Multiple sequence alignment - TraesCS4A01G213900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G213900 chr4A 100.000 1637 0 0 949 2585 512021071 512019435 0.000000e+00 3024.0
1 TraesCS4A01G213900 chr4A 90.446 942 43 12 953 1890 274645281 274646179 0.000000e+00 1197.0
2 TraesCS4A01G213900 chr4A 100.000 618 0 0 1 618 512022019 512021402 0.000000e+00 1142.0
3 TraesCS4A01G213900 chr4A 88.286 350 35 3 260 603 651485048 651484699 5.150000e-112 414.0
4 TraesCS4A01G213900 chr3D 91.903 951 31 12 950 1890 124070388 124071302 0.000000e+00 1288.0
5 TraesCS4A01G213900 chr3D 91.693 951 30 12 950 1890 486147192 486146281 0.000000e+00 1273.0
6 TraesCS4A01G213900 chr3D 90.831 927 37 23 950 1869 338869955 338869070 0.000000e+00 1197.0
7 TraesCS4A01G213900 chr3D 96.429 280 7 3 260 538 486147831 486147554 2.340000e-125 459.0
8 TraesCS4A01G213900 chr3D 89.318 337 26 5 258 587 104693262 104692929 5.150000e-112 414.0
9 TraesCS4A01G213900 chr3D 95.050 101 5 0 1886 1986 142475034 142474934 2.660000e-35 159.0
10 TraesCS4A01G213900 chr3D 94.175 103 6 0 1886 1988 326584833 326584935 9.580000e-35 158.0
11 TraesCS4A01G213900 chr5B 91.109 956 34 21 950 1890 56361536 56362455 0.000000e+00 1247.0
12 TraesCS4A01G213900 chr5D 91.081 953 24 26 950 1890 53756546 53757449 0.000000e+00 1232.0
13 TraesCS4A01G213900 chr5D 91.161 939 36 12 953 1889 359547151 359548044 0.000000e+00 1230.0
14 TraesCS4A01G213900 chr5D 90.612 948 42 19 950 1890 84452287 84453194 0.000000e+00 1214.0
15 TraesCS4A01G213900 chr5D 89.958 946 35 18 950 1889 497305365 497304474 0.000000e+00 1166.0
16 TraesCS4A01G213900 chr5D 90.402 323 19 5 251 569 359546424 359546738 5.150000e-112 414.0
17 TraesCS4A01G213900 chr5D 94.898 98 5 0 1889 1986 414104566 414104469 1.240000e-33 154.0
18 TraesCS4A01G213900 chr5D 94.898 98 5 0 1886 1983 485825970 485826067 1.240000e-33 154.0
19 TraesCS4A01G213900 chr7A 90.919 947 37 24 951 1890 700256716 700257620 0.000000e+00 1227.0
20 TraesCS4A01G213900 chr7A 90.127 942 45 19 950 1890 705128353 705127459 0.000000e+00 1181.0
21 TraesCS4A01G213900 chr7A 91.483 317 20 4 260 573 705129323 705129011 1.840000e-116 429.0
22 TraesCS4A01G213900 chr7A 95.918 98 4 0 1889 1986 516500203 516500106 2.660000e-35 159.0
23 TraesCS4A01G213900 chr7A 91.818 110 8 1 1878 1986 258402718 258402609 4.460000e-33 152.0
24 TraesCS4A01G213900 chr6B 90.041 964 42 21 953 1890 43814162 43815097 0.000000e+00 1199.0
25 TraesCS4A01G213900 chr6B 88.253 979 46 21 953 1890 43836619 43837569 0.000000e+00 1107.0
26 TraesCS4A01G213900 chr4D 91.138 914 31 13 992 1889 503905588 503906467 0.000000e+00 1194.0
27 TraesCS4A01G213900 chr4D 95.470 287 12 1 2300 2585 75782882 75782596 8.430000e-125 457.0
28 TraesCS4A01G213900 chr4D 92.284 324 14 3 258 581 503904680 503904992 1.410000e-122 449.0
29 TraesCS4A01G213900 chr4D 89.130 368 28 5 258 618 4679063 4678701 5.070000e-122 448.0
30 TraesCS4A01G213900 chr4D 86.076 395 12 18 1509 1892 4669506 4669144 4.040000e-103 385.0
31 TraesCS4A01G213900 chr4D 91.279 172 13 1 14 183 75783469 75783298 1.550000e-57 233.0
32 TraesCS4A01G213900 chr4D 94.068 118 7 0 2165 2282 75782985 75782868 2.040000e-41 180.0
33 TraesCS4A01G213900 chr4D 94.898 98 5 0 1889 1986 173137652 173137555 1.240000e-33 154.0
34 TraesCS4A01G213900 chr4D 92.308 52 1 1 2010 2058 75783302 75783251 1.280000e-08 71.3
35 TraesCS4A01G213900 chr1B 88.947 950 56 14 957 1890 687186049 687185133 0.000000e+00 1127.0
36 TraesCS4A01G213900 chr1B 88.538 951 47 15 951 1889 581347922 581348822 0.000000e+00 1096.0
37 TraesCS4A01G213900 chrUn 88.947 959 43 21 967 1890 180988498 180989428 0.000000e+00 1125.0
38 TraesCS4A01G213900 chr7D 89.933 894 51 17 956 1828 437205584 437204709 0.000000e+00 1116.0
39 TraesCS4A01G213900 chr3B 88.889 936 43 14 970 1889 39642801 39643691 0.000000e+00 1096.0
40 TraesCS4A01G213900 chr3B 97.967 246 5 0 1645 1890 207186493 207186248 6.610000e-116 427.0
41 TraesCS4A01G213900 chr5A 93.579 732 26 9 950 1675 283619999 283619283 0.000000e+00 1072.0
42 TraesCS4A01G213900 chr2D 93.803 710 26 9 950 1650 543183545 543184245 0.000000e+00 1051.0
43 TraesCS4A01G213900 chr2A 88.471 824 47 19 1080 1890 702124423 702125211 0.000000e+00 952.0
44 TraesCS4A01G213900 chr4B 95.189 291 13 1 2295 2585 108350456 108350167 2.340000e-125 459.0
45 TraesCS4A01G213900 chr4B 91.279 172 13 1 14 183 108350927 108350756 1.550000e-57 233.0
46 TraesCS4A01G213900 chr4B 89.506 162 12 3 2121 2282 108350595 108350439 1.570000e-47 200.0
47 TraesCS4A01G213900 chr4B 77.515 169 15 12 2010 2156 108350760 108350593 2.130000e-11 80.5
48 TraesCS4A01G213900 chr1D 90.230 348 30 4 260 603 396219898 396219551 3.920000e-123 451.0
49 TraesCS4A01G213900 chr3A 87.571 354 34 5 257 602 711076008 711076359 4.010000e-108 401.0
50 TraesCS4A01G213900 chr3A 92.793 111 7 1 1877 1986 1906664 1906554 2.660000e-35 159.0
51 TraesCS4A01G213900 chr1A 93.396 106 6 1 1886 1991 292770728 292770832 3.440000e-34 156.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G213900 chr4A 512019435 512022019 2584 True 2083.000 3024 100.00000 1 2585 2 chr4A.!!$R2 2584
1 TraesCS4A01G213900 chr4A 274645281 274646179 898 False 1197.000 1197 90.44600 953 1890 1 chr4A.!!$F1 937
2 TraesCS4A01G213900 chr3D 124070388 124071302 914 False 1288.000 1288 91.90300 950 1890 1 chr3D.!!$F1 940
3 TraesCS4A01G213900 chr3D 338869070 338869955 885 True 1197.000 1197 90.83100 950 1869 1 chr3D.!!$R3 919
4 TraesCS4A01G213900 chr3D 486146281 486147831 1550 True 866.000 1273 94.06100 260 1890 2 chr3D.!!$R4 1630
5 TraesCS4A01G213900 chr5B 56361536 56362455 919 False 1247.000 1247 91.10900 950 1890 1 chr5B.!!$F1 940
6 TraesCS4A01G213900 chr5D 53756546 53757449 903 False 1232.000 1232 91.08100 950 1890 1 chr5D.!!$F1 940
7 TraesCS4A01G213900 chr5D 84452287 84453194 907 False 1214.000 1214 90.61200 950 1890 1 chr5D.!!$F2 940
8 TraesCS4A01G213900 chr5D 497304474 497305365 891 True 1166.000 1166 89.95800 950 1889 1 chr5D.!!$R2 939
9 TraesCS4A01G213900 chr5D 359546424 359548044 1620 False 822.000 1230 90.78150 251 1889 2 chr5D.!!$F4 1638
10 TraesCS4A01G213900 chr7A 700256716 700257620 904 False 1227.000 1227 90.91900 951 1890 1 chr7A.!!$F1 939
11 TraesCS4A01G213900 chr7A 705127459 705129323 1864 True 805.000 1181 90.80500 260 1890 2 chr7A.!!$R3 1630
12 TraesCS4A01G213900 chr6B 43814162 43815097 935 False 1199.000 1199 90.04100 953 1890 1 chr6B.!!$F1 937
13 TraesCS4A01G213900 chr6B 43836619 43837569 950 False 1107.000 1107 88.25300 953 1890 1 chr6B.!!$F2 937
14 TraesCS4A01G213900 chr4D 503904680 503906467 1787 False 821.500 1194 91.71100 258 1889 2 chr4D.!!$F1 1631
15 TraesCS4A01G213900 chr4D 75782596 75783469 873 True 235.325 457 93.28125 14 2585 4 chr4D.!!$R4 2571
16 TraesCS4A01G213900 chr1B 687185133 687186049 916 True 1127.000 1127 88.94700 957 1890 1 chr1B.!!$R1 933
17 TraesCS4A01G213900 chr1B 581347922 581348822 900 False 1096.000 1096 88.53800 951 1889 1 chr1B.!!$F1 938
18 TraesCS4A01G213900 chrUn 180988498 180989428 930 False 1125.000 1125 88.94700 967 1890 1 chrUn.!!$F1 923
19 TraesCS4A01G213900 chr7D 437204709 437205584 875 True 1116.000 1116 89.93300 956 1828 1 chr7D.!!$R1 872
20 TraesCS4A01G213900 chr3B 39642801 39643691 890 False 1096.000 1096 88.88900 970 1889 1 chr3B.!!$F1 919
21 TraesCS4A01G213900 chr5A 283619283 283619999 716 True 1072.000 1072 93.57900 950 1675 1 chr5A.!!$R1 725
22 TraesCS4A01G213900 chr2D 543183545 543184245 700 False 1051.000 1051 93.80300 950 1650 1 chr2D.!!$F1 700
23 TraesCS4A01G213900 chr2A 702124423 702125211 788 False 952.000 952 88.47100 1080 1890 1 chr2A.!!$F1 810
24 TraesCS4A01G213900 chr4B 108350167 108350927 760 True 243.125 459 88.37225 14 2585 4 chr4B.!!$R1 2571

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
225 228 1.61785 AGACTGAGAACAGCACCAGAG 59.382 52.381 0.0 0.0 46.95 3.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1899 3053 0.03101 CCTCTAGCCTACCCCACCTT 60.031 60.0 0.0 0.0 0.0 3.5 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 4.792068 TCTGAATATTGGGGCTTTGTAGG 58.208 43.478 0.00 0.00 0.00 3.18
52 55 5.258051 TGGGGCTTTGTAGGTGTTATAAAG 58.742 41.667 0.00 0.00 41.09 1.85
73 76 4.726583 AGGGGTTTTGGAAACTTACTCTC 58.273 43.478 3.85 0.00 0.00 3.20
125 128 2.894126 TCTCAACTCTCAAGACAGGGTC 59.106 50.000 0.00 0.00 0.00 4.46
126 129 2.630098 CTCAACTCTCAAGACAGGGTCA 59.370 50.000 0.00 0.00 34.60 4.02
182 185 2.042464 ACTGAGAACAGCACCAGAGAA 58.958 47.619 0.00 0.00 46.95 2.87
183 186 2.224161 ACTGAGAACAGCACCAGAGAAC 60.224 50.000 0.00 0.00 46.95 3.01
184 187 1.762370 TGAGAACAGCACCAGAGAACA 59.238 47.619 0.00 0.00 0.00 3.18
185 188 2.170397 TGAGAACAGCACCAGAGAACAA 59.830 45.455 0.00 0.00 0.00 2.83
186 189 2.545946 GAGAACAGCACCAGAGAACAAC 59.454 50.000 0.00 0.00 0.00 3.32
187 190 2.092968 AGAACAGCACCAGAGAACAACA 60.093 45.455 0.00 0.00 0.00 3.33
188 191 2.418368 ACAGCACCAGAGAACAACAA 57.582 45.000 0.00 0.00 0.00 2.83
189 192 2.017049 ACAGCACCAGAGAACAACAAC 58.983 47.619 0.00 0.00 0.00 3.32
190 193 2.016318 CAGCACCAGAGAACAACAACA 58.984 47.619 0.00 0.00 0.00 3.33
191 194 2.423185 CAGCACCAGAGAACAACAACAA 59.577 45.455 0.00 0.00 0.00 2.83
192 195 2.423538 AGCACCAGAGAACAACAACAAC 59.576 45.455 0.00 0.00 0.00 3.32
193 196 2.163412 GCACCAGAGAACAACAACAACA 59.837 45.455 0.00 0.00 0.00 3.33
194 197 3.366883 GCACCAGAGAACAACAACAACAA 60.367 43.478 0.00 0.00 0.00 2.83
195 198 4.165779 CACCAGAGAACAACAACAACAAC 58.834 43.478 0.00 0.00 0.00 3.32
196 199 3.823873 ACCAGAGAACAACAACAACAACA 59.176 39.130 0.00 0.00 0.00 3.33
197 200 4.279671 ACCAGAGAACAACAACAACAACAA 59.720 37.500 0.00 0.00 0.00 2.83
198 201 5.221342 ACCAGAGAACAACAACAACAACAAA 60.221 36.000 0.00 0.00 0.00 2.83
199 202 5.345741 CCAGAGAACAACAACAACAACAAAG 59.654 40.000 0.00 0.00 0.00 2.77
200 203 4.923281 AGAGAACAACAACAACAACAAAGC 59.077 37.500 0.00 0.00 0.00 3.51
201 204 3.993736 AGAACAACAACAACAACAAAGCC 59.006 39.130 0.00 0.00 0.00 4.35
202 205 3.676291 ACAACAACAACAACAAAGCCT 57.324 38.095 0.00 0.00 0.00 4.58
203 206 4.001618 ACAACAACAACAACAAAGCCTT 57.998 36.364 0.00 0.00 0.00 4.35
204 207 4.384940 ACAACAACAACAACAAAGCCTTT 58.615 34.783 0.00 0.00 0.00 3.11
205 208 5.542779 ACAACAACAACAACAAAGCCTTTA 58.457 33.333 0.00 0.00 0.00 1.85
206 209 5.637387 ACAACAACAACAACAAAGCCTTTAG 59.363 36.000 0.00 0.00 0.00 1.85
207 210 5.652994 ACAACAACAACAAAGCCTTTAGA 57.347 34.783 0.00 0.00 0.00 2.10
208 211 5.407502 ACAACAACAACAAAGCCTTTAGAC 58.592 37.500 0.00 0.00 0.00 2.59
209 212 5.185056 ACAACAACAACAAAGCCTTTAGACT 59.815 36.000 0.00 0.00 0.00 3.24
210 213 5.248870 ACAACAACAAAGCCTTTAGACTG 57.751 39.130 0.00 0.00 0.00 3.51
211 214 4.947388 ACAACAACAAAGCCTTTAGACTGA 59.053 37.500 0.00 0.00 0.00 3.41
212 215 5.066505 ACAACAACAAAGCCTTTAGACTGAG 59.933 40.000 0.00 0.00 0.00 3.35
213 216 5.036117 ACAACAAAGCCTTTAGACTGAGA 57.964 39.130 0.00 0.00 0.00 3.27
214 217 5.437060 ACAACAAAGCCTTTAGACTGAGAA 58.563 37.500 0.00 0.00 0.00 2.87
215 218 5.297029 ACAACAAAGCCTTTAGACTGAGAAC 59.703 40.000 0.00 0.00 0.00 3.01
216 219 5.036117 ACAAAGCCTTTAGACTGAGAACA 57.964 39.130 0.00 0.00 0.00 3.18
218 221 3.326836 AGCCTTTAGACTGAGAACAGC 57.673 47.619 0.00 0.00 46.95 4.40
219 222 2.634940 AGCCTTTAGACTGAGAACAGCA 59.365 45.455 0.00 0.00 46.95 4.41
220 223 2.739379 GCCTTTAGACTGAGAACAGCAC 59.261 50.000 0.00 0.00 46.95 4.40
221 224 3.330267 CCTTTAGACTGAGAACAGCACC 58.670 50.000 0.00 0.00 46.95 5.01
225 228 1.617850 AGACTGAGAACAGCACCAGAG 59.382 52.381 0.00 0.00 46.95 3.35
228 231 2.224161 ACTGAGAACAGCACCAGAGAAC 60.224 50.000 0.00 0.00 46.95 3.01
229 232 1.762370 TGAGAACAGCACCAGAGAACA 59.238 47.619 0.00 0.00 0.00 3.18
230 233 2.170397 TGAGAACAGCACCAGAGAACAA 59.830 45.455 0.00 0.00 0.00 2.83
231 234 2.545946 GAGAACAGCACCAGAGAACAAC 59.454 50.000 0.00 0.00 0.00 3.32
234 237 2.017049 ACAGCACCAGAGAACAACAAC 58.983 47.619 0.00 0.00 0.00 3.32
239 242 3.366883 GCACCAGAGAACAACAACAACAA 60.367 43.478 0.00 0.00 0.00 2.83
240 243 4.165779 CACCAGAGAACAACAACAACAAC 58.834 43.478 0.00 0.00 0.00 3.32
243 246 4.621034 CCAGAGAACAACAACAACAACAAC 59.379 41.667 0.00 0.00 0.00 3.32
246 249 5.689961 AGAGAACAACAACAACAACAACAAC 59.310 36.000 0.00 0.00 0.00 3.32
249 252 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
256 259 3.676291 ACAACAACAACAACAAAGCCT 57.324 38.095 0.00 0.00 0.00 4.58
612 1317 3.814268 CCCGCCGCTGTTTCCATG 61.814 66.667 0.00 0.00 0.00 3.66
613 1318 4.481112 CCGCCGCTGTTTCCATGC 62.481 66.667 0.00 0.00 0.00 4.06
614 1319 3.434319 CGCCGCTGTTTCCATGCT 61.434 61.111 0.00 0.00 0.00 3.79
615 1320 2.180017 GCCGCTGTTTCCATGCTG 59.820 61.111 0.00 0.00 0.00 4.41
616 1321 2.180017 CCGCTGTTTCCATGCTGC 59.820 61.111 0.00 0.00 0.00 5.25
617 1322 2.180017 CGCTGTTTCCATGCTGCC 59.820 61.111 0.00 0.00 0.00 4.85
1294 2327 1.067495 AGAAGAAGACGAAGAAGCCGG 60.067 52.381 0.00 0.00 0.00 6.13
1582 2664 2.363680 CAGTTCCATAGCTCCGATGAGT 59.636 50.000 0.00 0.00 40.95 3.41
1586 2668 3.833732 TCCATAGCTCCGATGAGTAGTT 58.166 45.455 0.00 0.00 40.95 2.24
1587 2669 4.215908 TCCATAGCTCCGATGAGTAGTTT 58.784 43.478 0.00 0.00 40.95 2.66
1588 2670 5.382616 TCCATAGCTCCGATGAGTAGTTTA 58.617 41.667 0.00 0.00 40.95 2.01
1589 2671 6.010850 TCCATAGCTCCGATGAGTAGTTTAT 58.989 40.000 0.00 0.00 40.95 1.40
1590 2672 6.151312 TCCATAGCTCCGATGAGTAGTTTATC 59.849 42.308 0.00 0.00 40.95 1.75
1591 2673 6.151985 CCATAGCTCCGATGAGTAGTTTATCT 59.848 42.308 0.00 0.00 40.95 1.98
1592 2674 7.337184 CCATAGCTCCGATGAGTAGTTTATCTA 59.663 40.741 0.00 0.00 40.95 1.98
1593 2675 6.811253 AGCTCCGATGAGTAGTTTATCTAG 57.189 41.667 0.00 0.00 40.95 2.43
1594 2676 6.300703 AGCTCCGATGAGTAGTTTATCTAGT 58.699 40.000 0.00 0.00 40.95 2.57
1595 2677 7.451732 AGCTCCGATGAGTAGTTTATCTAGTA 58.548 38.462 0.00 0.00 40.95 1.82
1596 2678 7.604927 AGCTCCGATGAGTAGTTTATCTAGTAG 59.395 40.741 0.00 0.00 40.95 2.57
1597 2679 7.388500 GCTCCGATGAGTAGTTTATCTAGTAGT 59.612 40.741 0.00 0.00 40.95 2.73
1598 2680 9.275398 CTCCGATGAGTAGTTTATCTAGTAGTT 57.725 37.037 0.00 0.00 32.96 2.24
1599 2681 9.270640 TCCGATGAGTAGTTTATCTAGTAGTTC 57.729 37.037 0.00 0.00 32.96 3.01
1600 2682 9.275398 CCGATGAGTAGTTTATCTAGTAGTTCT 57.725 37.037 0.00 0.00 32.96 3.01
1603 2685 8.659925 TGAGTAGTTTATCTAGTAGTTCTCGG 57.340 38.462 0.00 0.00 32.96 4.63
1604 2686 8.481314 TGAGTAGTTTATCTAGTAGTTCTCGGA 58.519 37.037 0.00 0.00 32.96 4.55
1605 2687 8.891671 AGTAGTTTATCTAGTAGTTCTCGGAG 57.108 38.462 0.00 0.00 31.22 4.63
1606 2688 8.485392 AGTAGTTTATCTAGTAGTTCTCGGAGT 58.515 37.037 4.69 0.00 31.22 3.85
1623 2736 8.659925 TCTCGGAGTAGTTTATCTAGTAGTTG 57.340 38.462 4.69 0.00 32.96 3.16
1624 2737 8.481314 TCTCGGAGTAGTTTATCTAGTAGTTGA 58.519 37.037 4.69 0.00 32.96 3.18
1626 2739 9.107177 TCGGAGTAGTTTATCTAGTAGTTGAAG 57.893 37.037 0.00 0.00 32.96 3.02
1893 3047 4.862902 TCTATTGGAGATGCTCTAGTGC 57.137 45.455 9.86 9.86 0.00 4.40
1894 3048 2.926778 ATTGGAGATGCTCTAGTGCC 57.073 50.000 13.91 0.00 0.00 5.01
1895 3049 1.571955 TTGGAGATGCTCTAGTGCCA 58.428 50.000 13.91 1.86 0.00 4.92
1896 3050 1.571955 TGGAGATGCTCTAGTGCCAA 58.428 50.000 13.91 0.00 0.00 4.52
1897 3051 1.908619 TGGAGATGCTCTAGTGCCAAA 59.091 47.619 13.91 0.00 0.00 3.28
1898 3052 2.284190 GGAGATGCTCTAGTGCCAAAC 58.716 52.381 13.91 4.01 0.00 2.93
1899 3053 2.355108 GGAGATGCTCTAGTGCCAAACA 60.355 50.000 13.91 0.00 0.00 2.83
1900 3054 3.338249 GAGATGCTCTAGTGCCAAACAA 58.662 45.455 13.91 0.00 0.00 2.83
1901 3055 3.341823 AGATGCTCTAGTGCCAAACAAG 58.658 45.455 13.91 0.00 0.00 3.16
1902 3056 1.896220 TGCTCTAGTGCCAAACAAGG 58.104 50.000 13.91 0.00 0.00 3.61
1903 3057 1.142870 TGCTCTAGTGCCAAACAAGGT 59.857 47.619 13.91 0.00 0.00 3.50
1904 3058 1.537202 GCTCTAGTGCCAAACAAGGTG 59.463 52.381 5.45 0.00 0.00 4.00
1905 3059 2.154462 CTCTAGTGCCAAACAAGGTGG 58.846 52.381 0.00 0.00 39.33 4.61
1906 3060 1.202879 TCTAGTGCCAAACAAGGTGGG 60.203 52.381 0.00 0.00 36.58 4.61
1907 3061 0.178975 TAGTGCCAAACAAGGTGGGG 60.179 55.000 0.00 0.00 36.58 4.96
1908 3062 1.760480 GTGCCAAACAAGGTGGGGT 60.760 57.895 0.00 0.00 36.58 4.95
1909 3063 0.468400 GTGCCAAACAAGGTGGGGTA 60.468 55.000 0.00 0.00 36.58 3.69
1910 3064 0.178975 TGCCAAACAAGGTGGGGTAG 60.179 55.000 0.00 0.00 36.58 3.18
1911 3065 0.898326 GCCAAACAAGGTGGGGTAGG 60.898 60.000 0.00 0.00 36.58 3.18
1912 3066 0.898326 CCAAACAAGGTGGGGTAGGC 60.898 60.000 0.00 0.00 32.03 3.93
1913 3067 0.112412 CAAACAAGGTGGGGTAGGCT 59.888 55.000 0.00 0.00 0.00 4.58
1914 3068 1.353022 CAAACAAGGTGGGGTAGGCTA 59.647 52.381 0.00 0.00 0.00 3.93
1915 3069 1.286248 AACAAGGTGGGGTAGGCTAG 58.714 55.000 0.00 0.00 0.00 3.42
1916 3070 0.416231 ACAAGGTGGGGTAGGCTAGA 59.584 55.000 0.00 0.00 0.00 2.43
1917 3071 1.123928 CAAGGTGGGGTAGGCTAGAG 58.876 60.000 0.00 0.00 0.00 2.43
1918 3072 0.031010 AAGGTGGGGTAGGCTAGAGG 60.031 60.000 0.00 0.00 0.00 3.69
1919 3073 1.229626 AGGTGGGGTAGGCTAGAGGT 61.230 60.000 0.00 0.00 0.00 3.85
1920 3074 1.049289 GGTGGGGTAGGCTAGAGGTG 61.049 65.000 0.00 0.00 0.00 4.00
1921 3075 0.032416 GTGGGGTAGGCTAGAGGTGA 60.032 60.000 0.00 0.00 0.00 4.02
1922 3076 0.714180 TGGGGTAGGCTAGAGGTGAA 59.286 55.000 0.00 0.00 0.00 3.18
1923 3077 1.079825 TGGGGTAGGCTAGAGGTGAAA 59.920 52.381 0.00 0.00 0.00 2.69
1924 3078 1.485480 GGGGTAGGCTAGAGGTGAAAC 59.515 57.143 0.00 0.00 0.00 2.78
1940 3094 4.755411 GTGAAACCCATAAGATCTCGTGA 58.245 43.478 0.00 0.00 0.00 4.35
1941 3095 4.567159 GTGAAACCCATAAGATCTCGTGAC 59.433 45.833 0.00 0.00 0.00 3.67
1942 3096 3.821421 AACCCATAAGATCTCGTGACC 57.179 47.619 0.00 0.00 0.00 4.02
1943 3097 2.747177 ACCCATAAGATCTCGTGACCA 58.253 47.619 0.00 0.00 0.00 4.02
1944 3098 3.104512 ACCCATAAGATCTCGTGACCAA 58.895 45.455 0.00 0.00 0.00 3.67
1945 3099 3.118738 ACCCATAAGATCTCGTGACCAAC 60.119 47.826 0.00 0.00 0.00 3.77
1946 3100 3.133003 CCCATAAGATCTCGTGACCAACT 59.867 47.826 0.00 0.00 0.00 3.16
1947 3101 4.363999 CCATAAGATCTCGTGACCAACTC 58.636 47.826 0.00 0.00 0.00 3.01
1948 3102 4.142160 CCATAAGATCTCGTGACCAACTCA 60.142 45.833 0.00 0.00 0.00 3.41
1949 3103 5.452496 CCATAAGATCTCGTGACCAACTCAT 60.452 44.000 0.00 0.00 0.00 2.90
1950 3104 3.516981 AGATCTCGTGACCAACTCATG 57.483 47.619 0.00 0.00 37.26 3.07
1961 3115 3.417069 CCAACTCATGGTTCTGGTACA 57.583 47.619 0.00 0.00 44.85 2.90
1962 3116 3.955471 CCAACTCATGGTTCTGGTACAT 58.045 45.455 0.00 0.00 44.85 2.29
1963 3117 3.691118 CCAACTCATGGTTCTGGTACATG 59.309 47.826 0.00 0.00 44.85 3.21
1964 3118 3.634397 ACTCATGGTTCTGGTACATGG 57.366 47.619 0.00 0.00 41.64 3.66
1965 3119 3.181329 ACTCATGGTTCTGGTACATGGA 58.819 45.455 0.00 0.00 41.64 3.41
1966 3120 3.782523 ACTCATGGTTCTGGTACATGGAT 59.217 43.478 0.00 0.00 41.64 3.41
1967 3121 4.968719 ACTCATGGTTCTGGTACATGGATA 59.031 41.667 0.00 0.00 41.64 2.59
1968 3122 5.070981 ACTCATGGTTCTGGTACATGGATAG 59.929 44.000 0.00 0.00 41.64 2.08
1969 3123 3.838244 TGGTTCTGGTACATGGATAGC 57.162 47.619 0.00 0.00 38.20 2.97
1970 3124 3.111484 TGGTTCTGGTACATGGATAGCA 58.889 45.455 0.00 0.00 38.20 3.49
1971 3125 3.521531 TGGTTCTGGTACATGGATAGCAA 59.478 43.478 0.00 0.00 38.20 3.91
1972 3126 4.130118 GGTTCTGGTACATGGATAGCAAG 58.870 47.826 0.00 0.00 38.20 4.01
1973 3127 3.475566 TCTGGTACATGGATAGCAAGC 57.524 47.619 0.00 0.00 38.20 4.01
1974 3128 3.041211 TCTGGTACATGGATAGCAAGCT 58.959 45.455 0.00 0.00 38.20 3.74
1975 3129 3.455910 TCTGGTACATGGATAGCAAGCTT 59.544 43.478 0.00 0.00 38.20 3.74
1976 3130 3.808728 TGGTACATGGATAGCAAGCTTC 58.191 45.455 0.00 0.00 29.82 3.86
1977 3131 3.142174 GGTACATGGATAGCAAGCTTCC 58.858 50.000 0.00 7.95 0.00 3.46
1978 3132 3.433598 GGTACATGGATAGCAAGCTTCCA 60.434 47.826 20.33 20.33 43.37 3.53
1979 3133 2.648059 ACATGGATAGCAAGCTTCCAC 58.352 47.619 20.41 0.00 42.09 4.02
1980 3134 1.600957 CATGGATAGCAAGCTTCCACG 59.399 52.381 20.41 13.24 42.09 4.94
1981 3135 0.744414 TGGATAGCAAGCTTCCACGC 60.744 55.000 16.61 0.00 34.65 5.34
1982 3136 0.744414 GGATAGCAAGCTTCCACGCA 60.744 55.000 8.96 0.00 0.00 5.24
1983 3137 1.086696 GATAGCAAGCTTCCACGCAA 58.913 50.000 8.96 0.00 0.00 4.85
1984 3138 0.804989 ATAGCAAGCTTCCACGCAAC 59.195 50.000 8.96 0.00 0.00 4.17
1985 3139 1.234615 TAGCAAGCTTCCACGCAACC 61.235 55.000 8.96 0.00 0.00 3.77
1986 3140 2.844451 GCAAGCTTCCACGCAACCA 61.844 57.895 0.00 0.00 0.00 3.67
1987 3141 1.959085 CAAGCTTCCACGCAACCAT 59.041 52.632 0.00 0.00 0.00 3.55
1988 3142 0.314935 CAAGCTTCCACGCAACCATT 59.685 50.000 0.00 0.00 0.00 3.16
1989 3143 0.314935 AAGCTTCCACGCAACCATTG 59.685 50.000 0.00 0.00 0.00 2.82
1990 3144 0.823356 AGCTTCCACGCAACCATTGT 60.823 50.000 0.00 0.00 0.00 2.71
1991 3145 0.031994 GCTTCCACGCAACCATTGTT 59.968 50.000 0.00 0.00 34.14 2.83
1992 3146 1.537990 GCTTCCACGCAACCATTGTTT 60.538 47.619 0.00 0.00 30.42 2.83
1993 3147 2.126467 CTTCCACGCAACCATTGTTTG 58.874 47.619 0.00 0.00 30.42 2.93
1994 3148 1.107114 TCCACGCAACCATTGTTTGT 58.893 45.000 0.00 0.00 30.42 2.83
1995 3149 1.478510 TCCACGCAACCATTGTTTGTT 59.521 42.857 0.00 0.00 30.42 2.83
1996 3150 2.688446 TCCACGCAACCATTGTTTGTTA 59.312 40.909 0.00 0.00 30.42 2.41
1997 3151 2.792116 CCACGCAACCATTGTTTGTTAC 59.208 45.455 0.00 0.00 30.42 2.50
1998 3152 3.490078 CCACGCAACCATTGTTTGTTACT 60.490 43.478 0.00 0.00 30.42 2.24
1999 3153 4.109050 CACGCAACCATTGTTTGTTACTT 58.891 39.130 0.00 0.00 30.42 2.24
2000 3154 4.206200 CACGCAACCATTGTTTGTTACTTC 59.794 41.667 0.00 0.00 30.42 3.01
2001 3155 4.142359 ACGCAACCATTGTTTGTTACTTCA 60.142 37.500 0.00 0.00 30.42 3.02
2002 3156 4.981674 CGCAACCATTGTTTGTTACTTCAT 59.018 37.500 0.00 0.00 30.42 2.57
2003 3157 5.116983 CGCAACCATTGTTTGTTACTTCATC 59.883 40.000 0.00 0.00 30.42 2.92
2004 3158 5.405269 GCAACCATTGTTTGTTACTTCATCC 59.595 40.000 0.00 0.00 30.42 3.51
2005 3159 6.511416 CAACCATTGTTTGTTACTTCATCCA 58.489 36.000 0.00 0.00 30.42 3.41
2006 3160 6.084326 ACCATTGTTTGTTACTTCATCCAC 57.916 37.500 0.00 0.00 0.00 4.02
2007 3161 5.153513 CCATTGTTTGTTACTTCATCCACG 58.846 41.667 0.00 0.00 0.00 4.94
2008 3162 5.278266 CCATTGTTTGTTACTTCATCCACGT 60.278 40.000 0.00 0.00 0.00 4.49
2009 3163 4.804608 TGTTTGTTACTTCATCCACGTG 57.195 40.909 9.08 9.08 0.00 4.49
2010 3164 4.443621 TGTTTGTTACTTCATCCACGTGA 58.556 39.130 19.30 3.36 0.00 4.35
2011 3165 4.509970 TGTTTGTTACTTCATCCACGTGAG 59.490 41.667 19.30 8.50 0.00 3.51
2012 3166 4.594123 TTGTTACTTCATCCACGTGAGA 57.406 40.909 19.30 13.16 0.00 3.27
2013 3167 4.594123 TGTTACTTCATCCACGTGAGAA 57.406 40.909 19.30 16.14 0.00 2.87
2014 3168 4.556233 TGTTACTTCATCCACGTGAGAAG 58.444 43.478 28.08 28.08 42.32 2.85
2015 3169 4.279922 TGTTACTTCATCCACGTGAGAAGA 59.720 41.667 32.52 21.81 39.78 2.87
2016 3170 5.047306 TGTTACTTCATCCACGTGAGAAGAT 60.047 40.000 32.52 23.81 39.78 2.40
2017 3171 6.152154 TGTTACTTCATCCACGTGAGAAGATA 59.848 38.462 32.52 23.18 39.78 1.98
2018 3172 5.661056 ACTTCATCCACGTGAGAAGATAA 57.339 39.130 32.52 10.57 39.78 1.75
2019 3173 6.037786 ACTTCATCCACGTGAGAAGATAAA 57.962 37.500 32.52 15.85 39.78 1.40
2020 3174 5.869888 ACTTCATCCACGTGAGAAGATAAAC 59.130 40.000 32.52 0.00 39.78 2.01
2021 3175 4.421058 TCATCCACGTGAGAAGATAAACG 58.579 43.478 19.30 0.00 41.64 3.60
2022 3176 4.157105 TCATCCACGTGAGAAGATAAACGA 59.843 41.667 19.30 0.69 39.27 3.85
2023 3177 4.508461 TCCACGTGAGAAGATAAACGAA 57.492 40.909 19.30 0.00 39.27 3.85
2024 3178 4.873817 TCCACGTGAGAAGATAAACGAAA 58.126 39.130 19.30 0.00 39.27 3.46
2025 3179 5.475719 TCCACGTGAGAAGATAAACGAAAT 58.524 37.500 19.30 0.00 39.27 2.17
2026 3180 6.623486 TCCACGTGAGAAGATAAACGAAATA 58.377 36.000 19.30 0.00 39.27 1.40
2027 3181 7.092079 TCCACGTGAGAAGATAAACGAAATAA 58.908 34.615 19.30 0.00 39.27 1.40
2028 3182 7.062605 TCCACGTGAGAAGATAAACGAAATAAC 59.937 37.037 19.30 0.00 39.27 1.89
2029 3183 7.148705 CCACGTGAGAAGATAAACGAAATAACA 60.149 37.037 19.30 0.00 39.27 2.41
2030 3184 8.380644 CACGTGAGAAGATAAACGAAATAACAT 58.619 33.333 10.90 0.00 39.27 2.71
2031 3185 8.380644 ACGTGAGAAGATAAACGAAATAACATG 58.619 33.333 0.57 0.00 39.27 3.21
2032 3186 8.592155 CGTGAGAAGATAAACGAAATAACATGA 58.408 33.333 0.00 0.00 38.27 3.07
2061 3215 9.988350 AATAATACTTCATTCACGTGAAATGAC 57.012 29.630 32.69 0.00 37.63 3.06
2062 3216 7.433708 AATACTTCATTCACGTGAAATGACA 57.566 32.000 32.69 20.82 37.63 3.58
2063 3217 5.947228 ACTTCATTCACGTGAAATGACAT 57.053 34.783 32.69 20.88 37.63 3.06
2064 3218 5.692814 ACTTCATTCACGTGAAATGACATG 58.307 37.500 32.69 24.15 37.63 3.21
2065 3219 5.469760 ACTTCATTCACGTGAAATGACATGA 59.530 36.000 32.69 25.83 37.63 3.07
2066 3220 5.938438 TCATTCACGTGAAATGACATGAA 57.062 34.783 32.69 13.25 37.61 2.57
2067 3221 6.311055 TCATTCACGTGAAATGACATGAAA 57.689 33.333 32.69 7.85 37.61 2.69
2068 3222 6.733145 TCATTCACGTGAAATGACATGAAAA 58.267 32.000 32.69 7.64 37.61 2.29
2069 3223 7.199078 TCATTCACGTGAAATGACATGAAAAA 58.801 30.769 32.69 7.17 37.61 1.94
2070 3224 7.866898 TCATTCACGTGAAATGACATGAAAAAT 59.133 29.630 32.69 10.05 37.61 1.82
2071 3225 9.127006 CATTCACGTGAAATGACATGAAAAATA 57.873 29.630 32.69 6.08 37.61 1.40
2072 3226 9.859427 ATTCACGTGAAATGACATGAAAAATAT 57.141 25.926 32.69 9.01 37.61 1.28
2073 3227 8.672214 TCACGTGAAATGACATGAAAAATATG 57.328 30.769 17.62 0.00 0.00 1.78
2074 3228 8.296000 TCACGTGAAATGACATGAAAAATATGT 58.704 29.630 17.62 0.00 41.21 2.29
2075 3229 8.367396 CACGTGAAATGACATGAAAAATATGTG 58.633 33.333 10.90 0.00 38.78 3.21
2076 3230 8.081633 ACGTGAAATGACATGAAAAATATGTGT 58.918 29.630 0.00 0.00 38.78 3.72
2077 3231 8.914654 CGTGAAATGACATGAAAAATATGTGTT 58.085 29.630 0.00 0.00 38.78 3.32
2151 3305 8.856490 AACATCTTGTTTGTTACTTCATTCAC 57.144 30.769 0.00 0.00 37.26 3.18
2152 3306 7.132213 ACATCTTGTTTGTTACTTCATTCACG 58.868 34.615 0.00 0.00 0.00 4.35
2153 3307 6.671614 TCTTGTTTGTTACTTCATTCACGT 57.328 33.333 0.00 0.00 0.00 4.49
2154 3308 6.482835 TCTTGTTTGTTACTTCATTCACGTG 58.517 36.000 9.94 9.94 0.00 4.49
2155 3309 6.314152 TCTTGTTTGTTACTTCATTCACGTGA 59.686 34.615 15.76 15.76 0.00 4.35
2156 3310 6.612247 TGTTTGTTACTTCATTCACGTGAT 57.388 33.333 20.80 5.63 0.00 3.06
2157 3311 6.426327 TGTTTGTTACTTCATTCACGTGATG 58.574 36.000 20.80 18.37 0.00 3.07
2158 3312 5.605564 TTGTTACTTCATTCACGTGATGG 57.394 39.130 20.80 14.49 0.00 3.51
2159 3313 4.888917 TGTTACTTCATTCACGTGATGGA 58.111 39.130 20.80 16.64 0.00 3.41
2160 3314 4.929211 TGTTACTTCATTCACGTGATGGAG 59.071 41.667 20.80 22.60 0.00 3.86
2161 3315 3.685139 ACTTCATTCACGTGATGGAGT 57.315 42.857 24.47 24.47 0.00 3.85
2162 3316 4.801330 ACTTCATTCACGTGATGGAGTA 57.199 40.909 26.83 12.43 0.00 2.59
2163 3317 4.495422 ACTTCATTCACGTGATGGAGTAC 58.505 43.478 26.83 0.00 0.00 2.73
2164 3318 4.220821 ACTTCATTCACGTGATGGAGTACT 59.779 41.667 26.83 12.64 0.00 2.73
2165 3319 5.417894 ACTTCATTCACGTGATGGAGTACTA 59.582 40.000 26.83 10.60 0.00 1.82
2166 3320 5.244785 TCATTCACGTGATGGAGTACTAC 57.755 43.478 20.80 0.00 0.00 2.73
2167 3321 3.752412 TTCACGTGATGGAGTACTACG 57.248 47.619 20.80 12.40 40.30 3.51
2169 3323 3.860641 TCACGTGATGGAGTACTACGTA 58.139 45.455 15.76 6.82 44.98 3.57
2170 3324 4.445453 TCACGTGATGGAGTACTACGTAT 58.555 43.478 15.76 0.00 44.98 3.06
2171 3325 4.877823 TCACGTGATGGAGTACTACGTATT 59.122 41.667 15.76 0.00 44.98 1.89
2172 3326 5.355071 TCACGTGATGGAGTACTACGTATTT 59.645 40.000 15.76 0.00 44.98 1.40
2173 3327 6.538381 TCACGTGATGGAGTACTACGTATTTA 59.462 38.462 15.76 4.72 44.98 1.40
2174 3328 6.630443 CACGTGATGGAGTACTACGTATTTAC 59.370 42.308 17.71 6.86 44.98 2.01
2175 3329 6.540189 ACGTGATGGAGTACTACGTATTTACT 59.460 38.462 16.89 14.01 44.93 2.24
2176 3330 7.710907 ACGTGATGGAGTACTACGTATTTACTA 59.289 37.037 16.89 4.17 44.93 1.82
2177 3331 8.006590 CGTGATGGAGTACTACGTATTTACTAC 58.993 40.741 15.39 15.39 0.00 2.73
2178 3332 9.050601 GTGATGGAGTACTACGTATTTACTACT 57.949 37.037 19.93 6.93 29.24 2.57
2179 3333 9.265901 TGATGGAGTACTACGTATTTACTACTC 57.734 37.037 19.93 13.30 33.24 2.59
2180 3334 8.614469 ATGGAGTACTACGTATTTACTACTCC 57.386 38.462 18.72 18.72 43.54 3.85
2181 3335 7.796054 TGGAGTACTACGTATTTACTACTCCT 58.204 38.462 22.82 3.99 43.58 3.69
2182 3336 7.712639 TGGAGTACTACGTATTTACTACTCCTG 59.287 40.741 22.82 2.38 43.58 3.86
2183 3337 7.713073 GGAGTACTACGTATTTACTACTCCTGT 59.287 40.741 18.45 3.82 41.90 4.00
2184 3338 8.430801 AGTACTACGTATTTACTACTCCTGTG 57.569 38.462 12.95 0.00 0.00 3.66
2185 3339 6.690194 ACTACGTATTTACTACTCCTGTGG 57.310 41.667 0.00 0.00 0.00 4.17
2186 3340 6.418101 ACTACGTATTTACTACTCCTGTGGA 58.582 40.000 0.00 0.00 0.00 4.02
2198 3352 3.804036 CTCCTGTGGAGTAACAAACACA 58.196 45.455 5.50 0.00 44.25 3.72
2199 3353 4.196193 CTCCTGTGGAGTAACAAACACAA 58.804 43.478 5.50 0.00 44.25 3.33
2200 3354 4.196193 TCCTGTGGAGTAACAAACACAAG 58.804 43.478 0.00 0.00 42.55 3.16
2201 3355 3.945285 CCTGTGGAGTAACAAACACAAGT 59.055 43.478 0.00 0.00 42.55 3.16
2202 3356 4.398044 CCTGTGGAGTAACAAACACAAGTT 59.602 41.667 0.00 0.00 42.55 2.66
2203 3357 8.968055 CTCCTGTGGAGTAACAAACACAAGTTT 61.968 40.741 5.50 0.00 44.98 2.66
2204 3358 5.945155 TGTGGAGTAACAAACACAAGTTTC 58.055 37.500 0.00 0.00 45.80 2.78
2205 3359 5.106078 TGTGGAGTAACAAACACAAGTTTCC 60.106 40.000 0.00 0.00 45.80 3.13
2206 3360 5.124936 GTGGAGTAACAAACACAAGTTTCCT 59.875 40.000 0.00 0.00 45.80 3.36
2207 3361 6.316890 GTGGAGTAACAAACACAAGTTTCCTA 59.683 38.462 0.00 0.00 45.80 2.94
2208 3362 6.316890 TGGAGTAACAAACACAAGTTTCCTAC 59.683 38.462 0.00 0.00 45.80 3.18
2209 3363 6.541278 GGAGTAACAAACACAAGTTTCCTACT 59.459 38.462 9.58 9.58 45.80 2.57
2210 3364 7.254692 GGAGTAACAAACACAAGTTTCCTACTC 60.255 40.741 19.09 19.09 45.80 2.59
2211 3365 7.107542 AGTAACAAACACAAGTTTCCTACTCA 58.892 34.615 0.00 0.00 45.80 3.41
2212 3366 6.827586 AACAAACACAAGTTTCCTACTCAA 57.172 33.333 0.00 0.00 45.80 3.02
2213 3367 6.827586 ACAAACACAAGTTTCCTACTCAAA 57.172 33.333 0.00 0.00 45.80 2.69
2214 3368 6.852664 ACAAACACAAGTTTCCTACTCAAAG 58.147 36.000 0.00 0.00 45.80 2.77
2215 3369 6.433093 ACAAACACAAGTTTCCTACTCAAAGT 59.567 34.615 0.00 0.00 45.80 2.66
2216 3370 6.436843 AACACAAGTTTCCTACTCAAAGTG 57.563 37.500 0.00 0.00 35.54 3.16
2217 3371 4.335594 ACACAAGTTTCCTACTCAAAGTGC 59.664 41.667 0.00 0.00 35.54 4.40
2218 3372 4.576463 CACAAGTTTCCTACTCAAAGTGCT 59.424 41.667 0.00 0.00 35.54 4.40
2219 3373 5.066505 CACAAGTTTCCTACTCAAAGTGCTT 59.933 40.000 0.00 0.00 35.54 3.91
2220 3374 5.652452 ACAAGTTTCCTACTCAAAGTGCTTT 59.348 36.000 0.00 0.00 35.54 3.51
2221 3375 6.826741 ACAAGTTTCCTACTCAAAGTGCTTTA 59.173 34.615 0.00 0.00 35.54 1.85
2222 3376 6.862711 AGTTTCCTACTCAAAGTGCTTTAC 57.137 37.500 0.00 0.00 28.23 2.01
2223 3377 6.354130 AGTTTCCTACTCAAAGTGCTTTACA 58.646 36.000 0.00 0.00 28.23 2.41
2224 3378 6.826741 AGTTTCCTACTCAAAGTGCTTTACAA 59.173 34.615 0.00 0.00 28.23 2.41
2225 3379 7.338449 AGTTTCCTACTCAAAGTGCTTTACAAA 59.662 33.333 0.00 0.00 28.23 2.83
2226 3380 7.633193 TTCCTACTCAAAGTGCTTTACAAAA 57.367 32.000 0.00 0.00 0.00 2.44
2227 3381 7.633193 TCCTACTCAAAGTGCTTTACAAAAA 57.367 32.000 0.00 0.00 0.00 1.94
2228 3382 7.477494 TCCTACTCAAAGTGCTTTACAAAAAC 58.523 34.615 0.00 0.00 0.00 2.43
2229 3383 7.121463 TCCTACTCAAAGTGCTTTACAAAAACA 59.879 33.333 0.00 0.00 0.00 2.83
2230 3384 7.757624 CCTACTCAAAGTGCTTTACAAAAACAA 59.242 33.333 0.00 0.00 0.00 2.83
2231 3385 7.581011 ACTCAAAGTGCTTTACAAAAACAAG 57.419 32.000 0.00 0.00 0.00 3.16
2232 3386 7.375053 ACTCAAAGTGCTTTACAAAAACAAGA 58.625 30.769 0.00 0.00 0.00 3.02
2233 3387 8.034804 ACTCAAAGTGCTTTACAAAAACAAGAT 58.965 29.630 0.00 0.00 0.00 2.40
2234 3388 8.183830 TCAAAGTGCTTTACAAAAACAAGATG 57.816 30.769 0.00 0.00 0.00 2.90
2235 3389 8.031864 TCAAAGTGCTTTACAAAAACAAGATGA 58.968 29.630 0.00 0.00 0.00 2.92
2236 3390 7.992180 AAGTGCTTTACAAAAACAAGATGAG 57.008 32.000 0.00 0.00 0.00 2.90
2237 3391 7.100458 AGTGCTTTACAAAAACAAGATGAGT 57.900 32.000 0.00 0.00 0.00 3.41
2238 3392 6.974622 AGTGCTTTACAAAAACAAGATGAGTG 59.025 34.615 0.00 0.00 0.00 3.51
2239 3393 5.748152 TGCTTTACAAAAACAAGATGAGTGC 59.252 36.000 0.00 0.00 0.00 4.40
2240 3394 5.979517 GCTTTACAAAAACAAGATGAGTGCT 59.020 36.000 0.00 0.00 0.00 4.40
2241 3395 7.138736 GCTTTACAAAAACAAGATGAGTGCTA 58.861 34.615 0.00 0.00 0.00 3.49
2242 3396 7.647715 GCTTTACAAAAACAAGATGAGTGCTAA 59.352 33.333 0.00 0.00 0.00 3.09
2243 3397 8.850454 TTTACAAAAACAAGATGAGTGCTAAC 57.150 30.769 0.00 0.00 0.00 2.34
2244 3398 6.449635 ACAAAAACAAGATGAGTGCTAACA 57.550 33.333 0.00 0.00 0.00 2.41
2276 3430 2.249844 GGGTACCGAGAGAGAGAGAG 57.750 60.000 5.65 0.00 40.86 3.20
2277 3431 1.764134 GGGTACCGAGAGAGAGAGAGA 59.236 57.143 5.65 0.00 40.86 3.10
2278 3432 2.224209 GGGTACCGAGAGAGAGAGAGAG 60.224 59.091 5.65 0.00 40.86 3.20
2279 3433 2.696707 GGTACCGAGAGAGAGAGAGAGA 59.303 54.545 0.00 0.00 0.00 3.10
2280 3434 3.243771 GGTACCGAGAGAGAGAGAGAGAG 60.244 56.522 0.00 0.00 0.00 3.20
2281 3435 2.747177 ACCGAGAGAGAGAGAGAGAGA 58.253 52.381 0.00 0.00 0.00 3.10
2282 3436 2.695666 ACCGAGAGAGAGAGAGAGAGAG 59.304 54.545 0.00 0.00 0.00 3.20
2283 3437 2.959030 CCGAGAGAGAGAGAGAGAGAGA 59.041 54.545 0.00 0.00 0.00 3.10
2284 3438 3.005261 CCGAGAGAGAGAGAGAGAGAGAG 59.995 56.522 0.00 0.00 0.00 3.20
2285 3439 3.885901 CGAGAGAGAGAGAGAGAGAGAGA 59.114 52.174 0.00 0.00 0.00 3.10
2286 3440 4.023279 CGAGAGAGAGAGAGAGAGAGAGAG 60.023 54.167 0.00 0.00 0.00 3.20
2287 3441 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
2288 3442 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2289 3443 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2290 3444 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2291 3445 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2292 3446 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2293 3447 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2294 3448 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2295 3449 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2296 3450 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2297 3451 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2298 3452 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2299 3453 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2300 3454 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2301 3455 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2302 3456 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2303 3457 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2304 3458 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2305 3459 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2306 3460 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2307 3461 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2308 3462 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2309 3463 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2310 3464 5.523588 AGAGAGAGAGAGAGAGAGAGAGAA 58.476 45.833 0.00 0.00 0.00 2.87
2311 3465 5.960811 AGAGAGAGAGAGAGAGAGAGAGAAA 59.039 44.000 0.00 0.00 0.00 2.52
2312 3466 6.098124 AGAGAGAGAGAGAGAGAGAGAGAAAG 59.902 46.154 0.00 0.00 0.00 2.62
2313 3467 5.960811 AGAGAGAGAGAGAGAGAGAGAAAGA 59.039 44.000 0.00 0.00 0.00 2.52
2314 3468 6.441924 AGAGAGAGAGAGAGAGAGAGAAAGAA 59.558 42.308 0.00 0.00 0.00 2.52
2315 3469 7.127032 AGAGAGAGAGAGAGAGAGAGAAAGAAT 59.873 40.741 0.00 0.00 0.00 2.40
2316 3470 7.637511 AGAGAGAGAGAGAGAGAGAAAGAATT 58.362 38.462 0.00 0.00 0.00 2.17
2317 3471 8.112183 AGAGAGAGAGAGAGAGAGAAAGAATTT 58.888 37.037 0.00 0.00 43.98 1.82
2318 3472 9.396022 GAGAGAGAGAGAGAGAGAAAGAATTTA 57.604 37.037 0.00 0.00 39.27 1.40
2319 3473 9.927081 AGAGAGAGAGAGAGAGAAAGAATTTAT 57.073 33.333 0.00 0.00 39.27 1.40
2346 3500 9.743057 AGTTTCATAATTCATTCACGTGAAAAA 57.257 25.926 32.69 27.34 41.09 1.94
2364 3518 3.904136 AAAATGTGTGCTGCAGTAGAC 57.096 42.857 22.62 22.62 0.00 2.59
2365 3519 2.549064 AATGTGTGCTGCAGTAGACA 57.451 45.000 31.23 31.23 38.18 3.41
2366 3520 2.549064 ATGTGTGCTGCAGTAGACAA 57.451 45.000 32.34 19.01 37.45 3.18
2367 3521 2.323968 TGTGTGCTGCAGTAGACAAA 57.676 45.000 28.22 15.05 31.64 2.83
2368 3522 2.849942 TGTGTGCTGCAGTAGACAAAT 58.150 42.857 28.22 0.00 31.64 2.32
2369 3523 4.001618 TGTGTGCTGCAGTAGACAAATA 57.998 40.909 28.22 8.80 31.64 1.40
2370 3524 4.578871 TGTGTGCTGCAGTAGACAAATAT 58.421 39.130 28.22 0.00 31.64 1.28
2371 3525 4.392754 TGTGTGCTGCAGTAGACAAATATG 59.607 41.667 28.22 0.00 31.64 1.78
2372 3526 4.393062 GTGTGCTGCAGTAGACAAATATGT 59.607 41.667 24.07 0.00 44.25 2.29
2373 3527 5.580691 GTGTGCTGCAGTAGACAAATATGTA 59.419 40.000 24.07 0.00 40.74 2.29
2374 3528 6.258727 GTGTGCTGCAGTAGACAAATATGTAT 59.741 38.462 24.07 0.00 40.74 2.29
2375 3529 6.258507 TGTGCTGCAGTAGACAAATATGTATG 59.741 38.462 16.64 0.00 40.74 2.39
2376 3530 6.479990 GTGCTGCAGTAGACAAATATGTATGA 59.520 38.462 16.64 0.00 40.74 2.15
2377 3531 7.011389 GTGCTGCAGTAGACAAATATGTATGAA 59.989 37.037 16.64 0.00 40.74 2.57
2378 3532 7.552330 TGCTGCAGTAGACAAATATGTATGAAA 59.448 33.333 16.64 0.00 40.74 2.69
2379 3533 8.562892 GCTGCAGTAGACAAATATGTATGAAAT 58.437 33.333 16.64 0.00 40.74 2.17
2504 3658 5.056894 ACTTAGTAACTTGACACGCCTAG 57.943 43.478 0.00 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.523915 TTCAGATACCATTAGCACAAAATCAT 57.476 30.769 0.00 0.00 0.00 2.45
1 2 7.936496 TTCAGATACCATTAGCACAAAATCA 57.064 32.000 0.00 0.00 0.00 2.57
5 6 8.849168 CCAATATTCAGATACCATTAGCACAAA 58.151 33.333 0.00 0.00 0.00 2.83
6 7 7.448161 CCCAATATTCAGATACCATTAGCACAA 59.552 37.037 0.00 0.00 0.00 3.33
7 8 6.942005 CCCAATATTCAGATACCATTAGCACA 59.058 38.462 0.00 0.00 0.00 4.57
8 9 6.375455 CCCCAATATTCAGATACCATTAGCAC 59.625 42.308 0.00 0.00 0.00 4.40
9 10 6.484288 CCCCAATATTCAGATACCATTAGCA 58.516 40.000 0.00 0.00 0.00 3.49
10 11 5.358160 GCCCCAATATTCAGATACCATTAGC 59.642 44.000 0.00 0.00 0.00 3.09
11 12 6.725364 AGCCCCAATATTCAGATACCATTAG 58.275 40.000 0.00 0.00 0.00 1.73
12 13 6.718593 AGCCCCAATATTCAGATACCATTA 57.281 37.500 0.00 0.00 0.00 1.90
22 23 4.264172 ACACCTACAAAGCCCCAATATTCA 60.264 41.667 0.00 0.00 0.00 2.57
28 29 3.818295 ATAACACCTACAAAGCCCCAA 57.182 42.857 0.00 0.00 0.00 4.12
42 43 7.058023 AGTTTCCAAAACCCCTTTATAACAC 57.942 36.000 0.00 0.00 0.00 3.32
52 55 4.726583 AGAGAGTAAGTTTCCAAAACCCC 58.273 43.478 0.00 0.00 0.00 4.95
155 158 2.224066 GGTGCTGTTCTCAGTGTGTACT 60.224 50.000 0.00 0.00 43.05 2.73
182 185 3.676291 AGGCTTTGTTGTTGTTGTTGT 57.324 38.095 0.00 0.00 0.00 3.32
183 186 5.866633 TCTAAAGGCTTTGTTGTTGTTGTTG 59.133 36.000 22.32 0.00 0.00 3.33
184 187 5.867174 GTCTAAAGGCTTTGTTGTTGTTGTT 59.133 36.000 22.32 0.00 0.00 2.83
185 188 5.185056 AGTCTAAAGGCTTTGTTGTTGTTGT 59.815 36.000 22.32 0.00 0.00 3.32
186 189 5.516339 CAGTCTAAAGGCTTTGTTGTTGTTG 59.484 40.000 22.32 6.31 0.00 3.33
187 190 5.417580 TCAGTCTAAAGGCTTTGTTGTTGTT 59.582 36.000 22.32 0.00 0.00 2.83
188 191 4.947388 TCAGTCTAAAGGCTTTGTTGTTGT 59.053 37.500 22.32 0.00 0.00 3.32
189 192 5.296780 TCTCAGTCTAAAGGCTTTGTTGTTG 59.703 40.000 22.32 13.18 0.00 3.33
190 193 5.437060 TCTCAGTCTAAAGGCTTTGTTGTT 58.563 37.500 22.32 0.00 0.00 2.83
191 194 5.036117 TCTCAGTCTAAAGGCTTTGTTGT 57.964 39.130 22.32 2.05 0.00 3.32
192 195 5.296780 TGTTCTCAGTCTAAAGGCTTTGTTG 59.703 40.000 22.32 13.80 0.00 3.33
193 196 5.437060 TGTTCTCAGTCTAAAGGCTTTGTT 58.563 37.500 22.32 0.00 0.00 2.83
194 197 5.036117 TGTTCTCAGTCTAAAGGCTTTGT 57.964 39.130 22.32 0.00 0.00 2.83
195 198 4.083590 GCTGTTCTCAGTCTAAAGGCTTTG 60.084 45.833 22.32 12.06 43.05 2.77
196 199 4.068599 GCTGTTCTCAGTCTAAAGGCTTT 58.931 43.478 17.76 17.76 43.05 3.51
197 200 3.071602 TGCTGTTCTCAGTCTAAAGGCTT 59.928 43.478 0.00 0.00 43.05 4.35
198 201 2.634940 TGCTGTTCTCAGTCTAAAGGCT 59.365 45.455 0.00 0.00 43.05 4.58
199 202 2.739379 GTGCTGTTCTCAGTCTAAAGGC 59.261 50.000 0.00 0.00 43.05 4.35
200 203 3.244215 TGGTGCTGTTCTCAGTCTAAAGG 60.244 47.826 0.00 0.00 43.05 3.11
201 204 3.993081 CTGGTGCTGTTCTCAGTCTAAAG 59.007 47.826 0.00 0.00 43.05 1.85
202 205 3.641436 TCTGGTGCTGTTCTCAGTCTAAA 59.359 43.478 0.00 0.00 43.05 1.85
203 206 3.230976 TCTGGTGCTGTTCTCAGTCTAA 58.769 45.455 0.00 0.00 43.05 2.10
204 207 2.822561 CTCTGGTGCTGTTCTCAGTCTA 59.177 50.000 0.00 0.00 43.05 2.59
205 208 1.617850 CTCTGGTGCTGTTCTCAGTCT 59.382 52.381 0.00 0.00 43.05 3.24
206 209 1.615883 TCTCTGGTGCTGTTCTCAGTC 59.384 52.381 0.00 0.00 43.05 3.51
207 210 1.709578 TCTCTGGTGCTGTTCTCAGT 58.290 50.000 0.00 0.00 43.05 3.41
208 211 2.224137 TGTTCTCTGGTGCTGTTCTCAG 60.224 50.000 0.00 0.00 43.87 3.35
209 212 1.762370 TGTTCTCTGGTGCTGTTCTCA 59.238 47.619 0.00 0.00 0.00 3.27
210 213 2.533266 TGTTCTCTGGTGCTGTTCTC 57.467 50.000 0.00 0.00 0.00 2.87
211 214 2.092968 TGTTGTTCTCTGGTGCTGTTCT 60.093 45.455 0.00 0.00 0.00 3.01
212 215 2.288666 TGTTGTTCTCTGGTGCTGTTC 58.711 47.619 0.00 0.00 0.00 3.18
213 216 2.418368 TGTTGTTCTCTGGTGCTGTT 57.582 45.000 0.00 0.00 0.00 3.16
214 217 2.017049 GTTGTTGTTCTCTGGTGCTGT 58.983 47.619 0.00 0.00 0.00 4.40
215 218 2.016318 TGTTGTTGTTCTCTGGTGCTG 58.984 47.619 0.00 0.00 0.00 4.41
216 219 2.418368 TGTTGTTGTTCTCTGGTGCT 57.582 45.000 0.00 0.00 0.00 4.40
217 220 2.163412 TGTTGTTGTTGTTCTCTGGTGC 59.837 45.455 0.00 0.00 0.00 5.01
218 221 4.165779 GTTGTTGTTGTTGTTCTCTGGTG 58.834 43.478 0.00 0.00 0.00 4.17
219 222 3.823873 TGTTGTTGTTGTTGTTCTCTGGT 59.176 39.130 0.00 0.00 0.00 4.00
220 223 4.433186 TGTTGTTGTTGTTGTTCTCTGG 57.567 40.909 0.00 0.00 0.00 3.86
221 224 5.218885 TGTTGTTGTTGTTGTTGTTCTCTG 58.781 37.500 0.00 0.00 0.00 3.35
225 228 5.643339 TGTTGTTGTTGTTGTTGTTGTTC 57.357 34.783 0.00 0.00 0.00 3.18
228 231 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
229 232 6.422776 TTTGTTGTTGTTGTTGTTGTTGTT 57.577 29.167 0.00 0.00 0.00 2.83
230 233 5.503194 GCTTTGTTGTTGTTGTTGTTGTTGT 60.503 36.000 0.00 0.00 0.00 3.32
231 234 4.903016 GCTTTGTTGTTGTTGTTGTTGTTG 59.097 37.500 0.00 0.00 0.00 3.33
234 237 3.745458 AGGCTTTGTTGTTGTTGTTGTTG 59.255 39.130 0.00 0.00 0.00 3.33
239 242 5.650543 CTCTAAAGGCTTTGTTGTTGTTGT 58.349 37.500 22.32 0.00 0.00 3.32
240 243 4.504097 GCTCTAAAGGCTTTGTTGTTGTTG 59.496 41.667 22.32 3.85 0.00 3.33
243 246 4.305989 TGCTCTAAAGGCTTTGTTGTTG 57.694 40.909 22.32 7.60 0.00 3.33
246 249 4.142513 GGAGATGCTCTAAAGGCTTTGTTG 60.143 45.833 22.32 11.98 0.00 3.33
249 252 3.614092 TGGAGATGCTCTAAAGGCTTTG 58.386 45.455 22.32 12.06 0.00 2.77
359 367 4.796495 GGAGGCCGCGGTCCAATT 62.796 66.667 31.19 14.67 32.55 2.32
432 465 2.040544 CGGCGGCTGATTTTGGACT 61.041 57.895 7.61 0.00 0.00 3.85
536 603 4.592192 CGGCGCCGGATCTGATGT 62.592 66.667 40.50 0.00 35.56 3.06
1294 2327 2.661866 AGCACTGACGACAACCGC 60.662 61.111 0.00 0.00 43.32 5.68
1582 2664 9.979578 CTACTCCGAGAACTACTAGATAAACTA 57.020 37.037 1.33 0.00 0.00 2.24
1588 2670 9.492973 GATAAACTACTCCGAGAACTACTAGAT 57.507 37.037 1.33 0.00 0.00 1.98
1589 2671 8.703743 AGATAAACTACTCCGAGAACTACTAGA 58.296 37.037 1.33 0.00 0.00 2.43
1590 2672 8.891671 AGATAAACTACTCCGAGAACTACTAG 57.108 38.462 1.33 0.00 0.00 2.57
1591 2673 9.979578 CTAGATAAACTACTCCGAGAACTACTA 57.020 37.037 1.33 0.00 0.00 1.82
1592 2674 8.485392 ACTAGATAAACTACTCCGAGAACTACT 58.515 37.037 1.33 0.00 0.00 2.57
1593 2675 8.661352 ACTAGATAAACTACTCCGAGAACTAC 57.339 38.462 1.33 0.00 0.00 2.73
1594 2676 9.979578 CTACTAGATAAACTACTCCGAGAACTA 57.020 37.037 1.33 0.00 0.00 2.24
1595 2677 8.485392 ACTACTAGATAAACTACTCCGAGAACT 58.515 37.037 1.33 0.00 0.00 3.01
1596 2678 8.661352 ACTACTAGATAAACTACTCCGAGAAC 57.339 38.462 1.33 0.00 0.00 3.01
1597 2679 9.107177 CAACTACTAGATAAACTACTCCGAGAA 57.893 37.037 1.33 0.00 0.00 2.87
1598 2680 8.481314 TCAACTACTAGATAAACTACTCCGAGA 58.519 37.037 1.33 0.00 0.00 4.04
1599 2681 8.659925 TCAACTACTAGATAAACTACTCCGAG 57.340 38.462 0.00 0.00 0.00 4.63
1600 2682 9.107177 CTTCAACTACTAGATAAACTACTCCGA 57.893 37.037 0.00 0.00 0.00 4.55
1601 2683 8.891720 ACTTCAACTACTAGATAAACTACTCCG 58.108 37.037 0.00 0.00 0.00 4.63
1628 2741 9.500785 TCAACTTCAACATAGTTTCATACATCA 57.499 29.630 0.00 0.00 33.73 3.07
1635 2748 9.500785 TCATACATCAACTTCAACATAGTTTCA 57.499 29.630 0.00 0.00 33.73 2.69
1639 2752 9.507329 AGTTTCATACATCAACTTCAACATAGT 57.493 29.630 0.00 0.00 0.00 2.12
1890 3044 0.468400 TACCCCACCTTGTTTGGCAC 60.468 55.000 0.00 0.00 32.13 5.01
1891 3045 0.178975 CTACCCCACCTTGTTTGGCA 60.179 55.000 0.00 0.00 32.13 4.92
1892 3046 0.898326 CCTACCCCACCTTGTTTGGC 60.898 60.000 0.00 0.00 32.13 4.52
1893 3047 0.898326 GCCTACCCCACCTTGTTTGG 60.898 60.000 0.00 0.00 0.00 3.28
1894 3048 0.112412 AGCCTACCCCACCTTGTTTG 59.888 55.000 0.00 0.00 0.00 2.93
1895 3049 1.633945 CTAGCCTACCCCACCTTGTTT 59.366 52.381 0.00 0.00 0.00 2.83
1896 3050 1.203389 TCTAGCCTACCCCACCTTGTT 60.203 52.381 0.00 0.00 0.00 2.83
1897 3051 0.416231 TCTAGCCTACCCCACCTTGT 59.584 55.000 0.00 0.00 0.00 3.16
1898 3052 1.123928 CTCTAGCCTACCCCACCTTG 58.876 60.000 0.00 0.00 0.00 3.61
1899 3053 0.031010 CCTCTAGCCTACCCCACCTT 60.031 60.000 0.00 0.00 0.00 3.50
1900 3054 1.229626 ACCTCTAGCCTACCCCACCT 61.230 60.000 0.00 0.00 0.00 4.00
1901 3055 1.049289 CACCTCTAGCCTACCCCACC 61.049 65.000 0.00 0.00 0.00 4.61
1902 3056 0.032416 TCACCTCTAGCCTACCCCAC 60.032 60.000 0.00 0.00 0.00 4.61
1903 3057 0.714180 TTCACCTCTAGCCTACCCCA 59.286 55.000 0.00 0.00 0.00 4.96
1904 3058 1.485480 GTTTCACCTCTAGCCTACCCC 59.515 57.143 0.00 0.00 0.00 4.95
1905 3059 1.485480 GGTTTCACCTCTAGCCTACCC 59.515 57.143 0.00 0.00 34.73 3.69
1906 3060 1.485480 GGGTTTCACCTCTAGCCTACC 59.515 57.143 0.00 0.00 38.64 3.18
1907 3061 2.185387 TGGGTTTCACCTCTAGCCTAC 58.815 52.381 0.00 0.00 38.64 3.18
1908 3062 2.634639 TGGGTTTCACCTCTAGCCTA 57.365 50.000 0.00 0.00 38.64 3.93
1909 3063 1.972588 ATGGGTTTCACCTCTAGCCT 58.027 50.000 0.00 0.00 38.64 4.58
1910 3064 3.454812 TCTTATGGGTTTCACCTCTAGCC 59.545 47.826 0.00 0.00 38.64 3.93
1911 3065 4.755266 TCTTATGGGTTTCACCTCTAGC 57.245 45.455 0.00 0.00 38.64 3.42
1912 3066 6.515862 CGAGATCTTATGGGTTTCACCTCTAG 60.516 46.154 0.00 0.00 38.64 2.43
1913 3067 5.302059 CGAGATCTTATGGGTTTCACCTCTA 59.698 44.000 0.00 0.00 38.64 2.43
1914 3068 4.100189 CGAGATCTTATGGGTTTCACCTCT 59.900 45.833 0.00 0.00 38.64 3.69
1915 3069 4.141914 ACGAGATCTTATGGGTTTCACCTC 60.142 45.833 0.00 0.00 38.64 3.85
1916 3070 3.775316 ACGAGATCTTATGGGTTTCACCT 59.225 43.478 0.00 0.00 38.64 4.00
1917 3071 3.871594 CACGAGATCTTATGGGTTTCACC 59.128 47.826 0.00 0.00 37.60 4.02
1918 3072 4.567159 GTCACGAGATCTTATGGGTTTCAC 59.433 45.833 0.00 0.00 0.00 3.18
1919 3073 4.382685 GGTCACGAGATCTTATGGGTTTCA 60.383 45.833 0.00 0.00 0.00 2.69
1920 3074 4.120589 GGTCACGAGATCTTATGGGTTTC 58.879 47.826 0.00 0.00 0.00 2.78
1921 3075 3.517901 TGGTCACGAGATCTTATGGGTTT 59.482 43.478 0.00 0.00 0.00 3.27
1922 3076 3.104512 TGGTCACGAGATCTTATGGGTT 58.895 45.455 0.00 0.00 0.00 4.11
1923 3077 2.747177 TGGTCACGAGATCTTATGGGT 58.253 47.619 0.00 0.00 0.00 4.51
1924 3078 3.133003 AGTTGGTCACGAGATCTTATGGG 59.867 47.826 0.00 0.00 0.00 4.00
1925 3079 4.142160 TGAGTTGGTCACGAGATCTTATGG 60.142 45.833 0.00 0.00 0.00 2.74
1926 3080 4.998788 TGAGTTGGTCACGAGATCTTATG 58.001 43.478 0.00 0.00 0.00 1.90
1927 3081 5.452496 CCATGAGTTGGTCACGAGATCTTAT 60.452 44.000 0.00 0.00 40.99 1.73
1928 3082 4.142160 CCATGAGTTGGTCACGAGATCTTA 60.142 45.833 0.00 0.00 40.99 2.10
1929 3083 3.368843 CCATGAGTTGGTCACGAGATCTT 60.369 47.826 0.00 0.00 40.99 2.40
1930 3084 2.167281 CCATGAGTTGGTCACGAGATCT 59.833 50.000 0.00 0.00 40.99 2.75
1931 3085 2.544685 CCATGAGTTGGTCACGAGATC 58.455 52.381 0.00 0.00 40.99 2.75
1932 3086 2.680312 CCATGAGTTGGTCACGAGAT 57.320 50.000 0.00 0.00 40.99 2.75
1942 3096 3.691118 CCATGTACCAGAACCATGAGTTG 59.309 47.826 0.00 0.00 39.40 3.16
1943 3097 3.587061 TCCATGTACCAGAACCATGAGTT 59.413 43.478 0.00 0.00 43.07 3.01
1944 3098 3.181329 TCCATGTACCAGAACCATGAGT 58.819 45.455 0.00 0.00 38.56 3.41
1945 3099 3.912496 TCCATGTACCAGAACCATGAG 57.088 47.619 0.00 0.00 38.56 2.90
1946 3100 4.202357 GCTATCCATGTACCAGAACCATGA 60.202 45.833 0.00 0.00 38.56 3.07
1947 3101 4.067896 GCTATCCATGTACCAGAACCATG 58.932 47.826 0.00 0.00 36.56 3.66
1948 3102 3.716353 TGCTATCCATGTACCAGAACCAT 59.284 43.478 0.00 0.00 0.00 3.55
1949 3103 3.111484 TGCTATCCATGTACCAGAACCA 58.889 45.455 0.00 0.00 0.00 3.67
1950 3104 3.838244 TGCTATCCATGTACCAGAACC 57.162 47.619 0.00 0.00 0.00 3.62
1951 3105 3.561725 GCTTGCTATCCATGTACCAGAAC 59.438 47.826 0.00 0.00 0.00 3.01
1952 3106 3.455910 AGCTTGCTATCCATGTACCAGAA 59.544 43.478 0.00 0.00 0.00 3.02
1953 3107 3.041211 AGCTTGCTATCCATGTACCAGA 58.959 45.455 0.00 0.00 0.00 3.86
1954 3108 3.482156 AGCTTGCTATCCATGTACCAG 57.518 47.619 0.00 0.00 0.00 4.00
1955 3109 3.433598 GGAAGCTTGCTATCCATGTACCA 60.434 47.826 11.19 0.00 33.30 3.25
1956 3110 3.142174 GGAAGCTTGCTATCCATGTACC 58.858 50.000 11.19 0.00 33.30 3.34
1957 3111 3.561725 GTGGAAGCTTGCTATCCATGTAC 59.438 47.826 19.34 1.62 44.55 2.90
1958 3112 3.741075 CGTGGAAGCTTGCTATCCATGTA 60.741 47.826 19.34 0.00 44.55 2.29
1959 3113 2.648059 GTGGAAGCTTGCTATCCATGT 58.352 47.619 19.34 0.00 44.55 3.21
1960 3114 1.600957 CGTGGAAGCTTGCTATCCATG 59.399 52.381 19.34 20.51 44.55 3.66
1961 3115 1.959042 CGTGGAAGCTTGCTATCCAT 58.041 50.000 19.34 0.00 44.55 3.41
1962 3116 0.744414 GCGTGGAAGCTTGCTATCCA 60.744 55.000 19.34 9.80 40.84 3.41
1963 3117 0.744414 TGCGTGGAAGCTTGCTATCC 60.744 55.000 19.34 6.99 38.13 2.59
1964 3118 1.086696 TTGCGTGGAAGCTTGCTATC 58.913 50.000 19.34 8.59 38.13 2.08
1965 3119 0.804989 GTTGCGTGGAAGCTTGCTAT 59.195 50.000 19.34 0.00 38.13 2.97
1966 3120 1.234615 GGTTGCGTGGAAGCTTGCTA 61.235 55.000 19.34 3.06 38.13 3.49
1967 3121 2.555547 GGTTGCGTGGAAGCTTGCT 61.556 57.895 19.34 0.00 38.13 3.91
1968 3122 2.050077 GGTTGCGTGGAAGCTTGC 60.050 61.111 11.58 11.58 38.13 4.01
1969 3123 0.314935 AATGGTTGCGTGGAAGCTTG 59.685 50.000 2.10 0.00 38.13 4.01
1970 3124 0.314935 CAATGGTTGCGTGGAAGCTT 59.685 50.000 0.00 0.00 38.13 3.74
1971 3125 0.823356 ACAATGGTTGCGTGGAAGCT 60.823 50.000 4.98 0.00 38.13 3.74
1972 3126 0.031994 AACAATGGTTGCGTGGAAGC 59.968 50.000 0.00 0.00 35.46 3.86
1973 3127 2.126467 CAAACAATGGTTGCGTGGAAG 58.874 47.619 0.00 0.00 37.30 3.46
1974 3128 1.478510 ACAAACAATGGTTGCGTGGAA 59.521 42.857 11.42 0.00 37.30 3.53
1975 3129 1.107114 ACAAACAATGGTTGCGTGGA 58.893 45.000 11.42 0.00 37.30 4.02
1976 3130 1.933247 AACAAACAATGGTTGCGTGG 58.067 45.000 11.42 0.00 37.30 4.94
1977 3131 3.701241 AGTAACAAACAATGGTTGCGTG 58.299 40.909 11.42 0.00 37.30 5.34
1978 3132 4.142359 TGAAGTAACAAACAATGGTTGCGT 60.142 37.500 11.42 1.90 37.30 5.24
1979 3133 4.355437 TGAAGTAACAAACAATGGTTGCG 58.645 39.130 11.42 0.00 37.30 4.85
1980 3134 5.405269 GGATGAAGTAACAAACAATGGTTGC 59.595 40.000 11.42 0.00 37.30 4.17
1981 3135 6.420604 GTGGATGAAGTAACAAACAATGGTTG 59.579 38.462 9.80 9.80 37.30 3.77
1982 3136 6.512297 GTGGATGAAGTAACAAACAATGGTT 58.488 36.000 0.00 0.00 39.43 3.67
1983 3137 5.278266 CGTGGATGAAGTAACAAACAATGGT 60.278 40.000 0.00 0.00 0.00 3.55
1984 3138 5.153513 CGTGGATGAAGTAACAAACAATGG 58.846 41.667 0.00 0.00 0.00 3.16
1985 3139 5.624900 CACGTGGATGAAGTAACAAACAATG 59.375 40.000 7.95 0.00 0.00 2.82
1986 3140 5.529430 TCACGTGGATGAAGTAACAAACAAT 59.471 36.000 17.00 0.00 0.00 2.71
1987 3141 4.876679 TCACGTGGATGAAGTAACAAACAA 59.123 37.500 17.00 0.00 0.00 2.83
1988 3142 4.443621 TCACGTGGATGAAGTAACAAACA 58.556 39.130 17.00 0.00 0.00 2.83
1989 3143 4.748102 TCTCACGTGGATGAAGTAACAAAC 59.252 41.667 17.00 0.00 0.00 2.93
1990 3144 4.951254 TCTCACGTGGATGAAGTAACAAA 58.049 39.130 17.00 0.00 0.00 2.83
1991 3145 4.594123 TCTCACGTGGATGAAGTAACAA 57.406 40.909 17.00 0.00 0.00 2.83
1992 3146 4.279922 TCTTCTCACGTGGATGAAGTAACA 59.720 41.667 28.18 16.75 37.67 2.41
1993 3147 4.806330 TCTTCTCACGTGGATGAAGTAAC 58.194 43.478 28.18 0.00 37.67 2.50
1994 3148 5.661056 ATCTTCTCACGTGGATGAAGTAA 57.339 39.130 28.18 19.07 37.67 2.24
1995 3149 6.769134 TTATCTTCTCACGTGGATGAAGTA 57.231 37.500 28.18 21.44 37.67 2.24
1996 3150 5.661056 TTATCTTCTCACGTGGATGAAGT 57.339 39.130 28.18 22.04 37.67 3.01
1997 3151 5.004821 CGTTTATCTTCTCACGTGGATGAAG 59.995 44.000 25.99 25.99 37.75 3.02
1998 3152 4.862574 CGTTTATCTTCTCACGTGGATGAA 59.137 41.667 17.00 15.72 0.00 2.57
1999 3153 4.157105 TCGTTTATCTTCTCACGTGGATGA 59.843 41.667 17.00 17.76 34.24 2.92
2000 3154 4.421058 TCGTTTATCTTCTCACGTGGATG 58.579 43.478 17.00 13.41 34.24 3.51
2001 3155 4.713824 TCGTTTATCTTCTCACGTGGAT 57.286 40.909 17.00 12.57 34.24 3.41
2002 3156 4.508461 TTCGTTTATCTTCTCACGTGGA 57.492 40.909 17.00 9.19 34.24 4.02
2003 3157 5.779806 ATTTCGTTTATCTTCTCACGTGG 57.220 39.130 17.00 6.71 34.24 4.94
2004 3158 7.726079 TGTTATTTCGTTTATCTTCTCACGTG 58.274 34.615 9.94 9.94 34.24 4.49
2005 3159 7.878477 TGTTATTTCGTTTATCTTCTCACGT 57.122 32.000 0.00 0.00 34.24 4.49
2006 3160 8.592155 TCATGTTATTTCGTTTATCTTCTCACG 58.408 33.333 0.00 0.00 0.00 4.35
2035 3189 9.988350 GTCATTTCACGTGAATGAAGTATTATT 57.012 29.630 30.10 0.26 39.68 1.40
2036 3190 9.161629 TGTCATTTCACGTGAATGAAGTATTAT 57.838 29.630 30.10 15.02 39.68 1.28
2037 3191 8.541133 TGTCATTTCACGTGAATGAAGTATTA 57.459 30.769 30.10 13.37 39.68 0.98
2038 3192 7.433708 TGTCATTTCACGTGAATGAAGTATT 57.566 32.000 30.10 2.43 39.68 1.89
2039 3193 7.334171 TCATGTCATTTCACGTGAATGAAGTAT 59.666 33.333 30.10 21.99 38.99 2.12
2040 3194 6.648725 TCATGTCATTTCACGTGAATGAAGTA 59.351 34.615 30.10 21.10 38.99 2.24
2041 3195 5.469760 TCATGTCATTTCACGTGAATGAAGT 59.530 36.000 30.10 20.61 38.99 3.01
2042 3196 5.930405 TCATGTCATTTCACGTGAATGAAG 58.070 37.500 30.10 22.81 38.99 3.02
2043 3197 5.938438 TCATGTCATTTCACGTGAATGAA 57.062 34.783 30.10 17.05 38.99 2.57
2044 3198 5.938438 TTCATGTCATTTCACGTGAATGA 57.062 34.783 30.10 27.52 44.04 2.57
2045 3199 6.989796 TTTTCATGTCATTTCACGTGAATG 57.010 33.333 30.10 26.04 46.71 2.67
2046 3200 9.859427 ATATTTTTCATGTCATTTCACGTGAAT 57.141 25.926 30.10 17.54 46.71 2.57
2047 3201 9.127006 CATATTTTTCATGTCATTTCACGTGAA 57.873 29.630 26.53 26.53 46.14 3.18
2048 3202 8.296000 ACATATTTTTCATGTCATTTCACGTGA 58.704 29.630 15.76 15.76 39.97 4.35
2049 3203 8.367396 CACATATTTTTCATGTCATTTCACGTG 58.633 33.333 9.94 9.94 34.39 4.49
2050 3204 8.081633 ACACATATTTTTCATGTCATTTCACGT 58.918 29.630 0.00 0.00 34.39 4.49
2051 3205 8.451687 ACACATATTTTTCATGTCATTTCACG 57.548 30.769 0.00 0.00 34.39 4.35
2079 3233 9.546428 ACATGATGATTTCACGTGATAGATAAA 57.454 29.630 20.80 9.91 37.11 1.40
2089 3243 9.859427 ATTTTATTTCACATGATGATTTCACGT 57.141 25.926 0.00 0.00 37.11 4.49
2125 3279 9.944663 GTGAATGAAGTAACAAACAAGATGTTA 57.055 29.630 0.00 0.00 40.14 2.41
2126 3280 7.643764 CGTGAATGAAGTAACAAACAAGATGTT 59.356 33.333 0.00 0.00 43.41 2.71
2127 3281 7.132213 CGTGAATGAAGTAACAAACAAGATGT 58.868 34.615 0.00 0.00 0.00 3.06
2128 3282 7.112009 CACGTGAATGAAGTAACAAACAAGATG 59.888 37.037 10.90 0.00 0.00 2.90
2129 3283 7.011950 TCACGTGAATGAAGTAACAAACAAGAT 59.988 33.333 17.62 0.00 0.00 2.40
2130 3284 6.314152 TCACGTGAATGAAGTAACAAACAAGA 59.686 34.615 17.62 0.00 0.00 3.02
2131 3285 6.482835 TCACGTGAATGAAGTAACAAACAAG 58.517 36.000 17.62 0.00 0.00 3.16
2132 3286 6.424176 TCACGTGAATGAAGTAACAAACAA 57.576 33.333 17.62 0.00 0.00 2.83
2133 3287 6.426327 CATCACGTGAATGAAGTAACAAACA 58.574 36.000 24.13 0.00 30.82 2.83
2134 3288 5.851177 CCATCACGTGAATGAAGTAACAAAC 59.149 40.000 24.13 0.00 30.82 2.93
2135 3289 5.760743 TCCATCACGTGAATGAAGTAACAAA 59.239 36.000 24.13 0.00 30.82 2.83
2136 3290 5.301555 TCCATCACGTGAATGAAGTAACAA 58.698 37.500 24.13 0.00 30.82 2.83
2137 3291 4.888917 TCCATCACGTGAATGAAGTAACA 58.111 39.130 24.13 0.00 30.82 2.41
2138 3292 4.929808 ACTCCATCACGTGAATGAAGTAAC 59.070 41.667 24.13 0.00 30.82 2.50
2139 3293 5.147330 ACTCCATCACGTGAATGAAGTAA 57.853 39.130 24.13 0.00 30.82 2.24
2140 3294 4.801330 ACTCCATCACGTGAATGAAGTA 57.199 40.909 24.13 0.00 30.82 2.24
2141 3295 3.685139 ACTCCATCACGTGAATGAAGT 57.315 42.857 24.13 19.10 30.82 3.01
2142 3296 4.748892 AGTACTCCATCACGTGAATGAAG 58.251 43.478 24.13 18.48 30.82 3.02
2143 3297 4.801330 AGTACTCCATCACGTGAATGAA 57.199 40.909 24.13 7.68 30.82 2.57
2144 3298 4.201881 CGTAGTACTCCATCACGTGAATGA 60.202 45.833 24.13 19.57 0.00 2.57
2145 3299 4.035684 CGTAGTACTCCATCACGTGAATG 58.964 47.826 24.13 19.31 0.00 2.67
2146 3300 3.693085 ACGTAGTACTCCATCACGTGAAT 59.307 43.478 24.13 8.50 43.54 2.57
2147 3301 3.076621 ACGTAGTACTCCATCACGTGAA 58.923 45.455 24.13 5.15 43.54 3.18
2148 3302 2.703416 ACGTAGTACTCCATCACGTGA 58.297 47.619 22.48 22.48 43.54 4.35
2161 3315 7.712639 CTCCACAGGAGTAGTAAATACGTAGTA 59.287 40.741 0.08 0.00 45.65 1.82
2162 3316 6.541641 CTCCACAGGAGTAGTAAATACGTAGT 59.458 42.308 0.08 0.00 44.25 2.73
2163 3317 6.932356 TCCACAGGAGTAGTAAATACGTAG 57.068 41.667 0.08 0.00 39.55 3.51
2164 3318 6.932356 CTCCACAGGAGTAGTAAATACGTA 57.068 41.667 0.00 0.00 44.25 3.57
2165 3319 5.831702 CTCCACAGGAGTAGTAAATACGT 57.168 43.478 4.89 0.00 44.25 3.57
2177 3331 7.572481 AACTTGTGTTTGTTACTCCACAGGAG 61.572 42.308 11.38 11.38 43.57 3.69
2178 3332 3.916359 TGTGTTTGTTACTCCACAGGA 57.084 42.857 0.00 0.00 33.19 3.86
2179 3333 3.945285 ACTTGTGTTTGTTACTCCACAGG 59.055 43.478 0.00 0.00 38.86 4.00
2180 3334 5.560966 AACTTGTGTTTGTTACTCCACAG 57.439 39.130 0.00 0.00 38.86 3.66
2181 3335 5.106078 GGAAACTTGTGTTTGTTACTCCACA 60.106 40.000 0.00 0.00 45.36 4.17
2182 3336 5.124936 AGGAAACTTGTGTTTGTTACTCCAC 59.875 40.000 0.00 0.00 45.36 4.02
2183 3337 5.258051 AGGAAACTTGTGTTTGTTACTCCA 58.742 37.500 0.00 0.00 45.36 3.86
2184 3338 5.830000 AGGAAACTTGTGTTTGTTACTCC 57.170 39.130 0.00 0.00 45.36 3.85
2185 3339 7.279313 TGAGTAGGAAACTTGTGTTTGTTACTC 59.721 37.037 20.57 20.57 45.36 2.59
2186 3340 7.107542 TGAGTAGGAAACTTGTGTTTGTTACT 58.892 34.615 11.19 11.19 45.36 2.24
2187 3341 7.311364 TGAGTAGGAAACTTGTGTTTGTTAC 57.689 36.000 0.00 2.64 45.36 2.50
2188 3342 7.925043 TTGAGTAGGAAACTTGTGTTTGTTA 57.075 32.000 0.00 0.00 45.36 2.41
2189 3343 6.827586 TTGAGTAGGAAACTTGTGTTTGTT 57.172 33.333 0.00 0.00 45.36 2.83
2190 3344 6.433093 ACTTTGAGTAGGAAACTTGTGTTTGT 59.567 34.615 0.00 0.00 45.36 2.83
2191 3345 6.747280 CACTTTGAGTAGGAAACTTGTGTTTG 59.253 38.462 0.00 0.00 45.36 2.93
2193 3347 5.163652 GCACTTTGAGTAGGAAACTTGTGTT 60.164 40.000 0.00 0.00 43.67 3.32
2194 3348 4.335594 GCACTTTGAGTAGGAAACTTGTGT 59.664 41.667 0.00 0.00 43.67 3.72
2195 3349 4.576463 AGCACTTTGAGTAGGAAACTTGTG 59.424 41.667 0.00 0.00 43.67 3.33
2196 3350 4.781934 AGCACTTTGAGTAGGAAACTTGT 58.218 39.130 0.00 0.00 43.67 3.16
2197 3351 5.757850 AAGCACTTTGAGTAGGAAACTTG 57.242 39.130 0.00 0.00 43.67 3.16
2198 3352 6.826741 TGTAAAGCACTTTGAGTAGGAAACTT 59.173 34.615 5.89 0.00 36.57 2.66
2199 3353 6.354130 TGTAAAGCACTTTGAGTAGGAAACT 58.646 36.000 5.89 0.00 38.01 2.66
2200 3354 6.613755 TGTAAAGCACTTTGAGTAGGAAAC 57.386 37.500 5.89 0.00 34.23 2.78
2201 3355 7.633193 TTTGTAAAGCACTTTGAGTAGGAAA 57.367 32.000 5.89 0.00 34.23 3.13
2202 3356 7.633193 TTTTGTAAAGCACTTTGAGTAGGAA 57.367 32.000 5.89 0.00 34.23 3.36
2203 3357 7.121463 TGTTTTTGTAAAGCACTTTGAGTAGGA 59.879 33.333 5.89 0.00 34.23 2.94
2204 3358 7.254852 TGTTTTTGTAAAGCACTTTGAGTAGG 58.745 34.615 5.89 0.00 34.23 3.18
2205 3359 8.682128 TTGTTTTTGTAAAGCACTTTGAGTAG 57.318 30.769 5.89 0.00 34.23 2.57
2206 3360 8.516234 TCTTGTTTTTGTAAAGCACTTTGAGTA 58.484 29.630 5.89 0.00 34.23 2.59
2207 3361 7.375053 TCTTGTTTTTGTAAAGCACTTTGAGT 58.625 30.769 5.89 0.00 34.23 3.41
2208 3362 7.810766 TCTTGTTTTTGTAAAGCACTTTGAG 57.189 32.000 5.89 0.00 34.23 3.02
2209 3363 8.031864 TCATCTTGTTTTTGTAAAGCACTTTGA 58.968 29.630 5.89 0.00 34.23 2.69
2210 3364 8.183830 TCATCTTGTTTTTGTAAAGCACTTTG 57.816 30.769 5.89 0.00 34.23 2.77
2211 3365 8.034804 ACTCATCTTGTTTTTGTAAAGCACTTT 58.965 29.630 0.70 0.70 36.63 2.66
2212 3366 7.489113 CACTCATCTTGTTTTTGTAAAGCACTT 59.511 33.333 0.00 0.00 0.00 3.16
2213 3367 6.974622 CACTCATCTTGTTTTTGTAAAGCACT 59.025 34.615 0.00 0.00 0.00 4.40
2214 3368 6.291796 GCACTCATCTTGTTTTTGTAAAGCAC 60.292 38.462 0.00 0.00 0.00 4.40
2215 3369 5.748152 GCACTCATCTTGTTTTTGTAAAGCA 59.252 36.000 0.00 0.00 0.00 3.91
2216 3370 5.979517 AGCACTCATCTTGTTTTTGTAAAGC 59.020 36.000 0.00 0.00 0.00 3.51
2217 3371 8.958043 GTTAGCACTCATCTTGTTTTTGTAAAG 58.042 33.333 0.00 0.00 0.00 1.85
2218 3372 8.462811 TGTTAGCACTCATCTTGTTTTTGTAAA 58.537 29.630 0.00 0.00 0.00 2.01
2219 3373 7.913297 GTGTTAGCACTCATCTTGTTTTTGTAA 59.087 33.333 1.96 0.00 42.13 2.41
2220 3374 7.414436 GTGTTAGCACTCATCTTGTTTTTGTA 58.586 34.615 1.96 0.00 42.13 2.41
2221 3375 6.265577 GTGTTAGCACTCATCTTGTTTTTGT 58.734 36.000 1.96 0.00 42.13 2.83
2222 3376 6.738352 GTGTTAGCACTCATCTTGTTTTTG 57.262 37.500 1.96 0.00 42.13 2.44
2236 3390 4.474226 CTTCCTGTTGAAGTGTTAGCAC 57.526 45.455 0.72 0.72 44.59 4.40
2246 3400 1.621814 CTCGGTACCCTTCCTGTTGAA 59.378 52.381 6.25 0.00 0.00 2.69
2247 3401 1.203087 TCTCGGTACCCTTCCTGTTGA 60.203 52.381 6.25 0.00 0.00 3.18
2248 3402 1.204941 CTCTCGGTACCCTTCCTGTTG 59.795 57.143 6.25 0.00 0.00 3.33
2249 3403 1.076677 TCTCTCGGTACCCTTCCTGTT 59.923 52.381 6.25 0.00 0.00 3.16
2250 3404 0.702902 TCTCTCGGTACCCTTCCTGT 59.297 55.000 6.25 0.00 0.00 4.00
2251 3405 1.064611 TCTCTCTCGGTACCCTTCCTG 60.065 57.143 6.25 0.00 0.00 3.86
2252 3406 1.213430 CTCTCTCTCGGTACCCTTCCT 59.787 57.143 6.25 0.00 0.00 3.36
2253 3407 1.212441 TCTCTCTCTCGGTACCCTTCC 59.788 57.143 6.25 0.00 0.00 3.46
2254 3408 2.171027 TCTCTCTCTCTCGGTACCCTTC 59.829 54.545 6.25 0.00 0.00 3.46
2255 3409 2.171870 CTCTCTCTCTCTCGGTACCCTT 59.828 54.545 6.25 0.00 0.00 3.95
2256 3410 1.766496 CTCTCTCTCTCTCGGTACCCT 59.234 57.143 6.25 0.00 0.00 4.34
2257 3411 1.764134 TCTCTCTCTCTCTCGGTACCC 59.236 57.143 6.25 0.00 0.00 3.69
2258 3412 2.696707 TCTCTCTCTCTCTCTCGGTACC 59.303 54.545 0.16 0.16 0.00 3.34
2259 3413 3.635373 TCTCTCTCTCTCTCTCTCGGTAC 59.365 52.174 0.00 0.00 0.00 3.34
2260 3414 3.889538 CTCTCTCTCTCTCTCTCTCGGTA 59.110 52.174 0.00 0.00 0.00 4.02
2261 3415 2.695666 CTCTCTCTCTCTCTCTCTCGGT 59.304 54.545 0.00 0.00 0.00 4.69
2262 3416 2.959030 TCTCTCTCTCTCTCTCTCTCGG 59.041 54.545 0.00 0.00 0.00 4.63
2263 3417 3.885901 TCTCTCTCTCTCTCTCTCTCTCG 59.114 52.174 0.00 0.00 0.00 4.04
2264 3418 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2265 3419 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2266 3420 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2267 3421 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2268 3422 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2269 3423 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2270 3424 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2271 3425 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2272 3426 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2273 3427 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2274 3428 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2275 3429 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2276 3430 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2277 3431 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2278 3432 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2279 3433 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2280 3434 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2281 3435 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2282 3436 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2283 3437 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2284 3438 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2285 3439 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2286 3440 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2287 3441 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
2288 3442 5.860941 TTCTCTCTCTCTCTCTCTCTCTC 57.139 47.826 0.00 0.00 0.00 3.20
2289 3443 5.960811 TCTTTCTCTCTCTCTCTCTCTCTCT 59.039 44.000 0.00 0.00 0.00 3.10
2290 3444 6.227298 TCTTTCTCTCTCTCTCTCTCTCTC 57.773 45.833 0.00 0.00 0.00 3.20
2291 3445 6.627087 TTCTTTCTCTCTCTCTCTCTCTCT 57.373 41.667 0.00 0.00 0.00 3.10
2292 3446 7.872113 AATTCTTTCTCTCTCTCTCTCTCTC 57.128 40.000 0.00 0.00 0.00 3.20
2293 3447 9.927081 ATAAATTCTTTCTCTCTCTCTCTCTCT 57.073 33.333 0.00 0.00 0.00 3.10
2320 3474 9.743057 TTTTTCACGTGAATGAATTATGAAACT 57.257 25.926 30.10 0.00 38.37 2.66
2343 3497 3.631686 TGTCTACTGCAGCACACATTTTT 59.368 39.130 15.27 0.00 0.00 1.94
2344 3498 3.213506 TGTCTACTGCAGCACACATTTT 58.786 40.909 15.27 0.00 0.00 1.82
2345 3499 2.849942 TGTCTACTGCAGCACACATTT 58.150 42.857 15.27 0.00 0.00 2.32
2346 3500 2.549064 TGTCTACTGCAGCACACATT 57.451 45.000 15.27 0.00 0.00 2.71
2347 3501 2.549064 TTGTCTACTGCAGCACACAT 57.451 45.000 15.27 0.00 0.00 3.21
2348 3502 2.323968 TTTGTCTACTGCAGCACACA 57.676 45.000 15.27 10.86 0.00 3.72
2349 3503 4.393062 ACATATTTGTCTACTGCAGCACAC 59.607 41.667 15.27 8.11 0.00 3.82
2350 3504 4.578871 ACATATTTGTCTACTGCAGCACA 58.421 39.130 15.27 11.63 0.00 4.57
2351 3505 6.479990 TCATACATATTTGTCTACTGCAGCAC 59.520 38.462 15.27 8.89 37.28 4.40
2352 3506 6.581712 TCATACATATTTGTCTACTGCAGCA 58.418 36.000 15.27 0.00 37.28 4.41
2353 3507 7.482654 TTCATACATATTTGTCTACTGCAGC 57.517 36.000 15.27 0.00 37.28 5.25


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.