Multiple sequence alignment - TraesCS4A01G213100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G213100 chr4A 100.000 3228 0 0 1 3228 511134523 511131296 0.000000e+00 5962.0
1 TraesCS4A01G213100 chr4A 99.333 150 1 0 2845 2994 535039238 535039387 4.100000e-69 272.0
2 TraesCS4A01G213100 chr4A 93.103 58 2 2 2600 2655 714743771 714743828 2.060000e-12 84.2
3 TraesCS4A01G213100 chr4B 92.770 982 44 6 954 1928 109045117 109046078 0.000000e+00 1395.0
4 TraesCS4A01G213100 chr4B 86.458 864 54 31 2024 2844 109046182 109047025 0.000000e+00 889.0
5 TraesCS4A01G213100 chr4B 95.890 219 9 0 2994 3212 109047016 109047234 3.960000e-94 355.0
6 TraesCS4A01G213100 chr4B 99.359 156 1 0 2843 2998 217725124 217725279 1.900000e-72 283.0
7 TraesCS4A01G213100 chr4B 96.000 50 2 0 1889 1938 109046072 109046121 7.420000e-12 82.4
8 TraesCS4A01G213100 chr4D 89.219 1076 55 25 891 1928 77042391 77041339 0.000000e+00 1288.0
9 TraesCS4A01G213100 chr4D 86.105 986 56 28 967 1928 76603538 76604466 0.000000e+00 987.0
10 TraesCS4A01G213100 chr4D 92.626 556 28 9 2022 2573 76604704 76605250 0.000000e+00 787.0
11 TraesCS4A01G213100 chr4D 95.495 222 10 0 2994 3215 77028260 77028039 3.960000e-94 355.0
12 TraesCS4A01G213100 chr4D 94.977 219 11 0 2994 3212 76609166 76609384 8.570000e-91 344.0
13 TraesCS4A01G213100 chr4D 84.076 314 14 8 2261 2573 77040136 77039858 1.480000e-68 270.0
14 TraesCS4A01G213100 chr4D 89.796 147 9 2 1943 2084 77041229 77041084 1.980000e-42 183.0
15 TraesCS4A01G213100 chr4D 77.451 204 33 7 687 889 347463982 347463791 3.400000e-20 110.0
16 TraesCS4A01G213100 chr4D 92.857 70 5 0 1871 1940 76604479 76604548 5.700000e-18 102.0
17 TraesCS4A01G213100 chr4D 90.625 64 6 0 1877 1940 77041320 77041257 5.740000e-13 86.1
18 TraesCS4A01G213100 chr4D 93.750 48 3 0 2599 2646 230912884 230912931 4.470000e-09 73.1
19 TraesCS4A01G213100 chr4D 95.455 44 2 0 2642 2685 76605251 76605294 1.610000e-08 71.3
20 TraesCS4A01G213100 chr4D 100.000 34 0 0 2648 2681 77039851 77039818 2.690000e-06 63.9
21 TraesCS4A01G213100 chr4D 96.970 33 0 1 1985 2016 76604653 76604685 2.000000e-03 54.7
22 TraesCS4A01G213100 chr1A 82.639 576 81 10 1 569 104582217 104581654 2.890000e-135 492.0
23 TraesCS4A01G213100 chr1A 93.333 45 3 0 2603 2647 9126387 9126343 2.080000e-07 67.6
24 TraesCS4A01G213100 chr2D 81.707 574 77 13 1 569 587242555 587243105 1.370000e-123 453.0
25 TraesCS4A01G213100 chr2D 80.263 228 35 3 577 794 106163601 106163374 2.580000e-36 163.0
26 TraesCS4A01G213100 chr5D 75.405 740 129 22 1129 1858 201804784 201804088 3.130000e-80 309.0
27 TraesCS4A01G213100 chr5D 97.561 41 1 0 2603 2643 228069735 228069775 1.610000e-08 71.3
28 TraesCS4A01G213100 chr5D 97.561 41 1 0 2603 2643 440652061 440652101 1.610000e-08 71.3
29 TraesCS4A01G213100 chr6A 99.351 154 0 1 2845 2998 339577013 339576861 8.820000e-71 278.0
30 TraesCS4A01G213100 chr6A 98.718 156 1 1 2839 2994 133810161 133810315 3.170000e-70 276.0
31 TraesCS4A01G213100 chr6A 78.776 245 42 4 579 813 200925239 200924995 4.310000e-34 156.0
32 TraesCS4A01G213100 chr2A 99.342 152 1 0 2843 2994 651820097 651819946 3.170000e-70 276.0
33 TraesCS4A01G213100 chr2B 100.000 147 0 0 2845 2991 437240421 437240275 4.100000e-69 272.0
34 TraesCS4A01G213100 chr3A 98.684 152 2 0 2843 2994 44726935 44727086 1.480000e-68 270.0
35 TraesCS4A01G213100 chr3A 91.667 48 3 1 2597 2643 586884268 586884315 7.480000e-07 65.8
36 TraesCS4A01G213100 chr7B 99.320 147 1 0 2848 2994 748202748 748202894 1.910000e-67 267.0
37 TraesCS4A01G213100 chr7B 94.771 153 7 1 2843 2994 737492 737340 1.500000e-58 237.0
38 TraesCS4A01G213100 chr6D 77.632 380 70 12 197 569 20347835 20348206 1.950000e-52 217.0
39 TraesCS4A01G213100 chr6D 100.000 43 0 0 2601 2643 291239508 291239466 2.670000e-11 80.5
40 TraesCS4A01G213100 chr7A 75.163 306 61 7 580 872 732758166 732757863 2.610000e-26 130.0
41 TraesCS4A01G213100 chr7D 80.952 168 26 2 140 301 616765991 616765824 9.400000e-26 128.0
42 TraesCS4A01G213100 chr5B 77.376 221 34 11 577 784 391074893 391074676 2.030000e-22 117.0
43 TraesCS4A01G213100 chrUn 84.524 84 11 1 1156 1237 67960420 67960503 7.420000e-12 82.4
44 TraesCS4A01G213100 chr3B 95.652 46 1 1 2600 2644 564019333 564019288 4.470000e-09 73.1
45 TraesCS4A01G213100 chr3D 97.561 41 1 0 2603 2643 135306154 135306194 1.610000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G213100 chr4A 511131296 511134523 3227 True 5962.00 5962 100.0000 1 3228 1 chr4A.!!$R1 3227
1 TraesCS4A01G213100 chr4B 109045117 109047234 2117 False 680.35 1395 92.7795 954 3212 4 chr4B.!!$F2 2258
2 TraesCS4A01G213100 chr4D 76603538 76609384 5846 False 391.00 987 93.1650 967 3212 6 chr4D.!!$F2 2245
3 TraesCS4A01G213100 chr4D 77039818 77042391 2573 True 378.20 1288 90.7432 891 2681 5 chr4D.!!$R3 1790
4 TraesCS4A01G213100 chr1A 104581654 104582217 563 True 492.00 492 82.6390 1 569 1 chr1A.!!$R2 568
5 TraesCS4A01G213100 chr2D 587242555 587243105 550 False 453.00 453 81.7070 1 569 1 chr2D.!!$F1 568
6 TraesCS4A01G213100 chr5D 201804088 201804784 696 True 309.00 309 75.4050 1129 1858 1 chr5D.!!$R1 729

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
856 867 0.030369 GCCCACGGACGTATAGAGTG 59.97 60.0 0.0 0.0 0.0 3.51 F
857 868 0.030369 CCCACGGACGTATAGAGTGC 59.97 60.0 0.0 0.0 0.0 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1839 1915 0.179100 CTGGCCGTCGTGATGAAGAT 60.179 55.0 0.0 0.0 0.00 2.4 R
2855 7663 0.452987 GTCCGCCACTATCGTGTGTA 59.547 55.0 0.0 0.0 39.55 2.9 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 4.740822 GCCACCAGCCACCCGAAT 62.741 66.667 0.00 0.00 34.35 3.34
54 55 2.795973 CGATGTCACGGCGGTCTA 59.204 61.111 13.24 0.00 0.00 2.59
55 56 1.298413 CGATGTCACGGCGGTCTAG 60.298 63.158 13.24 0.00 0.00 2.43
85 86 1.287815 CTGTACGGGACAACGCTCA 59.712 57.895 0.00 0.00 37.70 4.26
87 88 1.288127 GTACGGGACAACGCTCACT 59.712 57.895 0.00 0.00 37.37 3.41
102 103 2.616510 GCTCACTGGTGAAGGTAAGCAT 60.617 50.000 4.94 0.00 39.39 3.79
127 129 1.568504 ACACCGAGGAGGAAATAGCA 58.431 50.000 0.00 0.00 45.00 3.49
136 138 3.709653 AGGAGGAAATAGCATTACCGTCA 59.290 43.478 0.00 0.00 0.00 4.35
137 139 4.058817 GGAGGAAATAGCATTACCGTCAG 58.941 47.826 0.00 0.00 0.00 3.51
150 152 5.562506 TTACCGTCAGTAGACTTGATGAG 57.437 43.478 0.00 0.00 42.73 2.90
172 174 1.078497 GCGGTCATCATCCACACCA 60.078 57.895 0.00 0.00 0.00 4.17
175 177 0.749454 GGTCATCATCCACACCAGCC 60.749 60.000 0.00 0.00 0.00 4.85
182 184 4.704833 CCACACCAGCCGTCAGGG 62.705 72.222 0.00 0.00 38.20 4.45
207 210 1.221840 CGTAGCTGGGAGCATGGTT 59.778 57.895 0.00 0.00 45.56 3.67
224 227 1.459539 TTAGCTCTAGGGCGGCCAT 60.460 57.895 31.59 17.59 37.29 4.40
227 230 3.164269 CTCTAGGGCGGCCATGGT 61.164 66.667 31.59 12.15 0.00 3.55
250 253 0.759346 AAGACGAAGAGCAAGGTGGT 59.241 50.000 0.00 0.00 0.00 4.16
273 276 2.692368 ATCCCATCCCGGTGCACT 60.692 61.111 17.98 0.00 0.00 4.40
282 285 1.672030 CCGGTGCACTGAAGCATCA 60.672 57.895 27.46 0.00 45.86 3.07
291 294 1.073964 CTGAAGCATCAGTGTCACCG 58.926 55.000 10.80 0.00 46.60 4.94
321 324 4.993705 AACATGGGAGAAAAGTGTAGGA 57.006 40.909 0.00 0.00 0.00 2.94
323 326 4.652822 ACATGGGAGAAAAGTGTAGGAAC 58.347 43.478 0.00 0.00 0.00 3.62
326 329 2.643304 GGGAGAAAAGTGTAGGAACCCT 59.357 50.000 0.00 0.00 37.71 4.34
327 330 3.074094 GGGAGAAAAGTGTAGGAACCCTT 59.926 47.826 0.00 0.00 34.61 3.95
330 336 5.597182 GGAGAAAAGTGTAGGAACCCTTTTT 59.403 40.000 0.00 0.00 41.50 1.94
342 348 3.170360 CCTTTTTAGAGGGTCGCCC 57.830 57.895 6.80 6.80 45.90 6.13
367 373 4.377708 TGCGCACCAGCTGTCGAT 62.378 61.111 19.79 0.00 39.10 3.59
371 377 1.153289 GCACCAGCTGTCGATCCAT 60.153 57.895 13.81 0.00 37.91 3.41
376 382 1.414181 CCAGCTGTCGATCCATAAGGT 59.586 52.381 13.81 0.00 35.89 3.50
430 437 1.528776 GGTCGCGGTAGAGAGGGAT 60.529 63.158 6.13 0.00 0.00 3.85
438 445 1.218196 GGTAGAGAGGGATCAGGGTCA 59.782 57.143 0.00 0.00 0.00 4.02
440 447 0.031616 AGAGAGGGATCAGGGTCACC 60.032 60.000 0.00 0.00 0.00 4.02
450 457 4.021925 GGGTCACCAGCGCCTTCT 62.022 66.667 2.29 0.00 36.50 2.85
454 461 0.461961 GTCACCAGCGCCTTCTAGAT 59.538 55.000 2.29 0.00 0.00 1.98
455 462 1.681793 GTCACCAGCGCCTTCTAGATA 59.318 52.381 2.29 0.00 0.00 1.98
531 542 4.079850 CAGGCTGAGCTCTGCGGT 62.080 66.667 31.40 21.73 41.04 5.68
541 552 0.602905 GCTCTGCGGTTGGTGTAGTT 60.603 55.000 0.00 0.00 0.00 2.24
561 572 7.987458 TGTAGTTGATGAAGAAGTTTGAGAAGT 59.013 33.333 0.00 0.00 0.00 3.01
569 580 3.904339 AGAAGTTTGAGAAGTAGGCTGGA 59.096 43.478 0.00 0.00 0.00 3.86
570 581 4.534103 AGAAGTTTGAGAAGTAGGCTGGAT 59.466 41.667 0.00 0.00 0.00 3.41
571 582 4.213564 AGTTTGAGAAGTAGGCTGGATG 57.786 45.455 0.00 0.00 0.00 3.51
572 583 3.054802 AGTTTGAGAAGTAGGCTGGATGG 60.055 47.826 0.00 0.00 0.00 3.51
573 584 2.550277 TGAGAAGTAGGCTGGATGGA 57.450 50.000 0.00 0.00 0.00 3.41
574 585 2.392662 TGAGAAGTAGGCTGGATGGAG 58.607 52.381 0.00 0.00 0.00 3.86
575 586 1.691434 GAGAAGTAGGCTGGATGGAGG 59.309 57.143 0.00 0.00 0.00 4.30
576 587 1.008938 AGAAGTAGGCTGGATGGAGGT 59.991 52.381 0.00 0.00 0.00 3.85
577 588 1.139853 GAAGTAGGCTGGATGGAGGTG 59.860 57.143 0.00 0.00 0.00 4.00
578 589 0.692419 AGTAGGCTGGATGGAGGTGG 60.692 60.000 0.00 0.00 0.00 4.61
579 590 0.691078 GTAGGCTGGATGGAGGTGGA 60.691 60.000 0.00 0.00 0.00 4.02
580 591 0.399091 TAGGCTGGATGGAGGTGGAG 60.399 60.000 0.00 0.00 0.00 3.86
581 592 2.191641 GCTGGATGGAGGTGGAGC 59.808 66.667 0.00 0.00 0.00 4.70
582 593 2.673200 GCTGGATGGAGGTGGAGCA 61.673 63.158 0.00 0.00 0.00 4.26
583 594 1.525923 CTGGATGGAGGTGGAGCAG 59.474 63.158 0.00 0.00 0.00 4.24
584 595 1.980784 CTGGATGGAGGTGGAGCAGG 61.981 65.000 0.00 0.00 0.00 4.85
585 596 1.690633 GGATGGAGGTGGAGCAGGA 60.691 63.158 0.00 0.00 0.00 3.86
586 597 1.524482 GATGGAGGTGGAGCAGGAC 59.476 63.158 0.00 0.00 0.00 3.85
587 598 2.303549 GATGGAGGTGGAGCAGGACG 62.304 65.000 0.00 0.00 0.00 4.79
588 599 4.459089 GGAGGTGGAGCAGGACGC 62.459 72.222 0.00 0.00 42.91 5.19
605 616 3.181967 CGTTCCGCTCGAAGCAGG 61.182 66.667 7.47 8.67 42.58 4.85
606 617 3.491652 GTTCCGCTCGAAGCAGGC 61.492 66.667 7.47 0.00 42.58 4.85
621 632 4.778143 GGCGCCCGACCAGTGATT 62.778 66.667 18.11 0.00 0.00 2.57
622 633 3.195698 GCGCCCGACCAGTGATTC 61.196 66.667 0.00 0.00 0.00 2.52
623 634 2.885644 CGCCCGACCAGTGATTCG 60.886 66.667 7.04 7.04 34.93 3.34
624 635 2.577059 GCCCGACCAGTGATTCGA 59.423 61.111 13.81 0.00 37.43 3.71
625 636 1.519455 GCCCGACCAGTGATTCGAG 60.519 63.158 13.81 3.98 37.43 4.04
626 637 1.945354 GCCCGACCAGTGATTCGAGA 61.945 60.000 13.81 0.00 37.43 4.04
627 638 0.747255 CCCGACCAGTGATTCGAGAT 59.253 55.000 13.81 0.00 37.43 2.75
628 639 1.269309 CCCGACCAGTGATTCGAGATC 60.269 57.143 13.81 0.00 37.43 2.75
629 640 1.405463 CCGACCAGTGATTCGAGATCA 59.595 52.381 13.81 6.28 37.43 2.92
630 641 2.035193 CCGACCAGTGATTCGAGATCAT 59.965 50.000 13.81 0.00 37.43 2.45
631 642 3.304257 CGACCAGTGATTCGAGATCATC 58.696 50.000 11.63 1.57 37.43 2.92
632 643 3.004210 CGACCAGTGATTCGAGATCATCT 59.996 47.826 11.63 0.00 37.43 2.90
633 644 4.297510 GACCAGTGATTCGAGATCATCTG 58.702 47.826 18.95 18.95 32.34 2.90
634 645 3.703556 ACCAGTGATTCGAGATCATCTGT 59.296 43.478 21.09 13.85 31.49 3.41
635 646 4.202101 ACCAGTGATTCGAGATCATCTGTC 60.202 45.833 21.09 10.14 31.49 3.51
636 647 4.202090 CCAGTGATTCGAGATCATCTGTCA 60.202 45.833 21.09 0.00 31.49 3.58
637 648 5.509332 CCAGTGATTCGAGATCATCTGTCAT 60.509 44.000 21.09 0.00 31.49 3.06
638 649 5.402867 CAGTGATTCGAGATCATCTGTCATG 59.597 44.000 18.37 0.00 0.00 3.07
639 650 4.150274 GTGATTCGAGATCATCTGTCATGC 59.850 45.833 11.63 0.00 0.00 4.06
640 651 4.038883 TGATTCGAGATCATCTGTCATGCT 59.961 41.667 0.00 0.00 0.00 3.79
641 652 4.397481 TTCGAGATCATCTGTCATGCTT 57.603 40.909 0.00 0.00 0.00 3.91
642 653 4.397481 TCGAGATCATCTGTCATGCTTT 57.603 40.909 0.00 0.00 0.00 3.51
643 654 4.117685 TCGAGATCATCTGTCATGCTTTG 58.882 43.478 0.00 0.00 0.00 2.77
644 655 4.117685 CGAGATCATCTGTCATGCTTTGA 58.882 43.478 0.00 0.00 0.00 2.69
663 674 9.486497 TGCTTTGACATTGATTTTATTTTAGCA 57.514 25.926 0.00 0.00 0.00 3.49
680 691 7.861176 TTTTAGCATATTCGGTTTGTTGAAC 57.139 32.000 0.00 0.00 37.53 3.18
681 692 6.811253 TTAGCATATTCGGTTTGTTGAACT 57.189 33.333 0.00 0.00 38.35 3.01
682 693 7.908827 TTAGCATATTCGGTTTGTTGAACTA 57.091 32.000 0.00 0.00 38.35 2.24
683 694 8.500753 TTAGCATATTCGGTTTGTTGAACTAT 57.499 30.769 0.00 0.00 38.35 2.12
684 695 6.785191 AGCATATTCGGTTTGTTGAACTATG 58.215 36.000 0.00 0.00 38.35 2.23
685 696 6.597672 AGCATATTCGGTTTGTTGAACTATGA 59.402 34.615 0.00 0.00 38.35 2.15
686 697 7.283127 AGCATATTCGGTTTGTTGAACTATGAT 59.717 33.333 0.00 0.00 38.35 2.45
687 698 7.915397 GCATATTCGGTTTGTTGAACTATGATT 59.085 33.333 0.00 0.00 38.35 2.57
688 699 9.787532 CATATTCGGTTTGTTGAACTATGATTT 57.212 29.630 0.00 0.00 38.35 2.17
689 700 9.787532 ATATTCGGTTTGTTGAACTATGATTTG 57.212 29.630 0.00 0.00 38.35 2.32
690 701 6.627395 TCGGTTTGTTGAACTATGATTTGT 57.373 33.333 0.00 0.00 38.35 2.83
691 702 7.033530 TCGGTTTGTTGAACTATGATTTGTT 57.966 32.000 0.00 0.00 38.35 2.83
692 703 7.484975 TCGGTTTGTTGAACTATGATTTGTTT 58.515 30.769 0.00 0.00 38.35 2.83
693 704 7.976734 TCGGTTTGTTGAACTATGATTTGTTTT 59.023 29.630 0.00 0.00 38.35 2.43
694 705 8.055402 CGGTTTGTTGAACTATGATTTGTTTTG 58.945 33.333 0.00 0.00 38.35 2.44
695 706 9.092876 GGTTTGTTGAACTATGATTTGTTTTGA 57.907 29.630 0.00 0.00 38.35 2.69
698 709 9.868277 TTGTTGAACTATGATTTGTTTTGAACT 57.132 25.926 0.00 0.00 0.00 3.01
699 710 9.868277 TGTTGAACTATGATTTGTTTTGAACTT 57.132 25.926 0.00 0.00 0.00 2.66
712 723 8.824159 TTGTTTTGAACTTTTGAATTCAGACA 57.176 26.923 8.41 0.00 36.26 3.41
713 724 8.824159 TGTTTTGAACTTTTGAATTCAGACAA 57.176 26.923 8.41 2.31 36.26 3.18
714 725 9.434420 TGTTTTGAACTTTTGAATTCAGACAAT 57.566 25.926 8.41 0.00 36.26 2.71
718 729 9.434420 TTGAACTTTTGAATTCAGACAATTTGT 57.566 25.926 8.41 0.63 36.26 2.83
737 748 9.303537 CAATTTGTATTGTATGATCAATGTGCA 57.696 29.630 0.00 0.00 38.32 4.57
739 750 8.859517 TTTGTATTGTATGATCAATGTGCATG 57.140 30.769 0.00 0.00 38.32 4.06
740 751 7.804843 TGTATTGTATGATCAATGTGCATGA 57.195 32.000 0.00 0.00 38.32 3.07
741 752 8.223177 TGTATTGTATGATCAATGTGCATGAA 57.777 30.769 0.00 0.00 38.32 2.57
742 753 8.852135 TGTATTGTATGATCAATGTGCATGAAT 58.148 29.630 0.00 0.00 38.32 2.57
743 754 9.687210 GTATTGTATGATCAATGTGCATGAATT 57.313 29.630 0.00 0.00 38.32 2.17
744 755 7.995463 TTGTATGATCAATGTGCATGAATTG 57.005 32.000 0.00 11.48 35.52 2.32
745 756 7.170828 ATTGTATGATCAATGTGCATGAATTGC 59.829 33.333 0.00 0.00 42.42 3.56
761 772 7.606135 ATGAATTGCATGGATTTAAGGATCA 57.394 32.000 0.00 0.00 35.42 2.92
762 773 7.046292 TGAATTGCATGGATTTAAGGATCAG 57.954 36.000 0.00 0.00 0.00 2.90
763 774 6.834969 TGAATTGCATGGATTTAAGGATCAGA 59.165 34.615 0.00 0.00 0.00 3.27
764 775 7.342541 TGAATTGCATGGATTTAAGGATCAGAA 59.657 33.333 0.00 0.00 0.00 3.02
765 776 7.850935 ATTGCATGGATTTAAGGATCAGAAT 57.149 32.000 0.00 0.00 0.00 2.40
766 777 7.664552 TTGCATGGATTTAAGGATCAGAATT 57.335 32.000 0.00 0.00 0.00 2.17
767 778 7.281040 TGCATGGATTTAAGGATCAGAATTC 57.719 36.000 0.00 0.00 0.00 2.17
768 779 6.016860 TGCATGGATTTAAGGATCAGAATTCG 60.017 38.462 0.00 0.00 0.00 3.34
769 780 6.205464 GCATGGATTTAAGGATCAGAATTCGA 59.795 38.462 0.00 1.20 0.00 3.71
770 781 7.255242 GCATGGATTTAAGGATCAGAATTCGAA 60.255 37.037 0.00 0.00 0.00 3.71
771 782 7.792374 TGGATTTAAGGATCAGAATTCGAAG 57.208 36.000 3.35 0.00 0.00 3.79
772 783 7.338710 TGGATTTAAGGATCAGAATTCGAAGT 58.661 34.615 3.35 0.00 0.00 3.01
773 784 8.482943 TGGATTTAAGGATCAGAATTCGAAGTA 58.517 33.333 3.35 0.00 0.00 2.24
774 785 9.495572 GGATTTAAGGATCAGAATTCGAAGTAT 57.504 33.333 3.35 0.00 0.00 2.12
776 787 9.838339 ATTTAAGGATCAGAATTCGAAGTATGT 57.162 29.630 18.38 7.43 0.00 2.29
777 788 8.648557 TTAAGGATCAGAATTCGAAGTATGTG 57.351 34.615 18.38 9.13 0.00 3.21
778 789 6.471233 AGGATCAGAATTCGAAGTATGTGA 57.529 37.500 18.38 13.59 0.00 3.58
779 790 6.878317 AGGATCAGAATTCGAAGTATGTGAA 58.122 36.000 18.38 1.67 0.00 3.18
780 791 7.504403 AGGATCAGAATTCGAAGTATGTGAAT 58.496 34.615 18.38 6.39 33.94 2.57
781 792 8.642432 AGGATCAGAATTCGAAGTATGTGAATA 58.358 33.333 18.38 0.96 32.32 1.75
782 793 9.429359 GGATCAGAATTCGAAGTATGTGAATAT 57.571 33.333 18.38 5.71 32.32 1.28
784 795 8.593492 TCAGAATTCGAAGTATGTGAATATGG 57.407 34.615 18.38 0.00 32.32 2.74
785 796 7.657354 TCAGAATTCGAAGTATGTGAATATGGG 59.343 37.037 18.38 0.00 32.32 4.00
786 797 6.936900 AGAATTCGAAGTATGTGAATATGGGG 59.063 38.462 3.35 0.00 32.32 4.96
787 798 5.623956 TTCGAAGTATGTGAATATGGGGT 57.376 39.130 0.00 0.00 0.00 4.95
788 799 4.956085 TCGAAGTATGTGAATATGGGGTG 58.044 43.478 0.00 0.00 0.00 4.61
789 800 3.498397 CGAAGTATGTGAATATGGGGTGC 59.502 47.826 0.00 0.00 0.00 5.01
790 801 4.460263 GAAGTATGTGAATATGGGGTGCA 58.540 43.478 0.00 0.00 0.00 4.57
791 802 4.518278 AGTATGTGAATATGGGGTGCAA 57.482 40.909 0.00 0.00 0.00 4.08
792 803 4.207165 AGTATGTGAATATGGGGTGCAAC 58.793 43.478 0.00 0.00 0.00 4.17
793 804 2.593925 TGTGAATATGGGGTGCAACA 57.406 45.000 3.06 0.00 39.98 3.33
794 805 2.166829 TGTGAATATGGGGTGCAACAC 58.833 47.619 3.06 0.00 41.97 3.32
803 814 2.203153 GTGCAACACACGAGGGGT 60.203 61.111 0.00 0.00 40.07 4.95
804 815 2.110213 TGCAACACACGAGGGGTC 59.890 61.111 0.00 0.00 0.00 4.46
805 816 3.041940 GCAACACACGAGGGGTCG 61.042 66.667 0.00 0.00 39.31 4.79
806 817 2.732016 CAACACACGAGGGGTCGA 59.268 61.111 1.09 0.00 36.85 4.20
807 818 1.663702 CAACACACGAGGGGTCGAC 60.664 63.158 7.13 7.13 36.85 4.20
808 819 3.203546 AACACACGAGGGGTCGACG 62.204 63.158 9.92 0.00 36.85 5.12
809 820 4.415332 CACACGAGGGGTCGACGG 62.415 72.222 9.92 0.00 36.85 4.79
816 827 4.994471 GGGGTCGACGGGCGTTTT 62.994 66.667 9.92 0.00 41.80 2.43
817 828 2.974148 GGGTCGACGGGCGTTTTT 60.974 61.111 9.92 0.00 41.80 1.94
837 848 4.655440 TTTATGAACACATTCGGACACG 57.345 40.909 0.00 0.00 37.69 4.49
838 849 0.796312 ATGAACACATTCGGACACGC 59.204 50.000 0.00 0.00 40.69 5.34
839 850 1.225376 TGAACACATTCGGACACGCC 61.225 55.000 0.00 0.00 40.69 5.68
840 851 1.908066 GAACACATTCGGACACGCCC 61.908 60.000 0.00 0.00 40.69 6.13
841 852 2.358125 CACATTCGGACACGCCCA 60.358 61.111 0.00 0.00 40.69 5.36
842 853 2.358247 ACATTCGGACACGCCCAC 60.358 61.111 0.00 0.00 40.69 4.61
844 855 4.752879 ATTCGGACACGCCCACGG 62.753 66.667 0.00 0.00 46.04 4.94
849 860 4.041917 GACACGCCCACGGACGTA 62.042 66.667 0.00 0.00 46.04 3.57
850 861 3.346631 GACACGCCCACGGACGTAT 62.347 63.158 0.00 0.00 46.04 3.06
851 862 1.992233 GACACGCCCACGGACGTATA 61.992 60.000 0.00 0.00 46.04 1.47
852 863 1.298863 CACGCCCACGGACGTATAG 60.299 63.158 0.00 0.00 46.04 1.31
853 864 1.451927 ACGCCCACGGACGTATAGA 60.452 57.895 0.00 0.00 46.04 1.98
854 865 1.281960 CGCCCACGGACGTATAGAG 59.718 63.158 0.00 0.00 34.97 2.43
855 866 1.442526 CGCCCACGGACGTATAGAGT 61.443 60.000 0.00 0.00 34.97 3.24
856 867 0.030369 GCCCACGGACGTATAGAGTG 59.970 60.000 0.00 0.00 0.00 3.51
857 868 0.030369 CCCACGGACGTATAGAGTGC 59.970 60.000 0.00 0.00 0.00 4.40
858 869 0.030369 CCACGGACGTATAGAGTGCC 59.970 60.000 0.00 0.00 0.00 5.01
859 870 0.316772 CACGGACGTATAGAGTGCCG 60.317 60.000 6.52 6.52 43.95 5.69
860 871 0.462581 ACGGACGTATAGAGTGCCGA 60.463 55.000 14.07 0.00 41.11 5.54
861 872 0.235144 CGGACGTATAGAGTGCCGAG 59.765 60.000 2.16 0.00 41.11 4.63
862 873 1.590932 GGACGTATAGAGTGCCGAGA 58.409 55.000 0.00 0.00 0.00 4.04
863 874 2.152830 GGACGTATAGAGTGCCGAGAT 58.847 52.381 0.00 0.00 0.00 2.75
864 875 2.553172 GGACGTATAGAGTGCCGAGATT 59.447 50.000 0.00 0.00 0.00 2.40
865 876 3.004524 GGACGTATAGAGTGCCGAGATTT 59.995 47.826 0.00 0.00 0.00 2.17
866 877 3.966154 ACGTATAGAGTGCCGAGATTTG 58.034 45.455 0.00 0.00 0.00 2.32
867 878 2.726760 CGTATAGAGTGCCGAGATTTGC 59.273 50.000 0.00 0.00 0.00 3.68
868 879 2.988010 ATAGAGTGCCGAGATTTGCA 57.012 45.000 0.00 0.00 34.54 4.08
869 880 2.760634 TAGAGTGCCGAGATTTGCAA 57.239 45.000 0.00 0.00 39.57 4.08
870 881 1.446907 AGAGTGCCGAGATTTGCAAG 58.553 50.000 0.00 0.00 39.57 4.01
871 882 1.160137 GAGTGCCGAGATTTGCAAGT 58.840 50.000 0.00 0.00 39.57 3.16
872 883 1.129437 GAGTGCCGAGATTTGCAAGTC 59.871 52.381 13.69 13.69 39.57 3.01
873 884 0.169009 GTGCCGAGATTTGCAAGTCC 59.831 55.000 17.41 8.88 39.57 3.85
874 885 0.250684 TGCCGAGATTTGCAAGTCCA 60.251 50.000 17.41 6.45 33.87 4.02
875 886 0.449388 GCCGAGATTTGCAAGTCCAG 59.551 55.000 17.41 11.74 0.00 3.86
876 887 1.813513 CCGAGATTTGCAAGTCCAGT 58.186 50.000 17.41 0.14 0.00 4.00
877 888 2.154462 CCGAGATTTGCAAGTCCAGTT 58.846 47.619 17.41 0.00 0.00 3.16
878 889 2.160417 CCGAGATTTGCAAGTCCAGTTC 59.840 50.000 17.41 8.30 0.00 3.01
879 890 3.070018 CGAGATTTGCAAGTCCAGTTCT 58.930 45.455 17.41 0.00 0.00 3.01
880 891 4.245660 CGAGATTTGCAAGTCCAGTTCTA 58.754 43.478 17.41 0.00 0.00 2.10
881 892 4.328440 CGAGATTTGCAAGTCCAGTTCTAG 59.672 45.833 17.41 0.00 0.00 2.43
882 893 5.482908 GAGATTTGCAAGTCCAGTTCTAGA 58.517 41.667 17.41 0.00 0.00 2.43
883 894 6.059787 AGATTTGCAAGTCCAGTTCTAGAT 57.940 37.500 17.41 0.00 0.00 1.98
884 895 5.879223 AGATTTGCAAGTCCAGTTCTAGATG 59.121 40.000 17.41 0.00 0.00 2.90
885 896 2.977914 TGCAAGTCCAGTTCTAGATGC 58.022 47.619 0.00 0.00 0.00 3.91
886 897 2.568956 TGCAAGTCCAGTTCTAGATGCT 59.431 45.455 10.96 2.61 33.87 3.79
887 898 3.194062 GCAAGTCCAGTTCTAGATGCTC 58.806 50.000 0.00 0.00 0.00 4.26
888 899 3.118811 GCAAGTCCAGTTCTAGATGCTCT 60.119 47.826 0.00 0.00 0.00 4.09
889 900 4.098654 GCAAGTCCAGTTCTAGATGCTCTA 59.901 45.833 0.00 0.00 0.00 2.43
890 901 5.735922 GCAAGTCCAGTTCTAGATGCTCTAG 60.736 48.000 11.74 11.74 45.99 2.43
921 932 3.176578 CGTCACGCGCCGTACATT 61.177 61.111 5.73 0.00 38.32 2.71
922 933 2.722731 CGTCACGCGCCGTACATTT 61.723 57.895 5.73 0.00 38.32 2.32
943 954 3.168773 CCAACATTGGGAGTACGGG 57.831 57.895 2.43 0.00 44.70 5.28
944 955 0.393808 CCAACATTGGGAGTACGGGG 60.394 60.000 2.43 0.00 44.70 5.73
945 956 1.029947 CAACATTGGGAGTACGGGGC 61.030 60.000 0.00 0.00 0.00 5.80
946 957 2.192175 CATTGGGAGTACGGGGCC 59.808 66.667 0.00 0.00 0.00 5.80
949 960 4.700448 TGGGAGTACGGGGCCGAA 62.700 66.667 0.00 0.00 42.83 4.30
950 961 4.152964 GGGAGTACGGGGCCGAAC 62.153 72.222 0.00 0.00 42.83 3.95
1017 1048 2.881266 CTCCCACACAACACACGCG 61.881 63.158 3.53 3.53 0.00 6.01
1020 1051 4.936248 CACACAACACACGCGGCG 62.936 66.667 22.36 22.36 0.00 6.46
1065 1102 4.500375 CCCTCAAGAAAGCAAGAAAAGTGG 60.500 45.833 0.00 0.00 0.00 4.00
1066 1103 4.098501 CCTCAAGAAAGCAAGAAAAGTGGT 59.901 41.667 0.00 0.00 0.00 4.16
1067 1104 5.299279 CCTCAAGAAAGCAAGAAAAGTGGTA 59.701 40.000 0.00 0.00 0.00 3.25
1232 1290 4.933064 CTCGACCGCTGGATCGCC 62.933 72.222 1.50 0.00 38.24 5.54
1293 1354 1.663379 CTCCCACGCCGACATCTACA 61.663 60.000 0.00 0.00 0.00 2.74
1299 1360 1.939785 GCCGACATCTACAGCGACG 60.940 63.158 0.00 0.00 0.00 5.12
1453 1515 3.468140 GGGTACTGGCGGGAGGAC 61.468 72.222 0.00 0.00 0.00 3.85
1504 1571 3.692593 AGAGCTACTTCGTCTTCTTCCTC 59.307 47.826 0.00 0.00 0.00 3.71
1505 1572 2.420722 AGCTACTTCGTCTTCTTCCTCG 59.579 50.000 0.00 0.00 0.00 4.63
1506 1573 2.478200 GCTACTTCGTCTTCTTCCTCGG 60.478 54.545 0.00 0.00 0.00 4.63
1507 1574 0.244178 ACTTCGTCTTCTTCCTCGGC 59.756 55.000 0.00 0.00 0.00 5.54
1508 1575 0.458716 CTTCGTCTTCTTCCTCGGCC 60.459 60.000 0.00 0.00 0.00 6.13
1509 1576 1.885163 TTCGTCTTCTTCCTCGGCCC 61.885 60.000 0.00 0.00 0.00 5.80
1510 1577 2.585153 GTCTTCTTCCTCGGCCCC 59.415 66.667 0.00 0.00 0.00 5.80
1511 1578 3.075005 TCTTCTTCCTCGGCCCCG 61.075 66.667 0.00 0.00 41.35 5.73
1512 1579 4.162690 CTTCTTCCTCGGCCCCGG 62.163 72.222 6.90 0.00 40.25 5.73
1547 1614 0.037232 GAAGGAGAAGACACCGTGGG 60.037 60.000 3.03 0.00 32.13 4.61
1882 1958 4.760047 CAGAACTCCACGGGGGCG 62.760 72.222 2.42 0.00 36.21 6.13
1941 2086 3.782042 GGCGAAGACGGTCATGAC 58.218 61.111 17.91 17.91 40.15 3.06
2079 2298 5.879777 GGTTGATTTGGGGGATTAATTTGTG 59.120 40.000 0.00 0.00 0.00 3.33
2103 2322 1.032014 TGGGTTCTTGCAGTTTGCTC 58.968 50.000 2.48 0.00 45.31 4.26
2118 2550 6.380995 CAGTTTGCTCAACATTTAGTATGCA 58.619 36.000 0.00 0.00 37.93 3.96
2119 2551 7.031372 CAGTTTGCTCAACATTTAGTATGCAT 58.969 34.615 3.79 3.79 37.93 3.96
2120 2552 8.183536 CAGTTTGCTCAACATTTAGTATGCATA 58.816 33.333 1.16 1.16 37.93 3.14
2174 3216 7.121974 ACTCTGTTTGAACGTTGATTATCTG 57.878 36.000 5.00 0.00 0.00 2.90
2180 3222 5.469373 TGAACGTTGATTATCTGTCATGC 57.531 39.130 5.00 0.00 0.00 4.06
2189 3232 1.002366 ATCTGTCATGCGCTTTCGAC 58.998 50.000 9.73 10.35 38.10 4.20
2225 3269 7.795431 TTGACGAAAGAAATGTTGATTATGC 57.205 32.000 0.00 0.00 0.00 3.14
2248 3292 3.094572 CCCAGTTTTCAGATTCCTGCAT 58.905 45.455 0.00 0.00 40.20 3.96
2285 3329 8.637986 TGAAAGTTTTAACATTATGCTTCCAGT 58.362 29.630 0.00 0.00 0.00 4.00
2307 3351 6.088217 CAGTAAGACAAGTGTAGATTGTGTCG 59.912 42.308 0.00 0.00 42.68 4.35
2337 3381 9.514093 TCTACTCCTAGAGATCATCTATGGTAT 57.486 37.037 0.00 0.00 39.82 2.73
2368 3416 2.297701 TGGCAAGAGACTGTTTCCAAC 58.702 47.619 1.10 0.00 0.00 3.77
2450 3498 6.705381 CCTAGGAGAATCTGACATGAAACATC 59.295 42.308 1.05 0.00 33.73 3.06
2486 3534 0.943835 GCGGTTGTGTTTTCATGCCC 60.944 55.000 0.00 0.00 0.00 5.36
2581 3629 8.672815 CACATTAAAAATCAAAACAACACCCTT 58.327 29.630 0.00 0.00 0.00 3.95
2585 3633 9.892130 TTAAAAATCAAAACAACACCCTTACAT 57.108 25.926 0.00 0.00 0.00 2.29
2587 3635 9.892130 AAAAATCAAAACAACACCCTTACATTA 57.108 25.926 0.00 0.00 0.00 1.90
2595 3643 9.892130 AAACAACACCCTTACATTAAAAATCAA 57.108 25.926 0.00 0.00 0.00 2.57
2681 3750 6.914215 GTGCATCATCACACAAATATGTAAGG 59.086 38.462 0.00 0.00 37.82 2.69
2727 3837 2.765689 TGTCCCATTCACCAAAGGTT 57.234 45.000 0.00 0.00 31.02 3.50
2728 3838 2.593026 TGTCCCATTCACCAAAGGTTC 58.407 47.619 0.00 0.00 31.02 3.62
2730 3840 3.396276 TGTCCCATTCACCAAAGGTTCTA 59.604 43.478 0.00 0.00 31.02 2.10
2731 3841 4.010349 GTCCCATTCACCAAAGGTTCTAG 58.990 47.826 0.00 0.00 31.02 2.43
2732 3842 3.655777 TCCCATTCACCAAAGGTTCTAGT 59.344 43.478 0.00 0.00 31.02 2.57
2733 3843 4.105697 TCCCATTCACCAAAGGTTCTAGTT 59.894 41.667 0.00 0.00 31.02 2.24
2734 3844 4.218417 CCCATTCACCAAAGGTTCTAGTTG 59.782 45.833 0.00 0.00 31.02 3.16
2735 3845 5.070001 CCATTCACCAAAGGTTCTAGTTGA 58.930 41.667 0.00 0.00 31.02 3.18
2736 3846 5.048713 CCATTCACCAAAGGTTCTAGTTGAC 60.049 44.000 0.00 0.00 31.02 3.18
2737 3847 4.764050 TCACCAAAGGTTCTAGTTGACA 57.236 40.909 0.00 0.00 31.02 3.58
2770 3880 3.243068 CGTTTTCTCCAACTTCCAACAGG 60.243 47.826 0.00 0.00 0.00 4.00
2796 7604 6.299805 AGTGCCTGATCACAAGATAAACTA 57.700 37.500 0.00 0.00 39.35 2.24
2810 7618 9.507329 ACAAGATAAACTAACATATGCATAGGG 57.493 33.333 21.39 13.72 0.00 3.53
2811 7619 9.725019 CAAGATAAACTAACATATGCATAGGGA 57.275 33.333 21.39 8.85 0.00 4.20
2812 7620 9.726438 AAGATAAACTAACATATGCATAGGGAC 57.274 33.333 21.39 3.51 0.00 4.46
2836 7644 3.737032 TTGACATGTAGTGACAACGGA 57.263 42.857 0.00 0.00 39.59 4.69
2837 7645 3.953712 TGACATGTAGTGACAACGGAT 57.046 42.857 0.00 0.00 39.59 4.18
2838 7646 3.584834 TGACATGTAGTGACAACGGATG 58.415 45.455 0.00 0.00 39.59 3.51
2839 7647 3.257127 TGACATGTAGTGACAACGGATGA 59.743 43.478 0.00 0.00 39.59 2.92
2840 7648 4.081697 TGACATGTAGTGACAACGGATGAT 60.082 41.667 0.00 0.00 39.59 2.45
2841 7649 4.433615 ACATGTAGTGACAACGGATGATC 58.566 43.478 0.00 0.00 39.59 2.92
2842 7650 4.081697 ACATGTAGTGACAACGGATGATCA 60.082 41.667 0.00 0.00 39.59 2.92
2843 7651 4.529109 TGTAGTGACAACGGATGATCAA 57.471 40.909 0.00 0.00 30.68 2.57
2844 7652 4.494484 TGTAGTGACAACGGATGATCAAG 58.506 43.478 0.00 0.00 30.68 3.02
2845 7653 3.961480 AGTGACAACGGATGATCAAGA 57.039 42.857 0.00 0.00 0.00 3.02
2846 7654 3.854666 AGTGACAACGGATGATCAAGAG 58.145 45.455 0.00 0.00 0.00 2.85
2847 7655 2.349886 GTGACAACGGATGATCAAGAGC 59.650 50.000 0.00 0.00 0.00 4.09
2848 7656 2.028203 TGACAACGGATGATCAAGAGCA 60.028 45.455 0.00 0.00 0.00 4.26
2849 7657 2.606725 GACAACGGATGATCAAGAGCAG 59.393 50.000 0.00 0.00 0.00 4.24
2850 7658 2.027745 ACAACGGATGATCAAGAGCAGT 60.028 45.455 0.00 0.00 0.00 4.40
2851 7659 2.306341 ACGGATGATCAAGAGCAGTG 57.694 50.000 0.00 0.00 0.00 3.66
2852 7660 0.935898 CGGATGATCAAGAGCAGTGC 59.064 55.000 7.13 7.13 0.00 4.40
2853 7661 1.472904 CGGATGATCAAGAGCAGTGCT 60.473 52.381 19.86 19.86 43.88 4.40
2854 7662 2.223900 CGGATGATCAAGAGCAGTGCTA 60.224 50.000 19.77 1.93 39.88 3.49
2855 7663 3.554544 CGGATGATCAAGAGCAGTGCTAT 60.555 47.826 19.77 13.17 39.88 2.97
2856 7664 4.321527 CGGATGATCAAGAGCAGTGCTATA 60.322 45.833 19.77 0.12 39.88 1.31
2857 7665 4.928615 GGATGATCAAGAGCAGTGCTATAC 59.071 45.833 19.77 5.83 39.88 1.47
2858 7666 5.510349 GGATGATCAAGAGCAGTGCTATACA 60.510 44.000 19.77 13.45 39.88 2.29
2878 7686 4.228451 CGATAGTGGCGGACGATG 57.772 61.111 0.00 0.00 0.00 3.84
2879 7687 1.359117 CGATAGTGGCGGACGATGT 59.641 57.895 0.00 0.00 0.00 3.06
2880 7688 0.934901 CGATAGTGGCGGACGATGTG 60.935 60.000 0.00 0.00 0.00 3.21
2881 7689 0.102481 GATAGTGGCGGACGATGTGT 59.898 55.000 0.00 0.00 0.00 3.72
2882 7690 0.179111 ATAGTGGCGGACGATGTGTG 60.179 55.000 0.00 0.00 0.00 3.82
2883 7691 2.829043 TAGTGGCGGACGATGTGTGC 62.829 60.000 0.00 0.00 35.21 4.57
2884 7692 4.306967 TGGCGGACGATGTGTGCA 62.307 61.111 0.00 0.00 39.19 4.57
2885 7693 3.788766 GGCGGACGATGTGTGCAC 61.789 66.667 10.75 10.75 39.19 4.57
2886 7694 4.134187 GCGGACGATGTGTGCACG 62.134 66.667 13.13 1.70 39.19 5.34
2887 7695 2.430075 CGGACGATGTGTGCACGA 60.430 61.111 13.13 0.93 39.19 4.35
2888 7696 2.716828 CGGACGATGTGTGCACGAC 61.717 63.158 13.13 11.94 39.19 4.34
2889 7697 1.663388 GGACGATGTGTGCACGACA 60.663 57.895 19.59 19.59 39.04 4.35
2890 7698 1.218875 GGACGATGTGTGCACGACAA 61.219 55.000 20.68 4.91 39.04 3.18
2891 7699 0.790207 GACGATGTGTGCACGACAAT 59.210 50.000 20.68 9.06 35.91 2.71
2892 7700 0.512518 ACGATGTGTGCACGACAATG 59.487 50.000 20.68 17.90 35.91 2.82
2893 7701 0.790495 CGATGTGTGCACGACAATGC 60.790 55.000 20.68 13.97 46.32 3.56
2900 7708 2.645411 GCACGACAATGCAATCAGC 58.355 52.632 0.00 0.00 45.39 4.26
2901 7709 0.169672 GCACGACAATGCAATCAGCT 59.830 50.000 0.00 0.00 45.39 4.24
2902 7710 1.792993 GCACGACAATGCAATCAGCTC 60.793 52.381 0.00 0.00 45.39 4.09
2903 7711 1.089920 ACGACAATGCAATCAGCTCC 58.910 50.000 0.00 0.00 45.94 4.70
2904 7712 0.027194 CGACAATGCAATCAGCTCCG 59.973 55.000 0.00 0.00 45.94 4.63
2905 7713 1.089920 GACAATGCAATCAGCTCCGT 58.910 50.000 0.00 0.00 45.94 4.69
2906 7714 1.063174 GACAATGCAATCAGCTCCGTC 59.937 52.381 0.00 0.00 45.94 4.79
2907 7715 0.379669 CAATGCAATCAGCTCCGTCC 59.620 55.000 0.00 0.00 45.94 4.79
2908 7716 0.035152 AATGCAATCAGCTCCGTCCA 60.035 50.000 0.00 0.00 45.94 4.02
2909 7717 0.182061 ATGCAATCAGCTCCGTCCAT 59.818 50.000 0.00 0.00 45.94 3.41
2910 7718 0.035152 TGCAATCAGCTCCGTCCATT 60.035 50.000 0.00 0.00 45.94 3.16
2911 7719 0.379669 GCAATCAGCTCCGTCCATTG 59.620 55.000 0.00 0.00 41.15 2.82
2912 7720 0.379669 CAATCAGCTCCGTCCATTGC 59.620 55.000 0.00 0.00 0.00 3.56
2913 7721 0.035152 AATCAGCTCCGTCCATTGCA 60.035 50.000 0.00 0.00 0.00 4.08
2914 7722 0.182061 ATCAGCTCCGTCCATTGCAT 59.818 50.000 0.00 0.00 0.00 3.96
2915 7723 0.745486 TCAGCTCCGTCCATTGCATG 60.745 55.000 0.00 0.00 0.00 4.06
2946 7754 2.203126 GCAGGCCGCTAGATGCTT 60.203 61.111 11.61 0.00 40.11 3.91
2947 7755 1.069765 GCAGGCCGCTAGATGCTTA 59.930 57.895 11.61 0.00 40.11 3.09
2948 7756 0.321122 GCAGGCCGCTAGATGCTTAT 60.321 55.000 11.61 0.00 40.11 1.73
2949 7757 1.719600 CAGGCCGCTAGATGCTTATC 58.280 55.000 0.00 0.00 40.11 1.75
2950 7758 0.244994 AGGCCGCTAGATGCTTATCG 59.755 55.000 0.00 0.00 40.11 2.92
2951 7759 0.038159 GGCCGCTAGATGCTTATCGT 60.038 55.000 0.00 0.00 40.11 3.73
2952 7760 1.063806 GCCGCTAGATGCTTATCGTG 58.936 55.000 0.00 0.00 40.11 4.35
2953 7761 1.063806 CCGCTAGATGCTTATCGTGC 58.936 55.000 0.00 0.00 40.11 5.34
2954 7762 1.602920 CCGCTAGATGCTTATCGTGCA 60.603 52.381 0.00 0.00 44.95 4.57
2955 7763 1.718178 CGCTAGATGCTTATCGTGCAG 59.282 52.381 0.00 0.00 44.04 4.41
2956 7764 2.748605 GCTAGATGCTTATCGTGCAGT 58.251 47.619 0.00 0.00 44.04 4.40
2957 7765 2.474359 GCTAGATGCTTATCGTGCAGTG 59.526 50.000 0.00 0.00 44.04 3.66
2958 7766 1.945387 AGATGCTTATCGTGCAGTGG 58.055 50.000 0.00 0.00 44.04 4.00
2959 7767 1.208052 AGATGCTTATCGTGCAGTGGT 59.792 47.619 0.00 0.00 44.04 4.16
2960 7768 1.594862 GATGCTTATCGTGCAGTGGTC 59.405 52.381 0.00 0.00 44.04 4.02
2961 7769 0.735978 TGCTTATCGTGCAGTGGTCG 60.736 55.000 0.00 0.00 35.31 4.79
2962 7770 0.736325 GCTTATCGTGCAGTGGTCGT 60.736 55.000 0.00 0.00 0.00 4.34
2963 7771 0.992072 CTTATCGTGCAGTGGTCGTG 59.008 55.000 0.00 0.00 0.00 4.35
2964 7772 1.011968 TTATCGTGCAGTGGTCGTGC 61.012 55.000 0.00 0.00 41.59 5.34
2968 7776 2.110835 TGCAGTGGTCGTGCACAT 59.889 55.556 18.64 0.00 45.96 3.21
2969 7777 1.369321 TGCAGTGGTCGTGCACATA 59.631 52.632 18.64 0.42 45.96 2.29
2970 7778 0.036483 TGCAGTGGTCGTGCACATAT 60.036 50.000 18.64 0.00 45.96 1.78
2971 7779 1.086696 GCAGTGGTCGTGCACATATT 58.913 50.000 18.64 0.00 40.86 1.28
2972 7780 1.468520 GCAGTGGTCGTGCACATATTT 59.531 47.619 18.64 0.00 40.86 1.40
2973 7781 2.728846 GCAGTGGTCGTGCACATATTTG 60.729 50.000 18.64 8.58 40.86 2.32
2974 7782 2.483877 CAGTGGTCGTGCACATATTTGT 59.516 45.455 18.64 0.00 36.15 2.83
2975 7783 2.742053 AGTGGTCGTGCACATATTTGTC 59.258 45.455 18.64 0.00 32.34 3.18
2976 7784 1.729517 TGGTCGTGCACATATTTGTCG 59.270 47.619 18.64 0.00 32.34 4.35
2977 7785 1.730064 GGTCGTGCACATATTTGTCGT 59.270 47.619 18.64 0.00 32.34 4.34
2978 7786 2.222729 GGTCGTGCACATATTTGTCGTC 60.223 50.000 18.64 0.00 32.34 4.20
2979 7787 2.666508 GTCGTGCACATATTTGTCGTCT 59.333 45.455 18.64 0.00 32.34 4.18
2980 7788 2.666022 TCGTGCACATATTTGTCGTCTG 59.334 45.455 18.64 0.00 32.34 3.51
2981 7789 2.774007 GTGCACATATTTGTCGTCTGC 58.226 47.619 13.17 0.00 32.34 4.26
2982 7790 1.393196 TGCACATATTTGTCGTCTGCG 59.607 47.619 0.00 0.00 32.34 5.18
2983 7791 1.658596 GCACATATTTGTCGTCTGCGA 59.341 47.619 0.00 0.00 45.79 5.10
3030 7838 0.521867 CAAATGCGCCATGTCACTCG 60.522 55.000 4.18 0.00 0.00 4.18
3035 7843 1.869574 CGCCATGTCACTCGAGACG 60.870 63.158 21.68 9.93 41.41 4.18
3047 7855 1.154131 CGAGACGCTCTGTGTGAGG 60.154 63.158 5.53 0.00 42.87 3.86
3204 8012 0.105593 CCTGATGCGCTATGACCTGT 59.894 55.000 9.73 0.00 0.00 4.00
3212 8020 1.129251 CGCTATGACCTGTTGCTGTTG 59.871 52.381 0.00 0.00 0.00 3.33
3213 8021 2.426522 GCTATGACCTGTTGCTGTTGA 58.573 47.619 0.00 0.00 0.00 3.18
3214 8022 2.813754 GCTATGACCTGTTGCTGTTGAA 59.186 45.455 0.00 0.00 0.00 2.69
3215 8023 3.253188 GCTATGACCTGTTGCTGTTGAAA 59.747 43.478 0.00 0.00 0.00 2.69
3216 8024 3.996150 ATGACCTGTTGCTGTTGAAAG 57.004 42.857 0.00 0.00 0.00 2.62
3217 8025 2.023673 TGACCTGTTGCTGTTGAAAGG 58.976 47.619 0.00 0.00 0.00 3.11
3218 8026 2.297701 GACCTGTTGCTGTTGAAAGGA 58.702 47.619 0.00 0.00 0.00 3.36
3219 8027 2.887152 GACCTGTTGCTGTTGAAAGGAT 59.113 45.455 0.00 0.00 0.00 3.24
3220 8028 2.887152 ACCTGTTGCTGTTGAAAGGATC 59.113 45.455 0.00 0.00 0.00 3.36
3221 8029 2.095567 CCTGTTGCTGTTGAAAGGATCG 60.096 50.000 0.00 0.00 0.00 3.69
3222 8030 2.807967 CTGTTGCTGTTGAAAGGATCGA 59.192 45.455 0.00 0.00 0.00 3.59
3223 8031 3.411446 TGTTGCTGTTGAAAGGATCGAT 58.589 40.909 0.00 0.00 0.00 3.59
3224 8032 4.574892 TGTTGCTGTTGAAAGGATCGATA 58.425 39.130 0.00 0.00 0.00 2.92
3225 8033 5.185454 TGTTGCTGTTGAAAGGATCGATAT 58.815 37.500 0.00 0.00 0.00 1.63
3226 8034 5.065090 TGTTGCTGTTGAAAGGATCGATATG 59.935 40.000 0.00 0.00 0.00 1.78
3227 8035 4.129380 TGCTGTTGAAAGGATCGATATGG 58.871 43.478 0.00 0.00 0.00 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 2.588877 CGCCTATTCGGGTGGCTG 60.589 66.667 0.00 0.00 44.09 4.85
39 40 2.284798 CTGCTAGACCGCCGTGACAT 62.285 60.000 0.00 0.00 0.00 3.06
40 41 2.986979 TGCTAGACCGCCGTGACA 60.987 61.111 0.00 0.00 0.00 3.58
51 52 4.503469 CCGTACAGGAGTCTATCTGCTAGA 60.503 50.000 0.00 0.00 42.90 2.43
54 55 2.577700 CCGTACAGGAGTCTATCTGCT 58.422 52.381 0.00 0.00 45.62 4.24
55 56 1.609555 CCCGTACAGGAGTCTATCTGC 59.390 57.143 5.46 0.00 45.00 4.26
85 86 4.215109 ACAAAATGCTTACCTTCACCAGT 58.785 39.130 0.00 0.00 0.00 4.00
87 88 5.009210 GTGTACAAAATGCTTACCTTCACCA 59.991 40.000 0.00 0.00 0.00 4.17
102 103 3.842007 TTTCCTCCTCGGTGTACAAAA 57.158 42.857 0.00 0.00 0.00 2.44
136 138 2.028130 CGCTCCCTCATCAAGTCTACT 58.972 52.381 0.00 0.00 0.00 2.57
137 139 1.067821 CCGCTCCCTCATCAAGTCTAC 59.932 57.143 0.00 0.00 0.00 2.59
150 152 1.227674 GTGGATGATGACCGCTCCC 60.228 63.158 0.00 0.00 35.35 4.30
175 177 3.642778 CTACGTGCCCACCCTGACG 62.643 68.421 0.00 0.00 37.82 4.35
182 184 3.665675 CTCCCAGCTACGTGCCCAC 62.666 68.421 0.00 0.00 44.23 4.61
189 191 0.464036 TAACCATGCTCCCAGCTACG 59.536 55.000 0.00 0.00 42.97 3.51
191 193 0.469917 GCTAACCATGCTCCCAGCTA 59.530 55.000 0.00 0.00 42.97 3.32
207 210 2.201490 ATGGCCGCCCTAGAGCTA 59.799 61.111 7.03 0.00 0.00 3.32
234 237 0.249911 GTGACCACCTTGCTCTTCGT 60.250 55.000 0.00 0.00 0.00 3.85
238 241 1.194781 ATCCGTGACCACCTTGCTCT 61.195 55.000 0.00 0.00 0.00 4.09
273 276 0.320683 CCGGTGACACTGATGCTTCA 60.321 55.000 16.28 1.92 0.00 3.02
280 283 1.112916 TCTGAAGCCGGTGACACTGA 61.113 55.000 16.28 0.00 0.00 3.41
282 285 0.468226 TTTCTGAAGCCGGTGACACT 59.532 50.000 1.90 0.00 0.00 3.55
286 289 1.522668 CATGTTTCTGAAGCCGGTGA 58.477 50.000 1.90 0.00 0.00 4.02
291 294 2.496899 TCTCCCATGTTTCTGAAGCC 57.503 50.000 1.71 0.00 0.00 4.35
350 356 4.377708 ATCGACAGCTGGTGCGCA 62.378 61.111 19.93 5.66 45.42 6.09
367 373 1.066430 GTGCTCGGACAACCTTATGGA 60.066 52.381 0.81 0.00 37.04 3.41
371 377 1.290955 CGGTGCTCGGACAACCTTA 59.709 57.895 3.57 0.00 34.75 2.69
376 382 2.649034 GAGACGGTGCTCGGACAA 59.351 61.111 0.00 0.00 44.45 3.18
398 404 2.189521 GACCAATCCCGCATCGGT 59.810 61.111 4.47 0.00 46.80 4.69
407 413 0.030908 CTCTCTACCGCGACCAATCC 59.969 60.000 8.23 0.00 0.00 3.01
411 418 2.280404 ATCCCTCTCTACCGCGACCA 62.280 60.000 8.23 0.00 0.00 4.02
438 445 0.676736 GCTATCTAGAAGGCGCTGGT 59.323 55.000 7.64 0.00 0.00 4.00
440 447 1.611006 TCAGCTATCTAGAAGGCGCTG 59.389 52.381 20.69 20.69 44.45 5.18
450 457 1.516365 GCCCTCGCGTCAGCTATCTA 61.516 60.000 5.77 0.00 42.32 1.98
519 530 1.468506 TACACCAACCGCAGAGCTCA 61.469 55.000 17.77 0.00 0.00 4.26
531 542 6.826231 TCAAACTTCTTCATCAACTACACCAA 59.174 34.615 0.00 0.00 0.00 3.67
541 552 5.934625 GCCTACTTCTCAAACTTCTTCATCA 59.065 40.000 0.00 0.00 0.00 3.07
561 572 0.399091 CTCCACCTCCATCCAGCCTA 60.399 60.000 0.00 0.00 0.00 3.93
569 580 2.362369 CGTCCTGCTCCACCTCCAT 61.362 63.158 0.00 0.00 0.00 3.41
570 581 2.997315 CGTCCTGCTCCACCTCCA 60.997 66.667 0.00 0.00 0.00 3.86
571 582 4.459089 GCGTCCTGCTCCACCTCC 62.459 72.222 0.00 0.00 41.73 4.30
572 583 4.803426 CGCGTCCTGCTCCACCTC 62.803 72.222 0.00 0.00 43.27 3.85
574 585 4.681978 AACGCGTCCTGCTCCACC 62.682 66.667 14.44 0.00 43.27 4.61
575 586 3.112709 GAACGCGTCCTGCTCCAC 61.113 66.667 14.44 0.00 43.27 4.02
576 587 4.373116 GGAACGCGTCCTGCTCCA 62.373 66.667 19.45 0.00 43.98 3.86
604 615 4.778143 AATCACTGGTCGGGCGCC 62.778 66.667 21.18 21.18 0.00 6.53
605 616 3.195698 GAATCACTGGTCGGGCGC 61.196 66.667 0.00 0.00 0.00 6.53
606 617 2.885644 CGAATCACTGGTCGGGCG 60.886 66.667 0.00 0.00 33.62 6.13
607 618 1.519455 CTCGAATCACTGGTCGGGC 60.519 63.158 0.00 0.00 37.84 6.13
608 619 0.747255 ATCTCGAATCACTGGTCGGG 59.253 55.000 0.00 0.00 39.14 5.14
609 620 1.405463 TGATCTCGAATCACTGGTCGG 59.595 52.381 6.28 0.00 37.84 4.79
610 621 2.851805 TGATCTCGAATCACTGGTCG 57.148 50.000 6.28 0.00 38.62 4.79
611 622 4.202101 ACAGATGATCTCGAATCACTGGTC 60.202 45.833 23.44 14.99 34.53 4.02
612 623 3.703556 ACAGATGATCTCGAATCACTGGT 59.296 43.478 23.44 15.53 34.53 4.00
613 624 4.202090 TGACAGATGATCTCGAATCACTGG 60.202 45.833 23.44 15.18 34.53 4.00
614 625 4.929781 TGACAGATGATCTCGAATCACTG 58.070 43.478 21.21 21.21 35.41 3.66
615 626 5.530712 CATGACAGATGATCTCGAATCACT 58.469 41.667 10.97 8.55 0.00 3.41
616 627 4.150274 GCATGACAGATGATCTCGAATCAC 59.850 45.833 10.97 7.02 0.00 3.06
617 628 4.038883 AGCATGACAGATGATCTCGAATCA 59.961 41.667 0.00 11.09 0.00 2.57
618 629 4.558178 AGCATGACAGATGATCTCGAATC 58.442 43.478 0.00 0.00 0.00 2.52
619 630 4.603989 AGCATGACAGATGATCTCGAAT 57.396 40.909 0.00 0.00 0.00 3.34
620 631 4.397481 AAGCATGACAGATGATCTCGAA 57.603 40.909 0.00 0.00 0.00 3.71
621 632 4.117685 CAAAGCATGACAGATGATCTCGA 58.882 43.478 0.00 0.00 0.00 4.04
622 633 4.117685 TCAAAGCATGACAGATGATCTCG 58.882 43.478 0.00 0.00 31.50 4.04
637 648 9.486497 TGCTAAAATAAAATCAATGTCAAAGCA 57.514 25.926 0.00 0.00 0.00 3.91
654 665 9.562583 GTTCAACAAACCGAATATGCTAAAATA 57.437 29.630 0.00 0.00 31.20 1.40
655 666 8.303876 AGTTCAACAAACCGAATATGCTAAAAT 58.696 29.630 0.00 0.00 38.76 1.82
656 667 7.653647 AGTTCAACAAACCGAATATGCTAAAA 58.346 30.769 0.00 0.00 38.76 1.52
657 668 7.209471 AGTTCAACAAACCGAATATGCTAAA 57.791 32.000 0.00 0.00 38.76 1.85
658 669 6.811253 AGTTCAACAAACCGAATATGCTAA 57.189 33.333 0.00 0.00 38.76 3.09
659 670 7.766738 TCATAGTTCAACAAACCGAATATGCTA 59.233 33.333 0.00 0.00 38.76 3.49
660 671 6.597672 TCATAGTTCAACAAACCGAATATGCT 59.402 34.615 0.00 0.00 38.76 3.79
661 672 6.781138 TCATAGTTCAACAAACCGAATATGC 58.219 36.000 0.00 0.00 38.76 3.14
662 673 9.787532 AAATCATAGTTCAACAAACCGAATATG 57.212 29.630 0.00 0.00 38.76 1.78
663 674 9.787532 CAAATCATAGTTCAACAAACCGAATAT 57.212 29.630 0.00 0.00 38.76 1.28
664 675 8.788806 ACAAATCATAGTTCAACAAACCGAATA 58.211 29.630 0.00 0.00 38.76 1.75
665 676 7.657336 ACAAATCATAGTTCAACAAACCGAAT 58.343 30.769 0.00 0.00 38.76 3.34
666 677 7.033530 ACAAATCATAGTTCAACAAACCGAA 57.966 32.000 0.00 0.00 38.76 4.30
667 678 6.627395 ACAAATCATAGTTCAACAAACCGA 57.373 33.333 0.00 0.00 38.76 4.69
668 679 7.692908 AAACAAATCATAGTTCAACAAACCG 57.307 32.000 0.00 0.00 38.76 4.44
669 680 9.092876 TCAAAACAAATCATAGTTCAACAAACC 57.907 29.630 0.00 0.00 38.76 3.27
672 683 9.868277 AGTTCAAAACAAATCATAGTTCAACAA 57.132 25.926 0.00 0.00 0.00 2.83
673 684 9.868277 AAGTTCAAAACAAATCATAGTTCAACA 57.132 25.926 0.00 0.00 0.00 3.33
686 697 9.265901 TGTCTGAATTCAAAAGTTCAAAACAAA 57.734 25.926 9.88 0.00 34.26 2.83
687 698 8.824159 TGTCTGAATTCAAAAGTTCAAAACAA 57.176 26.923 9.88 0.00 34.26 2.83
688 699 8.824159 TTGTCTGAATTCAAAAGTTCAAAACA 57.176 26.923 9.88 0.00 34.26 2.83
692 703 9.434420 ACAAATTGTCTGAATTCAAAAGTTCAA 57.566 25.926 9.88 8.75 34.26 2.69
711 722 9.303537 TGCACATTGATCATACAATACAAATTG 57.696 29.630 0.00 0.00 46.66 2.32
713 724 9.471084 CATGCACATTGATCATACAATACAAAT 57.529 29.630 0.00 0.00 38.25 2.32
714 725 8.684520 TCATGCACATTGATCATACAATACAAA 58.315 29.630 0.00 0.00 38.25 2.83
715 726 8.223177 TCATGCACATTGATCATACAATACAA 57.777 30.769 0.00 0.00 38.25 2.41
716 727 7.804843 TCATGCACATTGATCATACAATACA 57.195 32.000 0.00 0.00 38.25 2.29
717 728 9.687210 AATTCATGCACATTGATCATACAATAC 57.313 29.630 0.00 0.00 38.25 1.89
718 729 9.685828 CAATTCATGCACATTGATCATACAATA 57.314 29.630 8.73 0.00 38.25 1.90
719 730 8.587952 CAATTCATGCACATTGATCATACAAT 57.412 30.769 8.73 0.00 40.50 2.71
720 731 7.995463 CAATTCATGCACATTGATCATACAA 57.005 32.000 8.73 0.00 32.91 2.41
737 748 7.507956 TCTGATCCTTAAATCCATGCAATTCAT 59.492 33.333 0.00 0.00 35.31 2.57
738 749 6.834969 TCTGATCCTTAAATCCATGCAATTCA 59.165 34.615 0.00 0.00 0.00 2.57
739 750 7.281040 TCTGATCCTTAAATCCATGCAATTC 57.719 36.000 0.00 0.00 0.00 2.17
740 751 7.664552 TTCTGATCCTTAAATCCATGCAATT 57.335 32.000 0.00 0.00 0.00 2.32
741 752 7.850935 ATTCTGATCCTTAAATCCATGCAAT 57.149 32.000 0.00 0.00 0.00 3.56
742 753 7.469043 CGAATTCTGATCCTTAAATCCATGCAA 60.469 37.037 3.52 0.00 0.00 4.08
743 754 6.016860 CGAATTCTGATCCTTAAATCCATGCA 60.017 38.462 3.52 0.00 0.00 3.96
744 755 6.205464 TCGAATTCTGATCCTTAAATCCATGC 59.795 38.462 3.52 0.00 0.00 4.06
745 756 7.734924 TCGAATTCTGATCCTTAAATCCATG 57.265 36.000 3.52 0.00 0.00 3.66
746 757 7.995488 ACTTCGAATTCTGATCCTTAAATCCAT 59.005 33.333 0.00 0.00 0.00 3.41
747 758 7.338710 ACTTCGAATTCTGATCCTTAAATCCA 58.661 34.615 0.00 0.00 0.00 3.41
748 759 7.793927 ACTTCGAATTCTGATCCTTAAATCC 57.206 36.000 0.00 0.00 0.00 3.01
750 761 9.838339 ACATACTTCGAATTCTGATCCTTAAAT 57.162 29.630 0.00 0.00 0.00 1.40
751 762 9.098355 CACATACTTCGAATTCTGATCCTTAAA 57.902 33.333 0.00 0.00 0.00 1.52
752 763 8.474831 TCACATACTTCGAATTCTGATCCTTAA 58.525 33.333 0.00 0.00 0.00 1.85
753 764 8.007405 TCACATACTTCGAATTCTGATCCTTA 57.993 34.615 0.00 0.00 0.00 2.69
754 765 6.878317 TCACATACTTCGAATTCTGATCCTT 58.122 36.000 0.00 0.00 0.00 3.36
755 766 6.471233 TCACATACTTCGAATTCTGATCCT 57.529 37.500 0.00 0.00 0.00 3.24
756 767 7.721286 ATTCACATACTTCGAATTCTGATCC 57.279 36.000 0.00 0.00 0.00 3.36
758 769 9.212641 CCATATTCACATACTTCGAATTCTGAT 57.787 33.333 0.00 0.00 31.94 2.90
759 770 7.657354 CCCATATTCACATACTTCGAATTCTGA 59.343 37.037 0.00 0.00 31.94 3.27
760 771 7.095060 CCCCATATTCACATACTTCGAATTCTG 60.095 40.741 0.00 0.00 31.94 3.02
761 772 6.936900 CCCCATATTCACATACTTCGAATTCT 59.063 38.462 0.00 0.00 31.94 2.40
762 773 6.710744 ACCCCATATTCACATACTTCGAATTC 59.289 38.462 0.00 0.00 31.94 2.17
763 774 6.486657 CACCCCATATTCACATACTTCGAATT 59.513 38.462 0.00 0.00 31.94 2.17
764 775 5.997746 CACCCCATATTCACATACTTCGAAT 59.002 40.000 0.00 0.00 33.98 3.34
765 776 5.364778 CACCCCATATTCACATACTTCGAA 58.635 41.667 0.00 0.00 0.00 3.71
766 777 4.742440 GCACCCCATATTCACATACTTCGA 60.742 45.833 0.00 0.00 0.00 3.71
767 778 3.498397 GCACCCCATATTCACATACTTCG 59.502 47.826 0.00 0.00 0.00 3.79
768 779 4.460263 TGCACCCCATATTCACATACTTC 58.540 43.478 0.00 0.00 0.00 3.01
769 780 4.518278 TGCACCCCATATTCACATACTT 57.482 40.909 0.00 0.00 0.00 2.24
770 781 4.207165 GTTGCACCCCATATTCACATACT 58.793 43.478 0.00 0.00 0.00 2.12
771 782 3.951037 TGTTGCACCCCATATTCACATAC 59.049 43.478 0.00 0.00 0.00 2.39
772 783 3.951037 GTGTTGCACCCCATATTCACATA 59.049 43.478 0.00 0.00 0.00 2.29
773 784 2.760092 GTGTTGCACCCCATATTCACAT 59.240 45.455 0.00 0.00 0.00 3.21
774 785 2.166829 GTGTTGCACCCCATATTCACA 58.833 47.619 0.00 0.00 0.00 3.58
775 786 2.094752 GTGTGTTGCACCCCATATTCAC 60.095 50.000 0.00 0.00 42.10 3.18
776 787 2.166829 GTGTGTTGCACCCCATATTCA 58.833 47.619 0.00 0.00 42.10 2.57
777 788 1.132262 CGTGTGTTGCACCCCATATTC 59.868 52.381 0.00 0.00 44.97 1.75
778 789 1.173043 CGTGTGTTGCACCCCATATT 58.827 50.000 0.00 0.00 44.97 1.28
779 790 0.326595 TCGTGTGTTGCACCCCATAT 59.673 50.000 0.00 0.00 44.97 1.78
780 791 0.321210 CTCGTGTGTTGCACCCCATA 60.321 55.000 0.00 0.00 44.97 2.74
781 792 1.600636 CTCGTGTGTTGCACCCCAT 60.601 57.895 0.00 0.00 44.97 4.00
782 793 2.203139 CTCGTGTGTTGCACCCCA 60.203 61.111 0.00 0.00 44.97 4.96
783 794 2.978010 CCTCGTGTGTTGCACCCC 60.978 66.667 0.00 0.00 44.97 4.95
784 795 2.978010 CCCTCGTGTGTTGCACCC 60.978 66.667 0.00 0.00 44.97 4.61
785 796 2.978010 CCCCTCGTGTGTTGCACC 60.978 66.667 0.00 0.00 44.97 5.01
786 797 2.203153 ACCCCTCGTGTGTTGCAC 60.203 61.111 0.00 0.00 44.36 4.57
787 798 2.110213 GACCCCTCGTGTGTTGCA 59.890 61.111 0.00 0.00 0.00 4.08
788 799 3.041940 CGACCCCTCGTGTGTTGC 61.042 66.667 0.00 0.00 35.00 4.17
789 800 1.663702 GTCGACCCCTCGTGTGTTG 60.664 63.158 3.51 0.00 41.02 3.33
790 801 2.732658 GTCGACCCCTCGTGTGTT 59.267 61.111 3.51 0.00 41.02 3.32
791 802 3.667282 CGTCGACCCCTCGTGTGT 61.667 66.667 10.58 0.00 41.02 3.72
792 803 4.415332 CCGTCGACCCCTCGTGTG 62.415 72.222 10.58 0.00 41.02 3.82
799 810 4.994471 AAAACGCCCGTCGACCCC 62.994 66.667 10.58 0.00 41.67 4.95
800 811 2.974148 AAAAACGCCCGTCGACCC 60.974 61.111 10.58 0.00 41.67 4.46
814 825 5.444983 CGTGTCCGAATGTGTTCATAAAAA 58.555 37.500 0.00 0.00 35.63 1.94
815 826 4.611807 GCGTGTCCGAATGTGTTCATAAAA 60.612 41.667 0.00 0.00 35.63 1.52
816 827 3.120477 GCGTGTCCGAATGTGTTCATAAA 60.120 43.478 0.00 0.00 35.63 1.40
817 828 2.413796 GCGTGTCCGAATGTGTTCATAA 59.586 45.455 0.00 0.00 35.63 1.90
818 829 1.996898 GCGTGTCCGAATGTGTTCATA 59.003 47.619 0.00 0.00 35.63 2.15
819 830 0.796312 GCGTGTCCGAATGTGTTCAT 59.204 50.000 0.00 0.00 35.63 2.57
820 831 1.225376 GGCGTGTCCGAATGTGTTCA 61.225 55.000 0.00 0.00 35.63 3.18
821 832 1.495951 GGCGTGTCCGAATGTGTTC 59.504 57.895 0.00 0.00 35.63 3.18
822 833 1.964373 GGGCGTGTCCGAATGTGTT 60.964 57.895 0.00 0.00 35.63 3.32
823 834 2.358247 GGGCGTGTCCGAATGTGT 60.358 61.111 0.00 0.00 35.63 3.72
824 835 2.358125 TGGGCGTGTCCGAATGTG 60.358 61.111 0.00 0.00 35.63 3.21
825 836 2.358247 GTGGGCGTGTCCGAATGT 60.358 61.111 0.00 0.00 35.63 2.71
826 837 3.487202 CGTGGGCGTGTCCGAATG 61.487 66.667 0.00 0.00 35.63 2.67
827 838 4.752879 CCGTGGGCGTGTCCGAAT 62.753 66.667 0.00 0.00 35.63 3.34
832 843 1.992233 TATACGTCCGTGGGCGTGTC 61.992 60.000 27.26 0.00 41.68 3.67
833 844 1.996786 CTATACGTCCGTGGGCGTGT 61.997 60.000 27.26 22.95 41.68 4.49
834 845 1.298863 CTATACGTCCGTGGGCGTG 60.299 63.158 27.26 8.10 41.68 5.34
835 846 1.442526 CTCTATACGTCCGTGGGCGT 61.443 60.000 23.05 23.05 44.02 5.68
836 847 1.281960 CTCTATACGTCCGTGGGCG 59.718 63.158 11.99 11.99 37.95 6.13
837 848 0.030369 CACTCTATACGTCCGTGGGC 59.970 60.000 1.98 0.00 0.00 5.36
838 849 0.030369 GCACTCTATACGTCCGTGGG 59.970 60.000 1.98 0.00 0.00 4.61
839 850 0.030369 GGCACTCTATACGTCCGTGG 59.970 60.000 1.98 0.00 0.00 4.94
840 851 0.316772 CGGCACTCTATACGTCCGTG 60.317 60.000 1.98 0.00 32.93 4.94
841 852 0.462581 TCGGCACTCTATACGTCCGT 60.463 55.000 7.76 0.00 38.18 4.69
842 853 0.235144 CTCGGCACTCTATACGTCCG 59.765 60.000 0.00 0.00 38.34 4.79
843 854 1.590932 TCTCGGCACTCTATACGTCC 58.409 55.000 0.00 0.00 0.00 4.79
844 855 3.900388 AATCTCGGCACTCTATACGTC 57.100 47.619 0.00 0.00 0.00 4.34
845 856 3.795826 GCAAATCTCGGCACTCTATACGT 60.796 47.826 0.00 0.00 0.00 3.57
846 857 2.726760 GCAAATCTCGGCACTCTATACG 59.273 50.000 0.00 0.00 0.00 3.06
847 858 3.717707 TGCAAATCTCGGCACTCTATAC 58.282 45.455 0.00 0.00 34.58 1.47
848 859 4.141937 ACTTGCAAATCTCGGCACTCTATA 60.142 41.667 0.00 0.00 40.23 1.31
849 860 2.988010 TGCAAATCTCGGCACTCTAT 57.012 45.000 0.00 0.00 34.58 1.98
850 861 2.028112 ACTTGCAAATCTCGGCACTCTA 60.028 45.455 0.00 0.00 40.23 2.43
851 862 1.271054 ACTTGCAAATCTCGGCACTCT 60.271 47.619 0.00 0.00 40.23 3.24
852 863 1.129437 GACTTGCAAATCTCGGCACTC 59.871 52.381 0.00 0.00 40.23 3.51
853 864 1.160137 GACTTGCAAATCTCGGCACT 58.840 50.000 0.00 0.00 40.23 4.40
854 865 0.169009 GGACTTGCAAATCTCGGCAC 59.831 55.000 7.95 0.00 40.23 5.01
855 866 0.250684 TGGACTTGCAAATCTCGGCA 60.251 50.000 7.95 0.00 38.46 5.69
856 867 0.449388 CTGGACTTGCAAATCTCGGC 59.551 55.000 7.95 0.00 0.00 5.54
857 868 1.813513 ACTGGACTTGCAAATCTCGG 58.186 50.000 7.95 5.85 0.00 4.63
858 869 3.070018 AGAACTGGACTTGCAAATCTCG 58.930 45.455 7.95 1.97 0.00 4.04
859 870 5.482908 TCTAGAACTGGACTTGCAAATCTC 58.517 41.667 7.95 0.00 0.00 2.75
860 871 5.489792 TCTAGAACTGGACTTGCAAATCT 57.510 39.130 7.95 2.66 0.00 2.40
861 872 5.448360 GCATCTAGAACTGGACTTGCAAATC 60.448 44.000 0.00 0.00 29.91 2.17
862 873 4.397417 GCATCTAGAACTGGACTTGCAAAT 59.603 41.667 0.00 0.00 29.91 2.32
863 874 3.753272 GCATCTAGAACTGGACTTGCAAA 59.247 43.478 0.00 0.00 29.91 3.68
864 875 3.008375 AGCATCTAGAACTGGACTTGCAA 59.992 43.478 11.97 0.00 31.27 4.08
865 876 2.568956 AGCATCTAGAACTGGACTTGCA 59.431 45.455 11.97 0.00 31.27 4.08
866 877 3.194062 GAGCATCTAGAACTGGACTTGC 58.806 50.000 0.00 0.00 0.00 4.01
881 892 1.068434 GTGACCAGCCTCTAGAGCATC 59.932 57.143 14.73 5.60 0.00 3.91
882 893 1.118838 GTGACCAGCCTCTAGAGCAT 58.881 55.000 14.73 1.56 0.00 3.79
883 894 1.315981 CGTGACCAGCCTCTAGAGCA 61.316 60.000 14.73 2.83 0.00 4.26
884 895 1.435515 CGTGACCAGCCTCTAGAGC 59.564 63.158 14.73 9.86 0.00 4.09
885 896 1.435515 GCGTGACCAGCCTCTAGAG 59.564 63.158 13.18 13.18 0.00 2.43
886 897 3.604629 GCGTGACCAGCCTCTAGA 58.395 61.111 0.00 0.00 0.00 2.43
937 948 2.183555 CTCTGTTCGGCCCCGTAC 59.816 66.667 9.19 9.19 39.55 3.67
938 949 3.766691 GCTCTGTTCGGCCCCGTA 61.767 66.667 6.61 0.00 40.74 4.02
1022 1053 1.422161 CCATGGGATGGGAGTCCTCC 61.422 65.000 9.58 9.07 46.86 4.30
1023 1054 2.149530 CCATGGGATGGGAGTCCTC 58.850 63.158 9.58 0.00 46.86 3.71
1024 1055 4.426521 CCATGGGATGGGAGTCCT 57.573 61.111 9.58 0.00 46.86 3.85
1065 1102 5.001232 TGTTGGTTTCTTGGATGCTACTAC 58.999 41.667 0.00 0.00 0.00 2.73
1066 1103 5.235850 TGTTGGTTTCTTGGATGCTACTA 57.764 39.130 0.00 0.00 0.00 1.82
1067 1104 4.098914 TGTTGGTTTCTTGGATGCTACT 57.901 40.909 0.00 0.00 0.00 2.57
1352 1413 0.742281 CAGAGGAACCACCAGATGCG 60.742 60.000 0.00 0.00 42.04 4.73
1353 1414 1.028868 GCAGAGGAACCACCAGATGC 61.029 60.000 0.00 0.00 42.04 3.91
1354 1415 0.742281 CGCAGAGGAACCACCAGATG 60.742 60.000 0.00 0.00 42.04 2.90
1355 1416 0.904865 TCGCAGAGGAACCACCAGAT 60.905 55.000 0.00 0.00 42.04 2.90
1356 1417 1.533033 TCGCAGAGGAACCACCAGA 60.533 57.895 0.00 0.00 42.04 3.86
1547 1614 1.926511 CTGGTGAATTCCTGCGCCAC 61.927 60.000 4.18 3.18 39.58 5.01
1697 1773 1.376037 CCCGGACAGGCTTCTTGTC 60.376 63.158 0.73 1.08 43.25 3.18
1839 1915 0.179100 CTGGCCGTCGTGATGAAGAT 60.179 55.000 0.00 0.00 0.00 2.40
1968 2138 1.275291 TCCTTGTTTCAGGTAGGCGAG 59.725 52.381 0.00 0.00 35.15 5.03
2013 2218 6.536731 AGCAGATCAATCAATCAATCGTAC 57.463 37.500 0.00 0.00 0.00 3.67
2014 2219 7.661040 TCTAGCAGATCAATCAATCAATCGTA 58.339 34.615 0.00 0.00 0.00 3.43
2015 2220 6.519382 TCTAGCAGATCAATCAATCAATCGT 58.481 36.000 0.00 0.00 0.00 3.73
2016 2221 7.417496 TTCTAGCAGATCAATCAATCAATCG 57.583 36.000 0.00 0.00 0.00 3.34
2019 2224 7.926674 TGTTTCTAGCAGATCAATCAATCAA 57.073 32.000 0.00 0.00 0.00 2.57
2079 2298 4.672409 GCAAACTGCAAGAACCCATATAC 58.328 43.478 0.00 0.00 44.26 1.47
2120 2552 9.669887 CGGAGAGAACTACTACTACCATATATT 57.330 37.037 0.00 0.00 0.00 1.28
2174 3216 2.247311 AAATGTCGAAAGCGCATGAC 57.753 45.000 11.47 12.13 35.52 3.06
2225 3269 1.470098 CAGGAATCTGAAAACTGGGCG 59.530 52.381 0.00 0.00 43.49 6.13
2248 3292 9.883142 AATGTTAAAACTTTCAAGAATCACCAA 57.117 25.926 0.00 0.00 0.00 3.67
2285 3329 6.080648 ACGACACAATCTACACTTGTCTTA 57.919 37.500 0.00 0.00 34.69 2.10
2325 3369 7.633553 GCCATAGCACATGTATACCATAGATGA 60.634 40.741 0.00 0.00 39.53 2.92
2368 3416 4.347360 TGGAGCATCAGACCAGATTATG 57.653 45.455 0.00 0.00 36.25 1.90
2486 3534 7.706607 TGTCCTTGATATCGTCTATTGTTCTTG 59.293 37.037 0.00 0.00 0.00 3.02
2602 3650 9.297586 CATAGTATAAGAGCGTTTTTGACACTA 57.702 33.333 0.00 0.00 0.00 2.74
2603 3651 7.277981 CCATAGTATAAGAGCGTTTTTGACACT 59.722 37.037 0.00 0.00 0.00 3.55
2604 3652 7.399523 CCATAGTATAAGAGCGTTTTTGACAC 58.600 38.462 0.00 0.00 0.00 3.67
2606 3654 6.759827 TCCCATAGTATAAGAGCGTTTTTGAC 59.240 38.462 0.00 0.00 0.00 3.18
2607 3655 6.759827 GTCCCATAGTATAAGAGCGTTTTTGA 59.240 38.462 0.00 0.00 0.00 2.69
2609 3657 5.751990 CGTCCCATAGTATAAGAGCGTTTTT 59.248 40.000 0.00 0.00 0.00 1.94
2610 3658 5.287226 CGTCCCATAGTATAAGAGCGTTTT 58.713 41.667 0.00 0.00 0.00 2.43
2611 3659 4.261909 CCGTCCCATAGTATAAGAGCGTTT 60.262 45.833 0.00 0.00 0.00 3.60
2612 3660 3.255149 CCGTCCCATAGTATAAGAGCGTT 59.745 47.826 0.00 0.00 0.00 4.84
2613 3661 2.818432 CCGTCCCATAGTATAAGAGCGT 59.182 50.000 0.00 0.00 0.00 5.07
2614 3662 3.079578 TCCGTCCCATAGTATAAGAGCG 58.920 50.000 0.00 0.00 0.00 5.03
2615 3663 3.444388 CCTCCGTCCCATAGTATAAGAGC 59.556 52.174 0.00 0.00 0.00 4.09
2616 3664 4.017808 CCCTCCGTCCCATAGTATAAGAG 58.982 52.174 0.00 0.00 0.00 2.85
2617 3665 3.659195 TCCCTCCGTCCCATAGTATAAGA 59.341 47.826 0.00 0.00 0.00 2.10
2618 3666 4.017808 CTCCCTCCGTCCCATAGTATAAG 58.982 52.174 0.00 0.00 0.00 1.73
2619 3667 3.400322 ACTCCCTCCGTCCCATAGTATAA 59.600 47.826 0.00 0.00 0.00 0.98
2622 3670 1.229131 ACTCCCTCCGTCCCATAGTA 58.771 55.000 0.00 0.00 0.00 1.82
2623 3671 1.229131 TACTCCCTCCGTCCCATAGT 58.771 55.000 0.00 0.00 0.00 2.12
2624 3672 2.606751 ATACTCCCTCCGTCCCATAG 57.393 55.000 0.00 0.00 0.00 2.23
2727 3837 3.247411 CGTTGCATGTTGTGTCAACTAGA 59.753 43.478 12.66 0.00 40.01 2.43
2728 3838 3.002246 ACGTTGCATGTTGTGTCAACTAG 59.998 43.478 12.66 7.15 40.01 2.57
2730 3840 1.742831 ACGTTGCATGTTGTGTCAACT 59.257 42.857 12.66 0.00 40.01 3.16
2731 3841 2.187351 ACGTTGCATGTTGTGTCAAC 57.813 45.000 5.78 5.78 39.40 3.18
2732 3842 2.929531 AACGTTGCATGTTGTGTCAA 57.070 40.000 0.00 0.00 0.00 3.18
2733 3843 2.929531 AAACGTTGCATGTTGTGTCA 57.070 40.000 0.00 0.00 0.00 3.58
2734 3844 3.434637 AGAAAACGTTGCATGTTGTGTC 58.565 40.909 0.00 4.83 0.00 3.67
2735 3845 3.434637 GAGAAAACGTTGCATGTTGTGT 58.565 40.909 0.00 0.00 0.00 3.72
2736 3846 2.788786 GGAGAAAACGTTGCATGTTGTG 59.211 45.455 0.00 0.00 0.00 3.33
2737 3847 2.425312 TGGAGAAAACGTTGCATGTTGT 59.575 40.909 0.00 0.52 0.00 3.32
2770 3880 6.595716 AGTTTATCTTGTGATCAGGCACTTAC 59.404 38.462 0.00 0.00 39.49 2.34
2796 7604 6.099701 TGTCAACTAGTCCCTATGCATATGTT 59.900 38.462 6.92 2.18 0.00 2.71
2808 7616 4.219944 TGTCACTACATGTCAACTAGTCCC 59.780 45.833 0.00 0.00 0.00 4.46
2809 7617 5.386958 TGTCACTACATGTCAACTAGTCC 57.613 43.478 0.00 0.00 0.00 3.85
2816 7624 3.737032 TCCGTTGTCACTACATGTCAA 57.263 42.857 0.00 0.00 34.97 3.18
2833 7641 0.935898 GCACTGCTCTTGATCATCCG 59.064 55.000 0.00 0.00 0.00 4.18
2834 7642 2.328819 AGCACTGCTCTTGATCATCC 57.671 50.000 0.00 0.00 30.62 3.51
2835 7643 5.404968 GTGTATAGCACTGCTCTTGATCATC 59.595 44.000 6.86 0.00 44.41 2.92
2836 7644 5.295950 GTGTATAGCACTGCTCTTGATCAT 58.704 41.667 6.86 0.00 44.41 2.45
2837 7645 4.686972 GTGTATAGCACTGCTCTTGATCA 58.313 43.478 6.86 0.00 44.41 2.92
2850 7658 2.287368 CGCCACTATCGTGTGTATAGCA 60.287 50.000 0.00 0.00 39.55 3.49
2851 7659 2.316792 CGCCACTATCGTGTGTATAGC 58.683 52.381 0.00 0.00 39.55 2.97
2852 7660 2.551032 TCCGCCACTATCGTGTGTATAG 59.449 50.000 0.00 0.00 39.55 1.31
2853 7661 2.291465 GTCCGCCACTATCGTGTGTATA 59.709 50.000 0.00 0.00 39.55 1.47
2854 7662 1.066605 GTCCGCCACTATCGTGTGTAT 59.933 52.381 0.00 0.00 39.55 2.29
2855 7663 0.452987 GTCCGCCACTATCGTGTGTA 59.547 55.000 0.00 0.00 39.55 2.90
2856 7664 1.214589 GTCCGCCACTATCGTGTGT 59.785 57.895 0.00 0.00 39.55 3.72
2857 7665 1.872234 CGTCCGCCACTATCGTGTG 60.872 63.158 0.00 0.00 39.55 3.82
2858 7666 1.381928 ATCGTCCGCCACTATCGTGT 61.382 55.000 0.00 0.00 39.55 4.49
2859 7667 0.934901 CATCGTCCGCCACTATCGTG 60.935 60.000 0.00 0.00 40.89 4.35
2860 7668 1.359117 CATCGTCCGCCACTATCGT 59.641 57.895 0.00 0.00 0.00 3.73
2861 7669 0.934901 CACATCGTCCGCCACTATCG 60.935 60.000 0.00 0.00 0.00 2.92
2862 7670 0.102481 ACACATCGTCCGCCACTATC 59.898 55.000 0.00 0.00 0.00 2.08
2863 7671 0.179111 CACACATCGTCCGCCACTAT 60.179 55.000 0.00 0.00 0.00 2.12
2864 7672 1.214325 CACACATCGTCCGCCACTA 59.786 57.895 0.00 0.00 0.00 2.74
2865 7673 2.048222 CACACATCGTCCGCCACT 60.048 61.111 0.00 0.00 0.00 4.00
2866 7674 3.788766 GCACACATCGTCCGCCAC 61.789 66.667 0.00 0.00 0.00 5.01
2867 7675 4.306967 TGCACACATCGTCCGCCA 62.307 61.111 0.00 0.00 0.00 5.69
2868 7676 3.788766 GTGCACACATCGTCCGCC 61.789 66.667 13.17 0.00 0.00 6.13
2869 7677 4.134187 CGTGCACACATCGTCCGC 62.134 66.667 18.64 0.00 0.00 5.54
2870 7678 2.430075 TCGTGCACACATCGTCCG 60.430 61.111 18.64 0.00 0.00 4.79
2871 7679 1.218875 TTGTCGTGCACACATCGTCC 61.219 55.000 18.64 0.00 33.41 4.79
2872 7680 0.790207 ATTGTCGTGCACACATCGTC 59.210 50.000 18.64 0.62 33.41 4.20
2873 7681 0.512518 CATTGTCGTGCACACATCGT 59.487 50.000 18.64 7.05 33.41 3.73
2874 7682 0.790495 GCATTGTCGTGCACACATCG 60.790 55.000 18.64 13.72 44.43 3.84
2875 7683 3.005823 GCATTGTCGTGCACACATC 57.994 52.632 18.64 8.75 44.43 3.06
2882 7690 0.169672 AGCTGATTGCATTGTCGTGC 59.830 50.000 0.00 0.00 45.94 5.34
2883 7691 1.202110 GGAGCTGATTGCATTGTCGTG 60.202 52.381 0.00 0.00 45.94 4.35
2884 7692 1.089920 GGAGCTGATTGCATTGTCGT 58.910 50.000 0.00 0.00 45.94 4.34
2885 7693 0.027194 CGGAGCTGATTGCATTGTCG 59.973 55.000 0.00 0.00 45.94 4.35
2886 7694 1.063174 GACGGAGCTGATTGCATTGTC 59.937 52.381 0.00 0.00 45.94 3.18
2887 7695 1.089920 GACGGAGCTGATTGCATTGT 58.910 50.000 0.00 0.00 45.94 2.71
2888 7696 0.379669 GGACGGAGCTGATTGCATTG 59.620 55.000 0.00 0.00 45.94 2.82
2889 7697 0.035152 TGGACGGAGCTGATTGCATT 60.035 50.000 0.00 0.00 45.94 3.56
2890 7698 0.182061 ATGGACGGAGCTGATTGCAT 59.818 50.000 0.00 0.00 45.94 3.96
2891 7699 0.035152 AATGGACGGAGCTGATTGCA 60.035 50.000 0.00 0.00 45.94 4.08
2892 7700 0.379669 CAATGGACGGAGCTGATTGC 59.620 55.000 0.00 0.00 43.29 3.56
2893 7701 0.379669 GCAATGGACGGAGCTGATTG 59.620 55.000 0.00 0.00 0.00 2.67
2894 7702 0.035152 TGCAATGGACGGAGCTGATT 60.035 50.000 0.00 0.00 0.00 2.57
2895 7703 0.182061 ATGCAATGGACGGAGCTGAT 59.818 50.000 0.00 0.00 0.00 2.90
2896 7704 0.745486 CATGCAATGGACGGAGCTGA 60.745 55.000 0.00 0.00 41.79 4.26
2897 7705 1.725665 CATGCAATGGACGGAGCTG 59.274 57.895 0.00 0.00 41.79 4.24
2898 7706 4.230603 CATGCAATGGACGGAGCT 57.769 55.556 0.00 0.00 41.79 4.09
2909 7717 1.108132 TGTCTGCTGTTGCCATGCAA 61.108 50.000 0.00 0.00 46.80 4.08
2910 7718 1.520600 CTGTCTGCTGTTGCCATGCA 61.521 55.000 0.00 0.00 38.71 3.96
2911 7719 1.211969 CTGTCTGCTGTTGCCATGC 59.788 57.895 0.00 0.00 38.71 4.06
2912 7720 1.211969 GCTGTCTGCTGTTGCCATG 59.788 57.895 0.00 0.00 38.71 3.66
2913 7721 1.228337 TGCTGTCTGCTGTTGCCAT 60.228 52.632 3.20 0.00 43.37 4.40
2914 7722 1.895231 CTGCTGTCTGCTGTTGCCA 60.895 57.895 3.20 0.00 43.37 4.92
2915 7723 2.623915 CCTGCTGTCTGCTGTTGCC 61.624 63.158 3.20 0.00 43.37 4.52
2916 7724 2.952245 CCTGCTGTCTGCTGTTGC 59.048 61.111 3.20 0.00 43.37 4.17
2917 7725 2.623915 GGCCTGCTGTCTGCTGTTG 61.624 63.158 0.00 0.00 43.37 3.33
2918 7726 2.282040 GGCCTGCTGTCTGCTGTT 60.282 61.111 0.00 0.00 43.37 3.16
2919 7727 4.694233 CGGCCTGCTGTCTGCTGT 62.694 66.667 0.00 0.00 43.37 4.40
2936 7744 2.474359 CACTGCACGATAAGCATCTAGC 59.526 50.000 0.00 0.00 41.82 3.42
2937 7745 3.055591 CCACTGCACGATAAGCATCTAG 58.944 50.000 0.00 0.00 41.82 2.43
2938 7746 2.430694 ACCACTGCACGATAAGCATCTA 59.569 45.455 0.00 0.00 41.82 1.98
2939 7747 1.208052 ACCACTGCACGATAAGCATCT 59.792 47.619 0.00 0.00 41.82 2.90
2940 7748 1.594862 GACCACTGCACGATAAGCATC 59.405 52.381 0.00 0.00 41.82 3.91
2941 7749 1.656652 GACCACTGCACGATAAGCAT 58.343 50.000 0.00 0.00 41.82 3.79
2942 7750 0.735978 CGACCACTGCACGATAAGCA 60.736 55.000 0.00 0.00 40.19 3.91
2943 7751 0.736325 ACGACCACTGCACGATAAGC 60.736 55.000 0.24 0.00 0.00 3.09
2944 7752 0.992072 CACGACCACTGCACGATAAG 59.008 55.000 0.24 0.00 0.00 1.73
2945 7753 1.011968 GCACGACCACTGCACGATAA 61.012 55.000 0.24 0.00 34.56 1.75
2946 7754 1.445410 GCACGACCACTGCACGATA 60.445 57.895 0.24 0.00 34.56 2.92
2947 7755 2.738521 GCACGACCACTGCACGAT 60.739 61.111 0.24 0.00 34.56 3.73
2948 7756 4.214327 TGCACGACCACTGCACGA 62.214 61.111 0.24 0.00 39.76 4.35
2951 7759 0.036483 ATATGTGCACGACCACTGCA 60.036 50.000 13.13 3.01 42.42 4.41
2952 7760 1.086696 AATATGTGCACGACCACTGC 58.913 50.000 13.13 0.43 36.68 4.40
2953 7761 2.483877 ACAAATATGTGCACGACCACTG 59.516 45.455 13.13 7.64 38.69 3.66
2954 7762 2.742053 GACAAATATGTGCACGACCACT 59.258 45.455 13.13 0.00 40.74 4.00
2955 7763 2.473868 CGACAAATATGTGCACGACCAC 60.474 50.000 13.13 0.00 40.74 4.16
2956 7764 1.729517 CGACAAATATGTGCACGACCA 59.270 47.619 13.13 0.00 40.74 4.02
2957 7765 1.730064 ACGACAAATATGTGCACGACC 59.270 47.619 13.13 0.00 40.74 4.79
2958 7766 2.666508 AGACGACAAATATGTGCACGAC 59.333 45.455 13.13 11.66 40.74 4.34
2959 7767 2.666022 CAGACGACAAATATGTGCACGA 59.334 45.455 13.13 2.60 40.74 4.35
2960 7768 2.784327 GCAGACGACAAATATGTGCACG 60.784 50.000 13.13 10.27 40.74 5.34
2961 7769 2.774007 GCAGACGACAAATATGTGCAC 58.226 47.619 10.75 10.75 40.74 4.57
2962 7770 1.393196 CGCAGACGACAAATATGTGCA 59.607 47.619 0.00 0.00 43.93 4.57
2963 7771 1.658596 TCGCAGACGACAAATATGTGC 59.341 47.619 0.00 0.00 45.12 4.57
2979 7787 1.741401 CATCCGGAACTGCTTCGCA 60.741 57.895 9.01 0.00 36.92 5.10
2980 7788 0.811616 ATCATCCGGAACTGCTTCGC 60.812 55.000 9.01 0.00 0.00 4.70
2981 7789 1.212616 GATCATCCGGAACTGCTTCG 58.787 55.000 9.01 0.00 0.00 3.79
2982 7790 2.315925 TGATCATCCGGAACTGCTTC 57.684 50.000 9.01 4.65 0.00 3.86
2983 7791 2.787473 TTGATCATCCGGAACTGCTT 57.213 45.000 9.01 0.00 0.00 3.91
2984 7792 2.026822 ACTTTGATCATCCGGAACTGCT 60.027 45.455 9.01 0.00 0.00 4.24
2985 7793 2.352960 GACTTTGATCATCCGGAACTGC 59.647 50.000 9.01 0.00 0.00 4.40
2986 7794 3.866651 AGACTTTGATCATCCGGAACTG 58.133 45.455 9.01 2.70 0.00 3.16
2987 7795 3.772025 AGAGACTTTGATCATCCGGAACT 59.228 43.478 9.01 0.00 0.00 3.01
2988 7796 3.868077 CAGAGACTTTGATCATCCGGAAC 59.132 47.826 9.01 0.89 0.00 3.62
2989 7797 3.679917 GCAGAGACTTTGATCATCCGGAA 60.680 47.826 9.01 0.00 0.00 4.30
2990 7798 2.159043 GCAGAGACTTTGATCATCCGGA 60.159 50.000 6.61 6.61 0.00 5.14
2991 7799 2.208431 GCAGAGACTTTGATCATCCGG 58.792 52.381 0.00 0.00 0.00 5.14
2992 7800 2.897436 TGCAGAGACTTTGATCATCCG 58.103 47.619 0.00 0.00 0.00 4.18
3030 7838 0.387878 CACCTCACACAGAGCGTCTC 60.388 60.000 0.00 0.00 43.31 3.36
3035 7843 1.825281 AGGCTCACCTCACACAGAGC 61.825 60.000 4.79 4.79 46.34 4.09
3047 7855 2.623915 CCTTGTGCTGCAGGCTCAC 61.624 63.158 17.12 15.30 42.95 3.51
3156 7964 1.135660 CAAGTTGAGCAGCAGCAGATG 60.136 52.381 3.17 0.00 45.49 2.90
3204 8012 4.576053 CCATATCGATCCTTTCAACAGCAA 59.424 41.667 0.00 0.00 0.00 3.91


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.