Multiple sequence alignment - TraesCS4A01G219700
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4A01G219700 | chr4A | 100.000 | 3480 | 0 | 0 | 1 | 3480 | 521920907 | 521917428 | 0.000000e+00 | 6427.0 |
1 | TraesCS4A01G219700 | chr4A | 98.592 | 71 | 0 | 1 | 1 | 71 | 20252433 | 20252502 | 1.310000e-24 | 124.0 |
2 | TraesCS4A01G219700 | chr4A | 94.667 | 75 | 3 | 1 | 1 | 75 | 706604050 | 706603977 | 7.890000e-22 | 115.0 |
3 | TraesCS4A01G219700 | chr4A | 93.421 | 76 | 3 | 1 | 1 | 74 | 157584908 | 157584983 | 1.020000e-20 | 111.0 |
4 | TraesCS4A01G219700 | chr4D | 91.754 | 2971 | 100 | 49 | 303 | 3215 | 69680814 | 69677931 | 0.000000e+00 | 3995.0 |
5 | TraesCS4A01G219700 | chr4D | 88.119 | 202 | 6 | 8 | 3279 | 3480 | 69677921 | 69677738 | 1.260000e-54 | 224.0 |
6 | TraesCS4A01G219700 | chr4D | 94.595 | 74 | 3 | 1 | 1 | 74 | 428942920 | 428942848 | 2.840000e-21 | 113.0 |
7 | TraesCS4A01G219700 | chr4B | 92.397 | 2236 | 102 | 26 | 953 | 3139 | 103056459 | 103054243 | 0.000000e+00 | 3125.0 |
8 | TraesCS4A01G219700 | chr4B | 89.808 | 520 | 23 | 11 | 303 | 822 | 103057386 | 103056897 | 1.050000e-179 | 640.0 |
9 | TraesCS4A01G219700 | chr4B | 91.500 | 200 | 13 | 3 | 3024 | 3222 | 103054238 | 103054042 | 4.430000e-69 | 272.0 |
10 | TraesCS4A01G219700 | chr4B | 97.674 | 43 | 1 | 0 | 3434 | 3476 | 103051241 | 103051199 | 1.340000e-09 | 75.0 |
11 | TraesCS4A01G219700 | chr2B | 93.755 | 1153 | 45 | 16 | 2097 | 3239 | 214818215 | 214819350 | 0.000000e+00 | 1705.0 |
12 | TraesCS4A01G219700 | chr2B | 98.760 | 242 | 3 | 0 | 66 | 307 | 608697055 | 608697296 | 6.900000e-117 | 431.0 |
13 | TraesCS4A01G219700 | chr2B | 98.750 | 240 | 3 | 0 | 66 | 305 | 298558864 | 298559103 | 8.930000e-116 | 427.0 |
14 | TraesCS4A01G219700 | chr2B | 94.340 | 53 | 3 | 0 | 1034 | 1086 | 799029270 | 799029322 | 8.010000e-12 | 82.4 |
15 | TraesCS4A01G219700 | chr2B | 92.453 | 53 | 4 | 0 | 1034 | 1086 | 799107558 | 799107506 | 3.720000e-10 | 76.8 |
16 | TraesCS4A01G219700 | chr7B | 99.167 | 240 | 2 | 0 | 66 | 305 | 677059114 | 677059353 | 1.920000e-117 | 433.0 |
17 | TraesCS4A01G219700 | chr7B | 97.984 | 248 | 5 | 0 | 66 | 313 | 154366246 | 154365999 | 6.900000e-117 | 431.0 |
18 | TraesCS4A01G219700 | chr7B | 97.959 | 245 | 5 | 0 | 66 | 310 | 488783407 | 488783651 | 3.210000e-115 | 425.0 |
19 | TraesCS4A01G219700 | chr7B | 97.551 | 245 | 6 | 0 | 66 | 310 | 117799316 | 117799072 | 1.490000e-113 | 420.0 |
20 | TraesCS4A01G219700 | chr7B | 94.521 | 73 | 4 | 0 | 1 | 73 | 669205453 | 669205525 | 2.840000e-21 | 113.0 |
21 | TraesCS4A01G219700 | chr7B | 94.521 | 73 | 3 | 1 | 1 | 73 | 23409602 | 23409673 | 1.020000e-20 | 111.0 |
22 | TraesCS4A01G219700 | chr7B | 97.500 | 40 | 1 | 0 | 1032 | 1071 | 426972987 | 426973026 | 6.230000e-08 | 69.4 |
23 | TraesCS4A01G219700 | chr7A | 98.750 | 240 | 3 | 0 | 66 | 305 | 664841960 | 664842199 | 8.930000e-116 | 427.0 |
24 | TraesCS4A01G219700 | chr7A | 95.833 | 72 | 3 | 0 | 1 | 72 | 211806948 | 211806877 | 2.190000e-22 | 117.0 |
25 | TraesCS4A01G219700 | chr7A | 97.500 | 40 | 1 | 0 | 1032 | 1071 | 473921377 | 473921416 | 6.230000e-08 | 69.4 |
26 | TraesCS4A01G219700 | chr1B | 96.471 | 255 | 5 | 1 | 66 | 316 | 2112874 | 2112620 | 5.370000e-113 | 418.0 |
27 | TraesCS4A01G219700 | chr1B | 96.414 | 251 | 9 | 0 | 66 | 316 | 2090098 | 2089848 | 6.950000e-112 | 414.0 |
28 | TraesCS4A01G219700 | chr1B | 91.915 | 235 | 17 | 2 | 1202 | 1435 | 481542083 | 481541850 | 9.310000e-86 | 327.0 |
29 | TraesCS4A01G219700 | chr1B | 92.405 | 79 | 3 | 3 | 1 | 79 | 561755521 | 561755446 | 3.670000e-20 | 110.0 |
30 | TraesCS4A01G219700 | chr1D | 93.191 | 235 | 14 | 2 | 1202 | 1435 | 359665806 | 359665573 | 9.250000e-91 | 344.0 |
31 | TraesCS4A01G219700 | chr1A | 92.340 | 235 | 16 | 2 | 1202 | 1435 | 459188125 | 459187892 | 2.000000e-87 | 333.0 |
32 | TraesCS4A01G219700 | chr3D | 91.064 | 235 | 19 | 2 | 1202 | 1435 | 515776705 | 515776938 | 2.020000e-82 | 316.0 |
33 | TraesCS4A01G219700 | chr3D | 84.454 | 238 | 25 | 6 | 1204 | 1429 | 445037938 | 445037701 | 1.260000e-54 | 224.0 |
34 | TraesCS4A01G219700 | chr3A | 91.064 | 235 | 19 | 2 | 1202 | 1435 | 650056443 | 650056676 | 2.020000e-82 | 316.0 |
35 | TraesCS4A01G219700 | chr3B | 89.787 | 235 | 22 | 2 | 1202 | 1435 | 678548566 | 678548799 | 2.030000e-77 | 300.0 |
36 | TraesCS4A01G219700 | chr2D | 80.488 | 246 | 34 | 10 | 1203 | 1435 | 175331639 | 175331883 | 3.570000e-40 | 176.0 |
37 | TraesCS4A01G219700 | chr6A | 95.775 | 71 | 3 | 0 | 1 | 71 | 39142779 | 39142849 | 7.890000e-22 | 115.0 |
38 | TraesCS4A01G219700 | chr7D | 97.500 | 40 | 1 | 0 | 1032 | 1071 | 412761583 | 412761622 | 6.230000e-08 | 69.4 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4A01G219700 | chr4A | 521917428 | 521920907 | 3479 | True | 6427.0 | 6427 | 100.00000 | 1 | 3480 | 1 | chr4A.!!$R1 | 3479 |
1 | TraesCS4A01G219700 | chr4D | 69677738 | 69680814 | 3076 | True | 2109.5 | 3995 | 89.93650 | 303 | 3480 | 2 | chr4D.!!$R2 | 3177 |
2 | TraesCS4A01G219700 | chr4B | 103051199 | 103057386 | 6187 | True | 1028.0 | 3125 | 92.84475 | 303 | 3476 | 4 | chr4B.!!$R1 | 3173 |
3 | TraesCS4A01G219700 | chr2B | 214818215 | 214819350 | 1135 | False | 1705.0 | 1705 | 93.75500 | 2097 | 3239 | 1 | chr2B.!!$F1 | 1142 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
533 | 534 | 0.346932 | ATGCCTCCCTCCCTTCCTAA | 59.653 | 55.000 | 0.0 | 0.0 | 0.0 | 2.69 | F |
534 | 535 | 0.620700 | TGCCTCCCTCCCTTCCTAAC | 60.621 | 60.000 | 0.0 | 0.0 | 0.0 | 2.34 | F |
537 | 538 | 1.002533 | TCCCTCCCTTCCTAACCCG | 59.997 | 63.158 | 0.0 | 0.0 | 0.0 | 5.28 | F |
1679 | 2017 | 0.108662 | GGCCATGCGAAAAAGAAGGG | 60.109 | 55.000 | 0.0 | 0.0 | 0.0 | 3.95 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1479 | 1800 | 0.112606 | TTGACAGAGAGAGACGGGGT | 59.887 | 55.0 | 0.0 | 0.0 | 0.00 | 4.95 | R |
1637 | 1975 | 0.676782 | ACGCACCTAACCTGCCAATC | 60.677 | 55.0 | 0.0 | 0.0 | 0.00 | 2.67 | R |
2194 | 2550 | 0.798776 | GCATGGAGTGGTTCGAGTTG | 59.201 | 55.0 | 0.0 | 0.0 | 0.00 | 3.16 | R |
3345 | 4117 | 0.179207 | TGAGTACACGACGATGACGC | 60.179 | 55.0 | 0.0 | 0.0 | 43.96 | 5.19 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
35 | 36 | 9.148104 | AGTTAAATTATCGACCTGAAACTACAC | 57.852 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
36 | 37 | 6.642683 | AAATTATCGACCTGAAACTACACG | 57.357 | 37.500 | 0.00 | 0.00 | 0.00 | 4.49 |
37 | 38 | 5.571784 | ATTATCGACCTGAAACTACACGA | 57.428 | 39.130 | 0.00 | 0.00 | 0.00 | 4.35 |
38 | 39 | 3.928727 | ATCGACCTGAAACTACACGAA | 57.071 | 42.857 | 0.00 | 0.00 | 32.48 | 3.85 |
39 | 40 | 3.928727 | TCGACCTGAAACTACACGAAT | 57.071 | 42.857 | 0.00 | 0.00 | 0.00 | 3.34 |
40 | 41 | 3.571571 | TCGACCTGAAACTACACGAATG | 58.428 | 45.455 | 0.00 | 0.00 | 0.00 | 2.67 |
41 | 42 | 3.253921 | TCGACCTGAAACTACACGAATGA | 59.746 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
42 | 43 | 3.364023 | CGACCTGAAACTACACGAATGAC | 59.636 | 47.826 | 0.00 | 0.00 | 0.00 | 3.06 |
43 | 44 | 4.557205 | GACCTGAAACTACACGAATGACT | 58.443 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
44 | 45 | 4.957296 | ACCTGAAACTACACGAATGACTT | 58.043 | 39.130 | 0.00 | 0.00 | 0.00 | 3.01 |
45 | 46 | 6.092955 | ACCTGAAACTACACGAATGACTTA | 57.907 | 37.500 | 0.00 | 0.00 | 0.00 | 2.24 |
46 | 47 | 6.698380 | ACCTGAAACTACACGAATGACTTAT | 58.302 | 36.000 | 0.00 | 0.00 | 0.00 | 1.73 |
47 | 48 | 7.833786 | ACCTGAAACTACACGAATGACTTATA | 58.166 | 34.615 | 0.00 | 0.00 | 0.00 | 0.98 |
48 | 49 | 7.758528 | ACCTGAAACTACACGAATGACTTATAC | 59.241 | 37.037 | 0.00 | 0.00 | 0.00 | 1.47 |
49 | 50 | 7.758076 | CCTGAAACTACACGAATGACTTATACA | 59.242 | 37.037 | 0.00 | 0.00 | 0.00 | 2.29 |
50 | 51 | 8.456904 | TGAAACTACACGAATGACTTATACAC | 57.543 | 34.615 | 0.00 | 0.00 | 0.00 | 2.90 |
51 | 52 | 7.543172 | TGAAACTACACGAATGACTTATACACC | 59.457 | 37.037 | 0.00 | 0.00 | 0.00 | 4.16 |
52 | 53 | 5.575957 | ACTACACGAATGACTTATACACCG | 58.424 | 41.667 | 0.00 | 0.00 | 0.00 | 4.94 |
53 | 54 | 3.777478 | ACACGAATGACTTATACACCGG | 58.223 | 45.455 | 0.00 | 0.00 | 0.00 | 5.28 |
54 | 55 | 3.120792 | CACGAATGACTTATACACCGGG | 58.879 | 50.000 | 6.32 | 0.00 | 0.00 | 5.73 |
55 | 56 | 3.025978 | ACGAATGACTTATACACCGGGA | 58.974 | 45.455 | 6.32 | 0.00 | 0.00 | 5.14 |
56 | 57 | 3.181483 | ACGAATGACTTATACACCGGGAC | 60.181 | 47.826 | 6.32 | 0.00 | 0.00 | 4.46 |
71 | 72 | 1.894881 | GGGACGGAGGTAGTAGCTAG | 58.105 | 60.000 | 0.89 | 2.51 | 0.00 | 3.42 |
72 | 73 | 1.142667 | GGGACGGAGGTAGTAGCTAGT | 59.857 | 57.143 | 6.29 | 6.29 | 0.00 | 2.57 |
73 | 74 | 2.370189 | GGGACGGAGGTAGTAGCTAGTA | 59.630 | 54.545 | 4.07 | 4.07 | 0.00 | 1.82 |
74 | 75 | 3.181450 | GGGACGGAGGTAGTAGCTAGTAA | 60.181 | 52.174 | 9.92 | 0.00 | 0.00 | 2.24 |
75 | 76 | 3.812609 | GGACGGAGGTAGTAGCTAGTAAC | 59.187 | 52.174 | 14.81 | 14.81 | 0.00 | 2.50 |
76 | 77 | 4.446371 | GACGGAGGTAGTAGCTAGTAACA | 58.554 | 47.826 | 22.73 | 0.00 | 0.00 | 2.41 |
77 | 78 | 5.046288 | ACGGAGGTAGTAGCTAGTAACAT | 57.954 | 43.478 | 22.73 | 10.04 | 0.00 | 2.71 |
78 | 79 | 6.179906 | ACGGAGGTAGTAGCTAGTAACATA | 57.820 | 41.667 | 22.73 | 0.00 | 0.00 | 2.29 |
79 | 80 | 6.229733 | ACGGAGGTAGTAGCTAGTAACATAG | 58.770 | 44.000 | 22.73 | 15.38 | 0.00 | 2.23 |
88 | 89 | 2.974536 | GCTAGTAACATAGCGCTCTTCG | 59.025 | 50.000 | 16.34 | 3.03 | 38.90 | 3.79 |
89 | 90 | 3.303857 | GCTAGTAACATAGCGCTCTTCGA | 60.304 | 47.826 | 16.34 | 0.00 | 38.90 | 3.71 |
90 | 91 | 3.341857 | AGTAACATAGCGCTCTTCGAG | 57.658 | 47.619 | 16.34 | 0.64 | 41.67 | 4.04 |
91 | 92 | 2.943690 | AGTAACATAGCGCTCTTCGAGA | 59.056 | 45.455 | 16.34 | 0.00 | 41.67 | 4.04 |
92 | 93 | 2.941453 | AACATAGCGCTCTTCGAGAA | 57.059 | 45.000 | 16.34 | 0.00 | 41.67 | 2.87 |
93 | 94 | 2.941453 | ACATAGCGCTCTTCGAGAAA | 57.059 | 45.000 | 16.34 | 0.00 | 41.67 | 2.52 |
94 | 95 | 3.232213 | ACATAGCGCTCTTCGAGAAAA | 57.768 | 42.857 | 16.34 | 0.00 | 41.67 | 2.29 |
95 | 96 | 3.786635 | ACATAGCGCTCTTCGAGAAAAT | 58.213 | 40.909 | 16.34 | 0.00 | 41.67 | 1.82 |
96 | 97 | 4.184629 | ACATAGCGCTCTTCGAGAAAATT | 58.815 | 39.130 | 16.34 | 0.00 | 41.67 | 1.82 |
97 | 98 | 4.268884 | ACATAGCGCTCTTCGAGAAAATTC | 59.731 | 41.667 | 16.34 | 0.00 | 41.67 | 2.17 |
98 | 99 | 2.966050 | AGCGCTCTTCGAGAAAATTCT | 58.034 | 42.857 | 2.64 | 0.00 | 41.67 | 2.40 |
99 | 100 | 2.670414 | AGCGCTCTTCGAGAAAATTCTG | 59.330 | 45.455 | 2.64 | 0.00 | 41.67 | 3.02 |
100 | 101 | 2.786021 | GCGCTCTTCGAGAAAATTCTGC | 60.786 | 50.000 | 0.00 | 0.00 | 41.67 | 4.26 |
101 | 102 | 2.670414 | CGCTCTTCGAGAAAATTCTGCT | 59.330 | 45.455 | 0.00 | 0.00 | 41.67 | 4.24 |
102 | 103 | 3.124297 | CGCTCTTCGAGAAAATTCTGCTT | 59.876 | 43.478 | 0.00 | 0.00 | 41.67 | 3.91 |
103 | 104 | 4.327357 | CGCTCTTCGAGAAAATTCTGCTTA | 59.673 | 41.667 | 0.00 | 0.00 | 41.67 | 3.09 |
104 | 105 | 5.006165 | CGCTCTTCGAGAAAATTCTGCTTAT | 59.994 | 40.000 | 0.00 | 0.00 | 41.67 | 1.73 |
105 | 106 | 6.190962 | GCTCTTCGAGAAAATTCTGCTTATG | 58.809 | 40.000 | 0.00 | 0.00 | 37.73 | 1.90 |
106 | 107 | 6.183360 | GCTCTTCGAGAAAATTCTGCTTATGT | 60.183 | 38.462 | 0.00 | 0.00 | 37.73 | 2.29 |
107 | 108 | 7.065216 | TCTTCGAGAAAATTCTGCTTATGTG | 57.935 | 36.000 | 0.00 | 0.00 | 37.73 | 3.21 |
108 | 109 | 5.801350 | TCGAGAAAATTCTGCTTATGTGG | 57.199 | 39.130 | 0.00 | 0.00 | 37.73 | 4.17 |
109 | 110 | 4.094887 | TCGAGAAAATTCTGCTTATGTGGC | 59.905 | 41.667 | 0.00 | 0.00 | 37.73 | 5.01 |
110 | 111 | 4.142622 | CGAGAAAATTCTGCTTATGTGGCA | 60.143 | 41.667 | 0.00 | 0.00 | 37.73 | 4.92 |
111 | 112 | 5.619757 | CGAGAAAATTCTGCTTATGTGGCAA | 60.620 | 40.000 | 0.00 | 0.00 | 39.30 | 4.52 |
112 | 113 | 5.717119 | AGAAAATTCTGCTTATGTGGCAAG | 58.283 | 37.500 | 0.00 | 0.00 | 39.30 | 4.01 |
113 | 114 | 5.244626 | AGAAAATTCTGCTTATGTGGCAAGT | 59.755 | 36.000 | 0.00 | 0.00 | 39.30 | 3.16 |
114 | 115 | 6.434028 | AGAAAATTCTGCTTATGTGGCAAGTA | 59.566 | 34.615 | 0.00 | 0.00 | 39.30 | 2.24 |
115 | 116 | 6.588719 | AAATTCTGCTTATGTGGCAAGTAA | 57.411 | 33.333 | 0.00 | 0.00 | 39.30 | 2.24 |
116 | 117 | 6.780457 | AATTCTGCTTATGTGGCAAGTAAT | 57.220 | 33.333 | 0.00 | 0.00 | 39.30 | 1.89 |
117 | 118 | 6.780457 | ATTCTGCTTATGTGGCAAGTAATT | 57.220 | 33.333 | 0.00 | 0.00 | 39.30 | 1.40 |
118 | 119 | 7.880160 | ATTCTGCTTATGTGGCAAGTAATTA | 57.120 | 32.000 | 0.00 | 0.00 | 39.30 | 1.40 |
119 | 120 | 7.695480 | TTCTGCTTATGTGGCAAGTAATTAA | 57.305 | 32.000 | 0.00 | 0.00 | 39.30 | 1.40 |
120 | 121 | 7.880160 | TCTGCTTATGTGGCAAGTAATTAAT | 57.120 | 32.000 | 0.00 | 0.00 | 39.30 | 1.40 |
121 | 122 | 7.706159 | TCTGCTTATGTGGCAAGTAATTAATG | 58.294 | 34.615 | 0.00 | 0.00 | 39.30 | 1.90 |
122 | 123 | 7.555914 | TCTGCTTATGTGGCAAGTAATTAATGA | 59.444 | 33.333 | 0.00 | 0.00 | 39.30 | 2.57 |
123 | 124 | 7.706159 | TGCTTATGTGGCAAGTAATTAATGAG | 58.294 | 34.615 | 0.00 | 0.00 | 36.71 | 2.90 |
124 | 125 | 7.555914 | TGCTTATGTGGCAAGTAATTAATGAGA | 59.444 | 33.333 | 0.00 | 0.00 | 36.71 | 3.27 |
125 | 126 | 8.072567 | GCTTATGTGGCAAGTAATTAATGAGAG | 58.927 | 37.037 | 0.00 | 0.00 | 0.00 | 3.20 |
126 | 127 | 6.949352 | ATGTGGCAAGTAATTAATGAGAGG | 57.051 | 37.500 | 0.00 | 0.00 | 0.00 | 3.69 |
127 | 128 | 5.815581 | TGTGGCAAGTAATTAATGAGAGGT | 58.184 | 37.500 | 0.00 | 0.00 | 0.00 | 3.85 |
128 | 129 | 5.647658 | TGTGGCAAGTAATTAATGAGAGGTG | 59.352 | 40.000 | 0.00 | 0.00 | 0.00 | 4.00 |
129 | 130 | 5.066505 | GTGGCAAGTAATTAATGAGAGGTGG | 59.933 | 44.000 | 0.00 | 0.00 | 0.00 | 4.61 |
130 | 131 | 5.193679 | GGCAAGTAATTAATGAGAGGTGGT | 58.806 | 41.667 | 4.19 | 0.00 | 0.00 | 4.16 |
131 | 132 | 6.069905 | TGGCAAGTAATTAATGAGAGGTGGTA | 60.070 | 38.462 | 4.19 | 0.00 | 0.00 | 3.25 |
132 | 133 | 6.826741 | GGCAAGTAATTAATGAGAGGTGGTAA | 59.173 | 38.462 | 4.19 | 0.00 | 0.00 | 2.85 |
133 | 134 | 7.201705 | GGCAAGTAATTAATGAGAGGTGGTAAC | 60.202 | 40.741 | 4.19 | 0.00 | 0.00 | 2.50 |
162 | 163 | 5.773239 | TGTTACTGTAACATAGCGCTTTC | 57.227 | 39.130 | 25.14 | 0.00 | 43.23 | 2.62 |
163 | 164 | 4.628333 | TGTTACTGTAACATAGCGCTTTCC | 59.372 | 41.667 | 25.14 | 0.00 | 43.23 | 3.13 |
164 | 165 | 3.328382 | ACTGTAACATAGCGCTTTCCA | 57.672 | 42.857 | 18.68 | 0.00 | 0.00 | 3.53 |
165 | 166 | 3.670625 | ACTGTAACATAGCGCTTTCCAA | 58.329 | 40.909 | 18.68 | 0.00 | 0.00 | 3.53 |
166 | 167 | 3.684788 | ACTGTAACATAGCGCTTTCCAAG | 59.315 | 43.478 | 18.68 | 7.94 | 0.00 | 3.61 |
167 | 168 | 3.932710 | CTGTAACATAGCGCTTTCCAAGA | 59.067 | 43.478 | 18.68 | 0.00 | 0.00 | 3.02 |
168 | 169 | 3.682858 | TGTAACATAGCGCTTTCCAAGAC | 59.317 | 43.478 | 18.68 | 6.42 | 0.00 | 3.01 |
169 | 170 | 2.472695 | ACATAGCGCTTTCCAAGACA | 57.527 | 45.000 | 18.68 | 0.00 | 0.00 | 3.41 |
170 | 171 | 2.778299 | ACATAGCGCTTTCCAAGACAA | 58.222 | 42.857 | 18.68 | 0.00 | 0.00 | 3.18 |
171 | 172 | 2.744202 | ACATAGCGCTTTCCAAGACAAG | 59.256 | 45.455 | 18.68 | 0.00 | 0.00 | 3.16 |
172 | 173 | 2.831685 | TAGCGCTTTCCAAGACAAGA | 57.168 | 45.000 | 18.68 | 0.00 | 0.00 | 3.02 |
173 | 174 | 2.191128 | AGCGCTTTCCAAGACAAGAT | 57.809 | 45.000 | 2.64 | 0.00 | 0.00 | 2.40 |
174 | 175 | 1.808945 | AGCGCTTTCCAAGACAAGATG | 59.191 | 47.619 | 2.64 | 0.00 | 0.00 | 2.90 |
175 | 176 | 1.806542 | GCGCTTTCCAAGACAAGATGA | 59.193 | 47.619 | 0.00 | 0.00 | 0.00 | 2.92 |
176 | 177 | 2.159599 | GCGCTTTCCAAGACAAGATGAG | 60.160 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
177 | 178 | 3.070018 | CGCTTTCCAAGACAAGATGAGT | 58.930 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
178 | 179 | 3.124297 | CGCTTTCCAAGACAAGATGAGTC | 59.876 | 47.826 | 0.00 | 0.00 | 36.26 | 3.36 |
180 | 181 | 5.482908 | GCTTTCCAAGACAAGATGAGTCTA | 58.517 | 41.667 | 0.00 | 0.00 | 45.11 | 2.59 |
181 | 182 | 6.112058 | GCTTTCCAAGACAAGATGAGTCTAT | 58.888 | 40.000 | 0.00 | 0.00 | 45.11 | 1.98 |
182 | 183 | 6.036953 | GCTTTCCAAGACAAGATGAGTCTATG | 59.963 | 42.308 | 0.00 | 0.00 | 45.11 | 2.23 |
183 | 184 | 6.857437 | TTCCAAGACAAGATGAGTCTATGA | 57.143 | 37.500 | 0.00 | 0.00 | 45.11 | 2.15 |
184 | 185 | 6.462552 | TCCAAGACAAGATGAGTCTATGAG | 57.537 | 41.667 | 0.00 | 0.00 | 45.11 | 2.90 |
185 | 186 | 5.049167 | CCAAGACAAGATGAGTCTATGAGC | 58.951 | 45.833 | 0.00 | 0.00 | 45.11 | 4.26 |
186 | 187 | 5.163426 | CCAAGACAAGATGAGTCTATGAGCT | 60.163 | 44.000 | 0.00 | 0.00 | 45.11 | 4.09 |
187 | 188 | 6.040278 | CCAAGACAAGATGAGTCTATGAGCTA | 59.960 | 42.308 | 0.00 | 0.00 | 45.11 | 3.32 |
188 | 189 | 6.882610 | AGACAAGATGAGTCTATGAGCTAG | 57.117 | 41.667 | 0.00 | 0.00 | 44.10 | 3.42 |
189 | 190 | 6.364701 | AGACAAGATGAGTCTATGAGCTAGT | 58.635 | 40.000 | 0.00 | 0.00 | 44.10 | 2.57 |
190 | 191 | 7.513856 | AGACAAGATGAGTCTATGAGCTAGTA | 58.486 | 38.462 | 0.00 | 0.00 | 44.10 | 1.82 |
191 | 192 | 7.996066 | AGACAAGATGAGTCTATGAGCTAGTAA | 59.004 | 37.037 | 0.00 | 0.00 | 44.10 | 2.24 |
192 | 193 | 8.526667 | ACAAGATGAGTCTATGAGCTAGTAAA | 57.473 | 34.615 | 0.00 | 0.00 | 33.30 | 2.01 |
193 | 194 | 9.142014 | ACAAGATGAGTCTATGAGCTAGTAAAT | 57.858 | 33.333 | 0.00 | 0.00 | 33.30 | 1.40 |
194 | 195 | 9.409312 | CAAGATGAGTCTATGAGCTAGTAAATG | 57.591 | 37.037 | 0.00 | 0.00 | 33.30 | 2.32 |
195 | 196 | 8.932434 | AGATGAGTCTATGAGCTAGTAAATGA | 57.068 | 34.615 | 0.00 | 0.00 | 31.36 | 2.57 |
196 | 197 | 9.360901 | AGATGAGTCTATGAGCTAGTAAATGAA | 57.639 | 33.333 | 0.00 | 0.00 | 31.36 | 2.57 |
197 | 198 | 9.624697 | GATGAGTCTATGAGCTAGTAAATGAAG | 57.375 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
198 | 199 | 7.429633 | TGAGTCTATGAGCTAGTAAATGAAGC | 58.570 | 38.462 | 0.00 | 0.00 | 36.48 | 3.86 |
199 | 200 | 6.754193 | AGTCTATGAGCTAGTAAATGAAGCC | 58.246 | 40.000 | 0.00 | 0.00 | 36.92 | 4.35 |
200 | 201 | 6.325028 | AGTCTATGAGCTAGTAAATGAAGCCA | 59.675 | 38.462 | 0.00 | 0.00 | 36.92 | 4.75 |
201 | 202 | 7.016072 | AGTCTATGAGCTAGTAAATGAAGCCAT | 59.984 | 37.037 | 0.00 | 0.00 | 36.92 | 4.40 |
202 | 203 | 7.330700 | GTCTATGAGCTAGTAAATGAAGCCATC | 59.669 | 40.741 | 0.00 | 0.00 | 36.92 | 3.51 |
203 | 204 | 5.620738 | TGAGCTAGTAAATGAAGCCATCT | 57.379 | 39.130 | 0.00 | 0.00 | 36.92 | 2.90 |
204 | 205 | 6.731292 | TGAGCTAGTAAATGAAGCCATCTA | 57.269 | 37.500 | 0.00 | 0.00 | 36.92 | 1.98 |
205 | 206 | 7.308450 | TGAGCTAGTAAATGAAGCCATCTAT | 57.692 | 36.000 | 0.00 | 0.00 | 36.92 | 1.98 |
206 | 207 | 7.157347 | TGAGCTAGTAAATGAAGCCATCTATG | 58.843 | 38.462 | 0.00 | 0.00 | 36.92 | 2.23 |
207 | 208 | 7.015584 | TGAGCTAGTAAATGAAGCCATCTATGA | 59.984 | 37.037 | 0.00 | 0.00 | 36.92 | 2.15 |
208 | 209 | 7.915930 | AGCTAGTAAATGAAGCCATCTATGAT | 58.084 | 34.615 | 0.00 | 0.00 | 36.92 | 2.45 |
209 | 210 | 9.040259 | AGCTAGTAAATGAAGCCATCTATGATA | 57.960 | 33.333 | 0.00 | 0.00 | 36.92 | 2.15 |
210 | 211 | 9.092876 | GCTAGTAAATGAAGCCATCTATGATAC | 57.907 | 37.037 | 0.00 | 0.00 | 31.40 | 2.24 |
282 | 283 | 7.588497 | TCATATGCATGACACTAGTCTAAGT | 57.412 | 36.000 | 10.16 | 0.00 | 45.20 | 2.24 |
283 | 284 | 8.011844 | TCATATGCATGACACTAGTCTAAGTT | 57.988 | 34.615 | 10.16 | 0.00 | 45.20 | 2.66 |
284 | 285 | 9.131791 | TCATATGCATGACACTAGTCTAAGTTA | 57.868 | 33.333 | 10.16 | 0.00 | 45.20 | 2.24 |
285 | 286 | 9.186323 | CATATGCATGACACTAGTCTAAGTTAC | 57.814 | 37.037 | 10.16 | 0.00 | 45.20 | 2.50 |
286 | 287 | 6.835819 | TGCATGACACTAGTCTAAGTTACT | 57.164 | 37.500 | 0.00 | 0.00 | 45.20 | 2.24 |
287 | 288 | 6.853720 | TGCATGACACTAGTCTAAGTTACTC | 58.146 | 40.000 | 0.00 | 0.00 | 45.20 | 2.59 |
288 | 289 | 6.127703 | TGCATGACACTAGTCTAAGTTACTCC | 60.128 | 42.308 | 0.00 | 0.00 | 45.20 | 3.85 |
289 | 290 | 6.680872 | GCATGACACTAGTCTAAGTTACTCCC | 60.681 | 46.154 | 0.00 | 0.00 | 45.20 | 4.30 |
290 | 291 | 5.259632 | TGACACTAGTCTAAGTTACTCCCC | 58.740 | 45.833 | 0.00 | 0.00 | 45.20 | 4.81 |
291 | 292 | 5.222192 | TGACACTAGTCTAAGTTACTCCCCA | 60.222 | 44.000 | 0.00 | 0.00 | 45.20 | 4.96 |
292 | 293 | 5.015515 | ACACTAGTCTAAGTTACTCCCCAC | 58.984 | 45.833 | 0.00 | 0.00 | 0.00 | 4.61 |
293 | 294 | 5.222296 | ACACTAGTCTAAGTTACTCCCCACT | 60.222 | 44.000 | 0.00 | 0.00 | 0.00 | 4.00 |
294 | 295 | 6.012157 | ACACTAGTCTAAGTTACTCCCCACTA | 60.012 | 42.308 | 0.00 | 0.00 | 0.00 | 2.74 |
295 | 296 | 7.061688 | CACTAGTCTAAGTTACTCCCCACTAT | 58.938 | 42.308 | 0.00 | 0.00 | 0.00 | 2.12 |
296 | 297 | 7.013464 | CACTAGTCTAAGTTACTCCCCACTATG | 59.987 | 44.444 | 0.00 | 0.00 | 0.00 | 2.23 |
297 | 298 | 6.088541 | AGTCTAAGTTACTCCCCACTATGA | 57.911 | 41.667 | 0.00 | 0.00 | 0.00 | 2.15 |
298 | 299 | 5.892686 | AGTCTAAGTTACTCCCCACTATGAC | 59.107 | 44.000 | 0.00 | 0.00 | 0.00 | 3.06 |
299 | 300 | 5.068855 | GTCTAAGTTACTCCCCACTATGACC | 59.931 | 48.000 | 0.00 | 0.00 | 0.00 | 4.02 |
300 | 301 | 3.484953 | AGTTACTCCCCACTATGACCA | 57.515 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
301 | 302 | 3.375699 | AGTTACTCCCCACTATGACCAG | 58.624 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
397 | 398 | 2.070783 | GGAATCCGCAACGAAACACTA | 58.929 | 47.619 | 0.00 | 0.00 | 0.00 | 2.74 |
524 | 525 | 3.512516 | GCGCAACATGCCTCCCTC | 61.513 | 66.667 | 0.30 | 0.00 | 41.12 | 4.30 |
528 | 529 | 1.693640 | CAACATGCCTCCCTCCCTT | 59.306 | 57.895 | 0.00 | 0.00 | 0.00 | 3.95 |
529 | 530 | 0.394899 | CAACATGCCTCCCTCCCTTC | 60.395 | 60.000 | 0.00 | 0.00 | 0.00 | 3.46 |
530 | 531 | 1.575447 | AACATGCCTCCCTCCCTTCC | 61.575 | 60.000 | 0.00 | 0.00 | 0.00 | 3.46 |
531 | 532 | 1.695597 | CATGCCTCCCTCCCTTCCT | 60.696 | 63.158 | 0.00 | 0.00 | 0.00 | 3.36 |
532 | 533 | 0.400525 | CATGCCTCCCTCCCTTCCTA | 60.401 | 60.000 | 0.00 | 0.00 | 0.00 | 2.94 |
533 | 534 | 0.346932 | ATGCCTCCCTCCCTTCCTAA | 59.653 | 55.000 | 0.00 | 0.00 | 0.00 | 2.69 |
534 | 535 | 0.620700 | TGCCTCCCTCCCTTCCTAAC | 60.621 | 60.000 | 0.00 | 0.00 | 0.00 | 2.34 |
537 | 538 | 1.002533 | TCCCTCCCTTCCTAACCCG | 59.997 | 63.158 | 0.00 | 0.00 | 0.00 | 5.28 |
565 | 567 | 4.394712 | GCGCAGGCAGGTGGTACT | 62.395 | 66.667 | 0.30 | 0.00 | 39.62 | 2.73 |
568 | 570 | 1.073199 | GCAGGCAGGTGGTACTGTT | 59.927 | 57.895 | 0.00 | 0.00 | 40.59 | 3.16 |
579 | 581 | 1.271325 | TGGTACTGTTCTACGGACCGA | 60.271 | 52.381 | 23.38 | 3.17 | 31.55 | 4.69 |
611 | 613 | 4.899239 | CACGGGCTCGGATGCTCC | 62.899 | 72.222 | 12.42 | 0.00 | 41.39 | 4.70 |
614 | 616 | 3.934962 | GGGCTCGGATGCTCCCTC | 61.935 | 72.222 | 0.00 | 0.00 | 35.87 | 4.30 |
615 | 617 | 3.157252 | GGCTCGGATGCTCCCTCA | 61.157 | 66.667 | 0.00 | 0.00 | 31.13 | 3.86 |
616 | 618 | 2.420890 | GCTCGGATGCTCCCTCAG | 59.579 | 66.667 | 0.00 | 0.00 | 31.13 | 3.35 |
617 | 619 | 2.430610 | GCTCGGATGCTCCCTCAGT | 61.431 | 63.158 | 0.00 | 0.00 | 31.13 | 3.41 |
618 | 620 | 1.739049 | CTCGGATGCTCCCTCAGTC | 59.261 | 63.158 | 0.00 | 0.00 | 31.13 | 3.51 |
708 | 710 | 2.278857 | CCTTCATCCGACGGCTCG | 60.279 | 66.667 | 9.66 | 0.00 | 39.83 | 5.03 |
710 | 712 | 4.847516 | TTCATCCGACGGCTCGCG | 62.848 | 66.667 | 9.66 | 0.00 | 38.70 | 5.87 |
767 | 769 | 1.447838 | CATCCGACGGTCAACCAGG | 60.448 | 63.158 | 14.79 | 0.81 | 35.14 | 4.45 |
774 | 776 | 4.048470 | GGTCAACCAGGCCCCCTC | 62.048 | 72.222 | 0.00 | 0.00 | 35.31 | 4.30 |
775 | 777 | 4.048470 | GTCAACCAGGCCCCCTCC | 62.048 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
776 | 778 | 4.285790 | TCAACCAGGCCCCCTCCT | 62.286 | 66.667 | 0.00 | 0.00 | 36.78 | 3.69 |
777 | 779 | 3.732849 | CAACCAGGCCCCCTCCTC | 61.733 | 72.222 | 0.00 | 0.00 | 33.25 | 3.71 |
893 | 896 | 2.353889 | CGAGCTCATGTTCCATTCCAAG | 59.646 | 50.000 | 15.40 | 0.00 | 0.00 | 3.61 |
944 | 948 | 2.892425 | GATCAGCCGAACCAGCCG | 60.892 | 66.667 | 0.00 | 0.00 | 0.00 | 5.52 |
1086 | 1407 | 2.766828 | GGAGCTGGTGATGTACTACCTT | 59.233 | 50.000 | 13.22 | 2.94 | 37.84 | 3.50 |
1293 | 1614 | 2.675371 | GGGTACTGGAAGGCCACC | 59.325 | 66.667 | 5.01 | 9.00 | 39.92 | 4.61 |
1484 | 1805 | 2.666812 | GGTAACCACCTGACCCCG | 59.333 | 66.667 | 0.00 | 0.00 | 42.11 | 5.73 |
1485 | 1806 | 2.219164 | GGTAACCACCTGACCCCGT | 61.219 | 63.158 | 0.00 | 0.00 | 42.11 | 5.28 |
1486 | 1807 | 1.294459 | GTAACCACCTGACCCCGTC | 59.706 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
1487 | 1808 | 1.156803 | TAACCACCTGACCCCGTCT | 59.843 | 57.895 | 0.00 | 0.00 | 33.15 | 4.18 |
1519 | 1857 | 4.849329 | GCGCTGATGCTTGGCTGC | 62.849 | 66.667 | 0.00 | 0.00 | 36.97 | 5.25 |
1565 | 1903 | 4.382306 | GCATTAGCGAGAGATTTACTGC | 57.618 | 45.455 | 0.00 | 0.00 | 0.00 | 4.40 |
1576 | 1914 | 6.198403 | CGAGAGATTTACTGCGCATTTAGTAA | 59.802 | 38.462 | 12.24 | 13.35 | 37.55 | 2.24 |
1579 | 1917 | 7.011482 | AGAGATTTACTGCGCATTTAGTAAAGG | 59.989 | 37.037 | 26.43 | 10.56 | 46.47 | 3.11 |
1617 | 1955 | 6.317789 | TCTTTCTTGAAATAGCAAGTGGTG | 57.682 | 37.500 | 0.00 | 0.00 | 44.30 | 4.17 |
1637 | 1975 | 6.631636 | GTGGTGTTTTAGCTTTAGAAAAGTCG | 59.368 | 38.462 | 0.00 | 0.00 | 0.00 | 4.18 |
1677 | 2015 | 1.701704 | GTGGCCATGCGAAAAAGAAG | 58.298 | 50.000 | 9.72 | 0.00 | 0.00 | 2.85 |
1678 | 2016 | 0.602562 | TGGCCATGCGAAAAAGAAGG | 59.397 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
1679 | 2017 | 0.108662 | GGCCATGCGAAAAAGAAGGG | 60.109 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
1681 | 2019 | 1.544724 | CCATGCGAAAAAGAAGGGGA | 58.455 | 50.000 | 0.00 | 0.00 | 0.00 | 4.81 |
1685 | 2024 | 3.726291 | TGCGAAAAAGAAGGGGAAAAG | 57.274 | 42.857 | 0.00 | 0.00 | 0.00 | 2.27 |
1689 | 2028 | 1.729586 | AAAAGAAGGGGAAAAGGGGC | 58.270 | 50.000 | 0.00 | 0.00 | 0.00 | 5.80 |
1691 | 2030 | 2.038975 | GAAGGGGAAAAGGGGCCC | 59.961 | 66.667 | 17.12 | 17.12 | 43.91 | 5.80 |
1703 | 2042 | 3.688159 | GGGCCCAAGTTGCAGCAG | 61.688 | 66.667 | 19.95 | 0.00 | 0.00 | 4.24 |
1704 | 2043 | 4.368543 | GGCCCAAGTTGCAGCAGC | 62.369 | 66.667 | 15.45 | 0.00 | 42.57 | 5.25 |
1877 | 2228 | 4.045636 | ACACTAGCTTTGGTTGCTTTTG | 57.954 | 40.909 | 0.00 | 0.00 | 41.46 | 2.44 |
1880 | 2231 | 5.163416 | ACACTAGCTTTGGTTGCTTTTGAAT | 60.163 | 36.000 | 0.00 | 0.00 | 41.46 | 2.57 |
1882 | 2233 | 5.754890 | ACTAGCTTTGGTTGCTTTTGAATTG | 59.245 | 36.000 | 0.00 | 0.00 | 41.46 | 2.32 |
1883 | 2234 | 4.516323 | AGCTTTGGTTGCTTTTGAATTGT | 58.484 | 34.783 | 0.00 | 0.00 | 37.52 | 2.71 |
1884 | 2235 | 4.943093 | AGCTTTGGTTGCTTTTGAATTGTT | 59.057 | 33.333 | 0.00 | 0.00 | 37.52 | 2.83 |
1885 | 2236 | 5.415389 | AGCTTTGGTTGCTTTTGAATTGTTT | 59.585 | 32.000 | 0.00 | 0.00 | 37.52 | 2.83 |
1886 | 2237 | 6.072008 | AGCTTTGGTTGCTTTTGAATTGTTTT | 60.072 | 30.769 | 0.00 | 0.00 | 37.52 | 2.43 |
1887 | 2238 | 6.585702 | GCTTTGGTTGCTTTTGAATTGTTTTT | 59.414 | 30.769 | 0.00 | 0.00 | 0.00 | 1.94 |
1934 | 2290 | 4.668289 | GAGACTTTTCTCCTCGTGATCTC | 58.332 | 47.826 | 0.00 | 0.00 | 42.42 | 2.75 |
1984 | 2340 | 2.163818 | TCTACAACAAGAAGGGCGTG | 57.836 | 50.000 | 0.00 | 0.00 | 0.00 | 5.34 |
2284 | 2640 | 3.528370 | CCCGACTTCCCGAGCGAT | 61.528 | 66.667 | 0.00 | 0.00 | 0.00 | 4.58 |
2362 | 2718 | 3.078196 | TGGGGCGGCGTCATAGAA | 61.078 | 61.111 | 15.59 | 0.00 | 0.00 | 2.10 |
2470 | 2826 | 0.038251 | TGCTCACGTACCTGCAGAAG | 60.038 | 55.000 | 17.39 | 1.02 | 0.00 | 2.85 |
2520 | 2877 | 1.383803 | CCCTCCTCCTTAGCAGCCT | 60.384 | 63.158 | 0.00 | 0.00 | 0.00 | 4.58 |
2557 | 2915 | 2.163010 | TCAGGTCTCGTGTAATTCGGTC | 59.837 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2624 | 3002 | 4.498009 | GGATTAACCCGCACAAATCTGATG | 60.498 | 45.833 | 0.00 | 0.00 | 0.00 | 3.07 |
2672 | 3056 | 0.383949 | TGCAGAGTTTTCCCAAACGC | 59.616 | 50.000 | 0.00 | 0.00 | 46.14 | 4.84 |
2678 | 3062 | 2.223745 | AGTTTTCCCAAACGCACGTAT | 58.776 | 42.857 | 0.00 | 0.00 | 46.14 | 3.06 |
2721 | 3105 | 1.350684 | GGTTTTGGATGGCATTTGGGT | 59.649 | 47.619 | 0.00 | 0.00 | 0.00 | 4.51 |
2842 | 3230 | 5.803461 | GTCGGGTAATATTTCAACTTTTGCC | 59.197 | 40.000 | 0.00 | 0.00 | 0.00 | 4.52 |
2856 | 3250 | 3.749609 | ACTTTTGCCGTGGTAGTACATTC | 59.250 | 43.478 | 2.06 | 0.00 | 0.00 | 2.67 |
2857 | 3251 | 2.389962 | TTGCCGTGGTAGTACATTCC | 57.610 | 50.000 | 2.06 | 0.00 | 0.00 | 3.01 |
2858 | 3252 | 1.268066 | TGCCGTGGTAGTACATTCCA | 58.732 | 50.000 | 2.06 | 0.00 | 0.00 | 3.53 |
2859 | 3253 | 1.624312 | TGCCGTGGTAGTACATTCCAA | 59.376 | 47.619 | 2.06 | 0.00 | 32.82 | 3.53 |
2889 | 3290 | 5.379732 | AGAAGTAGAGGTCGAACAAGAAG | 57.620 | 43.478 | 1.87 | 0.00 | 0.00 | 2.85 |
2942 | 3343 | 4.011698 | TGGATCGTGTTGTGTAGCTAGTA | 58.988 | 43.478 | 0.00 | 0.00 | 0.00 | 1.82 |
2943 | 3344 | 4.095932 | TGGATCGTGTTGTGTAGCTAGTAG | 59.904 | 45.833 | 0.00 | 0.00 | 0.00 | 2.57 |
2944 | 3345 | 4.096081 | GGATCGTGTTGTGTAGCTAGTAGT | 59.904 | 45.833 | 0.00 | 0.00 | 0.00 | 2.73 |
2951 | 3352 | 5.123502 | TGTTGTGTAGCTAGTAGTGTAGAGC | 59.876 | 44.000 | 0.00 | 0.00 | 35.07 | 4.09 |
2986 | 3388 | 9.974750 | GTTATTATTTTCTTCTCGAAGGACTTG | 57.025 | 33.333 | 6.81 | 0.00 | 38.88 | 3.16 |
3061 | 3463 | 6.372937 | TGTGTAATTGTAATTGCGAAGATGGA | 59.627 | 34.615 | 0.27 | 0.00 | 34.29 | 3.41 |
3075 | 3477 | 4.214332 | CGAAGATGGATGTGATAGAGTCGA | 59.786 | 45.833 | 0.00 | 0.00 | 0.00 | 4.20 |
3095 | 3615 | 0.033504 | TTTCAGTGGTGGTCTCTCGC | 59.966 | 55.000 | 0.00 | 0.00 | 0.00 | 5.03 |
3109 | 3629 | 1.006102 | CTCGCGTGACCTGGAAAGT | 60.006 | 57.895 | 5.77 | 0.00 | 0.00 | 2.66 |
3116 | 3637 | 3.243401 | GCGTGACCTGGAAAGTCAATTTT | 60.243 | 43.478 | 0.00 | 0.00 | 45.37 | 1.82 |
3215 | 3737 | 1.800315 | CTGATGCTTGCTTGCACGC | 60.800 | 57.895 | 15.62 | 15.62 | 46.33 | 5.34 |
3246 | 4018 | 0.675633 | GATGAGAGAGAGAGGCTGCC | 59.324 | 60.000 | 11.65 | 11.65 | 0.00 | 4.85 |
3254 | 4026 | 3.308014 | GAGAGGCTGCCGCTCTGTT | 62.308 | 63.158 | 35.59 | 12.55 | 44.99 | 3.16 |
3270 | 4042 | 5.277297 | CGCTCTGTTCTTTGTGAATTGTGTA | 60.277 | 40.000 | 0.00 | 0.00 | 36.99 | 2.90 |
3272 | 4044 | 6.580041 | GCTCTGTTCTTTGTGAATTGTGTATG | 59.420 | 38.462 | 0.00 | 0.00 | 36.99 | 2.39 |
3273 | 4045 | 7.566760 | TCTGTTCTTTGTGAATTGTGTATGT | 57.433 | 32.000 | 0.00 | 0.00 | 36.99 | 2.29 |
3274 | 4046 | 7.416817 | TCTGTTCTTTGTGAATTGTGTATGTG | 58.583 | 34.615 | 0.00 | 0.00 | 36.99 | 3.21 |
3275 | 4047 | 5.976534 | TGTTCTTTGTGAATTGTGTATGTGC | 59.023 | 36.000 | 0.00 | 0.00 | 36.99 | 4.57 |
3276 | 4048 | 5.764487 | TCTTTGTGAATTGTGTATGTGCA | 57.236 | 34.783 | 0.00 | 0.00 | 0.00 | 4.57 |
3277 | 4049 | 6.330004 | TCTTTGTGAATTGTGTATGTGCAT | 57.670 | 33.333 | 0.00 | 0.00 | 0.00 | 3.96 |
3325 | 4097 | 1.153289 | ATGGAGAGACGCCATGCAC | 60.153 | 57.895 | 6.25 | 0.00 | 42.19 | 4.57 |
3342 | 4114 | 1.411394 | CACGCATGCCACTTTTGAAG | 58.589 | 50.000 | 13.15 | 0.00 | 0.00 | 3.02 |
3343 | 4115 | 0.314935 | ACGCATGCCACTTTTGAAGG | 59.685 | 50.000 | 13.15 | 0.00 | 0.00 | 3.46 |
3344 | 4116 | 0.388907 | CGCATGCCACTTTTGAAGGG | 60.389 | 55.000 | 13.15 | 0.00 | 0.00 | 3.95 |
3348 | 4120 | 4.174305 | CCACTTTTGAAGGGGCGT | 57.826 | 55.556 | 0.00 | 0.00 | 46.91 | 5.68 |
3353 | 4129 | 0.447801 | CTTTTGAAGGGGCGTCATCG | 59.552 | 55.000 | 0.00 | 0.00 | 40.37 | 3.84 |
3356 | 4132 | 2.582498 | GAAGGGGCGTCATCGTCG | 60.582 | 66.667 | 0.00 | 0.00 | 43.10 | 5.12 |
3364 | 4140 | 0.179207 | GCGTCATCGTCGTGTACTCA | 60.179 | 55.000 | 0.00 | 0.00 | 39.49 | 3.41 |
3436 | 4212 | 0.950116 | GATGTATGCCCTGCTGAAGC | 59.050 | 55.000 | 0.00 | 0.00 | 42.50 | 3.86 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
9 | 10 | 9.148104 | GTGTAGTTTCAGGTCGATAATTTAACT | 57.852 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
10 | 11 | 8.106348 | CGTGTAGTTTCAGGTCGATAATTTAAC | 58.894 | 37.037 | 0.00 | 0.00 | 0.00 | 2.01 |
11 | 12 | 8.028354 | TCGTGTAGTTTCAGGTCGATAATTTAA | 58.972 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
12 | 13 | 7.537715 | TCGTGTAGTTTCAGGTCGATAATTTA | 58.462 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
13 | 14 | 6.392354 | TCGTGTAGTTTCAGGTCGATAATTT | 58.608 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
14 | 15 | 5.957798 | TCGTGTAGTTTCAGGTCGATAATT | 58.042 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
15 | 16 | 5.571784 | TCGTGTAGTTTCAGGTCGATAAT | 57.428 | 39.130 | 0.00 | 0.00 | 0.00 | 1.28 |
16 | 17 | 5.375417 | TTCGTGTAGTTTCAGGTCGATAA | 57.625 | 39.130 | 0.00 | 0.00 | 0.00 | 1.75 |
17 | 18 | 5.124297 | TCATTCGTGTAGTTTCAGGTCGATA | 59.876 | 40.000 | 0.00 | 0.00 | 0.00 | 2.92 |
18 | 19 | 3.928727 | TTCGTGTAGTTTCAGGTCGAT | 57.071 | 42.857 | 0.00 | 0.00 | 0.00 | 3.59 |
19 | 20 | 3.253921 | TCATTCGTGTAGTTTCAGGTCGA | 59.746 | 43.478 | 0.00 | 0.00 | 0.00 | 4.20 |
20 | 21 | 3.364023 | GTCATTCGTGTAGTTTCAGGTCG | 59.636 | 47.826 | 0.00 | 0.00 | 0.00 | 4.79 |
21 | 22 | 4.557205 | AGTCATTCGTGTAGTTTCAGGTC | 58.443 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
22 | 23 | 4.602340 | AGTCATTCGTGTAGTTTCAGGT | 57.398 | 40.909 | 0.00 | 0.00 | 0.00 | 4.00 |
23 | 24 | 7.758076 | TGTATAAGTCATTCGTGTAGTTTCAGG | 59.242 | 37.037 | 0.00 | 0.00 | 0.00 | 3.86 |
24 | 25 | 8.584600 | GTGTATAAGTCATTCGTGTAGTTTCAG | 58.415 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
25 | 26 | 7.543172 | GGTGTATAAGTCATTCGTGTAGTTTCA | 59.457 | 37.037 | 0.00 | 0.00 | 0.00 | 2.69 |
26 | 27 | 7.253552 | CGGTGTATAAGTCATTCGTGTAGTTTC | 60.254 | 40.741 | 0.00 | 0.00 | 0.00 | 2.78 |
27 | 28 | 6.529125 | CGGTGTATAAGTCATTCGTGTAGTTT | 59.471 | 38.462 | 0.00 | 0.00 | 0.00 | 2.66 |
28 | 29 | 6.032094 | CGGTGTATAAGTCATTCGTGTAGTT | 58.968 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
29 | 30 | 5.449588 | CCGGTGTATAAGTCATTCGTGTAGT | 60.450 | 44.000 | 0.00 | 0.00 | 0.00 | 2.73 |
30 | 31 | 4.974275 | CCGGTGTATAAGTCATTCGTGTAG | 59.026 | 45.833 | 0.00 | 0.00 | 0.00 | 2.74 |
31 | 32 | 4.202040 | CCCGGTGTATAAGTCATTCGTGTA | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 2.90 |
32 | 33 | 3.429822 | CCCGGTGTATAAGTCATTCGTGT | 60.430 | 47.826 | 0.00 | 0.00 | 0.00 | 4.49 |
33 | 34 | 3.120792 | CCCGGTGTATAAGTCATTCGTG | 58.879 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
34 | 35 | 3.025978 | TCCCGGTGTATAAGTCATTCGT | 58.974 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
35 | 36 | 3.378339 | GTCCCGGTGTATAAGTCATTCG | 58.622 | 50.000 | 0.00 | 0.00 | 0.00 | 3.34 |
36 | 37 | 3.378339 | CGTCCCGGTGTATAAGTCATTC | 58.622 | 50.000 | 0.00 | 0.00 | 0.00 | 2.67 |
37 | 38 | 2.101917 | CCGTCCCGGTGTATAAGTCATT | 59.898 | 50.000 | 0.00 | 0.00 | 42.73 | 2.57 |
38 | 39 | 1.684983 | CCGTCCCGGTGTATAAGTCAT | 59.315 | 52.381 | 0.00 | 0.00 | 42.73 | 3.06 |
39 | 40 | 1.105457 | CCGTCCCGGTGTATAAGTCA | 58.895 | 55.000 | 0.00 | 0.00 | 42.73 | 3.41 |
40 | 41 | 3.953201 | CCGTCCCGGTGTATAAGTC | 57.047 | 57.895 | 0.00 | 0.00 | 42.73 | 3.01 |
51 | 52 | 0.107456 | TAGCTACTACCTCCGTCCCG | 59.893 | 60.000 | 0.00 | 0.00 | 0.00 | 5.14 |
52 | 53 | 1.142667 | ACTAGCTACTACCTCCGTCCC | 59.857 | 57.143 | 0.00 | 0.00 | 0.00 | 4.46 |
53 | 54 | 2.636647 | ACTAGCTACTACCTCCGTCC | 57.363 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
54 | 55 | 4.446371 | TGTTACTAGCTACTACCTCCGTC | 58.554 | 47.826 | 0.00 | 0.00 | 0.00 | 4.79 |
55 | 56 | 4.494091 | TGTTACTAGCTACTACCTCCGT | 57.506 | 45.455 | 0.00 | 0.00 | 0.00 | 4.69 |
56 | 57 | 5.122082 | GCTATGTTACTAGCTACTACCTCCG | 59.878 | 48.000 | 0.00 | 0.00 | 40.79 | 4.63 |
57 | 58 | 5.122082 | CGCTATGTTACTAGCTACTACCTCC | 59.878 | 48.000 | 10.40 | 0.00 | 41.61 | 4.30 |
58 | 59 | 5.390779 | GCGCTATGTTACTAGCTACTACCTC | 60.391 | 48.000 | 0.00 | 0.00 | 41.61 | 3.85 |
59 | 60 | 4.455190 | GCGCTATGTTACTAGCTACTACCT | 59.545 | 45.833 | 0.00 | 0.00 | 41.61 | 3.08 |
60 | 61 | 4.455190 | AGCGCTATGTTACTAGCTACTACC | 59.545 | 45.833 | 8.99 | 0.00 | 41.61 | 3.18 |
61 | 62 | 5.409214 | AGAGCGCTATGTTACTAGCTACTAC | 59.591 | 44.000 | 11.50 | 0.00 | 41.61 | 2.73 |
62 | 63 | 5.549347 | AGAGCGCTATGTTACTAGCTACTA | 58.451 | 41.667 | 11.50 | 0.00 | 41.61 | 1.82 |
63 | 64 | 4.391155 | AGAGCGCTATGTTACTAGCTACT | 58.609 | 43.478 | 11.50 | 0.00 | 41.61 | 2.57 |
64 | 65 | 4.752661 | AGAGCGCTATGTTACTAGCTAC | 57.247 | 45.455 | 11.50 | 0.00 | 41.61 | 3.58 |
65 | 66 | 4.083961 | CGAAGAGCGCTATGTTACTAGCTA | 60.084 | 45.833 | 11.50 | 0.00 | 41.61 | 3.32 |
66 | 67 | 3.304123 | CGAAGAGCGCTATGTTACTAGCT | 60.304 | 47.826 | 11.50 | 0.00 | 41.61 | 3.32 |
67 | 68 | 2.974536 | CGAAGAGCGCTATGTTACTAGC | 59.025 | 50.000 | 11.50 | 0.00 | 40.61 | 3.42 |
68 | 69 | 4.469625 | TCGAAGAGCGCTATGTTACTAG | 57.530 | 45.455 | 11.50 | 0.15 | 40.61 | 2.57 |
83 | 84 | 6.092670 | CCACATAAGCAGAATTTTCTCGAAGA | 59.907 | 38.462 | 0.00 | 0.00 | 34.74 | 2.87 |
84 | 85 | 6.253746 | CCACATAAGCAGAATTTTCTCGAAG | 58.746 | 40.000 | 0.00 | 0.00 | 34.74 | 3.79 |
85 | 86 | 5.391950 | GCCACATAAGCAGAATTTTCTCGAA | 60.392 | 40.000 | 0.00 | 0.00 | 34.74 | 3.71 |
86 | 87 | 4.094887 | GCCACATAAGCAGAATTTTCTCGA | 59.905 | 41.667 | 0.00 | 0.00 | 34.74 | 4.04 |
87 | 88 | 4.142622 | TGCCACATAAGCAGAATTTTCTCG | 60.143 | 41.667 | 0.00 | 0.00 | 34.74 | 4.04 |
88 | 89 | 5.314923 | TGCCACATAAGCAGAATTTTCTC | 57.685 | 39.130 | 0.00 | 0.00 | 34.74 | 2.87 |
89 | 90 | 5.244626 | ACTTGCCACATAAGCAGAATTTTCT | 59.755 | 36.000 | 0.00 | 0.00 | 42.17 | 2.52 |
90 | 91 | 5.473039 | ACTTGCCACATAAGCAGAATTTTC | 58.527 | 37.500 | 0.00 | 0.00 | 42.17 | 2.29 |
91 | 92 | 5.473066 | ACTTGCCACATAAGCAGAATTTT | 57.527 | 34.783 | 0.00 | 0.00 | 42.17 | 1.82 |
92 | 93 | 6.588719 | TTACTTGCCACATAAGCAGAATTT | 57.411 | 33.333 | 0.00 | 0.00 | 42.17 | 1.82 |
93 | 94 | 6.780457 | ATTACTTGCCACATAAGCAGAATT | 57.220 | 33.333 | 0.00 | 0.00 | 42.17 | 2.17 |
94 | 95 | 6.780457 | AATTACTTGCCACATAAGCAGAAT | 57.220 | 33.333 | 0.00 | 0.00 | 42.17 | 2.40 |
95 | 96 | 7.695480 | TTAATTACTTGCCACATAAGCAGAA | 57.305 | 32.000 | 0.00 | 0.00 | 42.17 | 3.02 |
96 | 97 | 7.555914 | TCATTAATTACTTGCCACATAAGCAGA | 59.444 | 33.333 | 0.00 | 0.00 | 42.17 | 4.26 |
97 | 98 | 7.706159 | TCATTAATTACTTGCCACATAAGCAG | 58.294 | 34.615 | 0.00 | 0.00 | 42.17 | 4.24 |
98 | 99 | 7.555914 | TCTCATTAATTACTTGCCACATAAGCA | 59.444 | 33.333 | 0.00 | 0.00 | 38.81 | 3.91 |
99 | 100 | 7.930217 | TCTCATTAATTACTTGCCACATAAGC | 58.070 | 34.615 | 0.00 | 0.00 | 0.00 | 3.09 |
100 | 101 | 8.562892 | CCTCTCATTAATTACTTGCCACATAAG | 58.437 | 37.037 | 0.00 | 0.00 | 0.00 | 1.73 |
101 | 102 | 8.052748 | ACCTCTCATTAATTACTTGCCACATAA | 58.947 | 33.333 | 0.00 | 0.00 | 0.00 | 1.90 |
102 | 103 | 7.498900 | CACCTCTCATTAATTACTTGCCACATA | 59.501 | 37.037 | 0.00 | 0.00 | 0.00 | 2.29 |
103 | 104 | 6.319658 | CACCTCTCATTAATTACTTGCCACAT | 59.680 | 38.462 | 0.00 | 0.00 | 0.00 | 3.21 |
104 | 105 | 5.647658 | CACCTCTCATTAATTACTTGCCACA | 59.352 | 40.000 | 0.00 | 0.00 | 0.00 | 4.17 |
105 | 106 | 5.066505 | CCACCTCTCATTAATTACTTGCCAC | 59.933 | 44.000 | 0.00 | 0.00 | 0.00 | 5.01 |
106 | 107 | 5.192927 | CCACCTCTCATTAATTACTTGCCA | 58.807 | 41.667 | 0.00 | 0.00 | 0.00 | 4.92 |
107 | 108 | 5.193679 | ACCACCTCTCATTAATTACTTGCC | 58.806 | 41.667 | 0.00 | 0.00 | 0.00 | 4.52 |
108 | 109 | 7.335924 | TGTTACCACCTCTCATTAATTACTTGC | 59.664 | 37.037 | 0.00 | 0.00 | 0.00 | 4.01 |
109 | 110 | 8.786826 | TGTTACCACCTCTCATTAATTACTTG | 57.213 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
140 | 141 | 8.947657 | CTTGGAAAGCGCTATGTTACAGTAACA | 61.948 | 40.741 | 25.09 | 25.09 | 44.55 | 2.41 |
141 | 142 | 4.628333 | TGGAAAGCGCTATGTTACAGTAAC | 59.372 | 41.667 | 12.05 | 15.58 | 39.11 | 2.50 |
142 | 143 | 4.823157 | TGGAAAGCGCTATGTTACAGTAA | 58.177 | 39.130 | 12.05 | 0.00 | 0.00 | 2.24 |
143 | 144 | 4.459390 | TGGAAAGCGCTATGTTACAGTA | 57.541 | 40.909 | 12.05 | 0.00 | 0.00 | 2.74 |
144 | 145 | 3.328382 | TGGAAAGCGCTATGTTACAGT | 57.672 | 42.857 | 12.05 | 0.00 | 0.00 | 3.55 |
145 | 146 | 3.932710 | TCTTGGAAAGCGCTATGTTACAG | 59.067 | 43.478 | 12.05 | 3.17 | 45.70 | 2.74 |
146 | 147 | 3.682858 | GTCTTGGAAAGCGCTATGTTACA | 59.317 | 43.478 | 12.05 | 5.56 | 45.70 | 2.41 |
147 | 148 | 3.682858 | TGTCTTGGAAAGCGCTATGTTAC | 59.317 | 43.478 | 12.05 | 2.15 | 45.70 | 2.50 |
148 | 149 | 3.932822 | TGTCTTGGAAAGCGCTATGTTA | 58.067 | 40.909 | 12.05 | 0.00 | 45.70 | 2.41 |
149 | 150 | 2.778299 | TGTCTTGGAAAGCGCTATGTT | 58.222 | 42.857 | 12.05 | 0.00 | 45.70 | 2.71 |
150 | 151 | 2.472695 | TGTCTTGGAAAGCGCTATGT | 57.527 | 45.000 | 12.05 | 0.00 | 45.70 | 2.29 |
151 | 152 | 3.002791 | TCTTGTCTTGGAAAGCGCTATG | 58.997 | 45.455 | 12.05 | 0.00 | 45.70 | 2.23 |
152 | 153 | 3.334583 | TCTTGTCTTGGAAAGCGCTAT | 57.665 | 42.857 | 12.05 | 0.00 | 45.70 | 2.97 |
153 | 154 | 2.831685 | TCTTGTCTTGGAAAGCGCTA | 57.168 | 45.000 | 12.05 | 0.00 | 45.70 | 4.26 |
154 | 155 | 1.808945 | CATCTTGTCTTGGAAAGCGCT | 59.191 | 47.619 | 2.64 | 2.64 | 45.70 | 5.92 |
155 | 156 | 1.806542 | TCATCTTGTCTTGGAAAGCGC | 59.193 | 47.619 | 0.00 | 0.00 | 45.70 | 5.92 |
156 | 157 | 3.070018 | ACTCATCTTGTCTTGGAAAGCG | 58.930 | 45.455 | 0.00 | 0.00 | 45.70 | 4.68 |
157 | 158 | 4.322567 | AGACTCATCTTGTCTTGGAAAGC | 58.677 | 43.478 | 0.00 | 0.00 | 45.70 | 3.51 |
158 | 159 | 7.326454 | TCATAGACTCATCTTGTCTTGGAAAG | 58.674 | 38.462 | 1.67 | 0.00 | 41.45 | 2.62 |
159 | 160 | 7.244886 | TCATAGACTCATCTTGTCTTGGAAA | 57.755 | 36.000 | 1.67 | 0.00 | 41.45 | 3.13 |
160 | 161 | 6.629068 | GCTCATAGACTCATCTTGTCTTGGAA | 60.629 | 42.308 | 1.67 | 0.00 | 41.45 | 3.53 |
161 | 162 | 5.163468 | GCTCATAGACTCATCTTGTCTTGGA | 60.163 | 44.000 | 1.67 | 0.74 | 41.45 | 3.53 |
162 | 163 | 5.049167 | GCTCATAGACTCATCTTGTCTTGG | 58.951 | 45.833 | 1.67 | 0.00 | 41.45 | 3.61 |
163 | 164 | 5.904941 | AGCTCATAGACTCATCTTGTCTTG | 58.095 | 41.667 | 1.67 | 2.00 | 41.45 | 3.02 |
164 | 165 | 6.833416 | ACTAGCTCATAGACTCATCTTGTCTT | 59.167 | 38.462 | 0.00 | 0.00 | 41.45 | 3.01 |
165 | 166 | 6.364701 | ACTAGCTCATAGACTCATCTTGTCT | 58.635 | 40.000 | 0.00 | 0.00 | 45.48 | 3.41 |
166 | 167 | 6.633500 | ACTAGCTCATAGACTCATCTTGTC | 57.367 | 41.667 | 0.00 | 0.00 | 36.29 | 3.18 |
167 | 168 | 8.526667 | TTTACTAGCTCATAGACTCATCTTGT | 57.473 | 34.615 | 0.00 | 0.00 | 36.29 | 3.16 |
168 | 169 | 9.409312 | CATTTACTAGCTCATAGACTCATCTTG | 57.591 | 37.037 | 0.00 | 0.00 | 36.29 | 3.02 |
169 | 170 | 9.360901 | TCATTTACTAGCTCATAGACTCATCTT | 57.639 | 33.333 | 0.00 | 0.00 | 36.29 | 2.40 |
170 | 171 | 8.932434 | TCATTTACTAGCTCATAGACTCATCT | 57.068 | 34.615 | 0.00 | 0.00 | 39.15 | 2.90 |
171 | 172 | 9.624697 | CTTCATTTACTAGCTCATAGACTCATC | 57.375 | 37.037 | 0.00 | 0.00 | 35.30 | 2.92 |
172 | 173 | 8.087750 | GCTTCATTTACTAGCTCATAGACTCAT | 58.912 | 37.037 | 0.00 | 0.00 | 35.30 | 2.90 |
173 | 174 | 7.429633 | GCTTCATTTACTAGCTCATAGACTCA | 58.570 | 38.462 | 0.00 | 0.00 | 35.30 | 3.41 |
174 | 175 | 6.866248 | GGCTTCATTTACTAGCTCATAGACTC | 59.134 | 42.308 | 0.00 | 0.00 | 35.30 | 3.36 |
175 | 176 | 6.325028 | TGGCTTCATTTACTAGCTCATAGACT | 59.675 | 38.462 | 0.00 | 0.00 | 35.30 | 3.24 |
176 | 177 | 6.516718 | TGGCTTCATTTACTAGCTCATAGAC | 58.483 | 40.000 | 0.00 | 0.00 | 35.30 | 2.59 |
177 | 178 | 6.731292 | TGGCTTCATTTACTAGCTCATAGA | 57.269 | 37.500 | 0.00 | 0.00 | 35.30 | 1.98 |
178 | 179 | 7.385267 | AGATGGCTTCATTTACTAGCTCATAG | 58.615 | 38.462 | 0.00 | 0.00 | 37.53 | 2.23 |
179 | 180 | 7.308450 | AGATGGCTTCATTTACTAGCTCATA | 57.692 | 36.000 | 0.00 | 0.00 | 35.30 | 2.15 |
180 | 181 | 6.185114 | AGATGGCTTCATTTACTAGCTCAT | 57.815 | 37.500 | 0.00 | 0.00 | 35.30 | 2.90 |
181 | 182 | 5.620738 | AGATGGCTTCATTTACTAGCTCA | 57.379 | 39.130 | 0.00 | 0.00 | 35.30 | 4.26 |
182 | 183 | 7.382110 | TCATAGATGGCTTCATTTACTAGCTC | 58.618 | 38.462 | 0.00 | 0.00 | 35.30 | 4.09 |
183 | 184 | 7.308450 | TCATAGATGGCTTCATTTACTAGCT | 57.692 | 36.000 | 3.03 | 0.00 | 35.30 | 3.32 |
184 | 185 | 9.092876 | GTATCATAGATGGCTTCATTTACTAGC | 57.907 | 37.037 | 3.03 | 0.00 | 0.00 | 3.42 |
258 | 259 | 7.588497 | ACTTAGACTAGTGTCATGCATATGA | 57.412 | 36.000 | 6.97 | 0.00 | 45.20 | 2.15 |
259 | 260 | 9.186323 | GTAACTTAGACTAGTGTCATGCATATG | 57.814 | 37.037 | 0.00 | 0.00 | 45.20 | 1.78 |
260 | 261 | 9.137459 | AGTAACTTAGACTAGTGTCATGCATAT | 57.863 | 33.333 | 0.00 | 0.00 | 45.20 | 1.78 |
261 | 262 | 8.521170 | AGTAACTTAGACTAGTGTCATGCATA | 57.479 | 34.615 | 0.00 | 0.00 | 45.20 | 3.14 |
262 | 263 | 7.411486 | AGTAACTTAGACTAGTGTCATGCAT | 57.589 | 36.000 | 0.00 | 0.00 | 45.20 | 3.96 |
263 | 264 | 6.127703 | GGAGTAACTTAGACTAGTGTCATGCA | 60.128 | 42.308 | 0.00 | 0.00 | 45.20 | 3.96 |
264 | 265 | 6.267070 | GGAGTAACTTAGACTAGTGTCATGC | 58.733 | 44.000 | 0.00 | 0.00 | 45.20 | 4.06 |
265 | 266 | 6.183360 | GGGGAGTAACTTAGACTAGTGTCATG | 60.183 | 46.154 | 0.00 | 0.00 | 45.20 | 3.07 |
266 | 267 | 5.892686 | GGGGAGTAACTTAGACTAGTGTCAT | 59.107 | 44.000 | 0.00 | 0.00 | 45.20 | 3.06 |
267 | 268 | 5.222192 | TGGGGAGTAACTTAGACTAGTGTCA | 60.222 | 44.000 | 0.00 | 0.00 | 45.20 | 3.58 |
268 | 269 | 5.125257 | GTGGGGAGTAACTTAGACTAGTGTC | 59.875 | 48.000 | 0.00 | 0.00 | 43.22 | 3.67 |
269 | 270 | 5.015515 | GTGGGGAGTAACTTAGACTAGTGT | 58.984 | 45.833 | 0.00 | 0.00 | 0.00 | 3.55 |
270 | 271 | 5.262804 | AGTGGGGAGTAACTTAGACTAGTG | 58.737 | 45.833 | 0.00 | 0.00 | 0.00 | 2.74 |
271 | 272 | 5.533333 | AGTGGGGAGTAACTTAGACTAGT | 57.467 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
272 | 273 | 7.229106 | GTCATAGTGGGGAGTAACTTAGACTAG | 59.771 | 44.444 | 0.00 | 0.00 | 31.58 | 2.57 |
273 | 274 | 7.059156 | GTCATAGTGGGGAGTAACTTAGACTA | 58.941 | 42.308 | 0.00 | 0.00 | 31.58 | 2.59 |
274 | 275 | 5.892686 | GTCATAGTGGGGAGTAACTTAGACT | 59.107 | 44.000 | 0.00 | 0.00 | 31.58 | 3.24 |
275 | 276 | 5.068855 | GGTCATAGTGGGGAGTAACTTAGAC | 59.931 | 48.000 | 0.00 | 0.00 | 32.58 | 2.59 |
276 | 277 | 5.206587 | GGTCATAGTGGGGAGTAACTTAGA | 58.793 | 45.833 | 0.00 | 0.00 | 0.00 | 2.10 |
277 | 278 | 4.960469 | TGGTCATAGTGGGGAGTAACTTAG | 59.040 | 45.833 | 0.00 | 0.00 | 0.00 | 2.18 |
278 | 279 | 4.950361 | TGGTCATAGTGGGGAGTAACTTA | 58.050 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
279 | 280 | 3.775316 | CTGGTCATAGTGGGGAGTAACTT | 59.225 | 47.826 | 0.00 | 0.00 | 0.00 | 2.66 |
280 | 281 | 3.375699 | CTGGTCATAGTGGGGAGTAACT | 58.624 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
281 | 282 | 2.158943 | GCTGGTCATAGTGGGGAGTAAC | 60.159 | 54.545 | 0.00 | 0.00 | 0.00 | 2.50 |
282 | 283 | 2.116238 | GCTGGTCATAGTGGGGAGTAA | 58.884 | 52.381 | 0.00 | 0.00 | 0.00 | 2.24 |
283 | 284 | 1.691482 | GGCTGGTCATAGTGGGGAGTA | 60.691 | 57.143 | 0.00 | 0.00 | 0.00 | 2.59 |
284 | 285 | 0.983378 | GGCTGGTCATAGTGGGGAGT | 60.983 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
285 | 286 | 0.692419 | AGGCTGGTCATAGTGGGGAG | 60.692 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
286 | 287 | 0.639943 | TAGGCTGGTCATAGTGGGGA | 59.360 | 55.000 | 0.00 | 0.00 | 0.00 | 4.81 |
287 | 288 | 1.507140 | TTAGGCTGGTCATAGTGGGG | 58.493 | 55.000 | 0.00 | 0.00 | 0.00 | 4.96 |
288 | 289 | 3.545703 | CTTTTAGGCTGGTCATAGTGGG | 58.454 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
289 | 290 | 2.945668 | GCTTTTAGGCTGGTCATAGTGG | 59.054 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
290 | 291 | 3.878778 | AGCTTTTAGGCTGGTCATAGTG | 58.121 | 45.455 | 0.00 | 0.00 | 41.43 | 2.74 |
300 | 301 | 2.508526 | CTTGTGGTCAGCTTTTAGGCT | 58.491 | 47.619 | 0.00 | 0.00 | 44.10 | 4.58 |
301 | 302 | 1.541588 | CCTTGTGGTCAGCTTTTAGGC | 59.458 | 52.381 | 0.00 | 0.00 | 0.00 | 3.93 |
524 | 525 | 3.805497 | GCCCCGGGTTAGGAAGGG | 61.805 | 72.222 | 21.85 | 0.73 | 43.41 | 3.95 |
550 | 552 | 0.955919 | GAACAGTACCACCTGCCTGC | 60.956 | 60.000 | 0.00 | 0.00 | 35.83 | 4.85 |
560 | 562 | 1.131315 | GTCGGTCCGTAGAACAGTACC | 59.869 | 57.143 | 11.88 | 0.00 | 0.00 | 3.34 |
561 | 563 | 1.131315 | GGTCGGTCCGTAGAACAGTAC | 59.869 | 57.143 | 11.88 | 0.00 | 0.00 | 2.73 |
562 | 564 | 1.453155 | GGTCGGTCCGTAGAACAGTA | 58.547 | 55.000 | 11.88 | 0.00 | 0.00 | 2.74 |
563 | 565 | 1.246737 | GGGTCGGTCCGTAGAACAGT | 61.247 | 60.000 | 11.88 | 0.00 | 37.00 | 3.55 |
564 | 566 | 0.964358 | AGGGTCGGTCCGTAGAACAG | 60.964 | 60.000 | 11.88 | 0.00 | 37.00 | 3.16 |
565 | 567 | 0.962356 | GAGGGTCGGTCCGTAGAACA | 60.962 | 60.000 | 11.88 | 0.00 | 37.00 | 3.18 |
568 | 570 | 2.124983 | CGAGGGTCGGTCCGTAGA | 60.125 | 66.667 | 11.88 | 0.00 | 36.00 | 2.59 |
579 | 581 | 1.319541 | CCGTGAGATATGACGAGGGT | 58.680 | 55.000 | 0.00 | 0.00 | 37.81 | 4.34 |
611 | 613 | 2.801631 | GGATGGCGAGGGACTGAGG | 61.802 | 68.421 | 0.00 | 0.00 | 41.55 | 3.86 |
612 | 614 | 2.801631 | GGGATGGCGAGGGACTGAG | 61.802 | 68.421 | 0.00 | 0.00 | 41.55 | 3.35 |
613 | 615 | 2.764128 | GGGATGGCGAGGGACTGA | 60.764 | 66.667 | 0.00 | 0.00 | 41.55 | 3.41 |
614 | 616 | 3.083349 | TGGGATGGCGAGGGACTG | 61.083 | 66.667 | 0.00 | 0.00 | 41.55 | 3.51 |
616 | 618 | 2.764128 | TCTGGGATGGCGAGGGAC | 60.764 | 66.667 | 0.00 | 0.00 | 0.00 | 4.46 |
617 | 619 | 2.764128 | GTCTGGGATGGCGAGGGA | 60.764 | 66.667 | 0.00 | 0.00 | 0.00 | 4.20 |
618 | 620 | 4.227134 | CGTCTGGGATGGCGAGGG | 62.227 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
772 | 774 | 1.229984 | AAGTTGGGGAGGGGAGGAG | 60.230 | 63.158 | 0.00 | 0.00 | 0.00 | 3.69 |
773 | 775 | 1.541368 | CAAGTTGGGGAGGGGAGGA | 60.541 | 63.158 | 0.00 | 0.00 | 0.00 | 3.71 |
774 | 776 | 3.090765 | CAAGTTGGGGAGGGGAGG | 58.909 | 66.667 | 0.00 | 0.00 | 0.00 | 4.30 |
775 | 777 | 2.356667 | GCAAGTTGGGGAGGGGAG | 59.643 | 66.667 | 4.75 | 0.00 | 0.00 | 4.30 |
776 | 778 | 2.451493 | TGCAAGTTGGGGAGGGGA | 60.451 | 61.111 | 4.75 | 0.00 | 0.00 | 4.81 |
777 | 779 | 2.283173 | GTGCAAGTTGGGGAGGGG | 60.283 | 66.667 | 4.75 | 0.00 | 0.00 | 4.79 |
778 | 780 | 2.672996 | CGTGCAAGTTGGGGAGGG | 60.673 | 66.667 | 4.75 | 0.00 | 0.00 | 4.30 |
840 | 843 | 2.034305 | CCGTATATATAGGCGGAGGTGC | 59.966 | 54.545 | 17.80 | 0.00 | 46.33 | 5.01 |
841 | 844 | 2.621998 | CCCGTATATATAGGCGGAGGTG | 59.378 | 54.545 | 22.01 | 7.80 | 46.33 | 4.00 |
842 | 845 | 2.941480 | CCCGTATATATAGGCGGAGGT | 58.059 | 52.381 | 22.01 | 0.00 | 46.33 | 3.85 |
843 | 846 | 1.612463 | GCCCGTATATATAGGCGGAGG | 59.388 | 57.143 | 22.01 | 10.61 | 46.33 | 4.30 |
944 | 948 | 0.819666 | GGGAGATTGGTTGGATCGGC | 60.820 | 60.000 | 0.00 | 0.00 | 0.00 | 5.54 |
947 | 951 | 1.811941 | GCTCGGGAGATTGGTTGGATC | 60.812 | 57.143 | 0.00 | 0.00 | 38.80 | 3.36 |
948 | 952 | 0.181350 | GCTCGGGAGATTGGTTGGAT | 59.819 | 55.000 | 0.00 | 0.00 | 38.80 | 3.41 |
949 | 953 | 1.602237 | GCTCGGGAGATTGGTTGGA | 59.398 | 57.895 | 0.00 | 0.00 | 38.80 | 3.53 |
951 | 955 | 2.464459 | GCGCTCGGGAGATTGGTTG | 61.464 | 63.158 | 0.00 | 0.00 | 38.80 | 3.77 |
1478 | 1799 | 0.322636 | TGACAGAGAGAGACGGGGTC | 60.323 | 60.000 | 0.00 | 0.00 | 0.00 | 4.46 |
1479 | 1800 | 0.112606 | TTGACAGAGAGAGACGGGGT | 59.887 | 55.000 | 0.00 | 0.00 | 0.00 | 4.95 |
1482 | 1803 | 2.479389 | GCAGATTGACAGAGAGAGACGG | 60.479 | 54.545 | 0.00 | 0.00 | 0.00 | 4.79 |
1483 | 1804 | 2.790812 | CGCAGATTGACAGAGAGAGACG | 60.791 | 54.545 | 0.00 | 0.00 | 0.00 | 4.18 |
1484 | 1805 | 2.796304 | CGCAGATTGACAGAGAGAGAC | 58.204 | 52.381 | 0.00 | 0.00 | 0.00 | 3.36 |
1485 | 1806 | 1.133982 | GCGCAGATTGACAGAGAGAGA | 59.866 | 52.381 | 0.30 | 0.00 | 0.00 | 3.10 |
1486 | 1807 | 1.134753 | AGCGCAGATTGACAGAGAGAG | 59.865 | 52.381 | 11.47 | 0.00 | 0.00 | 3.20 |
1487 | 1808 | 1.135170 | CAGCGCAGATTGACAGAGAGA | 60.135 | 52.381 | 11.47 | 0.00 | 0.00 | 3.10 |
1519 | 1857 | 4.489306 | AAGAGGAAGGGATTAAACGAGG | 57.511 | 45.455 | 0.00 | 0.00 | 0.00 | 4.63 |
1563 | 1901 | 4.033587 | GTCGATTCCTTTACTAAATGCGCA | 59.966 | 41.667 | 14.96 | 14.96 | 0.00 | 6.09 |
1565 | 1903 | 4.317839 | CGGTCGATTCCTTTACTAAATGCG | 60.318 | 45.833 | 0.00 | 0.00 | 0.00 | 4.73 |
1576 | 1914 | 1.041437 | GATCTCCCGGTCGATTCCTT | 58.959 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
1579 | 1917 | 2.362717 | AGAAAGATCTCCCGGTCGATTC | 59.637 | 50.000 | 0.00 | 2.32 | 0.00 | 2.52 |
1617 | 1955 | 7.060748 | GCCAATCGACTTTTCTAAAGCTAAAAC | 59.939 | 37.037 | 0.00 | 0.00 | 0.00 | 2.43 |
1637 | 1975 | 0.676782 | ACGCACCTAACCTGCCAATC | 60.677 | 55.000 | 0.00 | 0.00 | 0.00 | 2.67 |
1677 | 2015 | 2.284625 | CTTGGGCCCCTTTTCCCC | 60.285 | 66.667 | 22.27 | 0.00 | 41.92 | 4.81 |
1678 | 2016 | 1.152118 | AACTTGGGCCCCTTTTCCC | 60.152 | 57.895 | 22.27 | 0.00 | 42.93 | 3.97 |
1679 | 2017 | 2.057830 | CAACTTGGGCCCCTTTTCC | 58.942 | 57.895 | 22.27 | 0.00 | 0.00 | 3.13 |
1681 | 2019 | 1.383803 | TGCAACTTGGGCCCCTTTT | 60.384 | 52.632 | 22.27 | 6.13 | 0.00 | 2.27 |
1702 | 2041 | 1.598130 | GGGACAACTTGAGCGTGCT | 60.598 | 57.895 | 0.00 | 0.00 | 0.00 | 4.40 |
1703 | 2042 | 1.166531 | AAGGGACAACTTGAGCGTGC | 61.167 | 55.000 | 0.00 | 0.00 | 0.00 | 5.34 |
1704 | 2043 | 1.264288 | GAAAGGGACAACTTGAGCGTG | 59.736 | 52.381 | 0.00 | 0.00 | 0.00 | 5.34 |
1745 | 2084 | 3.033764 | TGCTTTCCGCACGTCGAC | 61.034 | 61.111 | 5.18 | 5.18 | 45.47 | 4.20 |
1927 | 2283 | 1.138464 | TCATCCAGCTGCAGAGATCAC | 59.862 | 52.381 | 20.43 | 0.00 | 0.00 | 3.06 |
1934 | 2290 | 1.451567 | CCCAGTCATCCAGCTGCAG | 60.452 | 63.158 | 10.11 | 10.11 | 0.00 | 4.41 |
1984 | 2340 | 1.650536 | CGTGTCGTACCGCTCGATC | 60.651 | 63.158 | 0.00 | 0.00 | 39.45 | 3.69 |
2194 | 2550 | 0.798776 | GCATGGAGTGGTTCGAGTTG | 59.201 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2284 | 2640 | 1.170919 | GGCTCTCCGCGTAGTCCATA | 61.171 | 60.000 | 4.92 | 0.00 | 40.44 | 2.74 |
2446 | 2802 | 1.084370 | GCAGGTACGTGAGCATGTCC | 61.084 | 60.000 | 19.35 | 1.72 | 0.00 | 4.02 |
2520 | 2877 | 2.631062 | ACCTGACGAACATGTTAGTGGA | 59.369 | 45.455 | 26.20 | 12.92 | 0.00 | 4.02 |
2557 | 2915 | 0.667993 | TTGGTTTCGGAAGCTTGCAG | 59.332 | 50.000 | 18.65 | 10.68 | 34.41 | 4.41 |
2672 | 3056 | 4.280174 | AGGCTAACACCTGGTATATACGTG | 59.720 | 45.833 | 14.31 | 14.31 | 39.13 | 4.49 |
2678 | 3062 | 3.022557 | ACGAGGCTAACACCTGGTATA | 57.977 | 47.619 | 0.00 | 0.00 | 45.79 | 1.47 |
2721 | 3105 | 1.429930 | TCCTGGCTTGTACCAAGTCA | 58.570 | 50.000 | 10.50 | 10.50 | 39.86 | 3.41 |
2842 | 3230 | 3.322211 | TGGTTGGAATGTACTACCACG | 57.678 | 47.619 | 5.92 | 0.00 | 34.13 | 4.94 |
2856 | 3250 | 5.581085 | CGACCTCTACTTCTAATTTGGTTGG | 59.419 | 44.000 | 0.00 | 0.00 | 0.00 | 3.77 |
2857 | 3251 | 6.395629 | TCGACCTCTACTTCTAATTTGGTTG | 58.604 | 40.000 | 0.00 | 0.00 | 0.00 | 3.77 |
2858 | 3252 | 6.600882 | TCGACCTCTACTTCTAATTTGGTT | 57.399 | 37.500 | 0.00 | 0.00 | 0.00 | 3.67 |
2859 | 3253 | 6.014840 | TGTTCGACCTCTACTTCTAATTTGGT | 60.015 | 38.462 | 0.00 | 0.00 | 0.00 | 3.67 |
2889 | 3290 | 5.901552 | TGAACCCAAAACTTCAGTTTCATC | 58.098 | 37.500 | 5.41 | 2.05 | 46.47 | 2.92 |
2942 | 3343 | 0.542232 | ACCCGAACCAGCTCTACACT | 60.542 | 55.000 | 0.00 | 0.00 | 0.00 | 3.55 |
2943 | 3344 | 0.320697 | AACCCGAACCAGCTCTACAC | 59.679 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2944 | 3345 | 1.927487 | TAACCCGAACCAGCTCTACA | 58.073 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2951 | 3352 | 7.465513 | CGAGAAGAAAATAATAACCCGAACCAG | 60.466 | 40.741 | 0.00 | 0.00 | 0.00 | 4.00 |
2986 | 3388 | 1.961277 | CTGCCACGACACTGAACCC | 60.961 | 63.158 | 0.00 | 0.00 | 0.00 | 4.11 |
3061 | 3463 | 5.127845 | ACCACTGAAATCGACTCTATCACAT | 59.872 | 40.000 | 0.00 | 0.00 | 0.00 | 3.21 |
3075 | 3477 | 1.338200 | GCGAGAGACCACCACTGAAAT | 60.338 | 52.381 | 0.00 | 0.00 | 0.00 | 2.17 |
3095 | 3615 | 4.568152 | AAAATTGACTTTCCAGGTCACG | 57.432 | 40.909 | 0.00 | 0.00 | 42.41 | 4.35 |
3203 | 3725 | 1.369689 | GTGTGAGCGTGCAAGCAAG | 60.370 | 57.895 | 26.30 | 3.58 | 40.15 | 4.01 |
3215 | 3737 | 2.087646 | TCTCTCATCCAGTCGTGTGAG | 58.912 | 52.381 | 0.00 | 0.00 | 39.47 | 3.51 |
3246 | 4018 | 3.970610 | CACAATTCACAAAGAACAGAGCG | 59.029 | 43.478 | 0.00 | 0.00 | 39.49 | 5.03 |
3254 | 4026 | 5.764487 | TGCACATACACAATTCACAAAGA | 57.236 | 34.783 | 0.00 | 0.00 | 0.00 | 2.52 |
3270 | 4042 | 4.084287 | AGATTCAGAACCAACATGCACAT | 58.916 | 39.130 | 0.00 | 0.00 | 0.00 | 3.21 |
3272 | 4044 | 4.697352 | ACTAGATTCAGAACCAACATGCAC | 59.303 | 41.667 | 0.00 | 0.00 | 0.00 | 4.57 |
3273 | 4045 | 4.910195 | ACTAGATTCAGAACCAACATGCA | 58.090 | 39.130 | 0.00 | 0.00 | 0.00 | 3.96 |
3274 | 4046 | 4.937620 | TGACTAGATTCAGAACCAACATGC | 59.062 | 41.667 | 0.00 | 0.00 | 0.00 | 4.06 |
3275 | 4047 | 6.457934 | GCATGACTAGATTCAGAACCAACATG | 60.458 | 42.308 | 0.00 | 0.00 | 35.09 | 3.21 |
3276 | 4048 | 5.587844 | GCATGACTAGATTCAGAACCAACAT | 59.412 | 40.000 | 0.00 | 0.00 | 0.00 | 2.71 |
3277 | 4049 | 4.937620 | GCATGACTAGATTCAGAACCAACA | 59.062 | 41.667 | 0.00 | 0.00 | 0.00 | 3.33 |
3325 | 4097 | 0.388907 | CCCTTCAAAAGTGGCATGCG | 60.389 | 55.000 | 12.44 | 0.00 | 0.00 | 4.73 |
3342 | 4114 | 3.055080 | TACACGACGATGACGCCCC | 62.055 | 63.158 | 0.00 | 0.00 | 43.96 | 5.80 |
3343 | 4115 | 1.870901 | GTACACGACGATGACGCCC | 60.871 | 63.158 | 0.00 | 0.00 | 43.96 | 6.13 |
3344 | 4116 | 0.860618 | GAGTACACGACGATGACGCC | 60.861 | 60.000 | 0.00 | 0.00 | 43.96 | 5.68 |
3345 | 4117 | 0.179207 | TGAGTACACGACGATGACGC | 60.179 | 55.000 | 0.00 | 0.00 | 43.96 | 5.19 |
3346 | 4118 | 2.236741 | TTGAGTACACGACGATGACG | 57.763 | 50.000 | 0.00 | 0.00 | 45.75 | 4.35 |
3347 | 4119 | 3.979495 | ACTTTTGAGTACACGACGATGAC | 59.021 | 43.478 | 0.00 | 0.00 | 0.00 | 3.06 |
3348 | 4120 | 3.978855 | CACTTTTGAGTACACGACGATGA | 59.021 | 43.478 | 0.00 | 0.00 | 0.00 | 2.92 |
3353 | 4129 | 4.608445 | GCATCACACTTTTGAGTACACGAC | 60.608 | 45.833 | 0.00 | 0.00 | 0.00 | 4.34 |
3356 | 4132 | 3.815401 | AGGCATCACACTTTTGAGTACAC | 59.185 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
3364 | 4140 | 5.452356 | CCAAAAGAGAAGGCATCACACTTTT | 60.452 | 40.000 | 12.63 | 12.63 | 37.97 | 2.27 |
3436 | 4212 | 0.524862 | AGTGTTCCTACCTACGTGCG | 59.475 | 55.000 | 0.00 | 0.00 | 0.00 | 5.34 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.