Multiple sequence alignment - TraesCS4A01G201800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G201800 chr4A 100.000 4246 0 0 1 4246 491686825 491691070 0.000000e+00 7841.0
1 TraesCS4A01G201800 chr4D 92.202 3360 176 40 854 4179 81907389 81910696 0.000000e+00 4674.0
2 TraesCS4A01G201800 chr4B 93.238 2588 122 28 881 3444 115528591 115531149 0.000000e+00 3760.0
3 TraesCS4A01G201800 chr4B 87.566 378 41 4 3438 3815 115534573 115534944 2.350000e-117 433.0
4 TraesCS4A01G201800 chr4B 87.023 393 40 7 3852 4234 115535277 115535668 2.350000e-117 433.0
5 TraesCS4A01G201800 chr4B 89.313 131 7 1 688 818 115528404 115528527 1.580000e-34 158.0
6 TraesCS4A01G201800 chr7A 74.502 1757 347 70 997 2722 445625609 445623923 0.000000e+00 669.0
7 TraesCS4A01G201800 chr7A 79.558 362 61 9 2736 3095 445608413 445608063 3.280000e-61 246.0
8 TraesCS4A01G201800 chr2D 75.088 1413 277 42 1022 2398 643268895 643267522 1.310000e-164 590.0
9 TraesCS4A01G201800 chr2D 76.493 1038 195 33 2029 3040 643258466 643257452 1.750000e-143 520.0
10 TraesCS4A01G201800 chr2D 81.983 605 89 15 2500 3091 643322035 643322632 2.950000e-136 496.0
11 TraesCS4A01G201800 chr7D 83.028 601 87 12 2498 3095 393106039 393105451 8.080000e-147 531.0
12 TraesCS4A01G201800 chr7B 81.773 598 84 18 2087 2681 392814688 392814113 1.070000e-130 477.0
13 TraesCS4A01G201800 chr7B 78.378 259 45 8 2108 2362 25674975 25675226 1.580000e-34 158.0
14 TraesCS4A01G201800 chrUn 80.829 386 49 9 2036 2400 31725238 31724857 3.230000e-71 279.0
15 TraesCS4A01G201800 chr2A 79.379 354 50 13 2069 2400 768194024 768193672 1.190000e-55 228.0
16 TraesCS4A01G201800 chr2A 84.659 176 26 1 459 634 733778432 733778258 1.570000e-39 174.0
17 TraesCS4A01G201800 chr2A 84.259 108 16 1 463 570 679502533 679502639 2.090000e-18 104.0
18 TraesCS4A01G201800 chr2A 94.000 50 3 0 500 549 59837430 59837381 4.550000e-10 76.8
19 TraesCS4A01G201800 chr5B 85.714 77 7 4 2254 2328 293208938 293208864 1.270000e-10 78.7
20 TraesCS4A01G201800 chr5A 85.714 77 7 4 2254 2328 343959452 343959378 1.270000e-10 78.7
21 TraesCS4A01G201800 chr6D 73.303 221 47 11 1261 1475 40535001 40535215 2.120000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G201800 chr4A 491686825 491691070 4245 False 7841 7841 100.000 1 4246 1 chr4A.!!$F1 4245
1 TraesCS4A01G201800 chr4D 81907389 81910696 3307 False 4674 4674 92.202 854 4179 1 chr4D.!!$F1 3325
2 TraesCS4A01G201800 chr4B 115528404 115535668 7264 False 1196 3760 89.285 688 4234 4 chr4B.!!$F1 3546
3 TraesCS4A01G201800 chr7A 445623923 445625609 1686 True 669 669 74.502 997 2722 1 chr7A.!!$R2 1725
4 TraesCS4A01G201800 chr2D 643267522 643268895 1373 True 590 590 75.088 1022 2398 1 chr2D.!!$R2 1376
5 TraesCS4A01G201800 chr2D 643257452 643258466 1014 True 520 520 76.493 2029 3040 1 chr2D.!!$R1 1011
6 TraesCS4A01G201800 chr2D 643322035 643322632 597 False 496 496 81.983 2500 3091 1 chr2D.!!$F1 591
7 TraesCS4A01G201800 chr7D 393105451 393106039 588 True 531 531 83.028 2498 3095 1 chr7D.!!$R1 597
8 TraesCS4A01G201800 chr7B 392814113 392814688 575 True 477 477 81.773 2087 2681 1 chr7B.!!$R1 594

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
290 291 0.184933 TTGTGCTACCTGGCCAACTT 59.815 50.0 7.01 0.0 0.00 2.66 F
292 293 0.250727 GTGCTACCTGGCCAACTTGA 60.251 55.0 7.01 0.0 0.00 3.02 F
943 980 0.671796 AGCACGCCACGCTATATACA 59.328 50.0 0.00 0.0 38.15 2.29 F
2205 2288 0.108138 AGCGGTTCTCCAAGGATTCG 60.108 55.0 0.00 0.0 0.00 3.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1749 1817 0.454600 GATGTAGCTCCACGGACGAA 59.545 55.000 0.00 0.0 0.00 3.85 R
1790 1858 1.005394 TTCGGTTCCAAGGACGAGC 60.005 57.895 0.00 0.0 36.65 5.03 R
2747 2857 0.243095 AGCTGTAAACGTCGGACTCC 59.757 55.000 6.57 0.0 0.00 3.85 R
4137 8018 0.442310 ACGATCGCAACATCAAACCG 59.558 50.000 16.60 0.0 0.00 4.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 7.951706 AAAATTGAAACTTGCGAACATTTTG 57.048 28.000 0.00 0.00 0.00 2.44
39 40 6.660887 AATTGAAACTTGCGAACATTTTGT 57.339 29.167 0.00 0.00 0.00 2.83
40 41 7.763172 AATTGAAACTTGCGAACATTTTGTA 57.237 28.000 0.00 0.00 0.00 2.41
41 42 7.763172 ATTGAAACTTGCGAACATTTTGTAA 57.237 28.000 0.00 0.00 0.00 2.41
42 43 7.582435 TTGAAACTTGCGAACATTTTGTAAA 57.418 28.000 0.00 0.00 0.00 2.01
43 44 7.582435 TGAAACTTGCGAACATTTTGTAAAA 57.418 28.000 0.00 0.00 0.00 1.52
44 45 8.018677 TGAAACTTGCGAACATTTTGTAAAAA 57.981 26.923 0.00 0.00 0.00 1.94
45 46 7.952637 TGAAACTTGCGAACATTTTGTAAAAAC 59.047 29.630 0.00 0.00 0.00 2.43
46 47 6.952935 ACTTGCGAACATTTTGTAAAAACA 57.047 29.167 0.00 0.00 0.00 2.83
47 48 6.757162 ACTTGCGAACATTTTGTAAAAACAC 58.243 32.000 0.00 0.00 0.00 3.32
48 49 6.366332 ACTTGCGAACATTTTGTAAAAACACA 59.634 30.769 0.00 0.00 0.00 3.72
49 50 6.706055 TGCGAACATTTTGTAAAAACACAA 57.294 29.167 0.00 0.00 36.65 3.33
50 51 7.117241 TGCGAACATTTTGTAAAAACACAAA 57.883 28.000 0.00 0.00 44.50 2.83
51 52 7.010023 TGCGAACATTTTGTAAAAACACAAAC 58.990 30.769 1.12 0.00 45.52 2.93
52 53 6.463262 GCGAACATTTTGTAAAAACACAAACC 59.537 34.615 1.12 0.00 45.52 3.27
53 54 7.510630 CGAACATTTTGTAAAAACACAAACCA 58.489 30.769 1.12 0.00 45.52 3.67
54 55 8.171840 CGAACATTTTGTAAAAACACAAACCAT 58.828 29.630 1.12 0.00 45.52 3.55
55 56 9.833182 GAACATTTTGTAAAAACACAAACCATT 57.167 25.926 1.12 0.00 45.52 3.16
59 60 9.631452 ATTTTGTAAAAACACAAACCATTTTGG 57.369 25.926 1.12 0.00 45.52 3.28
60 61 7.979444 TTGTAAAAACACAAACCATTTTGGA 57.021 28.000 0.00 0.00 45.65 3.53
61 62 7.979444 TGTAAAAACACAAACCATTTTGGAA 57.021 28.000 0.00 0.00 45.65 3.53
62 63 8.391075 TGTAAAAACACAAACCATTTTGGAAA 57.609 26.923 0.00 0.00 45.65 3.13
63 64 9.014297 TGTAAAAACACAAACCATTTTGGAAAT 57.986 25.926 0.00 0.00 45.65 2.17
67 68 9.625747 AAAACACAAACCATTTTGGAAATATCT 57.374 25.926 0.00 0.00 45.65 1.98
68 69 8.606040 AACACAAACCATTTTGGAAATATCTG 57.394 30.769 0.00 0.00 45.65 2.90
69 70 7.734942 ACACAAACCATTTTGGAAATATCTGT 58.265 30.769 0.00 0.00 45.65 3.41
70 71 7.872483 ACACAAACCATTTTGGAAATATCTGTC 59.128 33.333 0.00 0.00 45.65 3.51
71 72 7.331687 CACAAACCATTTTGGAAATATCTGTCC 59.668 37.037 0.00 0.00 45.65 4.02
72 73 7.235399 ACAAACCATTTTGGAAATATCTGTCCT 59.765 33.333 0.00 0.00 45.65 3.85
73 74 7.797121 AACCATTTTGGAAATATCTGTCCTT 57.203 32.000 0.00 0.00 40.96 3.36
74 75 7.797121 ACCATTTTGGAAATATCTGTCCTTT 57.203 32.000 0.00 0.00 40.96 3.11
75 76 8.206126 ACCATTTTGGAAATATCTGTCCTTTT 57.794 30.769 0.00 0.00 40.96 2.27
76 77 8.659527 ACCATTTTGGAAATATCTGTCCTTTTT 58.340 29.630 0.00 0.00 40.96 1.94
212 213 9.605275 AAGAAATGAGAAAAGAAAAAGGAAAGG 57.395 29.630 0.00 0.00 0.00 3.11
213 214 8.981659 AGAAATGAGAAAAGAAAAAGGAAAGGA 58.018 29.630 0.00 0.00 0.00 3.36
214 215 9.599866 GAAATGAGAAAAGAAAAAGGAAAGGAA 57.400 29.630 0.00 0.00 0.00 3.36
215 216 8.948631 AATGAGAAAAGAAAAAGGAAAGGAAC 57.051 30.769 0.00 0.00 0.00 3.62
216 217 6.873997 TGAGAAAAGAAAAAGGAAAGGAACC 58.126 36.000 0.00 0.00 0.00 3.62
217 218 6.439058 TGAGAAAAGAAAAAGGAAAGGAACCA 59.561 34.615 0.00 0.00 0.00 3.67
218 219 6.878317 AGAAAAGAAAAAGGAAAGGAACCAG 58.122 36.000 0.00 0.00 0.00 4.00
219 220 6.440647 AGAAAAGAAAAAGGAAAGGAACCAGT 59.559 34.615 0.00 0.00 0.00 4.00
220 221 5.598416 AAGAAAAAGGAAAGGAACCAGTG 57.402 39.130 0.00 0.00 0.00 3.66
221 222 4.867086 AGAAAAAGGAAAGGAACCAGTGA 58.133 39.130 0.00 0.00 0.00 3.41
222 223 5.458595 AGAAAAAGGAAAGGAACCAGTGAT 58.541 37.500 0.00 0.00 0.00 3.06
223 224 5.302823 AGAAAAAGGAAAGGAACCAGTGATG 59.697 40.000 0.00 0.00 0.00 3.07
224 225 4.453480 AAAGGAAAGGAACCAGTGATGA 57.547 40.909 0.00 0.00 0.00 2.92
225 226 4.453480 AAGGAAAGGAACCAGTGATGAA 57.547 40.909 0.00 0.00 0.00 2.57
226 227 4.026356 AGGAAAGGAACCAGTGATGAAG 57.974 45.455 0.00 0.00 0.00 3.02
227 228 3.652869 AGGAAAGGAACCAGTGATGAAGA 59.347 43.478 0.00 0.00 0.00 2.87
228 229 4.104738 AGGAAAGGAACCAGTGATGAAGAA 59.895 41.667 0.00 0.00 0.00 2.52
229 230 4.827284 GGAAAGGAACCAGTGATGAAGAAA 59.173 41.667 0.00 0.00 0.00 2.52
230 231 5.301805 GGAAAGGAACCAGTGATGAAGAAAA 59.698 40.000 0.00 0.00 0.00 2.29
231 232 6.396829 AAAGGAACCAGTGATGAAGAAAAG 57.603 37.500 0.00 0.00 0.00 2.27
232 233 5.310409 AGGAACCAGTGATGAAGAAAAGA 57.690 39.130 0.00 0.00 0.00 2.52
233 234 5.694995 AGGAACCAGTGATGAAGAAAAGAA 58.305 37.500 0.00 0.00 0.00 2.52
234 235 6.129179 AGGAACCAGTGATGAAGAAAAGAAA 58.871 36.000 0.00 0.00 0.00 2.52
235 236 6.607198 AGGAACCAGTGATGAAGAAAAGAAAA 59.393 34.615 0.00 0.00 0.00 2.29
236 237 6.920210 GGAACCAGTGATGAAGAAAAGAAAAG 59.080 38.462 0.00 0.00 0.00 2.27
237 238 7.201821 GGAACCAGTGATGAAGAAAAGAAAAGA 60.202 37.037 0.00 0.00 0.00 2.52
238 239 7.645058 ACCAGTGATGAAGAAAAGAAAAGAA 57.355 32.000 0.00 0.00 0.00 2.52
239 240 8.066612 ACCAGTGATGAAGAAAAGAAAAGAAA 57.933 30.769 0.00 0.00 0.00 2.52
240 241 8.531146 ACCAGTGATGAAGAAAAGAAAAGAAAA 58.469 29.630 0.00 0.00 0.00 2.29
241 242 9.538508 CCAGTGATGAAGAAAAGAAAAGAAAAT 57.461 29.630 0.00 0.00 0.00 1.82
283 284 5.712152 AAGAAAGAAATTGTGCTACCTGG 57.288 39.130 0.00 0.00 0.00 4.45
284 285 3.507622 AGAAAGAAATTGTGCTACCTGGC 59.492 43.478 0.00 0.00 0.00 4.85
285 286 1.839424 AGAAATTGTGCTACCTGGCC 58.161 50.000 0.00 0.00 0.00 5.36
286 287 1.075374 AGAAATTGTGCTACCTGGCCA 59.925 47.619 4.71 4.71 0.00 5.36
287 288 1.892474 GAAATTGTGCTACCTGGCCAA 59.108 47.619 7.01 0.00 0.00 4.52
288 289 1.256812 AATTGTGCTACCTGGCCAAC 58.743 50.000 7.01 0.45 0.00 3.77
289 290 0.405585 ATTGTGCTACCTGGCCAACT 59.594 50.000 7.01 0.00 0.00 3.16
290 291 0.184933 TTGTGCTACCTGGCCAACTT 59.815 50.000 7.01 0.00 0.00 2.66
291 292 0.537143 TGTGCTACCTGGCCAACTTG 60.537 55.000 7.01 0.00 0.00 3.16
292 293 0.250727 GTGCTACCTGGCCAACTTGA 60.251 55.000 7.01 0.00 0.00 3.02
293 294 0.698238 TGCTACCTGGCCAACTTGAT 59.302 50.000 7.01 0.00 0.00 2.57
294 295 1.075374 TGCTACCTGGCCAACTTGATT 59.925 47.619 7.01 0.00 0.00 2.57
295 296 2.307392 TGCTACCTGGCCAACTTGATTA 59.693 45.455 7.01 0.00 0.00 1.75
296 297 3.053693 TGCTACCTGGCCAACTTGATTAT 60.054 43.478 7.01 0.00 0.00 1.28
297 298 4.165180 TGCTACCTGGCCAACTTGATTATA 59.835 41.667 7.01 0.00 0.00 0.98
298 299 4.757149 GCTACCTGGCCAACTTGATTATAG 59.243 45.833 7.01 0.00 0.00 1.31
299 300 5.454755 GCTACCTGGCCAACTTGATTATAGA 60.455 44.000 7.01 0.00 0.00 1.98
300 301 5.041191 ACCTGGCCAACTTGATTATAGAG 57.959 43.478 7.01 0.00 0.00 2.43
301 302 4.475016 ACCTGGCCAACTTGATTATAGAGT 59.525 41.667 7.01 0.00 0.00 3.24
302 303 5.665812 ACCTGGCCAACTTGATTATAGAGTA 59.334 40.000 7.01 0.00 0.00 2.59
303 304 5.992217 CCTGGCCAACTTGATTATAGAGTAC 59.008 44.000 7.01 0.00 0.00 2.73
304 305 6.183361 CCTGGCCAACTTGATTATAGAGTACT 60.183 42.308 7.01 0.00 0.00 2.73
305 306 6.817184 TGGCCAACTTGATTATAGAGTACTC 58.183 40.000 15.41 15.41 0.00 2.59
306 307 6.183360 TGGCCAACTTGATTATAGAGTACTCC 60.183 42.308 19.38 3.52 0.00 3.85
307 308 6.042208 GGCCAACTTGATTATAGAGTACTCCT 59.958 42.308 19.38 9.79 0.00 3.69
308 309 7.232941 GGCCAACTTGATTATAGAGTACTCCTA 59.767 40.741 19.38 11.16 0.00 2.94
309 310 8.083462 GCCAACTTGATTATAGAGTACTCCTAC 58.917 40.741 19.38 6.27 0.00 3.18
310 311 9.357161 CCAACTTGATTATAGAGTACTCCTACT 57.643 37.037 19.38 6.02 35.77 2.57
344 345 9.768662 AAAAAGACAATCATGTGAAGCTTTATT 57.231 25.926 0.00 0.00 40.74 1.40
345 346 8.752766 AAAGACAATCATGTGAAGCTTTATTG 57.247 30.769 0.00 7.13 40.74 1.90
346 347 7.692460 AGACAATCATGTGAAGCTTTATTGA 57.308 32.000 0.00 4.89 40.74 2.57
347 348 8.114331 AGACAATCATGTGAAGCTTTATTGAA 57.886 30.769 0.00 0.00 40.74 2.69
348 349 8.746530 AGACAATCATGTGAAGCTTTATTGAAT 58.253 29.630 0.00 0.00 40.74 2.57
349 350 8.922058 ACAATCATGTGAAGCTTTATTGAATC 57.078 30.769 0.00 0.00 38.69 2.52
350 351 7.699391 ACAATCATGTGAAGCTTTATTGAATCG 59.301 33.333 0.00 1.02 38.69 3.34
351 352 6.741992 TCATGTGAAGCTTTATTGAATCGT 57.258 33.333 0.00 0.00 0.00 3.73
352 353 6.775088 TCATGTGAAGCTTTATTGAATCGTC 58.225 36.000 0.00 0.00 0.00 4.20
353 354 6.371271 TCATGTGAAGCTTTATTGAATCGTCA 59.629 34.615 0.00 0.00 0.00 4.35
354 355 5.927030 TGTGAAGCTTTATTGAATCGTCAC 58.073 37.500 0.00 0.00 31.90 3.67
355 356 5.468409 TGTGAAGCTTTATTGAATCGTCACA 59.532 36.000 0.00 2.67 40.21 3.58
356 357 6.017523 TGTGAAGCTTTATTGAATCGTCACAA 60.018 34.615 0.00 0.00 39.72 3.33
357 358 7.023575 GTGAAGCTTTATTGAATCGTCACAAT 58.976 34.615 0.00 0.00 39.53 2.71
358 359 7.007725 GTGAAGCTTTATTGAATCGTCACAATG 59.992 37.037 0.00 0.00 37.32 2.82
359 360 6.500684 AGCTTTATTGAATCGTCACAATGT 57.499 33.333 0.00 0.00 37.32 2.71
360 361 6.913170 AGCTTTATTGAATCGTCACAATGTT 58.087 32.000 0.00 0.00 37.32 2.71
361 362 7.370383 AGCTTTATTGAATCGTCACAATGTTT 58.630 30.769 0.00 0.00 37.32 2.83
362 363 8.511321 AGCTTTATTGAATCGTCACAATGTTTA 58.489 29.630 0.00 0.00 37.32 2.01
363 364 8.575454 GCTTTATTGAATCGTCACAATGTTTAC 58.425 33.333 0.00 0.00 37.32 2.01
364 365 9.605955 CTTTATTGAATCGTCACAATGTTTACA 57.394 29.630 0.00 0.00 37.32 2.41
365 366 9.605955 TTTATTGAATCGTCACAATGTTTACAG 57.394 29.630 0.00 0.00 37.32 2.74
366 367 6.612247 TTGAATCGTCACAATGTTTACAGT 57.388 33.333 0.00 0.00 31.90 3.55
367 368 5.984627 TGAATCGTCACAATGTTTACAGTG 58.015 37.500 8.60 8.60 46.23 3.66
368 369 5.755861 TGAATCGTCACAATGTTTACAGTGA 59.244 36.000 16.19 8.70 43.86 3.41
369 370 6.426633 TGAATCGTCACAATGTTTACAGTGAT 59.573 34.615 16.19 0.00 43.86 3.06
370 371 5.590104 TCGTCACAATGTTTACAGTGATG 57.410 39.130 16.19 14.85 43.86 3.07
371 372 5.590104 CGTCACAATGTTTACAGTGATGA 57.410 39.130 16.19 12.39 45.97 2.92
372 373 5.984627 CGTCACAATGTTTACAGTGATGAA 58.015 37.500 16.19 0.00 45.97 2.57
373 374 6.602179 CGTCACAATGTTTACAGTGATGAAT 58.398 36.000 16.19 0.00 45.97 2.57
374 375 7.077605 CGTCACAATGTTTACAGTGATGAATT 58.922 34.615 16.19 0.00 45.97 2.17
375 376 8.227119 CGTCACAATGTTTACAGTGATGAATTA 58.773 33.333 16.19 0.00 45.97 1.40
376 377 9.891828 GTCACAATGTTTACAGTGATGAATTAA 57.108 29.630 16.19 0.00 43.86 1.40
402 403 9.579610 AAGTTTTATTTTTGCGAAAATGATTCG 57.420 25.926 27.82 6.24 43.44 3.34
403 404 8.220434 AGTTTTATTTTTGCGAAAATGATTCGG 58.780 29.630 27.82 0.00 43.44 4.30
404 405 7.875316 TTTATTTTTGCGAAAATGATTCGGA 57.125 28.000 27.82 9.10 43.44 4.55
405 406 8.472683 TTTATTTTTGCGAAAATGATTCGGAT 57.527 26.923 27.82 7.85 43.44 4.18
406 407 6.573617 ATTTTTGCGAAAATGATTCGGATC 57.426 33.333 21.41 0.00 42.37 3.36
407 408 3.691049 TTGCGAAAATGATTCGGATCC 57.309 42.857 11.92 0.00 41.58 3.36
408 409 2.637947 TGCGAAAATGATTCGGATCCA 58.362 42.857 13.41 0.00 41.76 3.41
409 410 3.213506 TGCGAAAATGATTCGGATCCAT 58.786 40.909 13.41 0.00 41.76 3.41
410 411 3.631686 TGCGAAAATGATTCGGATCCATT 59.368 39.130 13.41 0.04 41.76 3.16
411 412 4.819088 TGCGAAAATGATTCGGATCCATTA 59.181 37.500 13.41 0.00 41.76 1.90
412 413 5.473162 TGCGAAAATGATTCGGATCCATTAT 59.527 36.000 13.41 0.95 41.76 1.28
413 414 6.024049 GCGAAAATGATTCGGATCCATTATC 58.976 40.000 13.41 11.12 41.76 1.75
414 415 6.348458 GCGAAAATGATTCGGATCCATTATCA 60.348 38.462 13.41 16.13 41.76 2.15
415 416 7.584108 CGAAAATGATTCGGATCCATTATCAA 58.416 34.615 18.80 7.81 38.19 2.57
416 417 8.075574 CGAAAATGATTCGGATCCATTATCAAA 58.924 33.333 18.80 3.53 38.19 2.69
417 418 9.403110 GAAAATGATTCGGATCCATTATCAAAG 57.597 33.333 18.80 0.00 36.20 2.77
418 419 8.469309 AAATGATTCGGATCCATTATCAAAGT 57.531 30.769 18.80 9.01 36.20 2.66
419 420 8.469309 AATGATTCGGATCCATTATCAAAGTT 57.531 30.769 18.80 10.09 36.20 2.66
420 421 7.496529 TGATTCGGATCCATTATCAAAGTTC 57.503 36.000 13.41 0.00 36.20 3.01
421 422 7.053498 TGATTCGGATCCATTATCAAAGTTCA 58.947 34.615 13.41 0.00 36.20 3.18
422 423 6.925610 TTCGGATCCATTATCAAAGTTCAG 57.074 37.500 13.41 0.00 36.20 3.02
423 424 4.816385 TCGGATCCATTATCAAAGTTCAGC 59.184 41.667 13.41 0.00 36.20 4.26
424 425 4.319046 CGGATCCATTATCAAAGTTCAGCG 60.319 45.833 13.41 0.00 36.20 5.18
425 426 4.816385 GGATCCATTATCAAAGTTCAGCGA 59.184 41.667 6.95 0.00 36.20 4.93
426 427 5.296780 GGATCCATTATCAAAGTTCAGCGAA 59.703 40.000 6.95 0.00 36.20 4.70
427 428 5.801350 TCCATTATCAAAGTTCAGCGAAG 57.199 39.130 0.00 0.00 0.00 3.79
428 429 4.635765 TCCATTATCAAAGTTCAGCGAAGG 59.364 41.667 0.00 0.00 0.00 3.46
429 430 4.396166 CCATTATCAAAGTTCAGCGAAGGT 59.604 41.667 0.00 0.00 41.48 3.50
430 431 5.584649 CCATTATCAAAGTTCAGCGAAGGTA 59.415 40.000 0.00 0.00 35.08 3.08
431 432 6.456988 CCATTATCAAAGTTCAGCGAAGGTAC 60.457 42.308 0.00 0.00 35.08 3.34
432 433 3.462483 TCAAAGTTCAGCGAAGGTACA 57.538 42.857 0.00 0.00 35.08 2.90
433 434 3.799366 TCAAAGTTCAGCGAAGGTACAA 58.201 40.909 0.00 0.00 35.08 2.41
434 435 4.193090 TCAAAGTTCAGCGAAGGTACAAA 58.807 39.130 0.00 0.00 35.08 2.83
435 436 4.272504 TCAAAGTTCAGCGAAGGTACAAAG 59.727 41.667 0.00 0.00 35.08 2.77
436 437 2.143925 AGTTCAGCGAAGGTACAAAGC 58.856 47.619 0.00 0.00 35.08 3.51
437 438 1.871039 GTTCAGCGAAGGTACAAAGCA 59.129 47.619 0.00 0.00 35.08 3.91
438 439 2.472695 TCAGCGAAGGTACAAAGCAT 57.527 45.000 0.00 0.00 35.08 3.79
439 440 2.346803 TCAGCGAAGGTACAAAGCATC 58.653 47.619 0.00 0.00 35.08 3.91
440 441 2.028112 TCAGCGAAGGTACAAAGCATCT 60.028 45.455 0.00 0.00 35.08 2.90
441 442 2.349886 CAGCGAAGGTACAAAGCATCTC 59.650 50.000 0.00 0.00 35.08 2.75
442 443 1.324736 GCGAAGGTACAAAGCATCTCG 59.675 52.381 0.00 0.00 0.00 4.04
443 444 2.876091 CGAAGGTACAAAGCATCTCGA 58.124 47.619 0.00 0.00 0.00 4.04
444 445 3.250744 CGAAGGTACAAAGCATCTCGAA 58.749 45.455 0.00 0.00 0.00 3.71
445 446 3.678072 CGAAGGTACAAAGCATCTCGAAA 59.322 43.478 0.00 0.00 0.00 3.46
446 447 4.151689 CGAAGGTACAAAGCATCTCGAAAA 59.848 41.667 0.00 0.00 0.00 2.29
447 448 5.163854 CGAAGGTACAAAGCATCTCGAAAAT 60.164 40.000 0.00 0.00 0.00 1.82
448 449 6.035650 CGAAGGTACAAAGCATCTCGAAAATA 59.964 38.462 0.00 0.00 0.00 1.40
449 450 6.910536 AGGTACAAAGCATCTCGAAAATAG 57.089 37.500 0.00 0.00 0.00 1.73
450 451 6.407202 AGGTACAAAGCATCTCGAAAATAGT 58.593 36.000 0.00 0.00 0.00 2.12
451 452 7.553334 AGGTACAAAGCATCTCGAAAATAGTA 58.447 34.615 0.00 0.00 0.00 1.82
452 453 8.038944 AGGTACAAAGCATCTCGAAAATAGTAA 58.961 33.333 0.00 0.00 0.00 2.24
453 454 8.662141 GGTACAAAGCATCTCGAAAATAGTAAA 58.338 33.333 0.00 0.00 0.00 2.01
482 483 6.827586 GGTCTAACCAAAACATAATGACCA 57.172 37.500 0.00 0.00 40.56 4.02
483 484 7.222000 GGTCTAACCAAAACATAATGACCAA 57.778 36.000 0.00 0.00 40.56 3.67
484 485 7.088272 GGTCTAACCAAAACATAATGACCAAC 58.912 38.462 0.00 0.00 40.56 3.77
485 486 7.039993 GGTCTAACCAAAACATAATGACCAACT 60.040 37.037 0.00 0.00 40.56 3.16
486 487 8.021396 GTCTAACCAAAACATAATGACCAACTC 58.979 37.037 0.00 0.00 0.00 3.01
487 488 5.722021 ACCAAAACATAATGACCAACTCC 57.278 39.130 0.00 0.00 0.00 3.85
488 489 5.393866 ACCAAAACATAATGACCAACTCCT 58.606 37.500 0.00 0.00 0.00 3.69
489 490 6.548321 ACCAAAACATAATGACCAACTCCTA 58.452 36.000 0.00 0.00 0.00 2.94
490 491 6.659242 ACCAAAACATAATGACCAACTCCTAG 59.341 38.462 0.00 0.00 0.00 3.02
491 492 6.659242 CCAAAACATAATGACCAACTCCTAGT 59.341 38.462 0.00 0.00 0.00 2.57
492 493 7.176690 CCAAAACATAATGACCAACTCCTAGTT 59.823 37.037 0.00 0.00 39.39 2.24
504 505 4.494091 ACTCCTAGTTGTAATGCATGCT 57.506 40.909 20.33 1.26 0.00 3.79
505 506 4.848357 ACTCCTAGTTGTAATGCATGCTT 58.152 39.130 20.33 10.16 0.00 3.91
506 507 4.878397 ACTCCTAGTTGTAATGCATGCTTC 59.122 41.667 20.33 7.10 0.00 3.86
507 508 4.842574 TCCTAGTTGTAATGCATGCTTCA 58.157 39.130 20.33 9.61 0.00 3.02
508 509 4.635765 TCCTAGTTGTAATGCATGCTTCAC 59.364 41.667 20.33 9.73 0.00 3.18
509 510 4.637534 CCTAGTTGTAATGCATGCTTCACT 59.362 41.667 20.33 14.10 0.00 3.41
510 511 5.817296 CCTAGTTGTAATGCATGCTTCACTA 59.183 40.000 20.33 14.42 0.00 2.74
511 512 5.808042 AGTTGTAATGCATGCTTCACTAG 57.192 39.130 20.33 0.00 0.00 2.57
512 513 5.491070 AGTTGTAATGCATGCTTCACTAGA 58.509 37.500 20.33 0.00 0.00 2.43
513 514 6.118170 AGTTGTAATGCATGCTTCACTAGAT 58.882 36.000 20.33 0.00 0.00 1.98
514 515 6.600822 AGTTGTAATGCATGCTTCACTAGATT 59.399 34.615 20.33 9.83 0.00 2.40
515 516 7.770433 AGTTGTAATGCATGCTTCACTAGATTA 59.230 33.333 20.33 8.83 0.00 1.75
516 517 8.562892 GTTGTAATGCATGCTTCACTAGATTAT 58.437 33.333 20.33 0.00 0.00 1.28
517 518 8.091385 TGTAATGCATGCTTCACTAGATTATG 57.909 34.615 20.33 0.00 0.00 1.90
518 519 7.933033 TGTAATGCATGCTTCACTAGATTATGA 59.067 33.333 20.33 0.98 0.00 2.15
519 520 7.436430 AATGCATGCTTCACTAGATTATGAG 57.564 36.000 20.33 0.00 0.00 2.90
520 521 4.753610 TGCATGCTTCACTAGATTATGAGC 59.246 41.667 20.33 0.00 0.00 4.26
521 522 4.153835 GCATGCTTCACTAGATTATGAGCC 59.846 45.833 11.37 0.00 0.00 4.70
522 523 5.549347 CATGCTTCACTAGATTATGAGCCT 58.451 41.667 0.00 0.00 0.00 4.58
523 524 5.207110 TGCTTCACTAGATTATGAGCCTC 57.793 43.478 0.00 0.00 0.00 4.70
524 525 4.651045 TGCTTCACTAGATTATGAGCCTCA 59.349 41.667 0.00 0.00 0.00 3.86
525 526 5.129320 TGCTTCACTAGATTATGAGCCTCAA 59.871 40.000 0.00 0.00 0.00 3.02
526 527 6.051717 GCTTCACTAGATTATGAGCCTCAAA 58.948 40.000 0.00 0.00 0.00 2.69
527 528 6.540189 GCTTCACTAGATTATGAGCCTCAAAA 59.460 38.462 0.00 0.00 0.00 2.44
528 529 7.228308 GCTTCACTAGATTATGAGCCTCAAAAT 59.772 37.037 0.00 0.00 0.00 1.82
529 530 9.118300 CTTCACTAGATTATGAGCCTCAAAATT 57.882 33.333 0.00 0.00 0.00 1.82
530 531 8.668510 TCACTAGATTATGAGCCTCAAAATTC 57.331 34.615 0.00 0.00 0.00 2.17
531 532 8.267183 TCACTAGATTATGAGCCTCAAAATTCA 58.733 33.333 0.00 0.00 0.00 2.57
532 533 8.896744 CACTAGATTATGAGCCTCAAAATTCAA 58.103 33.333 0.00 0.00 0.00 2.69
533 534 9.466497 ACTAGATTATGAGCCTCAAAATTCAAA 57.534 29.630 0.00 0.00 0.00 2.69
534 535 9.727627 CTAGATTATGAGCCTCAAAATTCAAAC 57.272 33.333 0.00 0.00 0.00 2.93
535 536 8.358582 AGATTATGAGCCTCAAAATTCAAACT 57.641 30.769 0.00 0.00 0.00 2.66
536 537 8.465201 AGATTATGAGCCTCAAAATTCAAACTC 58.535 33.333 0.00 0.00 0.00 3.01
537 538 4.853924 TGAGCCTCAAAATTCAAACTCC 57.146 40.909 0.00 0.00 0.00 3.85
538 539 4.473444 TGAGCCTCAAAATTCAAACTCCT 58.527 39.130 0.00 0.00 0.00 3.69
539 540 5.630121 TGAGCCTCAAAATTCAAACTCCTA 58.370 37.500 0.00 0.00 0.00 2.94
540 541 6.068010 TGAGCCTCAAAATTCAAACTCCTAA 58.932 36.000 0.00 0.00 0.00 2.69
541 542 6.549364 TGAGCCTCAAAATTCAAACTCCTAAA 59.451 34.615 0.00 0.00 0.00 1.85
542 543 6.749139 AGCCTCAAAATTCAAACTCCTAAAC 58.251 36.000 0.00 0.00 0.00 2.01
543 544 6.551227 AGCCTCAAAATTCAAACTCCTAAACT 59.449 34.615 0.00 0.00 0.00 2.66
544 545 6.863645 GCCTCAAAATTCAAACTCCTAAACTC 59.136 38.462 0.00 0.00 0.00 3.01
545 546 7.470009 GCCTCAAAATTCAAACTCCTAAACTCA 60.470 37.037 0.00 0.00 0.00 3.41
546 547 8.579863 CCTCAAAATTCAAACTCCTAAACTCAT 58.420 33.333 0.00 0.00 0.00 2.90
547 548 9.403110 CTCAAAATTCAAACTCCTAAACTCATG 57.597 33.333 0.00 0.00 0.00 3.07
548 549 8.359642 TCAAAATTCAAACTCCTAAACTCATGG 58.640 33.333 0.00 0.00 0.00 3.66
549 550 8.359642 CAAAATTCAAACTCCTAAACTCATGGA 58.640 33.333 0.00 0.00 0.00 3.41
550 551 8.655935 AAATTCAAACTCCTAAACTCATGGAT 57.344 30.769 0.00 0.00 0.00 3.41
551 552 9.753674 AAATTCAAACTCCTAAACTCATGGATA 57.246 29.630 0.00 0.00 0.00 2.59
552 553 9.753674 AATTCAAACTCCTAAACTCATGGATAA 57.246 29.630 0.00 0.00 0.00 1.75
553 554 9.753674 ATTCAAACTCCTAAACTCATGGATAAA 57.246 29.630 0.00 0.00 0.00 1.40
554 555 9.581289 TTCAAACTCCTAAACTCATGGATAAAA 57.419 29.630 0.00 0.00 0.00 1.52
555 556 9.010029 TCAAACTCCTAAACTCATGGATAAAAC 57.990 33.333 0.00 0.00 0.00 2.43
556 557 9.014297 CAAACTCCTAAACTCATGGATAAAACT 57.986 33.333 0.00 0.00 0.00 2.66
558 559 9.668497 AACTCCTAAACTCATGGATAAAACTAC 57.332 33.333 0.00 0.00 0.00 2.73
559 560 8.822805 ACTCCTAAACTCATGGATAAAACTACA 58.177 33.333 0.00 0.00 0.00 2.74
560 561 9.838339 CTCCTAAACTCATGGATAAAACTACAT 57.162 33.333 0.00 0.00 0.00 2.29
592 593 8.779354 AAACTACCAGAGTACTTCATGATTTC 57.221 34.615 0.00 0.00 37.44 2.17
593 594 7.482169 ACTACCAGAGTACTTCATGATTTCA 57.518 36.000 0.00 0.00 36.27 2.69
594 595 8.083828 ACTACCAGAGTACTTCATGATTTCAT 57.916 34.615 0.00 0.00 36.27 2.57
595 596 7.984050 ACTACCAGAGTACTTCATGATTTCATG 59.016 37.037 13.25 13.25 44.88 3.07
616 617 9.929722 TTCATGTAAAATAGCATCGTAAATGAC 57.070 29.630 0.00 0.00 0.00 3.06
617 618 9.325198 TCATGTAAAATAGCATCGTAAATGACT 57.675 29.630 0.00 0.00 0.00 3.41
618 619 9.935682 CATGTAAAATAGCATCGTAAATGACTT 57.064 29.630 0.00 0.00 0.00 3.01
620 621 9.157104 TGTAAAATAGCATCGTAAATGACTTCA 57.843 29.630 0.00 0.00 0.00 3.02
623 624 9.722056 AAAATAGCATCGTAAATGACTTCATTC 57.278 29.630 4.94 0.00 45.06 2.67
624 625 8.668510 AATAGCATCGTAAATGACTTCATTCT 57.331 30.769 4.94 0.00 45.06 2.40
625 626 6.992063 AGCATCGTAAATGACTTCATTCTT 57.008 33.333 4.94 0.00 45.06 2.52
626 627 7.009568 AGCATCGTAAATGACTTCATTCTTC 57.990 36.000 4.94 0.00 45.06 2.87
627 628 6.820656 AGCATCGTAAATGACTTCATTCTTCT 59.179 34.615 4.94 0.00 45.06 2.85
628 629 6.904011 GCATCGTAAATGACTTCATTCTTCTG 59.096 38.462 4.94 2.30 45.06 3.02
629 630 6.408858 TCGTAAATGACTTCATTCTTCTGC 57.591 37.500 4.94 0.00 45.06 4.26
630 631 6.166279 TCGTAAATGACTTCATTCTTCTGCT 58.834 36.000 4.94 0.00 45.06 4.24
631 632 6.650807 TCGTAAATGACTTCATTCTTCTGCTT 59.349 34.615 4.94 0.00 45.06 3.91
632 633 6.740002 CGTAAATGACTTCATTCTTCTGCTTG 59.260 38.462 4.94 0.00 45.06 4.01
633 634 6.889301 AAATGACTTCATTCTTCTGCTTGA 57.111 33.333 4.94 0.00 45.06 3.02
634 635 5.876612 ATGACTTCATTCTTCTGCTTGAC 57.123 39.130 0.00 0.00 31.37 3.18
635 636 4.707105 TGACTTCATTCTTCTGCTTGACA 58.293 39.130 0.00 0.00 0.00 3.58
636 637 4.512944 TGACTTCATTCTTCTGCTTGACAC 59.487 41.667 0.00 0.00 0.00 3.67
637 638 3.817647 ACTTCATTCTTCTGCTTGACACC 59.182 43.478 0.00 0.00 0.00 4.16
638 639 3.490439 TCATTCTTCTGCTTGACACCA 57.510 42.857 0.00 0.00 0.00 4.17
639 640 3.141398 TCATTCTTCTGCTTGACACCAC 58.859 45.455 0.00 0.00 0.00 4.16
640 641 1.967319 TTCTTCTGCTTGACACCACC 58.033 50.000 0.00 0.00 0.00 4.61
641 642 1.131638 TCTTCTGCTTGACACCACCT 58.868 50.000 0.00 0.00 0.00 4.00
642 643 1.490490 TCTTCTGCTTGACACCACCTT 59.510 47.619 0.00 0.00 0.00 3.50
643 644 1.605710 CTTCTGCTTGACACCACCTTG 59.394 52.381 0.00 0.00 0.00 3.61
644 645 0.819259 TCTGCTTGACACCACCTTGC 60.819 55.000 0.00 0.00 0.00 4.01
645 646 1.077140 TGCTTGACACCACCTTGCA 60.077 52.632 0.00 0.00 0.00 4.08
646 647 0.682532 TGCTTGACACCACCTTGCAA 60.683 50.000 0.00 0.00 0.00 4.08
647 648 0.675633 GCTTGACACCACCTTGCAAT 59.324 50.000 0.00 0.00 0.00 3.56
648 649 1.885887 GCTTGACACCACCTTGCAATA 59.114 47.619 0.00 0.00 0.00 1.90
649 650 2.493278 GCTTGACACCACCTTGCAATAT 59.507 45.455 0.00 0.00 0.00 1.28
650 651 3.674138 GCTTGACACCACCTTGCAATATG 60.674 47.826 0.00 0.89 0.00 1.78
651 652 1.818060 TGACACCACCTTGCAATATGC 59.182 47.619 0.00 0.00 45.29 3.14
652 653 2.094675 GACACCACCTTGCAATATGCT 58.905 47.619 0.00 0.00 45.31 3.79
653 654 1.820519 ACACCACCTTGCAATATGCTG 59.179 47.619 0.00 1.82 45.31 4.41
654 655 0.819582 ACCACCTTGCAATATGCTGC 59.180 50.000 0.00 0.00 45.31 5.25
663 664 3.653539 GCAATATGCTGCATGAATGGA 57.346 42.857 24.59 4.11 42.17 3.41
664 665 3.985008 GCAATATGCTGCATGAATGGAA 58.015 40.909 24.59 3.33 42.17 3.53
665 666 4.566004 GCAATATGCTGCATGAATGGAAT 58.434 39.130 24.59 5.71 42.17 3.01
666 667 4.388773 GCAATATGCTGCATGAATGGAATG 59.611 41.667 24.59 8.27 42.17 2.67
667 668 5.538118 CAATATGCTGCATGAATGGAATGT 58.462 37.500 24.59 0.00 0.00 2.71
668 669 6.683715 CAATATGCTGCATGAATGGAATGTA 58.316 36.000 24.59 0.47 0.00 2.29
669 670 4.848562 ATGCTGCATGAATGGAATGTAG 57.151 40.909 15.44 0.00 39.80 2.74
670 671 2.953648 TGCTGCATGAATGGAATGTAGG 59.046 45.455 0.00 0.00 37.97 3.18
671 672 2.954318 GCTGCATGAATGGAATGTAGGT 59.046 45.455 0.00 0.00 37.97 3.08
672 673 3.382546 GCTGCATGAATGGAATGTAGGTT 59.617 43.478 0.00 0.00 37.97 3.50
673 674 4.498682 GCTGCATGAATGGAATGTAGGTTC 60.499 45.833 0.00 0.00 37.97 3.62
674 675 4.598022 TGCATGAATGGAATGTAGGTTCA 58.402 39.130 0.00 0.00 33.82 3.18
675 676 4.641541 TGCATGAATGGAATGTAGGTTCAG 59.358 41.667 0.00 0.00 32.93 3.02
676 677 4.883585 GCATGAATGGAATGTAGGTTCAGA 59.116 41.667 0.00 0.00 32.93 3.27
677 678 5.533903 GCATGAATGGAATGTAGGTTCAGAT 59.466 40.000 0.00 0.00 32.93 2.90
678 679 6.712095 GCATGAATGGAATGTAGGTTCAGATA 59.288 38.462 0.00 0.00 32.93 1.98
679 680 7.229306 GCATGAATGGAATGTAGGTTCAGATAA 59.771 37.037 0.00 0.00 32.93 1.75
680 681 9.123902 CATGAATGGAATGTAGGTTCAGATAAA 57.876 33.333 0.00 0.00 32.93 1.40
681 682 8.737168 TGAATGGAATGTAGGTTCAGATAAAG 57.263 34.615 0.00 0.00 0.00 1.85
682 683 8.548025 TGAATGGAATGTAGGTTCAGATAAAGA 58.452 33.333 0.00 0.00 0.00 2.52
683 684 8.970859 AATGGAATGTAGGTTCAGATAAAGAG 57.029 34.615 0.00 0.00 0.00 2.85
684 685 6.889198 TGGAATGTAGGTTCAGATAAAGAGG 58.111 40.000 0.00 0.00 0.00 3.69
685 686 5.760743 GGAATGTAGGTTCAGATAAAGAGGC 59.239 44.000 0.00 0.00 0.00 4.70
686 687 4.386867 TGTAGGTTCAGATAAAGAGGCG 57.613 45.455 0.00 0.00 0.00 5.52
750 751 2.603473 ACGCTGGAGTGGGCAGTA 60.603 61.111 0.00 0.00 0.00 2.74
762 763 1.582968 GGCAGTAAGTCGTCGGTGA 59.417 57.895 0.00 0.00 0.00 4.02
769 770 1.111116 AAGTCGTCGGTGAGGTTCCA 61.111 55.000 0.00 0.00 0.00 3.53
814 843 4.363138 GCCCTTGCATAAAAATGTAGAGC 58.637 43.478 0.00 0.00 37.47 4.09
826 855 3.788227 ATGTAGAGCCTTGTGGTTTCA 57.212 42.857 0.00 0.00 35.27 2.69
831 860 2.108952 AGAGCCTTGTGGTTTCATCCTT 59.891 45.455 0.00 0.00 35.27 3.36
832 861 2.229784 GAGCCTTGTGGTTTCATCCTTG 59.770 50.000 0.00 0.00 35.27 3.61
833 862 1.337167 GCCTTGTGGTTTCATCCTTGC 60.337 52.381 0.00 0.00 35.27 4.01
835 864 2.629617 CCTTGTGGTTTCATCCTTGCTT 59.370 45.455 0.00 0.00 0.00 3.91
836 865 3.826157 CCTTGTGGTTTCATCCTTGCTTA 59.174 43.478 0.00 0.00 0.00 3.09
837 866 4.463891 CCTTGTGGTTTCATCCTTGCTTAT 59.536 41.667 0.00 0.00 0.00 1.73
838 867 5.652014 CCTTGTGGTTTCATCCTTGCTTATA 59.348 40.000 0.00 0.00 0.00 0.98
839 868 6.183360 CCTTGTGGTTTCATCCTTGCTTATAG 60.183 42.308 0.00 0.00 0.00 1.31
872 901 2.578495 GCACTGATTGCGTTTTCTCAG 58.422 47.619 0.00 0.00 42.79 3.35
873 902 2.031682 GCACTGATTGCGTTTTCTCAGT 60.032 45.455 0.00 0.00 46.92 3.41
943 980 0.671796 AGCACGCCACGCTATATACA 59.328 50.000 0.00 0.00 38.15 2.29
950 987 3.732169 CGCCACGCTATATACAGATGGAG 60.732 52.174 6.05 0.00 0.00 3.86
952 989 4.439426 GCCACGCTATATACAGATGGAGAG 60.439 50.000 6.05 0.00 0.00 3.20
953 990 4.944317 CCACGCTATATACAGATGGAGAGA 59.056 45.833 0.00 0.00 0.00 3.10
954 991 5.416013 CCACGCTATATACAGATGGAGAGAA 59.584 44.000 0.00 0.00 0.00 2.87
955 992 6.318628 CACGCTATATACAGATGGAGAGAAC 58.681 44.000 0.00 0.00 0.00 3.01
956 993 6.150307 CACGCTATATACAGATGGAGAGAACT 59.850 42.308 0.00 0.00 0.00 3.01
963 1007 4.678256 ACAGATGGAGAGAACTACCAAGA 58.322 43.478 0.00 0.00 37.24 3.02
966 1010 4.464597 AGATGGAGAGAACTACCAAGACAC 59.535 45.833 0.00 0.00 37.24 3.67
1021 1065 4.812476 CCGAGATCACGCCGGCAA 62.812 66.667 28.98 11.85 36.62 4.52
1050 1094 1.958069 GCTCTCCTCCTCGTCCTCTTT 60.958 57.143 0.00 0.00 0.00 2.52
1189 1233 3.858868 GACGTCAGCGCCAACAGGA 62.859 63.158 11.55 0.00 42.83 3.86
1193 1240 2.125552 CAGCGCCAACAGGATCGA 60.126 61.111 2.29 0.00 0.00 3.59
1482 1535 1.785430 GAGTTCGACACCTTCAACGAC 59.215 52.381 0.00 0.00 34.59 4.34
1644 1697 1.079543 CCTTCTGTCCCTGACGCTG 60.080 63.158 0.00 0.00 34.95 5.18
1790 1858 5.724328 TCAGCTAAGTTCATGGTACTTCAG 58.276 41.667 14.71 12.08 37.12 3.02
1970 2050 3.830744 TCGTGGGAACAAGAAGAAGAA 57.169 42.857 0.00 0.00 45.98 2.52
1971 2051 3.728845 TCGTGGGAACAAGAAGAAGAAG 58.271 45.455 0.00 0.00 45.98 2.85
1980 2060 3.249917 CAAGAAGAAGAAGCGAGAGGTC 58.750 50.000 0.00 0.00 43.76 3.85
2109 2189 1.153549 GAGGAACTTCGCGGCAGAT 60.154 57.895 6.13 0.00 41.55 2.90
2157 2237 1.079336 GGTGTACCGAGGCAACCTC 60.079 63.158 3.42 3.42 46.44 3.85
2202 2285 3.933861 ATAAAGCGGTTCTCCAAGGAT 57.066 42.857 0.00 0.00 0.00 3.24
2205 2288 0.108138 AGCGGTTCTCCAAGGATTCG 60.108 55.000 0.00 0.00 0.00 3.34
2349 2435 3.727258 ATGCCCAACCGCAGCCTA 61.727 61.111 0.00 0.00 43.26 3.93
2403 2492 1.559682 ACATGGCCGATGAGGTAAGTT 59.440 47.619 18.41 0.00 43.70 2.66
2454 2564 6.919115 TGAAATTAATCGGCATGAATCATGTG 59.081 34.615 22.50 15.86 43.10 3.21
2828 2938 0.179092 TGAGTCTGCTGCATGATCCG 60.179 55.000 1.31 0.00 0.00 4.18
2897 3019 3.787001 GGTCGGGGAGCCCTTCTG 61.787 72.222 5.38 0.00 42.67 3.02
3182 3310 0.776451 GCACACACACGTCTACTTCG 59.224 55.000 0.00 0.00 0.00 3.79
3221 3349 2.092211 CGGTTCAAAGGATTCGTCTTCG 59.908 50.000 0.00 0.00 38.55 3.79
3477 7055 4.390129 TGCCCTCCATTTTACCACTTTA 57.610 40.909 0.00 0.00 0.00 1.85
3493 7071 7.145932 ACCACTTTATCTTTTCGGAAATGAG 57.854 36.000 19.59 9.66 0.00 2.90
3539 7117 5.745227 CAACTTTACCTGGTATGAGATGGT 58.255 41.667 18.95 0.00 35.05 3.55
3605 7183 7.125113 ACAAATTGCTATGCGTTTTTGAAAAG 58.875 30.769 14.08 0.00 32.61 2.27
3644 7222 6.433847 TTGTGGGAGATTCTGAAGAAACTA 57.566 37.500 3.13 0.00 37.31 2.24
3652 7230 6.109359 AGATTCTGAAGAAACTATCAACCCG 58.891 40.000 1.35 0.00 35.75 5.28
3664 7242 7.838771 AACTATCAACCCGATACAACTAAAC 57.161 36.000 0.00 0.00 35.39 2.01
3669 7247 1.931172 CCCGATACAACTAAACTGCCG 59.069 52.381 0.00 0.00 0.00 5.69
3688 7266 2.635444 CGTCTGAAACGTTCGCAAATT 58.365 42.857 0.00 0.00 46.42 1.82
3700 7278 1.671166 GCAAATTTCAACCCCGCCT 59.329 52.632 0.00 0.00 0.00 5.52
3736 7314 5.906772 AGGATATTACGGTCATTTCCCTT 57.093 39.130 7.81 0.00 0.00 3.95
3737 7315 8.537016 CATAGGATATTACGGTCATTTCCCTTA 58.463 37.037 7.81 0.00 0.00 2.69
3738 7316 7.569599 AGGATATTACGGTCATTTCCCTTAT 57.430 36.000 7.81 0.00 0.00 1.73
3739 7317 8.674925 AGGATATTACGGTCATTTCCCTTATA 57.325 34.615 7.81 0.00 0.00 0.98
3794 7374 2.871633 CCACAATTTGGCTGGTTTGTTC 59.128 45.455 0.78 0.00 39.07 3.18
3799 7379 2.380064 TTGGCTGGTTTGTTCTGGAT 57.620 45.000 0.00 0.00 0.00 3.41
3839 7441 3.066342 CGGATGTACTATTGTCTGGACGT 59.934 47.826 0.00 0.00 0.00 4.34
3840 7442 4.439700 CGGATGTACTATTGTCTGGACGTT 60.440 45.833 0.00 0.00 0.00 3.99
3841 7443 5.220912 CGGATGTACTATTGTCTGGACGTTA 60.221 44.000 0.00 0.00 0.00 3.18
4068 7949 4.590850 ATTTTTCTTGCTTGTGTCTCCC 57.409 40.909 0.00 0.00 0.00 4.30
4090 7971 5.040635 CCGTTCATTTGTTGTTGCTTAGTT 58.959 37.500 0.00 0.00 0.00 2.24
4137 8018 6.423905 TCTTATATATTTGTTCGTGCTGGAGC 59.576 38.462 0.00 0.00 42.50 4.70
4140 8021 2.933878 TTTGTTCGTGCTGGAGCGGT 62.934 55.000 0.00 0.00 45.83 5.68
4206 8109 7.947282 TCCTTAAATTTGGGTAAGTTGACTTG 58.053 34.615 6.64 0.00 37.40 3.16
4207 8110 6.645003 CCTTAAATTTGGGTAAGTTGACTTGC 59.355 38.462 6.64 5.13 37.40 4.01
4212 8115 2.152016 GGGTAAGTTGACTTGCTGACC 58.848 52.381 10.94 8.06 38.41 4.02
4214 8117 2.480845 GTAAGTTGACTTGCTGACCGT 58.519 47.619 6.64 0.00 37.40 4.83
4215 8118 2.038387 AAGTTGACTTGCTGACCGTT 57.962 45.000 0.00 0.00 34.38 4.44
4234 8137 5.082059 CCGTTGATTCTTTGTCAAGATTCG 58.918 41.667 0.00 0.00 40.26 3.34
4235 8138 5.107104 CCGTTGATTCTTTGTCAAGATTCGA 60.107 40.000 0.00 0.00 40.26 3.71
4236 8139 6.011879 CGTTGATTCTTTGTCAAGATTCGAG 58.988 40.000 0.00 0.00 40.26 4.04
4237 8140 6.346919 CGTTGATTCTTTGTCAAGATTCGAGT 60.347 38.462 0.00 0.00 40.26 4.18
4238 8141 7.355778 GTTGATTCTTTGTCAAGATTCGAGTT 58.644 34.615 0.00 0.00 40.26 3.01
4239 8142 6.891624 TGATTCTTTGTCAAGATTCGAGTTG 58.108 36.000 0.00 0.00 40.26 3.16
4240 8143 6.483307 TGATTCTTTGTCAAGATTCGAGTTGT 59.517 34.615 4.70 0.00 40.26 3.32
4241 8144 6.677781 TTCTTTGTCAAGATTCGAGTTGTT 57.322 33.333 4.70 0.00 38.89 2.83
4242 8145 6.048073 TCTTTGTCAAGATTCGAGTTGTTG 57.952 37.500 4.70 3.44 33.80 3.33
4243 8146 5.584649 TCTTTGTCAAGATTCGAGTTGTTGT 59.415 36.000 7.05 0.00 33.80 3.32
4244 8147 5.811399 TTGTCAAGATTCGAGTTGTTGTT 57.189 34.783 7.05 0.00 0.00 2.83
4245 8148 5.811399 TGTCAAGATTCGAGTTGTTGTTT 57.189 34.783 7.05 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 8.020244 ACAAAATGTTCGCAAGTTTCAATTTTT 58.980 25.926 0.00 0.00 39.48 1.94
14 15 7.525759 ACAAAATGTTCGCAAGTTTCAATTTT 58.474 26.923 0.00 0.00 39.48 1.82
15 16 7.071014 ACAAAATGTTCGCAAGTTTCAATTT 57.929 28.000 0.00 0.00 39.48 1.82
16 17 6.660887 ACAAAATGTTCGCAAGTTTCAATT 57.339 29.167 0.00 0.00 39.48 2.32
17 18 7.763172 TTACAAAATGTTCGCAAGTTTCAAT 57.237 28.000 0.00 0.00 39.48 2.57
18 19 7.582435 TTTACAAAATGTTCGCAAGTTTCAA 57.418 28.000 0.00 0.00 39.48 2.69
19 20 7.582435 TTTTACAAAATGTTCGCAAGTTTCA 57.418 28.000 0.00 0.00 39.48 2.69
20 21 7.952637 TGTTTTTACAAAATGTTCGCAAGTTTC 59.047 29.630 0.00 0.00 39.48 2.78
21 22 7.742525 GTGTTTTTACAAAATGTTCGCAAGTTT 59.257 29.630 0.00 0.00 39.48 2.66
22 23 7.095607 TGTGTTTTTACAAAATGTTCGCAAGTT 60.096 29.630 0.00 0.00 39.48 2.66
23 24 6.366332 TGTGTTTTTACAAAATGTTCGCAAGT 59.634 30.769 0.00 0.00 39.48 3.16
24 25 6.756176 TGTGTTTTTACAAAATGTTCGCAAG 58.244 32.000 0.00 0.00 0.00 4.01
25 26 6.706055 TGTGTTTTTACAAAATGTTCGCAA 57.294 29.167 0.00 0.00 0.00 4.85
26 27 6.706055 TTGTGTTTTTACAAAATGTTCGCA 57.294 29.167 0.00 0.00 37.60 5.10
35 36 8.391075 TCCAAAATGGTTTGTGTTTTTACAAA 57.609 26.923 0.00 0.00 42.26 2.83
36 37 7.979444 TCCAAAATGGTTTGTGTTTTTACAA 57.021 28.000 0.00 0.00 42.26 2.41
37 38 7.979444 TTCCAAAATGGTTTGTGTTTTTACA 57.021 28.000 0.00 0.00 42.26 2.41
41 42 9.625747 AGATATTTCCAAAATGGTTTGTGTTTT 57.374 25.926 0.00 0.00 42.26 2.43
42 43 9.054922 CAGATATTTCCAAAATGGTTTGTGTTT 57.945 29.630 0.00 0.00 42.26 2.83
43 44 8.210265 ACAGATATTTCCAAAATGGTTTGTGTT 58.790 29.630 0.00 0.00 42.26 3.32
44 45 7.734942 ACAGATATTTCCAAAATGGTTTGTGT 58.265 30.769 0.00 0.00 42.26 3.72
45 46 7.331687 GGACAGATATTTCCAAAATGGTTTGTG 59.668 37.037 0.00 0.00 42.26 3.33
46 47 7.235399 AGGACAGATATTTCCAAAATGGTTTGT 59.765 33.333 0.00 0.00 42.26 2.83
47 48 7.614494 AGGACAGATATTTCCAAAATGGTTTG 58.386 34.615 0.00 0.00 43.26 2.93
48 49 7.797121 AGGACAGATATTTCCAAAATGGTTT 57.203 32.000 0.00 0.00 39.03 3.27
49 50 7.797121 AAGGACAGATATTTCCAAAATGGTT 57.203 32.000 0.00 0.00 39.03 3.67
50 51 7.797121 AAAGGACAGATATTTCCAAAATGGT 57.203 32.000 0.00 0.00 39.03 3.55
186 187 9.605275 CCTTTCCTTTTTCTTTTCTCATTTCTT 57.395 29.630 0.00 0.00 0.00 2.52
187 188 8.981659 TCCTTTCCTTTTTCTTTTCTCATTTCT 58.018 29.630 0.00 0.00 0.00 2.52
188 189 9.599866 TTCCTTTCCTTTTTCTTTTCTCATTTC 57.400 29.630 0.00 0.00 0.00 2.17
189 190 9.383519 GTTCCTTTCCTTTTTCTTTTCTCATTT 57.616 29.630 0.00 0.00 0.00 2.32
190 191 7.987458 GGTTCCTTTCCTTTTTCTTTTCTCATT 59.013 33.333 0.00 0.00 0.00 2.57
191 192 7.125659 TGGTTCCTTTCCTTTTTCTTTTCTCAT 59.874 33.333 0.00 0.00 0.00 2.90
192 193 6.439058 TGGTTCCTTTCCTTTTTCTTTTCTCA 59.561 34.615 0.00 0.00 0.00 3.27
193 194 6.873997 TGGTTCCTTTCCTTTTTCTTTTCTC 58.126 36.000 0.00 0.00 0.00 2.87
194 195 6.440647 ACTGGTTCCTTTCCTTTTTCTTTTCT 59.559 34.615 0.00 0.00 0.00 2.52
195 196 6.535150 CACTGGTTCCTTTCCTTTTTCTTTTC 59.465 38.462 0.00 0.00 0.00 2.29
196 197 6.212589 TCACTGGTTCCTTTCCTTTTTCTTTT 59.787 34.615 0.00 0.00 0.00 2.27
197 198 5.719563 TCACTGGTTCCTTTCCTTTTTCTTT 59.280 36.000 0.00 0.00 0.00 2.52
198 199 5.269189 TCACTGGTTCCTTTCCTTTTTCTT 58.731 37.500 0.00 0.00 0.00 2.52
199 200 4.867086 TCACTGGTTCCTTTCCTTTTTCT 58.133 39.130 0.00 0.00 0.00 2.52
200 201 5.301805 TCATCACTGGTTCCTTTCCTTTTTC 59.698 40.000 0.00 0.00 0.00 2.29
201 202 5.208121 TCATCACTGGTTCCTTTCCTTTTT 58.792 37.500 0.00 0.00 0.00 1.94
202 203 4.803452 TCATCACTGGTTCCTTTCCTTTT 58.197 39.130 0.00 0.00 0.00 2.27
203 204 4.453480 TCATCACTGGTTCCTTTCCTTT 57.547 40.909 0.00 0.00 0.00 3.11
204 205 4.104738 TCTTCATCACTGGTTCCTTTCCTT 59.895 41.667 0.00 0.00 0.00 3.36
205 206 3.652869 TCTTCATCACTGGTTCCTTTCCT 59.347 43.478 0.00 0.00 0.00 3.36
206 207 4.021102 TCTTCATCACTGGTTCCTTTCC 57.979 45.455 0.00 0.00 0.00 3.13
207 208 6.263168 TCTTTTCTTCATCACTGGTTCCTTTC 59.737 38.462 0.00 0.00 0.00 2.62
208 209 6.129179 TCTTTTCTTCATCACTGGTTCCTTT 58.871 36.000 0.00 0.00 0.00 3.11
209 210 5.694995 TCTTTTCTTCATCACTGGTTCCTT 58.305 37.500 0.00 0.00 0.00 3.36
210 211 5.310409 TCTTTTCTTCATCACTGGTTCCT 57.690 39.130 0.00 0.00 0.00 3.36
211 212 6.391227 TTTCTTTTCTTCATCACTGGTTCC 57.609 37.500 0.00 0.00 0.00 3.62
212 213 7.707104 TCTTTTCTTTTCTTCATCACTGGTTC 58.293 34.615 0.00 0.00 0.00 3.62
213 214 7.645058 TCTTTTCTTTTCTTCATCACTGGTT 57.355 32.000 0.00 0.00 0.00 3.67
214 215 7.645058 TTCTTTTCTTTTCTTCATCACTGGT 57.355 32.000 0.00 0.00 0.00 4.00
215 216 8.931385 TTTTCTTTTCTTTTCTTCATCACTGG 57.069 30.769 0.00 0.00 0.00 4.00
258 259 6.986231 CCAGGTAGCACAATTTCTTTCTTTTT 59.014 34.615 0.00 0.00 0.00 1.94
259 260 6.515832 CCAGGTAGCACAATTTCTTTCTTTT 58.484 36.000 0.00 0.00 0.00 2.27
260 261 5.509670 GCCAGGTAGCACAATTTCTTTCTTT 60.510 40.000 0.00 0.00 0.00 2.52
261 262 4.021981 GCCAGGTAGCACAATTTCTTTCTT 60.022 41.667 0.00 0.00 0.00 2.52
262 263 3.507622 GCCAGGTAGCACAATTTCTTTCT 59.492 43.478 0.00 0.00 0.00 2.52
263 264 3.367395 GGCCAGGTAGCACAATTTCTTTC 60.367 47.826 0.00 0.00 0.00 2.62
264 265 2.562738 GGCCAGGTAGCACAATTTCTTT 59.437 45.455 0.00 0.00 0.00 2.52
265 266 2.171003 GGCCAGGTAGCACAATTTCTT 58.829 47.619 0.00 0.00 0.00 2.52
266 267 1.075374 TGGCCAGGTAGCACAATTTCT 59.925 47.619 0.00 0.00 0.00 2.52
267 268 1.544724 TGGCCAGGTAGCACAATTTC 58.455 50.000 0.00 0.00 0.00 2.17
268 269 1.618343 GTTGGCCAGGTAGCACAATTT 59.382 47.619 5.11 0.00 0.00 1.82
269 270 1.203050 AGTTGGCCAGGTAGCACAATT 60.203 47.619 5.11 0.00 0.00 2.32
270 271 0.405585 AGTTGGCCAGGTAGCACAAT 59.594 50.000 5.11 0.00 0.00 2.71
271 272 0.184933 AAGTTGGCCAGGTAGCACAA 59.815 50.000 5.11 0.00 0.00 3.33
272 273 0.537143 CAAGTTGGCCAGGTAGCACA 60.537 55.000 5.11 0.00 0.00 4.57
273 274 0.250727 TCAAGTTGGCCAGGTAGCAC 60.251 55.000 5.11 0.00 0.00 4.40
274 275 0.698238 ATCAAGTTGGCCAGGTAGCA 59.302 50.000 5.11 0.00 0.00 3.49
275 276 1.839424 AATCAAGTTGGCCAGGTAGC 58.161 50.000 5.11 0.00 0.00 3.58
276 277 6.174720 TCTATAATCAAGTTGGCCAGGTAG 57.825 41.667 5.11 0.00 0.00 3.18
277 278 5.665812 ACTCTATAATCAAGTTGGCCAGGTA 59.334 40.000 5.11 0.00 0.00 3.08
278 279 4.475016 ACTCTATAATCAAGTTGGCCAGGT 59.525 41.667 5.11 0.00 0.00 4.00
279 280 5.041191 ACTCTATAATCAAGTTGGCCAGG 57.959 43.478 5.11 0.00 0.00 4.45
280 281 6.821388 AGTACTCTATAATCAAGTTGGCCAG 58.179 40.000 5.11 0.00 0.00 4.85
281 282 6.183360 GGAGTACTCTATAATCAAGTTGGCCA 60.183 42.308 21.88 0.00 0.00 5.36
282 283 6.042208 AGGAGTACTCTATAATCAAGTTGGCC 59.958 42.308 21.88 0.00 0.00 5.36
283 284 7.056844 AGGAGTACTCTATAATCAAGTTGGC 57.943 40.000 21.88 0.09 0.00 4.52
284 285 9.357161 AGTAGGAGTACTCTATAATCAAGTTGG 57.643 37.037 21.88 0.00 34.00 3.77
318 319 9.768662 AATAAAGCTTCACATGATTGTCTTTTT 57.231 25.926 0.00 0.00 32.34 1.94
319 320 9.199982 CAATAAAGCTTCACATGATTGTCTTTT 57.800 29.630 0.00 0.00 32.34 2.27
320 321 8.579006 TCAATAAAGCTTCACATGATTGTCTTT 58.421 29.630 0.00 6.05 32.34 2.52
321 322 8.114331 TCAATAAAGCTTCACATGATTGTCTT 57.886 30.769 0.00 0.00 32.34 3.01
322 323 7.692460 TCAATAAAGCTTCACATGATTGTCT 57.308 32.000 0.00 0.00 32.34 3.41
323 324 8.922058 ATTCAATAAAGCTTCACATGATTGTC 57.078 30.769 0.00 0.00 32.34 3.18
324 325 7.699391 CGATTCAATAAAGCTTCACATGATTGT 59.301 33.333 0.00 0.00 36.15 2.71
325 326 7.699391 ACGATTCAATAAAGCTTCACATGATTG 59.301 33.333 0.00 3.96 0.00 2.67
326 327 7.765307 ACGATTCAATAAAGCTTCACATGATT 58.235 30.769 0.00 0.00 0.00 2.57
327 328 7.066163 TGACGATTCAATAAAGCTTCACATGAT 59.934 33.333 0.00 0.00 27.84 2.45
328 329 6.371271 TGACGATTCAATAAAGCTTCACATGA 59.629 34.615 0.00 0.00 27.84 3.07
329 330 6.467047 GTGACGATTCAATAAAGCTTCACATG 59.533 38.462 0.00 0.00 46.22 3.21
330 331 6.546395 GTGACGATTCAATAAAGCTTCACAT 58.454 36.000 0.00 0.00 46.22 3.21
331 332 5.927030 GTGACGATTCAATAAAGCTTCACA 58.073 37.500 0.00 0.00 46.22 3.58
332 333 5.927030 TGTGACGATTCAATAAAGCTTCAC 58.073 37.500 0.00 0.00 46.78 3.18
333 334 6.552859 TTGTGACGATTCAATAAAGCTTCA 57.447 33.333 0.00 0.00 30.07 3.02
334 335 7.023575 ACATTGTGACGATTCAATAAAGCTTC 58.976 34.615 0.00 0.00 33.69 3.86
335 336 6.913170 ACATTGTGACGATTCAATAAAGCTT 58.087 32.000 0.00 0.00 33.69 3.74
336 337 6.500684 ACATTGTGACGATTCAATAAAGCT 57.499 33.333 0.00 0.00 33.69 3.74
337 338 7.566858 AAACATTGTGACGATTCAATAAAGC 57.433 32.000 0.00 0.00 33.69 3.51
338 339 9.605955 TGTAAACATTGTGACGATTCAATAAAG 57.394 29.630 0.00 0.00 33.69 1.85
339 340 9.605955 CTGTAAACATTGTGACGATTCAATAAA 57.394 29.630 0.00 0.00 33.69 1.40
340 341 8.779303 ACTGTAAACATTGTGACGATTCAATAA 58.221 29.630 0.00 0.00 33.69 1.40
341 342 8.227119 CACTGTAAACATTGTGACGATTCAATA 58.773 33.333 0.00 0.00 33.69 1.90
342 343 7.041440 TCACTGTAAACATTGTGACGATTCAAT 60.041 33.333 0.00 0.00 34.94 2.57
343 344 6.258947 TCACTGTAAACATTGTGACGATTCAA 59.741 34.615 0.00 0.00 34.94 2.69
344 345 5.755861 TCACTGTAAACATTGTGACGATTCA 59.244 36.000 0.00 0.00 34.94 2.57
345 346 6.223138 TCACTGTAAACATTGTGACGATTC 57.777 37.500 0.00 0.00 34.94 2.52
346 347 6.426633 TCATCACTGTAAACATTGTGACGATT 59.573 34.615 7.18 0.00 41.37 3.34
347 348 5.931724 TCATCACTGTAAACATTGTGACGAT 59.068 36.000 7.18 0.00 41.37 3.73
348 349 5.293560 TCATCACTGTAAACATTGTGACGA 58.706 37.500 7.18 3.18 41.37 4.20
349 350 5.590104 TCATCACTGTAAACATTGTGACG 57.410 39.130 7.18 1.14 41.37 4.35
350 351 9.891828 TTAATTCATCACTGTAAACATTGTGAC 57.108 29.630 7.18 0.00 41.37 3.67
376 377 9.579610 CGAATCATTTTCGCAAAAATAAAACTT 57.420 25.926 0.00 0.00 41.96 2.66
377 378 8.220434 CCGAATCATTTTCGCAAAAATAAAACT 58.780 29.630 0.00 0.00 41.96 2.66
378 379 8.217778 TCCGAATCATTTTCGCAAAAATAAAAC 58.782 29.630 0.00 0.00 41.96 2.43
379 380 8.299262 TCCGAATCATTTTCGCAAAAATAAAA 57.701 26.923 0.00 0.00 41.96 1.52
380 381 7.875316 TCCGAATCATTTTCGCAAAAATAAA 57.125 28.000 0.00 0.00 41.96 1.40
381 382 7.221838 GGATCCGAATCATTTTCGCAAAAATAA 59.778 33.333 0.00 0.00 41.96 1.40
382 383 6.695278 GGATCCGAATCATTTTCGCAAAAATA 59.305 34.615 0.00 0.00 41.96 1.40
383 384 5.519927 GGATCCGAATCATTTTCGCAAAAAT 59.480 36.000 0.00 0.00 44.12 1.82
384 385 4.862018 GGATCCGAATCATTTTCGCAAAAA 59.138 37.500 0.00 0.00 40.30 1.94
385 386 4.082517 TGGATCCGAATCATTTTCGCAAAA 60.083 37.500 7.39 0.00 40.30 2.44
386 387 3.441922 TGGATCCGAATCATTTTCGCAAA 59.558 39.130 7.39 0.00 40.30 3.68
387 388 3.013219 TGGATCCGAATCATTTTCGCAA 58.987 40.909 7.39 0.00 40.30 4.85
388 389 2.637947 TGGATCCGAATCATTTTCGCA 58.362 42.857 7.39 0.00 40.30 5.10
389 390 3.904136 ATGGATCCGAATCATTTTCGC 57.096 42.857 7.39 0.00 40.30 4.70
390 391 7.132694 TGATAATGGATCCGAATCATTTTCG 57.867 36.000 15.74 0.94 41.21 3.46
391 392 9.403110 CTTTGATAATGGATCCGAATCATTTTC 57.597 33.333 18.78 12.21 33.07 2.29
392 393 8.917088 ACTTTGATAATGGATCCGAATCATTTT 58.083 29.630 18.78 4.85 33.07 1.82
393 394 8.469309 ACTTTGATAATGGATCCGAATCATTT 57.531 30.769 18.78 8.11 33.07 2.32
394 395 8.469309 AACTTTGATAATGGATCCGAATCATT 57.531 30.769 18.78 10.66 33.07 2.57
395 396 7.720957 TGAACTTTGATAATGGATCCGAATCAT 59.279 33.333 18.78 8.51 33.07 2.45
396 397 7.053498 TGAACTTTGATAATGGATCCGAATCA 58.947 34.615 15.74 15.74 33.07 2.57
397 398 7.496529 TGAACTTTGATAATGGATCCGAATC 57.503 36.000 7.39 10.17 33.07 2.52
398 399 6.016777 GCTGAACTTTGATAATGGATCCGAAT 60.017 38.462 7.39 0.00 33.07 3.34
399 400 5.296780 GCTGAACTTTGATAATGGATCCGAA 59.703 40.000 7.39 0.00 33.07 4.30
400 401 4.816385 GCTGAACTTTGATAATGGATCCGA 59.184 41.667 7.39 0.00 33.07 4.55
401 402 4.319046 CGCTGAACTTTGATAATGGATCCG 60.319 45.833 7.39 0.00 33.07 4.18
402 403 4.816385 TCGCTGAACTTTGATAATGGATCC 59.184 41.667 4.20 4.20 33.07 3.36
403 404 5.991328 TCGCTGAACTTTGATAATGGATC 57.009 39.130 0.00 0.00 34.84 3.36
404 405 5.297776 CCTTCGCTGAACTTTGATAATGGAT 59.702 40.000 0.00 0.00 0.00 3.41
405 406 4.635765 CCTTCGCTGAACTTTGATAATGGA 59.364 41.667 0.00 0.00 0.00 3.41
406 407 4.396166 ACCTTCGCTGAACTTTGATAATGG 59.604 41.667 0.00 0.00 0.00 3.16
407 408 5.551760 ACCTTCGCTGAACTTTGATAATG 57.448 39.130 0.00 0.00 0.00 1.90
408 409 6.170506 TGTACCTTCGCTGAACTTTGATAAT 58.829 36.000 0.00 0.00 0.00 1.28
409 410 5.543714 TGTACCTTCGCTGAACTTTGATAA 58.456 37.500 0.00 0.00 0.00 1.75
410 411 5.142061 TGTACCTTCGCTGAACTTTGATA 57.858 39.130 0.00 0.00 0.00 2.15
411 412 4.002906 TGTACCTTCGCTGAACTTTGAT 57.997 40.909 0.00 0.00 0.00 2.57
412 413 3.462483 TGTACCTTCGCTGAACTTTGA 57.538 42.857 0.00 0.00 0.00 2.69
413 414 4.527564 CTTTGTACCTTCGCTGAACTTTG 58.472 43.478 0.00 0.00 0.00 2.77
414 415 3.003378 GCTTTGTACCTTCGCTGAACTTT 59.997 43.478 0.00 0.00 0.00 2.66
415 416 2.548480 GCTTTGTACCTTCGCTGAACTT 59.452 45.455 0.00 0.00 0.00 2.66
416 417 2.143925 GCTTTGTACCTTCGCTGAACT 58.856 47.619 0.00 0.00 0.00 3.01
417 418 1.871039 TGCTTTGTACCTTCGCTGAAC 59.129 47.619 0.00 0.00 0.00 3.18
418 419 2.248280 TGCTTTGTACCTTCGCTGAA 57.752 45.000 0.00 0.00 0.00 3.02
419 420 2.028112 AGATGCTTTGTACCTTCGCTGA 60.028 45.455 0.00 0.00 0.00 4.26
420 421 2.349886 GAGATGCTTTGTACCTTCGCTG 59.650 50.000 0.00 0.00 0.00 5.18
421 422 2.622436 GAGATGCTTTGTACCTTCGCT 58.378 47.619 0.00 0.00 0.00 4.93
422 423 1.324736 CGAGATGCTTTGTACCTTCGC 59.675 52.381 0.00 0.00 0.00 4.70
423 424 2.876091 TCGAGATGCTTTGTACCTTCG 58.124 47.619 0.00 0.00 0.00 3.79
424 425 5.607119 TTTTCGAGATGCTTTGTACCTTC 57.393 39.130 0.00 0.00 0.00 3.46
425 426 6.879458 ACTATTTTCGAGATGCTTTGTACCTT 59.121 34.615 0.00 0.00 0.00 3.50
426 427 6.407202 ACTATTTTCGAGATGCTTTGTACCT 58.593 36.000 0.00 0.00 0.00 3.08
427 428 6.663944 ACTATTTTCGAGATGCTTTGTACC 57.336 37.500 0.00 0.00 0.00 3.34
459 460 6.827586 TGGTCATTATGTTTTGGTTAGACC 57.172 37.500 0.00 0.00 42.44 3.85
460 461 7.882179 AGTTGGTCATTATGTTTTGGTTAGAC 58.118 34.615 0.00 0.00 0.00 2.59
461 462 7.175990 GGAGTTGGTCATTATGTTTTGGTTAGA 59.824 37.037 0.00 0.00 0.00 2.10
462 463 7.176690 AGGAGTTGGTCATTATGTTTTGGTTAG 59.823 37.037 0.00 0.00 0.00 2.34
463 464 7.007723 AGGAGTTGGTCATTATGTTTTGGTTA 58.992 34.615 0.00 0.00 0.00 2.85
464 465 5.838521 AGGAGTTGGTCATTATGTTTTGGTT 59.161 36.000 0.00 0.00 0.00 3.67
465 466 5.393866 AGGAGTTGGTCATTATGTTTTGGT 58.606 37.500 0.00 0.00 0.00 3.67
466 467 5.982890 AGGAGTTGGTCATTATGTTTTGG 57.017 39.130 0.00 0.00 0.00 3.28
467 468 7.687941 ACTAGGAGTTGGTCATTATGTTTTG 57.312 36.000 0.00 0.00 0.00 2.44
482 483 4.848357 AGCATGCATTACAACTAGGAGTT 58.152 39.130 21.98 0.00 39.39 3.01
483 484 4.494091 AGCATGCATTACAACTAGGAGT 57.506 40.909 21.98 0.00 0.00 3.85
484 485 4.877823 TGAAGCATGCATTACAACTAGGAG 59.122 41.667 21.98 0.00 0.00 3.69
485 486 4.635765 GTGAAGCATGCATTACAACTAGGA 59.364 41.667 21.98 0.00 0.00 2.94
486 487 4.637534 AGTGAAGCATGCATTACAACTAGG 59.362 41.667 21.98 0.00 0.00 3.02
487 488 5.808042 AGTGAAGCATGCATTACAACTAG 57.192 39.130 21.98 0.00 0.00 2.57
488 489 6.639563 TCTAGTGAAGCATGCATTACAACTA 58.360 36.000 21.98 15.72 0.00 2.24
489 490 5.491070 TCTAGTGAAGCATGCATTACAACT 58.509 37.500 21.98 15.44 0.00 3.16
490 491 5.801350 TCTAGTGAAGCATGCATTACAAC 57.199 39.130 21.98 8.97 0.00 3.32
491 492 8.562052 CATAATCTAGTGAAGCATGCATTACAA 58.438 33.333 21.98 5.34 0.00 2.41
492 493 7.933033 TCATAATCTAGTGAAGCATGCATTACA 59.067 33.333 21.98 10.94 0.00 2.41
493 494 8.315391 TCATAATCTAGTGAAGCATGCATTAC 57.685 34.615 21.98 15.31 0.00 1.89
494 495 7.118825 GCTCATAATCTAGTGAAGCATGCATTA 59.881 37.037 21.98 12.32 0.00 1.90
495 496 6.072618 GCTCATAATCTAGTGAAGCATGCATT 60.073 38.462 21.98 11.23 0.00 3.56
496 497 5.411977 GCTCATAATCTAGTGAAGCATGCAT 59.588 40.000 21.98 8.13 0.00 3.96
497 498 4.753610 GCTCATAATCTAGTGAAGCATGCA 59.246 41.667 21.98 0.00 0.00 3.96
498 499 4.153835 GGCTCATAATCTAGTGAAGCATGC 59.846 45.833 10.51 10.51 0.00 4.06
499 500 5.549347 AGGCTCATAATCTAGTGAAGCATG 58.451 41.667 0.00 0.00 0.00 4.06
500 501 5.306419 TGAGGCTCATAATCTAGTGAAGCAT 59.694 40.000 14.43 0.00 0.00 3.79
501 502 4.651045 TGAGGCTCATAATCTAGTGAAGCA 59.349 41.667 14.43 0.00 0.00 3.91
502 503 5.207110 TGAGGCTCATAATCTAGTGAAGC 57.793 43.478 14.43 0.00 0.00 3.86
503 504 8.674263 ATTTTGAGGCTCATAATCTAGTGAAG 57.326 34.615 22.41 0.00 0.00 3.02
504 505 9.113838 GAATTTTGAGGCTCATAATCTAGTGAA 57.886 33.333 26.31 9.63 28.96 3.18
505 506 8.267183 TGAATTTTGAGGCTCATAATCTAGTGA 58.733 33.333 26.31 8.75 28.96 3.41
506 507 8.442632 TGAATTTTGAGGCTCATAATCTAGTG 57.557 34.615 26.31 0.00 28.96 2.74
507 508 9.466497 TTTGAATTTTGAGGCTCATAATCTAGT 57.534 29.630 26.31 15.11 28.96 2.57
508 509 9.727627 GTTTGAATTTTGAGGCTCATAATCTAG 57.272 33.333 26.31 0.00 28.96 2.43
509 510 9.466497 AGTTTGAATTTTGAGGCTCATAATCTA 57.534 29.630 26.31 17.90 28.96 1.98
510 511 8.358582 AGTTTGAATTTTGAGGCTCATAATCT 57.641 30.769 26.31 18.11 28.96 2.40
511 512 7.704047 GGAGTTTGAATTTTGAGGCTCATAATC 59.296 37.037 26.31 20.39 28.96 1.75
512 513 7.398332 AGGAGTTTGAATTTTGAGGCTCATAAT 59.602 33.333 22.41 22.41 31.02 1.28
513 514 6.721208 AGGAGTTTGAATTTTGAGGCTCATAA 59.279 34.615 19.50 19.88 0.00 1.90
514 515 6.248433 AGGAGTTTGAATTTTGAGGCTCATA 58.752 36.000 19.50 11.19 0.00 2.15
515 516 5.082425 AGGAGTTTGAATTTTGAGGCTCAT 58.918 37.500 19.50 2.42 0.00 2.90
516 517 4.473444 AGGAGTTTGAATTTTGAGGCTCA 58.527 39.130 14.43 14.43 0.00 4.26
517 518 6.575162 TTAGGAGTTTGAATTTTGAGGCTC 57.425 37.500 7.79 7.79 0.00 4.70
518 519 6.551227 AGTTTAGGAGTTTGAATTTTGAGGCT 59.449 34.615 0.00 0.00 0.00 4.58
519 520 6.749139 AGTTTAGGAGTTTGAATTTTGAGGC 58.251 36.000 0.00 0.00 0.00 4.70
520 521 7.940850 TGAGTTTAGGAGTTTGAATTTTGAGG 58.059 34.615 0.00 0.00 0.00 3.86
521 522 9.403110 CATGAGTTTAGGAGTTTGAATTTTGAG 57.597 33.333 0.00 0.00 0.00 3.02
522 523 8.359642 CCATGAGTTTAGGAGTTTGAATTTTGA 58.640 33.333 0.00 0.00 0.00 2.69
523 524 8.359642 TCCATGAGTTTAGGAGTTTGAATTTTG 58.640 33.333 0.00 0.00 0.00 2.44
524 525 8.477419 TCCATGAGTTTAGGAGTTTGAATTTT 57.523 30.769 0.00 0.00 0.00 1.82
525 526 8.655935 ATCCATGAGTTTAGGAGTTTGAATTT 57.344 30.769 0.00 0.00 34.40 1.82
526 527 9.753674 TTATCCATGAGTTTAGGAGTTTGAATT 57.246 29.630 0.00 0.00 34.40 2.17
527 528 9.753674 TTTATCCATGAGTTTAGGAGTTTGAAT 57.246 29.630 0.00 0.00 34.40 2.57
528 529 9.581289 TTTTATCCATGAGTTTAGGAGTTTGAA 57.419 29.630 0.00 0.00 34.40 2.69
529 530 9.010029 GTTTTATCCATGAGTTTAGGAGTTTGA 57.990 33.333 0.00 0.00 34.40 2.69
530 531 9.014297 AGTTTTATCCATGAGTTTAGGAGTTTG 57.986 33.333 0.00 0.00 34.40 2.93
532 533 9.668497 GTAGTTTTATCCATGAGTTTAGGAGTT 57.332 33.333 0.00 0.00 34.40 3.01
533 534 8.822805 TGTAGTTTTATCCATGAGTTTAGGAGT 58.177 33.333 0.00 0.00 34.40 3.85
534 535 9.838339 ATGTAGTTTTATCCATGAGTTTAGGAG 57.162 33.333 0.00 0.00 34.40 3.69
566 567 9.220767 GAAATCATGAAGTACTCTGGTAGTTTT 57.779 33.333 0.00 0.00 40.46 2.43
567 568 8.375506 TGAAATCATGAAGTACTCTGGTAGTTT 58.624 33.333 0.00 0.00 40.46 2.66
568 569 7.907389 TGAAATCATGAAGTACTCTGGTAGTT 58.093 34.615 0.00 0.00 42.33 2.24
569 570 7.482169 TGAAATCATGAAGTACTCTGGTAGT 57.518 36.000 0.00 0.00 42.62 2.73
590 591 9.929722 GTCATTTACGATGCTATTTTACATGAA 57.070 29.630 0.00 0.00 0.00 2.57
591 592 9.325198 AGTCATTTACGATGCTATTTTACATGA 57.675 29.630 0.00 0.00 0.00 3.07
592 593 9.935682 AAGTCATTTACGATGCTATTTTACATG 57.064 29.630 0.00 0.00 0.00 3.21
594 595 9.157104 TGAAGTCATTTACGATGCTATTTTACA 57.843 29.630 0.00 0.00 0.00 2.41
597 598 9.722056 GAATGAAGTCATTTACGATGCTATTTT 57.278 29.630 7.91 0.00 45.72 1.82
598 599 9.113838 AGAATGAAGTCATTTACGATGCTATTT 57.886 29.630 7.91 0.00 45.72 1.40
599 600 8.668510 AGAATGAAGTCATTTACGATGCTATT 57.331 30.769 7.91 0.00 45.72 1.73
600 601 8.668510 AAGAATGAAGTCATTTACGATGCTAT 57.331 30.769 7.91 0.00 45.72 2.97
601 602 7.981789 AGAAGAATGAAGTCATTTACGATGCTA 59.018 33.333 7.91 0.00 45.72 3.49
602 603 6.820656 AGAAGAATGAAGTCATTTACGATGCT 59.179 34.615 7.91 0.00 45.72 3.79
603 604 6.904011 CAGAAGAATGAAGTCATTTACGATGC 59.096 38.462 7.91 0.00 45.72 3.91
604 605 6.904011 GCAGAAGAATGAAGTCATTTACGATG 59.096 38.462 7.91 5.71 45.72 3.84
605 606 6.820656 AGCAGAAGAATGAAGTCATTTACGAT 59.179 34.615 7.91 0.00 45.72 3.73
606 607 6.166279 AGCAGAAGAATGAAGTCATTTACGA 58.834 36.000 7.91 0.00 45.72 3.43
607 608 6.414408 AGCAGAAGAATGAAGTCATTTACG 57.586 37.500 7.91 0.00 45.72 3.18
608 609 7.748241 GTCAAGCAGAAGAATGAAGTCATTTAC 59.252 37.037 7.91 3.77 45.72 2.01
609 610 7.445096 TGTCAAGCAGAAGAATGAAGTCATTTA 59.555 33.333 7.91 0.00 45.72 1.40
610 611 6.263842 TGTCAAGCAGAAGAATGAAGTCATTT 59.736 34.615 7.91 0.00 45.72 2.32
612 613 5.180868 GTGTCAAGCAGAAGAATGAAGTCAT 59.819 40.000 0.00 0.00 38.41 3.06
613 614 4.512944 GTGTCAAGCAGAAGAATGAAGTCA 59.487 41.667 0.00 0.00 0.00 3.41
614 615 4.083590 GGTGTCAAGCAGAAGAATGAAGTC 60.084 45.833 0.00 0.00 0.00 3.01
615 616 3.817647 GGTGTCAAGCAGAAGAATGAAGT 59.182 43.478 0.00 0.00 0.00 3.01
616 617 3.817084 TGGTGTCAAGCAGAAGAATGAAG 59.183 43.478 0.00 0.00 0.00 3.02
617 618 3.565482 GTGGTGTCAAGCAGAAGAATGAA 59.435 43.478 0.00 0.00 33.61 2.57
618 619 3.141398 GTGGTGTCAAGCAGAAGAATGA 58.859 45.455 0.00 0.00 33.61 2.57
619 620 2.227388 GGTGGTGTCAAGCAGAAGAATG 59.773 50.000 0.00 0.00 33.61 2.67
620 621 2.107204 AGGTGGTGTCAAGCAGAAGAAT 59.893 45.455 0.00 0.00 33.61 2.40
621 622 1.490490 AGGTGGTGTCAAGCAGAAGAA 59.510 47.619 0.00 0.00 33.61 2.52
622 623 1.131638 AGGTGGTGTCAAGCAGAAGA 58.868 50.000 0.00 0.00 33.61 2.87
623 624 1.605710 CAAGGTGGTGTCAAGCAGAAG 59.394 52.381 0.00 0.00 33.61 2.85
624 625 1.679139 CAAGGTGGTGTCAAGCAGAA 58.321 50.000 0.00 0.00 33.61 3.02
625 626 0.819259 GCAAGGTGGTGTCAAGCAGA 60.819 55.000 0.00 0.00 33.61 4.26
626 627 1.102809 TGCAAGGTGGTGTCAAGCAG 61.103 55.000 0.00 0.00 33.61 4.24
627 628 0.682532 TTGCAAGGTGGTGTCAAGCA 60.683 50.000 0.00 0.00 0.00 3.91
628 629 0.675633 ATTGCAAGGTGGTGTCAAGC 59.324 50.000 4.94 0.00 0.00 4.01
629 630 3.674138 GCATATTGCAAGGTGGTGTCAAG 60.674 47.826 4.94 0.00 44.26 3.02
630 631 2.230992 GCATATTGCAAGGTGGTGTCAA 59.769 45.455 4.94 0.00 44.26 3.18
631 632 1.818060 GCATATTGCAAGGTGGTGTCA 59.182 47.619 4.94 0.00 44.26 3.58
632 633 2.566952 GCATATTGCAAGGTGGTGTC 57.433 50.000 4.94 0.00 44.26 3.67
643 644 3.653539 TCCATTCATGCAGCATATTGC 57.346 42.857 7.82 0.00 45.46 3.56
644 645 5.538118 ACATTCCATTCATGCAGCATATTG 58.462 37.500 7.82 6.03 0.00 1.90
645 646 5.801531 ACATTCCATTCATGCAGCATATT 57.198 34.783 7.82 0.00 0.00 1.28
646 647 5.417894 CCTACATTCCATTCATGCAGCATAT 59.582 40.000 7.82 0.00 0.00 1.78
647 648 4.763279 CCTACATTCCATTCATGCAGCATA 59.237 41.667 7.82 0.00 0.00 3.14
648 649 3.572682 CCTACATTCCATTCATGCAGCAT 59.427 43.478 0.52 0.52 0.00 3.79
649 650 2.953648 CCTACATTCCATTCATGCAGCA 59.046 45.455 0.00 0.00 0.00 4.41
650 651 2.954318 ACCTACATTCCATTCATGCAGC 59.046 45.455 0.00 0.00 0.00 5.25
651 652 4.641541 TGAACCTACATTCCATTCATGCAG 59.358 41.667 0.00 0.00 0.00 4.41
652 653 4.598022 TGAACCTACATTCCATTCATGCA 58.402 39.130 0.00 0.00 0.00 3.96
653 654 4.883585 TCTGAACCTACATTCCATTCATGC 59.116 41.667 0.00 0.00 0.00 4.06
654 655 8.681486 TTATCTGAACCTACATTCCATTCATG 57.319 34.615 0.00 0.00 0.00 3.07
655 656 9.347240 CTTTATCTGAACCTACATTCCATTCAT 57.653 33.333 0.00 0.00 0.00 2.57
656 657 8.548025 TCTTTATCTGAACCTACATTCCATTCA 58.452 33.333 0.00 0.00 0.00 2.57
657 658 8.964476 TCTTTATCTGAACCTACATTCCATTC 57.036 34.615 0.00 0.00 0.00 2.67
658 659 7.995488 CCTCTTTATCTGAACCTACATTCCATT 59.005 37.037 0.00 0.00 0.00 3.16
659 660 7.512992 CCTCTTTATCTGAACCTACATTCCAT 58.487 38.462 0.00 0.00 0.00 3.41
660 661 6.632672 GCCTCTTTATCTGAACCTACATTCCA 60.633 42.308 0.00 0.00 0.00 3.53
661 662 5.760743 GCCTCTTTATCTGAACCTACATTCC 59.239 44.000 0.00 0.00 0.00 3.01
662 663 5.463724 CGCCTCTTTATCTGAACCTACATTC 59.536 44.000 0.00 0.00 0.00 2.67
663 664 5.360591 CGCCTCTTTATCTGAACCTACATT 58.639 41.667 0.00 0.00 0.00 2.71
664 665 4.202264 CCGCCTCTTTATCTGAACCTACAT 60.202 45.833 0.00 0.00 0.00 2.29
665 666 3.132289 CCGCCTCTTTATCTGAACCTACA 59.868 47.826 0.00 0.00 0.00 2.74
666 667 3.383825 TCCGCCTCTTTATCTGAACCTAC 59.616 47.826 0.00 0.00 0.00 3.18
667 668 3.637229 CTCCGCCTCTTTATCTGAACCTA 59.363 47.826 0.00 0.00 0.00 3.08
668 669 2.432510 CTCCGCCTCTTTATCTGAACCT 59.567 50.000 0.00 0.00 0.00 3.50
669 670 2.483889 CCTCCGCCTCTTTATCTGAACC 60.484 54.545 0.00 0.00 0.00 3.62
670 671 2.483889 CCCTCCGCCTCTTTATCTGAAC 60.484 54.545 0.00 0.00 0.00 3.18
671 672 1.762957 CCCTCCGCCTCTTTATCTGAA 59.237 52.381 0.00 0.00 0.00 3.02
672 673 1.414158 CCCTCCGCCTCTTTATCTGA 58.586 55.000 0.00 0.00 0.00 3.27
673 674 0.394565 CCCCTCCGCCTCTTTATCTG 59.605 60.000 0.00 0.00 0.00 2.90
674 675 1.411651 GCCCCTCCGCCTCTTTATCT 61.412 60.000 0.00 0.00 0.00 1.98
675 676 1.071642 GCCCCTCCGCCTCTTTATC 59.928 63.158 0.00 0.00 0.00 1.75
676 677 2.808206 CGCCCCTCCGCCTCTTTAT 61.808 63.158 0.00 0.00 0.00 1.40
677 678 3.467226 CGCCCCTCCGCCTCTTTA 61.467 66.667 0.00 0.00 0.00 1.85
721 722 4.778415 CAGCGTGGACCGAGACCG 62.778 72.222 0.00 0.00 39.56 4.79
722 723 4.436998 CCAGCGTGGACCGAGACC 62.437 72.222 0.00 0.00 40.96 3.85
723 724 3.343788 CTCCAGCGTGGACCGAGAC 62.344 68.421 3.02 0.00 42.67 3.36
750 751 1.111116 TGGAACCTCACCGACGACTT 61.111 55.000 0.00 0.00 0.00 3.01
779 780 2.683465 AAGGGCGCACATGGGAGAT 61.683 57.895 14.57 0.00 0.00 2.75
780 781 3.329889 AAGGGCGCACATGGGAGA 61.330 61.111 14.57 0.00 0.00 3.71
814 843 2.242043 AGCAAGGATGAAACCACAAGG 58.758 47.619 0.00 0.00 42.21 3.61
831 860 9.045223 CAGTGCATCTGTTTAATACTATAAGCA 57.955 33.333 7.80 0.00 39.17 3.91
832 861 9.261180 TCAGTGCATCTGTTTAATACTATAAGC 57.739 33.333 13.59 0.00 43.97 3.09
872 901 2.029918 GTCAACTGGCCATCTTTTCCAC 60.030 50.000 5.51 0.00 0.00 4.02
873 902 2.238521 GTCAACTGGCCATCTTTTCCA 58.761 47.619 5.51 0.00 0.00 3.53
943 980 4.464597 GTGTCTTGGTAGTTCTCTCCATCT 59.535 45.833 0.00 0.00 0.00 2.90
963 1007 0.748005 GGTGCACAGTGTCAAGGTGT 60.748 55.000 20.43 0.00 35.05 4.16
966 1010 2.324215 CTGGTGCACAGTGTCAAGG 58.676 57.895 20.43 0.00 42.42 3.61
1024 1068 2.899505 GAGGAGGAGAGCACAGGC 59.100 66.667 0.00 0.00 41.61 4.85
1369 1419 1.001597 GTAGGAATCGTACGGCAGGAG 60.002 57.143 16.52 0.00 0.00 3.69
1482 1535 1.816863 CGGGATCGGATACCTGGGTG 61.817 65.000 17.08 0.00 0.00 4.61
1749 1817 0.454600 GATGTAGCTCCACGGACGAA 59.545 55.000 0.00 0.00 0.00 3.85
1790 1858 1.005394 TTCGGTTCCAAGGACGAGC 60.005 57.895 0.00 0.00 36.65 5.03
1969 2049 1.751162 CCTCCTCGACCTCTCGCTT 60.751 63.158 0.00 0.00 39.96 4.68
1970 2050 1.990160 ATCCTCCTCGACCTCTCGCT 61.990 60.000 0.00 0.00 39.96 4.93
1971 2051 1.527380 ATCCTCCTCGACCTCTCGC 60.527 63.158 0.00 0.00 39.96 5.03
1980 2060 1.070445 GCCCATGTCATCCTCCTCG 59.930 63.158 0.00 0.00 0.00 4.63
2109 2189 2.665000 CCTTGCCCGAGCTTCTCA 59.335 61.111 0.00 0.00 40.80 3.27
2157 2237 3.130160 GCGAGGCCAGGCTCTTTG 61.130 66.667 12.43 2.79 0.00 2.77
2202 2285 1.218047 CTTCCCCTGCATCGACGAA 59.782 57.895 0.00 0.00 0.00 3.85
2205 2288 1.144936 CCTCTTCCCCTGCATCGAC 59.855 63.158 0.00 0.00 0.00 4.20
2349 2435 0.977627 TGCCGTGGAGATGGATGTCT 60.978 55.000 0.00 0.00 0.00 3.41
2403 2492 3.998913 TGAGTGGGCAATCATCAGTTA 57.001 42.857 0.00 0.00 29.72 2.24
2454 2564 9.862371 AGGAATCATCAACATATATAGTTCGAC 57.138 33.333 0.00 0.00 0.00 4.20
2496 2606 4.831155 CCCGGTTACTATCTTCATCCTGTA 59.169 45.833 0.00 0.00 0.00 2.74
2717 2827 0.393402 TGCCAGTGATCATGGACTGC 60.393 55.000 21.40 10.51 40.51 4.40
2747 2857 0.243095 AGCTGTAAACGTCGGACTCC 59.757 55.000 6.57 0.00 0.00 3.85
2789 2899 4.802051 GGCCTCCTTCCGCATGCA 62.802 66.667 19.57 0.00 0.00 3.96
2828 2938 4.083862 AGCCCGTTCTTCTCGGCC 62.084 66.667 0.00 0.00 45.71 6.13
3043 3165 1.432270 GAGCACCGGCAGCTGATTAC 61.432 60.000 24.84 7.89 43.58 1.89
3131 3253 2.067598 CGACGTCGACTGTGTCACG 61.068 63.158 33.35 0.53 43.02 4.35
3303 3449 4.217550 GGGAAGAAAATTCAACGGACATGA 59.782 41.667 0.00 0.00 0.00 3.07
3477 7055 5.120830 CGTCAGTTCTCATTTCCGAAAAGAT 59.879 40.000 0.00 0.00 0.00 2.40
3605 7183 5.901552 TCCCACAAAAGAAAAATGACAGTC 58.098 37.500 0.00 0.00 0.00 3.51
3644 7222 4.634443 GCAGTTTAGTTGTATCGGGTTGAT 59.366 41.667 0.00 0.00 41.30 2.57
3652 7230 4.491676 TCAGACGGCAGTTTAGTTGTATC 58.508 43.478 0.00 0.00 0.00 2.24
3669 7247 4.032355 TGAAATTTGCGAACGTTTCAGAC 58.968 39.130 0.46 0.00 36.11 3.51
3688 7266 2.809307 TTCGTCAGGCGGGGTTGAA 61.809 57.895 0.00 0.00 41.72 2.69
3700 7278 6.138088 CGTAATATCCTATGAACGTTCGTCA 58.862 40.000 25.56 8.69 0.00 4.35
3714 7292 5.906772 AAGGGAAATGACCGTAATATCCT 57.093 39.130 0.00 0.00 0.00 3.24
3799 7379 1.593196 CGCAACACTCAAGGGAAAGA 58.407 50.000 0.00 0.00 0.00 2.52
4056 7937 1.523758 AATGAACGGGAGACACAAGC 58.476 50.000 0.00 0.00 0.00 4.01
4068 7949 7.219154 TGTTAACTAAGCAACAACAAATGAACG 59.781 33.333 7.22 0.00 31.93 3.95
4115 7996 4.684242 CGCTCCAGCACGAACAAATATATA 59.316 41.667 0.00 0.00 42.21 0.86
4137 8018 0.442310 ACGATCGCAACATCAAACCG 59.558 50.000 16.60 0.00 0.00 4.44
4140 8021 2.096466 GTCACACGATCGCAACATCAAA 60.096 45.455 16.60 0.00 0.00 2.69
4184 8087 7.068839 TCAGCAAGTCAACTTACCCAAATTTAA 59.931 33.333 0.00 0.00 34.28 1.52
4206 8109 2.548057 TGACAAAGAATCAACGGTCAGC 59.452 45.455 0.00 0.00 32.13 4.26
4207 8110 4.511454 TCTTGACAAAGAATCAACGGTCAG 59.489 41.667 0.00 0.00 39.52 3.51
4212 8115 5.915857 TCGAATCTTGACAAAGAATCAACG 58.084 37.500 4.84 0.00 45.44 4.10
4214 8117 7.012327 ACAACTCGAATCTTGACAAAGAATCAA 59.988 33.333 4.84 0.00 45.44 2.57
4215 8118 6.483307 ACAACTCGAATCTTGACAAAGAATCA 59.517 34.615 4.84 0.00 45.44 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.