGAC 61.828 60.000 0.00 0.00 0.00 3.67
3098 3540 1.593209 GCCAACGACCGACAAGTGA 60.593 57.895 0.00 0.00 0.00 3.41
3099 3541 1.157870 AAGCCAACGACCGACAAGTG 61.158 55.000 0.00 0.00 0.00 3.16
3100 3542 1.145377 AAGCCAACGACCGACAAGT 59.855 52.632 0.00 0.00 0.00 3.16
3101 3543 1.157870 ACAAGCCAACGACCGACAAG 61.158 55.000 0.00 0.00 0.00 3.16
3102 3544 0.745128 AACAAGCCAACGACCGACAA 60.745 50.000 0.00 0.00 0.00 3.18
3103 3545 1.153329 AACAAGCCAACGACCGACA 60.153 52.632 0.00 0.00 0.00 4.35
3104 3546 1.278637 CAACAAGCCAACGACCGAC 59.721 57.895 0.00 0.00 0.00 4.79
3105 3547 2.539338 GCAACAAGCCAACGACCGA 61.539 57.895 0.00 0.00 37.23 4.69
3106 3548 2.051345 GCAACAAGCCAACGACCG 60.051 61.111 0.00 0.00 37.23 4.79
3107 3549 0.387239 GATGCAACAAGCCAACGACC 60.387 55.000 0.00 0.00 44.83 4.79
3108 3550 0.725784 CGATGCAACAAGCCAACGAC 60.726 55.000 0.00 0.00 44.83 4.34
3109 3551 1.163420 ACGATGCAACAAGCCAACGA 61.163 50.000 0.00 0.00 44.83 3.85
3110 3552 0.317770 AACGATGCAACAAGCCAACG 60.318 50.000 0.00 0.00 44.83 4.10
3111 3553 1.268999 TGAACGATGCAACAAGCCAAC 60.269 47.619 0.00 0.00 44.83 3.77
3112 3554 1.028130 TGAACGATGCAACAAGCCAA 58.972 45.000 0.00 0.00 44.83 4.52
3113 3555 0.310543 GTGAACGATGCAACAAGCCA 59.689 50.000 0.00 0.00 44.83 4.75
3114 3556 0.387239 GGTGAACGATGCAACAAGCC 60.387 55.000 0.00 0.00 44.83 4.35
3115 3557 0.310543 TGGTGAACGATGCAACAAGC 59.689 50.000 0.00 0.00 45.96 4.01
3116 3558 2.772568 TTGGTGAACGATGCAACAAG 57.227 45.000 0.00 0.00 37.98 3.16
3117 3559 2.685388 TCTTTGGTGAACGATGCAACAA 59.315 40.909 0.00 0.00 40.87 2.83
3118 3560 2.293170 TCTTTGGTGAACGATGCAACA 58.707 42.857 0.00 0.00 0.00 3.33
3119 3561 3.058293 TGATCTTTGGTGAACGATGCAAC 60.058 43.478 0.00 0.00 0.00 4.17
3120 3562 3.058293 GTGATCTTTGGTGAACGATGCAA 60.058 43.478 0.00 0.00 0.00 4.08
3121 3563 2.483877 GTGATCTTTGGTGAACGATGCA 59.516 45.455 0.00 0.00 0.00 3.96
3122 3564 2.159517 GGTGATCTTTGGTGAACGATGC 60.160 50.000 0.00 0.00 0.00 3.91
3123 3565 3.073678 TGGTGATCTTTGGTGAACGATG 58.926 45.455 0.00 0.00 0.00 3.84
3124 3566 3.417069 TGGTGATCTTTGGTGAACGAT 57.583 42.857 0.00 0.00 0.00 3.73
3125 3567 2.920724 TGGTGATCTTTGGTGAACGA 57.079 45.000 0.00 0.00 0.00 3.85
3126 3568 2.162208 CCATGGTGATCTTTGGTGAACG 59.838 50.000 2.57 0.00 0.00 3.95
3127 3569 3.157087 ACCATGGTGATCTTTGGTGAAC 58.843 45.455 18.99 0.00 40.87 3.18
3128 3570 3.524095 ACCATGGTGATCTTTGGTGAA 57.476 42.857 18.99 0.00 40.87 3.18
3176 3618 4.932200 CCTGGTTCTTGCTCTAGTTTGTAG 59.068 45.833 0.00 0.00 0.00 2.74
3182 3624 1.552792 GAGCCTGGTTCTTGCTCTAGT 59.447 52.381 2.97 0.00 46.19 2.57
3194 3636 2.681778 CTGTCGAGGGAGCCTGGT 60.682 66.667 0.00 0.00 31.76 4.00
3195 3637 2.286523 AACTGTCGAGGGAGCCTGG 61.287 63.158 0.00 0.00 31.76 4.45
3199 3641 1.301716 TTGCAACTGTCGAGGGAGC 60.302 57.895 0.00 0.00 0.00 4.70
3201 3643 0.179234 TTGTTGCAACTGTCGAGGGA 59.821 50.000 28.61 3.73 0.00 4.20
3207 3649 4.976116 GGTGTATCTTTTGTTGCAACTGTC 59.024 41.667 28.61 4.42 0.00 3.51
3209 3651 4.930963 TGGTGTATCTTTTGTTGCAACTG 58.069 39.130 28.61 16.21 0.00 3.16
3210 3652 5.789643 ATGGTGTATCTTTTGTTGCAACT 57.210 34.783 28.61 11.24 0.00 3.16
3211 3653 5.333263 GCAATGGTGTATCTTTTGTTGCAAC 60.333 40.000 22.83 22.83 40.13 4.17
3212 3654 4.749099 GCAATGGTGTATCTTTTGTTGCAA 59.251 37.500 0.00 0.00 40.13 4.08
3213 3655 4.305769 GCAATGGTGTATCTTTTGTTGCA 58.694 39.130 0.00 0.00 40.13 4.08
3214 3656 3.679502 GGCAATGGTGTATCTTTTGTTGC 59.320 43.478 0.00 0.00 39.78 4.17
3260 3702 2.288763 ACCACGCATGTTCCAAATTTCC 60.289 45.455 0.00 0.00 0.00 3.13
3278 3720 5.540337 AGATGTTACTCAGAAGAGAACACCA 59.460 40.000 0.00 0.00 44.98 4.17
3293 3735 6.045072 TCCAATTTGACGGTAGATGTTACT 57.955 37.500 0.00 0.00 0.00 2.24
3327 3886 2.766313 TCTGTTTTCCATGACAGACGG 58.234 47.619 10.13 2.32 45.26 4.79
3342 3901 5.511888 CCAATTTTCAGCATCCCTTTCTGTT 60.512 40.000 0.00 0.00 0.00 3.16
3351 3913 5.075858 TGTGATTCCAATTTTCAGCATCC 57.924 39.130 0.00 0.00 0.00 3.51
3365 3927 4.757149 AGTAGCAAGTTCTGTTGTGATTCC 59.243 41.667 0.00 0.00 0.00 3.01
3366 3928 5.466728 TGAGTAGCAAGTTCTGTTGTGATTC 59.533 40.000 0.00 0.00 0.00 2.52
3398 3960 4.573900 TGCCTTCTCTGAAATTCTCACTC 58.426 43.478 0.00 0.00 0.00 3.51
3427 3989 1.228793 CAACAACCCTGGGTGGTGA 59.771 57.895 26.53 0.00 39.24 4.02
3471 4058 4.513406 TTTAACACCAGACAGTTTCCCT 57.487 40.909 0.00 0.00 0.00 4.20
3472 4059 5.585820 TTTTTAACACCAGACAGTTTCCC 57.414 39.130 0.00 0.00 0.00 3.97
3492 4079 3.625313 CCCTTTGAACAACGGCAATTTTT 59.375 39.130 4.82 0.00 0.00 1.94
3493 4080 3.202097 CCCTTTGAACAACGGCAATTTT 58.798 40.909 4.82 0.00 0.00 1.82
3494 4081 2.169561 ACCCTTTGAACAACGGCAATTT 59.830 40.909 4.82 0.00 0.00 1.82
3495 4082 1.760029 ACCCTTTGAACAACGGCAATT 59.240 42.857 4.82 0.00 0.00 2.32
3496 4083 1.408969 ACCCTTTGAACAACGGCAAT 58.591 45.000 4.82 0.00 0.00 3.56
3497 4084 2.054232 TACCCTTTGAACAACGGCAA 57.946 45.000 4.82 0.00 0.00 4.52
3498 4085 2.279935 ATACCCTTTGAACAACGGCA 57.720 45.000 4.82 0.00 0.00 5.69
3525 4116 6.761242 AGTACAATTGCAGACGCTCATATAAA 59.239 34.615 5.05 0.00 39.64 1.40
3529 4120 4.123497 AGTACAATTGCAGACGCTCATA 57.877 40.909 5.05 0.00 39.64 2.15
3530 4121 2.977914 AGTACAATTGCAGACGCTCAT 58.022 42.857 5.05 0.00 39.64 2.90
3590 4181 7.371936 AGGATCATAGACGCTTAGTTGTTATC 58.628 38.462 0.00 0.00 0.00 1.75
3591 4182 7.291411 AGGATCATAGACGCTTAGTTGTTAT 57.709 36.000 0.00 0.00 0.00 1.89
3605 4196 6.968263 AAAGAGATCAACGAGGATCATAGA 57.032 37.500 18.40 0.00 44.89 1.98
3606 4197 7.040062 AGGTAAAGAGATCAACGAGGATCATAG 60.040 40.741 18.40 0.00 44.89 2.23
3607 4198 6.778069 AGGTAAAGAGATCAACGAGGATCATA 59.222 38.462 18.40 7.39 44.89 2.15
3608 4199 5.600484 AGGTAAAGAGATCAACGAGGATCAT 59.400 40.000 18.40 7.86 44.89 2.45
3609 4200 4.956700 AGGTAAAGAGATCAACGAGGATCA 59.043 41.667 18.40 0.85 44.89 2.92
3610 4201 5.508320 GGAGGTAAAGAGATCAACGAGGATC 60.508 48.000 11.42 11.42 43.21 3.36
3611 4202 4.342665 GGAGGTAAAGAGATCAACGAGGAT 59.657 45.833 0.00 0.00 0.00 3.24
3612 4203 3.700038 GGAGGTAAAGAGATCAACGAGGA 59.300 47.826 0.00 0.00 0.00 3.71
3613 4204 3.181474 GGGAGGTAAAGAGATCAACGAGG 60.181 52.174 0.00 0.00 0.00 4.63
3614 4205 3.447586 TGGGAGGTAAAGAGATCAACGAG 59.552 47.826 0.00 0.00 0.00 4.18
3615 4206 3.437213 TGGGAGGTAAAGAGATCAACGA 58.563 45.455 0.00 0.00 0.00 3.85
3616 4207 3.887621 TGGGAGGTAAAGAGATCAACG 57.112 47.619 0.00 0.00 0.00 4.10
3617 4208 5.046231 AGAGTTGGGAGGTAAAGAGATCAAC 60.046 44.000 0.00 0.00 35.04 3.18
3618 4209 5.094387 AGAGTTGGGAGGTAAAGAGATCAA 58.906 41.667 0.00 0.00 0.00 2.57
3619 4210 4.689062 AGAGTTGGGAGGTAAAGAGATCA 58.311 43.478 0.00 0.00 0.00 2.92
3620 4211 6.987403 ATAGAGTTGGGAGGTAAAGAGATC 57.013 41.667 0.00 0.00 0.00 2.75
3621 4212 6.408662 GCAATAGAGTTGGGAGGTAAAGAGAT 60.409 42.308 0.00 0.00 0.00 2.75
3622 4213 5.104900 GCAATAGAGTTGGGAGGTAAAGAGA 60.105 44.000 0.00 0.00 0.00 3.10
3623 4214 5.119694 GCAATAGAGTTGGGAGGTAAAGAG 58.880 45.833 0.00 0.00 0.00 2.85
3624 4215 4.534500 TGCAATAGAGTTGGGAGGTAAAGA 59.466 41.667 0.00 0.00 0.00 2.52
3625 4216 4.636206 GTGCAATAGAGTTGGGAGGTAAAG 59.364 45.833 0.00 0.00 0.00 1.85
3626 4217 4.566907 GGTGCAATAGAGTTGGGAGGTAAA 60.567 45.833 0.00 0.00 0.00 2.01
3627 4218 3.054655 GGTGCAATAGAGTTGGGAGGTAA 60.055 47.826 0.00 0.00 0.00 2.85
3628 4219 2.504175 GGTGCAATAGAGTTGGGAGGTA 59.496 50.000 0.00 0.00 0.00 3.08
3629 4220 1.282157 GGTGCAATAGAGTTGGGAGGT 59.718 52.381 0.00 0.00 0.00 3.85
3630 4221 1.561542 AGGTGCAATAGAGTTGGGAGG 59.438 52.381 0.00 0.00 0.00 4.30
3631 4222 3.274288 GAAGGTGCAATAGAGTTGGGAG 58.726 50.000 0.00 0.00 0.00 4.30
3632 4223 2.026262 GGAAGGTGCAATAGAGTTGGGA 60.026 50.000 0.00 0.00 0.00 4.37
3633 4224 2.290896 TGGAAGGTGCAATAGAGTTGGG 60.291 50.000 0.00 0.00 0.00 4.12
3634 4225 3.071874 TGGAAGGTGCAATAGAGTTGG 57.928 47.619 0.00 0.00 0.00 3.77
3635 4226 5.647658 TGTAATGGAAGGTGCAATAGAGTTG 59.352 40.000 0.00 0.00 0.00 3.16
3636 4227 5.815581 TGTAATGGAAGGTGCAATAGAGTT 58.184 37.500 0.00 0.00 0.00 3.01
3637 4228 5.435686 TGTAATGGAAGGTGCAATAGAGT 57.564 39.130 0.00 0.00 0.00 3.24
3638 4229 6.057533 TCATGTAATGGAAGGTGCAATAGAG 58.942 40.000 0.00 0.00 46.73 2.43
3639 4230 6.000246 TCATGTAATGGAAGGTGCAATAGA 58.000 37.500 0.00 0.00 46.73 1.98
3640 4231 6.057533 TCTCATGTAATGGAAGGTGCAATAG 58.942 40.000 0.00 0.00 46.73 1.73
3641 4232 6.000246 TCTCATGTAATGGAAGGTGCAATA 58.000 37.500 0.00 0.00 46.73 1.90
3642 4233 4.858850 TCTCATGTAATGGAAGGTGCAAT 58.141 39.130 0.00 0.00 46.73 3.56
3643 4234 4.263462 ACTCTCATGTAATGGAAGGTGCAA 60.263 41.667 0.00 0.00 46.73 4.08
3644 4235 3.264193 ACTCTCATGTAATGGAAGGTGCA 59.736 43.478 0.00 0.00 46.73 4.57
3645 4236 3.878778 ACTCTCATGTAATGGAAGGTGC 58.121 45.455 0.00 0.00 46.73 5.01
3646 4237 6.471233 TCTACTCTCATGTAATGGAAGGTG 57.529 41.667 0.00 0.00 46.73 4.00
3647 4238 5.069781 GCTCTACTCTCATGTAATGGAAGGT 59.930 44.000 0.00 0.00 46.73 3.50
3648 4239 5.510520 GGCTCTACTCTCATGTAATGGAAGG 60.511 48.000 0.00 0.00 46.73 3.46
3649 4240 5.304101 AGGCTCTACTCTCATGTAATGGAAG 59.696 44.000 0.00 0.00 46.73 3.46
3650 4241 5.211973 AGGCTCTACTCTCATGTAATGGAA 58.788 41.667 0.00 0.00 46.73 3.53
3651 4242 4.809193 AGGCTCTACTCTCATGTAATGGA 58.191 43.478 0.00 0.00 46.73 3.41
3652 4243 4.832266 AGAGGCTCTACTCTCATGTAATGG 59.168 45.833 17.09 0.00 44.23 3.16
3653 4244 6.040278 TCAAGAGGCTCTACTCTCATGTAATG 59.960 42.308 19.07 7.53 46.70 1.90
3654 4245 6.132658 TCAAGAGGCTCTACTCTCATGTAAT 58.867 40.000 19.07 0.00 46.70 1.89
3655 4246 5.510430 TCAAGAGGCTCTACTCTCATGTAA 58.490 41.667 19.07 0.00 46.70 2.41
3656 4247 5.117406 TCAAGAGGCTCTACTCTCATGTA 57.883 43.478 19.07 0.00 46.70 2.29
3657 4248 3.953612 CTCAAGAGGCTCTACTCTCATGT 59.046 47.826 19.07 0.00 46.70 3.21
3658 4249 3.243501 GCTCAAGAGGCTCTACTCTCATG 60.244 52.174 19.07 10.56 46.70 3.07
3659 4250 2.958355 GCTCAAGAGGCTCTACTCTCAT 59.042 50.000 19.07 0.00 46.70 2.90
3660 4251 2.374184 GCTCAAGAGGCTCTACTCTCA 58.626 52.381 19.07 0.00 46.70 3.27
3661 4252 1.681264 GGCTCAAGAGGCTCTACTCTC 59.319 57.143 19.07 6.33 46.70 3.20
3685 4276 4.162690 CTGGAGGCTACCGGGTGC 62.163 72.222 10.66 9.66 33.06 5.01
3686 4277 2.683933 ACTGGAGGCTACCGGGTG 60.684 66.667 10.66 0.00 40.34 4.61
3687 4278 2.683933 CACTGGAGGCTACCGGGT 60.684 66.667 6.32 4.46 40.34 5.28
3688 4279 2.363795 TCACTGGAGGCTACCGGG 60.364 66.667 6.32 0.55 40.34 5.73
3689 4280 2.893398 GTCACTGGAGGCTACCGG 59.107 66.667 0.00 0.00 41.66 5.28
3690 4281 2.490217 CGTCACTGGAGGCTACCG 59.510 66.667 0.00 0.00 0.00 4.02
3691 4282 2.893398 CCGTCACTGGAGGCTACC 59.107 66.667 0.00 0.00 0.00 3.18
3692 4283 2.184579 GCCGTCACTGGAGGCTAC 59.815 66.667 8.01 0.00 46.83 3.58
3696 4287 1.949847 CTGGTAGCCGTCACTGGAGG 61.950 65.000 0.00 0.00 0.00 4.30
3697 4288 1.513158 CTGGTAGCCGTCACTGGAG 59.487 63.158 0.00 0.00 0.00 3.86
3698 4289 2.646175 GCTGGTAGCCGTCACTGGA 61.646 63.158 0.00 0.00 34.48 3.86
3699 4290 2.125512 GCTGGTAGCCGTCACTGG 60.126 66.667 0.00 0.00 34.48 4.00
3708 4299 2.886124 GCTCGAACGGCTGGTAGC 60.886 66.667 0.00 0.00 41.46 3.58
3709 4300 2.579787 CGCTCGAACGGCTGGTAG 60.580 66.667 0.00 0.00 0.00 3.18
3710 4301 3.367743 ACGCTCGAACGGCTGGTA 61.368 61.111 13.42 0.00 37.37 3.25
3713 4304 3.036084 AACACGCTCGAACGGCTG 61.036 61.111 13.42 5.26 37.37 4.85
3714 4305 3.036084 CAACACGCTCGAACGGCT 61.036 61.111 13.42 0.00 37.37 5.52
3715 4306 3.277742 GACAACACGCTCGAACGGC 62.278 63.158 13.42 0.00 37.37 5.68
3716 4307 1.282248 ATGACAACACGCTCGAACGG 61.282 55.000 13.42 4.30 37.37 4.44
3717 4308 0.506932 AATGACAACACGCTCGAACG 59.493 50.000 6.68 6.68 39.50 3.95
3718 4309 1.398451 CCAATGACAACACGCTCGAAC 60.398 52.381 0.00 0.00 0.00 3.95
3719 4310 0.865111 CCAATGACAACACGCTCGAA 59.135 50.000 0.00 0.00 0.00 3.71
3720 4311 0.032815 TCCAATGACAACACGCTCGA 59.967 50.000 0.00 0.00 0.00 4.04
3721 4312 0.865111 TTCCAATGACAACACGCTCG 59.135 50.000 0.00 0.00 0.00 5.03
3722 4313 1.197721 CCTTCCAATGACAACACGCTC 59.802 52.381 0.00 0.00 0.00 5.03
3723 4314 1.238439 CCTTCCAATGACAACACGCT 58.762 50.000 0.00 0.00 0.00 5.07
3724 4315 0.387239 GCCTTCCAATGACAACACGC 60.387 55.000 0.00 0.00 0.00 5.34
3725 4316 0.950836 TGCCTTCCAATGACAACACG 59.049 50.000 0.00 0.00 0.00 4.49
3726 4317 2.353011 CCATGCCTTCCAATGACAACAC 60.353 50.000 0.00 0.00 0.00 3.32
3727 4318 1.894466 CCATGCCTTCCAATGACAACA 59.106 47.619 0.00 0.00 0.00 3.33
3728 4319 1.404583 GCCATGCCTTCCAATGACAAC 60.405 52.381 0.00 0.00 0.00 3.32
3729 4320 0.896923 GCCATGCCTTCCAATGACAA 59.103 50.000 0.00 0.00 0.00 3.18
3730 4321 0.251698 TGCCATGCCTTCCAATGACA 60.252 50.000 0.00 0.00 0.00 3.58
3731 4322 0.458669 CTGCCATGCCTTCCAATGAC 59.541 55.000 0.00 0.00 0.00 3.06
3732 4323 1.324740 GCTGCCATGCCTTCCAATGA 61.325 55.000 0.00 0.00 0.00 2.57
3733 4324 1.143183 GCTGCCATGCCTTCCAATG 59.857 57.895 0.00 0.00 0.00 2.82
3734 4325 0.689745 ATGCTGCCATGCCTTCCAAT 60.690 50.000 0.00 0.00 0.00 3.16
3735 4326 1.305465 ATGCTGCCATGCCTTCCAA 60.305 52.632 0.00 0.00 0.00 3.53
3736 4327 1.755395 GATGCTGCCATGCCTTCCA 60.755 57.895 0.00 0.00 0.00 3.53
3737 4328 1.041447 AAGATGCTGCCATGCCTTCC 61.041 55.000 0.00 0.00 0.00 3.46
3738 4329 0.384669 GAAGATGCTGCCATGCCTTC 59.615 55.000 0.00 0.00 30.17 3.46
3739 4330 1.381928 CGAAGATGCTGCCATGCCTT 61.382 55.000 0.00 0.00 0.00 4.35
3740 4331 1.822613 CGAAGATGCTGCCATGCCT 60.823 57.895 0.00 0.00 0.00 4.75
3741 4332 2.719979 CGAAGATGCTGCCATGCC 59.280 61.111 0.00 0.00 0.00 4.40
3742 4333 2.025727 GCGAAGATGCTGCCATGC 59.974 61.111 0.00 0.00 0.00 4.06
3747 4338 0.864455 GACTATGGCGAAGATGCTGC 59.136 55.000 0.00 0.00 34.52 5.25
3748 4339 2.133553 CTGACTATGGCGAAGATGCTG 58.866 52.381 0.00 0.00 34.52 4.41
3749 4340 1.759445 ACTGACTATGGCGAAGATGCT 59.241 47.619 0.00 0.00 34.52 3.79
3750 4341 2.131183 GACTGACTATGGCGAAGATGC 58.869 52.381 0.00 0.00 0.00 3.91
3751 4342 3.119291 GTGACTGACTATGGCGAAGATG 58.881 50.000 0.00 0.00 0.00 2.90
3752 4343 2.101582 GGTGACTGACTATGGCGAAGAT 59.898 50.000 0.00 0.00 0.00 2.40
3753 4344 1.476891 GGTGACTGACTATGGCGAAGA 59.523 52.381 0.00 0.00 0.00 2.87
3754 4345 1.204704 TGGTGACTGACTATGGCGAAG 59.795 52.381 0.00 0.00 0.00 3.79
3755 4346 1.262417 TGGTGACTGACTATGGCGAA 58.738 50.000 0.00 0.00 0.00 4.70
3756 4347 1.136891 CATGGTGACTGACTATGGCGA 59.863 52.381 0.00 0.00 39.34 5.54
3757 4348 1.575244 CATGGTGACTGACTATGGCG 58.425 55.000 0.00 0.00 39.34 5.69
3760 4351 3.634397 AACCCATGGTGACTGACTATG 57.366 47.619 11.73 0.00 41.96 2.23
3761 4352 3.308402 CCAAACCCATGGTGACTGACTAT 60.308 47.826 11.73 0.00 35.34 2.12
3762 4353 2.039746 CCAAACCCATGGTGACTGACTA 59.960 50.000 11.73 0.00 35.34 2.59
3763 4354 1.202927 CCAAACCCATGGTGACTGACT 60.203 52.381 11.73 0.00 35.34 3.41
3764 4355 1.247567 CCAAACCCATGGTGACTGAC 58.752 55.000 11.73 0.00 35.34 3.51
3765 4356 0.112218 CCCAAACCCATGGTGACTGA 59.888 55.000 11.73 0.00 38.91 3.41
3766 4357 0.112218 TCCCAAACCCATGGTGACTG 59.888 55.000 11.73 2.27 38.91 3.51
3767 4358 0.405585 CTCCCAAACCCATGGTGACT 59.594 55.000 11.73 0.00 38.91 3.41
3768 4359 0.611896 CCTCCCAAACCCATGGTGAC 60.612 60.000 11.73 0.00 38.91 3.67
3769 4360 0.774096 TCCTCCCAAACCCATGGTGA 60.774 55.000 11.73 0.00 38.91 4.02
3770 4361 0.323725 CTCCTCCCAAACCCATGGTG 60.324 60.000 11.73 4.77 38.91 4.17
3771 4362 0.477597 TCTCCTCCCAAACCCATGGT 60.478 55.000 11.73 0.00 38.91 3.55
3772 4363 0.704076 TTCTCCTCCCAAACCCATGG 59.296 55.000 4.14 4.14 40.35 3.66
3773 4364 1.616994 GGTTCTCCTCCCAAACCCATG 60.617 57.143 0.00 0.00 37.13 3.66
3774 4365 0.704664 GGTTCTCCTCCCAAACCCAT 59.295 55.000 0.00 0.00 37.13 4.00
3775 4366 0.699577 TGGTTCTCCTCCCAAACCCA 60.700 55.000 1.37 0.00 41.44 4.51
3776 4367 0.038310 CTGGTTCTCCTCCCAAACCC 59.962 60.000 1.37 0.00 41.44 4.11
3777 4368 0.038310 CCTGGTTCTCCTCCCAAACC 59.962 60.000 0.00 0.00 42.28 3.27
3778 4369 0.771755 ACCTGGTTCTCCTCCCAAAC 59.228 55.000 0.00 0.00 34.23 2.93
3779 4370 2.426431 TACCTGGTTCTCCTCCCAAA 57.574 50.000 3.84 0.00 34.23 3.28
3780 4371 2.576191 CAATACCTGGTTCTCCTCCCAA 59.424 50.000 3.84 0.00 34.23 4.12
3781 4372 2.196595 CAATACCTGGTTCTCCTCCCA 58.803 52.381 3.84 0.00 34.23 4.37
3782 4373 2.478292 TCAATACCTGGTTCTCCTCCC 58.522 52.381 3.84 0.00 34.23 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.