Multiple sequence alignment - TraesCS4A01G202200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G202200 chr4A 100.000 4733 0 0 1 4733 491918720 491913988 0.000000e+00 8741.0
1 TraesCS4A01G202200 chr4A 96.364 330 11 1 1 330 30151606 30151934 4.170000e-150 542.0
2 TraesCS4A01G202200 chr4A 92.698 315 19 3 3297 3610 492030510 492030199 7.220000e-123 451.0
3 TraesCS4A01G202200 chr4A 81.146 419 55 21 1220 1628 492032406 492032002 9.890000e-82 315.0
4 TraesCS4A01G202200 chr4A 98.039 51 0 1 3267 3316 491915497 491915447 2.350000e-13 87.9
5 TraesCS4A01G202200 chr4B 90.702 1667 85 32 331 1969 115848780 115847156 0.000000e+00 2156.0
6 TraesCS4A01G202200 chr4B 90.517 1044 74 9 1997 3031 115847159 115846132 0.000000e+00 1356.0
7 TraesCS4A01G202200 chr4B 95.491 377 17 0 3267 3643 115845913 115845537 1.880000e-168 603.0
8 TraesCS4A01G202200 chr4B 98.802 334 3 1 1 334 87687991 87687659 1.130000e-165 593.0
9 TraesCS4A01G202200 chr4B 88.544 419 29 8 4329 4733 115844887 115844474 1.530000e-134 490.0
10 TraesCS4A01G202200 chr4B 94.470 217 11 1 3058 3274 115846079 115845864 2.730000e-87 333.0
11 TraesCS4A01G202200 chr4B 81.074 391 51 21 1220 1601 115881546 115881170 1.670000e-74 291.0
12 TraesCS4A01G202200 chr4B 81.250 368 45 16 795 1149 115881982 115881626 4.670000e-70 276.0
13 TraesCS4A01G202200 chr4B 90.052 191 4 3 3632 3817 115845447 115845267 2.850000e-57 233.0
14 TraesCS4A01G202200 chr4B 86.164 159 13 3 3956 4113 115845175 115845025 3.790000e-36 163.0
15 TraesCS4A01G202200 chr4D 91.462 1300 62 16 729 2003 81974670 81973395 0.000000e+00 1740.0
16 TraesCS4A01G202200 chr4D 92.275 712 41 6 2010 2715 81973429 81972726 0.000000e+00 998.0
17 TraesCS4A01G202200 chr4D 87.075 588 38 17 2713 3274 81972603 81972028 8.640000e-177 630.0
18 TraesCS4A01G202200 chr4D 96.399 361 13 0 3267 3627 81972077 81971717 3.150000e-166 595.0
19 TraesCS4A01G202200 chr4D 90.268 411 26 4 331 733 81980192 81979788 4.200000e-145 525.0
20 TraesCS4A01G202200 chr4D 81.511 622 32 34 3632 4218 81971610 81971037 7.270000e-118 435.0
21 TraesCS4A01G202200 chr4D 81.912 387 46 19 1220 1597 81987326 81986955 5.950000e-79 305.0
22 TraesCS4A01G202200 chr4D 89.062 128 14 0 336 463 81981729 81981602 4.900000e-35 159.0
23 TraesCS4A01G202200 chr4D 77.957 186 23 10 972 1146 81987586 81987408 3.010000e-17 100.0
24 TraesCS4A01G202200 chr1A 85.043 1150 121 31 2126 3233 547393308 547392168 0.000000e+00 1123.0
25 TraesCS4A01G202200 chr1A 84.456 1113 118 36 2140 3209 547414004 547412904 0.000000e+00 1046.0
26 TraesCS4A01G202200 chr1A 77.966 944 111 48 608 1537 547417856 547416996 7.070000e-138 501.0
27 TraesCS4A01G202200 chr1A 92.138 318 25 0 3293 3610 547392147 547391830 2.600000e-122 449.0
28 TraesCS4A01G202200 chr1A 88.089 361 36 5 3293 3646 547411103 547410743 5.660000e-114 422.0
29 TraesCS4A01G202200 chr1A 83.678 484 38 23 907 1382 547396007 547395557 7.330000e-113 418.0
30 TraesCS4A01G202200 chr1A 82.812 192 19 9 1544 1725 547395388 547395201 4.900000e-35 159.0
31 TraesCS4A01G202200 chr1A 91.071 56 4 1 3657 3712 547391672 547391618 1.830000e-09 75.0
32 TraesCS4A01G202200 chr1D 84.582 1148 120 32 2172 3269 452626851 452625711 0.000000e+00 1086.0
33 TraesCS4A01G202200 chr1D 77.683 1174 129 75 611 1735 452628006 452626917 1.130000e-165 593.0
34 TraesCS4A01G202200 chr1D 92.767 318 23 0 3293 3610 452625730 452625413 1.200000e-125 460.0
35 TraesCS4A01G202200 chr1D 81.212 165 19 6 1749 1909 452627055 452626899 6.430000e-24 122.0
36 TraesCS4A01G202200 chr1D 89.831 59 4 2 3654 3712 452625246 452625190 1.830000e-09 75.0
37 TraesCS4A01G202200 chr5B 88.074 914 83 16 2373 3266 608202829 608203736 0.000000e+00 1061.0
38 TraesCS4A01G202200 chr5B 87.654 891 70 23 2061 2941 608343278 608344138 0.000000e+00 1000.0
39 TraesCS4A01G202200 chr5B 89.973 369 31 2 3267 3634 608344203 608344566 5.540000e-129 472.0
40 TraesCS4A01G202200 chr5B 88.281 384 36 5 3267 3643 608203694 608204075 7.220000e-123 451.0
41 TraesCS4A01G202200 chr5B 78.279 732 77 44 991 1690 608199695 608200376 3.430000e-106 396.0
42 TraesCS4A01G202200 chr5B 81.686 344 29 21 1072 1383 608340621 608340962 6.080000e-64 255.0
43 TraesCS4A01G202200 chr5B 86.878 221 20 3 1749 1969 608089122 608089333 6.120000e-59 239.0
44 TraesCS4A01G202200 chr5B 81.467 259 28 9 1479 1735 608089014 608089254 1.340000e-45 195.0
45 TraesCS4A01G202200 chr5B 87.200 125 11 2 3142 3266 608344126 608344245 2.300000e-28 137.0
46 TraesCS4A01G202200 chr5B 85.714 98 3 2 1749 1842 608200286 608200376 5.040000e-15 93.5
47 TraesCS4A01G202200 chr5B 82.524 103 16 1 4118 4218 632144551 632144449 6.520000e-14 89.8
48 TraesCS4A01G202200 chr5B 84.694 98 4 2 1749 1842 608341147 608341237 2.350000e-13 87.9
49 TraesCS4A01G202200 chr5D 85.429 851 79 27 1818 2642 493121126 493121957 0.000000e+00 843.0
50 TraesCS4A01G202200 chr5D 88.796 357 32 6 2689 3037 493121956 493122312 9.410000e-117 431.0
51 TraesCS4A01G202200 chr5D 77.073 820 93 53 954 1745 493120453 493121205 7.430000e-103 385.0
52 TraesCS4A01G202200 chr5D 82.569 327 42 9 1226 1547 299832759 299833075 1.680000e-69 274.0
53 TraesCS4A01G202200 chr5D 88.940 217 22 2 3058 3274 493122361 493122575 2.810000e-67 267.0
54 TraesCS4A01G202200 chr5A 84.841 851 83 30 1818 2642 616069774 616070604 0.000000e+00 815.0
55 TraesCS4A01G202200 chr5A 99.094 331 3 0 1 331 570176899 570176569 3.150000e-166 595.0
56 TraesCS4A01G202200 chr5A 95.166 331 16 0 1 331 666296600 666296930 1.510000e-144 523.0
57 TraesCS4A01G202200 chr5A 85.170 499 39 20 2689 3152 616070603 616071101 3.310000e-131 479.0
58 TraesCS4A01G202200 chr5A 78.412 718 74 42 954 1640 616069099 616069766 4.440000e-105 392.0
59 TraesCS4A01G202200 chr5A 82.445 319 38 12 1229 1545 397249879 397250181 3.630000e-66 263.0
60 TraesCS4A01G202200 chr5A 100.000 37 0 0 1106 1142 397249747 397249783 8.500000e-08 69.4
61 TraesCS4A01G202200 chr1B 84.407 776 79 20 2172 2930 622708097 622707347 0.000000e+00 725.0
62 TraesCS4A01G202200 chr1B 85.010 487 41 21 907 1384 622709060 622708597 2.580000e-127 466.0
63 TraesCS4A01G202200 chr1B 89.636 357 30 5 3293 3642 622706951 622706595 9.340000e-122 448.0
64 TraesCS4A01G202200 chr1B 84.776 335 28 14 2920 3233 622707304 622706972 9.890000e-82 315.0
65 TraesCS4A01G202200 chr1B 83.525 261 27 11 1478 1725 622708502 622708245 3.680000e-56 230.0
66 TraesCS4A01G202200 chr1B 90.000 60 5 1 3653 3712 622706468 622706410 5.080000e-10 76.8
67 TraesCS4A01G202200 chr6A 99.698 331 0 1 1 331 294642017 294642346 5.240000e-169 604.0
68 TraesCS4A01G202200 chr7B 98.788 330 3 1 1 330 718983182 718982854 1.900000e-163 586.0
69 TraesCS4A01G202200 chr7B 92.012 338 25 2 1 338 629874092 629873757 1.540000e-129 473.0
70 TraesCS4A01G202200 chr7A 97.281 331 9 0 1 331 661170070 661169740 3.200000e-156 562.0
71 TraesCS4A01G202200 chr7A 95.468 331 15 0 1 331 268183616 268183286 3.240000e-146 529.0
72 TraesCS4A01G202200 chr7A 81.159 138 16 7 4085 4218 156321054 156321185 8.380000e-18 102.0
73 TraesCS4A01G202200 chr6B 82.222 135 16 5 4085 4217 665038327 665038199 5.010000e-20 110.0
74 TraesCS4A01G202200 chr7D 82.540 126 16 3 4095 4218 573118018 573118139 6.480000e-19 106.0
75 TraesCS4A01G202200 chr6D 81.752 137 13 10 4097 4229 466917545 466917417 2.330000e-18 104.0
76 TraesCS4A01G202200 chr2D 81.295 139 15 8 4084 4219 21664092 21664222 8.380000e-18 102.0
77 TraesCS4A01G202200 chr2D 81.295 139 15 8 4084 4219 21680507 21680637 8.380000e-18 102.0
78 TraesCS4A01G202200 chr2D 81.061 132 13 9 4091 4219 21641699 21641821 1.400000e-15 95.3
79 TraesCS4A01G202200 chr3D 81.102 127 18 4 4094 4218 403106466 403106588 3.900000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G202200 chr4A 491913988 491918720 4732 True 4414.450000 8741 99.019500 1 4733 2 chr4A.!!$R1 4732
1 TraesCS4A01G202200 chr4A 492030199 492032406 2207 True 383.000000 451 86.922000 1220 3610 2 chr4A.!!$R2 2390
2 TraesCS4A01G202200 chr4B 115844474 115848780 4306 True 762.000000 2156 90.848571 331 4733 7 chr4B.!!$R2 4402
3 TraesCS4A01G202200 chr4B 115881170 115881982 812 True 283.500000 291 81.162000 795 1601 2 chr4B.!!$R3 806
4 TraesCS4A01G202200 chr4D 81971037 81974670 3633 True 879.600000 1740 89.744400 729 4218 5 chr4D.!!$R1 3489
5 TraesCS4A01G202200 chr4D 81979788 81981729 1941 True 342.000000 525 89.665000 331 733 2 chr4D.!!$R2 402
6 TraesCS4A01G202200 chr4D 81986955 81987586 631 True 202.500000 305 79.934500 972 1597 2 chr4D.!!$R3 625
7 TraesCS4A01G202200 chr1A 547410743 547417856 7113 True 656.333333 1046 83.503667 608 3646 3 chr1A.!!$R2 3038
8 TraesCS4A01G202200 chr1A 547391618 547396007 4389 True 444.800000 1123 86.948400 907 3712 5 chr1A.!!$R1 2805
9 TraesCS4A01G202200 chr1D 452625190 452628006 2816 True 467.200000 1086 85.215000 611 3712 5 chr1D.!!$R1 3101
10 TraesCS4A01G202200 chr5B 608199695 608204075 4380 False 500.375000 1061 85.087000 991 3643 4 chr5B.!!$F2 2652
11 TraesCS4A01G202200 chr5B 608340621 608344566 3945 False 390.380000 1000 86.241400 1072 3634 5 chr5B.!!$F3 2562
12 TraesCS4A01G202200 chr5D 493120453 493122575 2122 False 481.500000 843 85.059500 954 3274 4 chr5D.!!$F2 2320
13 TraesCS4A01G202200 chr5A 616069099 616071101 2002 False 562.000000 815 82.807667 954 3152 3 chr5A.!!$F3 2198
14 TraesCS4A01G202200 chr1B 622706410 622709060 2650 True 376.800000 725 86.225667 907 3712 6 chr1B.!!$R1 2805

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
132 133 0.035458 ACTTTGTCCCTCTTGCCTCG 59.965 55.0 0.00 0.0 0.00 4.63 F
140 141 0.035458 CCTCTTGCCTCGGTCTTTGT 59.965 55.0 0.00 0.0 0.00 2.83 F
962 2552 0.106868 TACTCGCCGATTCCTCCAGA 60.107 55.0 0.00 0.0 0.00 3.86 F
1420 3099 0.175073 GTCAGGACGGGTATGGTGAC 59.825 60.0 0.00 0.0 0.00 3.67 F
1983 10205 0.250901 ATTTTGTCAGCTGCCGACCT 60.251 50.0 9.47 0.0 32.15 3.85 F
1992 10214 0.394565 GCTGCCGACCTCCTCATTAT 59.605 55.0 0.00 0.0 0.00 1.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1999 10221 0.100503 GCAGCTGACAAAAACGTGGT 59.899 50.0 20.43 0.00 0.00 4.16 R
2004 10226 0.317854 GGTCGGCAGCTGACAAAAAC 60.318 55.0 31.23 13.24 41.15 2.43 R
2005 10227 0.465460 AGGTCGGCAGCTGACAAAAA 60.465 50.0 31.23 0.00 41.15 1.94 R
2594 11084 0.674895 GTAGCACCAAGTCCTGCAGG 60.675 60.0 27.87 27.87 35.73 4.85 R
3583 14114 0.460109 CGTCCATCCTCATGACGCAA 60.460 55.0 0.00 0.00 31.44 4.85 R
3952 14629 0.843309 TGGAAGGGCTGTCAAGAACA 59.157 50.0 0.00 0.00 36.18 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 9.878599 GTATAGGAATATGAAACAAATGGAACG 57.121 33.333 0.00 0.00 0.00 3.95
46 47 6.834168 AGGAATATGAAACAAATGGAACGT 57.166 33.333 0.00 0.00 0.00 3.99
47 48 7.227049 AGGAATATGAAACAAATGGAACGTT 57.773 32.000 0.00 0.00 0.00 3.99
48 49 7.666623 AGGAATATGAAACAAATGGAACGTTT 58.333 30.769 0.46 0.00 35.63 3.60
49 50 7.598493 AGGAATATGAAACAAATGGAACGTTTG 59.402 33.333 0.46 11.27 41.22 2.93
50 51 7.596995 GGAATATGAAACAAATGGAACGTTTGA 59.403 33.333 17.85 0.00 38.51 2.69
51 52 8.879342 AATATGAAACAAATGGAACGTTTGAA 57.121 26.923 17.85 0.00 38.51 2.69
52 53 8.879342 ATATGAAACAAATGGAACGTTTGAAA 57.121 26.923 17.85 4.00 38.51 2.69
53 54 7.784633 ATGAAACAAATGGAACGTTTGAAAT 57.215 28.000 17.85 5.99 38.51 2.17
54 55 6.998338 TGAAACAAATGGAACGTTTGAAATG 58.002 32.000 17.85 2.57 38.51 2.32
55 56 5.402464 AACAAATGGAACGTTTGAAATGC 57.598 34.783 17.85 0.00 38.51 3.56
56 57 4.437239 ACAAATGGAACGTTTGAAATGCA 58.563 34.783 17.85 0.00 38.51 3.96
57 58 4.507388 ACAAATGGAACGTTTGAAATGCAG 59.493 37.500 17.85 0.00 38.51 4.41
58 59 2.791383 TGGAACGTTTGAAATGCAGG 57.209 45.000 0.46 0.00 0.00 4.85
59 60 2.302260 TGGAACGTTTGAAATGCAGGA 58.698 42.857 0.46 0.00 0.00 3.86
60 61 2.690497 TGGAACGTTTGAAATGCAGGAA 59.310 40.909 0.46 0.00 0.00 3.36
61 62 3.049912 GGAACGTTTGAAATGCAGGAAC 58.950 45.455 0.46 0.00 0.00 3.62
62 63 3.243401 GGAACGTTTGAAATGCAGGAACT 60.243 43.478 0.46 0.00 43.88 3.01
78 79 5.397142 AGGAACTGAAATCAAAGGAATGC 57.603 39.130 0.00 0.00 37.18 3.56
79 80 4.834496 AGGAACTGAAATCAAAGGAATGCA 59.166 37.500 0.00 0.00 37.18 3.96
80 81 5.482878 AGGAACTGAAATCAAAGGAATGCAT 59.517 36.000 0.00 0.00 37.18 3.96
81 82 6.013984 AGGAACTGAAATCAAAGGAATGCATT 60.014 34.615 12.83 12.83 37.18 3.56
82 83 7.178983 AGGAACTGAAATCAAAGGAATGCATTA 59.821 33.333 12.97 0.00 37.18 1.90
83 84 7.983484 GGAACTGAAATCAAAGGAATGCATTAT 59.017 33.333 12.97 0.85 0.00 1.28
84 85 9.374838 GAACTGAAATCAAAGGAATGCATTATT 57.625 29.630 12.97 7.72 0.00 1.40
85 86 9.729281 AACTGAAATCAAAGGAATGCATTATTT 57.271 25.926 12.97 12.99 0.00 1.40
97 98 9.343539 AGGAATGCATTATTTAGTAGAGAAACC 57.656 33.333 12.97 3.28 0.00 3.27
98 99 9.120538 GGAATGCATTATTTAGTAGAGAAACCA 57.879 33.333 12.97 0.00 0.00 3.67
101 102 7.930217 TGCATTATTTAGTAGAGAAACCATGC 58.070 34.615 0.00 0.00 36.24 4.06
102 103 7.072030 GCATTATTTAGTAGAGAAACCATGCG 58.928 38.462 0.00 0.00 30.70 4.73
103 104 6.598753 TTATTTAGTAGAGAAACCATGCGC 57.401 37.500 0.00 0.00 0.00 6.09
104 105 3.887621 TTAGTAGAGAAACCATGCGCT 57.112 42.857 9.73 0.00 0.00 5.92
105 106 2.015736 AGTAGAGAAACCATGCGCTG 57.984 50.000 9.73 4.25 0.00 5.18
113 114 3.512035 CCATGCGCTGGTATGCAA 58.488 55.556 9.73 0.00 45.45 4.08
114 115 1.064621 CCATGCGCTGGTATGCAAC 59.935 57.895 9.73 0.00 45.45 4.17
115 116 1.378882 CCATGCGCTGGTATGCAACT 61.379 55.000 9.73 0.00 45.45 3.16
116 117 0.452987 CATGCGCTGGTATGCAACTT 59.547 50.000 9.73 0.00 45.45 2.66
117 118 1.135315 CATGCGCTGGTATGCAACTTT 60.135 47.619 9.73 0.00 45.45 2.66
118 119 0.240678 TGCGCTGGTATGCAACTTTG 59.759 50.000 9.73 0.00 38.34 2.77
119 120 0.240945 GCGCTGGTATGCAACTTTGT 59.759 50.000 0.00 0.00 0.00 2.83
120 121 1.729149 GCGCTGGTATGCAACTTTGTC 60.729 52.381 0.00 0.00 0.00 3.18
121 122 1.135689 CGCTGGTATGCAACTTTGTCC 60.136 52.381 0.00 0.00 0.00 4.02
122 123 1.202348 GCTGGTATGCAACTTTGTCCC 59.798 52.381 0.00 0.00 0.00 4.46
123 124 2.795329 CTGGTATGCAACTTTGTCCCT 58.205 47.619 0.00 0.00 0.00 4.20
124 125 2.749621 CTGGTATGCAACTTTGTCCCTC 59.250 50.000 0.00 0.00 0.00 4.30
125 126 2.375174 TGGTATGCAACTTTGTCCCTCT 59.625 45.455 0.00 0.00 0.00 3.69
126 127 3.181434 TGGTATGCAACTTTGTCCCTCTT 60.181 43.478 0.00 0.00 0.00 2.85
127 128 3.191371 GGTATGCAACTTTGTCCCTCTTG 59.809 47.826 0.00 0.00 0.00 3.02
128 129 1.032014 TGCAACTTTGTCCCTCTTGC 58.968 50.000 0.00 0.00 38.16 4.01
129 130 0.315251 GCAACTTTGTCCCTCTTGCC 59.685 55.000 0.00 0.00 32.71 4.52
130 131 1.986882 CAACTTTGTCCCTCTTGCCT 58.013 50.000 0.00 0.00 0.00 4.75
131 132 1.882623 CAACTTTGTCCCTCTTGCCTC 59.117 52.381 0.00 0.00 0.00 4.70
132 133 0.035458 ACTTTGTCCCTCTTGCCTCG 59.965 55.000 0.00 0.00 0.00 4.63
133 134 0.674895 CTTTGTCCCTCTTGCCTCGG 60.675 60.000 0.00 0.00 0.00 4.63
134 135 1.415672 TTTGTCCCTCTTGCCTCGGT 61.416 55.000 0.00 0.00 0.00 4.69
135 136 1.827399 TTGTCCCTCTTGCCTCGGTC 61.827 60.000 0.00 0.00 0.00 4.79
136 137 1.985116 GTCCCTCTTGCCTCGGTCT 60.985 63.158 0.00 0.00 0.00 3.85
137 138 1.229209 TCCCTCTTGCCTCGGTCTT 60.229 57.895 0.00 0.00 0.00 3.01
138 139 0.836400 TCCCTCTTGCCTCGGTCTTT 60.836 55.000 0.00 0.00 0.00 2.52
139 140 0.674895 CCCTCTTGCCTCGGTCTTTG 60.675 60.000 0.00 0.00 0.00 2.77
140 141 0.035458 CCTCTTGCCTCGGTCTTTGT 59.965 55.000 0.00 0.00 0.00 2.83
141 142 1.151668 CTCTTGCCTCGGTCTTTGTG 58.848 55.000 0.00 0.00 0.00 3.33
142 143 0.468226 TCTTGCCTCGGTCTTTGTGT 59.532 50.000 0.00 0.00 0.00 3.72
143 144 1.689813 TCTTGCCTCGGTCTTTGTGTA 59.310 47.619 0.00 0.00 0.00 2.90
144 145 2.103432 TCTTGCCTCGGTCTTTGTGTAA 59.897 45.455 0.00 0.00 0.00 2.41
145 146 2.623878 TGCCTCGGTCTTTGTGTAAA 57.376 45.000 0.00 0.00 0.00 2.01
146 147 2.920524 TGCCTCGGTCTTTGTGTAAAA 58.079 42.857 0.00 0.00 0.00 1.52
147 148 3.280295 TGCCTCGGTCTTTGTGTAAAAA 58.720 40.909 0.00 0.00 0.00 1.94
168 169 6.625873 AAAAGAGGTCTGACTCAATGTTTC 57.374 37.500 7.85 0.00 39.97 2.78
169 170 4.963318 AGAGGTCTGACTCAATGTTTCA 57.037 40.909 7.85 0.00 39.97 2.69
170 171 4.636249 AGAGGTCTGACTCAATGTTTCAC 58.364 43.478 7.85 0.00 39.97 3.18
171 172 4.346418 AGAGGTCTGACTCAATGTTTCACT 59.654 41.667 7.85 0.00 39.97 3.41
172 173 5.041191 AGGTCTGACTCAATGTTTCACTT 57.959 39.130 7.85 0.00 0.00 3.16
173 174 5.059833 AGGTCTGACTCAATGTTTCACTTC 58.940 41.667 7.85 0.00 0.00 3.01
174 175 4.816385 GGTCTGACTCAATGTTTCACTTCA 59.184 41.667 7.85 0.00 0.00 3.02
175 176 5.471456 GGTCTGACTCAATGTTTCACTTCAT 59.529 40.000 7.85 0.00 0.00 2.57
176 177 6.369005 GTCTGACTCAATGTTTCACTTCATG 58.631 40.000 0.00 0.00 0.00 3.07
177 178 5.049198 TCTGACTCAATGTTTCACTTCATGC 60.049 40.000 0.00 0.00 0.00 4.06
178 179 4.151258 ACTCAATGTTTCACTTCATGCG 57.849 40.909 0.00 0.00 0.00 4.73
179 180 3.814842 ACTCAATGTTTCACTTCATGCGA 59.185 39.130 0.00 0.00 0.00 5.10
180 181 4.275689 ACTCAATGTTTCACTTCATGCGAA 59.724 37.500 0.00 0.00 0.00 4.70
181 182 5.180367 TCAATGTTTCACTTCATGCGAAA 57.820 34.783 0.00 0.00 0.00 3.46
182 183 5.771469 TCAATGTTTCACTTCATGCGAAAT 58.229 33.333 0.00 0.00 30.66 2.17
183 184 5.858049 TCAATGTTTCACTTCATGCGAAATC 59.142 36.000 0.00 0.00 30.66 2.17
184 185 4.827304 TGTTTCACTTCATGCGAAATCA 57.173 36.364 0.00 0.00 30.66 2.57
185 186 4.536065 TGTTTCACTTCATGCGAAATCAC 58.464 39.130 0.00 0.00 30.66 3.06
186 187 4.036144 TGTTTCACTTCATGCGAAATCACA 59.964 37.500 0.00 0.00 30.66 3.58
187 188 4.408993 TTCACTTCATGCGAAATCACAG 57.591 40.909 0.00 0.00 0.00 3.66
188 189 2.743664 TCACTTCATGCGAAATCACAGG 59.256 45.455 0.00 0.00 0.00 4.00
189 190 2.743664 CACTTCATGCGAAATCACAGGA 59.256 45.455 0.00 0.00 0.00 3.86
190 191 3.189080 CACTTCATGCGAAATCACAGGAA 59.811 43.478 0.00 0.00 35.51 3.36
191 192 3.820467 ACTTCATGCGAAATCACAGGAAA 59.180 39.130 1.02 0.00 36.30 3.13
192 193 3.829886 TCATGCGAAATCACAGGAAAC 57.170 42.857 0.00 0.00 0.00 2.78
193 194 2.487762 TCATGCGAAATCACAGGAAACC 59.512 45.455 0.00 0.00 0.00 3.27
194 195 1.974265 TGCGAAATCACAGGAAACCA 58.026 45.000 0.00 0.00 0.00 3.67
195 196 2.302260 TGCGAAATCACAGGAAACCAA 58.698 42.857 0.00 0.00 0.00 3.67
196 197 2.034053 TGCGAAATCACAGGAAACCAAC 59.966 45.455 0.00 0.00 0.00 3.77
197 198 2.034053 GCGAAATCACAGGAAACCAACA 59.966 45.455 0.00 0.00 0.00 3.33
198 199 3.853307 GCGAAATCACAGGAAACCAACAG 60.853 47.826 0.00 0.00 0.00 3.16
199 200 3.315191 CGAAATCACAGGAAACCAACAGT 59.685 43.478 0.00 0.00 0.00 3.55
200 201 4.610945 GAAATCACAGGAAACCAACAGTG 58.389 43.478 0.00 0.00 0.00 3.66
201 202 2.799126 TCACAGGAAACCAACAGTGT 57.201 45.000 0.00 0.00 0.00 3.55
202 203 3.080300 TCACAGGAAACCAACAGTGTT 57.920 42.857 1.64 1.64 0.00 3.32
203 204 3.426615 TCACAGGAAACCAACAGTGTTT 58.573 40.909 5.57 0.00 38.57 2.83
204 205 3.442273 TCACAGGAAACCAACAGTGTTTC 59.558 43.478 5.57 1.07 46.85 2.78
205 206 3.443681 CACAGGAAACCAACAGTGTTTCT 59.556 43.478 5.57 0.00 46.78 2.52
206 207 3.694566 ACAGGAAACCAACAGTGTTTCTC 59.305 43.478 5.57 0.67 46.78 2.87
207 208 3.947834 CAGGAAACCAACAGTGTTTCTCT 59.052 43.478 5.57 8.22 46.78 3.10
208 209 3.947834 AGGAAACCAACAGTGTTTCTCTG 59.052 43.478 5.57 0.00 46.78 3.35
209 210 3.066760 GGAAACCAACAGTGTTTCTCTGG 59.933 47.826 5.57 7.61 46.78 3.86
210 211 3.644966 AACCAACAGTGTTTCTCTGGA 57.355 42.857 16.18 0.00 37.25 3.86
211 212 3.864789 ACCAACAGTGTTTCTCTGGAT 57.135 42.857 16.18 0.41 37.25 3.41
212 213 4.170468 ACCAACAGTGTTTCTCTGGATT 57.830 40.909 16.18 0.00 37.25 3.01
213 214 3.885297 ACCAACAGTGTTTCTCTGGATTG 59.115 43.478 16.18 0.00 37.25 2.67
214 215 3.304928 CCAACAGTGTTTCTCTGGATTGC 60.305 47.826 5.57 0.00 37.25 3.56
215 216 3.213206 ACAGTGTTTCTCTGGATTGCA 57.787 42.857 0.00 0.00 37.25 4.08
216 217 3.554934 ACAGTGTTTCTCTGGATTGCAA 58.445 40.909 0.00 0.00 37.25 4.08
217 218 3.316308 ACAGTGTTTCTCTGGATTGCAAC 59.684 43.478 0.00 0.00 37.25 4.17
218 219 3.316029 CAGTGTTTCTCTGGATTGCAACA 59.684 43.478 0.00 0.00 0.00 3.33
219 220 3.567164 AGTGTTTCTCTGGATTGCAACAG 59.433 43.478 0.00 5.95 36.07 3.16
220 221 3.316308 GTGTTTCTCTGGATTGCAACAGT 59.684 43.478 14.65 0.00 36.17 3.55
221 222 4.515191 GTGTTTCTCTGGATTGCAACAGTA 59.485 41.667 14.65 4.53 36.17 2.74
222 223 5.182001 GTGTTTCTCTGGATTGCAACAGTAT 59.818 40.000 14.65 0.00 36.17 2.12
223 224 5.769662 TGTTTCTCTGGATTGCAACAGTATT 59.230 36.000 14.65 0.00 36.17 1.89
224 225 6.072508 TGTTTCTCTGGATTGCAACAGTATTC 60.073 38.462 14.65 2.43 36.17 1.75
225 226 4.517285 TCTCTGGATTGCAACAGTATTCC 58.483 43.478 14.65 11.26 36.17 3.01
226 227 4.225942 TCTCTGGATTGCAACAGTATTCCT 59.774 41.667 14.65 0.00 36.17 3.36
227 228 4.517285 TCTGGATTGCAACAGTATTCCTC 58.483 43.478 14.65 0.42 36.17 3.71
228 229 3.620488 TGGATTGCAACAGTATTCCTCC 58.380 45.455 14.05 9.01 0.00 4.30
229 230 3.010027 TGGATTGCAACAGTATTCCTCCA 59.990 43.478 14.05 11.24 0.00 3.86
230 231 4.210331 GGATTGCAACAGTATTCCTCCAT 58.790 43.478 0.00 0.00 0.00 3.41
231 232 5.104151 TGGATTGCAACAGTATTCCTCCATA 60.104 40.000 14.05 0.00 0.00 2.74
232 233 5.239525 GGATTGCAACAGTATTCCTCCATAC 59.760 44.000 0.00 0.00 0.00 2.39
233 234 5.435686 TTGCAACAGTATTCCTCCATACT 57.564 39.130 0.00 0.00 40.08 2.12
234 235 5.435686 TGCAACAGTATTCCTCCATACTT 57.564 39.130 0.00 0.00 37.81 2.24
235 236 5.185454 TGCAACAGTATTCCTCCATACTTG 58.815 41.667 0.00 0.00 37.81 3.16
236 237 5.186198 GCAACAGTATTCCTCCATACTTGT 58.814 41.667 0.00 0.00 37.81 3.16
237 238 5.648092 GCAACAGTATTCCTCCATACTTGTT 59.352 40.000 0.00 0.00 37.81 2.83
238 239 6.183360 GCAACAGTATTCCTCCATACTTGTTC 60.183 42.308 0.00 0.00 37.81 3.18
239 240 5.990668 ACAGTATTCCTCCATACTTGTTCC 58.009 41.667 0.00 0.00 37.81 3.62
240 241 5.726793 ACAGTATTCCTCCATACTTGTTCCT 59.273 40.000 0.00 0.00 37.81 3.36
241 242 6.051717 CAGTATTCCTCCATACTTGTTCCTG 58.948 44.000 0.00 0.00 37.81 3.86
242 243 3.350219 TTCCTCCATACTTGTTCCTGC 57.650 47.619 0.00 0.00 0.00 4.85
243 244 2.265367 TCCTCCATACTTGTTCCTGCA 58.735 47.619 0.00 0.00 0.00 4.41
244 245 2.642311 TCCTCCATACTTGTTCCTGCAA 59.358 45.455 0.00 0.00 0.00 4.08
245 246 3.073798 TCCTCCATACTTGTTCCTGCAAA 59.926 43.478 0.00 0.00 0.00 3.68
246 247 4.019174 CCTCCATACTTGTTCCTGCAAAT 58.981 43.478 0.00 0.00 0.00 2.32
247 248 4.096984 CCTCCATACTTGTTCCTGCAAATC 59.903 45.833 0.00 0.00 0.00 2.17
248 249 4.661222 TCCATACTTGTTCCTGCAAATCA 58.339 39.130 0.00 0.00 0.00 2.57
249 250 5.076182 TCCATACTTGTTCCTGCAAATCAA 58.924 37.500 0.00 0.00 0.00 2.57
250 251 5.538053 TCCATACTTGTTCCTGCAAATCAAA 59.462 36.000 0.00 0.00 0.00 2.69
251 252 5.634859 CCATACTTGTTCCTGCAAATCAAAC 59.365 40.000 0.00 0.00 0.00 2.93
252 253 4.734398 ACTTGTTCCTGCAAATCAAACA 57.266 36.364 0.00 0.00 0.00 2.83
253 254 5.280654 ACTTGTTCCTGCAAATCAAACAT 57.719 34.783 0.00 0.00 28.75 2.71
254 255 5.291971 ACTTGTTCCTGCAAATCAAACATC 58.708 37.500 0.00 0.00 28.75 3.06
255 256 3.899734 TGTTCCTGCAAATCAAACATCG 58.100 40.909 0.00 0.00 0.00 3.84
256 257 2.634982 TCCTGCAAATCAAACATCGC 57.365 45.000 0.00 0.00 0.00 4.58
257 258 2.161855 TCCTGCAAATCAAACATCGCT 58.838 42.857 0.00 0.00 0.00 4.93
258 259 3.342719 TCCTGCAAATCAAACATCGCTA 58.657 40.909 0.00 0.00 0.00 4.26
259 260 3.126858 TCCTGCAAATCAAACATCGCTAC 59.873 43.478 0.00 0.00 0.00 3.58
260 261 3.119884 CCTGCAAATCAAACATCGCTACA 60.120 43.478 0.00 0.00 0.00 2.74
261 262 4.082274 TGCAAATCAAACATCGCTACAG 57.918 40.909 0.00 0.00 0.00 2.74
262 263 3.501828 TGCAAATCAAACATCGCTACAGT 59.498 39.130 0.00 0.00 0.00 3.55
263 264 4.693095 TGCAAATCAAACATCGCTACAGTA 59.307 37.500 0.00 0.00 0.00 2.74
264 265 5.163864 TGCAAATCAAACATCGCTACAGTAG 60.164 40.000 2.85 2.85 0.00 2.57
280 281 7.664082 CTACAGTAGCAAATCCTATGGAATG 57.336 40.000 0.00 0.00 34.34 2.67
281 282 6.252599 ACAGTAGCAAATCCTATGGAATGA 57.747 37.500 6.86 0.00 34.34 2.57
282 283 6.294473 ACAGTAGCAAATCCTATGGAATGAG 58.706 40.000 6.86 0.00 34.34 2.90
283 284 6.100279 ACAGTAGCAAATCCTATGGAATGAGA 59.900 38.462 6.86 0.00 34.34 3.27
284 285 6.994496 CAGTAGCAAATCCTATGGAATGAGAA 59.006 38.462 6.86 0.00 34.34 2.87
285 286 7.664731 CAGTAGCAAATCCTATGGAATGAGAAT 59.335 37.037 6.86 0.00 34.34 2.40
286 287 8.223330 AGTAGCAAATCCTATGGAATGAGAATT 58.777 33.333 6.86 0.00 34.34 2.17
287 288 7.521871 AGCAAATCCTATGGAATGAGAATTC 57.478 36.000 0.00 0.00 34.34 2.17
296 297 4.440839 GGAATGAGAATTCCTGCGTTTT 57.559 40.909 9.73 0.00 45.07 2.43
297 298 4.809673 GGAATGAGAATTCCTGCGTTTTT 58.190 39.130 9.73 0.00 45.07 1.94
298 299 4.859245 GGAATGAGAATTCCTGCGTTTTTC 59.141 41.667 9.73 0.00 45.07 2.29
299 300 3.915437 TGAGAATTCCTGCGTTTTTCC 57.085 42.857 0.65 0.00 0.00 3.13
300 301 3.486383 TGAGAATTCCTGCGTTTTTCCT 58.514 40.909 0.65 0.00 0.00 3.36
301 302 4.647611 TGAGAATTCCTGCGTTTTTCCTA 58.352 39.130 0.65 0.00 0.00 2.94
302 303 5.253330 TGAGAATTCCTGCGTTTTTCCTAT 58.747 37.500 0.65 0.00 0.00 2.57
303 304 5.123820 TGAGAATTCCTGCGTTTTTCCTATG 59.876 40.000 0.65 0.00 0.00 2.23
304 305 5.253330 AGAATTCCTGCGTTTTTCCTATGA 58.747 37.500 0.65 0.00 0.00 2.15
305 306 5.710099 AGAATTCCTGCGTTTTTCCTATGAA 59.290 36.000 0.65 0.00 0.00 2.57
306 307 5.975693 ATTCCTGCGTTTTTCCTATGAAA 57.024 34.783 0.00 0.00 38.69 2.69
307 308 5.776173 TTCCTGCGTTTTTCCTATGAAAA 57.224 34.783 2.19 2.19 46.11 2.29
324 325 9.374838 CCTATGAAAAATCCTTCAAATCAAAGG 57.625 33.333 0.00 0.00 43.94 3.11
329 330 2.807676 TCCTTCAAATCAAAGGAGGCC 58.192 47.619 0.00 0.00 45.74 5.19
412 1956 9.039870 CATTCTATGTAGACTTGTGAATCTTCC 57.960 37.037 0.00 0.00 30.81 3.46
430 1974 4.770531 TCTTCCGGAGAGAACAATAGAACA 59.229 41.667 3.34 0.00 0.00 3.18
432 1976 3.447586 TCCGGAGAGAACAATAGAACAGG 59.552 47.826 0.00 0.00 0.00 4.00
434 1978 4.100189 CCGGAGAGAACAATAGAACAGGAT 59.900 45.833 0.00 0.00 0.00 3.24
579 2136 2.903784 TGGACTTTTCAGCTGCCTACTA 59.096 45.455 9.47 0.00 0.00 1.82
592 2149 6.592994 CAGCTGCCTACTACACGTATAGTATA 59.407 42.308 13.81 3.95 37.10 1.47
611 2168 7.230466 AGTATAATTTCTAGCAAAACGACGG 57.770 36.000 0.00 0.00 0.00 4.79
659 2219 1.715993 GAGGAGGACGCTGTTCTTTC 58.284 55.000 0.00 0.00 0.00 2.62
660 2220 1.000955 GAGGAGGACGCTGTTCTTTCA 59.999 52.381 0.00 0.00 0.00 2.69
713 2278 1.079543 CACCAAGTCAGCCCTCTCG 60.080 63.158 0.00 0.00 0.00 4.04
962 2552 0.106868 TACTCGCCGATTCCTCCAGA 60.107 55.000 0.00 0.00 0.00 3.86
1018 2618 4.566004 TCGTTCCTCACCAAAATCTACAG 58.434 43.478 0.00 0.00 0.00 2.74
1032 2633 0.792640 CTACAGCCAACGAACTGCAG 59.207 55.000 13.48 13.48 37.42 4.41
1056 2664 1.135257 AGAAACAGCGACAGAGATCCG 60.135 52.381 0.00 0.00 0.00 4.18
1143 2759 3.068590 AGGTGATCAAGTGCAAAGGTTTG 59.931 43.478 0.00 0.00 41.03 2.93
1144 2760 3.181476 GGTGATCAAGTGCAAAGGTTTGT 60.181 43.478 0.00 0.00 40.24 2.83
1145 2761 4.432712 GTGATCAAGTGCAAAGGTTTGTT 58.567 39.130 0.00 0.00 40.24 2.83
1146 2762 4.869861 GTGATCAAGTGCAAAGGTTTGTTT 59.130 37.500 0.00 0.00 40.24 2.83
1155 2771 4.688413 TGCAAAGGTTTGTTTGTTTCTGAC 59.312 37.500 4.45 0.00 39.27 3.51
1158 2774 5.975693 AAGGTTTGTTTGTTTCTGACAGA 57.024 34.783 0.00 0.00 39.94 3.41
1194 2825 6.748658 TCATCTGATTTTGATTTGATTGACGC 59.251 34.615 0.00 0.00 0.00 5.19
1217 2860 3.117888 TGGAGGGTGGAGATCTAAATTGC 60.118 47.826 0.00 0.00 0.00 3.56
1404 3072 3.679502 CACACAATTGCATCTCGTAGTCA 59.320 43.478 5.05 0.00 0.00 3.41
1420 3099 0.175073 GTCAGGACGGGTATGGTGAC 59.825 60.000 0.00 0.00 0.00 3.67
1421 3100 1.141019 CAGGACGGGTATGGTGACG 59.859 63.158 0.00 0.00 0.00 4.35
1570 6140 7.901029 TCTGTCTCTGTCTTATTCTGTTTCAT 58.099 34.615 0.00 0.00 0.00 2.57
1640 6220 6.861065 TGTTGGCTTTCTAGTTTTAGTCAG 57.139 37.500 0.00 0.00 0.00 3.51
1642 6222 6.706270 TGTTGGCTTTCTAGTTTTAGTCAGAG 59.294 38.462 0.00 0.00 0.00 3.35
1847 6451 5.660460 TGATACCTACATACAGCAAGTGTG 58.340 41.667 4.86 4.86 44.12 3.82
1975 10197 7.817418 TTTGGACTAGTTAATTTTGTCAGCT 57.183 32.000 0.00 0.00 0.00 4.24
1976 10198 6.801539 TGGACTAGTTAATTTTGTCAGCTG 57.198 37.500 7.63 7.63 0.00 4.24
1977 10199 5.181245 TGGACTAGTTAATTTTGTCAGCTGC 59.819 40.000 9.47 4.92 0.00 5.25
1978 10200 5.392057 GGACTAGTTAATTTTGTCAGCTGCC 60.392 44.000 9.47 0.00 0.00 4.85
1979 10201 3.559238 AGTTAATTTTGTCAGCTGCCG 57.441 42.857 9.47 0.00 0.00 5.69
1980 10202 3.146066 AGTTAATTTTGTCAGCTGCCGA 58.854 40.909 9.47 0.00 0.00 5.54
1981 10203 3.058224 AGTTAATTTTGTCAGCTGCCGAC 60.058 43.478 9.47 9.03 0.00 4.79
1982 10204 0.598065 AATTTTGTCAGCTGCCGACC 59.402 50.000 9.47 0.00 32.15 4.79
1983 10205 0.250901 ATTTTGTCAGCTGCCGACCT 60.251 50.000 9.47 0.00 32.15 3.85
1984 10206 0.884704 TTTTGTCAGCTGCCGACCTC 60.885 55.000 9.47 0.00 32.15 3.85
1985 10207 2.731691 TTTGTCAGCTGCCGACCTCC 62.732 60.000 9.47 0.00 32.15 4.30
1986 10208 3.386237 GTCAGCTGCCGACCTCCT 61.386 66.667 9.47 0.00 0.00 3.69
1987 10209 3.071206 TCAGCTGCCGACCTCCTC 61.071 66.667 9.47 0.00 0.00 3.71
1988 10210 3.385384 CAGCTGCCGACCTCCTCA 61.385 66.667 0.00 0.00 0.00 3.86
1989 10211 2.364842 AGCTGCCGACCTCCTCAT 60.365 61.111 0.00 0.00 0.00 2.90
1990 10212 1.992277 AGCTGCCGACCTCCTCATT 60.992 57.895 0.00 0.00 0.00 2.57
1991 10213 0.687757 AGCTGCCGACCTCCTCATTA 60.688 55.000 0.00 0.00 0.00 1.90
1992 10214 0.394565 GCTGCCGACCTCCTCATTAT 59.605 55.000 0.00 0.00 0.00 1.28
1993 10215 1.618837 GCTGCCGACCTCCTCATTATA 59.381 52.381 0.00 0.00 0.00 0.98
1994 10216 2.234908 GCTGCCGACCTCCTCATTATAT 59.765 50.000 0.00 0.00 0.00 0.86
1995 10217 3.677424 GCTGCCGACCTCCTCATTATATC 60.677 52.174 0.00 0.00 0.00 1.63
1996 10218 3.766591 CTGCCGACCTCCTCATTATATCT 59.233 47.826 0.00 0.00 0.00 1.98
1997 10219 4.160329 TGCCGACCTCCTCATTATATCTT 58.840 43.478 0.00 0.00 0.00 2.40
1998 10220 4.593206 TGCCGACCTCCTCATTATATCTTT 59.407 41.667 0.00 0.00 0.00 2.52
1999 10221 5.778241 TGCCGACCTCCTCATTATATCTTTA 59.222 40.000 0.00 0.00 0.00 1.85
2000 10222 6.100668 GCCGACCTCCTCATTATATCTTTAC 58.899 44.000 0.00 0.00 0.00 2.01
2001 10223 6.631962 CCGACCTCCTCATTATATCTTTACC 58.368 44.000 0.00 0.00 0.00 2.85
2002 10224 6.210784 CCGACCTCCTCATTATATCTTTACCA 59.789 42.308 0.00 0.00 0.00 3.25
2003 10225 7.091443 CGACCTCCTCATTATATCTTTACCAC 58.909 42.308 0.00 0.00 0.00 4.16
2004 10226 6.994221 ACCTCCTCATTATATCTTTACCACG 58.006 40.000 0.00 0.00 0.00 4.94
2005 10227 6.553852 ACCTCCTCATTATATCTTTACCACGT 59.446 38.462 0.00 0.00 0.00 4.49
2008 10230 9.326413 CTCCTCATTATATCTTTACCACGTTTT 57.674 33.333 0.00 0.00 0.00 2.43
2137 10467 9.525409 GAATGATGAGTATTATGCTTGCTTTTT 57.475 29.630 0.00 0.00 0.00 1.94
2218 10555 2.269978 CGGAGAGGGTGTTACCGAA 58.730 57.895 0.00 0.00 45.31 4.30
2461 10933 1.299648 CCTCGCCAAGATCAACCCA 59.700 57.895 0.00 0.00 0.00 4.51
2566 11048 3.625853 TGAAACACAATGTTCAGGGTGA 58.374 40.909 11.58 0.00 40.14 4.02
2571 11053 2.057922 ACAATGTTCAGGGTGACTCCT 58.942 47.619 0.00 0.00 37.71 3.69
2574 11056 3.884037 ATGTTCAGGGTGACTCCTTTT 57.116 42.857 0.00 0.00 34.31 2.27
2594 11084 7.867403 TCCTTTTAGTTGCTGAATTGTCATTTC 59.133 33.333 1.28 1.28 31.85 2.17
2623 11113 2.108250 ACTTGGTGCTACCCTCAATGTT 59.892 45.455 3.33 0.00 37.50 2.71
2701 11194 1.806623 GCTGTGAGTGACGTTCCAAGT 60.807 52.381 0.00 0.00 0.00 3.16
2748 11377 3.470709 GCAGGCTGCAGAGAATTATGTA 58.529 45.455 33.33 0.00 44.26 2.29
2749 11378 3.249559 GCAGGCTGCAGAGAATTATGTAC 59.750 47.826 33.33 0.00 44.26 2.90
2750 11379 4.701765 CAGGCTGCAGAGAATTATGTACT 58.298 43.478 20.43 0.00 0.00 2.73
2751 11380 5.740224 GCAGGCTGCAGAGAATTATGTACTA 60.740 44.000 33.33 0.00 44.26 1.82
2752 11381 5.694006 CAGGCTGCAGAGAATTATGTACTAC 59.306 44.000 20.43 0.00 0.00 2.73
2753 11382 5.363868 AGGCTGCAGAGAATTATGTACTACA 59.636 40.000 20.43 0.00 0.00 2.74
2754 11383 6.042552 AGGCTGCAGAGAATTATGTACTACAT 59.957 38.462 20.43 6.90 42.35 2.29
2755 11384 6.367422 GGCTGCAGAGAATTATGTACTACATC 59.633 42.308 20.43 0.00 39.88 3.06
2756 11385 6.367422 GCTGCAGAGAATTATGTACTACATCC 59.633 42.308 20.43 0.00 39.88 3.51
2757 11386 7.360113 TGCAGAGAATTATGTACTACATCCA 57.640 36.000 4.90 0.00 39.88 3.41
2758 11387 7.210174 TGCAGAGAATTATGTACTACATCCAC 58.790 38.462 4.90 0.00 39.88 4.02
2781 11425 4.263209 CGACTAATTACTGTGTGCTTCTCG 59.737 45.833 0.00 0.00 0.00 4.04
2883 11528 1.751351 CAAGGTACGATCTGCCTCAGA 59.249 52.381 0.00 0.00 44.99 3.27
2888 11533 2.663826 ACGATCTGCCTCAGAGAAAC 57.336 50.000 0.00 0.00 44.08 2.78
3037 11759 1.279271 GTTCATGCCCCTCAGTACACT 59.721 52.381 0.00 0.00 0.00 3.55
3053 11810 2.642139 CACTGCCTGTGCCATAAAAG 57.358 50.000 0.00 0.00 40.06 2.27
3054 11811 1.888512 CACTGCCTGTGCCATAAAAGT 59.111 47.619 0.00 0.00 40.06 2.66
3318 13836 9.956640 AGAGTTTAGACTGAATGATGAAATCTT 57.043 29.630 0.00 0.00 39.38 2.40
3322 13840 9.730705 TTTAGACTGAATGATGAAATCTTCTGT 57.269 29.630 0.00 0.00 45.81 3.41
3610 14141 3.823304 TCATGAGGATGGACGAGTAGATG 59.177 47.826 0.00 0.00 0.00 2.90
3635 14173 6.326375 GTCTCTTATTCATCGTGTGTCTCTT 58.674 40.000 0.00 0.00 0.00 2.85
3673 14341 3.559655 GGTTTGGTCTTTGGTTTCATTGC 59.440 43.478 0.00 0.00 0.00 3.56
3817 14494 7.218228 TCATTCTTGAATGCAGAAAGCTTTA 57.782 32.000 12.68 0.00 45.94 1.85
3818 14495 7.310664 TCATTCTTGAATGCAGAAAGCTTTAG 58.689 34.615 12.68 9.17 45.94 1.85
3819 14496 6.882610 TTCTTGAATGCAGAAAGCTTTAGA 57.117 33.333 12.68 5.06 45.94 2.10
3820 14497 7.458409 TTCTTGAATGCAGAAAGCTTTAGAT 57.542 32.000 12.68 0.00 45.94 1.98
3937 14614 6.820470 TTCAACTTTACAAATTTTCCTGCG 57.180 33.333 0.00 0.00 0.00 5.18
4030 14731 2.604174 CGTCAACAAGGGTGCGTCC 61.604 63.158 0.00 0.00 0.00 4.79
4078 14779 5.548406 AGTAGTAACTCAACTTGCCGAAAT 58.452 37.500 0.00 0.00 0.00 2.17
4079 14780 6.694447 AGTAGTAACTCAACTTGCCGAAATA 58.306 36.000 0.00 0.00 0.00 1.40
4080 14781 5.857822 AGTAACTCAACTTGCCGAAATAC 57.142 39.130 0.00 0.00 0.00 1.89
4084 14785 3.502211 ACTCAACTTGCCGAAATACCTTG 59.498 43.478 0.00 0.00 0.00 3.61
4086 14787 2.817258 CAACTTGCCGAAATACCTTGGA 59.183 45.455 0.00 0.00 0.00 3.53
4087 14788 2.711542 ACTTGCCGAAATACCTTGGAG 58.288 47.619 0.00 0.00 0.00 3.86
4088 14789 2.039879 ACTTGCCGAAATACCTTGGAGT 59.960 45.455 0.00 0.00 0.00 3.85
4089 14790 2.871096 TGCCGAAATACCTTGGAGTT 57.129 45.000 0.00 0.00 0.00 3.01
4090 14791 3.149005 TGCCGAAATACCTTGGAGTTT 57.851 42.857 0.00 0.00 0.00 2.66
4091 14792 3.492337 TGCCGAAATACCTTGGAGTTTT 58.508 40.909 0.00 0.00 0.00 2.43
4092 14793 3.892588 TGCCGAAATACCTTGGAGTTTTT 59.107 39.130 0.00 0.00 0.00 1.94
4191 14895 7.552330 AGCATATAATTTTCCGCCAACAAAAAT 59.448 29.630 0.00 0.00 34.86 1.82
4208 14912 0.888619 AATCCAGCGTCGACTTCAGA 59.111 50.000 14.70 5.86 0.00 3.27
4212 14916 1.069924 CAGCGTCGACTTCAGAGCAG 61.070 60.000 14.70 1.40 0.00 4.24
4221 14925 3.363772 CGACTTCAGAGCAGAAAAAGCAG 60.364 47.826 0.00 0.00 0.00 4.24
4223 14927 4.202441 ACTTCAGAGCAGAAAAAGCAGAA 58.798 39.130 0.00 0.00 0.00 3.02
4225 14929 5.126061 ACTTCAGAGCAGAAAAAGCAGAAAA 59.874 36.000 0.00 0.00 0.00 2.29
4226 14930 5.581126 TCAGAGCAGAAAAAGCAGAAAAA 57.419 34.783 0.00 0.00 0.00 1.94
4228 14932 6.576185 TCAGAGCAGAAAAAGCAGAAAAATT 58.424 32.000 0.00 0.00 0.00 1.82
4230 14934 5.756833 AGAGCAGAAAAAGCAGAAAAATTGG 59.243 36.000 0.00 0.00 0.00 3.16
4231 14935 5.673514 AGCAGAAAAAGCAGAAAAATTGGA 58.326 33.333 0.00 0.00 0.00 3.53
4233 14937 6.259387 AGCAGAAAAAGCAGAAAAATTGGAAG 59.741 34.615 0.00 0.00 0.00 3.46
4234 14938 6.037500 GCAGAAAAAGCAGAAAAATTGGAAGT 59.962 34.615 0.00 0.00 0.00 3.01
4235 14939 7.414429 GCAGAAAAAGCAGAAAAATTGGAAGTT 60.414 33.333 0.00 0.00 0.00 2.66
4237 14941 9.013229 AGAAAAAGCAGAAAAATTGGAAGTTTT 57.987 25.926 0.00 0.00 38.69 2.43
4266 15002 4.023536 GCTTGAAGTCAACGATGGGTTTTA 60.024 41.667 0.00 0.00 36.49 1.52
4267 15003 5.335661 GCTTGAAGTCAACGATGGGTTTTAT 60.336 40.000 0.00 0.00 36.49 1.40
4269 15005 6.007936 TGAAGTCAACGATGGGTTTTATTG 57.992 37.500 0.00 0.00 36.49 1.90
4271 15007 3.192633 AGTCAACGATGGGTTTTATTGGC 59.807 43.478 0.00 0.00 36.49 4.52
4272 15008 2.162608 TCAACGATGGGTTTTATTGGCG 59.837 45.455 0.00 0.00 36.49 5.69
4273 15009 2.116827 ACGATGGGTTTTATTGGCGA 57.883 45.000 0.00 0.00 0.00 5.54
4274 15010 2.438411 ACGATGGGTTTTATTGGCGAA 58.562 42.857 0.00 0.00 0.00 4.70
4275 15011 2.820787 ACGATGGGTTTTATTGGCGAAA 59.179 40.909 0.00 0.00 0.00 3.46
4276 15012 3.256136 ACGATGGGTTTTATTGGCGAAAA 59.744 39.130 0.00 0.00 0.00 2.29
4277 15013 4.238514 CGATGGGTTTTATTGGCGAAAAA 58.761 39.130 0.00 0.00 0.00 1.94
4278 15014 4.867608 CGATGGGTTTTATTGGCGAAAAAT 59.132 37.500 0.00 0.00 0.00 1.82
4279 15015 5.350091 CGATGGGTTTTATTGGCGAAAAATT 59.650 36.000 0.00 0.00 0.00 1.82
4280 15016 6.531948 CGATGGGTTTTATTGGCGAAAAATTA 59.468 34.615 0.00 0.00 0.00 1.40
4281 15017 7.463515 CGATGGGTTTTATTGGCGAAAAATTAC 60.464 37.037 0.00 0.00 0.00 1.89
4282 15018 6.522054 TGGGTTTTATTGGCGAAAAATTACA 58.478 32.000 0.00 0.00 0.00 2.41
4283 15019 7.162082 TGGGTTTTATTGGCGAAAAATTACAT 58.838 30.769 0.00 0.00 0.00 2.29
4284 15020 8.311836 TGGGTTTTATTGGCGAAAAATTACATA 58.688 29.630 0.00 0.00 0.00 2.29
4285 15021 8.813282 GGGTTTTATTGGCGAAAAATTACATAG 58.187 33.333 0.00 0.00 0.00 2.23
4286 15022 9.361315 GGTTTTATTGGCGAAAAATTACATAGT 57.639 29.630 0.00 0.00 0.00 2.12
4292 15028 9.609346 ATTGGCGAAAAATTACATAGTAGTAGT 57.391 29.630 0.00 0.00 0.00 2.73
4293 15029 8.415192 TGGCGAAAAATTACATAGTAGTAGTG 57.585 34.615 0.00 0.00 0.00 2.74
4294 15030 7.010738 TGGCGAAAAATTACATAGTAGTAGTGC 59.989 37.037 0.00 0.00 0.00 4.40
4295 15031 7.010738 GGCGAAAAATTACATAGTAGTAGTGCA 59.989 37.037 0.00 0.00 0.00 4.57
4296 15032 8.385111 GCGAAAAATTACATAGTAGTAGTGCAA 58.615 33.333 0.00 0.00 0.00 4.08
4301 15037 9.953565 AAATTACATAGTAGTAGTGCAAAAGGA 57.046 29.630 0.00 0.00 0.00 3.36
4302 15038 9.953565 AATTACATAGTAGTAGTGCAAAAGGAA 57.046 29.630 0.00 0.00 0.00 3.36
4303 15039 8.997621 TTACATAGTAGTAGTGCAAAAGGAAG 57.002 34.615 0.00 0.00 0.00 3.46
4304 15040 7.005709 ACATAGTAGTAGTGCAAAAGGAAGT 57.994 36.000 0.00 0.00 0.00 3.01
4305 15041 7.097834 ACATAGTAGTAGTGCAAAAGGAAGTC 58.902 38.462 0.00 0.00 0.00 3.01
4306 15042 5.810080 AGTAGTAGTGCAAAAGGAAGTCT 57.190 39.130 0.00 0.00 0.00 3.24
4307 15043 5.542779 AGTAGTAGTGCAAAAGGAAGTCTG 58.457 41.667 0.00 0.00 0.00 3.51
4308 15044 4.689612 AGTAGTGCAAAAGGAAGTCTGA 57.310 40.909 0.00 0.00 0.00 3.27
4309 15045 5.036117 AGTAGTGCAAAAGGAAGTCTGAA 57.964 39.130 0.00 0.00 0.00 3.02
4310 15046 5.437060 AGTAGTGCAAAAGGAAGTCTGAAA 58.563 37.500 0.00 0.00 0.00 2.69
4311 15047 5.885912 AGTAGTGCAAAAGGAAGTCTGAAAA 59.114 36.000 0.00 0.00 0.00 2.29
4312 15048 5.659440 AGTGCAAAAGGAAGTCTGAAAAA 57.341 34.783 0.00 0.00 0.00 1.94
4313 15049 5.410924 AGTGCAAAAGGAAGTCTGAAAAAC 58.589 37.500 0.00 0.00 0.00 2.43
4314 15050 5.185828 AGTGCAAAAGGAAGTCTGAAAAACT 59.814 36.000 0.00 0.00 0.00 2.66
4315 15051 5.869344 GTGCAAAAGGAAGTCTGAAAAACTT 59.131 36.000 0.00 0.00 39.61 2.66
4325 15061 8.972262 GAAGTCTGAAAAACTTCTGAACTTTT 57.028 30.769 8.39 5.56 45.89 2.27
4326 15062 9.411801 GAAGTCTGAAAAACTTCTGAACTTTTT 57.588 29.630 15.60 15.60 45.89 1.94
4379 15118 4.129757 GTGGAACCAAACGTCCGT 57.870 55.556 0.00 0.00 0.00 4.69
4381 15120 2.181521 TGGAACCAAACGTCCGTGC 61.182 57.895 0.00 0.00 0.00 5.34
4395 15134 3.042560 GTGCCCCTCAACTTGCAC 58.957 61.111 0.00 0.00 46.09 4.57
4399 15138 1.003839 CCCCTCAACTTGCACGCTA 60.004 57.895 0.00 0.00 0.00 4.26
4408 15147 4.388773 TCAACTTGCACGCTATACTCAAAG 59.611 41.667 0.00 0.00 0.00 2.77
4446 15185 8.793592 GGTAGGGACAAATGAATATTAACCATC 58.206 37.037 0.00 0.00 0.00 3.51
4469 15208 3.944015 GCTCCAACTTGATCTAATGTGCT 59.056 43.478 0.00 0.00 0.00 4.40
4471 15210 5.007136 GCTCCAACTTGATCTAATGTGCTAC 59.993 44.000 0.00 0.00 0.00 3.58
4477 15216 8.333908 CAACTTGATCTAATGTGCTACATCTTC 58.666 37.037 0.00 0.66 37.97 2.87
4479 15218 5.858381 TGATCTAATGTGCTACATCTTCCC 58.142 41.667 0.00 0.00 37.97 3.97
4485 15224 2.771372 TGTGCTACATCTTCCCATGCTA 59.229 45.455 0.00 0.00 0.00 3.49
4494 15233 3.048600 TCTTCCCATGCTAGTAGGCAAT 58.951 45.455 0.00 0.00 45.68 3.56
4495 15234 4.231273 TCTTCCCATGCTAGTAGGCAATA 58.769 43.478 0.00 0.00 45.68 1.90
4496 15235 4.284490 TCTTCCCATGCTAGTAGGCAATAG 59.716 45.833 0.00 0.00 45.68 1.73
4497 15236 3.587498 TCCCATGCTAGTAGGCAATAGT 58.413 45.455 0.00 0.00 45.68 2.12
4498 15237 4.747583 TCCCATGCTAGTAGGCAATAGTA 58.252 43.478 0.00 0.00 45.68 1.82
4554 15293 6.625960 GCTTCATAGGTCCTCAAACATTTTCC 60.626 42.308 0.00 0.00 0.00 3.13
4563 15313 4.400567 CCTCAAACATTTTCCAGGATCCTC 59.599 45.833 12.69 0.00 0.00 3.71
4575 15325 4.714802 TCCAGGATCCTCGAACTATGAAAA 59.285 41.667 12.69 0.00 0.00 2.29
4580 15330 3.454375 TCCTCGAACTATGAAAATCGGC 58.546 45.455 0.00 0.00 36.05 5.54
4586 15336 5.527214 TCGAACTATGAAAATCGGCATTCAT 59.473 36.000 12.69 12.69 45.54 2.57
4593 15343 1.586422 AATCGGCATTCATGTCCTCG 58.414 50.000 0.00 0.00 0.00 4.63
4596 15346 1.066502 TCGGCATTCATGTCCTCGAAA 60.067 47.619 0.00 0.00 0.00 3.46
4652 15402 2.046023 CGCCATCTGACCAGCCAA 60.046 61.111 0.00 0.00 0.00 4.52
4666 15416 1.985473 AGCCAACTGATGCTGTTGAA 58.015 45.000 15.71 0.00 42.93 2.69
4678 15428 1.069906 GCTGTTGAACCATGACACGTC 60.070 52.381 0.00 0.00 0.00 4.34
4693 15443 0.398098 ACGTCGGATAGGGGGACATT 60.398 55.000 0.00 0.00 0.00 2.71
4722 15472 3.576078 TTGCCATATTGGACCTAGGTG 57.424 47.619 22.10 2.83 40.96 4.00
4723 15473 1.774254 TGCCATATTGGACCTAGGTGG 59.226 52.381 22.10 13.64 40.96 4.61
4727 15477 1.410004 TATTGGACCTAGGTGGCTCG 58.590 55.000 22.10 0.00 40.22 5.03
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 9.878599 CGTTCCATTTGTTTCATATTCCTATAC 57.121 33.333 0.00 0.00 0.00 1.47
20 21 9.621629 ACGTTCCATTTGTTTCATATTCCTATA 57.378 29.630 0.00 0.00 0.00 1.31
21 22 8.519799 ACGTTCCATTTGTTTCATATTCCTAT 57.480 30.769 0.00 0.00 0.00 2.57
22 23 7.931578 ACGTTCCATTTGTTTCATATTCCTA 57.068 32.000 0.00 0.00 0.00 2.94
23 24 6.834168 ACGTTCCATTTGTTTCATATTCCT 57.166 33.333 0.00 0.00 0.00 3.36
24 25 7.596995 TCAAACGTTCCATTTGTTTCATATTCC 59.403 33.333 0.00 0.00 38.08 3.01
25 26 8.514136 TCAAACGTTCCATTTGTTTCATATTC 57.486 30.769 0.00 0.00 38.08 1.75
26 27 8.879342 TTCAAACGTTCCATTTGTTTCATATT 57.121 26.923 0.00 0.00 38.08 1.28
27 28 8.879342 TTTCAAACGTTCCATTTGTTTCATAT 57.121 26.923 0.00 0.00 38.08 1.78
28 29 8.759641 CATTTCAAACGTTCCATTTGTTTCATA 58.240 29.630 0.00 0.00 38.08 2.15
29 30 7.629130 CATTTCAAACGTTCCATTTGTTTCAT 58.371 30.769 0.00 0.00 38.08 2.57
30 31 6.456181 GCATTTCAAACGTTCCATTTGTTTCA 60.456 34.615 0.00 0.00 38.08 2.69
31 32 5.901336 GCATTTCAAACGTTCCATTTGTTTC 59.099 36.000 0.00 0.00 38.08 2.78
32 33 5.352569 TGCATTTCAAACGTTCCATTTGTTT 59.647 32.000 0.00 0.00 38.08 2.83
33 34 4.872691 TGCATTTCAAACGTTCCATTTGTT 59.127 33.333 0.00 0.00 38.08 2.83
34 35 4.437239 TGCATTTCAAACGTTCCATTTGT 58.563 34.783 0.00 0.00 38.08 2.83
35 36 4.084433 CCTGCATTTCAAACGTTCCATTTG 60.084 41.667 0.00 0.00 38.21 2.32
36 37 4.057432 CCTGCATTTCAAACGTTCCATTT 58.943 39.130 0.00 0.00 0.00 2.32
37 38 3.320541 TCCTGCATTTCAAACGTTCCATT 59.679 39.130 0.00 0.00 0.00 3.16
38 39 2.890311 TCCTGCATTTCAAACGTTCCAT 59.110 40.909 0.00 0.00 0.00 3.41
39 40 2.302260 TCCTGCATTTCAAACGTTCCA 58.698 42.857 0.00 0.00 0.00 3.53
40 41 3.049912 GTTCCTGCATTTCAAACGTTCC 58.950 45.455 0.00 0.00 0.00 3.62
41 42 3.730715 CAGTTCCTGCATTTCAAACGTTC 59.269 43.478 0.00 0.00 0.00 3.95
42 43 3.380004 TCAGTTCCTGCATTTCAAACGTT 59.620 39.130 0.00 0.00 0.00 3.99
43 44 2.948979 TCAGTTCCTGCATTTCAAACGT 59.051 40.909 0.00 0.00 0.00 3.99
44 45 3.624326 TCAGTTCCTGCATTTCAAACG 57.376 42.857 0.00 0.00 0.00 3.60
45 46 5.984926 TGATTTCAGTTCCTGCATTTCAAAC 59.015 36.000 0.00 0.00 0.00 2.93
46 47 6.159299 TGATTTCAGTTCCTGCATTTCAAA 57.841 33.333 0.00 0.00 0.00 2.69
47 48 5.787953 TGATTTCAGTTCCTGCATTTCAA 57.212 34.783 0.00 0.00 0.00 2.69
48 49 5.787953 TTGATTTCAGTTCCTGCATTTCA 57.212 34.783 0.00 0.00 0.00 2.69
49 50 5.636543 CCTTTGATTTCAGTTCCTGCATTTC 59.363 40.000 0.00 0.00 0.00 2.17
50 51 5.305128 TCCTTTGATTTCAGTTCCTGCATTT 59.695 36.000 0.00 0.00 0.00 2.32
51 52 4.834496 TCCTTTGATTTCAGTTCCTGCATT 59.166 37.500 0.00 0.00 0.00 3.56
52 53 4.410099 TCCTTTGATTTCAGTTCCTGCAT 58.590 39.130 0.00 0.00 0.00 3.96
53 54 3.831323 TCCTTTGATTTCAGTTCCTGCA 58.169 40.909 0.00 0.00 0.00 4.41
54 55 4.853924 TTCCTTTGATTTCAGTTCCTGC 57.146 40.909 0.00 0.00 0.00 4.85
55 56 5.166398 GCATTCCTTTGATTTCAGTTCCTG 58.834 41.667 0.00 0.00 0.00 3.86
56 57 4.834496 TGCATTCCTTTGATTTCAGTTCCT 59.166 37.500 0.00 0.00 0.00 3.36
57 58 5.138125 TGCATTCCTTTGATTTCAGTTCC 57.862 39.130 0.00 0.00 0.00 3.62
58 59 8.937634 ATAATGCATTCCTTTGATTTCAGTTC 57.062 30.769 16.86 0.00 0.00 3.01
59 60 9.729281 AAATAATGCATTCCTTTGATTTCAGTT 57.271 25.926 16.86 0.00 0.00 3.16
71 72 9.343539 GGTTTCTCTACTAAATAATGCATTCCT 57.656 33.333 16.86 1.50 0.00 3.36
72 73 9.120538 TGGTTTCTCTACTAAATAATGCATTCC 57.879 33.333 16.86 5.49 0.00 3.01
75 76 8.571336 GCATGGTTTCTCTACTAAATAATGCAT 58.429 33.333 0.00 0.00 37.41 3.96
76 77 7.254761 CGCATGGTTTCTCTACTAAATAATGCA 60.255 37.037 13.79 0.00 37.36 3.96
77 78 7.072030 CGCATGGTTTCTCTACTAAATAATGC 58.928 38.462 0.00 0.00 35.88 3.56
78 79 7.041780 AGCGCATGGTTTCTCTACTAAATAATG 60.042 37.037 11.47 0.00 0.00 1.90
79 80 6.992715 AGCGCATGGTTTCTCTACTAAATAAT 59.007 34.615 11.47 0.00 0.00 1.28
80 81 6.257849 CAGCGCATGGTTTCTCTACTAAATAA 59.742 38.462 11.47 0.00 0.00 1.40
81 82 5.753438 CAGCGCATGGTTTCTCTACTAAATA 59.247 40.000 11.47 0.00 0.00 1.40
82 83 4.572389 CAGCGCATGGTTTCTCTACTAAAT 59.428 41.667 11.47 0.00 0.00 1.40
83 84 3.932710 CAGCGCATGGTTTCTCTACTAAA 59.067 43.478 11.47 0.00 0.00 1.85
84 85 3.521560 CAGCGCATGGTTTCTCTACTAA 58.478 45.455 11.47 0.00 0.00 2.24
85 86 2.159099 CCAGCGCATGGTTTCTCTACTA 60.159 50.000 11.47 0.00 44.91 1.82
86 87 1.406069 CCAGCGCATGGTTTCTCTACT 60.406 52.381 11.47 0.00 44.91 2.57
87 88 1.009829 CCAGCGCATGGTTTCTCTAC 58.990 55.000 11.47 0.00 44.91 2.59
88 89 3.458872 CCAGCGCATGGTTTCTCTA 57.541 52.632 11.47 0.00 44.91 2.43
89 90 4.308526 CCAGCGCATGGTTTCTCT 57.691 55.556 11.47 0.00 44.91 3.10
97 98 0.452987 AAGTTGCATACCAGCGCATG 59.547 50.000 11.47 5.50 38.10 4.06
98 99 1.135315 CAAAGTTGCATACCAGCGCAT 60.135 47.619 11.47 0.00 38.10 4.73
99 100 0.240678 CAAAGTTGCATACCAGCGCA 59.759 50.000 11.47 0.00 37.31 6.09
100 101 0.240945 ACAAAGTTGCATACCAGCGC 59.759 50.000 0.00 0.00 37.31 5.92
101 102 1.135689 GGACAAAGTTGCATACCAGCG 60.136 52.381 0.00 0.00 37.31 5.18
102 103 1.202348 GGGACAAAGTTGCATACCAGC 59.798 52.381 0.00 0.00 0.00 4.85
103 104 2.749621 GAGGGACAAAGTTGCATACCAG 59.250 50.000 0.00 0.00 0.00 4.00
104 105 2.375174 AGAGGGACAAAGTTGCATACCA 59.625 45.455 0.00 0.00 0.00 3.25
105 106 3.073274 AGAGGGACAAAGTTGCATACC 57.927 47.619 0.00 0.00 0.00 2.73
106 107 3.366374 GCAAGAGGGACAAAGTTGCATAC 60.366 47.826 0.00 0.00 42.48 2.39
107 108 2.819608 GCAAGAGGGACAAAGTTGCATA 59.180 45.455 0.00 0.00 42.48 3.14
108 109 1.615392 GCAAGAGGGACAAAGTTGCAT 59.385 47.619 0.00 0.00 42.48 3.96
109 110 1.032014 GCAAGAGGGACAAAGTTGCA 58.968 50.000 0.00 0.00 42.48 4.08
110 111 0.315251 GGCAAGAGGGACAAAGTTGC 59.685 55.000 0.00 0.00 42.25 4.17
111 112 1.882623 GAGGCAAGAGGGACAAAGTTG 59.117 52.381 0.00 0.00 0.00 3.16
112 113 1.543429 CGAGGCAAGAGGGACAAAGTT 60.543 52.381 0.00 0.00 0.00 2.66
113 114 0.035458 CGAGGCAAGAGGGACAAAGT 59.965 55.000 0.00 0.00 0.00 2.66
114 115 0.674895 CCGAGGCAAGAGGGACAAAG 60.675 60.000 0.00 0.00 0.00 2.77
115 116 1.374947 CCGAGGCAAGAGGGACAAA 59.625 57.895 0.00 0.00 0.00 2.83
116 117 1.827399 GACCGAGGCAAGAGGGACAA 61.827 60.000 0.00 0.00 0.00 3.18
117 118 2.203788 ACCGAGGCAAGAGGGACA 60.204 61.111 0.00 0.00 0.00 4.02
118 119 1.545706 AAGACCGAGGCAAGAGGGAC 61.546 60.000 0.00 0.00 0.00 4.46
119 120 0.836400 AAAGACCGAGGCAAGAGGGA 60.836 55.000 0.00 0.00 0.00 4.20
120 121 0.674895 CAAAGACCGAGGCAAGAGGG 60.675 60.000 0.00 0.00 0.00 4.30
121 122 0.035458 ACAAAGACCGAGGCAAGAGG 59.965 55.000 0.00 0.00 0.00 3.69
122 123 1.151668 CACAAAGACCGAGGCAAGAG 58.848 55.000 0.00 0.00 0.00 2.85
123 124 0.468226 ACACAAAGACCGAGGCAAGA 59.532 50.000 0.00 0.00 0.00 3.02
124 125 2.163818 TACACAAAGACCGAGGCAAG 57.836 50.000 0.00 0.00 0.00 4.01
125 126 2.623878 TTACACAAAGACCGAGGCAA 57.376 45.000 0.00 0.00 0.00 4.52
126 127 2.623878 TTTACACAAAGACCGAGGCA 57.376 45.000 0.00 0.00 0.00 4.75
127 128 3.974871 TTTTTACACAAAGACCGAGGC 57.025 42.857 0.00 0.00 0.00 4.70
144 145 6.603201 TGAAACATTGAGTCAGACCTCTTTTT 59.397 34.615 0.00 0.00 32.50 1.94
145 146 6.038714 GTGAAACATTGAGTCAGACCTCTTTT 59.961 38.462 0.00 0.00 36.32 2.27
146 147 5.529060 GTGAAACATTGAGTCAGACCTCTTT 59.471 40.000 0.00 0.00 36.32 2.52
147 148 5.059833 GTGAAACATTGAGTCAGACCTCTT 58.940 41.667 0.00 0.00 36.32 2.85
148 149 4.346418 AGTGAAACATTGAGTCAGACCTCT 59.654 41.667 0.00 0.00 41.43 3.69
149 150 4.636249 AGTGAAACATTGAGTCAGACCTC 58.364 43.478 0.00 0.00 41.43 3.85
150 151 4.696479 AGTGAAACATTGAGTCAGACCT 57.304 40.909 0.00 0.00 41.43 3.85
151 152 4.816385 TGAAGTGAAACATTGAGTCAGACC 59.184 41.667 0.00 0.00 41.43 3.85
152 153 5.991328 TGAAGTGAAACATTGAGTCAGAC 57.009 39.130 0.00 0.00 41.43 3.51
153 154 5.049198 GCATGAAGTGAAACATTGAGTCAGA 60.049 40.000 0.00 0.00 41.43 3.27
154 155 5.152097 GCATGAAGTGAAACATTGAGTCAG 58.848 41.667 0.00 0.00 41.43 3.51
155 156 4.319694 CGCATGAAGTGAAACATTGAGTCA 60.320 41.667 0.00 0.00 41.43 3.41
156 157 4.083855 TCGCATGAAGTGAAACATTGAGTC 60.084 41.667 0.00 0.00 41.43 3.36
157 158 3.814842 TCGCATGAAGTGAAACATTGAGT 59.185 39.130 0.00 0.00 41.43 3.41
158 159 4.408993 TCGCATGAAGTGAAACATTGAG 57.591 40.909 0.00 0.00 41.43 3.02
159 160 4.827304 TTCGCATGAAGTGAAACATTGA 57.173 36.364 0.00 0.00 43.36 2.57
166 167 3.189080 CCTGTGATTTCGCATGAAGTGAA 59.811 43.478 0.00 0.00 44.55 3.18
167 168 2.743664 CCTGTGATTTCGCATGAAGTGA 59.256 45.455 0.00 0.00 35.06 3.41
168 169 2.743664 TCCTGTGATTTCGCATGAAGTG 59.256 45.455 0.00 0.00 35.06 3.16
169 170 3.057969 TCCTGTGATTTCGCATGAAGT 57.942 42.857 0.00 0.00 35.06 3.01
170 171 4.161333 GTTTCCTGTGATTTCGCATGAAG 58.839 43.478 0.00 0.00 40.31 3.02
171 172 3.057596 GGTTTCCTGTGATTTCGCATGAA 60.058 43.478 0.00 7.47 38.55 2.57
172 173 2.487762 GGTTTCCTGTGATTTCGCATGA 59.512 45.455 0.00 0.00 35.63 3.07
173 174 2.228582 TGGTTTCCTGTGATTTCGCATG 59.771 45.455 0.00 0.00 35.63 4.06
174 175 2.513753 TGGTTTCCTGTGATTTCGCAT 58.486 42.857 0.00 0.00 35.63 4.73
175 176 1.974265 TGGTTTCCTGTGATTTCGCA 58.026 45.000 0.00 0.00 34.84 5.10
176 177 2.034053 TGTTGGTTTCCTGTGATTTCGC 59.966 45.455 0.00 0.00 0.00 4.70
177 178 3.315191 ACTGTTGGTTTCCTGTGATTTCG 59.685 43.478 0.00 0.00 0.00 3.46
178 179 4.097892 ACACTGTTGGTTTCCTGTGATTTC 59.902 41.667 0.00 0.00 0.00 2.17
179 180 4.023291 ACACTGTTGGTTTCCTGTGATTT 58.977 39.130 0.00 0.00 0.00 2.17
180 181 3.631250 ACACTGTTGGTTTCCTGTGATT 58.369 40.909 0.00 0.00 0.00 2.57
181 182 3.297134 ACACTGTTGGTTTCCTGTGAT 57.703 42.857 0.00 0.00 0.00 3.06
182 183 2.799126 ACACTGTTGGTTTCCTGTGA 57.201 45.000 0.00 0.00 0.00 3.58
183 184 3.769536 GAAACACTGTTGGTTTCCTGTG 58.230 45.455 10.88 0.00 45.17 3.66
189 190 3.963129 TCCAGAGAAACACTGTTGGTTT 58.037 40.909 0.00 0.00 40.91 3.27
190 191 3.644966 TCCAGAGAAACACTGTTGGTT 57.355 42.857 0.00 0.00 34.33 3.67
191 192 3.864789 ATCCAGAGAAACACTGTTGGT 57.135 42.857 0.00 0.00 33.94 3.67
192 193 3.304928 GCAATCCAGAGAAACACTGTTGG 60.305 47.826 0.00 0.00 34.04 3.77
193 194 3.316029 TGCAATCCAGAGAAACACTGTTG 59.684 43.478 0.00 0.00 34.04 3.33
194 195 3.554934 TGCAATCCAGAGAAACACTGTT 58.445 40.909 0.00 0.00 34.04 3.16
195 196 3.213206 TGCAATCCAGAGAAACACTGT 57.787 42.857 0.00 0.00 34.04 3.55
196 197 3.316029 TGTTGCAATCCAGAGAAACACTG 59.684 43.478 0.59 0.00 35.43 3.66
197 198 3.554934 TGTTGCAATCCAGAGAAACACT 58.445 40.909 0.59 0.00 0.00 3.55
198 199 3.316308 ACTGTTGCAATCCAGAGAAACAC 59.684 43.478 20.45 0.00 32.93 3.32
199 200 3.554934 ACTGTTGCAATCCAGAGAAACA 58.445 40.909 20.45 2.60 32.93 2.83
200 201 5.886960 ATACTGTTGCAATCCAGAGAAAC 57.113 39.130 20.45 0.00 32.93 2.78
201 202 5.415701 GGAATACTGTTGCAATCCAGAGAAA 59.584 40.000 20.45 6.42 32.93 2.52
202 203 4.943705 GGAATACTGTTGCAATCCAGAGAA 59.056 41.667 20.45 8.39 32.93 2.87
203 204 4.225942 AGGAATACTGTTGCAATCCAGAGA 59.774 41.667 20.45 10.24 32.93 3.10
204 205 4.521146 AGGAATACTGTTGCAATCCAGAG 58.479 43.478 20.45 1.65 32.93 3.35
205 206 4.517285 GAGGAATACTGTTGCAATCCAGA 58.483 43.478 20.45 7.56 32.93 3.86
206 207 3.629398 GGAGGAATACTGTTGCAATCCAG 59.371 47.826 15.13 14.50 34.82 3.86
207 208 3.010027 TGGAGGAATACTGTTGCAATCCA 59.990 43.478 15.13 11.78 32.10 3.41
208 209 3.620488 TGGAGGAATACTGTTGCAATCC 58.380 45.455 0.59 4.18 0.00 3.01
209 210 6.058183 AGTATGGAGGAATACTGTTGCAATC 58.942 40.000 0.59 0.00 40.95 2.67
210 211 6.006275 AGTATGGAGGAATACTGTTGCAAT 57.994 37.500 0.59 0.00 40.95 3.56
211 212 5.435686 AGTATGGAGGAATACTGTTGCAA 57.564 39.130 0.00 0.00 40.95 4.08
212 213 5.185454 CAAGTATGGAGGAATACTGTTGCA 58.815 41.667 0.00 0.00 41.49 4.08
213 214 5.186198 ACAAGTATGGAGGAATACTGTTGC 58.814 41.667 0.00 0.00 41.49 4.17
214 215 6.316390 GGAACAAGTATGGAGGAATACTGTTG 59.684 42.308 12.57 6.02 41.49 3.33
215 216 6.215636 AGGAACAAGTATGGAGGAATACTGTT 59.784 38.462 0.00 5.25 41.49 3.16
216 217 5.726793 AGGAACAAGTATGGAGGAATACTGT 59.273 40.000 0.00 0.00 41.49 3.55
217 218 6.051717 CAGGAACAAGTATGGAGGAATACTG 58.948 44.000 0.00 0.00 41.49 2.74
218 219 5.396884 GCAGGAACAAGTATGGAGGAATACT 60.397 44.000 0.00 0.00 43.66 2.12
219 220 4.816925 GCAGGAACAAGTATGGAGGAATAC 59.183 45.833 0.00 0.00 33.90 1.89
220 221 4.473196 TGCAGGAACAAGTATGGAGGAATA 59.527 41.667 0.00 0.00 0.00 1.75
221 222 3.266772 TGCAGGAACAAGTATGGAGGAAT 59.733 43.478 0.00 0.00 0.00 3.01
222 223 2.642311 TGCAGGAACAAGTATGGAGGAA 59.358 45.455 0.00 0.00 0.00 3.36
223 224 2.265367 TGCAGGAACAAGTATGGAGGA 58.735 47.619 0.00 0.00 0.00 3.71
224 225 2.787473 TGCAGGAACAAGTATGGAGG 57.213 50.000 0.00 0.00 0.00 4.30
225 226 4.701651 TGATTTGCAGGAACAAGTATGGAG 59.298 41.667 0.00 0.00 0.00 3.86
226 227 4.661222 TGATTTGCAGGAACAAGTATGGA 58.339 39.130 0.00 0.00 0.00 3.41
227 228 5.389859 TTGATTTGCAGGAACAAGTATGG 57.610 39.130 0.00 0.00 0.00 2.74
228 229 6.215121 TGTTTGATTTGCAGGAACAAGTATG 58.785 36.000 0.00 0.00 27.37 2.39
229 230 6.403866 TGTTTGATTTGCAGGAACAAGTAT 57.596 33.333 0.00 0.00 27.37 2.12
230 231 5.843673 TGTTTGATTTGCAGGAACAAGTA 57.156 34.783 0.00 0.00 27.37 2.24
231 232 4.734398 TGTTTGATTTGCAGGAACAAGT 57.266 36.364 0.00 0.00 27.37 3.16
232 233 4.383649 CGATGTTTGATTTGCAGGAACAAG 59.616 41.667 6.54 2.54 32.63 3.16
233 234 4.297510 CGATGTTTGATTTGCAGGAACAA 58.702 39.130 6.54 0.34 32.63 2.83
234 235 3.856638 GCGATGTTTGATTTGCAGGAACA 60.857 43.478 0.00 0.00 33.21 3.18
235 236 2.663119 GCGATGTTTGATTTGCAGGAAC 59.337 45.455 0.00 0.00 0.00 3.62
236 237 2.557924 AGCGATGTTTGATTTGCAGGAA 59.442 40.909 0.00 0.00 0.00 3.36
237 238 2.161855 AGCGATGTTTGATTTGCAGGA 58.838 42.857 0.00 0.00 0.00 3.86
238 239 2.642139 AGCGATGTTTGATTTGCAGG 57.358 45.000 0.00 0.00 0.00 4.85
239 240 4.082274 TGTAGCGATGTTTGATTTGCAG 57.918 40.909 0.00 0.00 0.00 4.41
240 241 3.501828 ACTGTAGCGATGTTTGATTTGCA 59.498 39.130 0.00 0.00 0.00 4.08
241 242 4.083581 ACTGTAGCGATGTTTGATTTGC 57.916 40.909 0.00 0.00 0.00 3.68
242 243 5.258622 GCTACTGTAGCGATGTTTGATTTG 58.741 41.667 22.60 0.00 42.62 2.32
243 244 5.470845 GCTACTGTAGCGATGTTTGATTT 57.529 39.130 22.60 0.00 42.62 2.17
256 257 7.445121 TCATTCCATAGGATTTGCTACTGTAG 58.555 38.462 10.48 10.48 0.00 2.74
257 258 7.290014 TCTCATTCCATAGGATTTGCTACTGTA 59.710 37.037 0.00 0.00 0.00 2.74
258 259 6.100279 TCTCATTCCATAGGATTTGCTACTGT 59.900 38.462 0.00 0.00 0.00 3.55
259 260 6.528321 TCTCATTCCATAGGATTTGCTACTG 58.472 40.000 0.00 0.00 0.00 2.74
260 261 6.753913 TCTCATTCCATAGGATTTGCTACT 57.246 37.500 0.00 0.00 0.00 2.57
261 262 7.992754 ATTCTCATTCCATAGGATTTGCTAC 57.007 36.000 0.00 0.00 0.00 3.58
262 263 8.627208 GAATTCTCATTCCATAGGATTTGCTA 57.373 34.615 0.00 0.00 33.74 3.49
263 264 7.521871 GAATTCTCATTCCATAGGATTTGCT 57.478 36.000 0.00 0.00 33.74 3.91
276 277 4.859245 GGAAAAACGCAGGAATTCTCATTC 59.141 41.667 5.23 0.36 38.54 2.67
277 278 4.524328 AGGAAAAACGCAGGAATTCTCATT 59.476 37.500 5.23 0.00 0.00 2.57
278 279 4.082125 AGGAAAAACGCAGGAATTCTCAT 58.918 39.130 5.23 0.00 0.00 2.90
279 280 3.486383 AGGAAAAACGCAGGAATTCTCA 58.514 40.909 5.23 0.00 0.00 3.27
280 281 5.354234 TCATAGGAAAAACGCAGGAATTCTC 59.646 40.000 5.23 0.00 0.00 2.87
281 282 5.253330 TCATAGGAAAAACGCAGGAATTCT 58.747 37.500 5.23 0.00 0.00 2.40
282 283 5.560966 TCATAGGAAAAACGCAGGAATTC 57.439 39.130 0.00 0.00 0.00 2.17
283 284 5.975693 TTCATAGGAAAAACGCAGGAATT 57.024 34.783 0.00 0.00 0.00 2.17
284 285 5.975693 TTTCATAGGAAAAACGCAGGAAT 57.024 34.783 0.00 0.00 39.96 3.01
285 286 5.776173 TTTTCATAGGAAAAACGCAGGAA 57.224 34.783 12.58 0.00 46.91 3.36
298 299 9.374838 CCTTTGATTTGAAGGATTTTTCATAGG 57.625 33.333 0.00 0.00 45.25 2.57
310 311 2.757314 GAGGCCTCCTTTGATTTGAAGG 59.243 50.000 23.19 0.00 44.06 3.46
311 312 3.192212 GTGAGGCCTCCTTTGATTTGAAG 59.808 47.826 29.95 0.00 31.76 3.02
312 313 3.157087 GTGAGGCCTCCTTTGATTTGAA 58.843 45.455 29.95 3.38 31.76 2.69
313 314 2.108075 TGTGAGGCCTCCTTTGATTTGA 59.892 45.455 29.95 3.96 31.76 2.69
314 315 2.517959 TGTGAGGCCTCCTTTGATTTG 58.482 47.619 29.95 0.00 31.76 2.32
315 316 2.978156 TGTGAGGCCTCCTTTGATTT 57.022 45.000 29.95 0.00 31.76 2.17
316 317 3.463048 AATGTGAGGCCTCCTTTGATT 57.537 42.857 29.95 16.18 31.76 2.57
317 318 3.463048 AAATGTGAGGCCTCCTTTGAT 57.537 42.857 29.95 11.27 31.76 2.57
318 319 2.978156 AAATGTGAGGCCTCCTTTGA 57.022 45.000 29.95 8.09 31.76 2.69
383 385 8.535335 AGATTCACAAGTCTACATAGAATGTGT 58.465 33.333 22.72 12.95 44.43 3.72
394 1938 4.158025 TCTCCGGAAGATTCACAAGTCTAC 59.842 45.833 5.23 0.00 0.00 2.59
412 1956 4.720649 TCCTGTTCTATTGTTCTCTCCG 57.279 45.455 0.00 0.00 0.00 4.63
430 1974 1.005569 TGACCTGTCTGTCGGTATCCT 59.994 52.381 0.00 0.00 38.11 3.24
432 1976 1.202313 GCTGACCTGTCTGTCGGTATC 60.202 57.143 6.13 0.00 42.48 2.24
434 1978 1.248785 GGCTGACCTGTCTGTCGGTA 61.249 60.000 6.13 0.00 42.48 4.02
592 2149 3.608474 GCACCGTCGTTTTGCTAGAAATT 60.608 43.478 0.00 0.00 33.26 1.82
655 2212 2.350197 CGAGAAAACCAGCTGCTGAAAG 60.350 50.000 30.10 16.13 32.44 2.62
659 2219 0.886490 ACCGAGAAAACCAGCTGCTG 60.886 55.000 22.44 22.44 0.00 4.41
660 2220 0.603975 GACCGAGAAAACCAGCTGCT 60.604 55.000 8.66 0.00 0.00 4.24
893 2483 5.118286 AGGGAAAGAAGTTGCATTGTTTTG 58.882 37.500 0.00 0.00 0.00 2.44
962 2552 5.331069 AGCCGTGTATATATAGTCCTGGTT 58.669 41.667 0.00 0.00 0.00 3.67
1018 2618 2.253758 TGCTCTGCAGTTCGTTGGC 61.254 57.895 14.67 8.36 33.32 4.52
1032 2633 1.066914 CTCTGTCGCTGTTTCTGCTC 58.933 55.000 0.00 0.00 0.00 4.26
1143 2759 2.615912 AGCTGCTCTGTCAGAAACAAAC 59.384 45.455 3.67 1.54 37.45 2.93
1144 2760 2.923121 AGCTGCTCTGTCAGAAACAAA 58.077 42.857 3.67 0.00 37.45 2.83
1145 2761 2.627515 AGCTGCTCTGTCAGAAACAA 57.372 45.000 3.67 0.00 37.45 2.83
1146 2762 2.630098 ACTAGCTGCTCTGTCAGAAACA 59.370 45.455 4.91 4.68 36.19 2.83
1155 2771 4.120792 TCAGATGAAACTAGCTGCTCTG 57.879 45.455 4.91 5.14 0.00 3.35
1158 2774 5.942236 TCAAAATCAGATGAAACTAGCTGCT 59.058 36.000 7.57 7.57 0.00 4.24
1194 2825 4.712476 CAATTTAGATCTCCACCCTCCAG 58.288 47.826 0.00 0.00 0.00 3.86
1217 2860 1.517694 GCCGCTGCAATCAACCATG 60.518 57.895 0.00 0.00 37.47 3.66
1404 3072 0.612732 TTCGTCACCATACCCGTCCT 60.613 55.000 0.00 0.00 0.00 3.85
1420 3099 1.660607 CCATTGATCCACGTGTCTTCG 59.339 52.381 15.65 0.00 0.00 3.79
1421 3100 2.972625 TCCATTGATCCACGTGTCTTC 58.027 47.619 15.65 8.59 0.00 2.87
1570 6140 4.104383 AGATTCCTCCAAGCAACAAAGA 57.896 40.909 0.00 0.00 0.00 2.52
1847 6451 7.408756 TTTATCCCATGGCAATAAGATATGC 57.591 36.000 6.09 0.00 41.82 3.14
1911 8310 3.259207 CACTTTACAGTGTGAGCTTGC 57.741 47.619 5.88 0.00 44.96 4.01
1969 10191 3.363844 GAGGAGGTCGGCAGCTGAC 62.364 68.421 24.36 24.36 38.88 3.51
1975 10197 3.779444 AGATATAATGAGGAGGTCGGCA 58.221 45.455 0.00 0.00 0.00 5.69
1976 10198 4.810191 AAGATATAATGAGGAGGTCGGC 57.190 45.455 0.00 0.00 0.00 5.54
1977 10199 6.210784 TGGTAAAGATATAATGAGGAGGTCGG 59.789 42.308 0.00 0.00 0.00 4.79
1978 10200 7.091443 GTGGTAAAGATATAATGAGGAGGTCG 58.909 42.308 0.00 0.00 0.00 4.79
1979 10201 7.091443 CGTGGTAAAGATATAATGAGGAGGTC 58.909 42.308 0.00 0.00 0.00 3.85
1980 10202 6.553852 ACGTGGTAAAGATATAATGAGGAGGT 59.446 38.462 0.00 0.00 0.00 3.85
1981 10203 6.994221 ACGTGGTAAAGATATAATGAGGAGG 58.006 40.000 0.00 0.00 0.00 4.30
1982 10204 8.888579 AAACGTGGTAAAGATATAATGAGGAG 57.111 34.615 0.00 0.00 0.00 3.69
1983 10205 9.675464 AAAAACGTGGTAAAGATATAATGAGGA 57.325 29.630 0.00 0.00 0.00 3.71
1984 10206 9.716507 CAAAAACGTGGTAAAGATATAATGAGG 57.283 33.333 0.00 0.00 0.00 3.86
1989 10211 8.231837 GCTGACAAAAACGTGGTAAAGATATAA 58.768 33.333 0.00 0.00 0.00 0.98
1990 10212 7.604927 AGCTGACAAAAACGTGGTAAAGATATA 59.395 33.333 0.00 0.00 0.00 0.86
1991 10213 6.430000 AGCTGACAAAAACGTGGTAAAGATAT 59.570 34.615 0.00 0.00 0.00 1.63
1992 10214 5.761234 AGCTGACAAAAACGTGGTAAAGATA 59.239 36.000 0.00 0.00 0.00 1.98
1993 10215 4.578928 AGCTGACAAAAACGTGGTAAAGAT 59.421 37.500 0.00 0.00 0.00 2.40
1994 10216 3.942748 AGCTGACAAAAACGTGGTAAAGA 59.057 39.130 0.00 0.00 0.00 2.52
1995 10217 4.035017 CAGCTGACAAAAACGTGGTAAAG 58.965 43.478 8.42 0.00 0.00 1.85
1996 10218 3.732471 GCAGCTGACAAAAACGTGGTAAA 60.732 43.478 20.43 0.00 0.00 2.01
1997 10219 2.223386 GCAGCTGACAAAAACGTGGTAA 60.223 45.455 20.43 0.00 0.00 2.85
1998 10220 1.332375 GCAGCTGACAAAAACGTGGTA 59.668 47.619 20.43 0.00 0.00 3.25
1999 10221 0.100503 GCAGCTGACAAAAACGTGGT 59.899 50.000 20.43 0.00 0.00 4.16
2000 10222 0.594796 GGCAGCTGACAAAAACGTGG 60.595 55.000 20.43 0.00 0.00 4.94
2001 10223 0.929824 CGGCAGCTGACAAAAACGTG 60.930 55.000 22.03 0.00 0.00 4.49
2002 10224 1.092921 TCGGCAGCTGACAAAAACGT 61.093 50.000 22.03 0.00 0.00 3.99
2003 10225 0.657368 GTCGGCAGCTGACAAAAACG 60.657 55.000 26.87 10.31 39.36 3.60
2004 10226 0.317854 GGTCGGCAGCTGACAAAAAC 60.318 55.000 31.23 13.24 41.15 2.43
2005 10227 0.465460 AGGTCGGCAGCTGACAAAAA 60.465 50.000 31.23 0.00 41.15 1.94
2008 10230 2.343758 GAGGTCGGCAGCTGACAA 59.656 61.111 31.23 0.00 41.15 3.18
2302 10642 1.857965 TGATCCTGAGGAGGTCACAG 58.142 55.000 7.50 0.00 40.76 3.66
2461 10933 2.754664 CTTTGTCAAGGGGCGCCTCT 62.755 60.000 27.30 27.30 0.00 3.69
2566 11048 5.827797 TGACAATTCAGCAACTAAAAGGAGT 59.172 36.000 0.00 0.00 0.00 3.85
2571 11053 7.652909 CAGGAAATGACAATTCAGCAACTAAAA 59.347 33.333 5.64 0.00 34.35 1.52
2574 11056 5.335897 GCAGGAAATGACAATTCAGCAACTA 60.336 40.000 12.42 0.00 34.35 2.24
2594 11084 0.674895 GTAGCACCAAGTCCTGCAGG 60.675 60.000 27.87 27.87 35.73 4.85
2623 11113 1.065851 GAACCCTTTTTCGGTTTCGCA 59.934 47.619 0.00 0.00 43.75 5.10
2748 11377 6.152323 ACACAGTAATTAGTCGTGGATGTAGT 59.848 38.462 18.71 0.00 31.83 2.73
2749 11378 6.472486 CACACAGTAATTAGTCGTGGATGTAG 59.528 42.308 18.71 0.00 31.83 2.74
2750 11379 6.327154 CACACAGTAATTAGTCGTGGATGTA 58.673 40.000 18.71 0.00 31.83 2.29
2751 11380 5.168569 CACACAGTAATTAGTCGTGGATGT 58.831 41.667 18.71 5.21 31.83 3.06
2752 11381 4.032900 GCACACAGTAATTAGTCGTGGATG 59.967 45.833 18.71 13.18 31.83 3.51
2753 11382 4.081642 AGCACACAGTAATTAGTCGTGGAT 60.082 41.667 18.71 9.70 31.83 3.41
2754 11383 3.257375 AGCACACAGTAATTAGTCGTGGA 59.743 43.478 18.71 0.00 31.83 4.02
2755 11384 3.585862 AGCACACAGTAATTAGTCGTGG 58.414 45.455 18.71 12.50 31.83 4.94
2756 11385 4.923871 AGAAGCACACAGTAATTAGTCGTG 59.076 41.667 15.49 15.49 0.00 4.35
2757 11386 5.135508 AGAAGCACACAGTAATTAGTCGT 57.864 39.130 0.00 0.00 0.00 4.34
2758 11387 4.263209 CGAGAAGCACACAGTAATTAGTCG 59.737 45.833 0.00 0.00 0.00 4.18
2781 11425 0.959553 CTTCCATGGCCTGATCATGC 59.040 55.000 13.99 13.99 40.29 4.06
2936 11653 9.601971 CAAATTTCTTGGCTGAAAAATAATGTG 57.398 29.630 9.48 0.00 39.08 3.21
3037 11759 6.435904 AGTTTTATACTTTTATGGCACAGGCA 59.564 34.615 0.00 0.00 35.65 4.75
3051 11808 9.950680 CAACATTGAACAGTGAGTTTTATACTT 57.049 29.630 0.00 0.00 41.51 2.24
3052 11809 8.076178 GCAACATTGAACAGTGAGTTTTATACT 58.924 33.333 0.00 0.00 41.51 2.12
3053 11810 8.076178 AGCAACATTGAACAGTGAGTTTTATAC 58.924 33.333 0.00 0.00 41.51 1.47
3054 11811 8.165239 AGCAACATTGAACAGTGAGTTTTATA 57.835 30.769 0.00 0.00 41.51 0.98
3124 11881 1.526917 GTGGCCAGTGCACTCAACT 60.527 57.895 18.64 0.00 40.13 3.16
3583 14114 0.460109 CGTCCATCCTCATGACGCAA 60.460 55.000 0.00 0.00 31.44 4.85
3610 14141 5.000012 AGACACACGATGAATAAGAGACC 58.000 43.478 0.00 0.00 0.00 3.85
3635 14173 4.217983 ACCAAACCGTGAACACTAAAACAA 59.782 37.500 3.51 0.00 0.00 2.83
3913 14590 7.009723 GTCGCAGGAAAATTTGTAAAGTTGAAA 59.990 33.333 0.00 0.00 0.00 2.69
3914 14591 6.474102 GTCGCAGGAAAATTTGTAAAGTTGAA 59.526 34.615 0.00 0.00 0.00 2.69
3915 14592 5.974751 GTCGCAGGAAAATTTGTAAAGTTGA 59.025 36.000 0.00 0.00 0.00 3.18
3922 14599 4.920640 TTTGGTCGCAGGAAAATTTGTA 57.079 36.364 0.00 0.00 0.00 2.41
3937 14614 4.451096 TCAAGAACAGCGACTTATTTGGTC 59.549 41.667 0.00 0.00 0.00 4.02
3952 14629 0.843309 TGGAAGGGCTGTCAAGAACA 59.157 50.000 0.00 0.00 36.18 3.18
3953 14630 2.087646 GATGGAAGGGCTGTCAAGAAC 58.912 52.381 0.00 0.00 0.00 3.01
3954 14631 1.704628 TGATGGAAGGGCTGTCAAGAA 59.295 47.619 0.00 0.00 0.00 2.52
3985 14686 1.271856 TCACTCCGGCACTATCCAAA 58.728 50.000 0.00 0.00 0.00 3.28
3987 14688 1.412710 GAATCACTCCGGCACTATCCA 59.587 52.381 0.00 0.00 0.00 3.41
4030 14731 4.771590 TGGCTTTACTTCATGCAAAGAG 57.228 40.909 5.15 0.00 32.19 2.85
4143 14847 6.036470 GCTAGTGCAAAAGAAAGTCAAGTTT 58.964 36.000 0.00 0.00 39.41 2.66
4191 14895 1.876664 CTCTGAAGTCGACGCTGGA 59.123 57.895 10.46 7.00 0.00 3.86
4208 14912 5.673514 TCCAATTTTTCTGCTTTTTCTGCT 58.326 33.333 0.00 0.00 0.00 4.24
4212 14916 9.624697 AAAAACTTCCAATTTTTCTGCTTTTTC 57.375 25.926 0.00 0.00 34.89 2.29
4237 14941 4.358851 CATCGTTGACTTCAAGCCAAAAA 58.641 39.130 0.00 0.00 36.39 1.94
4242 14978 0.804989 CCCATCGTTGACTTCAAGCC 59.195 55.000 0.00 0.00 36.39 4.35
4244 14980 4.568152 AAAACCCATCGTTGACTTCAAG 57.432 40.909 0.00 0.00 36.39 3.02
4248 14984 4.321675 GCCAATAAAACCCATCGTTGACTT 60.322 41.667 0.00 0.00 33.93 3.01
4249 14985 3.192633 GCCAATAAAACCCATCGTTGACT 59.807 43.478 0.00 0.00 33.93 3.41
4250 14986 3.507786 GCCAATAAAACCCATCGTTGAC 58.492 45.455 0.00 0.00 33.93 3.18
4251 14987 2.162608 CGCCAATAAAACCCATCGTTGA 59.837 45.455 0.00 0.00 33.93 3.18
4257 14993 7.162082 TGTAATTTTTCGCCAATAAAACCCAT 58.838 30.769 0.00 0.00 0.00 4.00
4266 15002 9.609346 ACTACTACTATGTAATTTTTCGCCAAT 57.391 29.630 0.00 0.00 0.00 3.16
4267 15003 8.875803 CACTACTACTATGTAATTTTTCGCCAA 58.124 33.333 0.00 0.00 0.00 4.52
4269 15005 7.010738 TGCACTACTACTATGTAATTTTTCGCC 59.989 37.037 0.00 0.00 0.00 5.54
4275 15011 9.953565 TCCTTTTGCACTACTACTATGTAATTT 57.046 29.630 0.00 0.00 0.00 1.82
4276 15012 9.953565 TTCCTTTTGCACTACTACTATGTAATT 57.046 29.630 0.00 0.00 0.00 1.40
4277 15013 9.601217 CTTCCTTTTGCACTACTACTATGTAAT 57.399 33.333 0.00 0.00 0.00 1.89
4278 15014 8.591072 ACTTCCTTTTGCACTACTACTATGTAA 58.409 33.333 0.00 0.00 0.00 2.41
4279 15015 8.130671 ACTTCCTTTTGCACTACTACTATGTA 57.869 34.615 0.00 0.00 0.00 2.29
4280 15016 7.005709 ACTTCCTTTTGCACTACTACTATGT 57.994 36.000 0.00 0.00 0.00 2.29
4281 15017 7.276658 CAGACTTCCTTTTGCACTACTACTATG 59.723 40.741 0.00 0.00 0.00 2.23
4282 15018 7.178628 TCAGACTTCCTTTTGCACTACTACTAT 59.821 37.037 0.00 0.00 0.00 2.12
4283 15019 6.492429 TCAGACTTCCTTTTGCACTACTACTA 59.508 38.462 0.00 0.00 0.00 1.82
4284 15020 5.304614 TCAGACTTCCTTTTGCACTACTACT 59.695 40.000 0.00 0.00 0.00 2.57
4285 15021 5.539048 TCAGACTTCCTTTTGCACTACTAC 58.461 41.667 0.00 0.00 0.00 2.73
4286 15022 5.801531 TCAGACTTCCTTTTGCACTACTA 57.198 39.130 0.00 0.00 0.00 1.82
4287 15023 4.689612 TCAGACTTCCTTTTGCACTACT 57.310 40.909 0.00 0.00 0.00 2.57
4288 15024 5.751243 TTTCAGACTTCCTTTTGCACTAC 57.249 39.130 0.00 0.00 0.00 2.73
4289 15025 6.377146 AGTTTTTCAGACTTCCTTTTGCACTA 59.623 34.615 0.00 0.00 0.00 2.74
4290 15026 5.185828 AGTTTTTCAGACTTCCTTTTGCACT 59.814 36.000 0.00 0.00 0.00 4.40
4291 15027 5.410924 AGTTTTTCAGACTTCCTTTTGCAC 58.589 37.500 0.00 0.00 0.00 4.57
4292 15028 5.659440 AGTTTTTCAGACTTCCTTTTGCA 57.341 34.783 0.00 0.00 0.00 4.08
4293 15029 6.575083 GAAGTTTTTCAGACTTCCTTTTGC 57.425 37.500 5.86 0.00 44.50 3.68
4300 15036 9.411801 AAAAAGTTCAGAAGTTTTTCAGACTTC 57.588 29.630 26.13 8.53 45.88 3.01
4376 15115 3.365265 GCAAGTTGAGGGGCACGG 61.365 66.667 7.16 0.00 0.00 4.94
4379 15118 2.594303 CGTGCAAGTTGAGGGGCA 60.594 61.111 7.16 0.00 0.00 5.36
4381 15120 0.392998 ATAGCGTGCAAGTTGAGGGG 60.393 55.000 7.16 0.00 0.00 4.79
4395 15134 7.095857 CCATAAAAGAGCTCTTTGAGTATAGCG 60.096 40.741 35.95 20.05 44.69 4.26
4399 15138 8.207545 CCTACCATAAAAGAGCTCTTTGAGTAT 58.792 37.037 35.95 26.85 44.69 2.12
4408 15147 4.755266 TGTCCCTACCATAAAAGAGCTC 57.245 45.455 5.27 5.27 0.00 4.09
4446 15185 3.242543 GCACATTAGATCAAGTTGGAGCG 60.243 47.826 2.34 0.00 0.00 5.03
4469 15208 3.578716 GCCTACTAGCATGGGAAGATGTA 59.421 47.826 0.00 0.00 0.00 2.29
4471 15210 2.369860 TGCCTACTAGCATGGGAAGATG 59.630 50.000 0.00 0.00 38.00 2.90
4477 15216 4.528596 ACTACTATTGCCTACTAGCATGGG 59.471 45.833 0.00 0.00 43.64 4.00
4479 15218 6.350277 GGGTACTACTATTGCCTACTAGCATG 60.350 46.154 0.00 0.00 43.64 4.06
4485 15224 6.527570 ACTAGGGTACTACTATTGCCTACT 57.472 41.667 0.00 0.00 0.00 2.57
4554 15293 5.403766 CGATTTTCATAGTTCGAGGATCCTG 59.596 44.000 22.02 11.87 33.59 3.86
4563 15313 5.155509 TGAATGCCGATTTTCATAGTTCG 57.844 39.130 0.00 0.00 0.00 3.95
4575 15325 0.752658 TCGAGGACATGAATGCCGAT 59.247 50.000 0.00 0.00 0.00 4.18
4580 15330 4.571984 TGCTACATTTCGAGGACATGAATG 59.428 41.667 0.00 0.00 0.00 2.67
4586 15336 3.244078 ACACTTGCTACATTTCGAGGACA 60.244 43.478 0.00 0.00 0.00 4.02
4593 15343 5.869753 AGATGACACACTTGCTACATTTC 57.130 39.130 0.00 0.00 0.00 2.17
4596 15346 6.042638 ACTTAGATGACACACTTGCTACAT 57.957 37.500 0.00 0.00 0.00 2.29
4652 15402 2.816087 GTCATGGTTCAACAGCATCAGT 59.184 45.455 0.00 0.00 41.97 3.41
4659 15409 1.192312 CGACGTGTCATGGTTCAACAG 59.808 52.381 0.00 0.00 0.00 3.16
4666 15416 0.744874 CCTATCCGACGTGTCATGGT 59.255 55.000 0.00 0.00 0.00 3.55
4678 15428 1.271656 GTACGAATGTCCCCCTATCCG 59.728 57.143 0.00 0.00 0.00 4.18
4693 15443 5.012664 AGGTCCAATATGGCAATATGTACGA 59.987 40.000 0.00 0.00 37.47 3.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.