Multiple sequence alignment - TraesCS4A01G216900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G216900 chr4A 100.000 5621 0 0 1 5621 515783750 515778130 0.000000e+00 10381
1 TraesCS4A01G216900 chr4A 96.364 110 4 0 2644 2753 239632708 239632817 1.240000e-41 182
2 TraesCS4A01G216900 chr4D 90.120 2490 134 50 208 2654 67118930 67116510 0.000000e+00 3133
3 TraesCS4A01G216900 chr4D 87.570 2679 154 74 2792 5433 67116457 67113921 0.000000e+00 2937
4 TraesCS4A01G216900 chr4D 82.873 181 11 6 5437 5616 67113638 67113477 1.630000e-30 145
5 TraesCS4A01G216900 chr4B 86.986 2505 151 77 2756 5238 98697515 98695164 0.000000e+00 2658
6 TraesCS4A01G216900 chr4B 91.429 1155 66 16 1513 2654 98698642 98697508 0.000000e+00 1554
7 TraesCS4A01G216900 chr4B 88.034 1312 74 32 208 1499 98700192 98698944 0.000000e+00 1476
8 TraesCS4A01G216900 chr4B 86.869 198 18 2 5244 5433 98695056 98694859 1.230000e-51 215
9 TraesCS4A01G216900 chr7A 95.690 116 3 2 2643 2758 473023824 473023711 9.620000e-43 185
10 TraesCS4A01G216900 chr7A 93.333 120 6 2 2640 2758 133053224 133053342 5.790000e-40 176
11 TraesCS4A01G216900 chr2A 96.429 112 4 0 2642 2753 662230320 662230431 9.620000e-43 185
12 TraesCS4A01G216900 chr5D 96.429 112 3 1 2640 2750 560426195 560426084 3.460000e-42 183
13 TraesCS4A01G216900 chr6A 95.575 113 5 0 2644 2756 250834622 250834510 1.240000e-41 182
14 TraesCS4A01G216900 chr3B 92.913 127 6 3 2628 2752 176634119 176633994 1.240000e-41 182
15 TraesCS4A01G216900 chr3D 96.330 109 4 0 2642 2750 571704747 571704855 4.470000e-41 180
16 TraesCS4A01G216900 chr7B 92.683 123 7 1 2643 2763 718871771 718871649 5.790000e-40 176
17 TraesCS4A01G216900 chr3A 85.586 111 13 3 84 192 465534601 465534710 4.600000e-21 113


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G216900 chr4A 515778130 515783750 5620 True 10381.000000 10381 100.000000 1 5621 1 chr4A.!!$R1 5620
1 TraesCS4A01G216900 chr4D 67113477 67118930 5453 True 2071.666667 3133 86.854333 208 5616 3 chr4D.!!$R1 5408
2 TraesCS4A01G216900 chr4B 98694859 98700192 5333 True 1475.750000 2658 88.329500 208 5433 4 chr4B.!!$R1 5225

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
843 865 0.104855 CGATCGATCACCACCACCAT 59.895 55.0 24.40 0.0 0.00 3.55 F
1156 1201 0.028505 TACGTACGCAAGGAGATCGC 59.971 55.0 16.72 0.0 46.39 4.58 F
2112 2460 0.100682 TCATGCTCGACCTCGCTAAC 59.899 55.0 0.00 0.0 39.60 2.34 F
3176 3574 0.179116 CTCACCGCACCTGAGATGAG 60.179 60.0 0.00 0.0 37.90 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2406 2755 0.036858 GGTTGTGCACCTCCTCTCTC 60.037 60.0 15.69 0.0 43.29 3.20 R
2751 3114 0.242825 CACTACGCCGGAGAAGACAA 59.757 55.0 13.83 0.0 0.00 3.18 R
3242 3641 0.179150 CTGTAGCGACACAGGCTCTC 60.179 60.0 8.53 0.0 41.88 3.20 R
5128 5570 0.042431 ACTGAGGAGTGAGGGATGCT 59.958 55.0 0.00 0.0 0.00 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 8.779354 TGTTTGTATTTAACCTTTTTGCTTGT 57.221 26.923 0.00 0.00 0.00 3.16
34 35 8.660373 TGTTTGTATTTAACCTTTTTGCTTGTG 58.340 29.630 0.00 0.00 0.00 3.33
35 36 8.661257 GTTTGTATTTAACCTTTTTGCTTGTGT 58.339 29.630 0.00 0.00 0.00 3.72
36 37 8.779354 TTGTATTTAACCTTTTTGCTTGTGTT 57.221 26.923 0.00 0.00 0.00 3.32
37 38 8.779354 TGTATTTAACCTTTTTGCTTGTGTTT 57.221 26.923 0.00 0.00 0.00 2.83
38 39 8.660373 TGTATTTAACCTTTTTGCTTGTGTTTG 58.340 29.630 0.00 0.00 0.00 2.93
39 40 7.913674 ATTTAACCTTTTTGCTTGTGTTTGA 57.086 28.000 0.00 0.00 0.00 2.69
40 41 7.730364 TTTAACCTTTTTGCTTGTGTTTGAA 57.270 28.000 0.00 0.00 0.00 2.69
41 42 5.861222 AACCTTTTTGCTTGTGTTTGAAG 57.139 34.783 0.00 0.00 0.00 3.02
42 43 3.684305 ACCTTTTTGCTTGTGTTTGAAGC 59.316 39.130 0.00 0.00 45.12 3.86
45 46 4.707988 GCTTGTGTTTGAAGCGCA 57.292 50.000 11.47 0.00 36.74 6.09
46 47 2.207177 GCTTGTGTTTGAAGCGCAC 58.793 52.632 11.47 3.52 36.74 5.34
47 48 0.525242 GCTTGTGTTTGAAGCGCACA 60.525 50.000 11.47 6.70 40.79 4.57
48 49 1.865248 GCTTGTGTTTGAAGCGCACAT 60.865 47.619 11.47 0.00 41.86 3.21
49 50 2.604373 GCTTGTGTTTGAAGCGCACATA 60.604 45.455 11.47 0.00 41.86 2.29
50 51 3.825308 CTTGTGTTTGAAGCGCACATAT 58.175 40.909 11.47 0.00 41.86 1.78
51 52 3.913548 TGTGTTTGAAGCGCACATATT 57.086 38.095 11.47 0.00 38.09 1.28
52 53 3.563508 TGTGTTTGAAGCGCACATATTG 58.436 40.909 11.47 0.00 38.09 1.90
53 54 3.004210 TGTGTTTGAAGCGCACATATTGT 59.996 39.130 11.47 0.00 38.09 2.71
54 55 3.980775 GTGTTTGAAGCGCACATATTGTT 59.019 39.130 11.47 0.00 33.70 2.83
55 56 4.444056 GTGTTTGAAGCGCACATATTGTTT 59.556 37.500 11.47 0.00 33.70 2.83
56 57 4.443725 TGTTTGAAGCGCACATATTGTTTG 59.556 37.500 11.47 0.00 0.00 2.93
57 58 3.913548 TGAAGCGCACATATTGTTTGT 57.086 38.095 11.47 0.00 0.00 2.83
58 59 3.563508 TGAAGCGCACATATTGTTTGTG 58.436 40.909 11.47 0.00 45.74 3.33
65 66 4.668576 CACATATTGTTTGTGCGAGAGT 57.331 40.909 0.00 0.00 38.18 3.24
66 67 4.641954 CACATATTGTTTGTGCGAGAGTC 58.358 43.478 0.00 0.00 38.18 3.36
67 68 3.367932 ACATATTGTTTGTGCGAGAGTCG 59.632 43.478 0.00 0.00 43.89 4.18
68 69 1.148310 ATTGTTTGTGCGAGAGTCGG 58.852 50.000 0.00 0.00 40.84 4.79
69 70 0.878523 TTGTTTGTGCGAGAGTCGGG 60.879 55.000 0.00 0.00 40.84 5.14
70 71 2.357034 TTTGTGCGAGAGTCGGGC 60.357 61.111 0.00 1.97 40.84 6.13
71 72 4.717629 TTGTGCGAGAGTCGGGCG 62.718 66.667 0.00 2.12 40.84 6.13
80 81 4.760047 AGTCGGGCGCGCTGAATT 62.760 61.111 32.29 16.82 0.00 2.17
81 82 3.799755 GTCGGGCGCGCTGAATTT 61.800 61.111 32.29 0.00 0.00 1.82
82 83 3.798650 TCGGGCGCGCTGAATTTG 61.799 61.111 32.29 12.64 0.00 2.32
83 84 4.101790 CGGGCGCGCTGAATTTGT 62.102 61.111 32.29 0.00 0.00 2.83
84 85 2.504681 GGGCGCGCTGAATTTGTG 60.505 61.111 32.29 0.00 0.00 3.33
85 86 2.255252 GGCGCGCTGAATTTGTGT 59.745 55.556 32.29 0.00 0.00 3.72
86 87 1.499949 GGCGCGCTGAATTTGTGTA 59.500 52.632 32.29 0.00 0.00 2.90
87 88 0.793104 GGCGCGCTGAATTTGTGTAC 60.793 55.000 32.29 5.07 0.00 2.90
88 89 1.120147 GCGCGCTGAATTTGTGTACG 61.120 55.000 26.67 0.00 0.00 3.67
89 90 1.120147 CGCGCTGAATTTGTGTACGC 61.120 55.000 5.56 0.00 41.32 4.42
90 91 0.165944 GCGCTGAATTTGTGTACGCT 59.834 50.000 8.10 0.00 41.50 5.07
91 92 1.869503 CGCTGAATTTGTGTACGCTG 58.130 50.000 8.10 0.00 0.00 5.18
92 93 1.606606 GCTGAATTTGTGTACGCTGC 58.393 50.000 8.10 0.00 0.00 5.25
93 94 1.197721 GCTGAATTTGTGTACGCTGCT 59.802 47.619 8.10 0.00 0.00 4.24
94 95 2.843077 CTGAATTTGTGTACGCTGCTG 58.157 47.619 8.10 0.00 0.00 4.41
95 96 1.535028 TGAATTTGTGTACGCTGCTGG 59.465 47.619 8.10 0.00 0.00 4.85
96 97 1.804151 GAATTTGTGTACGCTGCTGGA 59.196 47.619 8.10 0.00 0.00 3.86
97 98 1.442769 ATTTGTGTACGCTGCTGGAG 58.557 50.000 8.10 0.00 0.00 3.86
98 99 1.227999 TTTGTGTACGCTGCTGGAGC 61.228 55.000 11.48 11.48 45.20 4.70
99 100 2.815647 GTGTACGCTGCTGGAGCC 60.816 66.667 15.74 2.29 46.01 4.70
100 101 3.310307 TGTACGCTGCTGGAGCCA 61.310 61.111 15.74 5.06 46.01 4.75
101 102 2.510238 GTACGCTGCTGGAGCCAG 60.510 66.667 15.74 12.17 46.01 4.85
121 122 2.740826 CGGTCCGCCACGTCAAAT 60.741 61.111 0.00 0.00 34.09 2.32
122 123 2.736682 CGGTCCGCCACGTCAAATC 61.737 63.158 0.00 0.00 34.09 2.17
123 124 1.669760 GGTCCGCCACGTCAAATCA 60.670 57.895 0.00 0.00 34.09 2.57
124 125 1.635663 GGTCCGCCACGTCAAATCAG 61.636 60.000 0.00 0.00 34.09 2.90
125 126 0.669318 GTCCGCCACGTCAAATCAGA 60.669 55.000 0.00 0.00 0.00 3.27
126 127 0.669318 TCCGCCACGTCAAATCAGAC 60.669 55.000 0.00 0.00 35.19 3.51
136 137 3.978759 GTCAAATCAGACGATGAACACG 58.021 45.455 0.00 0.00 42.53 4.49
137 138 2.411748 TCAAATCAGACGATGAACACGC 59.588 45.455 0.00 0.00 42.53 5.34
138 139 0.992072 AATCAGACGATGAACACGCG 59.008 50.000 3.53 3.53 42.53 6.01
139 140 0.802222 ATCAGACGATGAACACGCGG 60.802 55.000 12.47 1.27 42.53 6.46
140 141 2.809601 AGACGATGAACACGCGGC 60.810 61.111 12.47 0.00 0.00 6.53
141 142 3.109547 GACGATGAACACGCGGCA 61.110 61.111 12.47 3.04 32.27 5.69
142 143 2.663478 GACGATGAACACGCGGCAA 61.663 57.895 12.47 0.00 32.27 4.52
143 144 2.165362 GACGATGAACACGCGGCAAA 62.165 55.000 12.47 0.00 32.27 3.68
144 145 1.509787 CGATGAACACGCGGCAAAG 60.510 57.895 12.47 0.00 0.00 2.77
145 146 1.574428 GATGAACACGCGGCAAAGT 59.426 52.632 12.47 0.00 0.00 2.66
146 147 0.793861 GATGAACACGCGGCAAAGTA 59.206 50.000 12.47 0.00 0.00 2.24
147 148 0.796312 ATGAACACGCGGCAAAGTAG 59.204 50.000 12.47 0.00 0.00 2.57
148 149 0.531090 TGAACACGCGGCAAAGTAGT 60.531 50.000 12.47 0.00 0.00 2.73
149 150 0.584876 GAACACGCGGCAAAGTAGTT 59.415 50.000 12.47 1.63 0.00 2.24
150 151 1.003223 GAACACGCGGCAAAGTAGTTT 60.003 47.619 12.47 0.00 0.00 2.66
151 152 1.018910 ACACGCGGCAAAGTAGTTTT 58.981 45.000 12.47 0.00 0.00 2.43
152 153 1.402613 ACACGCGGCAAAGTAGTTTTT 59.597 42.857 12.47 0.00 0.00 1.94
153 154 2.613133 ACACGCGGCAAAGTAGTTTTTA 59.387 40.909 12.47 0.00 0.00 1.52
154 155 3.223157 CACGCGGCAAAGTAGTTTTTAG 58.777 45.455 12.47 0.00 0.00 1.85
155 156 2.239201 CGCGGCAAAGTAGTTTTTAGC 58.761 47.619 0.00 0.00 0.00 3.09
156 157 2.239201 GCGGCAAAGTAGTTTTTAGCG 58.761 47.619 0.00 0.00 0.00 4.26
157 158 2.350102 GCGGCAAAGTAGTTTTTAGCGT 60.350 45.455 0.00 0.00 0.00 5.07
158 159 3.223157 CGGCAAAGTAGTTTTTAGCGTG 58.777 45.455 0.00 0.00 0.00 5.34
159 160 2.977829 GGCAAAGTAGTTTTTAGCGTGC 59.022 45.455 0.00 0.00 0.00 5.34
160 161 2.977829 GCAAAGTAGTTTTTAGCGTGCC 59.022 45.455 0.00 0.00 0.00 5.01
161 162 3.223157 CAAAGTAGTTTTTAGCGTGCCG 58.777 45.455 0.00 0.00 0.00 5.69
177 178 4.688419 CGCGTTGGGCTGCTGTTG 62.688 66.667 0.00 0.00 40.44 3.33
178 179 3.286751 GCGTTGGGCTGCTGTTGA 61.287 61.111 0.00 0.00 39.11 3.18
179 180 2.844451 GCGTTGGGCTGCTGTTGAA 61.844 57.895 0.00 0.00 39.11 2.69
180 181 1.283793 CGTTGGGCTGCTGTTGAAG 59.716 57.895 0.00 0.00 0.00 3.02
181 182 1.165907 CGTTGGGCTGCTGTTGAAGA 61.166 55.000 0.00 0.00 0.00 2.87
182 183 1.251251 GTTGGGCTGCTGTTGAAGAT 58.749 50.000 0.00 0.00 0.00 2.40
183 184 1.068055 GTTGGGCTGCTGTTGAAGATG 60.068 52.381 0.00 0.00 0.00 2.90
184 185 1.246056 TGGGCTGCTGTTGAAGATGC 61.246 55.000 0.00 0.00 0.00 3.91
185 186 0.964358 GGGCTGCTGTTGAAGATGCT 60.964 55.000 0.00 0.00 0.00 3.79
186 187 0.450983 GGCTGCTGTTGAAGATGCTC 59.549 55.000 0.00 0.00 0.00 4.26
187 188 1.451067 GCTGCTGTTGAAGATGCTCT 58.549 50.000 0.00 0.00 0.00 4.09
188 189 1.811359 GCTGCTGTTGAAGATGCTCTT 59.189 47.619 0.00 0.00 39.87 2.85
189 190 3.005554 GCTGCTGTTGAAGATGCTCTTA 58.994 45.455 0.00 0.00 36.73 2.10
190 191 3.626670 GCTGCTGTTGAAGATGCTCTTAT 59.373 43.478 0.00 0.00 36.73 1.73
191 192 4.813161 GCTGCTGTTGAAGATGCTCTTATA 59.187 41.667 0.00 0.00 36.73 0.98
192 193 5.295292 GCTGCTGTTGAAGATGCTCTTATAA 59.705 40.000 0.00 0.00 36.73 0.98
193 194 6.183360 GCTGCTGTTGAAGATGCTCTTATAAA 60.183 38.462 0.00 0.00 36.73 1.40
194 195 7.627088 GCTGCTGTTGAAGATGCTCTTATAAAA 60.627 37.037 0.00 0.00 36.73 1.52
195 196 7.530010 TGCTGTTGAAGATGCTCTTATAAAAC 58.470 34.615 0.00 3.78 36.73 2.43
196 197 7.391554 TGCTGTTGAAGATGCTCTTATAAAACT 59.608 33.333 0.00 0.00 36.73 2.66
197 198 8.883731 GCTGTTGAAGATGCTCTTATAAAACTA 58.116 33.333 0.00 0.00 36.73 2.24
202 203 8.879759 TGAAGATGCTCTTATAAAACTAAACGG 58.120 33.333 0.00 0.00 36.73 4.44
203 204 9.095065 GAAGATGCTCTTATAAAACTAAACGGA 57.905 33.333 0.00 0.00 36.73 4.69
204 205 8.649973 AGATGCTCTTATAAAACTAAACGGAG 57.350 34.615 0.00 0.00 0.00 4.63
205 206 7.711339 AGATGCTCTTATAAAACTAAACGGAGG 59.289 37.037 0.00 0.00 0.00 4.30
206 207 6.110707 TGCTCTTATAAAACTAAACGGAGGG 58.889 40.000 0.00 0.00 0.00 4.30
236 237 5.841957 AACATTGCATTTTCTAGGCCTAG 57.158 39.130 30.94 30.94 34.56 3.02
237 238 4.210331 ACATTGCATTTTCTAGGCCTAGG 58.790 43.478 34.43 21.20 34.06 3.02
248 249 1.153249 GGCCTAGGTGCGCACAATA 60.153 57.895 38.60 28.24 0.00 1.90
268 270 7.786114 ACAATATTTTGTGAAAAATCACGCTG 58.214 30.769 0.33 0.00 44.36 5.18
274 276 2.095718 GTGAAAAATCACGCTGGAGGAC 60.096 50.000 0.00 0.00 0.00 3.85
290 292 4.057428 ACGTCCAGCGGCTCAGTC 62.057 66.667 0.00 0.00 46.52 3.51
338 340 9.318041 CAAGTCAATAGTCACTTTGTAAAATCG 57.682 33.333 0.00 0.00 30.06 3.34
392 394 1.000019 CACAGTAGGAGGTCCGGGA 60.000 63.158 0.00 0.00 42.08 5.14
393 395 0.397254 CACAGTAGGAGGTCCGGGAT 60.397 60.000 0.00 0.00 42.08 3.85
394 396 0.106116 ACAGTAGGAGGTCCGGGATC 60.106 60.000 0.00 0.00 42.08 3.36
513 535 1.825474 TCTTCCTCCTCGCTTCGATTT 59.175 47.619 0.00 0.00 34.61 2.17
522 544 1.713830 GCTTCGATTTCCCGAACCG 59.286 57.895 0.00 0.00 42.74 4.44
525 547 2.277084 CTTCGATTTCCCGAACCGAAT 58.723 47.619 11.71 0.00 42.74 3.34
530 552 3.120130 CGATTTCCCGAACCGAATCAAAA 60.120 43.478 0.00 0.00 0.00 2.44
568 590 1.140804 GCTCGCTCACCTCTCTTCC 59.859 63.158 0.00 0.00 0.00 3.46
585 607 4.778143 CCTTCCCTTCCACGGCGG 62.778 72.222 13.24 0.00 0.00 6.13
620 642 2.030412 CAACCAAAAAGGCGGGGC 59.970 61.111 0.00 0.00 43.14 5.80
621 643 3.611674 AACCAAAAAGGCGGGGCG 61.612 61.111 0.00 0.00 43.14 6.13
767 789 3.520862 GTCCATGTGCCATGGCCG 61.521 66.667 33.44 18.46 41.09 6.13
768 790 3.726144 TCCATGTGCCATGGCCGA 61.726 61.111 33.44 20.19 41.09 5.54
792 814 4.104831 CCCTCCTTTATATACCCCTCCAG 58.895 52.174 0.00 0.00 0.00 3.86
802 824 3.721706 CCCTCCAGCCTCCCACAC 61.722 72.222 0.00 0.00 0.00 3.82
839 861 0.396001 TACCCGATCGATCACCACCA 60.396 55.000 24.40 2.13 0.00 4.17
843 865 0.104855 CGATCGATCACCACCACCAT 59.895 55.000 24.40 0.00 0.00 3.55
845 867 0.469917 ATCGATCACCACCACCATCC 59.530 55.000 0.00 0.00 0.00 3.51
846 868 1.153168 CGATCACCACCACCATCCC 60.153 63.158 0.00 0.00 0.00 3.85
847 869 1.153168 GATCACCACCACCATCCCG 60.153 63.158 0.00 0.00 0.00 5.14
848 870 3.344137 ATCACCACCACCATCCCGC 62.344 63.158 0.00 0.00 0.00 6.13
890 921 2.597510 GCCAACCACCACCACTCC 60.598 66.667 0.00 0.00 0.00 3.85
910 941 4.517703 CTCGTCTCGCCGTCGGAC 62.518 72.222 17.49 5.49 36.13 4.79
918 949 2.342648 GCCGTCGGACTTCCACTT 59.657 61.111 17.49 0.00 35.14 3.16
921 952 2.372690 CGTCGGACTTCCACTTGCG 61.373 63.158 6.57 0.00 35.14 4.85
953 995 3.733960 TCGTCTCCGCTGGTCGTG 61.734 66.667 0.00 0.00 36.19 4.35
966 1008 2.126618 TCGTGTCGATCGTGTGGC 60.127 61.111 15.94 2.60 0.00 5.01
984 1026 2.333106 GCGTCGAGCGAAATTAAGTC 57.667 50.000 10.82 0.00 44.77 3.01
1102 1147 1.004044 CCAAGATGGACTGCTTCCTGT 59.996 52.381 6.51 0.00 46.10 4.00
1140 1185 2.541178 GCTGAATCTCCAGGTACGTACG 60.541 54.545 18.98 15.01 34.82 3.67
1141 1186 2.681848 CTGAATCTCCAGGTACGTACGT 59.318 50.000 25.98 25.98 0.00 3.57
1142 1187 3.872696 TGAATCTCCAGGTACGTACGTA 58.127 45.455 23.60 23.60 0.00 3.57
1153 1198 3.911989 CGTACGTACGCAAGGAGAT 57.088 52.632 32.36 0.00 43.14 2.75
1154 1199 1.739618 CGTACGTACGCAAGGAGATC 58.260 55.000 32.36 0.00 43.14 2.75
1155 1200 1.739618 GTACGTACGCAAGGAGATCG 58.260 55.000 16.72 0.00 46.39 3.69
1156 1201 0.028505 TACGTACGCAAGGAGATCGC 59.971 55.000 16.72 0.00 46.39 4.58
1157 1202 1.064296 CGTACGCAAGGAGATCGCT 59.936 57.895 0.52 0.00 46.39 4.93
1158 1203 0.306840 CGTACGCAAGGAGATCGCTA 59.693 55.000 0.52 0.00 46.39 4.26
1159 1204 1.756367 GTACGCAAGGAGATCGCTAC 58.244 55.000 0.00 0.00 46.39 3.58
1165 1210 1.863454 CAAGGAGATCGCTACATGCAC 59.137 52.381 0.00 0.00 43.06 4.57
1176 1221 1.726533 TACATGCACGGCCGATCGTA 61.727 55.000 35.90 20.85 41.86 3.43
1230 1284 3.853831 TGAGTCGCCGACTTGTTTATA 57.146 42.857 22.17 0.00 43.53 0.98
1500 1556 2.818132 CTCCTGTCCATCCTCGGC 59.182 66.667 0.00 0.00 0.00 5.54
1989 2337 1.803519 CTTCGACTCCGTGCTGCTC 60.804 63.158 0.00 0.00 37.05 4.26
2085 2433 2.671963 GGCTTCCACGTCAACCCC 60.672 66.667 0.00 0.00 0.00 4.95
2112 2460 0.100682 TCATGCTCGACCTCGCTAAC 59.899 55.000 0.00 0.00 39.60 2.34
2123 2471 2.915738 CTCGCTAACGGTGAGTACTT 57.084 50.000 0.00 0.00 44.85 2.24
2126 2474 3.073678 TCGCTAACGGTGAGTACTTACA 58.926 45.455 18.44 0.01 40.63 2.41
2152 2500 3.343941 AATTAACTGCCGCTTCTACCA 57.656 42.857 0.00 0.00 0.00 3.25
2153 2501 3.560636 ATTAACTGCCGCTTCTACCAT 57.439 42.857 0.00 0.00 0.00 3.55
2154 2502 3.343941 TTAACTGCCGCTTCTACCATT 57.656 42.857 0.00 0.00 0.00 3.16
2155 2503 4.475051 TTAACTGCCGCTTCTACCATTA 57.525 40.909 0.00 0.00 0.00 1.90
2156 2504 2.604046 ACTGCCGCTTCTACCATTAG 57.396 50.000 0.00 0.00 0.00 1.73
2157 2505 1.221414 CTGCCGCTTCTACCATTAGC 58.779 55.000 0.00 0.00 0.00 3.09
2158 2506 0.539518 TGCCGCTTCTACCATTAGCA 59.460 50.000 0.00 0.00 34.62 3.49
2159 2507 1.065782 TGCCGCTTCTACCATTAGCAA 60.066 47.619 0.00 0.00 34.62 3.91
2160 2508 1.330829 GCCGCTTCTACCATTAGCAAC 59.669 52.381 0.00 0.00 34.62 4.17
2161 2509 2.906354 CCGCTTCTACCATTAGCAACT 58.094 47.619 0.00 0.00 34.62 3.16
2162 2510 3.270877 CCGCTTCTACCATTAGCAACTT 58.729 45.455 0.00 0.00 34.62 2.66
2163 2511 3.063997 CCGCTTCTACCATTAGCAACTTG 59.936 47.826 0.00 0.00 34.62 3.16
2235 2583 4.563184 CACCGAAGCACTAGACAATCTAAC 59.437 45.833 0.00 0.00 0.00 2.34
2236 2584 4.113354 CCGAAGCACTAGACAATCTAACC 58.887 47.826 0.00 0.00 0.00 2.85
2276 2625 0.880718 GGCAGCAGGAATAGTACCGC 60.881 60.000 0.00 0.00 0.00 5.68
2312 2661 1.153249 CCCCTTTTAGCATCGCGGA 60.153 57.895 6.13 0.00 0.00 5.54
2344 2693 8.680903 AGATTTTTGGATTAGTGATGATGACAC 58.319 33.333 0.00 0.00 38.38 3.67
2353 2702 1.478105 TGATGATGACACTGGAGACGG 59.522 52.381 0.00 0.00 44.60 4.79
2369 2718 1.080161 CGGGCAAAACAAATCCGGG 60.080 57.895 0.00 0.00 37.35 5.73
2459 2812 2.752903 GAGAGTGCCCTAGATAGCTAGC 59.247 54.545 6.62 6.62 42.29 3.42
2460 2813 2.378547 AGAGTGCCCTAGATAGCTAGCT 59.621 50.000 23.12 23.12 42.29 3.32
2461 2814 3.589735 AGAGTGCCCTAGATAGCTAGCTA 59.410 47.826 26.09 26.09 42.29 3.32
2462 2815 3.945285 GAGTGCCCTAGATAGCTAGCTAG 59.055 52.174 30.70 30.70 42.29 3.42
2463 2816 3.332485 AGTGCCCTAGATAGCTAGCTAGT 59.668 47.826 33.14 18.69 42.29 2.57
2464 2817 4.536888 AGTGCCCTAGATAGCTAGCTAGTA 59.463 45.833 33.14 21.31 42.29 1.82
2466 2819 4.536888 TGCCCTAGATAGCTAGCTAGTACT 59.463 45.833 33.14 24.72 42.29 2.73
2467 2820 5.121105 GCCCTAGATAGCTAGCTAGTACTC 58.879 50.000 33.14 19.85 42.29 2.59
2468 2821 5.677567 CCCTAGATAGCTAGCTAGTACTCC 58.322 50.000 33.14 12.86 42.29 3.85
2469 2822 5.427481 CCCTAGATAGCTAGCTAGTACTCCT 59.573 48.000 33.14 18.01 42.29 3.69
2470 2823 6.612456 CCCTAGATAGCTAGCTAGTACTCCTA 59.388 46.154 33.14 18.13 42.29 2.94
2535 2897 1.079127 GACACATGTCACGGAGGGG 60.079 63.158 7.15 0.00 44.18 4.79
2596 2959 6.602009 TCATAATACTGGACCGATGTCGATAT 59.398 38.462 3.62 0.00 42.73 1.63
2599 2962 4.017177 ACTGGACCGATGTCGATATCTA 57.983 45.455 18.46 0.00 42.73 1.98
2600 2963 3.752222 ACTGGACCGATGTCGATATCTAC 59.248 47.826 18.46 10.01 42.73 2.59
2601 2964 3.746940 TGGACCGATGTCGATATCTACA 58.253 45.455 18.46 12.03 42.73 2.74
2602 2965 4.332828 TGGACCGATGTCGATATCTACAT 58.667 43.478 19.69 19.69 42.73 2.29
2605 2968 3.695060 ACCGATGTCGATATCTACATCCC 59.305 47.826 30.13 16.74 45.99 3.85
2607 2970 3.948473 CGATGTCGATATCTACATCCCCT 59.052 47.826 30.13 11.03 45.99 4.79
2609 2972 3.344515 TGTCGATATCTACATCCCCTCG 58.655 50.000 6.00 0.00 0.00 4.63
2610 2973 2.097791 GTCGATATCTACATCCCCTCGC 59.902 54.545 2.62 0.00 0.00 5.03
2611 2974 1.405821 CGATATCTACATCCCCTCGCC 59.594 57.143 0.34 0.00 0.00 5.54
2613 2976 0.611062 TATCTACATCCCCTCGCCCG 60.611 60.000 0.00 0.00 0.00 6.13
2614 2977 4.301027 CTACATCCCCTCGCCCGC 62.301 72.222 0.00 0.00 0.00 6.13
2615 2978 4.853142 TACATCCCCTCGCCCGCT 62.853 66.667 0.00 0.00 0.00 5.52
2632 2995 1.373497 CTCCACAGTCCAGTGCGTC 60.373 63.158 0.00 0.00 38.18 5.19
2635 2998 2.524394 ACAGTCCAGTGCGTCCCT 60.524 61.111 0.00 0.00 0.00 4.20
2647 3010 1.134159 TGCGTCCCTCCTACTCTACTC 60.134 57.143 0.00 0.00 0.00 2.59
2648 3011 1.815021 GCGTCCCTCCTACTCTACTCC 60.815 61.905 0.00 0.00 0.00 3.85
2649 3012 1.202794 CGTCCCTCCTACTCTACTCCC 60.203 61.905 0.00 0.00 0.00 4.30
2650 3013 2.137702 GTCCCTCCTACTCTACTCCCT 58.862 57.143 0.00 0.00 0.00 4.20
2651 3014 2.107031 GTCCCTCCTACTCTACTCCCTC 59.893 59.091 0.00 0.00 0.00 4.30
2652 3015 1.426215 CCCTCCTACTCTACTCCCTCC 59.574 61.905 0.00 0.00 0.00 4.30
2653 3016 1.072648 CCTCCTACTCTACTCCCTCCG 59.927 61.905 0.00 0.00 0.00 4.63
2654 3017 1.770061 CTCCTACTCTACTCCCTCCGT 59.230 57.143 0.00 0.00 0.00 4.69
2655 3018 2.173143 CTCCTACTCTACTCCCTCCGTT 59.827 54.545 0.00 0.00 0.00 4.44
2656 3019 2.579860 TCCTACTCTACTCCCTCCGTTT 59.420 50.000 0.00 0.00 0.00 3.60
2657 3020 2.950975 CCTACTCTACTCCCTCCGTTTC 59.049 54.545 0.00 0.00 0.00 2.78
2658 3021 1.461559 ACTCTACTCCCTCCGTTTCG 58.538 55.000 0.00 0.00 0.00 3.46
2659 3022 1.004044 ACTCTACTCCCTCCGTTTCGA 59.996 52.381 0.00 0.00 0.00 3.71
2660 3023 2.089980 CTCTACTCCCTCCGTTTCGAA 58.910 52.381 0.00 0.00 0.00 3.71
2661 3024 2.688958 CTCTACTCCCTCCGTTTCGAAT 59.311 50.000 0.00 0.00 0.00 3.34
2662 3025 3.094572 TCTACTCCCTCCGTTTCGAATT 58.905 45.455 0.00 0.00 0.00 2.17
2663 3026 4.272489 TCTACTCCCTCCGTTTCGAATTA 58.728 43.478 0.00 0.00 0.00 1.40
2664 3027 3.242549 ACTCCCTCCGTTTCGAATTAC 57.757 47.619 0.00 0.00 0.00 1.89
2665 3028 2.830321 ACTCCCTCCGTTTCGAATTACT 59.170 45.455 0.00 0.00 0.00 2.24
2666 3029 3.260128 ACTCCCTCCGTTTCGAATTACTT 59.740 43.478 0.00 0.00 0.00 2.24
2667 3030 3.592059 TCCCTCCGTTTCGAATTACTTG 58.408 45.455 0.00 0.00 0.00 3.16
2668 3031 3.007182 TCCCTCCGTTTCGAATTACTTGT 59.993 43.478 0.00 0.00 0.00 3.16
2669 3032 3.370061 CCCTCCGTTTCGAATTACTTGTC 59.630 47.826 0.00 0.00 0.00 3.18
2670 3033 3.060363 CCTCCGTTTCGAATTACTTGTCG 59.940 47.826 0.00 0.00 38.62 4.35
2671 3034 2.409378 TCCGTTTCGAATTACTTGTCGC 59.591 45.455 0.00 0.00 37.19 5.19
2672 3035 2.156117 CCGTTTCGAATTACTTGTCGCA 59.844 45.455 0.00 0.00 37.19 5.10
2673 3036 3.363182 CCGTTTCGAATTACTTGTCGCAA 60.363 43.478 0.00 0.00 37.19 4.85
2674 3037 3.833061 CGTTTCGAATTACTTGTCGCAAG 59.167 43.478 15.16 15.16 37.19 4.01
2675 3038 4.607557 CGTTTCGAATTACTTGTCGCAAGT 60.608 41.667 22.53 22.53 37.19 3.16
2676 3039 5.387649 CGTTTCGAATTACTTGTCGCAAGTA 60.388 40.000 20.95 20.95 37.19 2.24
2677 3040 6.531439 GTTTCGAATTACTTGTCGCAAGTAT 58.469 36.000 23.59 14.96 37.19 2.12
2678 3041 5.696260 TCGAATTACTTGTCGCAAGTATG 57.304 39.130 23.59 16.74 37.19 2.39
2679 3042 4.565166 TCGAATTACTTGTCGCAAGTATGG 59.435 41.667 23.59 15.40 37.19 2.74
2680 3043 4.565166 CGAATTACTTGTCGCAAGTATGGA 59.435 41.667 23.59 14.66 33.27 3.41
2681 3044 5.234329 CGAATTACTTGTCGCAAGTATGGAT 59.766 40.000 23.59 15.77 33.27 3.41
2682 3045 5.991328 ATTACTTGTCGCAAGTATGGATG 57.009 39.130 23.59 2.90 33.27 3.51
2683 3046 3.334583 ACTTGTCGCAAGTATGGATGT 57.665 42.857 19.21 0.00 39.48 3.06
2684 3047 4.465632 ACTTGTCGCAAGTATGGATGTA 57.534 40.909 19.21 0.00 39.48 2.29
2685 3048 5.023533 ACTTGTCGCAAGTATGGATGTAT 57.976 39.130 19.21 0.00 39.48 2.29
2686 3049 5.050490 ACTTGTCGCAAGTATGGATGTATC 58.950 41.667 19.21 0.00 39.48 2.24
2687 3050 4.937201 TGTCGCAAGTATGGATGTATCT 57.063 40.909 0.00 0.00 39.48 1.98
2688 3051 6.040504 ACTTGTCGCAAGTATGGATGTATCTA 59.959 38.462 19.21 0.00 39.48 1.98
2689 3052 6.013842 TGTCGCAAGTATGGATGTATCTAG 57.986 41.667 0.00 0.00 39.48 2.43
2690 3053 5.768164 TGTCGCAAGTATGGATGTATCTAGA 59.232 40.000 0.00 0.00 39.48 2.43
2691 3054 6.434340 TGTCGCAAGTATGGATGTATCTAGAT 59.566 38.462 10.73 10.73 39.48 1.98
2692 3055 6.749578 GTCGCAAGTATGGATGTATCTAGATG 59.250 42.308 15.79 0.00 39.48 2.90
2693 3056 6.434340 TCGCAAGTATGGATGTATCTAGATGT 59.566 38.462 15.79 1.25 39.48 3.06
2694 3057 7.610305 TCGCAAGTATGGATGTATCTAGATGTA 59.390 37.037 15.79 4.44 39.48 2.29
2695 3058 8.409371 CGCAAGTATGGATGTATCTAGATGTAT 58.591 37.037 15.79 9.11 0.00 2.29
2723 3086 9.961265 TTAGTTGTAGATACATCCATTTCTACG 57.039 33.333 0.00 0.00 42.13 3.51
2724 3087 8.234136 AGTTGTAGATACATCCATTTCTACGA 57.766 34.615 0.00 0.00 42.13 3.43
2725 3088 8.136165 AGTTGTAGATACATCCATTTCTACGAC 58.864 37.037 16.32 16.32 46.81 4.34
2726 3089 6.665465 TGTAGATACATCCATTTCTACGACG 58.335 40.000 0.00 0.00 42.13 5.12
2727 3090 6.484308 TGTAGATACATCCATTTCTACGACGA 59.516 38.462 0.00 0.00 42.13 4.20
2728 3091 6.003234 AGATACATCCATTTCTACGACGAG 57.997 41.667 0.00 0.00 0.00 4.18
2729 3092 5.531659 AGATACATCCATTTCTACGACGAGT 59.468 40.000 0.00 0.00 0.00 4.18
2730 3093 6.709397 AGATACATCCATTTCTACGACGAGTA 59.291 38.462 0.00 0.00 0.00 2.59
2731 3094 5.571784 ACATCCATTTCTACGACGAGTAA 57.428 39.130 0.00 0.00 34.45 2.24
2732 3095 6.145338 ACATCCATTTCTACGACGAGTAAT 57.855 37.500 0.00 0.00 34.45 1.89
2733 3096 6.570692 ACATCCATTTCTACGACGAGTAATT 58.429 36.000 0.00 0.00 34.45 1.40
2734 3097 7.039882 ACATCCATTTCTACGACGAGTAATTT 58.960 34.615 0.00 0.00 34.45 1.82
2735 3098 6.880822 TCCATTTCTACGACGAGTAATTTG 57.119 37.500 0.00 0.00 34.45 2.32
2736 3099 5.808540 TCCATTTCTACGACGAGTAATTTGG 59.191 40.000 0.00 0.59 34.45 3.28
2737 3100 5.808540 CCATTTCTACGACGAGTAATTTGGA 59.191 40.000 0.00 0.00 34.45 3.53
2738 3101 6.311935 CCATTTCTACGACGAGTAATTTGGAA 59.688 38.462 0.00 0.00 34.45 3.53
2739 3102 7.011109 CCATTTCTACGACGAGTAATTTGGAAT 59.989 37.037 0.00 0.00 34.45 3.01
2740 3103 6.880822 TTCTACGACGAGTAATTTGGAATG 57.119 37.500 0.00 0.00 34.45 2.67
2741 3104 5.345702 TCTACGACGAGTAATTTGGAATGG 58.654 41.667 0.00 0.00 34.45 3.16
2742 3105 4.196626 ACGACGAGTAATTTGGAATGGA 57.803 40.909 0.00 0.00 0.00 3.41
2743 3106 4.181578 ACGACGAGTAATTTGGAATGGAG 58.818 43.478 0.00 0.00 0.00 3.86
2744 3107 3.555956 CGACGAGTAATTTGGAATGGAGG 59.444 47.826 0.00 0.00 0.00 4.30
2745 3108 3.877508 GACGAGTAATTTGGAATGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
2746 3109 3.521937 ACGAGTAATTTGGAATGGAGGGA 59.478 43.478 0.00 0.00 0.00 4.20
2747 3110 4.130118 CGAGTAATTTGGAATGGAGGGAG 58.870 47.826 0.00 0.00 0.00 4.30
2748 3111 4.384208 CGAGTAATTTGGAATGGAGGGAGT 60.384 45.833 0.00 0.00 0.00 3.85
2749 3112 5.163343 CGAGTAATTTGGAATGGAGGGAGTA 60.163 44.000 0.00 0.00 0.00 2.59
2750 3113 6.002653 AGTAATTTGGAATGGAGGGAGTAC 57.997 41.667 0.00 0.00 0.00 2.73
2751 3114 5.731678 AGTAATTTGGAATGGAGGGAGTACT 59.268 40.000 0.00 0.00 0.00 2.73
2752 3115 5.536497 AATTTGGAATGGAGGGAGTACTT 57.464 39.130 0.00 0.00 0.00 2.24
2753 3116 4.301072 TTTGGAATGGAGGGAGTACTTG 57.699 45.455 0.00 0.00 0.00 3.16
2754 3117 2.915869 TGGAATGGAGGGAGTACTTGT 58.084 47.619 0.00 0.00 0.00 3.16
2755 3118 2.838202 TGGAATGGAGGGAGTACTTGTC 59.162 50.000 0.00 0.00 0.00 3.18
2756 3119 3.108376 GGAATGGAGGGAGTACTTGTCT 58.892 50.000 0.00 0.00 0.00 3.41
2772 3135 0.456312 GTCTTCTCCGGCGTAGTGTG 60.456 60.000 6.01 0.00 0.00 3.82
2773 3136 1.153823 CTTCTCCGGCGTAGTGTGG 60.154 63.158 6.01 0.00 0.00 4.17
2803 3190 1.153449 TCTAATCAACCTGCCCGCG 60.153 57.895 0.00 0.00 0.00 6.46
2848 3235 3.992943 TTCACGGGTGATTTGACCTAT 57.007 42.857 1.83 0.00 39.64 2.57
2853 3240 1.408266 GGGTGATTTGACCTATGCCGT 60.408 52.381 0.00 0.00 36.14 5.68
2855 3242 2.097466 GGTGATTTGACCTATGCCGTTG 59.903 50.000 0.00 0.00 32.69 4.10
2856 3243 2.747446 GTGATTTGACCTATGCCGTTGT 59.253 45.455 0.00 0.00 0.00 3.32
2857 3244 3.006940 TGATTTGACCTATGCCGTTGTC 58.993 45.455 0.00 0.00 0.00 3.18
2860 3250 2.851263 TGACCTATGCCGTTGTCTTT 57.149 45.000 0.00 0.00 0.00 2.52
2894 3284 5.815740 TCCGAAGAAGATAAAGAAAATCCCG 59.184 40.000 0.00 0.00 0.00 5.14
2955 3353 4.271049 CCATCACGCTAACCTCACTTTATG 59.729 45.833 0.00 0.00 0.00 1.90
2959 3357 2.029244 CGCTAACCTCACTTTATGCACG 59.971 50.000 0.00 0.00 0.00 5.34
2962 3360 3.350219 AACCTCACTTTATGCACGGAT 57.650 42.857 0.00 0.00 0.00 4.18
2975 3373 1.377725 ACGGATTGGAGGCTTGCTG 60.378 57.895 0.00 0.00 0.00 4.41
2976 3374 1.078214 CGGATTGGAGGCTTGCTGA 60.078 57.895 0.00 0.00 0.00 4.26
2993 3391 2.468777 GCTGAAACTGCATGTGTTTTCG 59.531 45.455 16.11 12.34 37.70 3.46
3010 3408 2.798976 TCGGTGCTGTACGTACTTTT 57.201 45.000 25.12 0.00 0.00 2.27
3021 3419 6.400091 GCTGTACGTACTTTTCATCAGACAAG 60.400 42.308 25.12 10.68 37.52 3.16
3026 3424 6.706270 ACGTACTTTTCATCAGACAAGTGAAT 59.294 34.615 7.15 0.00 42.89 2.57
3027 3425 7.011773 CGTACTTTTCATCAGACAAGTGAATG 58.988 38.462 7.15 0.00 42.89 2.67
3030 3428 7.646314 ACTTTTCATCAGACAAGTGAATGAAG 58.354 34.615 0.00 0.00 41.79 3.02
3034 3432 7.991084 TCATCAGACAAGTGAATGAAGAAAT 57.009 32.000 0.00 0.00 0.00 2.17
3035 3433 7.813645 TCATCAGACAAGTGAATGAAGAAATG 58.186 34.615 0.00 0.00 0.00 2.32
3036 3434 7.662669 TCATCAGACAAGTGAATGAAGAAATGA 59.337 33.333 0.00 0.00 0.00 2.57
3037 3435 7.806409 TCAGACAAGTGAATGAAGAAATGAA 57.194 32.000 0.00 0.00 0.00 2.57
3038 3436 8.400184 TCAGACAAGTGAATGAAGAAATGAAT 57.600 30.769 0.00 0.00 0.00 2.57
3039 3437 9.506018 TCAGACAAGTGAATGAAGAAATGAATA 57.494 29.630 0.00 0.00 0.00 1.75
3040 3438 9.552114 CAGACAAGTGAATGAAGAAATGAATAC 57.448 33.333 0.00 0.00 0.00 1.89
3059 3457 7.105588 TGAATACTAGTTGACACGTAGGTAGA 58.894 38.462 0.00 0.00 0.00 2.59
3060 3458 7.772292 TGAATACTAGTTGACACGTAGGTAGAT 59.228 37.037 0.00 0.00 0.00 1.98
3061 3459 8.517062 AATACTAGTTGACACGTAGGTAGATT 57.483 34.615 0.00 0.00 0.00 2.40
3062 3460 9.618890 AATACTAGTTGACACGTAGGTAGATTA 57.381 33.333 0.00 0.00 0.00 1.75
3063 3461 7.551035 ACTAGTTGACACGTAGGTAGATTAG 57.449 40.000 0.00 0.00 0.00 1.73
3078 3476 0.666913 ATTAGATCCGTCCGACACCG 59.333 55.000 0.00 0.00 0.00 4.94
3104 3502 2.160417 CAGCTTTCAGTTGGATCCGTTC 59.840 50.000 7.39 0.00 0.00 3.95
3170 3568 3.625897 CCACCTCACCGCACCTGA 61.626 66.667 0.00 0.00 0.00 3.86
3171 3569 2.047844 CACCTCACCGCACCTGAG 60.048 66.667 0.00 0.00 35.78 3.35
3172 3570 2.203640 ACCTCACCGCACCTGAGA 60.204 61.111 4.26 0.00 37.90 3.27
3173 3571 1.610673 ACCTCACCGCACCTGAGAT 60.611 57.895 4.26 0.00 37.90 2.75
3174 3572 1.153489 CCTCACCGCACCTGAGATG 60.153 63.158 4.26 0.00 37.90 2.90
3175 3573 1.607801 CCTCACCGCACCTGAGATGA 61.608 60.000 4.26 0.00 37.90 2.92
3176 3574 0.179116 CTCACCGCACCTGAGATGAG 60.179 60.000 0.00 0.00 37.90 2.90
3189 3587 3.508426 TGAGATGAGGATGAGGATGAGG 58.492 50.000 0.00 0.00 0.00 3.86
3241 3640 1.535226 CCGTCGATATTGTTCCGAGCA 60.535 52.381 0.00 0.00 32.65 4.26
3242 3641 1.781429 CGTCGATATTGTTCCGAGCAG 59.219 52.381 0.00 0.00 32.65 4.24
3243 3642 2.540973 CGTCGATATTGTTCCGAGCAGA 60.541 50.000 0.00 0.00 32.65 4.26
3244 3643 3.046390 GTCGATATTGTTCCGAGCAGAG 58.954 50.000 0.00 0.00 32.65 3.35
3245 3644 2.949644 TCGATATTGTTCCGAGCAGAGA 59.050 45.455 0.00 0.00 0.00 3.10
3279 3680 1.002087 CAGTTGGAGATATACCGCCCC 59.998 57.143 0.00 0.00 0.00 5.80
3281 3682 1.189524 TTGGAGATATACCGCCCCCG 61.190 60.000 0.00 0.00 0.00 5.73
3282 3683 2.577593 GAGATATACCGCCCCCGC 59.422 66.667 0.00 0.00 0.00 6.13
3283 3684 1.982938 GAGATATACCGCCCCCGCT 60.983 63.158 0.00 0.00 0.00 5.52
3284 3685 1.535687 AGATATACCGCCCCCGCTT 60.536 57.895 0.00 0.00 0.00 4.68
3285 3686 1.125711 AGATATACCGCCCCCGCTTT 61.126 55.000 0.00 0.00 0.00 3.51
3286 3687 0.609662 GATATACCGCCCCCGCTTTA 59.390 55.000 0.00 0.00 0.00 1.85
3287 3688 1.002315 GATATACCGCCCCCGCTTTAA 59.998 52.381 0.00 0.00 0.00 1.52
3304 3705 6.049149 CGCTTTAATTAGACAGGAGGAATCA 58.951 40.000 0.00 0.00 0.00 2.57
3305 3706 6.708054 CGCTTTAATTAGACAGGAGGAATCAT 59.292 38.462 0.00 0.00 0.00 2.45
3306 3707 7.227512 CGCTTTAATTAGACAGGAGGAATCATT 59.772 37.037 0.00 0.00 0.00 2.57
3307 3708 8.563732 GCTTTAATTAGACAGGAGGAATCATTC 58.436 37.037 0.00 0.00 0.00 2.67
3308 3709 9.618890 CTTTAATTAGACAGGAGGAATCATTCA 57.381 33.333 0.00 0.00 0.00 2.57
3358 3759 5.398236 TCGAGATAGAAGAAAGGGATGGAT 58.602 41.667 0.00 0.00 0.00 3.41
3360 3761 5.568423 CGAGATAGAAGAAAGGGATGGATGG 60.568 48.000 0.00 0.00 0.00 3.51
3366 3767 2.174424 AGAAAGGGATGGATGGAAGAGC 59.826 50.000 0.00 0.00 0.00 4.09
3368 3769 1.064824 AGGGATGGATGGAAGAGCCC 61.065 60.000 0.00 0.00 34.97 5.19
3370 3771 0.399833 GGATGGATGGAAGAGCCCTC 59.600 60.000 0.00 0.00 34.97 4.30
3400 3801 3.308705 GCTTGGCTTGGCTTGGCT 61.309 61.111 5.64 0.00 0.00 4.75
3401 3802 2.875804 GCTTGGCTTGGCTTGGCTT 61.876 57.895 5.64 0.00 0.00 4.35
3405 3806 3.308705 GCTTGGCTTGGCTTGGCT 61.309 61.111 5.64 0.00 0.00 4.75
3406 3807 2.875804 GCTTGGCTTGGCTTGGCTT 61.876 57.895 5.64 0.00 0.00 4.35
3408 3809 2.444700 CTTGGCTTGGCTTGGCTTGG 62.445 60.000 5.64 0.00 0.00 3.61
3409 3810 4.383861 GGCTTGGCTTGGCTTGGC 62.384 66.667 0.00 0.00 0.00 4.52
3410 3811 3.618750 GCTTGGCTTGGCTTGGCA 61.619 61.111 2.90 2.90 38.22 4.92
3411 3812 2.341176 CTTGGCTTGGCTTGGCAC 59.659 61.111 6.12 0.00 39.69 5.01
3412 3813 3.562779 CTTGGCTTGGCTTGGCACG 62.563 63.158 6.12 0.00 39.69 5.34
3416 3817 4.347453 CTTGGCTTGGCACGGCAC 62.347 66.667 19.80 6.48 36.62 5.01
3420 3821 4.645921 GCTTGGCACGGCACCAAC 62.646 66.667 6.74 0.00 42.23 3.77
3421 3822 3.977244 CTTGGCACGGCACCAACC 61.977 66.667 2.32 0.00 42.23 3.77
3422 3823 4.514585 TTGGCACGGCACCAACCT 62.515 61.111 2.32 0.00 42.23 3.50
3425 3826 3.216292 GCACGGCACCAACCTGTT 61.216 61.111 0.00 0.00 0.00 3.16
3454 3858 2.046892 ACCGGCACATCAGAGCAC 60.047 61.111 0.00 0.00 32.55 4.40
3480 3884 0.088530 CACGTACGCGAAACTCGTTC 59.911 55.000 15.93 0.00 42.81 3.95
3491 3895 3.314553 GAAACTCGTTCTGATCCGTTCA 58.685 45.455 0.00 0.00 33.03 3.18
3492 3896 2.349297 ACTCGTTCTGATCCGTTCAC 57.651 50.000 0.00 0.00 0.00 3.18
3494 3898 2.254459 CTCGTTCTGATCCGTTCACTG 58.746 52.381 0.00 0.00 0.00 3.66
3495 3899 0.716108 CGTTCTGATCCGTTCACTGC 59.284 55.000 0.00 0.00 0.00 4.40
3496 3900 1.670087 CGTTCTGATCCGTTCACTGCT 60.670 52.381 0.00 0.00 0.00 4.24
3504 3912 1.800315 CGTTCACTGCTACGTCCGG 60.800 63.158 0.00 0.00 33.33 5.14
3541 3953 4.072088 CTGAACGTTCACGCGCCC 62.072 66.667 26.53 0.00 44.43 6.13
3598 4010 8.026607 CCATTATCGCCAACTTTTCTTTTCTAA 58.973 33.333 0.00 0.00 0.00 2.10
3630 4042 4.965119 AGGTTGTGTTTTCTGACTGTTC 57.035 40.909 0.00 0.00 0.00 3.18
3631 4043 3.374058 AGGTTGTGTTTTCTGACTGTTCG 59.626 43.478 0.00 0.00 0.00 3.95
3632 4044 3.372822 GGTTGTGTTTTCTGACTGTTCGA 59.627 43.478 0.00 0.00 0.00 3.71
3633 4045 4.035208 GGTTGTGTTTTCTGACTGTTCGAT 59.965 41.667 0.00 0.00 0.00 3.59
3635 4047 4.188462 TGTGTTTTCTGACTGTTCGATGT 58.812 39.130 0.00 0.00 0.00 3.06
3636 4048 4.033932 TGTGTTTTCTGACTGTTCGATGTG 59.966 41.667 0.00 0.00 0.00 3.21
3637 4049 4.034048 GTGTTTTCTGACTGTTCGATGTGT 59.966 41.667 0.00 0.00 0.00 3.72
3638 4050 4.033932 TGTTTTCTGACTGTTCGATGTGTG 59.966 41.667 0.00 0.00 0.00 3.82
3639 4051 3.452755 TTCTGACTGTTCGATGTGTGT 57.547 42.857 0.00 0.00 0.00 3.72
3640 4052 2.742774 TCTGACTGTTCGATGTGTGTG 58.257 47.619 0.00 0.00 0.00 3.82
3648 4060 1.285578 TCGATGTGTGTGTGTGTGTG 58.714 50.000 0.00 0.00 0.00 3.82
3685 4097 2.353607 CGGAGTACAGCGATCGCC 60.354 66.667 34.89 20.25 43.17 5.54
3753 4165 4.475135 GAGCTCGCCCCCAAGGTC 62.475 72.222 0.00 0.00 38.26 3.85
3766 4178 2.905996 AAGGTCAAGGCCGCCATCA 61.906 57.895 13.15 0.00 0.00 3.07
3767 4179 3.134127 GGTCAAGGCCGCCATCAC 61.134 66.667 13.15 0.00 0.00 3.06
3793 4205 2.979808 CGCACGTCGACGAGAATG 59.020 61.111 41.52 29.25 43.02 2.67
3794 4206 2.497092 CGCACGTCGACGAGAATGG 61.497 63.158 41.52 22.83 43.02 3.16
3796 4208 2.158959 CACGTCGACGAGAATGGCC 61.159 63.158 41.52 0.00 43.02 5.36
3797 4209 2.180769 CGTCGACGAGAATGGCCA 59.819 61.111 33.35 8.56 43.02 5.36
3882 4297 2.109126 GTTCACCATCCTGCTCCGC 61.109 63.158 0.00 0.00 0.00 5.54
4550 4965 4.742201 CACCTGGACCTGCGTCGG 62.742 72.222 0.00 0.00 40.17 4.79
4551 4966 4.988716 ACCTGGACCTGCGTCGGA 62.989 66.667 0.00 0.00 40.17 4.55
4574 4989 2.014093 CTCGTCGCCATGTTCTTCGC 62.014 60.000 0.00 0.00 0.00 4.70
4587 5002 4.143333 TTCGCCTACCGCCTGCTC 62.143 66.667 0.00 0.00 36.73 4.26
4637 5052 2.238942 TGATCCACACACACACACTC 57.761 50.000 0.00 0.00 0.00 3.51
4638 5053 1.762370 TGATCCACACACACACACTCT 59.238 47.619 0.00 0.00 0.00 3.24
4639 5054 2.224042 TGATCCACACACACACACTCTC 60.224 50.000 0.00 0.00 0.00 3.20
4640 5055 1.485124 TCCACACACACACACTCTCT 58.515 50.000 0.00 0.00 0.00 3.10
4641 5056 1.409064 TCCACACACACACACTCTCTC 59.591 52.381 0.00 0.00 0.00 3.20
4642 5057 1.410517 CCACACACACACACTCTCTCT 59.589 52.381 0.00 0.00 0.00 3.10
4643 5058 2.544694 CCACACACACACACTCTCTCTC 60.545 54.545 0.00 0.00 0.00 3.20
4644 5059 2.360483 CACACACACACACTCTCTCTCT 59.640 50.000 0.00 0.00 0.00 3.10
4645 5060 2.621055 ACACACACACACTCTCTCTCTC 59.379 50.000 0.00 0.00 0.00 3.20
4646 5061 2.884012 CACACACACACTCTCTCTCTCT 59.116 50.000 0.00 0.00 0.00 3.10
4647 5062 3.058293 CACACACACACTCTCTCTCTCTC 60.058 52.174 0.00 0.00 0.00 3.20
4648 5063 3.181445 ACACACACACTCTCTCTCTCTCT 60.181 47.826 0.00 0.00 0.00 3.10
4649 5064 3.436704 CACACACACTCTCTCTCTCTCTC 59.563 52.174 0.00 0.00 0.00 3.20
4650 5065 3.327757 ACACACACTCTCTCTCTCTCTCT 59.672 47.826 0.00 0.00 0.00 3.10
4651 5066 4.530553 ACACACACTCTCTCTCTCTCTCTA 59.469 45.833 0.00 0.00 0.00 2.43
4652 5067 5.111989 CACACACTCTCTCTCTCTCTCTAG 58.888 50.000 0.00 0.00 0.00 2.43
4655 5070 2.365617 ACTCTCTCTCTCTCTCTAGCGG 59.634 54.545 0.00 0.00 0.00 5.52
4684 5108 2.031683 GTCGAGCAATTAACCATTCCGG 59.968 50.000 0.00 0.00 42.50 5.14
4690 5114 0.755327 ATTAACCATTCCGGCCAGGC 60.755 55.000 1.26 1.26 40.77 4.85
4718 5142 6.153000 CAGGCAGGATATATAAGTAACGGACT 59.847 42.308 0.00 0.00 41.56 3.85
4719 5143 7.338703 CAGGCAGGATATATAAGTAACGGACTA 59.661 40.741 0.00 0.00 37.44 2.59
4721 5145 7.338957 GGCAGGATATATAAGTAACGGACTACT 59.661 40.741 0.00 0.00 37.44 2.57
4722 5146 8.397148 GCAGGATATATAAGTAACGGACTACTC 58.603 40.741 0.00 0.00 37.44 2.59
4758 5183 0.447801 GCACGGCGACTGAATTGAAT 59.552 50.000 16.62 0.00 0.00 2.57
4762 5187 3.009723 ACGGCGACTGAATTGAATTGAT 58.990 40.909 16.62 0.00 0.00 2.57
4768 5193 4.093408 CGACTGAATTGAATTGATCCGTGT 59.907 41.667 0.00 0.00 0.00 4.49
4805 5230 1.617018 CGTCTGGGAAGATGGCTCCA 61.617 60.000 0.00 0.00 0.00 3.86
4806 5231 0.107459 GTCTGGGAAGATGGCTCCAC 60.107 60.000 0.00 0.00 0.00 4.02
4807 5232 1.225704 CTGGGAAGATGGCTCCACC 59.774 63.158 0.00 0.00 39.84 4.61
4808 5233 1.229951 TGGGAAGATGGCTCCACCT 60.230 57.895 0.00 0.00 40.22 4.00
4816 5241 2.012902 ATGGCTCCACCTACGTACGC 62.013 60.000 16.72 0.00 40.22 4.42
4853 5278 4.322801 CCAAGGGGTTCTAGTTGTCAGTAG 60.323 50.000 0.00 0.00 0.00 2.57
4857 5282 3.586892 GGTTCTAGTTGTCAGTAGCCAC 58.413 50.000 0.00 0.00 0.00 5.01
4858 5283 3.006537 GGTTCTAGTTGTCAGTAGCCACA 59.993 47.826 0.00 0.00 0.00 4.17
4866 5291 4.193826 TGTCAGTAGCCACATCTTCTTC 57.806 45.455 0.00 0.00 0.00 2.87
4871 5296 5.247110 TCAGTAGCCACATCTTCTTCTTCTT 59.753 40.000 0.00 0.00 0.00 2.52
4872 5297 5.580297 CAGTAGCCACATCTTCTTCTTCTTC 59.420 44.000 0.00 0.00 0.00 2.87
4878 5303 5.122082 CCACATCTTCTTCTTCTTCTCTTGC 59.878 44.000 0.00 0.00 0.00 4.01
4892 5317 2.919602 TCTCTTGCTATTTGTTCCCCCT 59.080 45.455 0.00 0.00 0.00 4.79
4897 5322 3.169908 TGCTATTTGTTCCCCCTTTTCC 58.830 45.455 0.00 0.00 0.00 3.13
4901 5326 1.694844 TTGTTCCCCCTTTTCCGTTC 58.305 50.000 0.00 0.00 0.00 3.95
4902 5327 0.848053 TGTTCCCCCTTTTCCGTTCT 59.152 50.000 0.00 0.00 0.00 3.01
4903 5328 1.244816 GTTCCCCCTTTTCCGTTCTG 58.755 55.000 0.00 0.00 0.00 3.02
4904 5329 0.848053 TTCCCCCTTTTCCGTTCTGT 59.152 50.000 0.00 0.00 0.00 3.41
4905 5330 0.848053 TCCCCCTTTTCCGTTCTGTT 59.152 50.000 0.00 0.00 0.00 3.16
4906 5331 0.958822 CCCCCTTTTCCGTTCTGTTG 59.041 55.000 0.00 0.00 0.00 3.33
4907 5332 0.313987 CCCCTTTTCCGTTCTGTTGC 59.686 55.000 0.00 0.00 0.00 4.17
4990 5415 5.069251 CCGGTGTAATGTTATTCCTCTCTCT 59.931 44.000 0.00 0.00 0.00 3.10
4991 5416 6.210078 CGGTGTAATGTTATTCCTCTCTCTC 58.790 44.000 0.00 0.00 0.00 3.20
4992 5417 6.039941 CGGTGTAATGTTATTCCTCTCTCTCT 59.960 42.308 0.00 0.00 0.00 3.10
4993 5418 7.430441 GGTGTAATGTTATTCCTCTCTCTCTC 58.570 42.308 0.00 0.00 0.00 3.20
4994 5419 7.286775 GGTGTAATGTTATTCCTCTCTCTCTCT 59.713 40.741 0.00 0.00 0.00 3.10
4995 5420 8.349983 GTGTAATGTTATTCCTCTCTCTCTCTC 58.650 40.741 0.00 0.00 0.00 3.20
4996 5421 8.278639 TGTAATGTTATTCCTCTCTCTCTCTCT 58.721 37.037 0.00 0.00 0.00 3.10
4997 5422 7.823745 AATGTTATTCCTCTCTCTCTCTCTC 57.176 40.000 0.00 0.00 0.00 3.20
4998 5423 6.575244 TGTTATTCCTCTCTCTCTCTCTCT 57.425 41.667 0.00 0.00 0.00 3.10
4999 5424 6.591935 TGTTATTCCTCTCTCTCTCTCTCTC 58.408 44.000 0.00 0.00 0.00 3.20
5004 5429 6.425210 TCCTCTCTCTCTCTCTCTCTAATG 57.575 45.833 0.00 0.00 0.00 1.90
5070 5502 5.613329 AGAATGCAAATTGCTTCCTTTGAA 58.387 33.333 19.34 0.00 45.31 2.69
5079 5511 9.474920 CAAATTGCTTCCTTTGAAACATACTAA 57.525 29.630 0.00 0.00 34.93 2.24
5081 5513 9.643693 AATTGCTTCCTTTGAAACATACTAATG 57.356 29.630 0.00 0.00 39.17 1.90
5095 5527 0.673985 CTAATGGCGGAGATCGGTCA 59.326 55.000 0.00 0.00 39.69 4.02
5096 5528 0.387929 TAATGGCGGAGATCGGTCAC 59.612 55.000 0.00 0.00 39.69 3.67
5100 5532 0.876342 GGCGGAGATCGGTCACAATC 60.876 60.000 0.00 0.00 39.69 2.67
5101 5533 1.209275 GCGGAGATCGGTCACAATCG 61.209 60.000 0.00 0.00 39.69 3.34
5121 5563 2.033065 CGATGTGCTGCTAAATCTGAGC 60.033 50.000 0.00 0.00 40.53 4.26
5122 5564 1.742761 TGTGCTGCTAAATCTGAGCC 58.257 50.000 0.00 0.00 39.30 4.70
5123 5565 1.020437 GTGCTGCTAAATCTGAGCCC 58.980 55.000 0.00 0.00 39.30 5.19
5124 5566 0.107017 TGCTGCTAAATCTGAGCCCC 60.107 55.000 0.00 0.00 39.30 5.80
5125 5567 1.162800 GCTGCTAAATCTGAGCCCCG 61.163 60.000 0.00 0.00 39.30 5.73
5126 5568 0.179000 CTGCTAAATCTGAGCCCCGT 59.821 55.000 0.00 0.00 39.30 5.28
5127 5569 0.618458 TGCTAAATCTGAGCCCCGTT 59.382 50.000 0.00 0.00 39.30 4.44
5128 5570 1.834896 TGCTAAATCTGAGCCCCGTTA 59.165 47.619 0.00 0.00 39.30 3.18
5129 5571 2.158957 TGCTAAATCTGAGCCCCGTTAG 60.159 50.000 0.00 0.00 39.30 2.34
5130 5572 2.484889 CTAAATCTGAGCCCCGTTAGC 58.515 52.381 0.00 0.00 0.00 3.09
5159 5601 3.620374 CACTCCTCAGTGGAAATGATTCG 59.380 47.826 0.00 0.00 41.63 3.34
5169 5611 6.370442 CAGTGGAAATGATTCGGTACAGTTAA 59.630 38.462 0.00 0.00 36.36 2.01
5173 5618 8.095792 TGGAAATGATTCGGTACAGTTAAACTA 58.904 33.333 0.00 0.00 36.36 2.24
5179 5624 8.550376 TGATTCGGTACAGTTAAACTAAAACAC 58.450 33.333 0.00 0.00 0.00 3.32
5180 5625 6.843069 TCGGTACAGTTAAACTAAAACACC 57.157 37.500 0.00 0.00 0.00 4.16
5198 5643 1.858458 ACCGTGAATTCGCATCGTATG 59.142 47.619 18.57 0.84 0.00 2.39
5220 5666 4.875536 TGCTCTTGACAATGCGTACAATAT 59.124 37.500 8.23 0.00 0.00 1.28
5271 5825 8.673626 ATGTGCATAATAGTGAAAAGAAAACG 57.326 30.769 0.00 0.00 0.00 3.60
5275 5829 8.231837 TGCATAATAGTGAAAAGAAAACGTACC 58.768 33.333 0.00 0.00 0.00 3.34
5304 5858 4.569719 ACCATTGTACCTACCCTTTCTG 57.430 45.455 0.00 0.00 0.00 3.02
5309 5863 7.147602 ACCATTGTACCTACCCTTTCTGTATAC 60.148 40.741 0.00 0.00 0.00 1.47
5333 5899 6.436261 CAGGATGTTCATTTGTAGATCATGC 58.564 40.000 0.00 0.00 35.23 4.06
5354 5924 1.223187 CGGTACATTGGTAATCCCGC 58.777 55.000 0.00 0.00 32.27 6.13
5385 5955 1.504359 CCAAACCGTAAGCGTTCTCA 58.496 50.000 0.00 0.00 36.15 3.27
5409 5979 2.699954 TGAGGTTCGCTTTCATCCTTC 58.300 47.619 0.00 0.00 0.00 3.46
5433 6003 2.842485 GCGAGCATCTTCGAACATTTTG 59.158 45.455 0.00 0.00 43.03 2.44
5434 6004 3.424829 GCGAGCATCTTCGAACATTTTGA 60.425 43.478 0.00 0.00 43.03 2.69
5435 6005 4.329489 CGAGCATCTTCGAACATTTTGAG 58.671 43.478 0.00 0.00 43.03 3.02
5506 6355 9.145865 GAACATTTTCTAAAAGTTGGTGAACAA 57.854 29.630 0.00 0.00 34.17 2.83
5522 6371 8.684386 TGGTGAACAACATTCTAAATAAGTGA 57.316 30.769 0.00 0.00 0.00 3.41
5523 6372 9.126151 TGGTGAACAACATTCTAAATAAGTGAA 57.874 29.630 0.00 0.00 0.00 3.18
5524 6373 9.612620 GGTGAACAACATTCTAAATAAGTGAAG 57.387 33.333 0.00 0.00 0.00 3.02
5525 6374 9.612620 GTGAACAACATTCTAAATAAGTGAAGG 57.387 33.333 0.00 0.00 0.00 3.46
5526 6375 9.349713 TGAACAACATTCTAAATAAGTGAAGGT 57.650 29.630 0.00 0.00 36.48 3.50
5547 6396 7.653767 AGGTTCTCTAAAAATACGTGAACAG 57.346 36.000 0.00 0.00 34.57 3.16
5559 6408 8.582433 AAATACGTGAACAGTTTAAAAATGGG 57.418 30.769 0.00 0.00 0.00 4.00
5566 6415 6.649973 TGAACAGTTTAAAAATGGGCATCATG 59.350 34.615 6.62 0.00 35.99 3.07
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 9.220767 ACAAGCAAAAAGGTTAAATACAAACAA 57.779 25.926 0.00 0.00 35.88 2.83
8 9 8.660373 CACAAGCAAAAAGGTTAAATACAAACA 58.340 29.630 0.00 0.00 35.88 2.83
9 10 8.661257 ACACAAGCAAAAAGGTTAAATACAAAC 58.339 29.630 0.00 0.00 35.88 2.93
10 11 8.779354 ACACAAGCAAAAAGGTTAAATACAAA 57.221 26.923 0.00 0.00 35.88 2.83
11 12 8.779354 AACACAAGCAAAAAGGTTAAATACAA 57.221 26.923 0.00 0.00 35.88 2.41
12 13 8.660373 CAAACACAAGCAAAAAGGTTAAATACA 58.340 29.630 0.00 0.00 35.88 2.29
13 14 8.874816 TCAAACACAAGCAAAAAGGTTAAATAC 58.125 29.630 0.00 0.00 35.88 1.89
14 15 9.436957 TTCAAACACAAGCAAAAAGGTTAAATA 57.563 25.926 0.00 0.00 35.88 1.40
15 16 7.913674 TCAAACACAAGCAAAAAGGTTAAAT 57.086 28.000 0.00 0.00 35.88 1.40
16 17 7.572168 GCTTCAAACACAAGCAAAAAGGTTAAA 60.572 33.333 0.00 0.00 44.87 1.52
17 18 6.128418 GCTTCAAACACAAGCAAAAAGGTTAA 60.128 34.615 0.00 0.00 44.87 2.01
18 19 5.350091 GCTTCAAACACAAGCAAAAAGGTTA 59.650 36.000 0.00 0.00 44.87 2.85
19 20 4.154015 GCTTCAAACACAAGCAAAAAGGTT 59.846 37.500 0.00 0.00 44.87 3.50
20 21 3.684305 GCTTCAAACACAAGCAAAAAGGT 59.316 39.130 0.00 0.00 44.87 3.50
21 22 3.242059 CGCTTCAAACACAAGCAAAAAGG 60.242 43.478 5.35 0.00 45.66 3.11
22 23 3.781926 GCGCTTCAAACACAAGCAAAAAG 60.782 43.478 0.00 0.00 45.66 2.27
23 24 2.093467 GCGCTTCAAACACAAGCAAAAA 59.907 40.909 0.00 0.00 45.66 1.94
24 25 1.658095 GCGCTTCAAACACAAGCAAAA 59.342 42.857 0.00 0.00 45.66 2.44
25 26 1.276415 GCGCTTCAAACACAAGCAAA 58.724 45.000 0.00 0.00 45.66 3.68
26 27 0.172127 TGCGCTTCAAACACAAGCAA 59.828 45.000 9.73 0.00 45.66 3.91
27 28 0.525242 GTGCGCTTCAAACACAAGCA 60.525 50.000 9.73 0.00 45.66 3.91
28 29 0.525242 TGTGCGCTTCAAACACAAGC 60.525 50.000 9.73 0.00 41.11 4.01
29 30 2.124011 ATGTGCGCTTCAAACACAAG 57.876 45.000 9.73 0.00 46.47 3.16
30 31 3.913548 ATATGTGCGCTTCAAACACAA 57.086 38.095 9.73 0.00 46.47 3.33
32 33 3.564511 ACAATATGTGCGCTTCAAACAC 58.435 40.909 9.73 0.00 34.86 3.32
33 34 3.913548 ACAATATGTGCGCTTCAAACA 57.086 38.095 9.73 4.08 0.00 2.83
34 35 4.444056 ACAAACAATATGTGCGCTTCAAAC 59.556 37.500 9.73 0.00 0.00 2.93
35 36 4.443725 CACAAACAATATGTGCGCTTCAAA 59.556 37.500 9.73 0.00 41.42 2.69
36 37 3.980134 CACAAACAATATGTGCGCTTCAA 59.020 39.130 9.73 0.33 41.42 2.69
37 38 3.563508 CACAAACAATATGTGCGCTTCA 58.436 40.909 9.73 8.76 41.42 3.02
45 46 3.367932 CGACTCTCGCACAAACAATATGT 59.632 43.478 0.00 0.00 31.14 2.29
46 47 3.242091 CCGACTCTCGCACAAACAATATG 60.242 47.826 0.00 0.00 38.82 1.78
47 48 2.930040 CCGACTCTCGCACAAACAATAT 59.070 45.455 0.00 0.00 38.82 1.28
48 49 2.333926 CCGACTCTCGCACAAACAATA 58.666 47.619 0.00 0.00 38.82 1.90
49 50 1.148310 CCGACTCTCGCACAAACAAT 58.852 50.000 0.00 0.00 38.82 2.71
50 51 0.878523 CCCGACTCTCGCACAAACAA 60.879 55.000 0.00 0.00 38.82 2.83
51 52 1.300620 CCCGACTCTCGCACAAACA 60.301 57.895 0.00 0.00 38.82 2.83
52 53 2.668280 GCCCGACTCTCGCACAAAC 61.668 63.158 0.00 0.00 38.82 2.93
53 54 2.357034 GCCCGACTCTCGCACAAA 60.357 61.111 0.00 0.00 38.82 2.83
54 55 4.717629 CGCCCGACTCTCGCACAA 62.718 66.667 0.00 0.00 38.82 3.33
63 64 4.760047 AATTCAGCGCGCCCGACT 62.760 61.111 30.33 16.29 36.29 4.18
64 65 3.799755 AAATTCAGCGCGCCCGAC 61.800 61.111 30.33 0.00 36.29 4.79
65 66 3.798650 CAAATTCAGCGCGCCCGA 61.799 61.111 30.33 22.50 36.29 5.14
66 67 4.101790 ACAAATTCAGCGCGCCCG 62.102 61.111 30.33 20.27 37.57 6.13
67 68 1.917782 TACACAAATTCAGCGCGCCC 61.918 55.000 30.33 0.16 0.00 6.13
68 69 0.793104 GTACACAAATTCAGCGCGCC 60.793 55.000 30.33 10.31 0.00 6.53
69 70 1.120147 CGTACACAAATTCAGCGCGC 61.120 55.000 26.66 26.66 0.00 6.86
70 71 1.120147 GCGTACACAAATTCAGCGCG 61.120 55.000 0.00 0.00 34.34 6.86
71 72 0.165944 AGCGTACACAAATTCAGCGC 59.834 50.000 0.00 0.00 43.09 5.92
72 73 1.869503 CAGCGTACACAAATTCAGCG 58.130 50.000 0.00 0.00 0.00 5.18
73 74 1.197721 AGCAGCGTACACAAATTCAGC 59.802 47.619 0.00 0.00 0.00 4.26
74 75 2.413239 CCAGCAGCGTACACAAATTCAG 60.413 50.000 0.00 0.00 0.00 3.02
75 76 1.535028 CCAGCAGCGTACACAAATTCA 59.465 47.619 0.00 0.00 0.00 2.57
76 77 1.804151 TCCAGCAGCGTACACAAATTC 59.196 47.619 0.00 0.00 0.00 2.17
77 78 1.806542 CTCCAGCAGCGTACACAAATT 59.193 47.619 0.00 0.00 0.00 1.82
78 79 1.442769 CTCCAGCAGCGTACACAAAT 58.557 50.000 0.00 0.00 0.00 2.32
79 80 1.227999 GCTCCAGCAGCGTACACAAA 61.228 55.000 0.00 0.00 38.76 2.83
80 81 1.667830 GCTCCAGCAGCGTACACAA 60.668 57.895 0.00 0.00 38.76 3.33
81 82 2.048222 GCTCCAGCAGCGTACACA 60.048 61.111 0.00 0.00 38.76 3.72
104 105 2.736682 GATTTGACGTGGCGGACCG 61.737 63.158 10.29 10.29 39.70 4.79
105 106 1.635663 CTGATTTGACGTGGCGGACC 61.636 60.000 0.00 0.00 0.00 4.46
106 107 0.669318 TCTGATTTGACGTGGCGGAC 60.669 55.000 0.00 0.00 0.00 4.79
107 108 0.669318 GTCTGATTTGACGTGGCGGA 60.669 55.000 0.00 0.00 0.00 5.54
108 109 1.787847 GTCTGATTTGACGTGGCGG 59.212 57.895 0.00 0.00 0.00 6.13
115 116 3.722082 GCGTGTTCATCGTCTGATTTGAC 60.722 47.826 0.00 0.00 32.72 3.18
116 117 2.411748 GCGTGTTCATCGTCTGATTTGA 59.588 45.455 0.00 0.00 32.72 2.69
117 118 2.762472 GCGTGTTCATCGTCTGATTTG 58.238 47.619 0.00 0.00 32.72 2.32
118 119 1.390123 CGCGTGTTCATCGTCTGATTT 59.610 47.619 0.00 0.00 32.72 2.17
119 120 0.992072 CGCGTGTTCATCGTCTGATT 59.008 50.000 0.00 0.00 32.72 2.57
120 121 0.802222 CCGCGTGTTCATCGTCTGAT 60.802 55.000 4.92 0.00 32.72 2.90
121 122 1.443702 CCGCGTGTTCATCGTCTGA 60.444 57.895 4.92 0.00 0.00 3.27
122 123 3.071459 GCCGCGTGTTCATCGTCTG 62.071 63.158 4.92 0.00 0.00 3.51
123 124 2.809601 GCCGCGTGTTCATCGTCT 60.810 61.111 4.92 0.00 0.00 4.18
124 125 2.165362 TTTGCCGCGTGTTCATCGTC 62.165 55.000 4.92 0.00 0.00 4.20
125 126 2.170260 CTTTGCCGCGTGTTCATCGT 62.170 55.000 4.92 0.00 0.00 3.73
126 127 1.509787 CTTTGCCGCGTGTTCATCG 60.510 57.895 4.92 0.00 0.00 3.84
127 128 0.793861 TACTTTGCCGCGTGTTCATC 59.206 50.000 4.92 0.00 0.00 2.92
128 129 0.796312 CTACTTTGCCGCGTGTTCAT 59.204 50.000 4.92 0.00 0.00 2.57
129 130 0.531090 ACTACTTTGCCGCGTGTTCA 60.531 50.000 4.92 0.00 0.00 3.18
130 131 0.584876 AACTACTTTGCCGCGTGTTC 59.415 50.000 4.92 0.00 0.00 3.18
131 132 1.018910 AAACTACTTTGCCGCGTGTT 58.981 45.000 4.92 0.00 0.00 3.32
132 133 1.018910 AAAACTACTTTGCCGCGTGT 58.981 45.000 4.92 0.00 0.00 4.49
133 134 2.113910 AAAAACTACTTTGCCGCGTG 57.886 45.000 4.92 0.00 0.00 5.34
134 135 2.350102 GCTAAAAACTACTTTGCCGCGT 60.350 45.455 4.92 0.00 0.00 6.01
135 136 2.239201 GCTAAAAACTACTTTGCCGCG 58.761 47.619 0.00 0.00 0.00 6.46
136 137 2.239201 CGCTAAAAACTACTTTGCCGC 58.761 47.619 0.00 0.00 0.00 6.53
137 138 3.223157 CACGCTAAAAACTACTTTGCCG 58.777 45.455 0.00 0.00 0.00 5.69
138 139 2.977829 GCACGCTAAAAACTACTTTGCC 59.022 45.455 0.00 0.00 0.00 4.52
139 140 2.977829 GGCACGCTAAAAACTACTTTGC 59.022 45.455 0.00 0.00 0.00 3.68
160 161 4.688419 CAACAGCAGCCCAACGCG 62.688 66.667 3.53 3.53 44.76 6.01
161 162 2.737932 CTTCAACAGCAGCCCAACGC 62.738 60.000 0.00 0.00 37.98 4.84
162 163 1.165907 TCTTCAACAGCAGCCCAACG 61.166 55.000 0.00 0.00 0.00 4.10
163 164 1.068055 CATCTTCAACAGCAGCCCAAC 60.068 52.381 0.00 0.00 0.00 3.77
164 165 1.250328 CATCTTCAACAGCAGCCCAA 58.750 50.000 0.00 0.00 0.00 4.12
165 166 1.246056 GCATCTTCAACAGCAGCCCA 61.246 55.000 0.00 0.00 0.00 5.36
166 167 0.964358 AGCATCTTCAACAGCAGCCC 60.964 55.000 0.00 0.00 0.00 5.19
167 168 0.450983 GAGCATCTTCAACAGCAGCC 59.549 55.000 0.00 0.00 0.00 4.85
168 169 3.992636 GAGCATCTTCAACAGCAGC 57.007 52.632 0.00 0.00 0.00 5.25
180 181 7.041984 CCCTCCGTTTAGTTTTATAAGAGCATC 60.042 40.741 0.00 0.00 0.00 3.91
181 182 6.766467 CCCTCCGTTTAGTTTTATAAGAGCAT 59.234 38.462 0.00 0.00 0.00 3.79
182 183 6.070653 TCCCTCCGTTTAGTTTTATAAGAGCA 60.071 38.462 0.00 0.00 0.00 4.26
183 184 6.343703 TCCCTCCGTTTAGTTTTATAAGAGC 58.656 40.000 0.00 0.00 0.00 4.09
184 185 7.554211 ACTCCCTCCGTTTAGTTTTATAAGAG 58.446 38.462 0.00 0.00 0.00 2.85
185 186 7.486407 ACTCCCTCCGTTTAGTTTTATAAGA 57.514 36.000 0.00 0.00 0.00 2.10
186 187 9.091784 GTTACTCCCTCCGTTTAGTTTTATAAG 57.908 37.037 0.00 0.00 0.00 1.73
187 188 8.592809 TGTTACTCCCTCCGTTTAGTTTTATAA 58.407 33.333 0.00 0.00 0.00 0.98
188 189 8.133024 TGTTACTCCCTCCGTTTAGTTTTATA 57.867 34.615 0.00 0.00 0.00 0.98
189 190 7.008021 TGTTACTCCCTCCGTTTAGTTTTAT 57.992 36.000 0.00 0.00 0.00 1.40
190 191 6.418057 TGTTACTCCCTCCGTTTAGTTTTA 57.582 37.500 0.00 0.00 0.00 1.52
191 192 5.294734 TGTTACTCCCTCCGTTTAGTTTT 57.705 39.130 0.00 0.00 0.00 2.43
192 193 4.961438 TGTTACTCCCTCCGTTTAGTTT 57.039 40.909 0.00 0.00 0.00 2.66
193 194 4.961438 TTGTTACTCCCTCCGTTTAGTT 57.039 40.909 0.00 0.00 0.00 2.24
194 195 4.101430 TGTTTGTTACTCCCTCCGTTTAGT 59.899 41.667 0.00 0.00 0.00 2.24
195 196 4.634199 TGTTTGTTACTCCCTCCGTTTAG 58.366 43.478 0.00 0.00 0.00 1.85
196 197 4.686191 TGTTTGTTACTCCCTCCGTTTA 57.314 40.909 0.00 0.00 0.00 2.01
197 198 3.564053 TGTTTGTTACTCCCTCCGTTT 57.436 42.857 0.00 0.00 0.00 3.60
198 199 3.782656 ATGTTTGTTACTCCCTCCGTT 57.217 42.857 0.00 0.00 0.00 4.44
199 200 3.408634 CAATGTTTGTTACTCCCTCCGT 58.591 45.455 0.00 0.00 0.00 4.69
200 201 2.161609 GCAATGTTTGTTACTCCCTCCG 59.838 50.000 0.00 0.00 0.00 4.63
201 202 3.153919 TGCAATGTTTGTTACTCCCTCC 58.846 45.455 0.00 0.00 0.00 4.30
202 203 5.391312 AATGCAATGTTTGTTACTCCCTC 57.609 39.130 0.00 0.00 0.00 4.30
203 204 5.806654 AAATGCAATGTTTGTTACTCCCT 57.193 34.783 0.00 0.00 0.00 4.20
204 205 6.223120 AGAAAATGCAATGTTTGTTACTCCC 58.777 36.000 0.00 0.00 0.00 4.30
205 206 7.542130 CCTAGAAAATGCAATGTTTGTTACTCC 59.458 37.037 0.00 0.00 0.00 3.85
206 207 7.062255 GCCTAGAAAATGCAATGTTTGTTACTC 59.938 37.037 0.00 0.00 0.00 2.59
248 249 4.942852 TCCAGCGTGATTTTTCACAAAAT 58.057 34.783 6.89 0.00 43.97 1.82
262 264 3.680786 TGGACGTCCTCCAGCGTG 61.681 66.667 33.39 0.00 44.99 5.34
290 292 3.057019 TCGAATTGGTGTTTCTCAGTCG 58.943 45.455 0.00 0.00 0.00 4.18
303 305 5.639506 AGTGACTATTGACTTGTCGAATTGG 59.360 40.000 0.00 0.00 32.96 3.16
351 353 3.003585 CCGGGGCGGTTATTATTAACAAC 59.996 47.826 9.17 0.00 42.73 3.32
513 535 1.161843 GCTTTTGATTCGGTTCGGGA 58.838 50.000 0.00 0.00 0.00 5.14
522 544 0.457337 CGGCTGGCTGCTTTTGATTC 60.457 55.000 16.14 0.00 42.39 2.52
525 547 3.673484 GCGGCTGGCTGCTTTTGA 61.673 61.111 17.87 0.00 44.39 2.69
543 565 3.106407 GGTGAGCGAGCACACGTC 61.106 66.667 16.80 3.54 40.52 4.34
767 789 4.102598 GAGGGGTATATAAAGGAGGGGTC 58.897 52.174 0.00 0.00 0.00 4.46
768 790 3.181387 GGAGGGGTATATAAAGGAGGGGT 60.181 52.174 0.00 0.00 0.00 4.95
792 814 4.048470 GAAGGGGGTGTGGGAGGC 62.048 72.222 0.00 0.00 0.00 4.70
802 824 2.300437 GGTATGAGAAGATCGAAGGGGG 59.700 54.545 0.00 0.00 0.00 5.40
910 941 1.372128 GGCAAAGCGCAAGTGGAAG 60.372 57.895 11.47 0.00 45.17 3.46
966 1008 1.252015 CGGACTTAATTTCGCTCGACG 59.748 52.381 0.00 0.00 45.62 5.12
974 1016 0.300789 CGCGGCTCGGACTTAATTTC 59.699 55.000 0.00 0.00 33.78 2.17
1073 1118 2.264480 CCATCTTGGACGACGGCA 59.736 61.111 1.63 0.00 40.96 5.69
1140 1185 1.065102 TGTAGCGATCTCCTTGCGTAC 59.935 52.381 0.00 0.00 39.47 3.67
1141 1186 1.385528 TGTAGCGATCTCCTTGCGTA 58.614 50.000 0.00 0.00 39.47 4.42
1142 1187 0.747255 ATGTAGCGATCTCCTTGCGT 59.253 50.000 0.00 0.00 39.47 5.24
1143 1188 1.135046 CATGTAGCGATCTCCTTGCG 58.865 55.000 0.00 0.00 39.47 4.85
1144 1189 0.864455 GCATGTAGCGATCTCCTTGC 59.136 55.000 0.00 0.00 34.07 4.01
1155 1200 2.588877 ATCGGCCGTGCATGTAGC 60.589 61.111 27.15 1.70 45.96 3.58
1156 1201 2.302952 CGATCGGCCGTGCATGTAG 61.303 63.158 27.15 5.43 0.00 2.74
1157 1202 1.726533 TACGATCGGCCGTGCATGTA 61.727 55.000 27.15 17.89 43.27 2.29
1158 1203 3.071232 TACGATCGGCCGTGCATGT 62.071 57.895 27.15 18.89 43.27 3.21
1159 1204 2.279186 TACGATCGGCCGTGCATG 60.279 61.111 27.15 14.02 43.27 4.06
1165 1210 2.655364 CAGCAGTACGATCGGCCG 60.655 66.667 22.12 22.12 0.00 6.13
1195 1249 3.350912 CGACTCAAAGTTCAAACCGTTG 58.649 45.455 0.00 2.14 35.95 4.10
1196 1250 2.223180 GCGACTCAAAGTTCAAACCGTT 60.223 45.455 0.00 0.00 0.00 4.44
1245 1299 1.284297 GCAACAAACCATCAAGCGCC 61.284 55.000 2.29 0.00 0.00 6.53
1251 1305 3.304592 CGATGAACTGCAACAAACCATCA 60.305 43.478 0.00 0.00 31.85 3.07
1258 1312 1.525197 GACGTCGATGAACTGCAACAA 59.475 47.619 12.58 0.00 0.00 2.83
1290 1346 2.579738 GCCGTCCTCTCCACCTTC 59.420 66.667 0.00 0.00 0.00 3.46
1326 1382 1.668151 GTGCGATATCCTTCCCGGC 60.668 63.158 0.00 0.00 0.00 6.13
1386 1442 2.288458 GAGTATCGTCCTCTCCTCAACG 59.712 54.545 0.00 0.00 36.50 4.10
1971 2319 1.803519 GAGCAGCACGGAGTCGAAG 60.804 63.158 0.00 0.00 41.61 3.79
2085 2433 2.202610 TCGAGCATGAAGTCGGCG 60.203 61.111 0.00 0.00 36.81 6.46
2142 2490 3.684788 ACAAGTTGCTAATGGTAGAAGCG 59.315 43.478 1.81 0.00 39.14 4.68
2143 2491 5.412904 AGAACAAGTTGCTAATGGTAGAAGC 59.587 40.000 1.81 0.00 36.77 3.86
2146 2494 6.430000 GGAAAGAACAAGTTGCTAATGGTAGA 59.570 38.462 1.81 0.00 0.00 2.59
2147 2495 6.206634 TGGAAAGAACAAGTTGCTAATGGTAG 59.793 38.462 1.81 0.00 0.00 3.18
2148 2496 6.065374 TGGAAAGAACAAGTTGCTAATGGTA 58.935 36.000 1.81 0.00 0.00 3.25
2150 2498 5.452078 TGGAAAGAACAAGTTGCTAATGG 57.548 39.130 1.81 0.00 0.00 3.16
2152 2500 6.899393 TCATGGAAAGAACAAGTTGCTAAT 57.101 33.333 1.81 0.00 0.00 1.73
2153 2501 6.707440 TTCATGGAAAGAACAAGTTGCTAA 57.293 33.333 1.81 0.00 0.00 3.09
2154 2502 6.321181 AGTTTCATGGAAAGAACAAGTTGCTA 59.679 34.615 1.81 0.00 31.87 3.49
2155 2503 5.127682 AGTTTCATGGAAAGAACAAGTTGCT 59.872 36.000 1.81 0.00 31.87 3.91
2156 2504 5.351458 AGTTTCATGGAAAGAACAAGTTGC 58.649 37.500 1.81 0.00 31.87 4.17
2157 2505 6.638468 GCTAGTTTCATGGAAAGAACAAGTTG 59.362 38.462 0.00 0.00 31.87 3.16
2158 2506 6.547510 AGCTAGTTTCATGGAAAGAACAAGTT 59.452 34.615 0.00 0.00 31.87 2.66
2159 2507 6.064717 AGCTAGTTTCATGGAAAGAACAAGT 58.935 36.000 0.00 0.00 31.87 3.16
2160 2508 6.566197 AGCTAGTTTCATGGAAAGAACAAG 57.434 37.500 0.00 0.00 31.87 3.16
2161 2509 7.719633 AGTTAGCTAGTTTCATGGAAAGAACAA 59.280 33.333 0.00 0.00 31.87 2.83
2162 2510 7.224297 AGTTAGCTAGTTTCATGGAAAGAACA 58.776 34.615 0.00 0.00 31.87 3.18
2163 2511 7.674471 AGTTAGCTAGTTTCATGGAAAGAAC 57.326 36.000 0.00 0.00 31.87 3.01
2235 2583 2.772287 AGCTTTCAGTTTCTTCCTCGG 58.228 47.619 0.00 0.00 0.00 4.63
2236 2584 3.929610 CCTAGCTTTCAGTTTCTTCCTCG 59.070 47.826 0.00 0.00 0.00 4.63
2273 2622 2.029970 GGACATAAACATGTACGTGCGG 59.970 50.000 15.12 3.20 34.45 5.69
2276 2625 2.940410 GGGGGACATAAACATGTACGTG 59.060 50.000 13.64 13.64 36.24 4.49
2344 2693 1.028905 TTTGTTTTGCCCGTCTCCAG 58.971 50.000 0.00 0.00 0.00 3.86
2353 2702 0.246360 CCTCCCGGATTTGTTTTGCC 59.754 55.000 0.73 0.00 0.00 4.52
2369 2718 2.433318 GCACTCCACACTCGCCTC 60.433 66.667 0.00 0.00 0.00 4.70
2406 2755 0.036858 GGTTGTGCACCTCCTCTCTC 60.037 60.000 15.69 0.00 43.29 3.20
2459 2812 5.502544 GCTTTGCGCAAAATAGGAGTACTAG 60.503 44.000 32.96 18.88 38.92 2.57
2460 2813 4.331717 GCTTTGCGCAAAATAGGAGTACTA 59.668 41.667 32.96 9.42 38.92 1.82
2461 2814 3.127030 GCTTTGCGCAAAATAGGAGTACT 59.873 43.478 32.96 0.00 38.92 2.73
2462 2815 3.426323 GCTTTGCGCAAAATAGGAGTAC 58.574 45.455 32.96 12.33 38.92 2.73
2463 2816 3.757745 GCTTTGCGCAAAATAGGAGTA 57.242 42.857 32.96 10.88 38.92 2.59
2464 2817 2.636768 GCTTTGCGCAAAATAGGAGT 57.363 45.000 32.96 0.00 38.92 3.85
2545 2907 4.514577 CCCACTAGCAGCGTCCCG 62.515 72.222 0.00 0.00 0.00 5.14
2596 2959 2.520982 CGGGCGAGGGGATGTAGA 60.521 66.667 0.00 0.00 0.00 2.59
2609 2972 4.767255 CTGGACTGTGGAGCGGGC 62.767 72.222 0.00 0.00 0.00 6.13
2610 2973 3.314331 ACTGGACTGTGGAGCGGG 61.314 66.667 0.00 0.00 0.00 6.13
2611 2974 2.047844 CACTGGACTGTGGAGCGG 60.048 66.667 1.86 0.00 34.56 5.52
2613 2976 2.740055 CGCACTGGACTGTGGAGC 60.740 66.667 10.64 0.00 38.31 4.70
2614 2977 1.373497 GACGCACTGGACTGTGGAG 60.373 63.158 10.64 0.00 38.31 3.86
2615 2978 2.734591 GACGCACTGGACTGTGGA 59.265 61.111 10.64 0.00 38.31 4.02
2616 2979 2.357517 GGACGCACTGGACTGTGG 60.358 66.667 10.64 4.52 38.31 4.17
2617 2980 2.357517 GGGACGCACTGGACTGTG 60.358 66.667 5.13 5.13 40.62 3.66
2618 2981 2.524394 AGGGACGCACTGGACTGT 60.524 61.111 0.00 0.00 0.00 3.55
2632 2995 1.426215 GGAGGGAGTAGAGTAGGAGGG 59.574 61.905 0.00 0.00 0.00 4.30
2635 2998 1.890552 ACGGAGGGAGTAGAGTAGGA 58.109 55.000 0.00 0.00 0.00 2.94
2647 3010 3.332034 ACAAGTAATTCGAAACGGAGGG 58.668 45.455 0.00 0.00 0.00 4.30
2648 3011 3.060363 CGACAAGTAATTCGAAACGGAGG 59.940 47.826 0.00 0.00 37.43 4.30
2649 3012 3.481467 GCGACAAGTAATTCGAAACGGAG 60.481 47.826 0.00 0.00 37.43 4.63
2650 3013 2.409378 GCGACAAGTAATTCGAAACGGA 59.591 45.455 0.00 0.00 37.43 4.69
2651 3014 2.156117 TGCGACAAGTAATTCGAAACGG 59.844 45.455 0.00 0.00 37.43 4.44
2652 3015 3.427516 TGCGACAAGTAATTCGAAACG 57.572 42.857 0.00 0.09 37.43 3.60
2653 3016 4.769215 ACTTGCGACAAGTAATTCGAAAC 58.231 39.130 19.21 0.00 37.43 2.78
2654 3017 6.401688 CCATACTTGCGACAAGTAATTCGAAA 60.402 38.462 25.44 11.09 37.43 3.46
2655 3018 5.062934 CCATACTTGCGACAAGTAATTCGAA 59.937 40.000 25.44 0.00 37.43 3.71
2656 3019 4.565166 CCATACTTGCGACAAGTAATTCGA 59.435 41.667 25.44 12.14 37.43 3.71
2657 3020 4.565166 TCCATACTTGCGACAAGTAATTCG 59.435 41.667 25.44 17.44 36.45 3.34
2658 3021 6.037172 ACATCCATACTTGCGACAAGTAATTC 59.963 38.462 25.44 0.00 36.45 2.17
2659 3022 5.880332 ACATCCATACTTGCGACAAGTAATT 59.120 36.000 25.44 14.21 36.45 1.40
2660 3023 5.428253 ACATCCATACTTGCGACAAGTAAT 58.572 37.500 25.44 16.71 36.45 1.89
2661 3024 4.827692 ACATCCATACTTGCGACAAGTAA 58.172 39.130 25.44 15.64 36.45 2.24
2662 3025 4.465632 ACATCCATACTTGCGACAAGTA 57.534 40.909 24.52 24.52 37.18 2.24
2663 3026 3.334583 ACATCCATACTTGCGACAAGT 57.665 42.857 22.53 22.53 0.00 3.16
2664 3027 5.292765 AGATACATCCATACTTGCGACAAG 58.707 41.667 15.16 15.16 0.00 3.16
2665 3028 5.276461 AGATACATCCATACTTGCGACAA 57.724 39.130 0.00 0.00 0.00 3.18
2666 3029 4.937201 AGATACATCCATACTTGCGACA 57.063 40.909 0.00 0.00 0.00 4.35
2667 3030 6.255596 TCTAGATACATCCATACTTGCGAC 57.744 41.667 0.00 0.00 0.00 5.19
2668 3031 6.434340 ACATCTAGATACATCCATACTTGCGA 59.566 38.462 4.54 0.00 0.00 5.10
2669 3032 6.625362 ACATCTAGATACATCCATACTTGCG 58.375 40.000 4.54 0.00 0.00 4.85
2697 3060 9.961265 CGTAGAAATGGATGTATCTACAACTAA 57.039 33.333 11.13 0.00 42.70 2.24
2698 3061 9.346005 TCGTAGAAATGGATGTATCTACAACTA 57.654 33.333 11.13 0.00 42.70 2.24
2699 3062 8.136165 GTCGTAGAAATGGATGTATCTACAACT 58.864 37.037 11.13 0.00 42.70 3.16
2700 3063 7.113124 CGTCGTAGAAATGGATGTATCTACAAC 59.887 40.741 11.13 3.50 42.70 3.32
2701 3064 7.012610 TCGTCGTAGAAATGGATGTATCTACAA 59.987 37.037 11.13 0.00 42.70 2.41
2702 3065 6.484308 TCGTCGTAGAAATGGATGTATCTACA 59.516 38.462 11.13 0.00 42.70 2.74
2703 3066 6.895898 TCGTCGTAGAAATGGATGTATCTAC 58.104 40.000 0.00 0.00 39.69 2.59
2704 3067 6.709397 ACTCGTCGTAGAAATGGATGTATCTA 59.291 38.462 0.00 0.00 39.69 1.98
2705 3068 5.531659 ACTCGTCGTAGAAATGGATGTATCT 59.468 40.000 0.00 0.00 39.69 1.98
2706 3069 5.759963 ACTCGTCGTAGAAATGGATGTATC 58.240 41.667 0.00 0.00 39.69 2.24
2707 3070 5.769484 ACTCGTCGTAGAAATGGATGTAT 57.231 39.130 0.00 0.00 39.69 2.29
2708 3071 6.682423 TTACTCGTCGTAGAAATGGATGTA 57.318 37.500 0.00 0.00 39.69 2.29
2709 3072 5.571784 TTACTCGTCGTAGAAATGGATGT 57.428 39.130 0.00 0.00 39.69 3.06
2710 3073 7.337718 CAAATTACTCGTCGTAGAAATGGATG 58.662 38.462 0.00 0.00 39.69 3.51
2711 3074 6.479001 CCAAATTACTCGTCGTAGAAATGGAT 59.521 38.462 0.00 0.00 39.69 3.41
2712 3075 5.808540 CCAAATTACTCGTCGTAGAAATGGA 59.191 40.000 0.00 0.00 39.69 3.41
2713 3076 5.808540 TCCAAATTACTCGTCGTAGAAATGG 59.191 40.000 0.00 0.00 39.69 3.16
2714 3077 6.880822 TCCAAATTACTCGTCGTAGAAATG 57.119 37.500 0.00 0.00 39.69 2.32
2715 3078 7.011109 CCATTCCAAATTACTCGTCGTAGAAAT 59.989 37.037 0.00 0.00 39.69 2.17
2716 3079 6.311935 CCATTCCAAATTACTCGTCGTAGAAA 59.688 38.462 0.00 0.00 39.69 2.52
2717 3080 5.808540 CCATTCCAAATTACTCGTCGTAGAA 59.191 40.000 0.00 0.00 39.69 2.10
2718 3081 5.125900 TCCATTCCAAATTACTCGTCGTAGA 59.874 40.000 0.00 0.00 0.00 2.59
2719 3082 5.345702 TCCATTCCAAATTACTCGTCGTAG 58.654 41.667 0.00 0.00 0.00 3.51
2720 3083 5.327616 TCCATTCCAAATTACTCGTCGTA 57.672 39.130 0.00 0.00 0.00 3.43
2721 3084 4.181578 CTCCATTCCAAATTACTCGTCGT 58.818 43.478 0.00 0.00 0.00 4.34
2722 3085 3.555956 CCTCCATTCCAAATTACTCGTCG 59.444 47.826 0.00 0.00 0.00 5.12
2723 3086 3.877508 CCCTCCATTCCAAATTACTCGTC 59.122 47.826 0.00 0.00 0.00 4.20
2724 3087 3.521937 TCCCTCCATTCCAAATTACTCGT 59.478 43.478 0.00 0.00 0.00 4.18
2725 3088 4.130118 CTCCCTCCATTCCAAATTACTCG 58.870 47.826 0.00 0.00 0.00 4.18
2726 3089 5.117406 ACTCCCTCCATTCCAAATTACTC 57.883 43.478 0.00 0.00 0.00 2.59
2727 3090 5.731678 AGTACTCCCTCCATTCCAAATTACT 59.268 40.000 0.00 0.00 0.00 2.24
2728 3091 6.002653 AGTACTCCCTCCATTCCAAATTAC 57.997 41.667 0.00 0.00 0.00 1.89
2729 3092 6.011981 ACAAGTACTCCCTCCATTCCAAATTA 60.012 38.462 0.00 0.00 0.00 1.40
2730 3093 5.222337 ACAAGTACTCCCTCCATTCCAAATT 60.222 40.000 0.00 0.00 0.00 1.82
2731 3094 4.292306 ACAAGTACTCCCTCCATTCCAAAT 59.708 41.667 0.00 0.00 0.00 2.32
2732 3095 3.655777 ACAAGTACTCCCTCCATTCCAAA 59.344 43.478 0.00 0.00 0.00 3.28
2733 3096 3.256704 ACAAGTACTCCCTCCATTCCAA 58.743 45.455 0.00 0.00 0.00 3.53
2734 3097 2.838202 GACAAGTACTCCCTCCATTCCA 59.162 50.000 0.00 0.00 0.00 3.53
2735 3098 3.108376 AGACAAGTACTCCCTCCATTCC 58.892 50.000 0.00 0.00 0.00 3.01
2736 3099 4.468153 AGAAGACAAGTACTCCCTCCATTC 59.532 45.833 0.00 0.00 0.00 2.67
2737 3100 4.430441 AGAAGACAAGTACTCCCTCCATT 58.570 43.478 0.00 0.00 0.00 3.16
2738 3101 4.027437 GAGAAGACAAGTACTCCCTCCAT 58.973 47.826 0.00 0.00 0.00 3.41
2739 3102 3.432378 GAGAAGACAAGTACTCCCTCCA 58.568 50.000 0.00 0.00 0.00 3.86
2740 3103 2.761767 GGAGAAGACAAGTACTCCCTCC 59.238 54.545 0.00 2.99 41.89 4.30
2741 3104 2.424246 CGGAGAAGACAAGTACTCCCTC 59.576 54.545 0.00 0.00 43.98 4.30
2742 3105 2.448453 CGGAGAAGACAAGTACTCCCT 58.552 52.381 0.00 0.00 43.98 4.20
2743 3106 1.477295 CCGGAGAAGACAAGTACTCCC 59.523 57.143 0.00 0.00 43.98 4.30
2744 3107 1.135053 GCCGGAGAAGACAAGTACTCC 60.135 57.143 5.05 0.00 43.58 3.85
2745 3108 1.467713 CGCCGGAGAAGACAAGTACTC 60.468 57.143 5.05 0.00 0.00 2.59
2746 3109 0.526662 CGCCGGAGAAGACAAGTACT 59.473 55.000 5.05 0.00 0.00 2.73
2747 3110 0.243095 ACGCCGGAGAAGACAAGTAC 59.757 55.000 13.83 0.00 0.00 2.73
2748 3111 1.741706 CTACGCCGGAGAAGACAAGTA 59.258 52.381 13.83 0.00 0.00 2.24
2749 3112 0.526662 CTACGCCGGAGAAGACAAGT 59.473 55.000 13.83 0.00 0.00 3.16
2750 3113 0.526662 ACTACGCCGGAGAAGACAAG 59.473 55.000 13.83 1.81 0.00 3.16
2751 3114 0.242825 CACTACGCCGGAGAAGACAA 59.757 55.000 13.83 0.00 0.00 3.18
2752 3115 0.892358 ACACTACGCCGGAGAAGACA 60.892 55.000 13.83 0.00 0.00 3.41
2753 3116 0.456312 CACACTACGCCGGAGAAGAC 60.456 60.000 13.83 0.00 0.00 3.01
2754 3117 1.592400 CCACACTACGCCGGAGAAGA 61.592 60.000 13.83 0.00 0.00 2.87
2755 3118 1.153823 CCACACTACGCCGGAGAAG 60.154 63.158 13.83 3.79 0.00 2.85
2756 3119 1.904865 ACCACACTACGCCGGAGAA 60.905 57.895 13.83 0.00 0.00 2.87
2772 3135 3.241067 TGATTAGACAGCGGTTACACC 57.759 47.619 0.00 0.00 34.05 4.16
2773 3136 3.370061 GGTTGATTAGACAGCGGTTACAC 59.630 47.826 0.00 0.00 0.00 2.90
2781 3144 1.383523 GGGCAGGTTGATTAGACAGC 58.616 55.000 0.00 0.00 0.00 4.40
2817 3204 1.444212 CCCGTGAAAATGGCAAGCG 60.444 57.895 0.00 0.00 0.00 4.68
2822 3209 2.029470 TCAAATCACCCGTGAAAATGGC 60.029 45.455 0.91 0.00 43.58 4.40
2826 3213 2.938838 AGGTCAAATCACCCGTGAAAA 58.061 42.857 0.91 0.00 43.58 2.29
2848 3235 4.705337 AAACTTGTAAAAGACAACGGCA 57.295 36.364 0.00 0.00 43.30 5.69
2853 3240 7.380431 TCTTCGGAAAACTTGTAAAAGACAA 57.620 32.000 0.00 0.00 46.03 3.18
2855 3242 7.691158 TCTTCTTCGGAAAACTTGTAAAAGAC 58.309 34.615 0.00 0.00 33.12 3.01
2856 3243 7.852971 TCTTCTTCGGAAAACTTGTAAAAGA 57.147 32.000 0.00 0.00 33.12 2.52
2860 3250 9.550406 TCTTTATCTTCTTCGGAAAACTTGTAA 57.450 29.630 0.00 0.00 33.12 2.41
2872 3262 6.510317 GCTCGGGATTTTCTTTATCTTCTTCG 60.510 42.308 0.00 0.00 0.00 3.79
2894 3284 2.290093 GCAAATGGCTAGAGATGTGCTC 59.710 50.000 8.61 0.00 40.96 4.26
2938 3330 2.029244 CGTGCATAAAGTGAGGTTAGCG 59.971 50.000 0.00 0.00 0.00 4.26
2955 3353 3.056313 GCAAGCCTCCAATCCGTGC 62.056 63.158 0.00 0.00 0.00 5.34
2959 3357 1.203287 GTTTCAGCAAGCCTCCAATCC 59.797 52.381 0.00 0.00 0.00 3.01
2962 3360 1.321474 CAGTTTCAGCAAGCCTCCAA 58.679 50.000 0.00 0.00 0.00 3.53
2975 3373 2.788786 CACCGAAAACACATGCAGTTTC 59.211 45.455 14.86 10.21 38.17 2.78
2976 3374 2.808244 CACCGAAAACACATGCAGTTT 58.192 42.857 10.19 10.19 40.66 2.66
2993 3391 3.991773 TGATGAAAAGTACGTACAGCACC 59.008 43.478 26.55 10.74 0.00 5.01
3010 3408 7.662669 TCATTTCTTCATTCACTTGTCTGATGA 59.337 33.333 0.00 0.00 0.00 2.92
3026 3424 7.870954 ACGTGTCAACTAGTATTCATTTCTTCA 59.129 33.333 0.00 0.00 0.00 3.02
3027 3425 8.240883 ACGTGTCAACTAGTATTCATTTCTTC 57.759 34.615 0.00 0.00 0.00 2.87
3030 3428 7.758528 ACCTACGTGTCAACTAGTATTCATTTC 59.241 37.037 0.00 0.00 0.00 2.17
3034 3432 7.105588 TCTACCTACGTGTCAACTAGTATTCA 58.894 38.462 0.00 0.00 0.00 2.57
3035 3433 7.545362 TCTACCTACGTGTCAACTAGTATTC 57.455 40.000 0.00 0.00 0.00 1.75
3036 3434 8.517062 AATCTACCTACGTGTCAACTAGTATT 57.483 34.615 0.00 0.00 0.00 1.89
3037 3435 9.270640 CTAATCTACCTACGTGTCAACTAGTAT 57.729 37.037 0.00 0.00 0.00 2.12
3038 3436 8.478066 TCTAATCTACCTACGTGTCAACTAGTA 58.522 37.037 0.00 0.00 0.00 1.82
3039 3437 7.334090 TCTAATCTACCTACGTGTCAACTAGT 58.666 38.462 0.00 0.00 0.00 2.57
3040 3438 7.783090 TCTAATCTACCTACGTGTCAACTAG 57.217 40.000 0.00 0.00 0.00 2.57
3048 3446 4.153835 GGACGGATCTAATCTACCTACGTG 59.846 50.000 0.00 0.00 31.72 4.49
3059 3457 0.666913 CGGTGTCGGACGGATCTAAT 59.333 55.000 3.34 0.00 0.00 1.73
3060 3458 2.100846 CGGTGTCGGACGGATCTAA 58.899 57.895 3.34 0.00 0.00 2.10
3061 3459 3.817787 CGGTGTCGGACGGATCTA 58.182 61.111 3.34 0.00 0.00 1.98
3078 3476 0.823356 TCCAACTGAAAGCTGCCACC 60.823 55.000 0.00 0.00 37.60 4.61
3163 3561 1.070445 CCTCATCCTCATCTCAGGTGC 59.930 57.143 0.00 0.00 34.76 5.01
3164 3562 2.675583 TCCTCATCCTCATCTCAGGTG 58.324 52.381 0.00 0.00 34.76 4.00
3166 3564 3.508426 TCATCCTCATCCTCATCTCAGG 58.492 50.000 0.00 0.00 34.40 3.86
3167 3565 3.512329 CCTCATCCTCATCCTCATCTCAG 59.488 52.174 0.00 0.00 0.00 3.35
3168 3566 3.141649 TCCTCATCCTCATCCTCATCTCA 59.858 47.826 0.00 0.00 0.00 3.27
3169 3567 3.765511 CTCCTCATCCTCATCCTCATCTC 59.234 52.174 0.00 0.00 0.00 2.75
3170 3568 3.502672 CCTCCTCATCCTCATCCTCATCT 60.503 52.174 0.00 0.00 0.00 2.90
3171 3569 2.833338 CCTCCTCATCCTCATCCTCATC 59.167 54.545 0.00 0.00 0.00 2.92
3172 3570 2.453991 TCCTCCTCATCCTCATCCTCAT 59.546 50.000 0.00 0.00 0.00 2.90
3173 3571 1.862242 TCCTCCTCATCCTCATCCTCA 59.138 52.381 0.00 0.00 0.00 3.86
3174 3572 2.692709 TCCTCCTCATCCTCATCCTC 57.307 55.000 0.00 0.00 0.00 3.71
3175 3573 2.427593 CCTTCCTCCTCATCCTCATCCT 60.428 54.545 0.00 0.00 0.00 3.24
3176 3574 1.977129 CCTTCCTCCTCATCCTCATCC 59.023 57.143 0.00 0.00 0.00 3.51
3189 3587 0.391228 GGATCCGCTTCTCCTTCCTC 59.609 60.000 0.00 0.00 0.00 3.71
3241 3640 0.609406 TGTAGCGACACAGGCTCTCT 60.609 55.000 0.00 0.00 41.80 3.10
3242 3641 0.179150 CTGTAGCGACACAGGCTCTC 60.179 60.000 8.53 0.00 41.88 3.20
3243 3642 1.886585 CTGTAGCGACACAGGCTCT 59.113 57.895 8.53 0.00 41.88 4.09
3244 3643 4.485554 CTGTAGCGACACAGGCTC 57.514 61.111 8.53 0.00 41.88 4.70
3279 3680 4.402056 TCCTCCTGTCTAATTAAAGCGG 57.598 45.455 0.00 0.00 0.00 5.52
3281 3682 8.457238 AATGATTCCTCCTGTCTAATTAAAGC 57.543 34.615 0.00 0.00 0.00 3.51
3282 3683 9.618890 TGAATGATTCCTCCTGTCTAATTAAAG 57.381 33.333 2.26 0.00 0.00 1.85
3286 3687 9.484806 AAAATGAATGATTCCTCCTGTCTAATT 57.515 29.630 2.26 0.00 0.00 1.40
3287 3688 9.129532 GAAAATGAATGATTCCTCCTGTCTAAT 57.870 33.333 2.26 0.00 0.00 1.73
3304 3705 5.404946 CAGAATTGCACCGAGAAAATGAAT 58.595 37.500 0.00 0.00 0.00 2.57
3305 3706 4.797471 CAGAATTGCACCGAGAAAATGAA 58.203 39.130 0.00 0.00 0.00 2.57
3306 3707 4.424061 CAGAATTGCACCGAGAAAATGA 57.576 40.909 0.00 0.00 0.00 2.57
3351 3752 0.399833 GAGGGCTCTTCCATCCATCC 59.600 60.000 0.00 0.00 39.67 3.51
3366 3767 2.197283 AGCAGCAGAAAAGAAGAGGG 57.803 50.000 0.00 0.00 0.00 4.30
3368 3769 2.351544 GCCAAGCAGCAGAAAAGAAGAG 60.352 50.000 0.00 0.00 0.00 2.85
3370 3771 1.612463 AGCCAAGCAGCAGAAAAGAAG 59.388 47.619 0.00 0.00 34.23 2.85
3405 3806 4.514585 AGGTTGGTGCCGTGCCAA 62.515 61.111 0.00 0.00 43.04 4.52
3408 3809 3.194272 GAACAGGTTGGTGCCGTGC 62.194 63.158 0.00 0.00 0.00 5.34
3409 3810 1.525995 AGAACAGGTTGGTGCCGTG 60.526 57.895 0.00 0.00 0.00 4.94
3410 3811 1.525995 CAGAACAGGTTGGTGCCGT 60.526 57.895 0.00 0.00 0.00 5.68
3411 3812 1.101049 AACAGAACAGGTTGGTGCCG 61.101 55.000 0.00 0.00 0.00 5.69
3412 3813 0.385390 CAACAGAACAGGTTGGTGCC 59.615 55.000 0.00 0.00 41.41 5.01
3413 3814 1.334869 CTCAACAGAACAGGTTGGTGC 59.665 52.381 5.55 0.00 44.38 5.01
3414 3815 2.355756 CACTCAACAGAACAGGTTGGTG 59.644 50.000 5.55 8.35 44.38 4.17
3415 3816 2.643551 CACTCAACAGAACAGGTTGGT 58.356 47.619 5.55 0.81 44.38 3.67
3416 3817 1.334869 GCACTCAACAGAACAGGTTGG 59.665 52.381 5.55 0.28 44.38 3.77
3417 3818 2.016318 TGCACTCAACAGAACAGGTTG 58.984 47.619 0.00 0.00 45.34 3.77
3418 3819 2.017049 GTGCACTCAACAGAACAGGTT 58.983 47.619 10.32 0.00 0.00 3.50
3419 3820 1.668419 GTGCACTCAACAGAACAGGT 58.332 50.000 10.32 0.00 0.00 4.00
3420 3821 0.947244 GGTGCACTCAACAGAACAGG 59.053 55.000 17.98 0.00 0.00 4.00
3421 3822 0.583438 CGGTGCACTCAACAGAACAG 59.417 55.000 17.98 0.00 0.00 3.16
3422 3823 0.813610 CCGGTGCACTCAACAGAACA 60.814 55.000 17.98 0.00 0.00 3.18
3423 3824 1.941812 CCGGTGCACTCAACAGAAC 59.058 57.895 17.98 0.00 0.00 3.01
3424 3825 1.891919 GCCGGTGCACTCAACAGAA 60.892 57.895 17.98 0.00 37.47 3.02
3425 3826 2.280797 GCCGGTGCACTCAACAGA 60.281 61.111 17.98 0.00 37.47 3.41
3468 3872 0.640768 CGGATCAGAACGAGTTTCGC 59.359 55.000 0.00 0.00 45.12 4.70
3480 3884 1.135373 ACGTAGCAGTGAACGGATCAG 60.135 52.381 18.79 0.00 43.25 2.90
3491 3895 1.674962 GAATCTACCGGACGTAGCAGT 59.325 52.381 9.46 0.00 43.72 4.40
3492 3896 1.001597 GGAATCTACCGGACGTAGCAG 60.002 57.143 9.46 0.00 43.72 4.24
3494 3898 3.861664 GGAATCTACCGGACGTAGC 57.138 57.895 9.46 0.00 43.72 3.58
3504 3912 0.446222 TTTGCGCTTGCGGAATCTAC 59.554 50.000 21.04 1.60 43.34 2.59
3598 4010 1.828979 ACACAACCTTTCACGTGGTT 58.171 45.000 17.00 9.08 46.33 3.67
3630 4042 1.006086 ACACACACACACACACATCG 58.994 50.000 0.00 0.00 0.00 3.84
3631 4043 1.737236 ACACACACACACACACACATC 59.263 47.619 0.00 0.00 0.00 3.06
3632 4044 1.468127 CACACACACACACACACACAT 59.532 47.619 0.00 0.00 0.00 3.21
3633 4045 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
3635 4047 0.886490 TGCACACACACACACACACA 60.886 50.000 0.00 0.00 0.00 3.72
3636 4048 0.179192 CTGCACACACACACACACAC 60.179 55.000 0.00 0.00 0.00 3.82
3637 4049 1.304509 CCTGCACACACACACACACA 61.305 55.000 0.00 0.00 0.00 3.72
3638 4050 1.429021 CCTGCACACACACACACAC 59.571 57.895 0.00 0.00 0.00 3.82
3639 4051 2.405805 GCCTGCACACACACACACA 61.406 57.895 0.00 0.00 0.00 3.72
3640 4052 1.656818 AAGCCTGCACACACACACAC 61.657 55.000 0.00 0.00 0.00 3.82
3987 4402 3.314331 CGGTCCTGCACCTCCAGT 61.314 66.667 0.00 0.00 44.21 4.00
4407 4822 2.651382 TGGCCCAGATCATGAAGATG 57.349 50.000 0.00 0.00 37.00 2.90
4536 4951 4.803426 GCTCCGACGCAGGTCCAG 62.803 72.222 0.00 0.00 40.17 3.86
4550 4965 3.665675 AACATGGCGACGAGGGCTC 62.666 63.158 0.00 0.00 0.00 4.70
4551 4966 3.665675 GAACATGGCGACGAGGGCT 62.666 63.158 0.00 0.00 0.00 5.19
4628 5043 3.327757 AGAGAGAGAGAGAGAGTGTGTGT 59.672 47.826 0.00 0.00 0.00 3.72
4629 5044 3.942829 AGAGAGAGAGAGAGAGTGTGTG 58.057 50.000 0.00 0.00 0.00 3.82
4630 5045 4.383118 GCTAGAGAGAGAGAGAGAGTGTGT 60.383 50.000 0.00 0.00 0.00 3.72
4631 5046 4.122776 GCTAGAGAGAGAGAGAGAGTGTG 58.877 52.174 0.00 0.00 0.00 3.82
4632 5047 3.181475 CGCTAGAGAGAGAGAGAGAGTGT 60.181 52.174 0.00 0.00 0.00 3.55
4634 5049 2.365617 CCGCTAGAGAGAGAGAGAGAGT 59.634 54.545 0.00 0.00 0.00 3.24
4635 5050 2.628178 TCCGCTAGAGAGAGAGAGAGAG 59.372 54.545 0.00 0.00 0.00 3.20
4636 5051 2.628178 CTCCGCTAGAGAGAGAGAGAGA 59.372 54.545 4.60 0.00 46.50 3.10
4637 5052 2.868044 GCTCCGCTAGAGAGAGAGAGAG 60.868 59.091 12.95 2.66 46.50 3.20
4638 5053 1.070134 GCTCCGCTAGAGAGAGAGAGA 59.930 57.143 12.95 0.00 46.50 3.10
4639 5054 1.202639 TGCTCCGCTAGAGAGAGAGAG 60.203 57.143 12.95 3.91 46.50 3.20
4640 5055 0.833949 TGCTCCGCTAGAGAGAGAGA 59.166 55.000 12.95 0.00 46.50 3.10
4641 5056 1.229428 CTGCTCCGCTAGAGAGAGAG 58.771 60.000 12.95 4.54 46.50 3.20
4642 5057 0.179032 CCTGCTCCGCTAGAGAGAGA 60.179 60.000 12.95 0.16 46.50 3.10
4643 5058 1.795170 GCCTGCTCCGCTAGAGAGAG 61.795 65.000 12.95 10.01 46.50 3.20
4644 5059 1.826054 GCCTGCTCCGCTAGAGAGA 60.826 63.158 12.95 0.48 46.50 3.10
4645 5060 2.727544 GCCTGCTCCGCTAGAGAG 59.272 66.667 4.90 0.00 46.50 3.20
4646 5061 3.212682 CGCCTGCTCCGCTAGAGA 61.213 66.667 4.90 0.00 46.50 3.10
4647 5062 3.477224 GACGCCTGCTCCGCTAGAG 62.477 68.421 0.00 0.00 46.29 2.43
4648 5063 3.518998 GACGCCTGCTCCGCTAGA 61.519 66.667 0.00 0.00 0.00 2.43
4649 5064 4.914420 CGACGCCTGCTCCGCTAG 62.914 72.222 0.00 0.00 0.00 3.42
4655 5070 0.806102 TAATTGCTCGACGCCTGCTC 60.806 55.000 4.73 0.00 38.05 4.26
4662 5086 2.285602 CGGAATGGTTAATTGCTCGACG 60.286 50.000 0.00 0.00 34.59 5.12
4668 5092 0.820871 TGGCCGGAATGGTTAATTGC 59.179 50.000 5.05 0.00 41.21 3.56
4670 5094 1.775385 CCTGGCCGGAATGGTTAATT 58.225 50.000 15.09 0.00 41.21 1.40
4690 5114 6.100004 CGTTACTTATATATCCTGCCTGTGG 58.900 44.000 0.00 0.00 0.00 4.17
4692 5116 6.014647 TCCGTTACTTATATATCCTGCCTGT 58.985 40.000 0.00 0.00 0.00 4.00
4693 5117 6.153000 AGTCCGTTACTTATATATCCTGCCTG 59.847 42.308 0.00 0.00 33.35 4.85
4694 5118 6.254522 AGTCCGTTACTTATATATCCTGCCT 58.745 40.000 0.00 0.00 33.35 4.75
4695 5119 6.527057 AGTCCGTTACTTATATATCCTGCC 57.473 41.667 0.00 0.00 33.35 4.85
4779 5204 4.069232 CTTCCCAGACGCCAGCGA 62.069 66.667 20.32 0.00 42.83 4.93
4782 5207 1.153289 CCATCTTCCCAGACGCCAG 60.153 63.158 0.00 0.00 0.00 4.85
4783 5208 2.989639 CCATCTTCCCAGACGCCA 59.010 61.111 0.00 0.00 0.00 5.69
4790 5215 0.044092 TAGGTGGAGCCATCTTCCCA 59.956 55.000 7.73 0.00 38.50 4.37
4805 5230 3.058160 AGCACCGCGTACGTAGGT 61.058 61.111 24.79 24.79 39.12 3.08
4806 5231 2.578713 CAGCACCGCGTACGTAGG 60.579 66.667 23.70 23.70 37.70 3.18
4807 5232 2.578713 CCAGCACCGCGTACGTAG 60.579 66.667 17.90 10.98 37.70 3.51
4808 5233 3.055110 TCCAGCACCGCGTACGTA 61.055 61.111 17.90 0.00 37.70 3.57
4831 5256 3.771577 ACTGACAACTAGAACCCCTTG 57.228 47.619 0.00 0.00 0.00 3.61
4840 5265 4.727507 AGATGTGGCTACTGACAACTAG 57.272 45.455 0.64 0.00 29.94 2.57
4849 5274 5.483583 AGAAGAAGAAGAAGATGTGGCTACT 59.516 40.000 0.64 0.00 0.00 2.57
4853 5278 4.831107 AGAGAAGAAGAAGAAGATGTGGC 58.169 43.478 0.00 0.00 0.00 5.01
4857 5282 8.721019 AATAGCAAGAGAAGAAGAAGAAGATG 57.279 34.615 0.00 0.00 0.00 2.90
4858 5283 9.165035 CAAATAGCAAGAGAAGAAGAAGAAGAT 57.835 33.333 0.00 0.00 0.00 2.40
4866 5291 5.124617 GGGGAACAAATAGCAAGAGAAGAAG 59.875 44.000 0.00 0.00 0.00 2.85
4871 5296 2.919602 AGGGGGAACAAATAGCAAGAGA 59.080 45.455 0.00 0.00 0.00 3.10
4872 5297 3.372440 AGGGGGAACAAATAGCAAGAG 57.628 47.619 0.00 0.00 0.00 2.85
4878 5303 3.427573 ACGGAAAAGGGGGAACAAATAG 58.572 45.455 0.00 0.00 0.00 1.73
4892 5317 2.096248 ACCAAGCAACAGAACGGAAAA 58.904 42.857 0.00 0.00 0.00 2.29
4897 5322 1.063469 ACGAAACCAAGCAACAGAACG 59.937 47.619 0.00 0.00 0.00 3.95
4901 5326 3.420839 AGAAACGAAACCAAGCAACAG 57.579 42.857 0.00 0.00 0.00 3.16
4902 5327 3.506810 CAAGAAACGAAACCAAGCAACA 58.493 40.909 0.00 0.00 0.00 3.33
4903 5328 2.281498 GCAAGAAACGAAACCAAGCAAC 59.719 45.455 0.00 0.00 0.00 4.17
4904 5329 2.165437 AGCAAGAAACGAAACCAAGCAA 59.835 40.909 0.00 0.00 0.00 3.91
4905 5330 1.748493 AGCAAGAAACGAAACCAAGCA 59.252 42.857 0.00 0.00 0.00 3.91
4906 5331 2.119457 CAGCAAGAAACGAAACCAAGC 58.881 47.619 0.00 0.00 0.00 4.01
4907 5332 2.357637 TCCAGCAAGAAACGAAACCAAG 59.642 45.455 0.00 0.00 0.00 3.61
5070 5502 3.306088 CCGATCTCCGCCATTAGTATGTT 60.306 47.826 0.00 0.00 36.84 2.71
5079 5511 1.613317 TTGTGACCGATCTCCGCCAT 61.613 55.000 0.00 0.00 36.84 4.40
5080 5512 1.613317 ATTGTGACCGATCTCCGCCA 61.613 55.000 0.00 0.00 36.84 5.69
5081 5513 0.876342 GATTGTGACCGATCTCCGCC 60.876 60.000 0.00 0.00 36.84 6.13
5095 5527 4.034858 CAGATTTAGCAGCACATCGATTGT 59.965 41.667 0.00 0.00 39.91 2.71
5096 5528 4.271776 TCAGATTTAGCAGCACATCGATTG 59.728 41.667 0.00 0.00 0.00 2.67
5100 5532 2.033065 GCTCAGATTTAGCAGCACATCG 60.033 50.000 0.00 0.00 39.83 3.84
5101 5533 2.290093 GGCTCAGATTTAGCAGCACATC 59.710 50.000 0.00 0.00 41.93 3.06
5112 5544 0.618458 TGCTAACGGGGCTCAGATTT 59.382 50.000 0.00 0.00 0.00 2.17
5121 5563 1.146263 GTGAGGGATGCTAACGGGG 59.854 63.158 0.00 0.00 0.00 5.73
5122 5564 0.105039 GAGTGAGGGATGCTAACGGG 59.895 60.000 0.00 0.00 0.00 5.28
5123 5565 0.105039 GGAGTGAGGGATGCTAACGG 59.895 60.000 0.00 0.00 0.00 4.44
5124 5566 1.067821 GAGGAGTGAGGGATGCTAACG 59.932 57.143 0.00 0.00 0.00 3.18
5125 5567 2.102252 CTGAGGAGTGAGGGATGCTAAC 59.898 54.545 0.00 0.00 0.00 2.34
5126 5568 2.292521 ACTGAGGAGTGAGGGATGCTAA 60.293 50.000 0.00 0.00 0.00 3.09
5127 5569 1.289231 ACTGAGGAGTGAGGGATGCTA 59.711 52.381 0.00 0.00 0.00 3.49
5128 5570 0.042431 ACTGAGGAGTGAGGGATGCT 59.958 55.000 0.00 0.00 0.00 3.79
5129 5571 2.601664 ACTGAGGAGTGAGGGATGC 58.398 57.895 0.00 0.00 0.00 3.91
5152 5594 9.275398 TGTTTTAGTTTAACTGTACCGAATCAT 57.725 29.630 8.00 0.00 0.00 2.45
5153 5595 8.550376 GTGTTTTAGTTTAACTGTACCGAATCA 58.450 33.333 8.00 0.00 0.00 2.57
5154 5596 8.011673 GGTGTTTTAGTTTAACTGTACCGAATC 58.988 37.037 8.00 0.00 0.00 2.52
5155 5597 7.864686 GGTGTTTTAGTTTAACTGTACCGAAT 58.135 34.615 8.00 0.00 0.00 3.34
5156 5598 7.245419 GGTGTTTTAGTTTAACTGTACCGAA 57.755 36.000 8.00 0.00 0.00 4.30
5157 5599 6.843069 GGTGTTTTAGTTTAACTGTACCGA 57.157 37.500 8.00 0.00 0.00 4.69
5158 5600 5.669122 CGGTGTTTTAGTTTAACTGTACCG 58.331 41.667 18.02 18.02 40.84 4.02
5159 5601 6.257630 TCACGGTGTTTTAGTTTAACTGTACC 59.742 38.462 8.00 7.68 0.00 3.34
5169 5611 3.312973 TGCGAATTCACGGTGTTTTAGTT 59.687 39.130 8.17 0.00 0.00 2.24
5173 5618 2.664424 CGATGCGAATTCACGGTGTTTT 60.664 45.455 8.17 3.19 0.00 2.43
5179 5624 2.560284 CATACGATGCGAATTCACGG 57.440 50.000 6.22 0.00 0.00 4.94
5198 5643 3.747099 ATTGTACGCATTGTCAAGAGC 57.253 42.857 3.36 3.36 0.00 4.09
5249 5797 8.231837 GGTACGTTTTCTTTTCACTATTATGCA 58.768 33.333 0.00 0.00 0.00 3.96
5253 5807 8.907222 AAGGGTACGTTTTCTTTTCACTATTA 57.093 30.769 0.00 0.00 29.37 0.98
5271 5825 4.961099 AGGTACAATGGTAGAGAAGGGTAC 59.039 45.833 0.00 0.00 0.00 3.34
5275 5829 4.344390 GGGTAGGTACAATGGTAGAGAAGG 59.656 50.000 0.00 0.00 0.00 3.46
5304 5858 9.764363 TGATCTACAAATGAACATCCTGTATAC 57.236 33.333 0.00 0.00 0.00 1.47
5309 5863 6.038936 TGCATGATCTACAAATGAACATCCTG 59.961 38.462 0.00 0.00 0.00 3.86
5332 5898 1.944709 GGGATTACCAATGTACCGTGC 59.055 52.381 0.00 0.00 39.85 5.34
5333 5899 2.206750 CGGGATTACCAATGTACCGTG 58.793 52.381 0.00 0.00 40.22 4.94
5354 5924 0.515564 CGGTTTGGCGAAAGTGGTAG 59.484 55.000 0.00 0.00 0.00 3.18
5385 5955 4.082125 AGGATGAAAGCGAACCTCAAATT 58.918 39.130 0.00 0.00 0.00 1.82
5409 5979 1.070821 TGTTCGAAGATGCTCGCTTG 58.929 50.000 0.00 0.00 38.73 4.01
5475 6324 8.542132 CACCAACTTTTAGAAAATGTTCACATG 58.458 33.333 0.00 0.00 36.56 3.21
5515 6364 9.939802 ACGTATTTTTAGAGAACCTTCACTTAT 57.060 29.630 0.00 0.00 30.73 1.73
5516 6365 9.199982 CACGTATTTTTAGAGAACCTTCACTTA 57.800 33.333 0.00 0.00 30.73 2.24
5517 6366 7.929785 TCACGTATTTTTAGAGAACCTTCACTT 59.070 33.333 0.00 0.00 30.73 3.16
5518 6367 7.439381 TCACGTATTTTTAGAGAACCTTCACT 58.561 34.615 0.00 0.00 32.83 3.41
5519 6368 7.647907 TCACGTATTTTTAGAGAACCTTCAC 57.352 36.000 0.00 0.00 0.00 3.18
5520 6369 7.711772 TGTTCACGTATTTTTAGAGAACCTTCA 59.288 33.333 7.03 0.00 35.59 3.02
5521 6370 8.080083 TGTTCACGTATTTTTAGAGAACCTTC 57.920 34.615 7.03 0.00 35.59 3.46
5522 6371 7.713942 ACTGTTCACGTATTTTTAGAGAACCTT 59.286 33.333 7.03 0.00 35.59 3.50
5523 6372 7.215085 ACTGTTCACGTATTTTTAGAGAACCT 58.785 34.615 7.03 0.00 35.59 3.50
5524 6373 7.417496 ACTGTTCACGTATTTTTAGAGAACC 57.583 36.000 7.03 0.00 35.59 3.62
5574 6424 6.963049 ACATTCTTTAGTTCACGATGTACC 57.037 37.500 0.00 0.00 0.00 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.