Multiple sequence alignment - TraesCS4A01G211500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G211500 chr4A 100.000 3191 0 0 1 3191 505788086 505791276 0.000000e+00 5893.0
1 TraesCS4A01G211500 chr4D 96.254 2456 57 13 748 3191 80146857 80144425 0.000000e+00 3993.0
2 TraesCS4A01G211500 chr4D 82.600 523 61 14 17 534 80152238 80151741 4.890000e-118 435.0
3 TraesCS4A01G211500 chr4D 86.758 219 23 5 538 755 80147704 80147491 4.110000e-59 239.0
4 TraesCS4A01G211500 chr4B 94.516 2498 93 19 709 3191 112357352 112354884 0.000000e+00 3814.0
5 TraesCS4A01G211500 chr2A 75.904 249 20 22 2806 3048 779202844 779203058 1.220000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G211500 chr4A 505788086 505791276 3190 False 5893 5893 100.000 1 3191 1 chr4A.!!$F1 3190
1 TraesCS4A01G211500 chr4D 80144425 80147704 3279 True 2116 3993 91.506 538 3191 2 chr4D.!!$R2 2653
2 TraesCS4A01G211500 chr4B 112354884 112357352 2468 True 3814 3814 94.516 709 3191 1 chr4B.!!$R1 2482

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
82 83 0.032130 TGCAACTGTCCTCTGTCGAC 59.968 55.0 9.11 9.11 0.0 4.20 F
269 270 0.034756 CAGATGTTGTGACCACCCGA 59.965 55.0 0.00 0.00 0.0 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1995 2645 0.514691 CAAAGCTGAAGACACGGAGC 59.485 55.000 0.0 0.0 0.0 4.70 R
2203 2853 4.634004 TGATTTACAGATAAGGTGTTGCGG 59.366 41.667 0.0 0.0 0.0 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.589908 GGAATGATGAGGGTGTAAGTTGT 58.410 43.478 0.00 0.00 0.00 3.32
23 24 4.396166 GGAATGATGAGGGTGTAAGTTGTG 59.604 45.833 0.00 0.00 0.00 3.33
24 25 3.417069 TGATGAGGGTGTAAGTTGTGG 57.583 47.619 0.00 0.00 0.00 4.17
25 26 2.708861 TGATGAGGGTGTAAGTTGTGGT 59.291 45.455 0.00 0.00 0.00 4.16
26 27 2.631160 TGAGGGTGTAAGTTGTGGTG 57.369 50.000 0.00 0.00 0.00 4.17
27 28 1.841277 TGAGGGTGTAAGTTGTGGTGT 59.159 47.619 0.00 0.00 0.00 4.16
28 29 2.158871 TGAGGGTGTAAGTTGTGGTGTC 60.159 50.000 0.00 0.00 0.00 3.67
29 30 1.202604 AGGGTGTAAGTTGTGGTGTCG 60.203 52.381 0.00 0.00 0.00 4.35
30 31 1.473788 GGGTGTAAGTTGTGGTGTCGT 60.474 52.381 0.00 0.00 0.00 4.34
31 32 1.862827 GGTGTAAGTTGTGGTGTCGTC 59.137 52.381 0.00 0.00 0.00 4.20
32 33 2.542597 GTGTAAGTTGTGGTGTCGTCA 58.457 47.619 0.00 0.00 0.00 4.35
33 34 3.128349 GTGTAAGTTGTGGTGTCGTCAT 58.872 45.455 0.00 0.00 0.00 3.06
34 35 3.183775 GTGTAAGTTGTGGTGTCGTCATC 59.816 47.826 0.00 0.00 0.00 2.92
35 36 1.497991 AAGTTGTGGTGTCGTCATCG 58.502 50.000 0.00 0.00 38.55 3.84
36 37 0.671796 AGTTGTGGTGTCGTCATCGA 59.328 50.000 0.00 0.00 44.12 3.59
48 49 4.210832 TCGTCATCGACAAGTATGCTAG 57.789 45.455 0.00 0.00 41.35 3.42
49 50 2.721603 CGTCATCGACAAGTATGCTAGC 59.278 50.000 8.10 8.10 39.71 3.42
50 51 3.053455 GTCATCGACAAGTATGCTAGCC 58.947 50.000 13.29 0.00 32.09 3.93
51 52 2.035961 TCATCGACAAGTATGCTAGCCC 59.964 50.000 13.29 0.00 0.00 5.19
52 53 0.750850 TCGACAAGTATGCTAGCCCC 59.249 55.000 13.29 0.00 0.00 5.80
53 54 0.464036 CGACAAGTATGCTAGCCCCA 59.536 55.000 13.29 0.00 0.00 4.96
54 55 1.070758 CGACAAGTATGCTAGCCCCAT 59.929 52.381 13.29 1.33 0.00 4.00
55 56 2.498167 GACAAGTATGCTAGCCCCATG 58.502 52.381 13.29 7.60 0.00 3.66
56 57 1.242076 CAAGTATGCTAGCCCCATGC 58.758 55.000 13.29 2.75 41.71 4.06
68 69 2.568090 CCATGCGGGAGTTGCAAC 59.432 61.111 22.17 22.17 46.87 4.17
69 70 1.973281 CCATGCGGGAGTTGCAACT 60.973 57.895 31.57 31.57 46.87 3.16
70 71 1.210931 CATGCGGGAGTTGCAACTG 59.789 57.895 35.67 22.05 46.87 3.16
71 72 1.228245 ATGCGGGAGTTGCAACTGT 60.228 52.632 35.67 14.35 46.87 3.55
72 73 1.237285 ATGCGGGAGTTGCAACTGTC 61.237 55.000 35.67 24.84 46.87 3.51
73 74 2.617274 GCGGGAGTTGCAACTGTCC 61.617 63.158 35.67 30.24 39.88 4.02
74 75 1.071471 CGGGAGTTGCAACTGTCCT 59.929 57.895 35.67 12.70 39.88 3.85
75 76 0.951040 CGGGAGTTGCAACTGTCCTC 60.951 60.000 35.67 20.25 39.88 3.71
76 77 0.398318 GGGAGTTGCAACTGTCCTCT 59.602 55.000 35.67 11.08 39.88 3.69
77 78 1.517242 GGAGTTGCAACTGTCCTCTG 58.483 55.000 35.67 0.00 39.88 3.35
78 79 1.202698 GGAGTTGCAACTGTCCTCTGT 60.203 52.381 35.67 9.47 39.88 3.41
79 80 2.139118 GAGTTGCAACTGTCCTCTGTC 58.861 52.381 35.67 14.71 39.88 3.51
80 81 0.861837 GTTGCAACTGTCCTCTGTCG 59.138 55.000 22.36 0.00 0.00 4.35
81 82 0.750249 TTGCAACTGTCCTCTGTCGA 59.250 50.000 0.00 0.00 0.00 4.20
82 83 0.032130 TGCAACTGTCCTCTGTCGAC 59.968 55.000 9.11 9.11 0.00 4.20
83 84 1.004277 GCAACTGTCCTCTGTCGACG 61.004 60.000 11.62 6.07 32.68 5.12
84 85 1.004277 CAACTGTCCTCTGTCGACGC 61.004 60.000 11.62 0.00 32.68 5.19
85 86 1.173444 AACTGTCCTCTGTCGACGCT 61.173 55.000 11.62 0.00 32.68 5.07
86 87 1.154131 CTGTCCTCTGTCGACGCTG 60.154 63.158 11.62 3.89 32.68 5.18
87 88 2.505118 GTCCTCTGTCGACGCTGC 60.505 66.667 11.62 0.00 0.00 5.25
88 89 2.983592 TCCTCTGTCGACGCTGCA 60.984 61.111 11.62 0.00 0.00 4.41
89 90 2.049156 CCTCTGTCGACGCTGCAA 60.049 61.111 11.62 0.00 0.00 4.08
90 91 2.375766 CCTCTGTCGACGCTGCAAC 61.376 63.158 11.62 0.00 0.00 4.17
91 92 2.355837 TCTGTCGACGCTGCAACC 60.356 61.111 11.62 0.00 0.00 3.77
92 93 2.661537 CTGTCGACGCTGCAACCA 60.662 61.111 11.62 0.00 0.00 3.67
93 94 2.661537 TGTCGACGCTGCAACCAG 60.662 61.111 11.62 0.00 42.13 4.00
94 95 2.661866 GTCGACGCTGCAACCAGT 60.662 61.111 0.00 0.00 41.26 4.00
104 105 2.723746 CAACCAGTGCAGTGTGGC 59.276 61.111 19.93 0.00 37.34 5.01
105 106 2.519302 AACCAGTGCAGTGTGGCC 60.519 61.111 19.93 0.00 37.34 5.36
106 107 4.586235 ACCAGTGCAGTGTGGCCC 62.586 66.667 19.93 0.00 37.34 5.80
107 108 4.275508 CCAGTGCAGTGTGGCCCT 62.276 66.667 19.93 0.00 0.00 5.19
108 109 2.203394 CAGTGCAGTGTGGCCCTT 60.203 61.111 13.67 0.00 0.00 3.95
109 110 2.203394 AGTGCAGTGTGGCCCTTG 60.203 61.111 0.00 0.00 0.00 3.61
110 111 3.297620 GTGCAGTGTGGCCCTTGG 61.298 66.667 0.00 0.00 0.00 3.61
111 112 4.601794 TGCAGTGTGGCCCTTGGG 62.602 66.667 0.00 0.32 0.00 4.12
123 124 4.776322 CTTGGGCCGGCGATGTGA 62.776 66.667 22.54 1.68 0.00 3.58
124 125 4.337177 TTGGGCCGGCGATGTGAA 62.337 61.111 22.54 3.25 0.00 3.18
125 126 3.851897 TTGGGCCGGCGATGTGAAA 62.852 57.895 22.54 3.62 0.00 2.69
126 127 3.059386 GGGCCGGCGATGTGAAAA 61.059 61.111 22.54 0.00 0.00 2.29
127 128 2.485122 GGCCGGCGATGTGAAAAG 59.515 61.111 22.54 0.00 0.00 2.27
128 129 2.332654 GGCCGGCGATGTGAAAAGT 61.333 57.895 22.54 0.00 0.00 2.66
129 130 1.579429 GCCGGCGATGTGAAAAGTT 59.421 52.632 12.58 0.00 0.00 2.66
130 131 0.729140 GCCGGCGATGTGAAAAGTTG 60.729 55.000 12.58 0.00 0.00 3.16
131 132 0.729140 CCGGCGATGTGAAAAGTTGC 60.729 55.000 9.30 0.00 0.00 4.17
132 133 0.040514 CGGCGATGTGAAAAGTTGCA 60.041 50.000 0.00 0.00 0.00 4.08
133 134 1.599171 CGGCGATGTGAAAAGTTGCAA 60.599 47.619 0.00 0.00 0.00 4.08
134 135 1.786579 GGCGATGTGAAAAGTTGCAAC 59.213 47.619 22.17 22.17 0.00 4.17
135 136 2.458951 GCGATGTGAAAAGTTGCAACA 58.541 42.857 30.11 10.03 0.00 3.33
136 137 2.857152 GCGATGTGAAAAGTTGCAACAA 59.143 40.909 30.11 8.41 0.00 2.83
137 138 3.301771 GCGATGTGAAAAGTTGCAACAAC 60.302 43.478 30.11 18.86 0.00 3.32
138 139 3.061928 CGATGTGAAAAGTTGCAACAACG 60.062 43.478 30.11 15.35 0.00 4.10
139 140 2.600731 TGTGAAAAGTTGCAACAACGG 58.399 42.857 30.11 0.00 0.00 4.44
140 141 1.923864 GTGAAAAGTTGCAACAACGGG 59.076 47.619 30.11 0.00 0.00 5.28
141 142 1.819288 TGAAAAGTTGCAACAACGGGA 59.181 42.857 30.11 7.65 0.00 5.14
142 143 2.159310 TGAAAAGTTGCAACAACGGGAG 60.159 45.455 30.11 0.00 0.00 4.30
144 145 2.335316 AAGTTGCAACAACGGGAGTA 57.665 45.000 30.11 0.00 46.69 2.59
145 146 1.878953 AGTTGCAACAACGGGAGTAG 58.121 50.000 30.11 0.00 46.69 2.57
146 147 0.872388 GTTGCAACAACGGGAGTAGG 59.128 55.000 24.52 0.00 46.69 3.18
147 148 0.470766 TTGCAACAACGGGAGTAGGT 59.529 50.000 0.00 0.00 46.69 3.08
148 149 1.340088 TGCAACAACGGGAGTAGGTA 58.660 50.000 0.00 0.00 46.69 3.08
149 150 1.274167 TGCAACAACGGGAGTAGGTAG 59.726 52.381 0.00 0.00 46.69 3.18
150 151 1.274447 GCAACAACGGGAGTAGGTAGT 59.726 52.381 0.00 0.00 46.69 2.73
151 152 2.289257 GCAACAACGGGAGTAGGTAGTT 60.289 50.000 0.00 0.00 46.69 2.24
152 153 3.323243 CAACAACGGGAGTAGGTAGTTG 58.677 50.000 5.25 5.25 46.69 3.16
153 154 2.880443 ACAACGGGAGTAGGTAGTTGA 58.120 47.619 12.67 0.00 46.69 3.18
154 155 3.438183 ACAACGGGAGTAGGTAGTTGAT 58.562 45.455 12.67 0.00 46.69 2.57
155 156 3.194968 ACAACGGGAGTAGGTAGTTGATG 59.805 47.826 12.67 0.00 46.69 3.07
156 157 3.097342 ACGGGAGTAGGTAGTTGATGT 57.903 47.619 0.00 0.00 44.60 3.06
157 158 2.758979 ACGGGAGTAGGTAGTTGATGTG 59.241 50.000 0.00 0.00 44.60 3.21
158 159 2.100916 CGGGAGTAGGTAGTTGATGTGG 59.899 54.545 0.00 0.00 0.00 4.17
159 160 2.434702 GGGAGTAGGTAGTTGATGTGGG 59.565 54.545 0.00 0.00 0.00 4.61
160 161 2.158943 GGAGTAGGTAGTTGATGTGGGC 60.159 54.545 0.00 0.00 0.00 5.36
161 162 1.838077 AGTAGGTAGTTGATGTGGGCC 59.162 52.381 0.00 0.00 0.00 5.80
162 163 1.557832 GTAGGTAGTTGATGTGGGCCA 59.442 52.381 0.00 0.00 0.00 5.36
163 164 0.328258 AGGTAGTTGATGTGGGCCAC 59.672 55.000 29.75 29.75 34.56 5.01
164 165 0.328258 GGTAGTTGATGTGGGCCACT 59.672 55.000 34.69 21.39 35.11 4.00
165 166 1.453155 GTAGTTGATGTGGGCCACTG 58.547 55.000 34.69 0.00 35.11 3.66
166 167 1.003118 GTAGTTGATGTGGGCCACTGA 59.997 52.381 34.69 18.45 35.11 3.41
167 168 0.700564 AGTTGATGTGGGCCACTGAT 59.299 50.000 34.69 22.39 35.11 2.90
168 169 0.813184 GTTGATGTGGGCCACTGATG 59.187 55.000 34.69 0.00 35.11 3.07
169 170 0.405198 TTGATGTGGGCCACTGATGT 59.595 50.000 34.69 16.76 35.11 3.06
170 171 0.405198 TGATGTGGGCCACTGATGTT 59.595 50.000 34.69 14.12 35.11 2.71
171 172 0.813184 GATGTGGGCCACTGATGTTG 59.187 55.000 34.69 0.00 35.11 3.33
172 173 1.252904 ATGTGGGCCACTGATGTTGC 61.253 55.000 34.69 8.14 35.11 4.17
173 174 2.672651 TGGGCCACTGATGTTGCG 60.673 61.111 0.00 0.00 35.90 4.85
174 175 2.672996 GGGCCACTGATGTTGCGT 60.673 61.111 4.39 0.00 35.90 5.24
175 176 1.376683 GGGCCACTGATGTTGCGTA 60.377 57.895 4.39 0.00 35.90 4.42
176 177 0.748005 GGGCCACTGATGTTGCGTAT 60.748 55.000 4.39 0.00 35.90 3.06
177 178 0.657840 GGCCACTGATGTTGCGTATC 59.342 55.000 0.00 0.00 35.90 2.24
178 179 0.301687 GCCACTGATGTTGCGTATCG 59.698 55.000 0.00 0.00 0.00 2.92
179 180 1.640428 CCACTGATGTTGCGTATCGT 58.360 50.000 0.00 0.00 0.00 3.73
180 181 1.999735 CCACTGATGTTGCGTATCGTT 59.000 47.619 0.00 0.00 0.00 3.85
181 182 2.222796 CCACTGATGTTGCGTATCGTTG 60.223 50.000 0.00 0.00 0.00 4.10
182 183 1.999735 ACTGATGTTGCGTATCGTTGG 59.000 47.619 0.00 0.00 0.00 3.77
183 184 2.267426 CTGATGTTGCGTATCGTTGGA 58.733 47.619 0.00 0.00 0.00 3.53
184 185 1.996898 TGATGTTGCGTATCGTTGGAC 59.003 47.619 0.00 0.00 0.00 4.02
185 186 0.996462 ATGTTGCGTATCGTTGGACG 59.004 50.000 0.00 0.00 44.19 4.79
186 187 1.009903 TGTTGCGTATCGTTGGACGG 61.010 55.000 0.27 0.00 42.81 4.79
187 188 0.733566 GTTGCGTATCGTTGGACGGA 60.734 55.000 0.27 0.00 42.81 4.69
188 189 0.038435 TTGCGTATCGTTGGACGGAA 60.038 50.000 0.27 0.00 45.31 4.30
189 190 0.038435 TGCGTATCGTTGGACGGAAA 60.038 50.000 0.27 0.00 42.81 3.13
190 191 1.283736 GCGTATCGTTGGACGGAAAT 58.716 50.000 0.27 0.00 42.81 2.17
191 192 1.005347 GCGTATCGTTGGACGGAAATG 60.005 52.381 0.27 0.00 42.81 2.32
192 193 2.264813 CGTATCGTTGGACGGAAATGT 58.735 47.619 0.27 0.00 42.81 2.71
193 194 2.669434 CGTATCGTTGGACGGAAATGTT 59.331 45.455 0.27 0.00 42.81 2.71
194 195 3.482923 CGTATCGTTGGACGGAAATGTTG 60.483 47.826 0.27 0.00 42.81 3.33
195 196 1.231221 TCGTTGGACGGAAATGTTGG 58.769 50.000 0.27 0.00 42.81 3.77
196 197 0.239879 CGTTGGACGGAAATGTTGGG 59.760 55.000 0.00 0.00 38.08 4.12
197 198 1.611519 GTTGGACGGAAATGTTGGGA 58.388 50.000 0.00 0.00 0.00 4.37
198 199 1.268625 GTTGGACGGAAATGTTGGGAC 59.731 52.381 0.00 0.00 0.00 4.46
199 200 0.250989 TGGACGGAAATGTTGGGACC 60.251 55.000 0.00 0.00 0.00 4.46
201 202 4.390048 CGGAAATGTTGGGACCGT 57.610 55.556 0.00 0.00 38.97 4.83
202 203 2.636299 CGGAAATGTTGGGACCGTT 58.364 52.632 0.00 0.00 38.97 4.44
203 204 0.239879 CGGAAATGTTGGGACCGTTG 59.760 55.000 0.00 0.00 38.97 4.10
204 205 1.611519 GGAAATGTTGGGACCGTTGA 58.388 50.000 0.00 0.00 0.00 3.18
205 206 1.539827 GGAAATGTTGGGACCGTTGAG 59.460 52.381 0.00 0.00 0.00 3.02
206 207 2.500229 GAAATGTTGGGACCGTTGAGA 58.500 47.619 0.00 0.00 0.00 3.27
207 208 2.649531 AATGTTGGGACCGTTGAGAA 57.350 45.000 0.00 0.00 0.00 2.87
208 209 2.649531 ATGTTGGGACCGTTGAGAAA 57.350 45.000 0.00 0.00 0.00 2.52
209 210 2.421751 TGTTGGGACCGTTGAGAAAA 57.578 45.000 0.00 0.00 0.00 2.29
210 211 2.938838 TGTTGGGACCGTTGAGAAAAT 58.061 42.857 0.00 0.00 0.00 1.82
211 212 3.292460 TGTTGGGACCGTTGAGAAAATT 58.708 40.909 0.00 0.00 0.00 1.82
212 213 3.702045 TGTTGGGACCGTTGAGAAAATTT 59.298 39.130 0.00 0.00 0.00 1.82
213 214 4.048504 GTTGGGACCGTTGAGAAAATTTG 58.951 43.478 0.00 0.00 0.00 2.32
214 215 3.292460 TGGGACCGTTGAGAAAATTTGT 58.708 40.909 0.00 0.00 0.00 2.83
215 216 3.702045 TGGGACCGTTGAGAAAATTTGTT 59.298 39.130 0.00 0.00 0.00 2.83
216 217 4.160626 TGGGACCGTTGAGAAAATTTGTTT 59.839 37.500 0.00 0.00 0.00 2.83
217 218 5.360144 TGGGACCGTTGAGAAAATTTGTTTA 59.640 36.000 0.00 0.00 0.00 2.01
218 219 6.127423 TGGGACCGTTGAGAAAATTTGTTTAA 60.127 34.615 0.00 0.00 0.00 1.52
219 220 6.199531 GGGACCGTTGAGAAAATTTGTTTAAC 59.800 38.462 0.00 0.00 0.00 2.01
220 221 6.199531 GGACCGTTGAGAAAATTTGTTTAACC 59.800 38.462 0.00 0.00 0.00 2.85
221 222 5.744819 ACCGTTGAGAAAATTTGTTTAACCG 59.255 36.000 0.00 0.00 0.00 4.44
222 223 5.744819 CCGTTGAGAAAATTTGTTTAACCGT 59.255 36.000 0.00 0.00 0.00 4.83
223 224 6.075257 CCGTTGAGAAAATTTGTTTAACCGTC 60.075 38.462 0.00 0.00 0.00 4.79
224 225 6.469595 CGTTGAGAAAATTTGTTTAACCGTCA 59.530 34.615 0.00 0.00 0.00 4.35
225 226 7.305190 CGTTGAGAAAATTTGTTTAACCGTCAG 60.305 37.037 0.00 0.00 0.00 3.51
226 227 6.500041 TGAGAAAATTTGTTTAACCGTCAGG 58.500 36.000 0.00 0.00 45.13 3.86
227 228 5.286438 AGAAAATTTGTTTAACCGTCAGGC 58.714 37.500 0.00 0.00 42.76 4.85
228 229 4.929819 AAATTTGTTTAACCGTCAGGCT 57.070 36.364 0.00 0.00 42.76 4.58
229 230 3.915437 ATTTGTTTAACCGTCAGGCTG 57.085 42.857 8.58 8.58 42.76 4.85
230 231 2.623878 TTGTTTAACCGTCAGGCTGA 57.376 45.000 14.43 14.43 42.76 4.26
231 232 2.163818 TGTTTAACCGTCAGGCTGAG 57.836 50.000 19.38 9.98 42.76 3.35
232 233 1.414919 TGTTTAACCGTCAGGCTGAGT 59.585 47.619 19.38 10.71 42.76 3.41
233 234 2.158871 TGTTTAACCGTCAGGCTGAGTT 60.159 45.455 19.38 20.56 42.76 3.01
234 235 2.163818 TTAACCGTCAGGCTGAGTTG 57.836 50.000 24.43 16.08 42.76 3.16
235 236 1.045407 TAACCGTCAGGCTGAGTTGT 58.955 50.000 24.43 16.62 42.76 3.32
236 237 0.180406 AACCGTCAGGCTGAGTTGTT 59.820 50.000 19.38 17.43 42.76 2.83
237 238 0.532862 ACCGTCAGGCTGAGTTGTTG 60.533 55.000 19.38 5.46 42.76 3.33
238 239 1.230635 CCGTCAGGCTGAGTTGTTGG 61.231 60.000 19.38 9.21 0.00 3.77
239 240 1.230635 CGTCAGGCTGAGTTGTTGGG 61.231 60.000 19.38 0.00 0.00 4.12
240 241 0.108585 GTCAGGCTGAGTTGTTGGGA 59.891 55.000 19.38 0.00 0.00 4.37
241 242 0.108585 TCAGGCTGAGTTGTTGGGAC 59.891 55.000 14.43 0.00 0.00 4.46
242 243 1.071471 AGGCTGAGTTGTTGGGACG 59.929 57.895 0.00 0.00 0.00 4.79
243 244 1.966451 GGCTGAGTTGTTGGGACGG 60.966 63.158 0.00 0.00 0.00 4.79
244 245 2.617274 GCTGAGTTGTTGGGACGGC 61.617 63.158 0.00 0.00 0.00 5.68
245 246 1.227823 CTGAGTTGTTGGGACGGCA 60.228 57.895 0.00 0.00 0.00 5.69
246 247 1.227823 TGAGTTGTTGGGACGGCAG 60.228 57.895 0.00 0.00 0.00 4.85
247 248 1.966451 GAGTTGTTGGGACGGCAGG 60.966 63.158 0.00 0.00 0.00 4.85
248 249 2.983592 GTTGTTGGGACGGCAGGG 60.984 66.667 0.00 0.00 0.00 4.45
249 250 4.966787 TTGTTGGGACGGCAGGGC 62.967 66.667 0.00 0.00 0.00 5.19
260 261 3.281240 GCAGGGCCAGATGTTGTG 58.719 61.111 6.18 0.00 0.00 3.33
261 262 1.303561 GCAGGGCCAGATGTTGTGA 60.304 57.895 6.18 0.00 0.00 3.58
262 263 1.589716 GCAGGGCCAGATGTTGTGAC 61.590 60.000 6.18 0.00 0.00 3.67
263 264 0.962356 CAGGGCCAGATGTTGTGACC 60.962 60.000 6.18 0.00 0.00 4.02
264 265 1.074775 GGGCCAGATGTTGTGACCA 59.925 57.895 4.39 0.00 0.00 4.02
265 266 1.244019 GGGCCAGATGTTGTGACCAC 61.244 60.000 4.39 0.00 0.00 4.16
266 267 1.244019 GGCCAGATGTTGTGACCACC 61.244 60.000 0.00 0.00 0.00 4.61
267 268 1.244019 GCCAGATGTTGTGACCACCC 61.244 60.000 0.00 0.00 0.00 4.61
268 269 0.955428 CCAGATGTTGTGACCACCCG 60.955 60.000 0.00 0.00 0.00 5.28
269 270 0.034756 CAGATGTTGTGACCACCCGA 59.965 55.000 0.00 0.00 0.00 5.14
270 271 0.034896 AGATGTTGTGACCACCCGAC 59.965 55.000 0.00 0.00 0.00 4.79
271 272 0.250124 GATGTTGTGACCACCCGACA 60.250 55.000 0.00 1.47 0.00 4.35
272 273 0.181587 ATGTTGTGACCACCCGACAA 59.818 50.000 0.00 0.00 0.00 3.18
273 274 0.035343 TGTTGTGACCACCCGACAAA 60.035 50.000 0.00 0.00 31.62 2.83
274 275 0.661020 GTTGTGACCACCCGACAAAG 59.339 55.000 0.00 0.00 31.62 2.77
275 276 0.542333 TTGTGACCACCCGACAAAGA 59.458 50.000 0.00 0.00 0.00 2.52
276 277 0.762418 TGTGACCACCCGACAAAGAT 59.238 50.000 0.00 0.00 0.00 2.40
277 278 1.156736 GTGACCACCCGACAAAGATG 58.843 55.000 0.00 0.00 0.00 2.90
278 279 0.762418 TGACCACCCGACAAAGATGT 59.238 50.000 0.00 0.00 44.25 3.06
279 280 1.142060 TGACCACCCGACAAAGATGTT 59.858 47.619 0.00 0.00 40.74 2.71
280 281 1.535462 GACCACCCGACAAAGATGTTG 59.465 52.381 0.00 0.00 40.74 3.33
286 287 1.890876 CGACAAAGATGTTGGGACCA 58.109 50.000 0.00 0.00 40.74 4.02
287 288 1.535462 CGACAAAGATGTTGGGACCAC 59.465 52.381 0.00 0.00 40.74 4.16
288 289 1.886542 GACAAAGATGTTGGGACCACC 59.113 52.381 0.00 0.00 40.74 4.61
306 307 2.619013 CCAAGAGAAATTGGTGCGAC 57.381 50.000 0.00 0.00 44.01 5.19
307 308 1.200020 CCAAGAGAAATTGGTGCGACC 59.800 52.381 0.00 0.00 44.01 4.79
325 326 2.967599 CCATCAGGTCGAGATGTTGA 57.032 50.000 11.03 0.83 40.93 3.18
326 327 3.251479 CCATCAGGTCGAGATGTTGAA 57.749 47.619 11.03 0.00 40.93 2.69
327 328 3.599343 CCATCAGGTCGAGATGTTGAAA 58.401 45.455 11.03 0.00 40.93 2.69
328 329 3.372206 CCATCAGGTCGAGATGTTGAAAC 59.628 47.826 11.03 0.00 40.93 2.78
329 330 3.040147 TCAGGTCGAGATGTTGAAACC 57.960 47.619 0.00 0.00 0.00 3.27
330 331 1.726791 CAGGTCGAGATGTTGAAACCG 59.273 52.381 0.00 0.00 32.01 4.44
331 332 1.343465 AGGTCGAGATGTTGAAACCGT 59.657 47.619 0.00 0.00 32.01 4.83
332 333 2.559668 AGGTCGAGATGTTGAAACCGTA 59.440 45.455 0.00 0.00 32.01 4.02
333 334 2.921754 GGTCGAGATGTTGAAACCGTAG 59.078 50.000 0.00 0.00 0.00 3.51
346 347 2.509336 CGTAGGGCCGAGCTGTTG 60.509 66.667 0.00 0.00 0.00 3.33
347 348 2.820037 GTAGGGCCGAGCTGTTGC 60.820 66.667 0.00 0.00 40.05 4.17
348 349 4.451150 TAGGGCCGAGCTGTTGCG 62.451 66.667 0.00 0.00 45.42 4.85
354 355 3.767230 CGAGCTGTTGCGACCGTG 61.767 66.667 0.45 0.00 45.42 4.94
355 356 3.414700 GAGCTGTTGCGACCGTGG 61.415 66.667 0.45 0.00 45.42 4.94
356 357 4.988598 AGCTGTTGCGACCGTGGG 62.989 66.667 0.45 0.00 45.42 4.61
359 360 4.634703 TGTTGCGACCGTGGGCAT 62.635 61.111 0.45 0.00 39.21 4.40
360 361 2.435234 GTTGCGACCGTGGGCATA 60.435 61.111 0.00 0.00 39.21 3.14
361 362 2.125310 TTGCGACCGTGGGCATAG 60.125 61.111 0.00 0.00 39.21 2.23
362 363 3.673956 TTGCGACCGTGGGCATAGG 62.674 63.158 0.00 0.00 39.21 2.57
363 364 4.157120 GCGACCGTGGGCATAGGT 62.157 66.667 0.00 0.00 41.63 3.08
366 367 4.066614 ACCGTGGGCATAGGTCAT 57.933 55.556 0.00 0.00 31.69 3.06
367 368 1.526887 ACCGTGGGCATAGGTCATG 59.473 57.895 0.00 0.00 37.73 3.07
368 369 1.271840 ACCGTGGGCATAGGTCATGT 61.272 55.000 0.00 0.00 36.95 3.21
369 370 0.532862 CCGTGGGCATAGGTCATGTC 60.533 60.000 0.00 0.00 38.62 3.06
370 371 0.875908 CGTGGGCATAGGTCATGTCG 60.876 60.000 0.00 0.00 40.39 4.35
371 372 0.532862 GTGGGCATAGGTCATGTCGG 60.533 60.000 0.00 0.00 40.39 4.79
372 373 0.980754 TGGGCATAGGTCATGTCGGT 60.981 55.000 0.00 0.00 40.39 4.69
373 374 0.249911 GGGCATAGGTCATGTCGGTC 60.250 60.000 0.00 0.00 40.39 4.79
374 375 0.464036 GGCATAGGTCATGTCGGTCA 59.536 55.000 0.00 0.00 36.95 4.02
375 376 1.134521 GGCATAGGTCATGTCGGTCAA 60.135 52.381 0.00 0.00 36.95 3.18
376 377 1.933853 GCATAGGTCATGTCGGTCAAC 59.066 52.381 0.00 0.00 36.95 3.18
377 378 2.418746 GCATAGGTCATGTCGGTCAACT 60.419 50.000 0.00 0.00 36.95 3.16
378 379 3.181479 GCATAGGTCATGTCGGTCAACTA 60.181 47.826 0.00 0.00 36.95 2.24
379 380 4.611943 CATAGGTCATGTCGGTCAACTAG 58.388 47.826 0.00 0.00 0.00 2.57
380 381 2.526432 AGGTCATGTCGGTCAACTAGT 58.474 47.619 0.00 0.00 0.00 2.57
381 382 2.231478 AGGTCATGTCGGTCAACTAGTG 59.769 50.000 0.00 0.00 0.00 2.74
382 383 2.607187 GTCATGTCGGTCAACTAGTGG 58.393 52.381 0.00 0.00 0.00 4.00
383 384 1.067142 TCATGTCGGTCAACTAGTGGC 60.067 52.381 0.00 0.00 0.00 5.01
384 385 0.973632 ATGTCGGTCAACTAGTGGCA 59.026 50.000 0.00 0.00 31.37 4.92
385 386 0.317160 TGTCGGTCAACTAGTGGCAG 59.683 55.000 0.00 0.00 31.37 4.85
386 387 1.014564 GTCGGTCAACTAGTGGCAGC 61.015 60.000 0.00 0.00 31.37 5.25
387 388 1.185618 TCGGTCAACTAGTGGCAGCT 61.186 55.000 0.00 0.00 31.37 4.24
388 389 0.530744 CGGTCAACTAGTGGCAGCTA 59.469 55.000 0.00 0.00 31.37 3.32
389 390 1.469940 CGGTCAACTAGTGGCAGCTAG 60.470 57.143 17.15 17.15 42.96 3.42
390 391 1.134670 GGTCAACTAGTGGCAGCTAGG 60.135 57.143 20.56 9.74 41.93 3.02
391 392 0.537188 TCAACTAGTGGCAGCTAGGC 59.463 55.000 20.56 0.00 41.93 3.93
398 399 2.047274 GGCAGCTAGGCGTCACAA 60.047 61.111 0.00 0.00 33.57 3.33
399 400 2.103042 GGCAGCTAGGCGTCACAAG 61.103 63.158 0.00 0.00 33.57 3.16
400 401 1.374758 GCAGCTAGGCGTCACAAGT 60.375 57.895 0.00 0.00 0.00 3.16
401 402 1.630244 GCAGCTAGGCGTCACAAGTG 61.630 60.000 0.00 0.00 0.00 3.16
402 403 1.016130 CAGCTAGGCGTCACAAGTGG 61.016 60.000 0.00 0.00 0.00 4.00
403 404 1.004918 GCTAGGCGTCACAAGTGGT 60.005 57.895 0.00 0.00 0.00 4.16
417 418 5.056894 ACAAGTGGTGACGATTCTAGTAC 57.943 43.478 0.00 0.00 0.00 2.73
418 419 4.082354 ACAAGTGGTGACGATTCTAGTACC 60.082 45.833 0.00 0.00 0.00 3.34
419 420 2.681848 AGTGGTGACGATTCTAGTACCG 59.318 50.000 0.00 0.00 0.00 4.02
420 421 2.019249 TGGTGACGATTCTAGTACCGG 58.981 52.381 0.00 0.00 0.00 5.28
421 422 1.268948 GGTGACGATTCTAGTACCGGC 60.269 57.143 0.00 0.00 0.00 6.13
422 423 0.659427 TGACGATTCTAGTACCGGCG 59.341 55.000 0.00 0.00 31.72 6.46
423 424 0.040603 GACGATTCTAGTACCGGCGG 60.041 60.000 27.06 27.06 0.00 6.13
424 425 1.371389 CGATTCTAGTACCGGCGGC 60.371 63.158 28.71 11.18 0.00 6.53
425 426 1.006454 GATTCTAGTACCGGCGGCC 60.006 63.158 28.71 17.47 0.00 6.13
426 427 1.457079 ATTCTAGTACCGGCGGCCT 60.457 57.895 28.71 23.89 0.00 5.19
427 428 1.047034 ATTCTAGTACCGGCGGCCTT 61.047 55.000 28.71 14.00 0.00 4.35
428 429 1.952102 TTCTAGTACCGGCGGCCTTG 61.952 60.000 28.71 21.69 0.00 3.61
429 430 2.362760 TAGTACCGGCGGCCTTGA 60.363 61.111 28.71 5.15 0.00 3.02
430 431 1.745320 CTAGTACCGGCGGCCTTGAT 61.745 60.000 28.71 7.94 0.00 2.57
431 432 1.332144 TAGTACCGGCGGCCTTGATT 61.332 55.000 28.71 7.08 0.00 2.57
432 433 2.124901 TACCGGCGGCCTTGATTG 60.125 61.111 28.71 0.00 0.00 2.67
435 436 4.183686 CGGCGGCCTTGATTGCTG 62.184 66.667 18.34 0.00 38.16 4.41
436 437 3.830192 GGCGGCCTTGATTGCTGG 61.830 66.667 12.87 0.00 35.60 4.85
437 438 2.751436 GCGGCCTTGATTGCTGGA 60.751 61.111 0.00 0.00 35.60 3.86
438 439 2.342650 GCGGCCTTGATTGCTGGAA 61.343 57.895 0.00 0.00 35.60 3.53
439 440 1.508088 CGGCCTTGATTGCTGGAAC 59.492 57.895 0.00 0.00 0.00 3.62
440 441 1.893062 GGCCTTGATTGCTGGAACC 59.107 57.895 0.00 0.00 0.00 3.62
441 442 1.508088 GCCTTGATTGCTGGAACCG 59.492 57.895 0.00 0.00 0.00 4.44
442 443 1.937546 GCCTTGATTGCTGGAACCGG 61.938 60.000 0.00 0.00 0.00 5.28
450 451 2.742372 CTGGAACCGGCGAAGGTG 60.742 66.667 9.30 0.00 45.21 4.00
451 452 4.323477 TGGAACCGGCGAAGGTGG 62.323 66.667 9.30 0.00 45.21 4.61
452 453 4.011517 GGAACCGGCGAAGGTGGA 62.012 66.667 9.30 0.00 45.21 4.02
453 454 2.434359 GAACCGGCGAAGGTGGAG 60.434 66.667 9.30 0.00 45.21 3.86
454 455 4.699522 AACCGGCGAAGGTGGAGC 62.700 66.667 9.30 0.00 45.21 4.70
458 459 4.704833 GGCGAAGGTGGAGCTGCA 62.705 66.667 2.72 2.72 0.00 4.41
459 460 2.669569 GCGAAGGTGGAGCTGCAA 60.670 61.111 10.44 0.00 0.00 4.08
460 461 2.970974 GCGAAGGTGGAGCTGCAAC 61.971 63.158 16.59 16.59 0.00 4.17
461 462 2.328099 CGAAGGTGGAGCTGCAACC 61.328 63.158 20.79 17.76 0.00 3.77
462 463 2.281761 AAGGTGGAGCTGCAACCG 60.282 61.111 20.79 0.00 39.07 4.44
463 464 3.850098 AAGGTGGAGCTGCAACCGG 62.850 63.158 20.79 0.00 39.07 5.28
473 474 2.501610 GCAACCGGCAAACCCAAA 59.498 55.556 0.00 0.00 43.97 3.28
474 475 1.153349 GCAACCGGCAAACCCAAAA 60.153 52.632 0.00 0.00 43.97 2.44
475 476 0.744771 GCAACCGGCAAACCCAAAAA 60.745 50.000 0.00 0.00 43.97 1.94
493 494 3.481112 AAAAACTACAAATAGCGGCCG 57.519 42.857 24.05 24.05 30.75 6.13
494 495 0.730840 AAACTACAAATAGCGGCCGC 59.269 50.000 42.34 42.34 42.33 6.53
506 507 2.896854 GGCCGCGAGATGATGCAA 60.897 61.111 8.23 0.00 0.00 4.08
507 508 2.256591 GGCCGCGAGATGATGCAAT 61.257 57.895 8.23 0.00 0.00 3.56
508 509 1.206072 GCCGCGAGATGATGCAATC 59.794 57.895 8.23 0.00 45.83 2.67
509 510 1.864862 CCGCGAGATGATGCAATCC 59.135 57.895 8.23 0.00 44.73 3.01
510 511 1.490258 CGCGAGATGATGCAATCCG 59.510 57.895 0.00 0.00 44.73 4.18
511 512 1.864862 GCGAGATGATGCAATCCGG 59.135 57.895 0.00 0.00 44.73 5.14
512 513 1.572085 GCGAGATGATGCAATCCGGG 61.572 60.000 0.00 0.00 44.73 5.73
513 514 0.952497 CGAGATGATGCAATCCGGGG 60.952 60.000 0.00 0.00 44.73 5.73
514 515 0.397941 GAGATGATGCAATCCGGGGA 59.602 55.000 0.00 0.00 44.73 4.81
515 516 0.109342 AGATGATGCAATCCGGGGAC 59.891 55.000 0.00 0.00 44.73 4.46
516 517 0.890996 GATGATGCAATCCGGGGACC 60.891 60.000 0.00 0.00 44.73 4.46
517 518 2.595095 GATGCAATCCGGGGACCA 59.405 61.111 0.00 0.00 43.88 4.02
518 519 1.823899 GATGCAATCCGGGGACCAC 60.824 63.158 0.00 0.00 43.88 4.16
528 529 2.982130 GGGACCACGCTGATCACT 59.018 61.111 0.00 0.00 0.00 3.41
529 530 1.448540 GGGACCACGCTGATCACTG 60.449 63.158 0.00 0.00 0.00 3.66
530 531 1.591703 GGACCACGCTGATCACTGA 59.408 57.895 0.00 0.00 0.00 3.41
531 532 0.176680 GGACCACGCTGATCACTGAT 59.823 55.000 0.00 0.00 0.00 2.90
532 533 1.284657 GACCACGCTGATCACTGATG 58.715 55.000 0.00 0.00 0.00 3.07
533 534 0.742281 ACCACGCTGATCACTGATGC 60.742 55.000 0.00 0.00 0.00 3.91
534 535 0.741927 CCACGCTGATCACTGATGCA 60.742 55.000 0.00 0.00 0.00 3.96
535 536 1.081094 CACGCTGATCACTGATGCAA 58.919 50.000 0.00 0.00 0.00 4.08
536 537 1.465777 CACGCTGATCACTGATGCAAA 59.534 47.619 0.00 0.00 0.00 3.68
543 544 3.822167 TGATCACTGATGCAAACACATGT 59.178 39.130 0.00 0.00 0.00 3.21
549 550 0.604578 ATGCAAACACATGTGGCCTC 59.395 50.000 28.64 15.31 34.19 4.70
573 574 4.253257 GAGCGACGAGTAGGCCGG 62.253 72.222 0.00 0.00 0.00 6.13
625 627 2.498167 CTACAGGGCTAACATCATGGC 58.502 52.381 0.00 0.00 0.00 4.40
645 647 4.175337 GAGGCAGGGGCGTGCATA 62.175 66.667 11.96 0.00 45.93 3.14
651 653 0.179048 CAGGGGCGTGCATAAGATGA 60.179 55.000 0.00 0.00 0.00 2.92
659 661 3.242543 GCGTGCATAAGATGAAAGACAGG 60.243 47.826 0.00 0.00 0.00 4.00
662 664 3.217626 GCATAAGATGAAAGACAGGGGG 58.782 50.000 0.00 0.00 0.00 5.40
663 665 3.117888 GCATAAGATGAAAGACAGGGGGA 60.118 47.826 0.00 0.00 0.00 4.81
671 673 0.793617 AAGACAGGGGGAAGAGAGGA 59.206 55.000 0.00 0.00 0.00 3.71
672 674 0.793617 AGACAGGGGGAAGAGAGGAA 59.206 55.000 0.00 0.00 0.00 3.36
809 1459 0.251341 GCCGCCCAGGGATCATTTAT 60.251 55.000 10.89 0.00 41.48 1.40
810 1460 1.004277 GCCGCCCAGGGATCATTTATA 59.996 52.381 10.89 0.00 41.48 0.98
847 1497 2.735478 TAACGTGCGCTCCCGTTG 60.735 61.111 29.50 10.46 45.86 4.10
962 1612 4.203076 GGATGCCGTACTCCGCGT 62.203 66.667 4.92 0.00 34.38 6.01
970 1620 2.435410 TACTCCGCGTGCTCTCGA 60.435 61.111 4.92 0.00 0.00 4.04
971 1621 1.818363 TACTCCGCGTGCTCTCGAT 60.818 57.895 4.92 0.00 0.00 3.59
972 1622 2.048312 TACTCCGCGTGCTCTCGATG 62.048 60.000 4.92 0.00 0.00 3.84
973 1623 4.193334 TCCGCGTGCTCTCGATGG 62.193 66.667 4.92 1.74 0.00 3.51
978 1628 4.899239 GTGCTCTCGATGGGCGGG 62.899 72.222 2.93 0.00 43.51 6.13
982 1632 4.533124 TCTCGATGGGCGGGGCTA 62.533 66.667 0.00 0.00 42.04 3.93
983 1633 3.996124 CTCGATGGGCGGGGCTAG 61.996 72.222 0.00 0.00 41.33 3.42
1035 1685 2.124695 GGGATCCACTTCGTGCCC 60.125 66.667 15.23 0.00 31.34 5.36
1247 1897 4.796231 CCTCGCGGGTGAGTTCGG 62.796 72.222 4.71 0.00 34.04 4.30
1887 2537 0.249447 TCGAGGTGCATATCGGCAAG 60.249 55.000 19.42 0.00 46.93 4.01
1967 2617 2.180769 CGATGAACTCGCGGTCCA 59.819 61.111 6.13 0.00 41.14 4.02
2048 2698 4.471386 AGCAAATACTGACACTGGGACTAT 59.529 41.667 0.00 0.00 0.00 2.12
2092 2742 0.253160 TGAGGGTGCCAAGGGAGTAT 60.253 55.000 0.00 0.00 0.00 2.12
2358 3015 8.389779 TGCTATTGTTTTTCACTACATCTCAA 57.610 30.769 0.00 0.00 0.00 3.02
2465 3122 5.011840 ACACCTTTGTCCTCCTAAGTTCTAC 59.988 44.000 0.00 0.00 0.00 2.59
2466 3123 5.011738 CACCTTTGTCCTCCTAAGTTCTACA 59.988 44.000 0.00 0.00 0.00 2.74
2467 3124 5.246429 ACCTTTGTCCTCCTAAGTTCTACAG 59.754 44.000 0.00 0.00 0.00 2.74
2468 3125 5.246429 CCTTTGTCCTCCTAAGTTCTACAGT 59.754 44.000 0.00 0.00 0.00 3.55
2469 3126 6.436532 CCTTTGTCCTCCTAAGTTCTACAGTA 59.563 42.308 0.00 0.00 0.00 2.74
2615 3272 0.744414 GAGATAGTTGCTTGGCCGCA 60.744 55.000 0.59 0.59 38.31 5.69
2722 3379 2.815647 GACTGCCTGTACTGCCGC 60.816 66.667 5.66 0.72 0.00 6.53
2825 3482 6.881065 CCAGATTCTGTTAGACAATGGAAGAA 59.119 38.462 12.54 0.00 0.00 2.52
2829 3486 4.451096 TCTGTTAGACAATGGAAGAAACGC 59.549 41.667 0.00 0.00 0.00 4.84
2852 3509 9.209175 ACGCAATTTACCATATTTTTAGCAAAA 57.791 25.926 0.00 0.00 36.30 2.44
2884 3541 1.842562 AGAACATACATGGCAGAGGCT 59.157 47.619 0.00 0.00 40.87 4.58
2899 3556 2.697751 AGAGGCTCTGCGAGTTGATATT 59.302 45.455 17.96 0.00 31.39 1.28
2985 3642 5.982516 GTGATAAGCTTCTGTAGGATGACAG 59.017 44.000 0.00 0.00 46.90 3.51
3013 3670 7.389330 TCGATGCTTGTCTTTACCTGAAATTTA 59.611 33.333 0.00 0.00 0.00 1.40
3123 3780 4.470334 TCATACATAGCACAAGCACAGA 57.530 40.909 0.00 0.00 45.49 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.396166 CACAACTTACACCCTCATCATTCC 59.604 45.833 0.00 0.00 0.00 3.01
1 2 4.396166 CCACAACTTACACCCTCATCATTC 59.604 45.833 0.00 0.00 0.00 2.67
2 3 4.202567 ACCACAACTTACACCCTCATCATT 60.203 41.667 0.00 0.00 0.00 2.57
3 4 3.330701 ACCACAACTTACACCCTCATCAT 59.669 43.478 0.00 0.00 0.00 2.45
4 5 2.708861 ACCACAACTTACACCCTCATCA 59.291 45.455 0.00 0.00 0.00 3.07
5 6 3.074412 CACCACAACTTACACCCTCATC 58.926 50.000 0.00 0.00 0.00 2.92
6 7 2.441750 ACACCACAACTTACACCCTCAT 59.558 45.455 0.00 0.00 0.00 2.90
7 8 1.841277 ACACCACAACTTACACCCTCA 59.159 47.619 0.00 0.00 0.00 3.86
8 9 2.490991 GACACCACAACTTACACCCTC 58.509 52.381 0.00 0.00 0.00 4.30
9 10 1.202604 CGACACCACAACTTACACCCT 60.203 52.381 0.00 0.00 0.00 4.34
10 11 1.223187 CGACACCACAACTTACACCC 58.777 55.000 0.00 0.00 0.00 4.61
11 12 1.862827 GACGACACCACAACTTACACC 59.137 52.381 0.00 0.00 0.00 4.16
12 13 2.542597 TGACGACACCACAACTTACAC 58.457 47.619 0.00 0.00 0.00 2.90
13 14 2.963548 TGACGACACCACAACTTACA 57.036 45.000 0.00 0.00 0.00 2.41
14 15 2.407361 CGATGACGACACCACAACTTAC 59.593 50.000 0.00 0.00 42.66 2.34
15 16 2.293955 TCGATGACGACACCACAACTTA 59.706 45.455 0.00 0.00 43.81 2.24
16 17 1.067974 TCGATGACGACACCACAACTT 59.932 47.619 0.00 0.00 43.81 2.66
17 18 0.671796 TCGATGACGACACCACAACT 59.328 50.000 0.00 0.00 43.81 3.16
18 19 3.188773 TCGATGACGACACCACAAC 57.811 52.632 0.00 0.00 43.81 3.32
27 28 3.548214 GCTAGCATACTTGTCGATGACGA 60.548 47.826 10.63 0.00 46.56 4.20
28 29 2.721603 GCTAGCATACTTGTCGATGACG 59.278 50.000 10.63 0.00 34.95 4.35
29 30 3.053455 GGCTAGCATACTTGTCGATGAC 58.947 50.000 18.24 0.00 0.00 3.06
30 31 2.035961 GGGCTAGCATACTTGTCGATGA 59.964 50.000 18.24 0.00 0.00 2.92
31 32 2.408050 GGGCTAGCATACTTGTCGATG 58.592 52.381 18.24 0.00 0.00 3.84
32 33 1.344763 GGGGCTAGCATACTTGTCGAT 59.655 52.381 18.24 0.00 0.00 3.59
33 34 0.750850 GGGGCTAGCATACTTGTCGA 59.249 55.000 18.24 0.00 0.00 4.20
34 35 0.464036 TGGGGCTAGCATACTTGTCG 59.536 55.000 18.24 0.00 0.00 4.35
35 36 2.498167 CATGGGGCTAGCATACTTGTC 58.502 52.381 18.24 0.00 0.00 3.18
36 37 1.477558 GCATGGGGCTAGCATACTTGT 60.478 52.381 18.24 0.00 40.25 3.16
37 38 1.242076 GCATGGGGCTAGCATACTTG 58.758 55.000 18.24 14.02 40.25 3.16
38 39 0.250467 CGCATGGGGCTAGCATACTT 60.250 55.000 18.24 1.19 41.67 2.24
39 40 1.372683 CGCATGGGGCTAGCATACT 59.627 57.895 18.24 0.00 41.67 2.12
40 41 1.672356 CCGCATGGGGCTAGCATAC 60.672 63.158 16.80 6.32 41.67 2.39
41 42 2.749682 CCGCATGGGGCTAGCATA 59.250 61.111 16.80 1.83 41.67 3.14
51 52 1.973281 AGTTGCAACTCCCGCATGG 60.973 57.895 26.36 0.00 39.58 3.66
52 53 1.210931 CAGTTGCAACTCCCGCATG 59.789 57.895 28.97 13.32 39.58 4.06
53 54 1.228245 ACAGTTGCAACTCCCGCAT 60.228 52.632 28.97 4.11 39.58 4.73
54 55 1.891919 GACAGTTGCAACTCCCGCA 60.892 57.895 28.97 0.00 37.08 5.69
55 56 2.617274 GGACAGTTGCAACTCCCGC 61.617 63.158 28.97 16.97 37.08 6.13
56 57 0.951040 GAGGACAGTTGCAACTCCCG 60.951 60.000 28.97 19.91 37.08 5.14
57 58 0.398318 AGAGGACAGTTGCAACTCCC 59.602 55.000 28.97 28.32 37.08 4.30
58 59 1.202698 ACAGAGGACAGTTGCAACTCC 60.203 52.381 28.97 25.99 37.08 3.85
59 60 2.139118 GACAGAGGACAGTTGCAACTC 58.861 52.381 28.97 18.57 37.08 3.01
60 61 1.539065 CGACAGAGGACAGTTGCAACT 60.539 52.381 26.36 26.36 40.60 3.16
61 62 0.861837 CGACAGAGGACAGTTGCAAC 59.138 55.000 22.17 22.17 0.00 4.17
62 63 0.750249 TCGACAGAGGACAGTTGCAA 59.250 50.000 0.00 0.00 0.00 4.08
63 64 0.032130 GTCGACAGAGGACAGTTGCA 59.968 55.000 11.55 0.00 34.56 4.08
64 65 1.004277 CGTCGACAGAGGACAGTTGC 61.004 60.000 17.16 0.00 34.40 4.17
65 66 1.004277 GCGTCGACAGAGGACAGTTG 61.004 60.000 17.16 0.00 34.40 3.16
66 67 1.173444 AGCGTCGACAGAGGACAGTT 61.173 55.000 17.16 0.00 34.40 3.16
67 68 1.601197 AGCGTCGACAGAGGACAGT 60.601 57.895 17.16 0.00 34.40 3.55
68 69 1.154131 CAGCGTCGACAGAGGACAG 60.154 63.158 17.16 0.00 34.40 3.51
69 70 2.954611 CAGCGTCGACAGAGGACA 59.045 61.111 17.16 0.00 34.40 4.02
70 71 2.505118 GCAGCGTCGACAGAGGAC 60.505 66.667 17.16 0.00 34.40 3.85
71 72 2.561037 TTGCAGCGTCGACAGAGGA 61.561 57.895 17.16 2.13 34.40 3.71
72 73 2.049156 TTGCAGCGTCGACAGAGG 60.049 61.111 17.16 0.00 35.51 3.69
73 74 2.375766 GGTTGCAGCGTCGACAGAG 61.376 63.158 17.16 5.06 0.00 3.35
74 75 2.355837 GGTTGCAGCGTCGACAGA 60.356 61.111 17.16 0.00 0.00 3.41
75 76 2.661537 TGGTTGCAGCGTCGACAG 60.662 61.111 17.16 9.59 0.00 3.51
76 77 2.661537 CTGGTTGCAGCGTCGACA 60.662 61.111 17.16 0.00 0.00 4.35
77 78 2.661866 ACTGGTTGCAGCGTCGAC 60.662 61.111 5.18 5.18 0.00 4.20
78 79 2.661537 CACTGGTTGCAGCGTCGA 60.662 61.111 0.00 0.00 0.00 4.20
87 88 2.723746 GCCACACTGCACTGGTTG 59.276 61.111 0.00 0.00 0.00 3.77
88 89 2.519302 GGCCACACTGCACTGGTT 60.519 61.111 0.00 0.00 0.00 3.67
89 90 4.586235 GGGCCACACTGCACTGGT 62.586 66.667 4.39 0.00 0.00 4.00
90 91 3.797507 AAGGGCCACACTGCACTGG 62.798 63.158 6.18 0.00 46.51 4.00
91 92 2.203394 AAGGGCCACACTGCACTG 60.203 61.111 6.18 0.00 46.51 3.66
93 94 3.297620 CCAAGGGCCACACTGCAC 61.298 66.667 6.18 0.00 33.81 4.57
94 95 4.601794 CCCAAGGGCCACACTGCA 62.602 66.667 6.18 0.00 0.00 4.41
106 107 4.776322 TCACATCGCCGGCCCAAG 62.776 66.667 23.46 11.19 0.00 3.61
107 108 3.851897 TTTCACATCGCCGGCCCAA 62.852 57.895 23.46 7.13 0.00 4.12
108 109 3.851897 TTTTCACATCGCCGGCCCA 62.852 57.895 23.46 8.29 0.00 5.36
109 110 3.051392 CTTTTCACATCGCCGGCCC 62.051 63.158 23.46 0.00 0.00 5.80
110 111 1.862602 AACTTTTCACATCGCCGGCC 61.863 55.000 23.46 2.84 0.00 6.13
111 112 0.729140 CAACTTTTCACATCGCCGGC 60.729 55.000 19.07 19.07 0.00 6.13
112 113 0.729140 GCAACTTTTCACATCGCCGG 60.729 55.000 0.00 0.00 0.00 6.13
113 114 0.040514 TGCAACTTTTCACATCGCCG 60.041 50.000 0.00 0.00 0.00 6.46
114 115 1.786579 GTTGCAACTTTTCACATCGCC 59.213 47.619 22.36 0.00 0.00 5.54
115 116 2.458951 TGTTGCAACTTTTCACATCGC 58.541 42.857 28.61 0.00 0.00 4.58
116 117 3.061928 CGTTGTTGCAACTTTTCACATCG 60.062 43.478 28.61 14.76 0.00 3.84
117 118 3.242712 CCGTTGTTGCAACTTTTCACATC 59.757 43.478 28.61 7.21 0.00 3.06
118 119 3.186119 CCGTTGTTGCAACTTTTCACAT 58.814 40.909 28.61 0.00 0.00 3.21
119 120 2.600731 CCGTTGTTGCAACTTTTCACA 58.399 42.857 28.61 6.06 0.00 3.58
120 121 1.923864 CCCGTTGTTGCAACTTTTCAC 59.076 47.619 28.61 15.97 0.00 3.18
121 122 1.819288 TCCCGTTGTTGCAACTTTTCA 59.181 42.857 28.61 6.87 0.00 2.69
122 123 2.159296 ACTCCCGTTGTTGCAACTTTTC 60.159 45.455 28.61 15.12 0.00 2.29
123 124 1.822371 ACTCCCGTTGTTGCAACTTTT 59.178 42.857 28.61 3.57 0.00 2.27
124 125 1.470051 ACTCCCGTTGTTGCAACTTT 58.530 45.000 28.61 3.05 0.00 2.66
125 126 2.218603 CTACTCCCGTTGTTGCAACTT 58.781 47.619 28.61 6.89 0.00 2.66
126 127 1.542547 CCTACTCCCGTTGTTGCAACT 60.543 52.381 28.61 9.80 0.00 3.16
127 128 0.872388 CCTACTCCCGTTGTTGCAAC 59.128 55.000 22.83 22.83 0.00 4.17
128 129 0.470766 ACCTACTCCCGTTGTTGCAA 59.529 50.000 0.00 0.00 0.00 4.08
129 130 1.274167 CTACCTACTCCCGTTGTTGCA 59.726 52.381 0.00 0.00 0.00 4.08
130 131 1.274447 ACTACCTACTCCCGTTGTTGC 59.726 52.381 0.00 0.00 0.00 4.17
131 132 3.006110 TCAACTACCTACTCCCGTTGTTG 59.994 47.826 7.79 7.79 42.93 3.33
132 133 3.233507 TCAACTACCTACTCCCGTTGTT 58.766 45.455 0.00 0.00 37.02 2.83
133 134 2.880443 TCAACTACCTACTCCCGTTGT 58.120 47.619 0.00 0.00 37.02 3.32
134 135 3.194968 ACATCAACTACCTACTCCCGTTG 59.805 47.826 0.00 0.00 37.03 4.10
135 136 3.194968 CACATCAACTACCTACTCCCGTT 59.805 47.826 0.00 0.00 0.00 4.44
136 137 2.758979 CACATCAACTACCTACTCCCGT 59.241 50.000 0.00 0.00 0.00 5.28
137 138 2.100916 CCACATCAACTACCTACTCCCG 59.899 54.545 0.00 0.00 0.00 5.14
138 139 2.434702 CCCACATCAACTACCTACTCCC 59.565 54.545 0.00 0.00 0.00 4.30
139 140 2.158943 GCCCACATCAACTACCTACTCC 60.159 54.545 0.00 0.00 0.00 3.85
140 141 2.158943 GGCCCACATCAACTACCTACTC 60.159 54.545 0.00 0.00 0.00 2.59
141 142 1.838077 GGCCCACATCAACTACCTACT 59.162 52.381 0.00 0.00 0.00 2.57
142 143 1.557832 TGGCCCACATCAACTACCTAC 59.442 52.381 0.00 0.00 0.00 3.18
143 144 1.557832 GTGGCCCACATCAACTACCTA 59.442 52.381 9.55 0.00 34.08 3.08
144 145 0.328258 GTGGCCCACATCAACTACCT 59.672 55.000 9.55 0.00 34.08 3.08
145 146 0.328258 AGTGGCCCACATCAACTACC 59.672 55.000 17.80 0.00 36.74 3.18
146 147 1.003118 TCAGTGGCCCACATCAACTAC 59.997 52.381 17.80 0.00 36.74 2.73
147 148 1.357137 TCAGTGGCCCACATCAACTA 58.643 50.000 17.80 0.00 36.74 2.24
148 149 0.700564 ATCAGTGGCCCACATCAACT 59.299 50.000 17.80 0.00 36.74 3.16
149 150 0.813184 CATCAGTGGCCCACATCAAC 59.187 55.000 17.80 0.00 36.74 3.18
150 151 0.405198 ACATCAGTGGCCCACATCAA 59.595 50.000 17.80 0.00 36.74 2.57
151 152 0.405198 AACATCAGTGGCCCACATCA 59.595 50.000 17.80 0.00 36.74 3.07
152 153 0.813184 CAACATCAGTGGCCCACATC 59.187 55.000 17.80 0.00 36.74 3.06
153 154 1.252904 GCAACATCAGTGGCCCACAT 61.253 55.000 17.80 0.00 38.85 3.21
154 155 1.902918 GCAACATCAGTGGCCCACA 60.903 57.895 17.80 0.00 38.85 4.17
155 156 2.964978 GCAACATCAGTGGCCCAC 59.035 61.111 5.50 5.50 38.85 4.61
156 157 2.118233 TACGCAACATCAGTGGCCCA 62.118 55.000 0.00 0.00 41.92 5.36
157 158 0.748005 ATACGCAACATCAGTGGCCC 60.748 55.000 0.00 0.00 41.92 5.80
158 159 0.657840 GATACGCAACATCAGTGGCC 59.342 55.000 0.00 0.00 41.92 5.36
159 160 0.301687 CGATACGCAACATCAGTGGC 59.698 55.000 0.00 0.00 41.50 5.01
160 161 1.640428 ACGATACGCAACATCAGTGG 58.360 50.000 0.00 0.00 0.00 4.00
161 162 2.222796 CCAACGATACGCAACATCAGTG 60.223 50.000 0.00 0.00 0.00 3.66
162 163 1.999735 CCAACGATACGCAACATCAGT 59.000 47.619 0.00 0.00 0.00 3.41
163 164 2.029244 GTCCAACGATACGCAACATCAG 59.971 50.000 0.00 0.00 0.00 2.90
164 165 1.996898 GTCCAACGATACGCAACATCA 59.003 47.619 0.00 0.00 0.00 3.07
165 166 1.006391 CGTCCAACGATACGCAACATC 60.006 52.381 0.00 0.00 46.05 3.06
166 167 0.996462 CGTCCAACGATACGCAACAT 59.004 50.000 0.00 0.00 46.05 2.71
167 168 1.009903 CCGTCCAACGATACGCAACA 61.010 55.000 0.24 0.00 46.05 3.33
168 169 0.733566 TCCGTCCAACGATACGCAAC 60.734 55.000 0.24 0.00 46.05 4.17
169 170 0.038435 TTCCGTCCAACGATACGCAA 60.038 50.000 0.24 0.00 46.05 4.85
170 171 0.038435 TTTCCGTCCAACGATACGCA 60.038 50.000 0.24 0.00 46.05 5.24
171 172 1.005347 CATTTCCGTCCAACGATACGC 60.005 52.381 0.24 0.00 46.05 4.42
172 173 2.264813 ACATTTCCGTCCAACGATACG 58.735 47.619 0.24 0.00 46.05 3.06
173 174 3.181514 CCAACATTTCCGTCCAACGATAC 60.182 47.826 0.24 0.00 46.05 2.24
174 175 3.004171 CCAACATTTCCGTCCAACGATA 58.996 45.455 0.24 0.00 46.05 2.92
175 176 1.810151 CCAACATTTCCGTCCAACGAT 59.190 47.619 0.24 0.00 46.05 3.73
176 177 1.231221 CCAACATTTCCGTCCAACGA 58.769 50.000 0.24 0.00 46.05 3.85
177 178 0.239879 CCCAACATTTCCGTCCAACG 59.760 55.000 0.00 0.00 42.11 4.10
178 179 1.268625 GTCCCAACATTTCCGTCCAAC 59.731 52.381 0.00 0.00 0.00 3.77
179 180 1.611519 GTCCCAACATTTCCGTCCAA 58.388 50.000 0.00 0.00 0.00 3.53
180 181 0.250989 GGTCCCAACATTTCCGTCCA 60.251 55.000 0.00 0.00 0.00 4.02
181 182 1.303091 CGGTCCCAACATTTCCGTCC 61.303 60.000 0.00 0.00 36.99 4.79
182 183 2.168054 CGGTCCCAACATTTCCGTC 58.832 57.895 0.00 0.00 36.99 4.79
183 184 4.390048 CGGTCCCAACATTTCCGT 57.610 55.556 0.00 0.00 36.99 4.69
184 185 0.239879 CAACGGTCCCAACATTTCCG 59.760 55.000 0.00 0.00 45.53 4.30
185 186 1.539827 CTCAACGGTCCCAACATTTCC 59.460 52.381 0.00 0.00 0.00 3.13
186 187 2.500229 TCTCAACGGTCCCAACATTTC 58.500 47.619 0.00 0.00 0.00 2.17
187 188 2.649531 TCTCAACGGTCCCAACATTT 57.350 45.000 0.00 0.00 0.00 2.32
188 189 2.649531 TTCTCAACGGTCCCAACATT 57.350 45.000 0.00 0.00 0.00 2.71
189 190 2.649531 TTTCTCAACGGTCCCAACAT 57.350 45.000 0.00 0.00 0.00 2.71
190 191 2.421751 TTTTCTCAACGGTCCCAACA 57.578 45.000 0.00 0.00 0.00 3.33
191 192 4.048504 CAAATTTTCTCAACGGTCCCAAC 58.951 43.478 0.00 0.00 0.00 3.77
192 193 3.702045 ACAAATTTTCTCAACGGTCCCAA 59.298 39.130 0.00 0.00 0.00 4.12
193 194 3.292460 ACAAATTTTCTCAACGGTCCCA 58.708 40.909 0.00 0.00 0.00 4.37
194 195 4.316205 AACAAATTTTCTCAACGGTCCC 57.684 40.909 0.00 0.00 0.00 4.46
195 196 6.199531 GGTTAAACAAATTTTCTCAACGGTCC 59.800 38.462 0.00 0.00 0.00 4.46
196 197 6.075257 CGGTTAAACAAATTTTCTCAACGGTC 60.075 38.462 0.00 0.00 0.00 4.79
197 198 5.744819 CGGTTAAACAAATTTTCTCAACGGT 59.255 36.000 0.00 0.00 0.00 4.83
198 199 5.744819 ACGGTTAAACAAATTTTCTCAACGG 59.255 36.000 0.00 0.00 0.00 4.44
199 200 6.469595 TGACGGTTAAACAAATTTTCTCAACG 59.530 34.615 0.00 0.00 0.00 4.10
200 201 7.043656 CCTGACGGTTAAACAAATTTTCTCAAC 60.044 37.037 0.00 0.00 0.00 3.18
201 202 6.975772 CCTGACGGTTAAACAAATTTTCTCAA 59.024 34.615 0.00 0.00 0.00 3.02
202 203 6.500041 CCTGACGGTTAAACAAATTTTCTCA 58.500 36.000 0.00 0.00 0.00 3.27
203 204 5.401376 GCCTGACGGTTAAACAAATTTTCTC 59.599 40.000 0.00 0.00 0.00 2.87
204 205 5.068591 AGCCTGACGGTTAAACAAATTTTCT 59.931 36.000 0.00 0.00 0.00 2.52
205 206 5.174943 CAGCCTGACGGTTAAACAAATTTTC 59.825 40.000 0.00 0.00 0.00 2.29
206 207 5.047188 CAGCCTGACGGTTAAACAAATTTT 58.953 37.500 0.00 0.00 0.00 1.82
207 208 4.339814 TCAGCCTGACGGTTAAACAAATTT 59.660 37.500 0.00 0.00 0.00 1.82
208 209 3.886505 TCAGCCTGACGGTTAAACAAATT 59.113 39.130 0.00 0.00 0.00 1.82
209 210 3.482436 TCAGCCTGACGGTTAAACAAAT 58.518 40.909 0.00 0.00 0.00 2.32
210 211 2.875933 CTCAGCCTGACGGTTAAACAAA 59.124 45.455 0.00 0.00 0.00 2.83
211 212 2.158871 ACTCAGCCTGACGGTTAAACAA 60.159 45.455 0.00 0.00 0.00 2.83
212 213 1.414919 ACTCAGCCTGACGGTTAAACA 59.585 47.619 0.00 0.00 0.00 2.83
213 214 2.165319 ACTCAGCCTGACGGTTAAAC 57.835 50.000 0.00 0.00 0.00 2.01
214 215 2.158871 ACAACTCAGCCTGACGGTTAAA 60.159 45.455 0.00 0.00 0.00 1.52
215 216 1.414919 ACAACTCAGCCTGACGGTTAA 59.585 47.619 0.00 0.00 0.00 2.01
216 217 1.045407 ACAACTCAGCCTGACGGTTA 58.955 50.000 0.00 0.00 0.00 2.85
217 218 0.180406 AACAACTCAGCCTGACGGTT 59.820 50.000 0.00 0.00 0.00 4.44
218 219 0.532862 CAACAACTCAGCCTGACGGT 60.533 55.000 0.00 0.00 0.00 4.83
219 220 1.230635 CCAACAACTCAGCCTGACGG 61.231 60.000 0.00 0.00 0.00 4.79
220 221 1.230635 CCCAACAACTCAGCCTGACG 61.231 60.000 0.00 0.00 0.00 4.35
221 222 0.108585 TCCCAACAACTCAGCCTGAC 59.891 55.000 0.00 0.00 0.00 3.51
222 223 0.108585 GTCCCAACAACTCAGCCTGA 59.891 55.000 0.00 0.00 0.00 3.86
223 224 1.230635 CGTCCCAACAACTCAGCCTG 61.231 60.000 0.00 0.00 0.00 4.85
224 225 1.071471 CGTCCCAACAACTCAGCCT 59.929 57.895 0.00 0.00 0.00 4.58
225 226 1.966451 CCGTCCCAACAACTCAGCC 60.966 63.158 0.00 0.00 0.00 4.85
226 227 2.617274 GCCGTCCCAACAACTCAGC 61.617 63.158 0.00 0.00 0.00 4.26
227 228 1.227823 TGCCGTCCCAACAACTCAG 60.228 57.895 0.00 0.00 0.00 3.35
228 229 1.227823 CTGCCGTCCCAACAACTCA 60.228 57.895 0.00 0.00 0.00 3.41
229 230 1.966451 CCTGCCGTCCCAACAACTC 60.966 63.158 0.00 0.00 0.00 3.01
230 231 2.113139 CCTGCCGTCCCAACAACT 59.887 61.111 0.00 0.00 0.00 3.16
231 232 2.983592 CCCTGCCGTCCCAACAAC 60.984 66.667 0.00 0.00 0.00 3.32
232 233 4.966787 GCCCTGCCGTCCCAACAA 62.967 66.667 0.00 0.00 0.00 2.83
243 244 1.303561 TCACAACATCTGGCCCTGC 60.304 57.895 0.00 0.00 0.00 4.85
244 245 0.962356 GGTCACAACATCTGGCCCTG 60.962 60.000 0.00 0.00 0.00 4.45
245 246 1.380302 GGTCACAACATCTGGCCCT 59.620 57.895 0.00 0.00 0.00 5.19
246 247 1.074775 TGGTCACAACATCTGGCCC 59.925 57.895 0.00 0.00 0.00 5.80
247 248 1.244019 GGTGGTCACAACATCTGGCC 61.244 60.000 0.00 0.00 33.38 5.36
248 249 1.244019 GGGTGGTCACAACATCTGGC 61.244 60.000 3.40 0.00 35.45 4.85
249 250 0.955428 CGGGTGGTCACAACATCTGG 60.955 60.000 3.40 0.00 35.45 3.86
250 251 0.034756 TCGGGTGGTCACAACATCTG 59.965 55.000 3.40 0.00 35.45 2.90
251 252 0.034896 GTCGGGTGGTCACAACATCT 59.965 55.000 3.40 0.00 35.45 2.90
252 253 0.250124 TGTCGGGTGGTCACAACATC 60.250 55.000 3.40 0.00 35.45 3.06
253 254 0.181587 TTGTCGGGTGGTCACAACAT 59.818 50.000 3.40 0.00 35.45 2.71
254 255 0.035343 TTTGTCGGGTGGTCACAACA 60.035 50.000 3.40 2.05 35.45 3.33
255 256 0.661020 CTTTGTCGGGTGGTCACAAC 59.339 55.000 3.40 0.00 29.74 3.32
256 257 0.542333 TCTTTGTCGGGTGGTCACAA 59.458 50.000 3.40 0.00 0.00 3.33
257 258 0.762418 ATCTTTGTCGGGTGGTCACA 59.238 50.000 3.40 0.00 0.00 3.58
258 259 1.156736 CATCTTTGTCGGGTGGTCAC 58.843 55.000 0.00 0.00 0.00 3.67
259 260 0.762418 ACATCTTTGTCGGGTGGTCA 59.238 50.000 0.00 0.00 0.00 4.02
260 261 1.535462 CAACATCTTTGTCGGGTGGTC 59.465 52.381 0.00 0.00 34.06 4.02
261 262 1.604604 CAACATCTTTGTCGGGTGGT 58.395 50.000 0.00 0.00 34.06 4.16
262 263 0.881118 CCAACATCTTTGTCGGGTGG 59.119 55.000 0.00 0.00 34.06 4.61
263 264 0.881118 CCCAACATCTTTGTCGGGTG 59.119 55.000 0.00 0.00 44.05 4.61
264 265 3.339547 CCCAACATCTTTGTCGGGT 57.660 52.632 0.00 0.00 44.05 5.28
266 267 1.165270 GGTCCCAACATCTTTGTCGG 58.835 55.000 0.00 0.00 34.06 4.79
267 268 1.535462 GTGGTCCCAACATCTTTGTCG 59.465 52.381 0.00 0.00 34.06 4.35
268 269 1.886542 GGTGGTCCCAACATCTTTGTC 59.113 52.381 0.00 0.00 34.06 3.18
269 270 1.216678 TGGTGGTCCCAACATCTTTGT 59.783 47.619 0.00 0.00 41.50 2.83
270 271 1.993956 TGGTGGTCCCAACATCTTTG 58.006 50.000 0.00 0.00 41.50 2.77
279 280 2.490718 CCAATTTCTCTTGGTGGTCCCA 60.491 50.000 0.00 0.00 40.72 4.37
280 281 2.171003 CCAATTTCTCTTGGTGGTCCC 58.829 52.381 0.00 0.00 40.72 4.46
288 289 2.619013 GGTCGCACCAATTTCTCTTG 57.381 50.000 1.01 0.00 38.42 3.02
306 307 2.967599 TCAACATCTCGACCTGATGG 57.032 50.000 15.23 1.97 43.88 3.51
307 308 3.372206 GGTTTCAACATCTCGACCTGATG 59.628 47.826 10.64 10.64 44.79 3.07
308 309 3.600388 GGTTTCAACATCTCGACCTGAT 58.400 45.455 0.00 0.00 0.00 2.90
309 310 2.609491 CGGTTTCAACATCTCGACCTGA 60.609 50.000 0.00 0.00 0.00 3.86
310 311 1.726791 CGGTTTCAACATCTCGACCTG 59.273 52.381 0.00 0.00 0.00 4.00
311 312 1.343465 ACGGTTTCAACATCTCGACCT 59.657 47.619 0.00 0.00 0.00 3.85
312 313 1.792006 ACGGTTTCAACATCTCGACC 58.208 50.000 0.00 0.00 0.00 4.79
313 314 2.921754 CCTACGGTTTCAACATCTCGAC 59.078 50.000 0.00 0.00 0.00 4.20
314 315 2.094390 CCCTACGGTTTCAACATCTCGA 60.094 50.000 0.00 0.00 0.00 4.04
315 316 2.268298 CCCTACGGTTTCAACATCTCG 58.732 52.381 0.00 0.00 0.00 4.04
316 317 2.007608 GCCCTACGGTTTCAACATCTC 58.992 52.381 0.00 0.00 0.00 2.75
317 318 1.339727 GGCCCTACGGTTTCAACATCT 60.340 52.381 0.00 0.00 0.00 2.90
318 319 1.092348 GGCCCTACGGTTTCAACATC 58.908 55.000 0.00 0.00 0.00 3.06
319 320 0.675522 CGGCCCTACGGTTTCAACAT 60.676 55.000 0.00 0.00 0.00 2.71
320 321 1.301874 CGGCCCTACGGTTTCAACA 60.302 57.895 0.00 0.00 0.00 3.33
321 322 1.004679 TCGGCCCTACGGTTTCAAC 60.005 57.895 0.00 0.00 0.00 3.18
322 323 1.294138 CTCGGCCCTACGGTTTCAA 59.706 57.895 0.00 0.00 0.00 2.69
323 324 2.975536 CTCGGCCCTACGGTTTCA 59.024 61.111 0.00 0.00 0.00 2.69
324 325 2.510918 GCTCGGCCCTACGGTTTC 60.511 66.667 0.00 0.00 0.00 2.78
325 326 3.001406 AGCTCGGCCCTACGGTTT 61.001 61.111 0.00 0.00 0.00 3.27
326 327 3.771160 CAGCTCGGCCCTACGGTT 61.771 66.667 0.00 0.00 0.00 4.44
328 329 3.771160 AACAGCTCGGCCCTACGG 61.771 66.667 0.00 0.00 0.00 4.02
329 330 2.509336 CAACAGCTCGGCCCTACG 60.509 66.667 0.00 0.00 0.00 3.51
330 331 2.820037 GCAACAGCTCGGCCCTAC 60.820 66.667 0.00 0.00 0.00 3.18
331 332 4.451150 CGCAACAGCTCGGCCCTA 62.451 66.667 0.00 0.00 0.00 3.53
337 338 3.767230 CACGGTCGCAACAGCTCG 61.767 66.667 0.00 0.00 0.00 5.03
338 339 3.414700 CCACGGTCGCAACAGCTC 61.415 66.667 0.00 0.00 0.00 4.09
339 340 4.988598 CCCACGGTCGCAACAGCT 62.989 66.667 0.00 0.00 0.00 4.24
342 343 3.241515 TATGCCCACGGTCGCAACA 62.242 57.895 3.75 0.00 38.75 3.33
343 344 2.435234 TATGCCCACGGTCGCAAC 60.435 61.111 3.75 0.00 38.75 4.17
344 345 2.125310 CTATGCCCACGGTCGCAA 60.125 61.111 3.75 0.00 38.75 4.85
345 346 4.155733 CCTATGCCCACGGTCGCA 62.156 66.667 2.22 2.22 39.79 5.10
346 347 4.157120 ACCTATGCCCACGGTCGC 62.157 66.667 0.00 0.00 0.00 5.19
347 348 2.106332 GACCTATGCCCACGGTCG 59.894 66.667 0.00 0.00 38.00 4.79
348 349 0.532862 CATGACCTATGCCCACGGTC 60.533 60.000 10.15 10.15 45.76 4.79
349 350 1.271840 ACATGACCTATGCCCACGGT 61.272 55.000 0.00 0.00 40.59 4.83
350 351 0.532862 GACATGACCTATGCCCACGG 60.533 60.000 0.00 0.00 40.59 4.94
351 352 0.875908 CGACATGACCTATGCCCACG 60.876 60.000 0.00 0.00 40.59 4.94
352 353 0.532862 CCGACATGACCTATGCCCAC 60.533 60.000 0.00 0.00 40.59 4.61
353 354 0.980754 ACCGACATGACCTATGCCCA 60.981 55.000 0.00 0.00 40.59 5.36
354 355 0.249911 GACCGACATGACCTATGCCC 60.250 60.000 0.00 0.00 40.59 5.36
355 356 0.464036 TGACCGACATGACCTATGCC 59.536 55.000 0.00 0.00 40.59 4.40
356 357 1.933853 GTTGACCGACATGACCTATGC 59.066 52.381 0.00 0.00 40.59 3.14
357 358 3.526931 AGTTGACCGACATGACCTATG 57.473 47.619 0.00 0.00 42.68 2.23
358 359 4.098044 CACTAGTTGACCGACATGACCTAT 59.902 45.833 0.00 0.00 0.00 2.57
359 360 3.442625 CACTAGTTGACCGACATGACCTA 59.557 47.826 0.00 0.00 0.00 3.08
360 361 2.231478 CACTAGTTGACCGACATGACCT 59.769 50.000 0.00 0.00 0.00 3.85
361 362 2.607187 CACTAGTTGACCGACATGACC 58.393 52.381 0.00 0.00 0.00 4.02
362 363 2.607187 CCACTAGTTGACCGACATGAC 58.393 52.381 0.00 0.00 0.00 3.06
363 364 1.067142 GCCACTAGTTGACCGACATGA 60.067 52.381 0.00 0.00 0.00 3.07
364 365 1.337728 TGCCACTAGTTGACCGACATG 60.338 52.381 0.00 0.00 0.00 3.21
365 366 0.973632 TGCCACTAGTTGACCGACAT 59.026 50.000 0.00 0.00 0.00 3.06
366 367 0.317160 CTGCCACTAGTTGACCGACA 59.683 55.000 0.00 0.00 0.00 4.35
367 368 1.014564 GCTGCCACTAGTTGACCGAC 61.015 60.000 0.00 0.00 0.00 4.79
368 369 1.185618 AGCTGCCACTAGTTGACCGA 61.186 55.000 0.00 0.00 0.00 4.69
369 370 0.530744 TAGCTGCCACTAGTTGACCG 59.469 55.000 0.00 0.00 0.00 4.79
370 371 1.134670 CCTAGCTGCCACTAGTTGACC 60.135 57.143 0.00 0.00 38.39 4.02
371 372 1.740718 GCCTAGCTGCCACTAGTTGAC 60.741 57.143 0.00 0.00 38.39 3.18
372 373 0.537188 GCCTAGCTGCCACTAGTTGA 59.463 55.000 0.00 0.00 38.39 3.18
373 374 0.807667 CGCCTAGCTGCCACTAGTTG 60.808 60.000 0.00 0.00 38.39 3.16
374 375 1.258445 ACGCCTAGCTGCCACTAGTT 61.258 55.000 0.00 0.00 38.39 2.24
375 376 1.668101 GACGCCTAGCTGCCACTAGT 61.668 60.000 0.00 0.00 38.39 2.57
376 377 1.066587 GACGCCTAGCTGCCACTAG 59.933 63.158 0.00 3.65 39.54 2.57
377 378 1.680989 TGACGCCTAGCTGCCACTA 60.681 57.895 0.00 0.00 0.00 2.74
378 379 2.997315 TGACGCCTAGCTGCCACT 60.997 61.111 0.00 0.00 0.00 4.00
379 380 2.815647 GTGACGCCTAGCTGCCAC 60.816 66.667 0.00 0.00 0.00 5.01
380 381 2.786539 CTTGTGACGCCTAGCTGCCA 62.787 60.000 0.00 0.00 0.00 4.92
381 382 2.047274 TTGTGACGCCTAGCTGCC 60.047 61.111 0.00 0.00 0.00 4.85
382 383 1.374758 ACTTGTGACGCCTAGCTGC 60.375 57.895 0.00 0.00 0.00 5.25
383 384 1.016130 CCACTTGTGACGCCTAGCTG 61.016 60.000 0.00 0.00 0.00 4.24
384 385 1.293498 CCACTTGTGACGCCTAGCT 59.707 57.895 1.89 0.00 0.00 3.32
385 386 1.004918 ACCACTTGTGACGCCTAGC 60.005 57.895 1.89 0.00 0.00 3.42
394 395 3.914312 ACTAGAATCGTCACCACTTGTG 58.086 45.455 0.00 0.00 46.88 3.33
395 396 4.082354 GGTACTAGAATCGTCACCACTTGT 60.082 45.833 0.00 0.00 0.00 3.16
396 397 4.421948 GGTACTAGAATCGTCACCACTTG 58.578 47.826 0.00 0.00 0.00 3.16
397 398 3.128242 CGGTACTAGAATCGTCACCACTT 59.872 47.826 0.00 0.00 0.00 3.16
398 399 2.681848 CGGTACTAGAATCGTCACCACT 59.318 50.000 0.00 0.00 0.00 4.00
399 400 2.223433 CCGGTACTAGAATCGTCACCAC 60.223 54.545 0.00 0.00 0.00 4.16
400 401 2.019249 CCGGTACTAGAATCGTCACCA 58.981 52.381 0.00 0.00 0.00 4.17
401 402 1.268948 GCCGGTACTAGAATCGTCACC 60.269 57.143 1.90 0.00 0.00 4.02
402 403 1.596464 CGCCGGTACTAGAATCGTCAC 60.596 57.143 1.90 0.00 0.00 3.67
403 404 0.659427 CGCCGGTACTAGAATCGTCA 59.341 55.000 1.90 0.00 0.00 4.35
404 405 0.040603 CCGCCGGTACTAGAATCGTC 60.041 60.000 1.90 0.00 0.00 4.20
405 406 2.028130 CCGCCGGTACTAGAATCGT 58.972 57.895 1.90 0.00 0.00 3.73
406 407 1.371389 GCCGCCGGTACTAGAATCG 60.371 63.158 4.45 0.00 0.00 3.34
407 408 1.006454 GGCCGCCGGTACTAGAATC 60.006 63.158 4.45 0.00 0.00 2.52
408 409 1.047034 AAGGCCGCCGGTACTAGAAT 61.047 55.000 4.45 0.00 0.00 2.40
409 410 1.683365 AAGGCCGCCGGTACTAGAA 60.683 57.895 4.45 0.00 0.00 2.10
410 411 2.043652 AAGGCCGCCGGTACTAGA 60.044 61.111 4.45 0.00 0.00 2.43
411 412 1.745320 ATCAAGGCCGCCGGTACTAG 61.745 60.000 4.45 0.00 0.00 2.57
412 413 1.332144 AATCAAGGCCGCCGGTACTA 61.332 55.000 4.45 0.00 0.00 1.82
413 414 2.666098 AATCAAGGCCGCCGGTACT 61.666 57.895 4.45 0.00 0.00 2.73
414 415 2.124860 AATCAAGGCCGCCGGTAC 60.125 61.111 4.45 0.00 0.00 3.34
415 416 2.124901 CAATCAAGGCCGCCGGTA 60.125 61.111 4.45 0.00 0.00 4.02
418 419 4.183686 CAGCAATCAAGGCCGCCG 62.184 66.667 3.05 0.00 0.00 6.46
419 420 3.830192 CCAGCAATCAAGGCCGCC 61.830 66.667 0.00 0.00 0.00 6.13
420 421 2.342650 TTCCAGCAATCAAGGCCGC 61.343 57.895 0.00 0.00 0.00 6.53
421 422 1.508088 GTTCCAGCAATCAAGGCCG 59.492 57.895 0.00 0.00 0.00 6.13
422 423 1.893062 GGTTCCAGCAATCAAGGCC 59.107 57.895 0.00 0.00 0.00 5.19
423 424 1.508088 CGGTTCCAGCAATCAAGGC 59.492 57.895 0.00 0.00 0.00 4.35
424 425 1.937546 GCCGGTTCCAGCAATCAAGG 61.938 60.000 1.90 0.00 0.00 3.61
425 426 1.508088 GCCGGTTCCAGCAATCAAG 59.492 57.895 1.90 0.00 0.00 3.02
426 427 2.331893 CGCCGGTTCCAGCAATCAA 61.332 57.895 1.90 0.00 0.00 2.57
427 428 2.739849 TTCGCCGGTTCCAGCAATCA 62.740 55.000 1.90 0.00 0.00 2.57
428 429 1.982073 CTTCGCCGGTTCCAGCAATC 61.982 60.000 1.90 0.00 0.00 2.67
429 430 2.033448 TTCGCCGGTTCCAGCAAT 59.967 55.556 1.90 0.00 0.00 3.56
430 431 2.668212 CTTCGCCGGTTCCAGCAA 60.668 61.111 1.90 0.00 0.00 3.91
431 432 4.697756 CCTTCGCCGGTTCCAGCA 62.698 66.667 1.90 0.00 0.00 4.41
432 433 4.699522 ACCTTCGCCGGTTCCAGC 62.700 66.667 1.90 0.00 31.94 4.85
433 434 2.742372 CACCTTCGCCGGTTCCAG 60.742 66.667 1.90 0.00 34.29 3.86
434 435 4.323477 CCACCTTCGCCGGTTCCA 62.323 66.667 1.90 0.00 34.29 3.53
435 436 3.952628 CTCCACCTTCGCCGGTTCC 62.953 68.421 1.90 0.00 34.29 3.62
436 437 2.434359 CTCCACCTTCGCCGGTTC 60.434 66.667 1.90 0.00 34.29 3.62
437 438 4.699522 GCTCCACCTTCGCCGGTT 62.700 66.667 1.90 0.00 34.29 4.44
441 442 4.704833 TGCAGCTCCACCTTCGCC 62.705 66.667 0.00 0.00 0.00 5.54
442 443 2.669569 TTGCAGCTCCACCTTCGC 60.670 61.111 0.00 0.00 0.00 4.70
443 444 2.328099 GGTTGCAGCTCCACCTTCG 61.328 63.158 0.00 0.00 0.00 3.79
444 445 2.328099 CGGTTGCAGCTCCACCTTC 61.328 63.158 0.00 0.00 0.00 3.46
445 446 2.281761 CGGTTGCAGCTCCACCTT 60.282 61.111 0.00 0.00 0.00 3.50
446 447 4.335647 CCGGTTGCAGCTCCACCT 62.336 66.667 0.00 0.00 0.00 4.00
456 457 0.744771 TTTTTGGGTTTGCCGGTTGC 60.745 50.000 1.90 0.00 41.77 4.17
457 458 3.460648 TTTTTGGGTTTGCCGGTTG 57.539 47.368 1.90 0.00 34.97 3.77
473 474 2.414957 GCGGCCGCTATTTGTAGTTTTT 60.415 45.455 41.71 0.00 38.26 1.94
474 475 1.131693 GCGGCCGCTATTTGTAGTTTT 59.868 47.619 41.71 0.00 38.26 2.43
475 476 0.730840 GCGGCCGCTATTTGTAGTTT 59.269 50.000 41.71 0.00 38.26 2.66
476 477 1.426041 CGCGGCCGCTATTTGTAGTT 61.426 55.000 43.60 0.00 39.32 2.24
477 478 1.881252 CGCGGCCGCTATTTGTAGT 60.881 57.895 43.60 0.00 39.32 2.73
478 479 1.548973 CTCGCGGCCGCTATTTGTAG 61.549 60.000 43.60 27.28 39.32 2.74
479 480 1.590525 CTCGCGGCCGCTATTTGTA 60.591 57.895 43.60 20.45 39.32 2.41
480 481 2.644555 ATCTCGCGGCCGCTATTTGT 62.645 55.000 43.60 23.57 39.32 2.83
481 482 1.956170 ATCTCGCGGCCGCTATTTG 60.956 57.895 43.60 29.48 39.32 2.32
482 483 1.956170 CATCTCGCGGCCGCTATTT 60.956 57.895 43.60 25.18 39.32 1.40
483 484 2.159819 ATCATCTCGCGGCCGCTATT 62.160 55.000 43.60 24.81 39.32 1.73
484 485 2.640302 ATCATCTCGCGGCCGCTAT 61.640 57.895 43.60 30.95 39.32 2.97
485 486 3.295273 ATCATCTCGCGGCCGCTA 61.295 61.111 43.60 34.38 39.32 4.26
486 487 4.957684 CATCATCTCGCGGCCGCT 62.958 66.667 43.60 26.01 39.32 5.52
489 490 2.180131 GATTGCATCATCTCGCGGCC 62.180 60.000 6.13 0.00 0.00 6.13
490 491 1.206072 GATTGCATCATCTCGCGGC 59.794 57.895 6.13 0.00 0.00 6.53
491 492 1.864862 GGATTGCATCATCTCGCGG 59.135 57.895 6.13 0.00 0.00 6.46
492 493 1.490258 CGGATTGCATCATCTCGCG 59.510 57.895 0.00 0.00 0.00 5.87
493 494 1.572085 CCCGGATTGCATCATCTCGC 61.572 60.000 0.73 0.00 0.00 5.03
494 495 0.952497 CCCCGGATTGCATCATCTCG 60.952 60.000 0.73 0.00 0.00 4.04
495 496 0.397941 TCCCCGGATTGCATCATCTC 59.602 55.000 0.73 0.00 0.00 2.75
496 497 0.109342 GTCCCCGGATTGCATCATCT 59.891 55.000 0.73 0.00 0.00 2.90
497 498 0.890996 GGTCCCCGGATTGCATCATC 60.891 60.000 0.73 0.00 0.00 2.92
498 499 1.151450 GGTCCCCGGATTGCATCAT 59.849 57.895 0.73 0.00 0.00 2.45
499 500 2.304831 TGGTCCCCGGATTGCATCA 61.305 57.895 0.73 0.00 0.00 3.07
500 501 1.823899 GTGGTCCCCGGATTGCATC 60.824 63.158 0.73 0.00 0.00 3.91
501 502 2.275418 GTGGTCCCCGGATTGCAT 59.725 61.111 0.73 0.00 0.00 3.96
502 503 4.402528 CGTGGTCCCCGGATTGCA 62.403 66.667 0.73 0.00 0.00 4.08
504 505 4.096003 AGCGTGGTCCCCGGATTG 62.096 66.667 0.73 0.00 0.00 2.67
505 506 4.096003 CAGCGTGGTCCCCGGATT 62.096 66.667 0.73 0.00 0.00 3.01
508 509 4.530857 GATCAGCGTGGTCCCCGG 62.531 72.222 0.00 0.00 0.00 5.73
509 510 3.770040 TGATCAGCGTGGTCCCCG 61.770 66.667 0.00 0.00 0.00 5.73
510 511 2.125106 GTGATCAGCGTGGTCCCC 60.125 66.667 0.00 0.00 0.00 4.81
511 512 1.448540 CAGTGATCAGCGTGGTCCC 60.449 63.158 0.00 0.00 0.00 4.46
512 513 0.176680 ATCAGTGATCAGCGTGGTCC 59.823 55.000 0.00 0.00 0.00 4.46
513 514 1.284657 CATCAGTGATCAGCGTGGTC 58.715 55.000 1.56 0.00 0.00 4.02
514 515 0.742281 GCATCAGTGATCAGCGTGGT 60.742 55.000 1.56 0.00 0.00 4.16
515 516 0.741927 TGCATCAGTGATCAGCGTGG 60.742 55.000 1.56 0.00 0.00 4.94
516 517 1.081094 TTGCATCAGTGATCAGCGTG 58.919 50.000 1.56 0.00 0.00 5.34
517 518 1.466167 GTTTGCATCAGTGATCAGCGT 59.534 47.619 1.56 0.00 0.00 5.07
518 519 1.465777 TGTTTGCATCAGTGATCAGCG 59.534 47.619 1.56 0.00 0.00 5.18
519 520 2.227149 TGTGTTTGCATCAGTGATCAGC 59.773 45.455 1.56 5.56 0.00 4.26
520 521 4.082949 ACATGTGTTTGCATCAGTGATCAG 60.083 41.667 1.56 0.00 0.00 2.90
521 522 3.822167 ACATGTGTTTGCATCAGTGATCA 59.178 39.130 1.56 2.04 0.00 2.92
522 523 4.163552 CACATGTGTTTGCATCAGTGATC 58.836 43.478 18.03 0.00 0.00 2.92
523 524 3.057104 CCACATGTGTTTGCATCAGTGAT 60.057 43.478 23.79 0.00 0.00 3.06
524 525 2.293955 CCACATGTGTTTGCATCAGTGA 59.706 45.455 23.79 0.00 0.00 3.41
525 526 2.668250 CCACATGTGTTTGCATCAGTG 58.332 47.619 23.79 0.69 0.00 3.66
526 527 1.000060 GCCACATGTGTTTGCATCAGT 60.000 47.619 23.79 0.00 0.00 3.41
527 528 1.670674 GGCCACATGTGTTTGCATCAG 60.671 52.381 23.79 6.82 0.00 2.90
528 529 0.317799 GGCCACATGTGTTTGCATCA 59.682 50.000 23.79 0.00 0.00 3.07
529 530 0.604578 AGGCCACATGTGTTTGCATC 59.395 50.000 23.79 8.93 0.00 3.91
530 531 0.604578 GAGGCCACATGTGTTTGCAT 59.395 50.000 23.79 17.48 0.00 3.96
531 532 0.467844 AGAGGCCACATGTGTTTGCA 60.468 50.000 23.79 0.00 0.00 4.08
532 533 0.038892 CAGAGGCCACATGTGTTTGC 60.039 55.000 23.79 19.02 0.00 3.68
533 534 0.038892 GCAGAGGCCACATGTGTTTG 60.039 55.000 23.79 12.19 0.00 2.93
534 535 0.178981 AGCAGAGGCCACATGTGTTT 60.179 50.000 23.79 9.19 42.56 2.83
535 536 0.692476 TAGCAGAGGCCACATGTGTT 59.308 50.000 23.79 9.55 42.56 3.32
536 537 0.036010 GTAGCAGAGGCCACATGTGT 60.036 55.000 23.79 6.10 42.56 3.72
543 544 3.826754 CGCTCGTAGCAGAGGCCA 61.827 66.667 5.01 0.00 42.58 5.36
549 550 0.042880 CTACTCGTCGCTCGTAGCAG 60.043 60.000 7.47 0.76 42.58 4.24
573 574 1.427020 GCTTTCACTGCTCCATCGC 59.573 57.895 0.00 0.00 0.00 4.58
583 584 3.406361 CGCACGCTCGCTTTCACT 61.406 61.111 0.00 0.00 0.00 3.41
585 586 4.656117 TCCGCACGCTCGCTTTCA 62.656 61.111 0.00 0.00 0.00 2.69
586 587 3.843240 CTCCGCACGCTCGCTTTC 61.843 66.667 0.00 0.00 0.00 2.62
606 608 1.202639 CGCCATGATGTTAGCCCTGTA 60.203 52.381 0.00 0.00 0.00 2.74
607 609 0.464373 CGCCATGATGTTAGCCCTGT 60.464 55.000 0.00 0.00 0.00 4.00
633 635 0.546122 TTCATCTTATGCACGCCCCT 59.454 50.000 0.00 0.00 0.00 4.79
637 639 3.242543 CCTGTCTTTCATCTTATGCACGC 60.243 47.826 0.00 0.00 0.00 5.34
638 640 3.310774 CCCTGTCTTTCATCTTATGCACG 59.689 47.826 0.00 0.00 0.00 5.34
639 641 3.629398 CCCCTGTCTTTCATCTTATGCAC 59.371 47.826 0.00 0.00 0.00 4.57
640 642 3.371917 CCCCCTGTCTTTCATCTTATGCA 60.372 47.826 0.00 0.00 0.00 3.96
641 643 3.117888 TCCCCCTGTCTTTCATCTTATGC 60.118 47.826 0.00 0.00 0.00 3.14
642 644 4.778213 TCCCCCTGTCTTTCATCTTATG 57.222 45.455 0.00 0.00 0.00 1.90
643 645 5.039645 TCTTCCCCCTGTCTTTCATCTTAT 58.960 41.667 0.00 0.00 0.00 1.73
644 646 4.435137 TCTTCCCCCTGTCTTTCATCTTA 58.565 43.478 0.00 0.00 0.00 2.10
645 647 3.260205 TCTTCCCCCTGTCTTTCATCTT 58.740 45.455 0.00 0.00 0.00 2.40
651 653 1.152271 TCCTCTCTTCCCCCTGTCTTT 59.848 52.381 0.00 0.00 0.00 2.52
680 682 1.142060 TCCCCGTGCAAGAAAGAAAGA 59.858 47.619 0.00 0.00 0.00 2.52
681 683 1.604604 TCCCCGTGCAAGAAAGAAAG 58.395 50.000 0.00 0.00 0.00 2.62
682 684 1.953686 CTTCCCCGTGCAAGAAAGAAA 59.046 47.619 0.00 0.00 0.00 2.52
683 685 1.142060 TCTTCCCCGTGCAAGAAAGAA 59.858 47.619 0.00 0.33 0.00 2.52
684 686 0.762418 TCTTCCCCGTGCAAGAAAGA 59.238 50.000 0.00 4.77 0.00 2.52
685 687 1.537202 CTTCTTCCCCGTGCAAGAAAG 59.463 52.381 0.00 2.43 38.00 2.62
793 1443 5.248477 TGAGTAGTATAAATGATCCCTGGGC 59.752 44.000 8.22 0.00 0.00 5.36
809 1459 3.759581 ACCTTCGGTGTTCTGAGTAGTA 58.240 45.455 0.00 0.00 32.98 1.82
810 1460 2.595238 ACCTTCGGTGTTCTGAGTAGT 58.405 47.619 0.00 0.00 32.98 2.73
839 1489 1.200020 GAATTTCCACTGCAACGGGAG 59.800 52.381 1.38 0.00 38.63 4.30
847 1497 2.202479 GCCGCGAATTTCCACTGC 60.202 61.111 8.23 0.00 0.00 4.40
970 1620 4.275508 CATGCTAGCCCCGCCCAT 62.276 66.667 13.29 0.00 0.00 4.00
980 1630 3.241530 TAGCCCCGCCCATGCTAG 61.242 66.667 0.00 0.00 36.57 3.42
981 1631 3.241530 CTAGCCCCGCCCATGCTA 61.242 66.667 0.00 0.00 36.57 3.49
984 1634 4.275508 ATGCTAGCCCCGCCCATG 62.276 66.667 13.29 0.00 0.00 3.66
985 1635 4.275508 CATGCTAGCCCCGCCCAT 62.276 66.667 13.29 0.00 0.00 4.00
1297 1947 3.277742 GAACGTCGCACACCTTCGC 62.278 63.158 0.00 0.00 0.00 4.70
1590 2240 4.992740 TGCCATGCCTTTGCCGGT 62.993 61.111 1.90 0.00 36.33 5.28
1600 2250 1.740025 GTCCAGTACTTCTTGCCATGC 59.260 52.381 0.00 0.00 0.00 4.06
1894 2544 2.282462 CTTGCCTTCCTTGCCGGT 60.282 61.111 1.90 0.00 0.00 5.28
1967 2617 2.823147 GCTGCTTGATGCCGCTCT 60.823 61.111 0.00 0.00 46.27 4.09
1995 2645 0.514691 CAAAGCTGAAGACACGGAGC 59.485 55.000 0.00 0.00 0.00 4.70
2203 2853 4.634004 TGATTTACAGATAAGGTGTTGCGG 59.366 41.667 0.00 0.00 0.00 5.69
2269 2919 6.946340 ACCTGTATCTGTTGTGTATGATCAA 58.054 36.000 0.00 0.00 0.00 2.57
2358 3015 7.308589 CCTCGTCCTTTGTACAAATTCAGAAAT 60.309 37.037 20.83 0.00 0.00 2.17
2615 3272 4.568072 TCAACAATGTGCTGTACCCTAT 57.432 40.909 0.00 0.00 0.00 2.57
2722 3379 2.764314 GCCATGCACTAGCCCGTTG 61.764 63.158 0.00 0.00 41.13 4.10
2825 3482 8.764524 TTGCTAAAAATATGGTAAATTGCGTT 57.235 26.923 0.00 0.00 0.00 4.84
2852 3509 6.037172 GCCATGTATGTTCTCGTTCACTAATT 59.963 38.462 0.00 0.00 0.00 1.40
2884 3541 4.736126 TCCTTCAATATCAACTCGCAGA 57.264 40.909 0.00 0.00 0.00 4.26
2899 3556 3.200605 TGCCAGCATCTTCTATTCCTTCA 59.799 43.478 0.00 0.00 0.00 3.02
2985 3642 2.349886 CAGGTAAAGACAAGCATCGAGC 59.650 50.000 0.00 0.00 46.19 5.03


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.