Multiple sequence alignment - TraesCS4A01G216300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G216300 chr4A 100.000 8186 0 0 1 8186 515008042 514999857 0.000000e+00 15117.0
1 TraesCS4A01G216300 chr4A 94.364 692 32 5 6430 7118 597816011 597816698 0.000000e+00 1055.0
2 TraesCS4A01G216300 chr4A 95.918 49 2 0 7416 7464 515000580 515000532 6.810000e-11 80.5
3 TraesCS4A01G216300 chr4A 95.918 49 2 0 7463 7511 515000627 515000579 6.810000e-11 80.5
4 TraesCS4A01G216300 chr4B 95.061 4070 122 23 483 4492 96942487 96938437 0.000000e+00 6329.0
5 TraesCS4A01G216300 chr4B 96.034 1538 31 13 5287 6815 96937374 96935858 0.000000e+00 2475.0
6 TraesCS4A01G216300 chr4B 96.059 812 20 2 4488 5287 96938352 96937541 0.000000e+00 1312.0
7 TraesCS4A01G216300 chr4B 95.572 542 19 3 6808 7345 96935112 96934572 0.000000e+00 863.0
8 TraesCS4A01G216300 chr4B 85.463 454 28 21 1 443 96942910 96942484 9.750000e-119 438.0
9 TraesCS4A01G216300 chr4B 95.238 42 2 0 7339 7380 96934268 96934227 5.300000e-07 67.6
10 TraesCS4A01G216300 chr4D 96.257 2351 75 9 746 3086 66322249 66319902 0.000000e+00 3842.0
11 TraesCS4A01G216300 chr4D 95.906 2052 57 12 5301 7345 66317567 66315536 0.000000e+00 3299.0
12 TraesCS4A01G216300 chr4D 94.759 1183 50 5 3284 4460 66319737 66318561 0.000000e+00 1831.0
13 TraesCS4A01G216300 chr4D 94.293 806 36 8 4488 5287 66318479 66317678 0.000000e+00 1225.0
14 TraesCS4A01G216300 chr4D 90.122 739 32 16 1 706 66322977 66322247 0.000000e+00 922.0
15 TraesCS4A01G216300 chr4D 91.480 223 15 4 7940 8159 66315415 66315194 3.710000e-78 303.0
16 TraesCS4A01G216300 chr2B 88.173 2156 222 30 951 3087 154244923 154247064 0.000000e+00 2538.0
17 TraesCS4A01G216300 chr2B 85.973 1269 132 32 5385 6639 154250824 154252060 0.000000e+00 1315.0
18 TraesCS4A01G216300 chr2B 94.729 702 30 5 6420 7118 772922228 772921531 0.000000e+00 1085.0
19 TraesCS4A01G216300 chr2B 94.587 702 30 6 6420 7118 263834034 263834730 0.000000e+00 1079.0
20 TraesCS4A01G216300 chr2B 84.700 1000 111 23 3510 4475 154248802 154249793 0.000000e+00 961.0
21 TraesCS4A01G216300 chr2B 82.920 726 94 18 4488 5194 154249896 154250610 1.940000e-175 627.0
22 TraesCS4A01G216300 chr2B 95.676 185 6 1 6152 6334 106851877 106852061 6.210000e-76 296.0
23 TraesCS4A01G216300 chr2B 91.228 114 7 3 3111 3224 792760540 792760650 1.420000e-32 152.0
24 TraesCS4A01G216300 chr2B 77.542 236 42 11 7884 8114 106958474 106958703 1.850000e-26 132.0
25 TraesCS4A01G216300 chr2B 100.000 51 0 0 6279 6329 263833986 263834036 2.430000e-15 95.3
26 TraesCS4A01G216300 chr2D 88.033 2156 224 31 951 3087 102867737 102869877 0.000000e+00 2521.0
27 TraesCS4A01G216300 chr2D 85.625 1273 136 30 5385 6639 102872238 102873481 0.000000e+00 1293.0
28 TraesCS4A01G216300 chr2D 82.205 1270 156 43 3244 4475 102869975 102871212 0.000000e+00 1029.0
29 TraesCS4A01G216300 chr2D 83.609 726 81 22 4490 5194 102871316 102872024 0.000000e+00 647.0
30 TraesCS4A01G216300 chr2D 94.175 103 6 0 3111 3213 12564949 12565051 3.060000e-34 158.0
31 TraesCS4A01G216300 chr2A 87.718 2182 235 28 925 3087 101905159 101907326 0.000000e+00 2514.0
32 TraesCS4A01G216300 chr2A 81.536 1966 253 74 3244 5136 101907424 101909352 0.000000e+00 1519.0
33 TraesCS4A01G216300 chr2A 85.310 1273 135 36 5385 6639 101909866 101911104 0.000000e+00 1267.0
34 TraesCS4A01G216300 chr2A 94.017 702 35 5 6420 7118 485201419 485202116 0.000000e+00 1057.0
35 TraesCS4A01G216300 chr2A 94.017 702 35 5 6420 7118 485221983 485222680 0.000000e+00 1057.0
36 TraesCS4A01G216300 chr2A 93.396 106 5 2 3114 3218 388733121 388733017 1.100000e-33 156.0
37 TraesCS4A01G216300 chr2A 91.071 112 8 2 3114 3224 588263107 588262997 5.120000e-32 150.0
38 TraesCS4A01G216300 chr2A 100.000 51 0 0 6279 6329 485221935 485221985 2.430000e-15 95.3
39 TraesCS4A01G216300 chr2A 100.000 51 0 0 6279 6329 687891505 687891555 2.430000e-15 95.3
40 TraesCS4A01G216300 chr6B 94.729 702 30 5 6420 7118 95971513 95972210 0.000000e+00 1085.0
41 TraesCS4A01G216300 chr6B 96.923 65 1 1 3908 3972 686923767 686923830 3.120000e-19 108.0
42 TraesCS4A01G216300 chr7B 93.059 706 41 6 6416 7118 697907750 697908450 0.000000e+00 1026.0
43 TraesCS4A01G216300 chr7B 88.649 185 6 2 6152 6334 697907578 697907749 2.310000e-50 211.0
44 TraesCS4A01G216300 chrUn 100.000 394 0 0 2245 2638 479413068 479413461 0.000000e+00 728.0
45 TraesCS4A01G216300 chr5B 94.175 103 6 0 3114 3216 515787837 515787735 3.060000e-34 158.0
46 TraesCS4A01G216300 chr1A 95.000 100 5 0 3114 3213 108688980 108688881 3.060000e-34 158.0
47 TraesCS4A01G216300 chr7A 88.710 124 11 2 3111 3232 496919338 496919460 1.840000e-31 148.0
48 TraesCS4A01G216300 chr6A 96.591 88 3 0 3111 3198 501647553 501647640 6.620000e-31 147.0
49 TraesCS4A01G216300 chr7D 83.448 145 14 3 4294 4430 218414557 218414415 8.620000e-25 126.0
50 TraesCS4A01G216300 chr5A 95.000 40 1 1 4382 4421 267892999 267892961 2.470000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G216300 chr4A 514999857 515008042 8185 True 15117.000000 15117 100.000000 1 8186 1 chr4A.!!$R1 8185
1 TraesCS4A01G216300 chr4A 597816011 597816698 687 False 1055.000000 1055 94.364000 6430 7118 1 chr4A.!!$F1 688
2 TraesCS4A01G216300 chr4B 96934227 96942910 8683 True 1914.100000 6329 93.904500 1 7380 6 chr4B.!!$R1 7379
3 TraesCS4A01G216300 chr4D 66315194 66322977 7783 True 1903.666667 3842 93.802833 1 8159 6 chr4D.!!$R1 8158
4 TraesCS4A01G216300 chr2B 154244923 154252060 7137 False 1360.250000 2538 85.441500 951 6639 4 chr2B.!!$F4 5688
5 TraesCS4A01G216300 chr2B 772921531 772922228 697 True 1085.000000 1085 94.729000 6420 7118 1 chr2B.!!$R1 698
6 TraesCS4A01G216300 chr2B 263833986 263834730 744 False 587.150000 1079 97.293500 6279 7118 2 chr2B.!!$F5 839
7 TraesCS4A01G216300 chr2D 102867737 102873481 5744 False 1372.500000 2521 84.868000 951 6639 4 chr2D.!!$F2 5688
8 TraesCS4A01G216300 chr2A 101905159 101911104 5945 False 1766.666667 2514 84.854667 925 6639 3 chr2A.!!$F3 5714
9 TraesCS4A01G216300 chr2A 485201419 485202116 697 False 1057.000000 1057 94.017000 6420 7118 1 chr2A.!!$F1 698
10 TraesCS4A01G216300 chr2A 485221935 485222680 745 False 576.150000 1057 97.008500 6279 7118 2 chr2A.!!$F4 839
11 TraesCS4A01G216300 chr6B 95971513 95972210 697 False 1085.000000 1085 94.729000 6420 7118 1 chr6B.!!$F1 698
12 TraesCS4A01G216300 chr7B 697907578 697908450 872 False 618.500000 1026 90.854000 6152 7118 2 chr7B.!!$F1 966

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
671 727 0.109597 GCAAGTGATTGCGGGAAGTG 60.110 55.000 0.00 0.00 38.26 3.16 F
760 819 1.092348 CGGTGGCTTAGGGTTTTAGC 58.908 55.000 0.00 0.00 0.00 3.09 F
1704 1770 1.167851 CCACCATGTCGAATGCAACT 58.832 50.000 0.00 0.00 0.00 3.16 F
3131 3241 1.078918 CCATGAGTTGGCTGCGAGA 60.079 57.895 0.00 0.00 39.09 4.04 F
4218 5807 0.809241 CTAGCTTGCTGGGCTCTTCG 60.809 60.000 5.26 0.00 40.74 3.79 F
4485 6077 6.358118 TGTACATTTTCATCAGTTATCGCC 57.642 37.500 0.00 0.00 0.00 5.54 F
5256 7248 2.168313 TCAGTACATCGTCCATGCATGT 59.832 45.455 24.58 8.96 35.65 3.21 F
6144 8321 2.154462 GCTGAGGTGCATACTTGTTGT 58.846 47.619 0.00 0.00 0.00 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1686 1752 1.805943 TCAGTTGCATTCGACATGGTG 59.194 47.619 0.00 0.00 0.00 4.17 R
2110 2177 2.851263 CCAGCAGGTGGTAAACTACA 57.149 50.000 10.82 0.00 42.17 2.74 R
3207 3323 0.659427 CCGTGCATGATCATCACCAC 59.341 55.000 21.98 18.94 32.15 4.16 R
4725 6429 1.754234 GGTGGGCATGGCTTCGAAT 60.754 57.895 19.78 0.00 0.00 3.34 R
5188 7180 2.093816 TCTGGAGAGCTGTGCTAATGTG 60.094 50.000 3.55 0.00 39.88 3.21 R
5398 7560 3.947834 GGTTCTTCAATACCCATGTCCTG 59.052 47.826 0.00 0.00 0.00 3.86 R
7118 10060 0.034896 ACTCGCCGATCCAAACTTGT 59.965 50.000 0.00 0.00 0.00 3.16 R
7449 10703 0.320374 TGTAACCGGTGAAGGAGCTG 59.680 55.000 8.52 0.00 34.73 4.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
154 176 2.721167 CCCCGTCATCAGAAGGCGA 61.721 63.158 0.15 0.00 41.46 5.54
382 418 2.182537 CGTAGGACCCGTTTCCCG 59.817 66.667 0.00 0.00 36.12 5.14
411 447 2.747855 CCCAGGCCGAGCTGTTTC 60.748 66.667 0.00 0.00 0.00 2.78
552 588 1.721093 TTGAACCCCATTCCCCACGT 61.721 55.000 0.00 0.00 36.36 4.49
566 602 1.933853 CCCACGTTATGTAGCTTGCTC 59.066 52.381 0.00 0.00 0.00 4.26
577 613 0.596083 AGCTTGCTCGGATCGATTCG 60.596 55.000 20.33 20.33 34.61 3.34
621 677 9.635404 TTTTCTCTGGTAGTTCTTTAAATTGGA 57.365 29.630 0.00 0.00 0.00 3.53
622 678 8.848474 TTCTCTGGTAGTTCTTTAAATTGGAG 57.152 34.615 0.00 0.00 0.00 3.86
671 727 0.109597 GCAAGTGATTGCGGGAAGTG 60.110 55.000 0.00 0.00 38.26 3.16
728 787 6.073548 GGCATCAATTACCGAAAGATAGTCTG 60.074 42.308 0.00 0.00 0.00 3.51
742 801 5.352284 AGATAGTCTGATTTTGGTACTGCG 58.648 41.667 0.00 0.00 0.00 5.18
760 819 1.092348 CGGTGGCTTAGGGTTTTAGC 58.908 55.000 0.00 0.00 0.00 3.09
809 874 1.636148 ATGTTGCAAGTTGGCCATCT 58.364 45.000 6.09 8.83 0.00 2.90
823 888 2.349590 GCCATCTTTTGCCAAATCCAC 58.650 47.619 0.00 0.00 0.00 4.02
858 923 8.264347 TGATATGTTAAGCTGTAATTCCAGTCA 58.736 33.333 0.00 0.00 34.84 3.41
882 947 3.207669 GCTGCTCCTGCCCATTCG 61.208 66.667 0.00 0.00 38.71 3.34
907 972 7.307160 CGTGTCTGCAAGTAATGTCTTCTTTTA 60.307 37.037 0.00 0.00 33.76 1.52
1276 1342 1.608717 CCCCTTCCAGACTGTCTCGG 61.609 65.000 7.49 12.73 0.00 4.63
1291 1357 4.069232 CGGTCGCCTGCTTGGAGA 62.069 66.667 0.49 0.00 42.42 3.71
1554 1620 2.373502 GGCAATGCTCTATAGGGGTTCT 59.626 50.000 4.82 0.00 0.00 3.01
1686 1752 4.074970 TCAAGATGGTCTTTCTTTCTGCC 58.925 43.478 0.00 0.00 33.78 4.85
1704 1770 1.167851 CCACCATGTCGAATGCAACT 58.832 50.000 0.00 0.00 0.00 3.16
2052 2118 5.893255 AGATAAATTCTGGCCTTATTGTGCA 59.107 36.000 3.32 0.00 31.79 4.57
2110 2177 8.830201 TTTCTTGTACAAGCATGCATATTTTT 57.170 26.923 27.49 0.36 38.28 1.94
2153 2220 6.140786 GCTTTTAAAACTAGGGAACAGTTCG 58.859 40.000 7.22 0.00 35.19 3.95
2646 2724 6.040054 TCCATTGACTGCATAATCTGGAATTG 59.960 38.462 5.30 0.00 0.00 2.32
2660 2738 4.844085 TCTGGAATTGTACTCCTCAAAGGA 59.156 41.667 0.00 0.00 43.43 3.36
3131 3241 1.078918 CCATGAGTTGGCTGCGAGA 60.079 57.895 0.00 0.00 39.09 4.04
3198 3308 3.951775 AGGCTTTGTTGTTGTTGTTGA 57.048 38.095 0.00 0.00 0.00 3.18
3201 3317 4.081752 AGGCTTTGTTGTTGTTGTTGATGA 60.082 37.500 0.00 0.00 0.00 2.92
3207 3323 5.530712 TGTTGTTGTTGTTGATGATGATGG 58.469 37.500 0.00 0.00 0.00 3.51
3210 3326 4.022155 TGTTGTTGTTGATGATGATGGTGG 60.022 41.667 0.00 0.00 0.00 4.61
3231 3347 3.814842 GGTGATGATCATGCACGGAATTA 59.185 43.478 14.30 0.00 33.48 1.40
3236 3352 7.545615 GTGATGATCATGCACGGAATTAGTATA 59.454 37.037 14.30 0.00 0.00 1.47
3533 5090 6.694447 ACTTTGCATTTGAAAGATACATGCT 58.306 32.000 2.16 0.00 34.94 3.79
3600 5162 1.202604 TGTTGAAGTCGTCCTCCCAAC 60.203 52.381 0.00 0.00 37.26 3.77
3759 5326 4.702612 TCCTGCAAGACACTTGTTTTGTTA 59.297 37.500 12.67 4.01 40.83 2.41
3803 5388 8.742777 TGCTTTTCAAGATCTATTTTGTATGCT 58.257 29.630 0.00 0.00 0.00 3.79
3886 5471 3.964031 AGTTTGACATTTGGCCTTTGGTA 59.036 39.130 3.32 0.00 0.00 3.25
4218 5807 0.809241 CTAGCTTGCTGGGCTCTTCG 60.809 60.000 5.26 0.00 40.74 3.79
4325 5915 9.529325 AATGATCTTGCTGAATATCACAAATTG 57.471 29.630 0.00 0.00 30.00 2.32
4485 6077 6.358118 TGTACATTTTCATCAGTTATCGCC 57.642 37.500 0.00 0.00 0.00 5.54
5256 7248 2.168313 TCAGTACATCGTCCATGCATGT 59.832 45.455 24.58 8.96 35.65 3.21
5265 7257 5.213891 TCGTCCATGCATGTTATACAGAT 57.786 39.130 24.58 0.00 0.00 2.90
5287 7279 3.704061 TGGGGAAAACAAATGCTATAGCC 59.296 43.478 21.84 4.84 41.18 3.93
5289 7281 3.243401 GGGAAAACAAATGCTATAGCCCG 60.243 47.826 21.84 9.80 41.18 6.13
5290 7282 3.372060 GAAAACAAATGCTATAGCCCGC 58.628 45.455 21.84 0.00 41.18 6.13
5551 7713 5.009010 CAGTCCTGTTTTTACTTGATGCACT 59.991 40.000 0.00 0.00 0.00 4.40
5552 7714 5.594317 AGTCCTGTTTTTACTTGATGCACTT 59.406 36.000 0.00 0.00 0.00 3.16
5553 7715 6.770785 AGTCCTGTTTTTACTTGATGCACTTA 59.229 34.615 0.00 0.00 0.00 2.24
5554 7716 7.448469 AGTCCTGTTTTTACTTGATGCACTTAT 59.552 33.333 0.00 0.00 0.00 1.73
5555 7717 8.082242 GTCCTGTTTTTACTTGATGCACTTATT 58.918 33.333 0.00 0.00 0.00 1.40
5888 8057 3.391965 GGATGAGCTGCTTATCACTGAG 58.608 50.000 28.46 0.00 29.58 3.35
6141 8318 4.494091 AATAGCTGAGGTGCATACTTGT 57.506 40.909 0.00 0.00 34.99 3.16
6142 8319 2.867109 AGCTGAGGTGCATACTTGTT 57.133 45.000 0.00 0.00 34.99 2.83
6143 8320 2.430465 AGCTGAGGTGCATACTTGTTG 58.570 47.619 0.00 0.00 34.99 3.33
6144 8321 2.154462 GCTGAGGTGCATACTTGTTGT 58.846 47.619 0.00 0.00 0.00 3.32
6145 8322 3.007940 AGCTGAGGTGCATACTTGTTGTA 59.992 43.478 0.00 0.00 35.37 2.41
6146 8323 3.941483 GCTGAGGTGCATACTTGTTGTAT 59.059 43.478 0.00 0.00 42.18 2.29
6147 8324 5.104941 AGCTGAGGTGCATACTTGTTGTATA 60.105 40.000 0.00 0.00 39.66 1.47
6148 8325 5.006746 GCTGAGGTGCATACTTGTTGTATAC 59.993 44.000 0.00 0.00 39.66 1.47
6673 8855 3.874392 TCCGGGCACTAGTACTAAAAC 57.126 47.619 0.00 0.00 0.00 2.43
6806 8990 4.345257 ACAAGTGTGACATGTCCTTCTAGT 59.655 41.667 22.85 11.93 0.00 2.57
6853 9790 7.445096 ACATTTATTCTCAACTGTGACATGACA 59.555 33.333 0.00 0.00 0.00 3.58
6883 9821 4.948341 TGAACAAGTTGGACTGTAGCTA 57.052 40.909 7.96 0.00 0.00 3.32
6949 9888 3.614092 AGAAGTTGTGATTGGCATCGAT 58.386 40.909 0.00 0.00 31.08 3.59
6990 9932 3.491342 TGCATGCCCAACACTACTTTTA 58.509 40.909 16.68 0.00 0.00 1.52
7066 10008 7.789273 TTGTCGAACCAACTGACTTAATTTA 57.211 32.000 0.00 0.00 33.81 1.40
7372 10626 4.895224 TGCATTCAATTTTGCAGCAAAA 57.105 31.818 30.64 30.64 45.41 2.44
7382 10636 4.679373 TTTGCAGCAAAATTGTTAGGGA 57.321 36.364 18.52 0.00 29.89 4.20
7383 10637 4.679373 TTGCAGCAAAATTGTTAGGGAA 57.321 36.364 4.99 0.00 0.00 3.97
7384 10638 4.679373 TGCAGCAAAATTGTTAGGGAAA 57.321 36.364 0.00 0.00 0.00 3.13
7385 10639 5.226194 TGCAGCAAAATTGTTAGGGAAAT 57.774 34.783 0.00 0.00 0.00 2.17
7386 10640 5.237048 TGCAGCAAAATTGTTAGGGAAATC 58.763 37.500 0.00 0.00 0.00 2.17
7387 10641 4.631377 GCAGCAAAATTGTTAGGGAAATCC 59.369 41.667 0.00 0.00 0.00 3.01
7389 10643 6.350949 GCAGCAAAATTGTTAGGGAAATCCTA 60.351 38.462 0.00 0.00 45.98 2.94
7390 10644 7.633553 GCAGCAAAATTGTTAGGGAAATCCTAT 60.634 37.037 0.00 0.00 46.76 2.57
7391 10645 8.260114 CAGCAAAATTGTTAGGGAAATCCTATT 58.740 33.333 0.00 0.00 46.76 1.73
7392 10646 8.825774 AGCAAAATTGTTAGGGAAATCCTATTT 58.174 29.630 0.00 0.00 46.76 1.40
7396 10650 7.745620 ATTGTTAGGGAAATCCTATTTAGCG 57.254 36.000 0.00 0.00 46.76 4.26
7397 10651 6.243216 TGTTAGGGAAATCCTATTTAGCGT 57.757 37.500 0.00 0.00 46.76 5.07
7398 10652 6.285990 TGTTAGGGAAATCCTATTTAGCGTC 58.714 40.000 0.00 0.00 46.76 5.19
7399 10653 6.099269 TGTTAGGGAAATCCTATTTAGCGTCT 59.901 38.462 0.00 0.00 46.76 4.18
7400 10654 4.962155 AGGGAAATCCTATTTAGCGTCTG 58.038 43.478 0.00 0.00 45.98 3.51
7401 10655 4.065789 GGGAAATCCTATTTAGCGTCTGG 58.934 47.826 0.00 0.00 35.95 3.86
7402 10656 3.498777 GGAAATCCTATTTAGCGTCTGGC 59.501 47.826 0.00 0.00 44.05 4.85
7420 10674 3.497031 GCTTCAGGCGCGGGTTAC 61.497 66.667 8.83 0.00 0.00 2.50
7421 10675 2.047655 CTTCAGGCGCGGGTTACA 60.048 61.111 8.83 0.00 0.00 2.41
7422 10676 2.047655 TTCAGGCGCGGGTTACAG 60.048 61.111 8.83 0.00 0.00 2.74
7423 10677 3.599285 TTCAGGCGCGGGTTACAGG 62.599 63.158 8.83 0.00 0.00 4.00
7424 10678 4.388499 CAGGCGCGGGTTACAGGT 62.388 66.667 8.83 0.00 0.00 4.00
7425 10679 4.388499 AGGCGCGGGTTACAGGTG 62.388 66.667 8.83 0.00 0.00 4.00
7426 10680 4.692475 GGCGCGGGTTACAGGTGT 62.692 66.667 8.83 0.00 0.00 4.16
7427 10681 2.667199 GCGCGGGTTACAGGTGTT 60.667 61.111 8.83 0.00 0.00 3.32
7428 10682 2.255881 GCGCGGGTTACAGGTGTTT 61.256 57.895 8.83 0.00 0.00 2.83
7429 10683 1.788067 GCGCGGGTTACAGGTGTTTT 61.788 55.000 8.83 0.00 0.00 2.43
7430 10684 0.664224 CGCGGGTTACAGGTGTTTTT 59.336 50.000 0.00 0.00 0.00 1.94
7431 10685 1.872313 CGCGGGTTACAGGTGTTTTTA 59.128 47.619 0.00 0.00 0.00 1.52
7432 10686 2.349722 CGCGGGTTACAGGTGTTTTTAC 60.350 50.000 0.00 0.00 0.00 2.01
7433 10687 2.617774 GCGGGTTACAGGTGTTTTTACA 59.382 45.455 0.00 0.00 0.00 2.41
7434 10688 3.066481 GCGGGTTACAGGTGTTTTTACAA 59.934 43.478 0.00 0.00 0.00 2.41
7435 10689 4.439837 GCGGGTTACAGGTGTTTTTACAAA 60.440 41.667 0.00 0.00 0.00 2.83
7436 10690 5.036090 CGGGTTACAGGTGTTTTTACAAAC 58.964 41.667 0.00 0.00 42.49 2.93
7437 10691 5.163632 CGGGTTACAGGTGTTTTTACAAACT 60.164 40.000 6.10 0.00 42.61 2.66
7438 10692 6.037726 GGGTTACAGGTGTTTTTACAAACTG 58.962 40.000 6.10 0.00 42.61 3.16
7439 10693 6.037726 GGTTACAGGTGTTTTTACAAACTGG 58.962 40.000 6.10 0.00 42.61 4.00
7440 10694 4.118093 ACAGGTGTTTTTACAAACTGGC 57.882 40.909 6.10 0.00 42.61 4.85
7441 10695 3.112580 CAGGTGTTTTTACAAACTGGCG 58.887 45.455 6.10 0.00 42.61 5.69
7442 10696 1.855978 GGTGTTTTTACAAACTGGCGC 59.144 47.619 0.00 0.00 42.61 6.53
7443 10697 1.855978 GTGTTTTTACAAACTGGCGCC 59.144 47.619 22.73 22.73 42.61 6.53
7444 10698 1.751924 TGTTTTTACAAACTGGCGCCT 59.248 42.857 29.70 8.67 42.61 5.52
7445 10699 2.124122 GTTTTTACAAACTGGCGCCTG 58.876 47.619 29.48 29.48 39.49 4.85
7446 10700 1.681538 TTTTACAAACTGGCGCCTGA 58.318 45.000 36.36 13.69 0.00 3.86
7447 10701 1.681538 TTTACAAACTGGCGCCTGAA 58.318 45.000 36.36 18.73 0.00 3.02
7448 10702 1.234821 TTACAAACTGGCGCCTGAAG 58.765 50.000 36.36 23.99 0.00 3.02
7449 10703 1.234615 TACAAACTGGCGCCTGAAGC 61.235 55.000 36.36 6.20 38.52 3.86
7450 10704 2.203337 AAACTGGCGCCTGAAGCA 60.203 55.556 36.36 11.23 44.04 3.91
7451 10705 2.263741 AAACTGGCGCCTGAAGCAG 61.264 57.895 36.36 22.51 44.04 4.24
7456 10710 4.774503 GCGCCTGAAGCAGCTCCT 62.775 66.667 0.00 0.00 44.04 3.69
7457 10711 2.046507 CGCCTGAAGCAGCTCCTT 60.047 61.111 0.00 0.00 44.04 3.36
7458 10712 2.105466 CGCCTGAAGCAGCTCCTTC 61.105 63.158 10.67 10.67 44.04 3.46
7459 10713 1.002868 GCCTGAAGCAGCTCCTTCA 60.003 57.895 18.94 18.94 46.48 3.02
7460 10714 1.304509 GCCTGAAGCAGCTCCTTCAC 61.305 60.000 16.29 4.15 44.49 3.18
7461 10715 0.676151 CCTGAAGCAGCTCCTTCACC 60.676 60.000 16.29 0.00 44.49 4.02
7462 10716 1.004560 TGAAGCAGCTCCTTCACCG 60.005 57.895 16.29 0.00 44.49 4.94
7463 10717 1.743252 GAAGCAGCTCCTTCACCGG 60.743 63.158 12.71 0.00 40.67 5.28
7464 10718 2.456287 GAAGCAGCTCCTTCACCGGT 62.456 60.000 12.71 0.00 40.67 5.28
7465 10719 2.032681 GCAGCTCCTTCACCGGTT 59.967 61.111 2.97 0.00 0.00 4.44
7466 10720 1.192146 AGCAGCTCCTTCACCGGTTA 61.192 55.000 2.97 0.00 0.00 2.85
7467 10721 1.019805 GCAGCTCCTTCACCGGTTAC 61.020 60.000 2.97 0.00 0.00 2.50
7468 10722 0.320374 CAGCTCCTTCACCGGTTACA 59.680 55.000 2.97 0.00 0.00 2.41
7469 10723 1.053424 AGCTCCTTCACCGGTTACAA 58.947 50.000 2.97 0.00 0.00 2.41
7470 10724 1.002087 AGCTCCTTCACCGGTTACAAG 59.998 52.381 2.97 7.59 0.00 3.16
7471 10725 1.270678 GCTCCTTCACCGGTTACAAGT 60.271 52.381 2.97 0.00 0.00 3.16
7472 10726 2.413837 CTCCTTCACCGGTTACAAGTG 58.586 52.381 2.97 2.47 0.00 3.16
7473 10727 1.764134 TCCTTCACCGGTTACAAGTGT 59.236 47.619 2.97 0.00 33.21 3.55
7474 10728 2.171027 TCCTTCACCGGTTACAAGTGTT 59.829 45.455 2.97 0.00 33.21 3.32
7475 10729 2.946990 CCTTCACCGGTTACAAGTGTTT 59.053 45.455 2.97 0.00 33.21 2.83
7476 10730 3.379057 CCTTCACCGGTTACAAGTGTTTT 59.621 43.478 2.97 0.00 33.21 2.43
7477 10731 4.142337 CCTTCACCGGTTACAAGTGTTTTT 60.142 41.667 2.97 0.00 33.21 1.94
7478 10732 5.066246 CCTTCACCGGTTACAAGTGTTTTTA 59.934 40.000 2.97 0.00 33.21 1.52
7479 10733 5.482686 TCACCGGTTACAAGTGTTTTTAC 57.517 39.130 2.97 0.00 33.21 2.01
7480 10734 4.940046 TCACCGGTTACAAGTGTTTTTACA 59.060 37.500 2.97 0.00 33.21 2.41
7481 10735 5.413833 TCACCGGTTACAAGTGTTTTTACAA 59.586 36.000 2.97 0.00 33.21 2.41
7482 10736 6.072286 TCACCGGTTACAAGTGTTTTTACAAA 60.072 34.615 2.97 0.00 33.21 2.83
7483 10737 6.033725 CACCGGTTACAAGTGTTTTTACAAAC 59.966 38.462 2.97 0.00 42.49 2.93
7484 10738 6.072008 ACCGGTTACAAGTGTTTTTACAAACT 60.072 34.615 0.00 0.00 42.61 2.66
7485 10739 6.251801 CCGGTTACAAGTGTTTTTACAAACTG 59.748 38.462 6.10 0.00 42.61 3.16
7486 10740 6.251801 CGGTTACAAGTGTTTTTACAAACTGG 59.748 38.462 6.10 0.00 42.61 4.00
7487 10741 6.035220 GGTTACAAGTGTTTTTACAAACTGGC 59.965 38.462 6.10 0.00 42.61 4.85
7488 10742 4.170256 ACAAGTGTTTTTACAAACTGGCG 58.830 39.130 6.10 0.00 42.61 5.69
7489 10743 2.804647 AGTGTTTTTACAAACTGGCGC 58.195 42.857 0.00 0.00 42.61 6.53
7490 10744 1.855978 GTGTTTTTACAAACTGGCGCC 59.144 47.619 22.73 22.73 42.61 6.53
7491 10745 1.751924 TGTTTTTACAAACTGGCGCCT 59.248 42.857 29.70 8.67 42.61 5.52
7492 10746 2.124122 GTTTTTACAAACTGGCGCCTG 58.876 47.619 29.48 29.48 39.49 4.85
7493 10747 1.681538 TTTTACAAACTGGCGCCTGA 58.318 45.000 36.36 13.69 0.00 3.86
7494 10748 1.681538 TTTACAAACTGGCGCCTGAA 58.318 45.000 36.36 18.73 0.00 3.02
7495 10749 1.234821 TTACAAACTGGCGCCTGAAG 58.765 50.000 36.36 23.99 0.00 3.02
7496 10750 1.234615 TACAAACTGGCGCCTGAAGC 61.235 55.000 36.36 6.20 38.52 3.86
7497 10751 2.203337 AAACTGGCGCCTGAAGCA 60.203 55.556 36.36 11.23 44.04 3.91
7498 10752 2.263741 AAACTGGCGCCTGAAGCAG 61.264 57.895 36.36 22.51 44.04 4.24
7503 10757 4.774503 GCGCCTGAAGCAGCTCCT 62.775 66.667 0.00 0.00 44.04 3.69
7504 10758 2.046507 CGCCTGAAGCAGCTCCTT 60.047 61.111 0.00 0.00 44.04 3.36
7505 10759 2.105466 CGCCTGAAGCAGCTCCTTC 61.105 63.158 10.67 10.67 44.04 3.46
7506 10760 1.002868 GCCTGAAGCAGCTCCTTCA 60.003 57.895 18.94 18.94 46.48 3.02
7507 10761 1.304509 GCCTGAAGCAGCTCCTTCAC 61.305 60.000 16.29 4.15 44.49 3.18
7508 10762 1.018226 CCTGAAGCAGCTCCTTCACG 61.018 60.000 16.29 8.88 44.49 4.35
7509 10763 1.004560 TGAAGCAGCTCCTTCACGG 60.005 57.895 16.29 0.00 44.49 4.94
7510 10764 1.743252 GAAGCAGCTCCTTCACGGG 60.743 63.158 12.71 0.00 40.67 5.28
7511 10765 3.259633 AAGCAGCTCCTTCACGGGG 62.260 63.158 0.00 0.00 35.81 5.73
7512 10766 3.706373 GCAGCTCCTTCACGGGGA 61.706 66.667 0.00 0.00 33.87 4.81
7517 10771 1.376037 CTCCTTCACGGGGAGTTGC 60.376 63.158 0.00 0.00 43.77 4.17
7518 10772 2.111999 CTCCTTCACGGGGAGTTGCA 62.112 60.000 0.00 0.00 43.77 4.08
7519 10773 1.228124 CCTTCACGGGGAGTTGCAA 60.228 57.895 0.00 0.00 0.00 4.08
7520 10774 0.609131 CCTTCACGGGGAGTTGCAAT 60.609 55.000 0.59 0.00 0.00 3.56
7521 10775 1.339631 CCTTCACGGGGAGTTGCAATA 60.340 52.381 0.59 0.00 0.00 1.90
7522 10776 2.432444 CTTCACGGGGAGTTGCAATAA 58.568 47.619 0.59 0.00 0.00 1.40
7523 10777 1.816074 TCACGGGGAGTTGCAATAAC 58.184 50.000 0.59 0.00 0.00 1.89
7524 10778 0.446222 CACGGGGAGTTGCAATAACG 59.554 55.000 0.59 6.43 0.00 3.18
7525 10779 0.675522 ACGGGGAGTTGCAATAACGG 60.676 55.000 0.59 1.17 0.00 4.44
7526 10780 1.807226 GGGGAGTTGCAATAACGGC 59.193 57.895 0.59 0.00 0.00 5.68
7527 10781 1.663379 GGGGAGTTGCAATAACGGCC 61.663 60.000 0.59 0.00 0.00 6.13
7528 10782 0.679960 GGGAGTTGCAATAACGGCCT 60.680 55.000 0.59 0.00 0.00 5.19
7529 10783 0.451783 GGAGTTGCAATAACGGCCTG 59.548 55.000 0.59 0.00 0.00 4.85
7530 10784 0.451783 GAGTTGCAATAACGGCCTGG 59.548 55.000 0.59 0.00 0.00 4.45
7531 10785 0.965363 AGTTGCAATAACGGCCTGGG 60.965 55.000 0.59 0.00 0.00 4.45
7532 10786 1.680651 TTGCAATAACGGCCTGGGG 60.681 57.895 0.00 0.00 0.00 4.96
7546 10800 3.030652 GGGGCAACACACGACTTG 58.969 61.111 0.00 0.00 42.67 3.16
7547 10801 1.822186 GGGGCAACACACGACTTGT 60.822 57.895 0.00 0.00 42.67 3.16
7559 10813 4.694012 CACGACTTGTGTTCAGTTACTC 57.306 45.455 0.00 0.00 43.88 2.59
7560 10814 3.489785 CACGACTTGTGTTCAGTTACTCC 59.510 47.826 0.00 0.00 43.88 3.85
7561 10815 3.057734 CGACTTGTGTTCAGTTACTCCC 58.942 50.000 0.00 0.00 0.00 4.30
7562 10816 3.491964 CGACTTGTGTTCAGTTACTCCCA 60.492 47.826 0.00 0.00 0.00 4.37
7563 10817 4.642429 GACTTGTGTTCAGTTACTCCCAT 58.358 43.478 0.00 0.00 0.00 4.00
7564 10818 5.048846 ACTTGTGTTCAGTTACTCCCATT 57.951 39.130 0.00 0.00 0.00 3.16
7565 10819 5.445964 ACTTGTGTTCAGTTACTCCCATTT 58.554 37.500 0.00 0.00 0.00 2.32
7566 10820 5.531287 ACTTGTGTTCAGTTACTCCCATTTC 59.469 40.000 0.00 0.00 0.00 2.17
7567 10821 4.394729 TGTGTTCAGTTACTCCCATTTCC 58.605 43.478 0.00 0.00 0.00 3.13
7568 10822 3.756963 GTGTTCAGTTACTCCCATTTCCC 59.243 47.826 0.00 0.00 0.00 3.97
7569 10823 3.245122 TGTTCAGTTACTCCCATTTCCCC 60.245 47.826 0.00 0.00 0.00 4.81
7570 10824 2.638325 TCAGTTACTCCCATTTCCCCA 58.362 47.619 0.00 0.00 0.00 4.96
7571 10825 3.197983 TCAGTTACTCCCATTTCCCCAT 58.802 45.455 0.00 0.00 0.00 4.00
7572 10826 3.596046 TCAGTTACTCCCATTTCCCCATT 59.404 43.478 0.00 0.00 0.00 3.16
7573 10827 3.954258 CAGTTACTCCCATTTCCCCATTC 59.046 47.826 0.00 0.00 0.00 2.67
7574 10828 3.858638 AGTTACTCCCATTTCCCCATTCT 59.141 43.478 0.00 0.00 0.00 2.40
7575 10829 2.834638 ACTCCCATTTCCCCATTCTG 57.165 50.000 0.00 0.00 0.00 3.02
7576 10830 2.003072 ACTCCCATTTCCCCATTCTGT 58.997 47.619 0.00 0.00 0.00 3.41
7577 10831 2.383338 ACTCCCATTTCCCCATTCTGTT 59.617 45.455 0.00 0.00 0.00 3.16
7578 10832 3.026694 CTCCCATTTCCCCATTCTGTTC 58.973 50.000 0.00 0.00 0.00 3.18
7579 10833 2.654385 TCCCATTTCCCCATTCTGTTCT 59.346 45.455 0.00 0.00 0.00 3.01
7580 10834 3.077391 TCCCATTTCCCCATTCTGTTCTT 59.923 43.478 0.00 0.00 0.00 2.52
7581 10835 3.840078 CCCATTTCCCCATTCTGTTCTTT 59.160 43.478 0.00 0.00 0.00 2.52
7582 10836 4.081476 CCCATTTCCCCATTCTGTTCTTTC 60.081 45.833 0.00 0.00 0.00 2.62
7583 10837 4.081476 CCATTTCCCCATTCTGTTCTTTCC 60.081 45.833 0.00 0.00 0.00 3.13
7584 10838 4.469469 TTTCCCCATTCTGTTCTTTCCT 57.531 40.909 0.00 0.00 0.00 3.36
7585 10839 4.469469 TTCCCCATTCTGTTCTTTCCTT 57.531 40.909 0.00 0.00 0.00 3.36
7586 10840 4.469469 TCCCCATTCTGTTCTTTCCTTT 57.531 40.909 0.00 0.00 0.00 3.11
7587 10841 4.814967 TCCCCATTCTGTTCTTTCCTTTT 58.185 39.130 0.00 0.00 0.00 2.27
7588 10842 5.215845 TCCCCATTCTGTTCTTTCCTTTTT 58.784 37.500 0.00 0.00 0.00 1.94
7589 10843 5.304357 TCCCCATTCTGTTCTTTCCTTTTTC 59.696 40.000 0.00 0.00 0.00 2.29
7590 10844 5.305386 CCCCATTCTGTTCTTTCCTTTTTCT 59.695 40.000 0.00 0.00 0.00 2.52
7591 10845 6.183361 CCCCATTCTGTTCTTTCCTTTTTCTT 60.183 38.462 0.00 0.00 0.00 2.52
7592 10846 7.275183 CCCATTCTGTTCTTTCCTTTTTCTTT 58.725 34.615 0.00 0.00 0.00 2.52
7593 10847 7.770433 CCCATTCTGTTCTTTCCTTTTTCTTTT 59.230 33.333 0.00 0.00 0.00 2.27
7594 10848 8.820933 CCATTCTGTTCTTTCCTTTTTCTTTTC 58.179 33.333 0.00 0.00 0.00 2.29
7595 10849 9.591792 CATTCTGTTCTTTCCTTTTTCTTTTCT 57.408 29.630 0.00 0.00 0.00 2.52
7596 10850 9.809096 ATTCTGTTCTTTCCTTTTTCTTTTCTC 57.191 29.630 0.00 0.00 0.00 2.87
7597 10851 8.581253 TCTGTTCTTTCCTTTTTCTTTTCTCT 57.419 30.769 0.00 0.00 0.00 3.10
7598 10852 9.025041 TCTGTTCTTTCCTTTTTCTTTTCTCTT 57.975 29.630 0.00 0.00 0.00 2.85
7599 10853 9.645059 CTGTTCTTTCCTTTTTCTTTTCTCTTT 57.355 29.630 0.00 0.00 0.00 2.52
7600 10854 9.639601 TGTTCTTTCCTTTTTCTTTTCTCTTTC 57.360 29.630 0.00 0.00 0.00 2.62
7601 10855 9.862371 GTTCTTTCCTTTTTCTTTTCTCTTTCT 57.138 29.630 0.00 0.00 0.00 2.52
7603 10857 9.860898 TCTTTCCTTTTTCTTTTCTCTTTCTTG 57.139 29.630 0.00 0.00 0.00 3.02
7604 10858 9.645059 CTTTCCTTTTTCTTTTCTCTTTCTTGT 57.355 29.630 0.00 0.00 0.00 3.16
7605 10859 9.996554 TTTCCTTTTTCTTTTCTCTTTCTTGTT 57.003 25.926 0.00 0.00 0.00 2.83
7606 10860 9.996554 TTCCTTTTTCTTTTCTCTTTCTTGTTT 57.003 25.926 0.00 0.00 0.00 2.83
7607 10861 9.423061 TCCTTTTTCTTTTCTCTTTCTTGTTTG 57.577 29.630 0.00 0.00 0.00 2.93
7608 10862 9.208022 CCTTTTTCTTTTCTCTTTCTTGTTTGT 57.792 29.630 0.00 0.00 0.00 2.83
7640 10894 9.481800 CAGTTTTTCTTTCTTTTTCAAAGATGC 57.518 29.630 0.00 0.00 39.16 3.91
7641 10895 9.218440 AGTTTTTCTTTCTTTTTCAAAGATGCA 57.782 25.926 0.00 0.00 39.16 3.96
7642 10896 9.265938 GTTTTTCTTTCTTTTTCAAAGATGCAC 57.734 29.630 0.00 0.00 39.16 4.57
7643 10897 8.545229 TTTTCTTTCTTTTTCAAAGATGCACA 57.455 26.923 0.00 0.00 39.16 4.57
7644 10898 8.545229 TTTCTTTCTTTTTCAAAGATGCACAA 57.455 26.923 0.00 0.00 39.16 3.33
7645 10899 8.545229 TTCTTTCTTTTTCAAAGATGCACAAA 57.455 26.923 0.00 0.00 39.16 2.83
7646 10900 7.962917 TCTTTCTTTTTCAAAGATGCACAAAC 58.037 30.769 0.00 0.00 35.40 2.93
7647 10901 7.818930 TCTTTCTTTTTCAAAGATGCACAAACT 59.181 29.630 0.00 0.00 35.40 2.66
7648 10902 7.903995 TTCTTTTTCAAAGATGCACAAACTT 57.096 28.000 0.00 0.00 0.00 2.66
7649 10903 7.903995 TCTTTTTCAAAGATGCACAAACTTT 57.096 28.000 0.00 0.00 34.77 2.66
7650 10904 8.321650 TCTTTTTCAAAGATGCACAAACTTTT 57.678 26.923 0.00 0.00 32.59 2.27
7651 10905 8.782144 TCTTTTTCAAAGATGCACAAACTTTTT 58.218 25.926 0.00 0.00 32.59 1.94
7659 10913 9.701355 AAAGATGCACAAACTTTTTAAAATTCG 57.299 25.926 0.55 0.00 31.11 3.34
7660 10914 8.641499 AGATGCACAAACTTTTTAAAATTCGA 57.359 26.923 0.55 0.00 0.00 3.71
7661 10915 8.539674 AGATGCACAAACTTTTTAAAATTCGAC 58.460 29.630 0.55 0.00 0.00 4.20
7662 10916 6.687655 TGCACAAACTTTTTAAAATTCGACG 58.312 32.000 0.55 0.00 0.00 5.12
7663 10917 6.527023 TGCACAAACTTTTTAAAATTCGACGA 59.473 30.769 0.55 0.00 0.00 4.20
7664 10918 6.832412 GCACAAACTTTTTAAAATTCGACGAC 59.168 34.615 0.55 0.00 0.00 4.34
7665 10919 7.324449 CACAAACTTTTTAAAATTCGACGACC 58.676 34.615 0.55 0.00 0.00 4.79
7666 10920 7.219344 CACAAACTTTTTAAAATTCGACGACCT 59.781 33.333 0.55 0.00 0.00 3.85
7667 10921 8.397148 ACAAACTTTTTAAAATTCGACGACCTA 58.603 29.630 0.55 0.00 0.00 3.08
7668 10922 9.389570 CAAACTTTTTAAAATTCGACGACCTAT 57.610 29.630 0.55 0.00 0.00 2.57
7669 10923 9.955208 AAACTTTTTAAAATTCGACGACCTATT 57.045 25.926 0.55 0.00 0.00 1.73
7670 10924 9.955208 AACTTTTTAAAATTCGACGACCTATTT 57.045 25.926 0.55 0.00 0.00 1.40
7671 10925 9.603298 ACTTTTTAAAATTCGACGACCTATTTC 57.397 29.630 0.55 0.00 0.00 2.17
7672 10926 9.821662 CTTTTTAAAATTCGACGACCTATTTCT 57.178 29.630 0.55 0.00 0.00 2.52
7674 10928 9.815936 TTTTAAAATTCGACGACCTATTTCTTC 57.184 29.630 0.00 0.00 0.00 2.87
7675 10929 6.418585 AAAATTCGACGACCTATTTCTTCC 57.581 37.500 0.00 0.00 0.00 3.46
7676 10930 4.730949 ATTCGACGACCTATTTCTTCCA 57.269 40.909 0.00 0.00 0.00 3.53
7677 10931 4.524316 TTCGACGACCTATTTCTTCCAA 57.476 40.909 0.00 0.00 0.00 3.53
7678 10932 3.841643 TCGACGACCTATTTCTTCCAAC 58.158 45.455 0.00 0.00 0.00 3.77
7679 10933 2.928116 CGACGACCTATTTCTTCCAACC 59.072 50.000 0.00 0.00 0.00 3.77
7680 10934 3.615592 CGACGACCTATTTCTTCCAACCA 60.616 47.826 0.00 0.00 0.00 3.67
7681 10935 3.671716 ACGACCTATTTCTTCCAACCAC 58.328 45.455 0.00 0.00 0.00 4.16
7682 10936 3.326880 ACGACCTATTTCTTCCAACCACT 59.673 43.478 0.00 0.00 0.00 4.00
7683 10937 3.684788 CGACCTATTTCTTCCAACCACTG 59.315 47.826 0.00 0.00 0.00 3.66
7684 10938 4.562757 CGACCTATTTCTTCCAACCACTGA 60.563 45.833 0.00 0.00 0.00 3.41
7685 10939 5.313712 GACCTATTTCTTCCAACCACTGAA 58.686 41.667 0.00 0.00 0.00 3.02
7686 10940 5.070685 ACCTATTTCTTCCAACCACTGAAC 58.929 41.667 0.00 0.00 0.00 3.18
7687 10941 5.163088 ACCTATTTCTTCCAACCACTGAACT 60.163 40.000 0.00 0.00 0.00 3.01
7688 10942 6.043938 ACCTATTTCTTCCAACCACTGAACTA 59.956 38.462 0.00 0.00 0.00 2.24
7689 10943 7.112779 CCTATTTCTTCCAACCACTGAACTAT 58.887 38.462 0.00 0.00 0.00 2.12
7690 10944 7.611855 CCTATTTCTTCCAACCACTGAACTATT 59.388 37.037 0.00 0.00 0.00 1.73
7691 10945 7.839680 ATTTCTTCCAACCACTGAACTATTT 57.160 32.000 0.00 0.00 0.00 1.40
7692 10946 7.654022 TTTCTTCCAACCACTGAACTATTTT 57.346 32.000 0.00 0.00 0.00 1.82
7693 10947 7.654022 TTCTTCCAACCACTGAACTATTTTT 57.346 32.000 0.00 0.00 0.00 1.94
7694 10948 7.272037 TCTTCCAACCACTGAACTATTTTTC 57.728 36.000 0.00 0.00 0.00 2.29
7695 10949 5.682943 TCCAACCACTGAACTATTTTTCG 57.317 39.130 0.00 0.00 0.00 3.46
7696 10950 5.369833 TCCAACCACTGAACTATTTTTCGA 58.630 37.500 0.00 0.00 0.00 3.71
7697 10951 5.823570 TCCAACCACTGAACTATTTTTCGAA 59.176 36.000 0.00 0.00 0.00 3.71
7698 10952 6.488683 TCCAACCACTGAACTATTTTTCGAAT 59.511 34.615 0.00 0.00 0.00 3.34
7699 10953 7.013846 TCCAACCACTGAACTATTTTTCGAATT 59.986 33.333 0.00 0.00 0.00 2.17
7700 10954 7.651704 CCAACCACTGAACTATTTTTCGAATTT 59.348 33.333 0.00 0.00 0.00 1.82
7701 10955 8.479280 CAACCACTGAACTATTTTTCGAATTTG 58.521 33.333 0.00 0.00 0.00 2.32
7702 10956 7.936584 ACCACTGAACTATTTTTCGAATTTGA 58.063 30.769 0.00 0.00 0.00 2.69
7703 10957 7.860872 ACCACTGAACTATTTTTCGAATTTGAC 59.139 33.333 0.00 0.00 0.00 3.18
7704 10958 7.059488 CCACTGAACTATTTTTCGAATTTGACG 59.941 37.037 0.00 0.00 0.00 4.35
7705 10959 7.796660 CACTGAACTATTTTTCGAATTTGACGA 59.203 33.333 0.00 0.00 37.99 4.20
7706 10960 8.339714 ACTGAACTATTTTTCGAATTTGACGAA 58.660 29.630 0.00 0.00 45.65 3.85
7707 10961 8.483743 TGAACTATTTTTCGAATTTGACGAAC 57.516 30.769 0.00 0.00 46.66 3.95
7708 10962 8.339714 TGAACTATTTTTCGAATTTGACGAACT 58.660 29.630 0.00 0.00 46.66 3.01
7709 10963 9.166126 GAACTATTTTTCGAATTTGACGAACTT 57.834 29.630 0.00 0.00 46.66 2.66
7710 10964 9.511144 AACTATTTTTCGAATTTGACGAACTTT 57.489 25.926 0.00 0.00 46.66 2.66
7711 10965 9.511144 ACTATTTTTCGAATTTGACGAACTTTT 57.489 25.926 0.00 0.00 46.66 2.27
7714 10968 7.798486 TTTTCGAATTTGACGAACTTTTTCA 57.202 28.000 0.00 0.00 46.66 2.69
7715 10969 7.798486 TTTCGAATTTGACGAACTTTTTCAA 57.202 28.000 0.00 0.00 46.66 2.69
7716 10970 7.798486 TTCGAATTTGACGAACTTTTTCAAA 57.202 28.000 0.00 0.00 43.19 2.69
7717 10971 7.979115 TCGAATTTGACGAACTTTTTCAAAT 57.021 28.000 3.50 3.50 46.88 2.32
7727 10981 7.204737 CGAACTTTTTCAAATTCGTTCAACT 57.795 32.000 0.00 0.00 39.21 3.16
7728 10982 7.662761 CGAACTTTTTCAAATTCGTTCAACTT 58.337 30.769 0.00 0.00 39.21 2.66
7729 10983 8.159709 CGAACTTTTTCAAATTCGTTCAACTTT 58.840 29.630 0.00 0.00 39.21 2.66
7730 10984 9.805966 GAACTTTTTCAAATTCGTTCAACTTTT 57.194 25.926 0.00 0.00 33.05 2.27
7755 11009 9.664332 TTTTTCCAATTCAATGAACTTTTCTCA 57.336 25.926 0.00 0.00 0.00 3.27
7756 11010 9.664332 TTTTCCAATTCAATGAACTTTTCTCAA 57.336 25.926 0.00 0.00 0.00 3.02
7757 11011 9.835389 TTTCCAATTCAATGAACTTTTCTCAAT 57.165 25.926 0.00 0.00 0.00 2.57
7758 11012 9.835389 TTCCAATTCAATGAACTTTTCTCAATT 57.165 25.926 0.00 0.00 0.00 2.32
7759 11013 9.835389 TCCAATTCAATGAACTTTTCTCAATTT 57.165 25.926 0.00 0.00 0.00 1.82
7832 11086 9.753669 AAAAATCATTGAACGTTCTTTTCAAAC 57.246 25.926 27.32 0.32 44.14 2.93
7833 11087 7.463469 AATCATTGAACGTTCTTTTCAAACC 57.537 32.000 27.32 0.00 44.14 3.27
7834 11088 5.955488 TCATTGAACGTTCTTTTCAAACCA 58.045 33.333 27.32 2.40 44.14 3.67
7835 11089 6.390721 TCATTGAACGTTCTTTTCAAACCAA 58.609 32.000 27.32 11.38 44.14 3.67
7836 11090 6.309251 TCATTGAACGTTCTTTTCAAACCAAC 59.691 34.615 27.32 0.00 44.14 3.77
7837 11091 5.122512 TGAACGTTCTTTTCAAACCAACA 57.877 34.783 27.32 1.20 29.89 3.33
7838 11092 5.529791 TGAACGTTCTTTTCAAACCAACAA 58.470 33.333 27.32 0.00 29.89 2.83
7839 11093 5.983720 TGAACGTTCTTTTCAAACCAACAAA 59.016 32.000 27.32 0.00 29.89 2.83
7840 11094 5.832568 ACGTTCTTTTCAAACCAACAAAC 57.167 34.783 0.00 0.00 0.00 2.93
7841 11095 4.687018 ACGTTCTTTTCAAACCAACAAACC 59.313 37.500 0.00 0.00 0.00 3.27
7842 11096 4.926832 CGTTCTTTTCAAACCAACAAACCT 59.073 37.500 0.00 0.00 0.00 3.50
7843 11097 5.407084 CGTTCTTTTCAAACCAACAAACCTT 59.593 36.000 0.00 0.00 0.00 3.50
7844 11098 6.073494 CGTTCTTTTCAAACCAACAAACCTTT 60.073 34.615 0.00 0.00 0.00 3.11
7845 11099 7.519168 CGTTCTTTTCAAACCAACAAACCTTTT 60.519 33.333 0.00 0.00 0.00 2.27
7846 11100 7.809546 TCTTTTCAAACCAACAAACCTTTTT 57.190 28.000 0.00 0.00 0.00 1.94
7847 11101 7.866729 TCTTTTCAAACCAACAAACCTTTTTC 58.133 30.769 0.00 0.00 0.00 2.29
7848 11102 7.499232 TCTTTTCAAACCAACAAACCTTTTTCA 59.501 29.630 0.00 0.00 0.00 2.69
7849 11103 7.568199 TTTCAAACCAACAAACCTTTTTCAA 57.432 28.000 0.00 0.00 0.00 2.69
7850 11104 7.568199 TTCAAACCAACAAACCTTTTTCAAA 57.432 28.000 0.00 0.00 0.00 2.69
7851 11105 7.751768 TCAAACCAACAAACCTTTTTCAAAT 57.248 28.000 0.00 0.00 0.00 2.32
7852 11106 8.171164 TCAAACCAACAAACCTTTTTCAAATT 57.829 26.923 0.00 0.00 0.00 1.82
7853 11107 8.293157 TCAAACCAACAAACCTTTTTCAAATTC 58.707 29.630 0.00 0.00 0.00 2.17
7854 11108 7.994425 AACCAACAAACCTTTTTCAAATTCT 57.006 28.000 0.00 0.00 0.00 2.40
7855 11109 9.508642 AAACCAACAAACCTTTTTCAAATTCTA 57.491 25.926 0.00 0.00 0.00 2.10
7856 11110 9.679661 AACCAACAAACCTTTTTCAAATTCTAT 57.320 25.926 0.00 0.00 0.00 1.98
7857 11111 9.679661 ACCAACAAACCTTTTTCAAATTCTATT 57.320 25.926 0.00 0.00 0.00 1.73
7914 11168 8.716646 AAATTTGACGGACTCTTTTTCAATTT 57.283 26.923 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
68 69 2.494918 CCCTTCGCTCGTCCGAAT 59.505 61.111 11.86 0.00 45.03 3.34
140 149 0.869454 CTCGCTCGCCTTCTGATGAC 60.869 60.000 0.00 0.00 0.00 3.06
154 176 3.710722 CAGGCAACCCCTCTCGCT 61.711 66.667 0.00 0.00 44.09 4.93
307 343 4.778143 GAGGCCCGGAACACGCAT 62.778 66.667 0.73 0.00 42.52 4.73
382 418 2.659063 GCCTGGGAATGGTTTGGGC 61.659 63.158 0.00 0.00 0.00 5.36
411 447 2.354188 TCGTGTTCTCGTGCGTGG 60.354 61.111 0.00 0.00 0.00 4.94
552 588 2.621526 TCGATCCGAGCAAGCTACATAA 59.378 45.455 0.00 0.00 0.00 1.90
566 602 0.921347 AAGCGAAACGAATCGATCCG 59.079 50.000 10.55 1.21 45.48 4.18
620 676 6.601613 TCCCACCACACAAAATCAATATACTC 59.398 38.462 0.00 0.00 0.00 2.59
621 677 6.489603 TCCCACCACACAAAATCAATATACT 58.510 36.000 0.00 0.00 0.00 2.12
622 678 6.767524 TCCCACCACACAAAATCAATATAC 57.232 37.500 0.00 0.00 0.00 1.47
628 684 3.494048 GCAATTCCCACCACACAAAATCA 60.494 43.478 0.00 0.00 0.00 2.57
663 719 3.160777 AGCTTCGTAATACACTTCCCG 57.839 47.619 0.00 0.00 0.00 5.14
671 727 4.335594 AGCATCCCAAAAGCTTCGTAATAC 59.664 41.667 0.00 0.00 34.37 1.89
714 773 7.010552 CAGTACCAAAATCAGACTATCTTTCGG 59.989 40.741 0.00 0.00 0.00 4.30
724 783 2.159627 CACCGCAGTACCAAAATCAGAC 59.840 50.000 0.00 0.00 0.00 3.51
728 787 0.170339 GCCACCGCAGTACCAAAATC 59.830 55.000 0.00 0.00 34.03 2.17
760 819 3.744426 CCACAGTACCAGTTAAAACGAGG 59.256 47.826 0.00 6.02 35.82 4.63
809 874 3.454082 AGGAAGTTGTGGATTTGGCAAAA 59.546 39.130 17.70 0.00 0.00 2.44
823 888 7.383102 ACAGCTTAACATATCAAGGAAGTTG 57.617 36.000 0.00 0.00 37.52 3.16
858 923 2.046120 GCAGGAGCAGCAGAGCTT 60.046 61.111 0.00 0.00 46.75 3.74
882 947 5.931441 AAGAAGACATTACTTGCAGACAC 57.069 39.130 0.00 0.00 0.00 3.67
932 997 5.895928 TGCAGCGATAGAATATCATAGACC 58.104 41.667 0.00 0.00 39.76 3.85
937 1002 5.163683 GCCAATTGCAGCGATAGAATATCAT 60.164 40.000 0.00 0.00 40.77 2.45
948 1013 0.961857 ACATGAGCCAATTGCAGCGA 60.962 50.000 0.00 0.00 44.83 4.93
1276 1342 2.125350 CCTCTCCAAGCAGGCGAC 60.125 66.667 0.00 0.00 37.29 5.19
1291 1357 2.900546 AGACCAAGACAGATTCGTTCCT 59.099 45.455 0.00 0.00 0.00 3.36
1554 1620 2.711009 ACCAACTTCCTTGATCACCTCA 59.289 45.455 0.00 0.00 30.42 3.86
1686 1752 1.805943 TCAGTTGCATTCGACATGGTG 59.194 47.619 0.00 0.00 0.00 4.17
1704 1770 3.273434 GCATATCCACTCAGCAAACTCA 58.727 45.455 0.00 0.00 0.00 3.41
2110 2177 2.851263 CCAGCAGGTGGTAAACTACA 57.149 50.000 10.82 0.00 42.17 2.74
2153 2220 7.810658 ACAGTGAATATCATCAAGTGAAACAC 58.189 34.615 0.00 0.00 40.97 3.32
2214 2284 3.853355 AAGCAGGGATATTGACTGGAG 57.147 47.619 0.00 0.00 32.98 3.86
2638 2716 5.165961 TCCTTTGAGGAGTACAATTCCAG 57.834 43.478 0.00 0.00 40.06 3.86
2646 2724 8.722394 CAAAATAGAAGTTCCTTTGAGGAGTAC 58.278 37.037 13.56 0.00 46.73 2.73
3175 3285 5.059833 TCAACAACAACAACAAAGCCTTTT 58.940 33.333 0.00 0.00 0.00 2.27
3198 3308 4.717279 TGATCATCACCACCATCATCAT 57.283 40.909 0.00 0.00 0.00 2.45
3201 3317 3.154710 GCATGATCATCACCACCATCAT 58.845 45.455 4.86 0.00 36.59 2.45
3207 3323 0.659427 CCGTGCATGATCATCACCAC 59.341 55.000 21.98 18.94 32.15 4.16
3210 3326 3.976793 AATTCCGTGCATGATCATCAC 57.023 42.857 19.83 19.83 0.00 3.06
3268 3384 2.029623 CTGCAAAATCTGGATGGAGGG 58.970 52.381 0.00 0.00 0.00 4.30
3533 5090 5.141182 ACTCAGGTGAGAACTAAGAACAGA 58.859 41.667 13.99 0.00 44.74 3.41
3600 5162 5.640783 TCAAGCATGAACATAGAACAGTCTG 59.359 40.000 0.00 0.00 31.75 3.51
4218 5807 2.633481 ACCGAAATAGCATACCTCTCCC 59.367 50.000 0.00 0.00 0.00 4.30
4325 5915 5.869579 TCAAGTTCAGATATATCAAGCCCC 58.130 41.667 15.08 0.00 0.00 5.80
4485 6077 6.603237 TTTACAGAATCCACATCATAAGCG 57.397 37.500 0.00 0.00 0.00 4.68
4522 6215 7.451501 TGATGCAAATTACTCAGTGAAATGA 57.548 32.000 0.00 0.00 0.00 2.57
4725 6429 1.754234 GGTGGGCATGGCTTCGAAT 60.754 57.895 19.78 0.00 0.00 3.34
4729 6433 2.825836 CGAGGTGGGCATGGCTTC 60.826 66.667 19.78 11.85 0.00 3.86
4884 6589 4.084223 GCACCTGCAAAAATCTCAACATTG 60.084 41.667 0.00 0.00 41.59 2.82
5188 7180 2.093816 TCTGGAGAGCTGTGCTAATGTG 60.094 50.000 3.55 0.00 39.88 3.21
5256 7248 6.667414 AGCATTTGTTTTCCCCATCTGTATAA 59.333 34.615 0.00 0.00 0.00 0.98
5265 7257 3.704061 GGCTATAGCATTTGTTTTCCCCA 59.296 43.478 25.53 0.00 44.36 4.96
5298 7458 4.998033 AGGAAAGAATGACGGAGAAACTTC 59.002 41.667 0.00 0.00 0.00 3.01
5398 7560 3.947834 GGTTCTTCAATACCCATGTCCTG 59.052 47.826 0.00 0.00 0.00 3.86
6143 8320 9.666626 GGCGATATAGTGATGATACAAGTATAC 57.333 37.037 0.00 0.00 0.00 1.47
6144 8321 9.403583 TGGCGATATAGTGATGATACAAGTATA 57.596 33.333 0.00 0.00 0.00 1.47
6145 8322 8.191446 GTGGCGATATAGTGATGATACAAGTAT 58.809 37.037 0.00 0.00 0.00 2.12
6146 8323 7.362660 GGTGGCGATATAGTGATGATACAAGTA 60.363 40.741 0.00 0.00 0.00 2.24
6147 8324 6.390721 GTGGCGATATAGTGATGATACAAGT 58.609 40.000 0.00 0.00 0.00 3.16
6148 8325 5.807520 GGTGGCGATATAGTGATGATACAAG 59.192 44.000 0.00 0.00 0.00 3.16
6551 8733 3.515502 TCATTTCTGTCACCTCTCCGAAT 59.484 43.478 0.00 0.00 0.00 3.34
6673 8855 5.114780 CAGACACTCTCATTATCCAAGTGG 58.885 45.833 5.87 0.00 41.23 4.00
6806 8990 6.951062 TGTTGACAGTTTATGGACATTTCA 57.049 33.333 0.00 0.00 0.00 2.69
6834 9771 4.670896 TCTGTCATGTCACAGTTGAGAA 57.329 40.909 12.77 0.00 43.80 2.87
6853 9790 7.170965 ACAGTCCAACTTGTTCATCATATTCT 58.829 34.615 0.00 0.00 0.00 2.40
6949 9888 4.081198 TGCAGAAAAGGGCAAAGAAGAAAA 60.081 37.500 0.00 0.00 37.03 2.29
7006 9948 7.766283 AGCAAGCTTATTTTCCTGACTATTTC 58.234 34.615 0.00 0.00 0.00 2.17
7118 10060 0.034896 ACTCGCCGATCCAAACTTGT 59.965 50.000 0.00 0.00 0.00 3.16
7380 10634 3.498777 GCCAGACGCTAAATAGGATTTCC 59.501 47.826 0.00 0.00 0.00 3.13
7381 10635 3.184581 CGCCAGACGCTAAATAGGATTTC 59.815 47.826 0.00 0.00 34.21 2.17
7382 10636 3.131396 CGCCAGACGCTAAATAGGATTT 58.869 45.455 0.00 0.00 34.21 2.17
7383 10637 2.755650 CGCCAGACGCTAAATAGGATT 58.244 47.619 0.00 0.00 34.21 3.01
7384 10638 2.440539 CGCCAGACGCTAAATAGGAT 57.559 50.000 0.00 0.00 34.21 3.24
7385 10639 3.959478 CGCCAGACGCTAAATAGGA 57.041 52.632 0.00 0.00 34.21 2.94
7403 10657 3.497031 GTAACCCGCGCCTGAAGC 61.497 66.667 0.00 0.00 38.52 3.86
7404 10658 2.047655 TGTAACCCGCGCCTGAAG 60.048 61.111 0.00 0.00 0.00 3.02
7405 10659 2.047655 CTGTAACCCGCGCCTGAA 60.048 61.111 0.00 0.00 0.00 3.02
7406 10660 4.077184 CCTGTAACCCGCGCCTGA 62.077 66.667 0.00 0.00 0.00 3.86
7407 10661 4.388499 ACCTGTAACCCGCGCCTG 62.388 66.667 0.00 0.00 0.00 4.85
7408 10662 4.388499 CACCTGTAACCCGCGCCT 62.388 66.667 0.00 0.00 0.00 5.52
7409 10663 4.692475 ACACCTGTAACCCGCGCC 62.692 66.667 0.00 0.00 0.00 6.53
7410 10664 1.788067 AAAACACCTGTAACCCGCGC 61.788 55.000 0.00 0.00 0.00 6.86
7411 10665 0.664224 AAAAACACCTGTAACCCGCG 59.336 50.000 0.00 0.00 0.00 6.46
7412 10666 2.617774 TGTAAAAACACCTGTAACCCGC 59.382 45.455 0.00 0.00 0.00 6.13
7413 10667 4.897025 TTGTAAAAACACCTGTAACCCG 57.103 40.909 0.00 0.00 0.00 5.28
7414 10668 6.037726 CAGTTTGTAAAAACACCTGTAACCC 58.962 40.000 11.11 0.00 35.20 4.11
7415 10669 6.037726 CCAGTTTGTAAAAACACCTGTAACC 58.962 40.000 11.11 0.00 35.20 2.85
7416 10670 5.517411 GCCAGTTTGTAAAAACACCTGTAAC 59.483 40.000 11.11 0.00 35.20 2.50
7417 10671 5.652518 GCCAGTTTGTAAAAACACCTGTAA 58.347 37.500 11.11 0.00 35.20 2.41
7418 10672 4.201930 CGCCAGTTTGTAAAAACACCTGTA 60.202 41.667 11.11 0.00 35.20 2.74
7419 10673 3.428316 CGCCAGTTTGTAAAAACACCTGT 60.428 43.478 11.11 0.00 35.20 4.00
7420 10674 3.112580 CGCCAGTTTGTAAAAACACCTG 58.887 45.455 11.11 0.83 35.20 4.00
7421 10675 2.480587 GCGCCAGTTTGTAAAAACACCT 60.481 45.455 11.11 0.00 35.20 4.00
7422 10676 1.855978 GCGCCAGTTTGTAAAAACACC 59.144 47.619 11.11 0.00 35.20 4.16
7423 10677 1.855978 GGCGCCAGTTTGTAAAAACAC 59.144 47.619 24.80 0.00 35.20 3.32
7424 10678 1.751924 AGGCGCCAGTTTGTAAAAACA 59.248 42.857 31.54 0.00 35.20 2.83
7425 10679 2.124122 CAGGCGCCAGTTTGTAAAAAC 58.876 47.619 31.54 0.00 0.00 2.43
7426 10680 2.025155 TCAGGCGCCAGTTTGTAAAAA 58.975 42.857 31.54 0.00 0.00 1.94
7427 10681 1.681538 TCAGGCGCCAGTTTGTAAAA 58.318 45.000 31.54 0.00 0.00 1.52
7428 10682 1.606668 CTTCAGGCGCCAGTTTGTAAA 59.393 47.619 31.54 8.76 0.00 2.01
7429 10683 1.234821 CTTCAGGCGCCAGTTTGTAA 58.765 50.000 31.54 9.55 0.00 2.41
7430 10684 1.234615 GCTTCAGGCGCCAGTTTGTA 61.235 55.000 31.54 10.96 0.00 2.41
7431 10685 2.555547 GCTTCAGGCGCCAGTTTGT 61.556 57.895 31.54 2.66 0.00 2.83
7432 10686 2.256461 GCTTCAGGCGCCAGTTTG 59.744 61.111 31.54 18.66 0.00 2.93
7433 10687 2.203337 TGCTTCAGGCGCCAGTTT 60.203 55.556 31.54 4.11 45.43 2.66
7434 10688 2.670934 CTGCTTCAGGCGCCAGTT 60.671 61.111 31.54 4.59 45.43 3.16
7439 10693 4.774503 AGGAGCTGCTTCAGGCGC 62.775 66.667 11.19 0.00 45.43 6.53
7440 10694 2.046507 AAGGAGCTGCTTCAGGCG 60.047 61.111 15.60 0.00 45.43 5.52
7441 10695 1.002868 TGAAGGAGCTGCTTCAGGC 60.003 57.895 37.67 19.49 42.22 4.85
7442 10696 0.676151 GGTGAAGGAGCTGCTTCAGG 60.676 60.000 40.57 0.00 39.82 3.86
7443 10697 1.018226 CGGTGAAGGAGCTGCTTCAG 61.018 60.000 40.57 29.23 39.82 3.02
7444 10698 1.004560 CGGTGAAGGAGCTGCTTCA 60.005 57.895 37.67 37.67 37.26 3.02
7445 10699 1.743252 CCGGTGAAGGAGCTGCTTC 60.743 63.158 33.84 33.84 0.00 3.86
7446 10700 2.056906 AACCGGTGAAGGAGCTGCTT 62.057 55.000 21.55 21.55 34.73 3.91
7447 10701 1.192146 TAACCGGTGAAGGAGCTGCT 61.192 55.000 8.52 0.00 34.73 4.24
7448 10702 1.019805 GTAACCGGTGAAGGAGCTGC 61.020 60.000 8.52 0.00 34.73 5.25
7449 10703 0.320374 TGTAACCGGTGAAGGAGCTG 59.680 55.000 8.52 0.00 34.73 4.24
7450 10704 1.002087 CTTGTAACCGGTGAAGGAGCT 59.998 52.381 8.52 0.00 34.73 4.09
7451 10705 1.270678 ACTTGTAACCGGTGAAGGAGC 60.271 52.381 8.52 0.00 34.73 4.70
7452 10706 2.224209 ACACTTGTAACCGGTGAAGGAG 60.224 50.000 8.52 10.52 35.28 3.69
7453 10707 1.764134 ACACTTGTAACCGGTGAAGGA 59.236 47.619 8.52 0.00 35.28 3.36
7454 10708 2.249844 ACACTTGTAACCGGTGAAGG 57.750 50.000 8.52 7.84 35.28 3.46
7455 10709 4.625972 AAAACACTTGTAACCGGTGAAG 57.374 40.909 8.52 13.67 35.28 3.02
7456 10710 5.413833 TGTAAAAACACTTGTAACCGGTGAA 59.586 36.000 8.52 0.03 35.28 3.18
7457 10711 4.940046 TGTAAAAACACTTGTAACCGGTGA 59.060 37.500 8.52 0.00 35.28 4.02
7458 10712 5.232610 TGTAAAAACACTTGTAACCGGTG 57.767 39.130 8.52 0.00 37.05 4.94
7459 10713 5.893897 TTGTAAAAACACTTGTAACCGGT 57.106 34.783 0.00 0.00 0.00 5.28
7460 10714 6.251801 CAGTTTGTAAAAACACTTGTAACCGG 59.748 38.462 11.11 0.00 35.20 5.28
7461 10715 6.251801 CCAGTTTGTAAAAACACTTGTAACCG 59.748 38.462 11.11 0.00 35.20 4.44
7462 10716 6.035220 GCCAGTTTGTAAAAACACTTGTAACC 59.965 38.462 11.11 0.00 35.20 2.85
7463 10717 6.237358 CGCCAGTTTGTAAAAACACTTGTAAC 60.237 38.462 11.11 0.00 35.20 2.50
7464 10718 5.800941 CGCCAGTTTGTAAAAACACTTGTAA 59.199 36.000 11.11 0.00 35.20 2.41
7465 10719 5.333513 CGCCAGTTTGTAAAAACACTTGTA 58.666 37.500 11.11 0.00 35.20 2.41
7466 10720 4.170256 CGCCAGTTTGTAAAAACACTTGT 58.830 39.130 11.11 0.00 35.20 3.16
7467 10721 3.000177 GCGCCAGTTTGTAAAAACACTTG 60.000 43.478 11.11 0.83 35.20 3.16
7468 10722 3.183754 GCGCCAGTTTGTAAAAACACTT 58.816 40.909 11.11 0.00 35.20 3.16
7469 10723 2.480587 GGCGCCAGTTTGTAAAAACACT 60.481 45.455 24.80 0.00 35.20 3.55
7470 10724 1.855978 GGCGCCAGTTTGTAAAAACAC 59.144 47.619 24.80 0.00 35.20 3.32
7471 10725 1.751924 AGGCGCCAGTTTGTAAAAACA 59.248 42.857 31.54 0.00 35.20 2.83
7472 10726 2.124122 CAGGCGCCAGTTTGTAAAAAC 58.876 47.619 31.54 0.00 0.00 2.43
7473 10727 2.025155 TCAGGCGCCAGTTTGTAAAAA 58.975 42.857 31.54 0.00 0.00 1.94
7474 10728 1.681538 TCAGGCGCCAGTTTGTAAAA 58.318 45.000 31.54 0.00 0.00 1.52
7475 10729 1.606668 CTTCAGGCGCCAGTTTGTAAA 59.393 47.619 31.54 8.76 0.00 2.01
7476 10730 1.234821 CTTCAGGCGCCAGTTTGTAA 58.765 50.000 31.54 9.55 0.00 2.41
7477 10731 1.234615 GCTTCAGGCGCCAGTTTGTA 61.235 55.000 31.54 10.96 0.00 2.41
7478 10732 2.555547 GCTTCAGGCGCCAGTTTGT 61.556 57.895 31.54 2.66 0.00 2.83
7479 10733 2.256461 GCTTCAGGCGCCAGTTTG 59.744 61.111 31.54 18.66 0.00 2.93
7480 10734 2.203337 TGCTTCAGGCGCCAGTTT 60.203 55.556 31.54 4.11 45.43 2.66
7481 10735 2.670934 CTGCTTCAGGCGCCAGTT 60.671 61.111 31.54 4.59 45.43 3.16
7486 10740 4.774503 AGGAGCTGCTTCAGGCGC 62.775 66.667 11.19 0.00 45.43 6.53
7487 10741 2.046507 AAGGAGCTGCTTCAGGCG 60.047 61.111 15.60 0.00 45.43 5.52
7488 10742 1.002868 TGAAGGAGCTGCTTCAGGC 60.003 57.895 37.67 19.49 42.22 4.85
7489 10743 1.018226 CGTGAAGGAGCTGCTTCAGG 61.018 60.000 40.57 39.40 39.82 3.86
7490 10744 1.018226 CCGTGAAGGAGCTGCTTCAG 61.018 60.000 40.57 32.24 45.00 3.02
7491 10745 1.004560 CCGTGAAGGAGCTGCTTCA 60.005 57.895 37.67 37.67 45.00 3.02
7492 10746 1.743252 CCCGTGAAGGAGCTGCTTC 60.743 63.158 33.84 33.84 45.00 3.86
7493 10747 2.348998 CCCGTGAAGGAGCTGCTT 59.651 61.111 21.55 21.55 45.00 3.91
7494 10748 3.710722 CCCCGTGAAGGAGCTGCT 61.711 66.667 0.00 0.00 45.00 4.24
7495 10749 3.672295 CTCCCCGTGAAGGAGCTGC 62.672 68.421 0.00 0.00 44.30 5.25
7496 10750 2.581354 CTCCCCGTGAAGGAGCTG 59.419 66.667 0.00 0.00 44.30 4.24
7500 10754 1.701031 TTGCAACTCCCCGTGAAGGA 61.701 55.000 0.00 0.00 45.00 3.36
7501 10755 0.609131 ATTGCAACTCCCCGTGAAGG 60.609 55.000 0.00 0.00 40.63 3.46
7502 10756 2.107950 TATTGCAACTCCCCGTGAAG 57.892 50.000 0.00 0.00 0.00 3.02
7503 10757 2.156098 GTTATTGCAACTCCCCGTGAA 58.844 47.619 0.00 0.00 0.00 3.18
7504 10758 1.816074 GTTATTGCAACTCCCCGTGA 58.184 50.000 0.00 0.00 0.00 4.35
7505 10759 0.446222 CGTTATTGCAACTCCCCGTG 59.554 55.000 0.00 0.00 0.00 4.94
7506 10760 0.675522 CCGTTATTGCAACTCCCCGT 60.676 55.000 0.00 0.00 0.00 5.28
7507 10761 1.988834 GCCGTTATTGCAACTCCCCG 61.989 60.000 0.00 0.00 0.00 5.73
7508 10762 1.663379 GGCCGTTATTGCAACTCCCC 61.663 60.000 0.00 0.00 0.00 4.81
7509 10763 0.679960 AGGCCGTTATTGCAACTCCC 60.680 55.000 0.00 0.00 0.00 4.30
7510 10764 0.451783 CAGGCCGTTATTGCAACTCC 59.548 55.000 0.00 0.00 0.00 3.85
7511 10765 0.451783 CCAGGCCGTTATTGCAACTC 59.548 55.000 0.00 0.00 0.00 3.01
7512 10766 0.965363 CCCAGGCCGTTATTGCAACT 60.965 55.000 0.00 0.00 0.00 3.16
7513 10767 1.510844 CCCAGGCCGTTATTGCAAC 59.489 57.895 0.00 0.00 0.00 4.17
7514 10768 1.680651 CCCCAGGCCGTTATTGCAA 60.681 57.895 0.00 0.00 0.00 4.08
7515 10769 2.044451 CCCCAGGCCGTTATTGCA 60.044 61.111 0.00 0.00 0.00 4.08
7516 10770 3.527427 GCCCCAGGCCGTTATTGC 61.527 66.667 0.00 0.00 44.06 3.56
7526 10780 2.958578 AAGTCGTGTGTTGCCCCAGG 62.959 60.000 0.00 0.00 0.00 4.45
7527 10781 1.525995 AAGTCGTGTGTTGCCCCAG 60.526 57.895 0.00 0.00 0.00 4.45
7528 10782 1.821759 CAAGTCGTGTGTTGCCCCA 60.822 57.895 0.00 0.00 0.00 4.96
7529 10783 1.822186 ACAAGTCGTGTGTTGCCCC 60.822 57.895 0.00 0.00 39.72 5.80
7530 10784 3.821995 ACAAGTCGTGTGTTGCCC 58.178 55.556 0.00 0.00 39.72 5.36
7539 10793 3.492137 GGGAGTAACTGAACACAAGTCGT 60.492 47.826 0.00 0.00 0.00 4.34
7540 10794 3.057734 GGGAGTAACTGAACACAAGTCG 58.942 50.000 0.00 0.00 0.00 4.18
7541 10795 4.067972 TGGGAGTAACTGAACACAAGTC 57.932 45.455 0.00 0.00 0.00 3.01
7542 10796 4.706842 ATGGGAGTAACTGAACACAAGT 57.293 40.909 0.00 0.00 0.00 3.16
7543 10797 5.048713 GGAAATGGGAGTAACTGAACACAAG 60.049 44.000 0.00 0.00 0.00 3.16
7544 10798 4.825085 GGAAATGGGAGTAACTGAACACAA 59.175 41.667 0.00 0.00 0.00 3.33
7545 10799 4.394729 GGAAATGGGAGTAACTGAACACA 58.605 43.478 0.00 0.00 0.00 3.72
7546 10800 3.756963 GGGAAATGGGAGTAACTGAACAC 59.243 47.826 0.00 0.00 0.00 3.32
7547 10801 3.245122 GGGGAAATGGGAGTAACTGAACA 60.245 47.826 0.00 0.00 0.00 3.18
7548 10802 3.245122 TGGGGAAATGGGAGTAACTGAAC 60.245 47.826 0.00 0.00 0.00 3.18
7549 10803 2.990284 TGGGGAAATGGGAGTAACTGAA 59.010 45.455 0.00 0.00 0.00 3.02
7550 10804 2.638325 TGGGGAAATGGGAGTAACTGA 58.362 47.619 0.00 0.00 0.00 3.41
7551 10805 3.669939 ATGGGGAAATGGGAGTAACTG 57.330 47.619 0.00 0.00 0.00 3.16
7552 10806 3.858638 AGAATGGGGAAATGGGAGTAACT 59.141 43.478 0.00 0.00 0.00 2.24
7553 10807 3.954258 CAGAATGGGGAAATGGGAGTAAC 59.046 47.826 0.00 0.00 0.00 2.50
7554 10808 3.596046 ACAGAATGGGGAAATGGGAGTAA 59.404 43.478 0.00 0.00 43.62 2.24
7555 10809 3.197983 ACAGAATGGGGAAATGGGAGTA 58.802 45.455 0.00 0.00 43.62 2.59
7556 10810 2.003072 ACAGAATGGGGAAATGGGAGT 58.997 47.619 0.00 0.00 43.62 3.85
7557 10811 2.834638 ACAGAATGGGGAAATGGGAG 57.165 50.000 0.00 0.00 43.62 4.30
7558 10812 2.654385 AGAACAGAATGGGGAAATGGGA 59.346 45.455 0.00 0.00 43.62 4.37
7559 10813 3.105959 AGAACAGAATGGGGAAATGGG 57.894 47.619 0.00 0.00 43.62 4.00
7560 10814 4.081476 GGAAAGAACAGAATGGGGAAATGG 60.081 45.833 0.00 0.00 43.62 3.16
7561 10815 4.774200 AGGAAAGAACAGAATGGGGAAATG 59.226 41.667 0.00 0.00 43.62 2.32
7562 10816 5.015813 AGGAAAGAACAGAATGGGGAAAT 57.984 39.130 0.00 0.00 43.62 2.17
7563 10817 4.469469 AGGAAAGAACAGAATGGGGAAA 57.531 40.909 0.00 0.00 43.62 3.13
7564 10818 4.469469 AAGGAAAGAACAGAATGGGGAA 57.531 40.909 0.00 0.00 43.62 3.97
7565 10819 4.469469 AAAGGAAAGAACAGAATGGGGA 57.531 40.909 0.00 0.00 43.62 4.81
7566 10820 5.305386 AGAAAAAGGAAAGAACAGAATGGGG 59.695 40.000 0.00 0.00 43.62 4.96
7567 10821 6.410942 AGAAAAAGGAAAGAACAGAATGGG 57.589 37.500 0.00 0.00 43.62 4.00
7568 10822 8.722480 AAAAGAAAAAGGAAAGAACAGAATGG 57.278 30.769 0.00 0.00 43.62 3.16
7569 10823 9.591792 AGAAAAGAAAAAGGAAAGAACAGAATG 57.408 29.630 0.00 0.00 46.00 2.67
7570 10824 9.809096 GAGAAAAGAAAAAGGAAAGAACAGAAT 57.191 29.630 0.00 0.00 0.00 2.40
7571 10825 9.025041 AGAGAAAAGAAAAAGGAAAGAACAGAA 57.975 29.630 0.00 0.00 0.00 3.02
7572 10826 8.581253 AGAGAAAAGAAAAAGGAAAGAACAGA 57.419 30.769 0.00 0.00 0.00 3.41
7573 10827 9.645059 AAAGAGAAAAGAAAAAGGAAAGAACAG 57.355 29.630 0.00 0.00 0.00 3.16
7574 10828 9.639601 GAAAGAGAAAAGAAAAAGGAAAGAACA 57.360 29.630 0.00 0.00 0.00 3.18
7575 10829 9.862371 AGAAAGAGAAAAGAAAAAGGAAAGAAC 57.138 29.630 0.00 0.00 0.00 3.01
7577 10831 9.860898 CAAGAAAGAGAAAAGAAAAAGGAAAGA 57.139 29.630 0.00 0.00 0.00 2.52
7578 10832 9.645059 ACAAGAAAGAGAAAAGAAAAAGGAAAG 57.355 29.630 0.00 0.00 0.00 2.62
7579 10833 9.996554 AACAAGAAAGAGAAAAGAAAAAGGAAA 57.003 25.926 0.00 0.00 0.00 3.13
7580 10834 9.996554 AAACAAGAAAGAGAAAAGAAAAAGGAA 57.003 25.926 0.00 0.00 0.00 3.36
7581 10835 9.423061 CAAACAAGAAAGAGAAAAGAAAAAGGA 57.577 29.630 0.00 0.00 0.00 3.36
7582 10836 9.208022 ACAAACAAGAAAGAGAAAAGAAAAAGG 57.792 29.630 0.00 0.00 0.00 3.11
7614 10868 9.481800 GCATCTTTGAAAAAGAAAGAAAAACTG 57.518 29.630 6.53 0.00 41.55 3.16
7615 10869 9.218440 TGCATCTTTGAAAAAGAAAGAAAAACT 57.782 25.926 6.53 0.00 41.55 2.66
7616 10870 9.265938 GTGCATCTTTGAAAAAGAAAGAAAAAC 57.734 29.630 6.53 0.00 41.55 2.43
7617 10871 8.997323 TGTGCATCTTTGAAAAAGAAAGAAAAA 58.003 25.926 6.53 0.00 41.55 1.94
7618 10872 8.545229 TGTGCATCTTTGAAAAAGAAAGAAAA 57.455 26.923 6.53 0.00 41.55 2.29
7619 10873 8.545229 TTGTGCATCTTTGAAAAAGAAAGAAA 57.455 26.923 6.53 0.00 41.55 2.52
7620 10874 8.442384 GTTTGTGCATCTTTGAAAAAGAAAGAA 58.558 29.630 6.53 0.00 41.55 2.52
7621 10875 7.818930 AGTTTGTGCATCTTTGAAAAAGAAAGA 59.181 29.630 6.53 0.00 42.23 2.52
7622 10876 7.967178 AGTTTGTGCATCTTTGAAAAAGAAAG 58.033 30.769 6.53 4.41 0.00 2.62
7623 10877 7.903995 AGTTTGTGCATCTTTGAAAAAGAAA 57.096 28.000 6.53 0.00 0.00 2.52
7624 10878 7.903995 AAGTTTGTGCATCTTTGAAAAAGAA 57.096 28.000 6.53 0.00 0.00 2.52
7625 10879 7.903995 AAAGTTTGTGCATCTTTGAAAAAGA 57.096 28.000 4.99 4.99 31.47 2.52
7626 10880 8.953507 AAAAAGTTTGTGCATCTTTGAAAAAG 57.046 26.923 0.00 0.00 32.74 2.27
7633 10887 9.701355 CGAATTTTAAAAAGTTTGTGCATCTTT 57.299 25.926 4.44 0.00 33.61 2.52
7634 10888 9.092876 TCGAATTTTAAAAAGTTTGTGCATCTT 57.907 25.926 4.44 0.00 0.00 2.40
7635 10889 8.539674 GTCGAATTTTAAAAAGTTTGTGCATCT 58.460 29.630 4.44 0.00 0.00 2.90
7636 10890 7.522555 CGTCGAATTTTAAAAAGTTTGTGCATC 59.477 33.333 4.44 0.00 0.00 3.91
7637 10891 7.221067 TCGTCGAATTTTAAAAAGTTTGTGCAT 59.779 29.630 4.44 0.00 0.00 3.96
7638 10892 6.527023 TCGTCGAATTTTAAAAAGTTTGTGCA 59.473 30.769 4.44 0.00 0.00 4.57
7639 10893 6.832412 GTCGTCGAATTTTAAAAAGTTTGTGC 59.168 34.615 4.44 0.00 0.00 4.57
7640 10894 7.219344 AGGTCGTCGAATTTTAAAAAGTTTGTG 59.781 33.333 4.44 0.00 0.00 3.33
7641 10895 7.252708 AGGTCGTCGAATTTTAAAAAGTTTGT 58.747 30.769 4.44 0.00 0.00 2.83
7642 10896 7.673810 AGGTCGTCGAATTTTAAAAAGTTTG 57.326 32.000 4.44 0.34 0.00 2.93
7643 10897 9.955208 AATAGGTCGTCGAATTTTAAAAAGTTT 57.045 25.926 4.44 0.00 0.00 2.66
7644 10898 9.955208 AAATAGGTCGTCGAATTTTAAAAAGTT 57.045 25.926 4.44 0.00 0.00 2.66
7645 10899 9.603298 GAAATAGGTCGTCGAATTTTAAAAAGT 57.397 29.630 4.44 0.00 0.00 2.66
7646 10900 9.821662 AGAAATAGGTCGTCGAATTTTAAAAAG 57.178 29.630 4.44 0.31 0.00 2.27
7648 10902 9.815936 GAAGAAATAGGTCGTCGAATTTTAAAA 57.184 29.630 2.51 2.51 0.00 1.52
7649 10903 8.445493 GGAAGAAATAGGTCGTCGAATTTTAAA 58.555 33.333 0.00 0.00 0.00 1.52
7650 10904 7.603404 TGGAAGAAATAGGTCGTCGAATTTTAA 59.397 33.333 0.00 0.00 0.00 1.52
7651 10905 7.098477 TGGAAGAAATAGGTCGTCGAATTTTA 58.902 34.615 0.00 0.00 0.00 1.52
7652 10906 5.935789 TGGAAGAAATAGGTCGTCGAATTTT 59.064 36.000 0.00 0.00 0.00 1.82
7653 10907 5.484715 TGGAAGAAATAGGTCGTCGAATTT 58.515 37.500 0.00 0.00 0.00 1.82
7654 10908 5.080969 TGGAAGAAATAGGTCGTCGAATT 57.919 39.130 0.00 0.00 0.00 2.17
7655 10909 4.730949 TGGAAGAAATAGGTCGTCGAAT 57.269 40.909 0.00 0.00 0.00 3.34
7656 10910 4.240096 GTTGGAAGAAATAGGTCGTCGAA 58.760 43.478 0.00 0.00 0.00 3.71
7657 10911 3.367703 GGTTGGAAGAAATAGGTCGTCGA 60.368 47.826 0.00 0.00 0.00 4.20
7658 10912 2.928116 GGTTGGAAGAAATAGGTCGTCG 59.072 50.000 0.00 0.00 0.00 5.12
7659 10913 3.683340 GTGGTTGGAAGAAATAGGTCGTC 59.317 47.826 0.00 0.00 0.00 4.20
7660 10914 3.326880 AGTGGTTGGAAGAAATAGGTCGT 59.673 43.478 0.00 0.00 0.00 4.34
7661 10915 3.684788 CAGTGGTTGGAAGAAATAGGTCG 59.315 47.826 0.00 0.00 0.00 4.79
7662 10916 4.906618 TCAGTGGTTGGAAGAAATAGGTC 58.093 43.478 0.00 0.00 0.00 3.85
7663 10917 4.993705 TCAGTGGTTGGAAGAAATAGGT 57.006 40.909 0.00 0.00 0.00 3.08
7664 10918 5.316987 AGTTCAGTGGTTGGAAGAAATAGG 58.683 41.667 0.00 0.00 0.00 2.57
7665 10919 8.567285 AATAGTTCAGTGGTTGGAAGAAATAG 57.433 34.615 0.00 0.00 0.00 1.73
7666 10920 8.934023 AAATAGTTCAGTGGTTGGAAGAAATA 57.066 30.769 0.00 0.00 0.00 1.40
7667 10921 7.839680 AAATAGTTCAGTGGTTGGAAGAAAT 57.160 32.000 0.00 0.00 0.00 2.17
7668 10922 7.654022 AAAATAGTTCAGTGGTTGGAAGAAA 57.346 32.000 0.00 0.00 0.00 2.52
7669 10923 7.468084 CGAAAAATAGTTCAGTGGTTGGAAGAA 60.468 37.037 0.00 0.00 0.00 2.52
7670 10924 6.017440 CGAAAAATAGTTCAGTGGTTGGAAGA 60.017 38.462 0.00 0.00 0.00 2.87
7671 10925 6.017440 TCGAAAAATAGTTCAGTGGTTGGAAG 60.017 38.462 0.00 0.00 0.00 3.46
7672 10926 5.823570 TCGAAAAATAGTTCAGTGGTTGGAA 59.176 36.000 0.00 0.00 0.00 3.53
7673 10927 5.369833 TCGAAAAATAGTTCAGTGGTTGGA 58.630 37.500 0.00 0.00 0.00 3.53
7674 10928 5.682943 TCGAAAAATAGTTCAGTGGTTGG 57.317 39.130 0.00 0.00 0.00 3.77
7675 10929 8.479280 CAAATTCGAAAAATAGTTCAGTGGTTG 58.521 33.333 0.00 0.00 0.00 3.77
7676 10930 8.410141 TCAAATTCGAAAAATAGTTCAGTGGTT 58.590 29.630 0.00 0.00 0.00 3.67
7677 10931 7.860872 GTCAAATTCGAAAAATAGTTCAGTGGT 59.139 33.333 0.00 0.00 0.00 4.16
7678 10932 7.059488 CGTCAAATTCGAAAAATAGTTCAGTGG 59.941 37.037 0.00 0.00 0.00 4.00
7679 10933 7.796660 TCGTCAAATTCGAAAAATAGTTCAGTG 59.203 33.333 0.00 0.00 34.36 3.66
7680 10934 7.857569 TCGTCAAATTCGAAAAATAGTTCAGT 58.142 30.769 0.00 0.00 34.36 3.41
7681 10935 8.618952 GTTCGTCAAATTCGAAAAATAGTTCAG 58.381 33.333 0.00 0.00 46.21 3.02
7682 10936 8.339714 AGTTCGTCAAATTCGAAAAATAGTTCA 58.660 29.630 0.00 0.00 46.21 3.18
7683 10937 8.709496 AGTTCGTCAAATTCGAAAAATAGTTC 57.291 30.769 0.00 0.00 46.21 3.01
7684 10938 9.511144 AAAGTTCGTCAAATTCGAAAAATAGTT 57.489 25.926 0.00 0.00 46.21 2.24
7685 10939 9.511144 AAAAGTTCGTCAAATTCGAAAAATAGT 57.489 25.926 0.00 0.00 46.21 2.12
7688 10942 8.865001 TGAAAAAGTTCGTCAAATTCGAAAAAT 58.135 25.926 0.00 0.00 46.21 1.82
7689 10943 8.228921 TGAAAAAGTTCGTCAAATTCGAAAAA 57.771 26.923 0.00 0.00 46.21 1.94
7690 10944 7.798486 TGAAAAAGTTCGTCAAATTCGAAAA 57.202 28.000 0.00 0.00 46.21 2.29
7691 10945 7.798486 TTGAAAAAGTTCGTCAAATTCGAAA 57.202 28.000 0.00 0.00 46.21 3.46
7692 10946 7.798486 TTTGAAAAAGTTCGTCAAATTCGAA 57.202 28.000 0.00 0.00 43.41 3.71
7693 10947 7.979115 ATTTGAAAAAGTTCGTCAAATTCGA 57.021 28.000 15.80 0.00 45.27 3.71
7703 10957 7.204737 AGTTGAACGAATTTGAAAAAGTTCG 57.795 32.000 12.61 12.61 46.29 3.95
7704 10958 9.805966 AAAAGTTGAACGAATTTGAAAAAGTTC 57.194 25.926 13.01 13.01 38.60 3.01
7729 10983 9.664332 TGAGAAAAGTTCATTGAATTGGAAAAA 57.336 25.926 1.78 0.00 0.00 1.94
7730 10984 9.664332 TTGAGAAAAGTTCATTGAATTGGAAAA 57.336 25.926 1.78 0.00 0.00 2.29
7731 10985 9.835389 ATTGAGAAAAGTTCATTGAATTGGAAA 57.165 25.926 1.78 0.00 0.00 3.13
7732 10986 9.835389 AATTGAGAAAAGTTCATTGAATTGGAA 57.165 25.926 1.78 0.00 0.00 3.53
7733 10987 9.835389 AAATTGAGAAAAGTTCATTGAATTGGA 57.165 25.926 1.78 0.00 0.00 3.53
7806 11060 9.753669 GTTTGAAAAGAACGTTCAATGATTTTT 57.246 25.926 28.78 22.72 42.82 1.94
7807 11061 8.387354 GGTTTGAAAAGAACGTTCAATGATTTT 58.613 29.630 28.78 23.34 42.82 1.82
7808 11062 7.547370 TGGTTTGAAAAGAACGTTCAATGATTT 59.453 29.630 28.78 19.34 42.82 2.17
7809 11063 7.038659 TGGTTTGAAAAGAACGTTCAATGATT 58.961 30.769 28.78 15.45 42.82 2.57
7810 11064 6.568869 TGGTTTGAAAAGAACGTTCAATGAT 58.431 32.000 28.78 10.90 42.82 2.45
7811 11065 5.955488 TGGTTTGAAAAGAACGTTCAATGA 58.045 33.333 28.78 7.03 42.82 2.57
7812 11066 6.090088 TGTTGGTTTGAAAAGAACGTTCAATG 59.910 34.615 28.78 0.00 42.82 2.82
7813 11067 6.159988 TGTTGGTTTGAAAAGAACGTTCAAT 58.840 32.000 28.78 15.16 42.82 2.57
7814 11068 5.529791 TGTTGGTTTGAAAAGAACGTTCAA 58.470 33.333 28.78 12.98 41.91 2.69
7815 11069 5.122512 TGTTGGTTTGAAAAGAACGTTCA 57.877 34.783 28.78 6.94 33.21 3.18
7816 11070 6.293618 GTTTGTTGGTTTGAAAAGAACGTTC 58.706 36.000 20.71 20.71 0.00 3.95
7817 11071 5.177881 GGTTTGTTGGTTTGAAAAGAACGTT 59.822 36.000 0.00 0.00 0.00 3.99
7818 11072 4.687018 GGTTTGTTGGTTTGAAAAGAACGT 59.313 37.500 0.00 0.00 0.00 3.99
7819 11073 4.926832 AGGTTTGTTGGTTTGAAAAGAACG 59.073 37.500 0.00 0.00 0.00 3.95
7820 11074 6.795098 AAGGTTTGTTGGTTTGAAAAGAAC 57.205 33.333 0.00 0.00 0.00 3.01
7821 11075 7.809546 AAAAGGTTTGTTGGTTTGAAAAGAA 57.190 28.000 0.00 0.00 0.00 2.52
7822 11076 7.499232 TGAAAAAGGTTTGTTGGTTTGAAAAGA 59.501 29.630 0.00 0.00 0.00 2.52
7823 11077 7.643579 TGAAAAAGGTTTGTTGGTTTGAAAAG 58.356 30.769 0.00 0.00 0.00 2.27
7824 11078 7.568199 TGAAAAAGGTTTGTTGGTTTGAAAA 57.432 28.000 0.00 0.00 0.00 2.29
7825 11079 7.568199 TTGAAAAAGGTTTGTTGGTTTGAAA 57.432 28.000 0.00 0.00 0.00 2.69
7826 11080 7.568199 TTTGAAAAAGGTTTGTTGGTTTGAA 57.432 28.000 0.00 0.00 0.00 2.69
7827 11081 7.751768 ATTTGAAAAAGGTTTGTTGGTTTGA 57.248 28.000 0.00 0.00 0.00 2.69
7828 11082 8.296000 AGAATTTGAAAAAGGTTTGTTGGTTTG 58.704 29.630 0.00 0.00 0.00 2.93
7829 11083 8.402798 AGAATTTGAAAAAGGTTTGTTGGTTT 57.597 26.923 0.00 0.00 0.00 3.27
7830 11084 7.994425 AGAATTTGAAAAAGGTTTGTTGGTT 57.006 28.000 0.00 0.00 0.00 3.67
7831 11085 9.679661 AATAGAATTTGAAAAAGGTTTGTTGGT 57.320 25.926 0.00 0.00 0.00 3.67
7872 11126 8.528295 CGTCAAATTTAGAAAACGTTCAACAAT 58.472 29.630 0.00 0.00 36.09 2.71
7873 11127 7.008447 CCGTCAAATTTAGAAAACGTTCAACAA 59.992 33.333 0.00 0.00 36.09 2.83
7874 11128 6.469595 CCGTCAAATTTAGAAAACGTTCAACA 59.530 34.615 0.00 0.00 36.09 3.33
7875 11129 6.687958 TCCGTCAAATTTAGAAAACGTTCAAC 59.312 34.615 0.00 0.00 36.09 3.18
7876 11130 6.687958 GTCCGTCAAATTTAGAAAACGTTCAA 59.312 34.615 0.00 0.00 36.09 2.69
7877 11131 6.037391 AGTCCGTCAAATTTAGAAAACGTTCA 59.963 34.615 0.00 0.00 36.09 3.18
7878 11132 6.424683 AGTCCGTCAAATTTAGAAAACGTTC 58.575 36.000 0.00 0.00 0.00 3.95
7879 11133 6.259387 AGAGTCCGTCAAATTTAGAAAACGTT 59.741 34.615 0.00 0.00 0.00 3.99
7880 11134 5.756833 AGAGTCCGTCAAATTTAGAAAACGT 59.243 36.000 0.00 0.00 0.00 3.99
7881 11135 6.224420 AGAGTCCGTCAAATTTAGAAAACG 57.776 37.500 0.00 0.00 0.00 3.60
7882 11136 8.851960 AAAAGAGTCCGTCAAATTTAGAAAAC 57.148 30.769 0.00 0.00 0.00 2.43
7883 11137 9.511144 GAAAAAGAGTCCGTCAAATTTAGAAAA 57.489 29.630 0.00 0.00 0.00 2.29
7884 11138 8.679100 TGAAAAAGAGTCCGTCAAATTTAGAAA 58.321 29.630 0.00 0.00 0.00 2.52
7885 11139 8.215926 TGAAAAAGAGTCCGTCAAATTTAGAA 57.784 30.769 0.00 0.00 0.00 2.10
7886 11140 7.795482 TGAAAAAGAGTCCGTCAAATTTAGA 57.205 32.000 0.00 0.00 0.00 2.10
7887 11141 9.463443 AATTGAAAAAGAGTCCGTCAAATTTAG 57.537 29.630 0.00 0.00 32.36 1.85
8074 11349 9.695526 CATTGATTTTGTAAAGAAGTTCATCCA 57.304 29.630 5.50 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.