Multiple sequence alignment - TraesCS4A01G195700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G195700 chr4A 100.000 4440 0 0 1 4440 477889721 477885282 0.000000e+00 8200.0
1 TraesCS4A01G195700 chr4A 92.804 542 28 4 1 542 546378746 546378216 0.000000e+00 774.0
2 TraesCS4A01G195700 chr4A 91.503 153 12 1 4289 4440 712600623 712600775 4.500000e-50 209.0
3 TraesCS4A01G195700 chr4A 87.952 83 5 4 3527 3605 219177168 219177249 4.730000e-15 93.5
4 TraesCS4A01G195700 chr4D 96.712 1612 36 7 1987 3591 98443018 98444619 0.000000e+00 2667.0
5 TraesCS4A01G195700 chr4D 93.845 991 48 8 828 1816 98441692 98442671 0.000000e+00 1480.0
6 TraesCS4A01G195700 chr4D 83.358 679 59 27 3625 4263 98445154 98445818 2.980000e-161 579.0
7 TraesCS4A01G195700 chr4D 93.902 82 5 0 1825 1906 98442939 98443020 1.680000e-24 124.0
8 TraesCS4A01G195700 chr4D 86.747 83 6 4 3527 3605 202347914 202347995 2.200000e-13 87.9
9 TraesCS4A01G195700 chr4B 87.506 2073 164 45 1696 3728 139753951 139755968 0.000000e+00 2305.0
10 TraesCS4A01G195700 chr4B 90.352 881 35 17 833 1696 139753001 139753848 0.000000e+00 1110.0
11 TraesCS4A01G195700 chr1A 93.923 543 20 3 1 542 550334727 550335257 0.000000e+00 808.0
12 TraesCS4A01G195700 chr1A 87.324 71 4 4 3537 3604 292081921 292081989 4.760000e-10 76.8
13 TraesCS4A01G195700 chr2A 93.578 545 22 3 1 544 56419300 56419832 0.000000e+00 800.0
14 TraesCS4A01G195700 chr7B 91.954 522 22 6 24 544 630175054 630175556 0.000000e+00 713.0
15 TraesCS4A01G195700 chr7B 93.151 146 10 0 4295 4440 371224069 371224214 9.670000e-52 215.0
16 TraesCS4A01G195700 chr1D 93.377 151 8 2 4292 4440 399189154 399189304 5.780000e-54 222.0
17 TraesCS4A01G195700 chr1D 94.444 144 7 1 4298 4440 34006558 34006701 2.080000e-53 220.0
18 TraesCS4A01G195700 chr1D 92.105 152 11 1 4290 4440 178466478 178466327 3.480000e-51 213.0
19 TraesCS4A01G195700 chr1D 86.538 104 12 2 3871 3973 59430407 59430509 3.630000e-21 113.0
20 TraesCS4A01G195700 chr6A 92.715 151 9 2 4292 4440 222571415 222571265 2.690000e-52 217.0
21 TraesCS4A01G195700 chr2D 91.558 154 11 2 4289 4440 194458607 194458760 1.250000e-50 211.0
22 TraesCS4A01G195700 chr2D 91.667 60 3 2 3548 3605 50404548 50404607 1.020000e-11 82.4
23 TraesCS4A01G195700 chr2D 88.000 50 3 3 508 556 534579049 534579096 6.200000e-04 56.5
24 TraesCS4A01G195700 chr5B 91.447 152 11 2 4291 4440 479312957 479312806 1.620000e-49 207.0
25 TraesCS4A01G195700 chr5B 89.109 101 11 0 3871 3971 581132960 581132860 4.660000e-25 126.0
26 TraesCS4A01G195700 chr6D 92.414 145 10 1 4297 4440 361051309 361051165 5.820000e-49 206.0
27 TraesCS4A01G195700 chr6D 85.185 108 14 1 437 542 47377775 47377882 4.700000e-20 110.0
28 TraesCS4A01G195700 chr6D 84.545 110 15 1 437 544 47609720 47609611 1.690000e-19 108.0
29 TraesCS4A01G195700 chr3A 92.000 100 8 0 70 169 77404930 77405029 1.670000e-29 141.0
30 TraesCS4A01G195700 chr3D 91.919 99 8 0 70 168 25349340 25349438 5.990000e-29 139.0
31 TraesCS4A01G195700 chr3D 84.337 83 8 5 3527 3605 201318714 201318633 4.760000e-10 76.8
32 TraesCS4A01G195700 chr5A 88.119 101 12 0 3876 3976 479460038 479459938 2.170000e-23 121.0
33 TraesCS4A01G195700 chr3B 91.358 81 7 0 3876 3956 640709987 640709907 1.310000e-20 111.0
34 TraesCS4A01G195700 chr3B 84.545 110 15 1 437 544 813892873 813892982 1.690000e-19 108.0
35 TraesCS4A01G195700 chr3B 100.000 30 0 0 4219 4248 492200977 492201006 6.200000e-04 56.5
36 TraesCS4A01G195700 chr7A 85.321 109 12 2 437 542 83012586 83012693 4.700000e-20 110.0
37 TraesCS4A01G195700 chrUn 84.545 110 15 1 437 544 33304567 33304458 1.690000e-19 108.0
38 TraesCS4A01G195700 chr5D 84.536 97 15 0 3876 3972 370939031 370938935 3.660000e-16 97.1
39 TraesCS4A01G195700 chr5D 95.000 40 2 0 4219 4258 560508566 560508527 3.710000e-06 63.9
40 TraesCS4A01G195700 chr1B 89.855 69 3 3 3538 3604 325813941 325813875 7.910000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G195700 chr4A 477885282 477889721 4439 True 8200.0 8200 100.00000 1 4440 1 chr4A.!!$R1 4439
1 TraesCS4A01G195700 chr4A 546378216 546378746 530 True 774.0 774 92.80400 1 542 1 chr4A.!!$R2 541
2 TraesCS4A01G195700 chr4D 98441692 98445818 4126 False 1212.5 2667 91.95425 828 4263 4 chr4D.!!$F2 3435
3 TraesCS4A01G195700 chr4B 139753001 139755968 2967 False 1707.5 2305 88.92900 833 3728 2 chr4B.!!$F1 2895
4 TraesCS4A01G195700 chr1A 550334727 550335257 530 False 808.0 808 93.92300 1 542 1 chr1A.!!$F2 541
5 TraesCS4A01G195700 chr2A 56419300 56419832 532 False 800.0 800 93.57800 1 544 1 chr2A.!!$F1 543
6 TraesCS4A01G195700 chr7B 630175054 630175556 502 False 713.0 713 91.95400 24 544 1 chr7B.!!$F2 520

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
761 764 0.036388 TTCCTCCTGTGAATGGTCGC 60.036 55.0 0.00 0.0 34.66 5.19 F
1339 1359 0.109132 GTTTCATGGCTCCTTTGCGG 60.109 55.0 0.00 0.0 0.00 5.69 F
1416 1436 1.085091 CAGCTGCTGTTCATGAGACC 58.915 55.0 21.21 0.0 0.00 3.85 F
1700 1825 1.191489 TCGACATCAGTGGCTTGGGA 61.191 55.0 0.00 0.0 0.00 4.37 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2067 2451 0.537143 ACTGGCCAGAACAATTGCGA 60.537 50.000 39.19 0.0 0.00 5.10 R
2644 3044 1.358759 GAGGTGGTGGCAAAACACG 59.641 57.895 10.74 0.0 42.23 4.49 R
2992 3392 1.492176 AGGGATGTATTGCAGGACCAG 59.508 52.381 0.00 0.0 0.00 4.00 R
3521 3923 1.005450 TCTTTGGTAGGGGCAATCCAC 59.995 52.381 0.00 0.0 37.22 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
86 88 0.115745 ACTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
156 158 7.581213 AACTTGAGTCACATATTTTTGGACA 57.419 32.000 0.00 0.00 0.00 4.02
183 185 9.482627 GATGGAGTATTATTTTAGTGGACTCAG 57.517 37.037 0.00 0.00 34.79 3.35
248 250 3.466836 GCGAAAATTACACAGACGTCAC 58.533 45.455 19.50 0.00 0.00 3.67
254 256 3.358707 TTACACAGACGTCACGATTGT 57.641 42.857 19.50 10.01 0.00 2.71
328 330 5.419542 TCTAAAGTTTAGCTCATCACGCAT 58.580 37.500 16.46 0.00 0.00 4.73
433 435 2.232941 TGTCCCTTTACTGGAGTAAGCG 59.767 50.000 0.00 0.00 41.03 4.68
465 468 7.833285 TTAAATGGCTTGGTAAAAAGACTCT 57.167 32.000 0.00 0.00 36.06 3.24
544 547 3.507786 CACGTGCATGCTTACTAGTGTA 58.492 45.455 20.33 0.00 0.00 2.90
545 548 4.112634 CACGTGCATGCTTACTAGTGTAT 58.887 43.478 20.33 0.00 0.00 2.29
546 549 5.278604 CACGTGCATGCTTACTAGTGTATA 58.721 41.667 20.33 0.00 0.00 1.47
547 550 5.920840 CACGTGCATGCTTACTAGTGTATAT 59.079 40.000 20.33 0.00 0.00 0.86
548 551 7.081976 CACGTGCATGCTTACTAGTGTATATA 58.918 38.462 20.33 0.00 0.00 0.86
549 552 7.271438 CACGTGCATGCTTACTAGTGTATATAG 59.729 40.741 20.33 0.00 0.00 1.31
550 553 6.747739 CGTGCATGCTTACTAGTGTATATAGG 59.252 42.308 20.33 0.00 0.00 2.57
551 554 7.361799 CGTGCATGCTTACTAGTGTATATAGGA 60.362 40.741 20.33 0.00 0.00 2.94
552 555 8.470805 GTGCATGCTTACTAGTGTATATAGGAT 58.529 37.037 20.33 0.00 0.00 3.24
553 556 9.035890 TGCATGCTTACTAGTGTATATAGGATT 57.964 33.333 20.33 0.00 0.00 3.01
554 557 9.307121 GCATGCTTACTAGTGTATATAGGATTG 57.693 37.037 11.37 0.00 0.00 2.67
555 558 9.307121 CATGCTTACTAGTGTATATAGGATTGC 57.693 37.037 5.39 0.00 0.00 3.56
556 559 8.417273 TGCTTACTAGTGTATATAGGATTGCA 57.583 34.615 5.39 0.00 0.00 4.08
557 560 8.866093 TGCTTACTAGTGTATATAGGATTGCAA 58.134 33.333 5.39 0.00 0.00 4.08
558 561 9.877178 GCTTACTAGTGTATATAGGATTGCAAT 57.123 33.333 12.83 12.83 0.00 3.56
565 568 8.037758 AGTGTATATAGGATTGCAATAGACAGC 58.962 37.037 12.97 5.43 30.39 4.40
566 569 7.009631 GTGTATATAGGATTGCAATAGACAGCG 59.990 40.741 12.97 0.00 30.39 5.18
567 570 2.988010 AGGATTGCAATAGACAGCGA 57.012 45.000 12.97 0.00 0.00 4.93
568 571 2.555199 AGGATTGCAATAGACAGCGAC 58.445 47.619 12.97 0.00 0.00 5.19
569 572 1.258982 GGATTGCAATAGACAGCGACG 59.741 52.381 12.97 0.00 0.00 5.12
570 573 1.258982 GATTGCAATAGACAGCGACGG 59.741 52.381 12.97 0.00 0.00 4.79
571 574 0.037697 TTGCAATAGACAGCGACGGT 60.038 50.000 0.00 0.00 0.00 4.83
572 575 0.037697 TGCAATAGACAGCGACGGTT 60.038 50.000 0.00 0.00 0.00 4.44
573 576 0.645868 GCAATAGACAGCGACGGTTC 59.354 55.000 0.00 0.00 0.00 3.62
574 577 1.990799 CAATAGACAGCGACGGTTCA 58.009 50.000 0.00 0.00 0.00 3.18
575 578 1.654105 CAATAGACAGCGACGGTTCAC 59.346 52.381 0.00 0.00 0.00 3.18
576 579 1.174783 ATAGACAGCGACGGTTCACT 58.825 50.000 0.00 0.00 0.00 3.41
577 580 0.240145 TAGACAGCGACGGTTCACTG 59.760 55.000 0.00 0.00 37.83 3.66
578 581 2.022129 GACAGCGACGGTTCACTGG 61.022 63.158 0.00 0.00 36.39 4.00
579 582 3.414700 CAGCGACGGTTCACTGGC 61.415 66.667 0.00 0.00 29.51 4.85
580 583 4.681978 AGCGACGGTTCACTGGCC 62.682 66.667 0.00 0.00 0.00 5.36
581 584 4.980805 GCGACGGTTCACTGGCCA 62.981 66.667 4.71 4.71 0.00 5.36
582 585 2.047274 CGACGGTTCACTGGCCAT 60.047 61.111 5.51 0.00 0.00 4.40
583 586 2.390599 CGACGGTTCACTGGCCATG 61.391 63.158 5.51 7.41 0.00 3.66
584 587 1.003839 GACGGTTCACTGGCCATGA 60.004 57.895 5.51 9.96 0.00 3.07
585 588 0.392998 GACGGTTCACTGGCCATGAT 60.393 55.000 5.51 0.00 0.00 2.45
586 589 0.677731 ACGGTTCACTGGCCATGATG 60.678 55.000 5.51 5.57 0.00 3.07
587 590 1.378882 CGGTTCACTGGCCATGATGG 61.379 60.000 5.51 7.21 41.55 3.51
599 602 1.661617 CCATGATGGCATTTGCAAACG 59.338 47.619 15.41 7.61 44.36 3.60
600 603 1.061421 CATGATGGCATTTGCAAACGC 59.939 47.619 21.33 21.33 44.36 4.84
601 604 0.669932 TGATGGCATTTGCAAACGCC 60.670 50.000 35.80 35.80 43.27 5.68
602 605 1.685640 GATGGCATTTGCAAACGCCG 61.686 55.000 35.72 17.29 45.33 6.46
603 606 2.355718 GGCATTTGCAAACGCCGT 60.356 55.556 30.93 4.87 44.36 5.68
604 607 2.656807 GGCATTTGCAAACGCCGTG 61.657 57.895 30.93 17.91 44.36 4.94
605 608 1.948635 GCATTTGCAAACGCCGTGT 60.949 52.632 19.03 0.00 41.59 4.49
606 609 1.875419 GCATTTGCAAACGCCGTGTC 61.875 55.000 19.03 4.13 41.59 3.67
607 610 1.007849 ATTTGCAAACGCCGTGTCC 60.008 52.632 15.41 0.00 0.00 4.02
608 611 2.725275 ATTTGCAAACGCCGTGTCCG 62.725 55.000 15.41 0.00 0.00 4.79
621 624 3.017265 CGTGTCCGGTAGTTTTAGTGT 57.983 47.619 0.00 0.00 0.00 3.55
622 625 3.383761 CGTGTCCGGTAGTTTTAGTGTT 58.616 45.455 0.00 0.00 0.00 3.32
623 626 3.803778 CGTGTCCGGTAGTTTTAGTGTTT 59.196 43.478 0.00 0.00 0.00 2.83
624 627 4.318263 CGTGTCCGGTAGTTTTAGTGTTTG 60.318 45.833 0.00 0.00 0.00 2.93
625 628 4.024641 GTGTCCGGTAGTTTTAGTGTTTGG 60.025 45.833 0.00 0.00 0.00 3.28
626 629 3.499537 GTCCGGTAGTTTTAGTGTTTGGG 59.500 47.826 0.00 0.00 0.00 4.12
627 630 3.390639 TCCGGTAGTTTTAGTGTTTGGGA 59.609 43.478 0.00 0.00 0.00 4.37
628 631 4.041938 TCCGGTAGTTTTAGTGTTTGGGAT 59.958 41.667 0.00 0.00 0.00 3.85
629 632 4.155280 CCGGTAGTTTTAGTGTTTGGGATG 59.845 45.833 0.00 0.00 0.00 3.51
630 633 4.379082 CGGTAGTTTTAGTGTTTGGGATGC 60.379 45.833 0.00 0.00 0.00 3.91
631 634 4.082408 GGTAGTTTTAGTGTTTGGGATGCC 60.082 45.833 0.00 0.00 0.00 4.40
632 635 3.571590 AGTTTTAGTGTTTGGGATGCCA 58.428 40.909 0.00 0.00 0.00 4.92
633 636 4.159557 AGTTTTAGTGTTTGGGATGCCAT 58.840 39.130 6.84 0.00 0.00 4.40
634 637 4.592778 AGTTTTAGTGTTTGGGATGCCATT 59.407 37.500 6.84 0.00 0.00 3.16
635 638 5.071653 AGTTTTAGTGTTTGGGATGCCATTT 59.928 36.000 6.84 0.00 0.00 2.32
636 639 5.559148 TTTAGTGTTTGGGATGCCATTTT 57.441 34.783 6.84 0.00 0.00 1.82
637 640 5.559148 TTAGTGTTTGGGATGCCATTTTT 57.441 34.783 6.84 0.00 0.00 1.94
670 673 8.956533 AAACATGGCATTTTGTTTAGTTTAGT 57.043 26.923 14.26 0.00 42.57 2.24
671 674 7.945033 ACATGGCATTTTGTTTAGTTTAGTG 57.055 32.000 0.00 0.00 0.00 2.74
672 675 6.423604 ACATGGCATTTTGTTTAGTTTAGTGC 59.576 34.615 0.00 0.00 0.00 4.40
673 676 5.907207 TGGCATTTTGTTTAGTTTAGTGCA 58.093 33.333 0.00 0.00 0.00 4.57
674 677 6.520272 TGGCATTTTGTTTAGTTTAGTGCAT 58.480 32.000 0.00 0.00 0.00 3.96
675 678 6.989169 TGGCATTTTGTTTAGTTTAGTGCATT 59.011 30.769 0.00 0.00 0.00 3.56
676 679 7.497249 TGGCATTTTGTTTAGTTTAGTGCATTT 59.503 29.630 0.00 0.00 0.00 2.32
677 680 8.341903 GGCATTTTGTTTAGTTTAGTGCATTTT 58.658 29.630 0.00 0.00 0.00 1.82
678 681 9.715123 GCATTTTGTTTAGTTTAGTGCATTTTT 57.285 25.926 0.00 0.00 0.00 1.94
695 698 0.753867 TTTTCCCCCGAAAAACTGCC 59.246 50.000 0.00 0.00 43.38 4.85
696 699 0.397254 TTTCCCCCGAAAAACTGCCA 60.397 50.000 0.00 0.00 35.02 4.92
697 700 1.110518 TTCCCCCGAAAAACTGCCAC 61.111 55.000 0.00 0.00 0.00 5.01
698 701 2.570284 CCCCCGAAAAACTGCCACC 61.570 63.158 0.00 0.00 0.00 4.61
699 702 2.642700 CCCGAAAAACTGCCACCG 59.357 61.111 0.00 0.00 0.00 4.94
700 703 2.190841 CCCGAAAAACTGCCACCGT 61.191 57.895 0.00 0.00 0.00 4.83
701 704 1.281656 CCGAAAAACTGCCACCGTC 59.718 57.895 0.00 0.00 0.00 4.79
702 705 1.440938 CCGAAAAACTGCCACCGTCA 61.441 55.000 0.00 0.00 0.00 4.35
703 706 0.316689 CGAAAAACTGCCACCGTCAC 60.317 55.000 0.00 0.00 0.00 3.67
704 707 0.736053 GAAAAACTGCCACCGTCACA 59.264 50.000 0.00 0.00 0.00 3.58
705 708 0.738389 AAAAACTGCCACCGTCACAG 59.262 50.000 0.00 0.00 37.45 3.66
706 709 1.724582 AAAACTGCCACCGTCACAGC 61.725 55.000 0.00 0.00 34.72 4.40
707 710 2.608970 AAACTGCCACCGTCACAGCT 62.609 55.000 0.00 0.00 34.72 4.24
708 711 2.281070 CTGCCACCGTCACAGCTT 60.281 61.111 0.00 0.00 0.00 3.74
709 712 2.591429 TGCCACCGTCACAGCTTG 60.591 61.111 0.00 0.00 0.00 4.01
710 713 2.280797 GCCACCGTCACAGCTTGA 60.281 61.111 0.00 0.00 0.00 3.02
711 714 1.672356 GCCACCGTCACAGCTTGAT 60.672 57.895 2.61 0.00 36.32 2.57
712 715 1.237285 GCCACCGTCACAGCTTGATT 61.237 55.000 2.61 0.00 36.32 2.57
713 716 0.798776 CCACCGTCACAGCTTGATTC 59.201 55.000 2.61 0.00 36.32 2.52
714 717 1.609061 CCACCGTCACAGCTTGATTCT 60.609 52.381 2.61 0.00 36.32 2.40
715 718 1.462283 CACCGTCACAGCTTGATTCTG 59.538 52.381 2.61 0.00 36.32 3.02
716 719 1.070758 ACCGTCACAGCTTGATTCTGT 59.929 47.619 2.61 0.00 44.87 3.41
722 725 2.704572 ACAGCTTGATTCTGTGGCTAC 58.295 47.619 0.00 0.00 42.63 3.58
723 726 1.662629 CAGCTTGATTCTGTGGCTACG 59.337 52.381 0.00 0.00 0.00 3.51
724 727 1.550524 AGCTTGATTCTGTGGCTACGA 59.449 47.619 0.00 0.00 0.00 3.43
725 728 1.929836 GCTTGATTCTGTGGCTACGAG 59.070 52.381 0.00 0.00 0.00 4.18
726 729 2.544685 CTTGATTCTGTGGCTACGAGG 58.455 52.381 0.00 0.00 0.00 4.63
727 730 0.824109 TGATTCTGTGGCTACGAGGG 59.176 55.000 0.00 0.00 0.00 4.30
728 731 0.105039 GATTCTGTGGCTACGAGGGG 59.895 60.000 0.00 0.00 0.00 4.79
729 732 1.338136 ATTCTGTGGCTACGAGGGGG 61.338 60.000 0.00 0.00 0.00 5.40
730 733 2.683933 CTGTGGCTACGAGGGGGT 60.684 66.667 0.00 0.00 0.00 4.95
731 734 2.203877 TGTGGCTACGAGGGGGTT 60.204 61.111 0.00 0.00 0.00 4.11
732 735 2.240162 CTGTGGCTACGAGGGGGTTC 62.240 65.000 0.00 0.00 0.00 3.62
733 736 3.072468 TGGCTACGAGGGGGTTCG 61.072 66.667 0.00 0.00 45.70 3.95
734 737 4.525949 GGCTACGAGGGGGTTCGC 62.526 72.222 0.00 0.00 44.15 4.70
735 738 3.459063 GCTACGAGGGGGTTCGCT 61.459 66.667 0.00 0.00 44.15 4.93
736 739 3.015312 GCTACGAGGGGGTTCGCTT 62.015 63.158 0.00 0.00 44.15 4.68
737 740 1.595357 CTACGAGGGGGTTCGCTTT 59.405 57.895 0.00 0.00 44.15 3.51
738 741 0.739813 CTACGAGGGGGTTCGCTTTG 60.740 60.000 0.00 0.00 44.15 2.77
739 742 2.175035 TACGAGGGGGTTCGCTTTGG 62.175 60.000 0.00 0.00 44.15 3.28
740 743 2.754375 GAGGGGGTTCGCTTTGGA 59.246 61.111 0.00 0.00 36.23 3.53
741 744 1.303282 GAGGGGGTTCGCTTTGGAT 59.697 57.895 0.00 0.00 36.23 3.41
742 745 0.323451 GAGGGGGTTCGCTTTGGATT 60.323 55.000 0.00 0.00 36.23 3.01
743 746 0.114364 AGGGGGTTCGCTTTGGATTT 59.886 50.000 0.00 0.00 31.69 2.17
744 747 0.530744 GGGGGTTCGCTTTGGATTTC 59.469 55.000 0.00 0.00 0.00 2.17
745 748 0.530744 GGGGTTCGCTTTGGATTTCC 59.469 55.000 0.00 0.00 0.00 3.13
746 749 1.545841 GGGTTCGCTTTGGATTTCCT 58.454 50.000 0.00 0.00 36.82 3.36
747 750 1.472878 GGGTTCGCTTTGGATTTCCTC 59.527 52.381 0.00 0.00 36.82 3.71
748 751 1.472878 GGTTCGCTTTGGATTTCCTCC 59.527 52.381 0.00 0.00 45.19 4.30
749 752 2.437413 GTTCGCTTTGGATTTCCTCCT 58.563 47.619 0.00 0.00 45.21 3.69
750 753 2.113860 TCGCTTTGGATTTCCTCCTG 57.886 50.000 0.00 0.00 45.21 3.86
751 754 1.351017 TCGCTTTGGATTTCCTCCTGT 59.649 47.619 0.00 0.00 45.21 4.00
752 755 1.470098 CGCTTTGGATTTCCTCCTGTG 59.530 52.381 0.00 0.00 45.21 3.66
753 756 2.795329 GCTTTGGATTTCCTCCTGTGA 58.205 47.619 0.00 0.00 45.21 3.58
754 757 3.157087 GCTTTGGATTTCCTCCTGTGAA 58.843 45.455 0.00 0.00 45.21 3.18
755 758 3.766051 GCTTTGGATTTCCTCCTGTGAAT 59.234 43.478 0.00 0.00 45.21 2.57
756 759 4.381292 GCTTTGGATTTCCTCCTGTGAATG 60.381 45.833 0.00 0.00 45.21 2.67
757 760 3.370840 TGGATTTCCTCCTGTGAATGG 57.629 47.619 0.00 0.00 45.21 3.16
758 761 2.649312 TGGATTTCCTCCTGTGAATGGT 59.351 45.455 0.00 0.00 45.21 3.55
759 762 3.282885 GGATTTCCTCCTGTGAATGGTC 58.717 50.000 0.00 0.00 41.29 4.02
760 763 2.472695 TTTCCTCCTGTGAATGGTCG 57.527 50.000 0.00 0.00 0.00 4.79
761 764 0.036388 TTCCTCCTGTGAATGGTCGC 60.036 55.000 0.00 0.00 34.66 5.19
762 765 1.450312 CCTCCTGTGAATGGTCGCC 60.450 63.158 0.00 0.00 32.98 5.54
763 766 1.296392 CTCCTGTGAATGGTCGCCA 59.704 57.895 1.01 1.01 38.19 5.69
764 767 0.321564 CTCCTGTGAATGGTCGCCAA 60.322 55.000 2.68 0.00 36.95 4.52
765 768 0.109532 TCCTGTGAATGGTCGCCAAA 59.890 50.000 2.68 0.00 36.95 3.28
766 769 1.176527 CCTGTGAATGGTCGCCAAAT 58.823 50.000 2.68 0.00 36.95 2.32
767 770 2.026729 TCCTGTGAATGGTCGCCAAATA 60.027 45.455 2.68 0.00 36.95 1.40
768 771 2.355756 CCTGTGAATGGTCGCCAAATAG 59.644 50.000 2.68 1.17 36.95 1.73
769 772 1.742831 TGTGAATGGTCGCCAAATAGC 59.257 47.619 2.68 0.00 36.95 2.97
770 773 1.742831 GTGAATGGTCGCCAAATAGCA 59.257 47.619 2.68 0.00 36.95 3.49
771 774 2.358898 GTGAATGGTCGCCAAATAGCAT 59.641 45.455 2.68 0.00 36.95 3.79
772 775 3.023119 TGAATGGTCGCCAAATAGCATT 58.977 40.909 2.68 0.00 44.19 3.56
773 776 4.036262 GTGAATGGTCGCCAAATAGCATTA 59.964 41.667 2.68 0.00 42.23 1.90
774 777 4.275689 TGAATGGTCGCCAAATAGCATTAG 59.724 41.667 2.68 0.00 42.23 1.73
775 778 2.571212 TGGTCGCCAAATAGCATTAGG 58.429 47.619 0.00 0.00 0.00 2.69
776 779 1.880027 GGTCGCCAAATAGCATTAGGG 59.120 52.381 0.00 0.00 0.00 3.53
777 780 2.486548 GGTCGCCAAATAGCATTAGGGA 60.487 50.000 0.00 0.00 0.00 4.20
778 781 3.211045 GTCGCCAAATAGCATTAGGGAA 58.789 45.455 0.00 0.00 0.00 3.97
779 782 3.821033 GTCGCCAAATAGCATTAGGGAAT 59.179 43.478 0.00 0.00 0.00 3.01
780 783 5.001232 GTCGCCAAATAGCATTAGGGAATA 58.999 41.667 0.00 0.00 0.00 1.75
781 784 5.648092 GTCGCCAAATAGCATTAGGGAATAT 59.352 40.000 0.00 0.00 0.00 1.28
782 785 5.880332 TCGCCAAATAGCATTAGGGAATATC 59.120 40.000 0.00 0.00 0.00 1.63
783 786 5.066505 CGCCAAATAGCATTAGGGAATATCC 59.933 44.000 0.00 0.00 35.23 2.59
809 812 9.480053 CCTTAAAAACATTAGGGAATATGCATG 57.520 33.333 10.16 0.00 0.00 4.06
810 813 8.885494 TTAAAAACATTAGGGAATATGCATGC 57.115 30.769 11.82 11.82 0.00 4.06
811 814 6.482898 AAAACATTAGGGAATATGCATGCA 57.517 33.333 25.04 25.04 0.00 3.96
812 815 6.675413 AAACATTAGGGAATATGCATGCAT 57.325 33.333 33.92 33.92 40.19 3.96
813 816 7.779754 AAACATTAGGGAATATGCATGCATA 57.220 32.000 35.71 35.71 42.28 3.14
814 817 7.400599 AACATTAGGGAATATGCATGCATAG 57.599 36.000 36.05 24.31 41.51 2.23
815 818 6.487828 ACATTAGGGAATATGCATGCATAGT 58.512 36.000 36.05 34.99 41.51 2.12
816 819 7.632861 ACATTAGGGAATATGCATGCATAGTA 58.367 34.615 36.05 23.12 41.51 1.82
817 820 7.554118 ACATTAGGGAATATGCATGCATAGTAC 59.446 37.037 36.05 34.38 41.51 2.73
818 821 5.768980 AGGGAATATGCATGCATAGTACT 57.231 39.130 36.22 30.98 41.51 2.73
819 822 5.738909 AGGGAATATGCATGCATAGTACTC 58.261 41.667 36.22 28.49 41.51 2.59
820 823 4.878397 GGGAATATGCATGCATAGTACTCC 59.122 45.833 36.22 32.93 41.51 3.85
821 824 5.338708 GGGAATATGCATGCATAGTACTCCT 60.339 44.000 36.22 21.34 41.51 3.69
822 825 6.127054 GGGAATATGCATGCATAGTACTCCTA 60.127 42.308 36.22 19.84 41.51 2.94
823 826 6.758886 GGAATATGCATGCATAGTACTCCTAC 59.241 42.308 36.05 22.98 41.51 3.18
824 827 7.364232 GGAATATGCATGCATAGTACTCCTACT 60.364 40.741 36.05 18.65 41.51 2.57
825 828 8.595362 AATATGCATGCATAGTACTCCTACTA 57.405 34.615 36.05 17.62 41.51 1.82
826 829 5.966742 TGCATGCATAGTACTCCTACTAG 57.033 43.478 18.46 0.00 38.59 2.57
829 832 7.175797 TGCATGCATAGTACTCCTACTAGTAT 58.824 38.462 18.46 0.00 38.59 2.12
978 985 1.597027 CACGCCCTATTTAGCCCCG 60.597 63.158 0.00 0.00 0.00 5.73
998 1005 5.478679 CCCCGTCATCAGACTTCTATAATCT 59.521 44.000 0.00 0.00 42.73 2.40
999 1006 6.015010 CCCCGTCATCAGACTTCTATAATCTT 60.015 42.308 0.00 0.00 42.73 2.40
1014 1021 8.056407 TCTATAATCTTGAGCACGCTATACAT 57.944 34.615 0.00 0.00 0.00 2.29
1015 1022 9.174166 TCTATAATCTTGAGCACGCTATACATA 57.826 33.333 0.00 0.00 0.00 2.29
1016 1023 9.227490 CTATAATCTTGAGCACGCTATACATAC 57.773 37.037 0.00 0.00 0.00 2.39
1017 1024 4.911514 TCTTGAGCACGCTATACATACA 57.088 40.909 0.00 0.00 0.00 2.29
1018 1025 4.607955 TCTTGAGCACGCTATACATACAC 58.392 43.478 0.00 0.00 0.00 2.90
1019 1026 2.994849 TGAGCACGCTATACATACACG 58.005 47.619 0.00 0.00 0.00 4.49
1111 1118 1.518572 CGACTCGATTCCCCAACCG 60.519 63.158 0.00 0.00 0.00 4.44
1112 1119 1.814169 GACTCGATTCCCCAACCGC 60.814 63.158 0.00 0.00 0.00 5.68
1113 1120 2.267642 CTCGATTCCCCAACCGCA 59.732 61.111 0.00 0.00 0.00 5.69
1146 1164 1.134877 TGATTCTCAGCTCGCTTCCAG 60.135 52.381 0.00 0.00 0.00 3.86
1182 1200 0.319986 GAGCCTCGGATTTCGGATCC 60.320 60.000 0.00 0.00 39.77 3.36
1196 1214 3.735037 GATCCCGGCGTTCCCTCAC 62.735 68.421 6.01 0.00 0.00 3.51
1263 1283 1.654774 CGATCGATCCGCTTCCTCA 59.345 57.895 19.51 0.00 0.00 3.86
1265 1285 1.468914 CGATCGATCCGCTTCCTCATA 59.531 52.381 19.51 0.00 0.00 2.15
1339 1359 0.109132 GTTTCATGGCTCCTTTGCGG 60.109 55.000 0.00 0.00 0.00 5.69
1387 1407 5.627499 TTTCTGAAATTGGAACGGAGATG 57.373 39.130 0.00 0.00 0.00 2.90
1416 1436 1.085091 CAGCTGCTGTTCATGAGACC 58.915 55.000 21.21 0.00 0.00 3.85
1429 1449 2.879103 TGAGACCAATTCACCCCTTC 57.121 50.000 0.00 0.00 0.00 3.46
1700 1825 1.191489 TCGACATCAGTGGCTTGGGA 61.191 55.000 0.00 0.00 0.00 4.37
1755 1880 7.552687 ACCTGTTATGAAATCTTCTTATGCGAA 59.447 33.333 0.00 0.00 0.00 4.70
1860 2244 7.224297 TGGCTGTATAAGGATAGAATTTGGAC 58.776 38.462 0.00 0.00 0.00 4.02
1916 2300 9.109393 TCTAGTATATGTTGATGCTTGGTTTTC 57.891 33.333 0.00 0.00 0.00 2.29
1923 2307 6.454795 TGTTGATGCTTGGTTTTCTAATTCC 58.545 36.000 0.00 0.00 0.00 3.01
1926 2310 8.303876 GTTGATGCTTGGTTTTCTAATTCCTTA 58.696 33.333 0.00 0.00 0.00 2.69
1927 2311 8.593945 TGATGCTTGGTTTTCTAATTCCTTAT 57.406 30.769 0.00 0.00 0.00 1.73
1943 2327 6.598753 TTCCTTATTATGCTGTTAGTTCGC 57.401 37.500 0.00 0.00 0.00 4.70
1945 2329 6.346096 TCCTTATTATGCTGTTAGTTCGCTT 58.654 36.000 0.00 0.00 0.00 4.68
1947 2331 7.011109 TCCTTATTATGCTGTTAGTTCGCTTTC 59.989 37.037 0.00 0.00 0.00 2.62
1949 2333 5.530519 TTATGCTGTTAGTTCGCTTTCTG 57.469 39.130 0.00 0.00 0.00 3.02
1950 2334 2.833794 TGCTGTTAGTTCGCTTTCTGT 58.166 42.857 0.00 0.00 0.00 3.41
1951 2335 3.985008 TGCTGTTAGTTCGCTTTCTGTA 58.015 40.909 0.00 0.00 0.00 2.74
1952 2336 3.987868 TGCTGTTAGTTCGCTTTCTGTAG 59.012 43.478 0.00 0.00 0.00 2.74
1996 2380 4.761227 TGTGCATGAACAAGATACACACAT 59.239 37.500 3.25 0.00 32.06 3.21
2035 2419 6.988580 TGCATATCATCTTCAGTGTTAGAAGG 59.011 38.462 0.00 0.15 42.09 3.46
2047 2431 8.197592 TCAGTGTTAGAAGGTTCAGGTTTATA 57.802 34.615 0.00 0.00 0.00 0.98
2241 2625 4.450419 CCAGCTTGTGAGAAGTTTACAGAG 59.550 45.833 0.00 0.00 0.00 3.35
2370 2754 4.211125 TGAACACTTTGGCCTGTAATTCA 58.789 39.130 3.32 10.64 0.00 2.57
2371 2755 4.832266 TGAACACTTTGGCCTGTAATTCAT 59.168 37.500 3.32 0.00 0.00 2.57
2732 3132 4.832248 TCCTTTATCTCACTTGCATCGTT 58.168 39.130 0.00 0.00 0.00 3.85
2930 3330 6.206634 TCAGCTTCTTCGGTTAATGTTCAATT 59.793 34.615 0.00 0.00 0.00 2.32
2931 3331 6.524586 CAGCTTCTTCGGTTAATGTTCAATTC 59.475 38.462 0.00 0.00 0.00 2.17
2932 3332 6.206634 AGCTTCTTCGGTTAATGTTCAATTCA 59.793 34.615 0.00 0.00 0.00 2.57
2933 3333 6.861055 GCTTCTTCGGTTAATGTTCAATTCAA 59.139 34.615 0.00 0.00 0.00 2.69
2934 3334 7.542130 GCTTCTTCGGTTAATGTTCAATTCAAT 59.458 33.333 0.00 0.00 0.00 2.57
2992 3392 0.648441 TGTTCGACAGTGCAAACGAC 59.352 50.000 0.00 0.00 34.59 4.34
3066 3466 8.107399 TCGAGAAGAACGATATATGTACCATT 57.893 34.615 0.00 0.00 34.85 3.16
3096 3496 0.039256 GCGATGCTGGCAAAAAGACA 60.039 50.000 0.00 0.00 0.00 3.41
3152 3552 4.183865 CGTGATGCATGAAGGTAGAAAGA 58.816 43.478 2.46 0.00 0.00 2.52
3302 3702 0.546122 ATAAAGGGAGCGGCATGACA 59.454 50.000 0.00 0.00 0.00 3.58
3353 3753 6.033196 CCGTGTTGTACTTATTACTTCGTCAG 59.967 42.308 0.00 0.00 0.00 3.51
3419 3820 4.218635 TCGAGTTTCAGTCTGTCTGCTAAT 59.781 41.667 0.00 0.00 43.32 1.73
3420 3821 5.414765 TCGAGTTTCAGTCTGTCTGCTAATA 59.585 40.000 0.00 0.00 43.32 0.98
3452 3853 4.207891 AGTCTCGTCATATGCCTTGTTT 57.792 40.909 0.00 0.00 0.00 2.83
3460 3861 6.037062 TCGTCATATGCCTTGTTTTGACTATG 59.963 38.462 0.00 0.00 33.14 2.23
3481 3882 1.000145 GATTTCGGTCGGTGAAGAGC 59.000 55.000 0.00 0.00 35.48 4.09
3521 3923 2.031245 TGCCGTTGAACATGCTAACAAG 60.031 45.455 8.07 0.00 0.00 3.16
3545 3947 2.286365 TTGCCCCTACCAAAGAGTTG 57.714 50.000 0.00 0.00 34.25 3.16
3618 4024 5.220381 GCTAGAAAAACTTTGGCCAACTAC 58.780 41.667 20.35 5.82 0.00 2.73
3619 4025 4.665833 AGAAAAACTTTGGCCAACTACC 57.334 40.909 20.35 4.02 0.00 3.18
3621 4027 4.653801 AGAAAAACTTTGGCCAACTACCAT 59.346 37.500 20.35 3.41 36.96 3.55
3622 4028 5.836358 AGAAAAACTTTGGCCAACTACCATA 59.164 36.000 20.35 0.00 36.96 2.74
3626 4533 4.993028 ACTTTGGCCAACTACCATAGAAA 58.007 39.130 20.35 0.00 38.19 2.52
3628 4535 6.016555 ACTTTGGCCAACTACCATAGAAAAT 58.983 36.000 20.35 0.00 38.19 1.82
3633 4540 8.423906 TGGCCAACTACCATAGAAAATAAAAA 57.576 30.769 0.61 0.00 30.29 1.94
3661 4568 9.189156 ACACTATTGCAAACATTGGTATTCTAT 57.811 29.630 1.71 0.00 0.00 1.98
3694 4603 3.724508 TGTTAATAAATGCATGCGGGG 57.275 42.857 14.09 0.00 0.00 5.73
3717 4626 7.381323 GGGACATGATTTTCTGAATTGTCTTT 58.619 34.615 0.00 0.00 34.07 2.52
3728 4637 8.939201 TTCTGAATTGTCTTTATGCAACAAAA 57.061 26.923 5.09 0.00 36.57 2.44
3729 4638 8.939201 TCTGAATTGTCTTTATGCAACAAAAA 57.061 26.923 5.09 0.00 36.57 1.94
3767 4676 8.814038 ATACATTCTTTTAGGTCATTGAGCTT 57.186 30.769 22.28 8.09 40.94 3.74
3803 4712 7.548075 TGAAGGACTCCACGAAAAGAATATAAC 59.452 37.037 0.00 0.00 0.00 1.89
3852 4761 8.116026 AGAATAAAATGTTGTACTCCCTCCATT 58.884 33.333 0.00 0.00 0.00 3.16
3856 4765 6.590234 AATGTTGTACTCCCTCCATTTTTC 57.410 37.500 0.00 0.00 0.00 2.29
3857 4766 5.319043 TGTTGTACTCCCTCCATTTTTCT 57.681 39.130 0.00 0.00 0.00 2.52
3869 4778 5.208463 TCCATTTTTCTAAACAAGGCCAC 57.792 39.130 5.01 0.00 0.00 5.01
3874 4817 5.669164 TTTTCTAAACAAGGCCACTTTGT 57.331 34.783 5.01 3.86 33.81 2.83
4055 5012 8.139350 AGTAGGTAAAGTGCAACCAAATAAAAC 58.861 33.333 7.99 0.00 37.80 2.43
4070 5027 9.635404 ACCAAATAAAACCCAATAATATCTCGA 57.365 29.630 0.00 0.00 0.00 4.04
4076 5033 8.664211 AAAACCCAATAATATCTCGAGTTCTC 57.336 34.615 13.13 0.00 0.00 2.87
4133 5092 2.018515 GAGAGGGGTAGAGTGACTTCG 58.981 57.143 0.00 0.00 0.00 3.79
4134 5093 1.104630 GAGGGGTAGAGTGACTTCGG 58.895 60.000 0.00 0.00 0.00 4.30
4154 5113 4.346709 TCGGATCAAATCATGCTTACCCTA 59.653 41.667 0.00 0.00 0.00 3.53
4164 5123 2.121129 TGCTTACCCTATACCACCACC 58.879 52.381 0.00 0.00 0.00 4.61
4170 5129 0.383231 CCTATACCACCACCGACGTC 59.617 60.000 5.18 5.18 0.00 4.34
4175 5134 2.732016 CACCACCGACGTCTTGGA 59.268 61.111 29.85 0.00 34.24 3.53
4182 5141 1.897802 ACCGACGTCTTGGAATAAGGT 59.102 47.619 14.70 7.07 0.00 3.50
4188 5147 3.071892 ACGTCTTGGAATAAGGTTGTCCA 59.928 43.478 0.00 0.00 39.70 4.02
4191 5150 5.523916 CGTCTTGGAATAAGGTTGTCCATAG 59.476 44.000 0.00 0.00 41.05 2.23
4233 5192 3.941483 ACTATTGTGCATGTCAACTAGGC 59.059 43.478 7.41 0.00 0.00 3.93
4240 5199 5.242615 TGTGCATGTCAACTAGGCAATTTTA 59.757 36.000 0.00 0.00 34.09 1.52
4243 5202 6.812656 TGCATGTCAACTAGGCAATTTTAATG 59.187 34.615 0.00 0.00 34.09 1.90
4249 5208 7.489113 GTCAACTAGGCAATTTTAATGATGTGG 59.511 37.037 0.00 0.00 0.00 4.17
4250 5209 5.906073 ACTAGGCAATTTTAATGATGTGGC 58.094 37.500 0.00 0.00 0.00 5.01
4251 5210 4.822685 AGGCAATTTTAATGATGTGGCA 57.177 36.364 0.00 0.00 34.27 4.92
4252 5211 5.362105 AGGCAATTTTAATGATGTGGCAT 57.638 34.783 0.00 0.00 34.27 4.40
4253 5212 6.482898 AGGCAATTTTAATGATGTGGCATA 57.517 33.333 0.00 0.00 34.27 3.14
4256 5215 6.985645 GGCAATTTTAATGATGTGGCATAGAA 59.014 34.615 0.00 0.00 0.00 2.10
4257 5216 7.658575 GGCAATTTTAATGATGTGGCATAGAAT 59.341 33.333 0.00 0.00 0.00 2.40
4265 5224 8.523915 AATGATGTGGCATAGAATACAAAAGA 57.476 30.769 0.00 0.00 0.00 2.52
4266 5225 7.558161 TGATGTGGCATAGAATACAAAAGAG 57.442 36.000 0.00 0.00 0.00 2.85
4267 5226 7.337938 TGATGTGGCATAGAATACAAAAGAGA 58.662 34.615 0.00 0.00 0.00 3.10
4268 5227 7.496920 TGATGTGGCATAGAATACAAAAGAGAG 59.503 37.037 0.00 0.00 0.00 3.20
4269 5228 6.115446 TGTGGCATAGAATACAAAAGAGAGG 58.885 40.000 0.00 0.00 0.00 3.69
4270 5229 5.008118 GTGGCATAGAATACAAAAGAGAGGC 59.992 44.000 0.00 0.00 0.00 4.70
4271 5230 5.126067 GGCATAGAATACAAAAGAGAGGCA 58.874 41.667 0.00 0.00 0.00 4.75
4272 5231 5.767168 GGCATAGAATACAAAAGAGAGGCAT 59.233 40.000 0.00 0.00 0.00 4.40
4273 5232 6.936900 GGCATAGAATACAAAAGAGAGGCATA 59.063 38.462 0.00 0.00 0.00 3.14
4274 5233 7.609532 GGCATAGAATACAAAAGAGAGGCATAT 59.390 37.037 0.00 0.00 0.00 1.78
4275 5234 8.663911 GCATAGAATACAAAAGAGAGGCATATC 58.336 37.037 0.00 0.00 0.00 1.63
4276 5235 9.716531 CATAGAATACAAAAGAGAGGCATATCA 57.283 33.333 0.00 0.00 0.00 2.15
4278 5237 8.618702 AGAATACAAAAGAGAGGCATATCATG 57.381 34.615 0.00 0.00 0.00 3.07
4279 5238 8.435187 AGAATACAAAAGAGAGGCATATCATGA 58.565 33.333 0.00 0.00 0.00 3.07
4280 5239 9.228949 GAATACAAAAGAGAGGCATATCATGAT 57.771 33.333 13.81 13.81 0.00 2.45
4282 5241 7.976135 ACAAAAGAGAGGCATATCATGATAC 57.024 36.000 17.60 6.20 0.00 2.24
4283 5242 6.939163 ACAAAAGAGAGGCATATCATGATACC 59.061 38.462 17.60 14.68 0.00 2.73
4284 5243 4.998671 AGAGAGGCATATCATGATACCG 57.001 45.455 17.60 12.62 0.00 4.02
4285 5244 4.348486 AGAGAGGCATATCATGATACCGT 58.652 43.478 17.60 12.60 0.00 4.83
4286 5245 5.510430 AGAGAGGCATATCATGATACCGTA 58.490 41.667 17.60 0.00 0.00 4.02
4287 5246 5.358442 AGAGAGGCATATCATGATACCGTAC 59.642 44.000 17.60 11.52 0.00 3.67
4288 5247 4.402793 AGAGGCATATCATGATACCGTACC 59.597 45.833 17.60 13.55 0.00 3.34
4289 5248 4.093743 AGGCATATCATGATACCGTACCA 58.906 43.478 17.60 0.00 0.00 3.25
4290 5249 4.716784 AGGCATATCATGATACCGTACCAT 59.283 41.667 17.60 0.00 0.00 3.55
4291 5250 5.897250 AGGCATATCATGATACCGTACCATA 59.103 40.000 17.60 0.00 0.00 2.74
4292 5251 6.382859 AGGCATATCATGATACCGTACCATAA 59.617 38.462 17.60 0.00 0.00 1.90
4293 5252 6.479001 GGCATATCATGATACCGTACCATAAC 59.521 42.308 17.60 0.00 0.00 1.89
4294 5253 7.039270 GCATATCATGATACCGTACCATAACA 58.961 38.462 17.60 0.00 0.00 2.41
4295 5254 7.547722 GCATATCATGATACCGTACCATAACAA 59.452 37.037 17.60 0.00 0.00 2.83
4296 5255 9.430623 CATATCATGATACCGTACCATAACAAA 57.569 33.333 17.60 0.00 0.00 2.83
4299 5258 8.821147 TCATGATACCGTACCATAACAAATAC 57.179 34.615 0.00 0.00 0.00 1.89
4300 5259 8.644216 TCATGATACCGTACCATAACAAATACT 58.356 33.333 0.00 0.00 0.00 2.12
4301 5260 8.922676 CATGATACCGTACCATAACAAATACTC 58.077 37.037 0.00 0.00 0.00 2.59
4302 5261 7.436118 TGATACCGTACCATAACAAATACTCC 58.564 38.462 0.00 0.00 0.00 3.85
4303 5262 5.945144 ACCGTACCATAACAAATACTCCT 57.055 39.130 0.00 0.00 0.00 3.69
4304 5263 6.303903 ACCGTACCATAACAAATACTCCTT 57.696 37.500 0.00 0.00 0.00 3.36
4305 5264 6.343703 ACCGTACCATAACAAATACTCCTTC 58.656 40.000 0.00 0.00 0.00 3.46
4306 5265 5.756833 CCGTACCATAACAAATACTCCTTCC 59.243 44.000 0.00 0.00 0.00 3.46
4307 5266 5.461078 CGTACCATAACAAATACTCCTTCCG 59.539 44.000 0.00 0.00 0.00 4.30
4308 5267 5.431179 ACCATAACAAATACTCCTTCCGT 57.569 39.130 0.00 0.00 0.00 4.69
4309 5268 5.812286 ACCATAACAAATACTCCTTCCGTT 58.188 37.500 0.00 0.00 0.00 4.44
4310 5269 5.878669 ACCATAACAAATACTCCTTCCGTTC 59.121 40.000 0.00 0.00 0.00 3.95
4311 5270 5.296035 CCATAACAAATACTCCTTCCGTTCC 59.704 44.000 0.00 0.00 0.00 3.62
4312 5271 4.635699 AACAAATACTCCTTCCGTTCCT 57.364 40.909 0.00 0.00 0.00 3.36
4313 5272 5.750352 AACAAATACTCCTTCCGTTCCTA 57.250 39.130 0.00 0.00 0.00 2.94
4314 5273 5.750352 ACAAATACTCCTTCCGTTCCTAA 57.250 39.130 0.00 0.00 0.00 2.69
4315 5274 6.117975 ACAAATACTCCTTCCGTTCCTAAA 57.882 37.500 0.00 0.00 0.00 1.85
4316 5275 6.718294 ACAAATACTCCTTCCGTTCCTAAAT 58.282 36.000 0.00 0.00 0.00 1.40
4317 5276 7.854337 ACAAATACTCCTTCCGTTCCTAAATA 58.146 34.615 0.00 0.00 0.00 1.40
4318 5277 8.491958 ACAAATACTCCTTCCGTTCCTAAATAT 58.508 33.333 0.00 0.00 0.00 1.28
4319 5278 9.338622 CAAATACTCCTTCCGTTCCTAAATATT 57.661 33.333 0.00 0.00 0.00 1.28
4320 5279 9.916360 AAATACTCCTTCCGTTCCTAAATATTT 57.084 29.630 5.89 5.89 0.00 1.40
4321 5280 8.904099 ATACTCCTTCCGTTCCTAAATATTTG 57.096 34.615 11.05 1.40 0.00 2.32
4322 5281 6.718294 ACTCCTTCCGTTCCTAAATATTTGT 58.282 36.000 11.05 0.00 0.00 2.83
4323 5282 6.822170 ACTCCTTCCGTTCCTAAATATTTGTC 59.178 38.462 11.05 0.00 0.00 3.18
4324 5283 6.954232 TCCTTCCGTTCCTAAATATTTGTCT 58.046 36.000 11.05 0.00 0.00 3.41
4325 5284 7.399634 TCCTTCCGTTCCTAAATATTTGTCTT 58.600 34.615 11.05 0.00 0.00 3.01
4326 5285 7.886446 TCCTTCCGTTCCTAAATATTTGTCTTT 59.114 33.333 11.05 0.00 0.00 2.52
4327 5286 8.182227 CCTTCCGTTCCTAAATATTTGTCTTTC 58.818 37.037 11.05 0.00 0.00 2.62
4328 5287 8.857694 TTCCGTTCCTAAATATTTGTCTTTCT 57.142 30.769 11.05 0.00 0.00 2.52
4329 5288 9.947433 TTCCGTTCCTAAATATTTGTCTTTCTA 57.053 29.630 11.05 0.00 0.00 2.10
4330 5289 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
4331 5290 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
4365 5324 9.950680 ACAAGTGACTACATACAAAGAAAAATG 57.049 29.630 0.00 0.00 0.00 2.32
4368 5327 9.561069 AGTGACTACATACAAAGAAAAATGAGT 57.439 29.630 0.00 0.00 0.00 3.41
4369 5328 9.599322 GTGACTACATACAAAGAAAAATGAGTG 57.401 33.333 0.00 0.00 0.00 3.51
4370 5329 9.554395 TGACTACATACAAAGAAAAATGAGTGA 57.446 29.630 0.00 0.00 0.00 3.41
4378 5337 7.078228 ACAAAGAAAAATGAGTGAATCTACGC 58.922 34.615 0.00 0.00 0.00 4.42
4379 5338 7.041098 ACAAAGAAAAATGAGTGAATCTACGCT 60.041 33.333 0.00 0.00 0.00 5.07
4380 5339 6.654793 AGAAAAATGAGTGAATCTACGCTC 57.345 37.500 0.00 0.00 44.55 5.03
4381 5340 6.402222 AGAAAAATGAGTGAATCTACGCTCT 58.598 36.000 0.00 0.00 44.58 4.09
4382 5341 7.548097 AGAAAAATGAGTGAATCTACGCTCTA 58.452 34.615 0.00 0.00 44.58 2.43
4383 5342 8.035394 AGAAAAATGAGTGAATCTACGCTCTAA 58.965 33.333 0.00 0.00 44.58 2.10
4384 5343 8.547967 AAAAATGAGTGAATCTACGCTCTAAA 57.452 30.769 0.00 0.00 44.58 1.85
4385 5344 8.547967 AAAATGAGTGAATCTACGCTCTAAAA 57.452 30.769 0.00 0.00 44.58 1.52
4386 5345 8.723942 AAATGAGTGAATCTACGCTCTAAAAT 57.276 30.769 0.00 0.00 44.58 1.82
4387 5346 9.817809 AAATGAGTGAATCTACGCTCTAAAATA 57.182 29.630 0.00 0.00 44.58 1.40
4388 5347 9.988815 AATGAGTGAATCTACGCTCTAAAATAT 57.011 29.630 0.00 0.00 44.58 1.28
4415 5374 8.687292 TCTATATACATCCGTATGTGGTATCC 57.313 38.462 3.56 0.00 45.99 2.59
4416 5375 8.276477 TCTATATACATCCGTATGTGGTATCCA 58.724 37.037 3.56 0.00 45.99 3.41
4417 5376 7.914427 ATATACATCCGTATGTGGTATCCAT 57.086 36.000 3.56 0.00 45.99 3.41
4418 5377 4.974645 ACATCCGTATGTGGTATCCATT 57.025 40.909 0.00 0.00 44.79 3.16
4419 5378 5.304686 ACATCCGTATGTGGTATCCATTT 57.695 39.130 0.00 0.00 44.79 2.32
4420 5379 5.063204 ACATCCGTATGTGGTATCCATTTG 58.937 41.667 0.00 0.00 44.79 2.32
4421 5380 5.163248 ACATCCGTATGTGGTATCCATTTGA 60.163 40.000 0.00 0.00 44.79 2.69
4422 5381 5.360649 TCCGTATGTGGTATCCATTTGAA 57.639 39.130 0.00 0.00 35.28 2.69
4423 5382 5.746284 TCCGTATGTGGTATCCATTTGAAA 58.254 37.500 0.00 0.00 35.28 2.69
4424 5383 6.361433 TCCGTATGTGGTATCCATTTGAAAT 58.639 36.000 0.00 0.00 35.28 2.17
4425 5384 6.485313 TCCGTATGTGGTATCCATTTGAAATC 59.515 38.462 0.00 0.00 35.28 2.17
4426 5385 6.486657 CCGTATGTGGTATCCATTTGAAATCT 59.513 38.462 0.00 0.00 35.28 2.40
4427 5386 7.013274 CCGTATGTGGTATCCATTTGAAATCTT 59.987 37.037 0.00 0.00 35.28 2.40
4428 5387 8.405531 CGTATGTGGTATCCATTTGAAATCTTT 58.594 33.333 0.00 0.00 35.28 2.52
4431 5390 9.699410 ATGTGGTATCCATTTGAAATCTTTAGA 57.301 29.630 0.00 0.00 35.28 2.10
4432 5391 9.527157 TGTGGTATCCATTTGAAATCTTTAGAA 57.473 29.630 0.00 0.00 35.28 2.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
116 118 9.037737 TGACTCAAGTTTGTACTAACATTGTAC 57.962 33.333 19.88 14.82 40.27 2.90
117 119 9.037737 GTGACTCAAGTTTGTACTAACATTGTA 57.962 33.333 19.88 10.91 34.97 2.41
118 120 7.551262 TGTGACTCAAGTTTGTACTAACATTGT 59.449 33.333 19.88 12.97 34.97 2.71
119 121 7.915508 TGTGACTCAAGTTTGTACTAACATTG 58.084 34.615 19.88 18.47 34.97 2.82
120 122 8.677148 ATGTGACTCAAGTTTGTACTAACATT 57.323 30.769 19.88 9.91 34.97 2.71
121 123 9.944376 ATATGTGACTCAAGTTTGTACTAACAT 57.056 29.630 19.88 7.44 34.97 2.71
122 124 9.772973 AATATGTGACTCAAGTTTGTACTAACA 57.227 29.630 19.88 1.56 33.17 2.41
126 128 9.950680 CAAAAATATGTGACTCAAGTTTGTACT 57.049 29.630 0.00 0.00 35.68 2.73
156 158 9.213777 TGAGTCCACTAAAATAATACTCCATCT 57.786 33.333 0.00 0.00 32.75 2.90
207 209 3.728864 CGCCATTTTCCAAAGTCTCGATG 60.729 47.826 0.00 0.00 0.00 3.84
223 225 3.500680 ACGTCTGTGTAATTTTCGCCATT 59.499 39.130 0.00 0.00 0.00 3.16
328 330 2.151202 GACGGTCAAAGGAGAAATGCA 58.849 47.619 2.62 0.00 0.00 3.96
406 408 4.104086 ACTCCAGTAAAGGGACATCATCA 58.896 43.478 0.00 0.00 0.00 3.07
495 498 9.485206 AACGCACGTATCCTAATCTATAAAAAT 57.515 29.630 0.00 0.00 0.00 1.82
498 501 6.364165 GCAACGCACGTATCCTAATCTATAAA 59.636 38.462 0.00 0.00 0.00 1.40
506 509 3.816580 TGCAACGCACGTATCCTAA 57.183 47.368 0.00 0.00 31.71 2.69
544 547 6.102663 GTCGCTGTCTATTGCAATCCTATAT 58.897 40.000 16.86 0.00 0.00 0.86
545 548 5.470368 GTCGCTGTCTATTGCAATCCTATA 58.530 41.667 16.86 0.00 0.00 1.31
546 549 4.310769 GTCGCTGTCTATTGCAATCCTAT 58.689 43.478 16.86 0.00 0.00 2.57
547 550 3.717707 GTCGCTGTCTATTGCAATCCTA 58.282 45.455 16.86 0.00 0.00 2.94
548 551 2.555199 GTCGCTGTCTATTGCAATCCT 58.445 47.619 16.86 0.00 0.00 3.24
549 552 1.258982 CGTCGCTGTCTATTGCAATCC 59.741 52.381 16.86 5.98 0.00 3.01
550 553 1.258982 CCGTCGCTGTCTATTGCAATC 59.741 52.381 16.86 2.07 0.00 2.67
551 554 1.290203 CCGTCGCTGTCTATTGCAAT 58.710 50.000 17.56 17.56 0.00 3.56
552 555 0.037697 ACCGTCGCTGTCTATTGCAA 60.038 50.000 0.00 0.00 0.00 4.08
553 556 0.037697 AACCGTCGCTGTCTATTGCA 60.038 50.000 0.00 0.00 0.00 4.08
554 557 0.645868 GAACCGTCGCTGTCTATTGC 59.354 55.000 0.00 0.00 0.00 3.56
555 558 1.654105 GTGAACCGTCGCTGTCTATTG 59.346 52.381 0.00 0.00 0.00 1.90
556 559 1.544691 AGTGAACCGTCGCTGTCTATT 59.455 47.619 0.00 0.00 43.12 1.73
557 560 1.174783 AGTGAACCGTCGCTGTCTAT 58.825 50.000 0.00 0.00 43.12 1.98
558 561 2.637521 AGTGAACCGTCGCTGTCTA 58.362 52.632 0.00 0.00 43.12 2.59
559 562 3.444737 AGTGAACCGTCGCTGTCT 58.555 55.556 0.00 0.00 43.12 3.41
563 566 4.681978 GGCCAGTGAACCGTCGCT 62.682 66.667 0.00 0.00 45.72 4.93
564 567 4.980805 TGGCCAGTGAACCGTCGC 62.981 66.667 0.00 0.00 34.24 5.19
565 568 2.047274 ATGGCCAGTGAACCGTCG 60.047 61.111 13.05 0.00 0.00 5.12
566 569 0.392998 ATCATGGCCAGTGAACCGTC 60.393 55.000 13.05 0.00 0.00 4.79
567 570 0.677731 CATCATGGCCAGTGAACCGT 60.678 55.000 13.05 0.00 0.00 4.83
568 571 1.378882 CCATCATGGCCAGTGAACCG 61.379 60.000 13.05 8.24 0.00 4.44
569 572 2.496942 CCATCATGGCCAGTGAACC 58.503 57.895 13.05 0.00 0.00 3.62
579 582 1.661617 CGTTTGCAAATGCCATCATGG 59.338 47.619 17.95 0.00 41.55 3.66
580 583 1.061421 GCGTTTGCAAATGCCATCATG 59.939 47.619 35.79 11.09 43.39 3.07
581 584 1.361793 GCGTTTGCAAATGCCATCAT 58.638 45.000 35.79 0.00 43.39 2.45
582 585 2.824952 GCGTTTGCAAATGCCATCA 58.175 47.368 35.79 1.94 43.39 3.07
588 591 1.274798 GGACACGGCGTTTGCAAATG 61.275 55.000 24.17 24.17 45.35 2.32
589 592 1.007849 GGACACGGCGTTTGCAAAT 60.008 52.632 16.21 0.00 45.35 2.32
590 593 2.409651 GGACACGGCGTTTGCAAA 59.590 55.556 11.19 8.05 45.35 3.68
591 594 3.943034 CGGACACGGCGTTTGCAA 61.943 61.111 17.49 0.00 45.35 4.08
601 604 3.017265 ACACTAAAACTACCGGACACG 57.983 47.619 9.46 0.00 40.55 4.49
602 605 4.024641 CCAAACACTAAAACTACCGGACAC 60.025 45.833 9.46 0.00 0.00 3.67
603 606 4.128643 CCAAACACTAAAACTACCGGACA 58.871 43.478 9.46 0.00 0.00 4.02
604 607 3.499537 CCCAAACACTAAAACTACCGGAC 59.500 47.826 9.46 0.00 0.00 4.79
605 608 3.390639 TCCCAAACACTAAAACTACCGGA 59.609 43.478 9.46 0.00 0.00 5.14
606 609 3.742385 TCCCAAACACTAAAACTACCGG 58.258 45.455 0.00 0.00 0.00 5.28
607 610 4.379082 GCATCCCAAACACTAAAACTACCG 60.379 45.833 0.00 0.00 0.00 4.02
608 611 4.082408 GGCATCCCAAACACTAAAACTACC 60.082 45.833 0.00 0.00 0.00 3.18
609 612 4.521256 TGGCATCCCAAACACTAAAACTAC 59.479 41.667 0.00 0.00 38.46 2.73
610 613 4.730966 TGGCATCCCAAACACTAAAACTA 58.269 39.130 0.00 0.00 38.46 2.24
611 614 3.571590 TGGCATCCCAAACACTAAAACT 58.428 40.909 0.00 0.00 38.46 2.66
612 615 4.535526 ATGGCATCCCAAACACTAAAAC 57.464 40.909 0.00 0.00 46.14 2.43
613 616 5.559148 AAATGGCATCCCAAACACTAAAA 57.441 34.783 0.00 0.00 46.14 1.52
614 617 5.559148 AAAATGGCATCCCAAACACTAAA 57.441 34.783 0.00 0.00 46.14 1.85
615 618 5.559148 AAAAATGGCATCCCAAACACTAA 57.441 34.783 0.00 0.00 46.14 2.24
644 647 9.389755 ACTAAACTAAACAAAATGCCATGTTTT 57.610 25.926 8.91 0.00 44.91 2.43
646 649 7.042119 GCACTAAACTAAACAAAATGCCATGTT 60.042 33.333 0.00 0.00 41.31 2.71
647 650 6.423604 GCACTAAACTAAACAAAATGCCATGT 59.576 34.615 0.00 0.00 0.00 3.21
648 651 6.423302 TGCACTAAACTAAACAAAATGCCATG 59.577 34.615 0.00 0.00 0.00 3.66
649 652 6.520272 TGCACTAAACTAAACAAAATGCCAT 58.480 32.000 0.00 0.00 0.00 4.40
650 653 5.907207 TGCACTAAACTAAACAAAATGCCA 58.093 33.333 0.00 0.00 0.00 4.92
651 654 7.420184 AATGCACTAAACTAAACAAAATGCC 57.580 32.000 0.00 0.00 0.00 4.40
652 655 9.715123 AAAAATGCACTAAACTAAACAAAATGC 57.285 25.926 0.00 0.00 0.00 3.56
675 678 1.139256 GGCAGTTTTTCGGGGGAAAAA 59.861 47.619 9.87 9.87 40.44 1.94
676 679 0.753867 GGCAGTTTTTCGGGGGAAAA 59.246 50.000 0.00 0.00 32.86 2.29
677 680 0.397254 TGGCAGTTTTTCGGGGGAAA 60.397 50.000 0.00 0.00 0.00 3.13
678 681 1.110518 GTGGCAGTTTTTCGGGGGAA 61.111 55.000 0.00 0.00 0.00 3.97
679 682 1.529713 GTGGCAGTTTTTCGGGGGA 60.530 57.895 0.00 0.00 0.00 4.81
680 683 2.570284 GGTGGCAGTTTTTCGGGGG 61.570 63.158 0.00 0.00 0.00 5.40
681 684 2.914908 CGGTGGCAGTTTTTCGGGG 61.915 63.158 0.00 0.00 0.00 5.73
682 685 2.125202 GACGGTGGCAGTTTTTCGGG 62.125 60.000 0.00 0.00 0.00 5.14
683 686 1.281656 GACGGTGGCAGTTTTTCGG 59.718 57.895 0.00 0.00 0.00 4.30
684 687 0.316689 GTGACGGTGGCAGTTTTTCG 60.317 55.000 0.00 0.00 0.00 3.46
685 688 0.736053 TGTGACGGTGGCAGTTTTTC 59.264 50.000 0.00 0.00 0.00 2.29
686 689 0.738389 CTGTGACGGTGGCAGTTTTT 59.262 50.000 0.00 0.00 0.00 1.94
687 690 1.724582 GCTGTGACGGTGGCAGTTTT 61.725 55.000 9.36 0.00 33.18 2.43
688 691 2.186826 GCTGTGACGGTGGCAGTTT 61.187 57.895 9.36 0.00 33.18 2.66
689 692 2.591715 GCTGTGACGGTGGCAGTT 60.592 61.111 9.36 0.00 33.18 3.16
690 693 3.106986 AAGCTGTGACGGTGGCAGT 62.107 57.895 9.36 0.00 33.18 4.40
691 694 2.281070 AAGCTGTGACGGTGGCAG 60.281 61.111 0.00 4.69 0.00 4.85
692 695 2.395988 ATCAAGCTGTGACGGTGGCA 62.396 55.000 0.00 0.00 39.72 4.92
693 696 1.237285 AATCAAGCTGTGACGGTGGC 61.237 55.000 0.00 0.00 39.72 5.01
694 697 0.798776 GAATCAAGCTGTGACGGTGG 59.201 55.000 0.00 0.00 39.72 4.61
695 698 1.462283 CAGAATCAAGCTGTGACGGTG 59.538 52.381 0.00 0.00 39.72 4.94
696 699 1.070758 ACAGAATCAAGCTGTGACGGT 59.929 47.619 0.00 0.00 44.39 4.83
697 700 1.800805 ACAGAATCAAGCTGTGACGG 58.199 50.000 0.00 0.00 44.39 4.79
702 705 2.704572 GTAGCCACAGAATCAAGCTGT 58.295 47.619 0.00 0.00 46.86 4.40
703 706 1.662629 CGTAGCCACAGAATCAAGCTG 59.337 52.381 0.00 0.00 39.26 4.24
704 707 1.550524 TCGTAGCCACAGAATCAAGCT 59.449 47.619 0.00 0.00 37.58 3.74
705 708 1.929836 CTCGTAGCCACAGAATCAAGC 59.070 52.381 0.00 0.00 0.00 4.01
706 709 2.544685 CCTCGTAGCCACAGAATCAAG 58.455 52.381 0.00 0.00 0.00 3.02
707 710 1.207089 CCCTCGTAGCCACAGAATCAA 59.793 52.381 0.00 0.00 0.00 2.57
708 711 0.824109 CCCTCGTAGCCACAGAATCA 59.176 55.000 0.00 0.00 0.00 2.57
709 712 0.105039 CCCCTCGTAGCCACAGAATC 59.895 60.000 0.00 0.00 0.00 2.52
710 713 1.338136 CCCCCTCGTAGCCACAGAAT 61.338 60.000 0.00 0.00 0.00 2.40
711 714 1.987855 CCCCCTCGTAGCCACAGAA 60.988 63.158 0.00 0.00 0.00 3.02
712 715 2.363795 CCCCCTCGTAGCCACAGA 60.364 66.667 0.00 0.00 0.00 3.41
713 716 2.240162 GAACCCCCTCGTAGCCACAG 62.240 65.000 0.00 0.00 0.00 3.66
714 717 2.203877 AACCCCCTCGTAGCCACA 60.204 61.111 0.00 0.00 0.00 4.17
715 718 2.582978 GAACCCCCTCGTAGCCAC 59.417 66.667 0.00 0.00 0.00 5.01
716 719 3.072468 CGAACCCCCTCGTAGCCA 61.072 66.667 0.00 0.00 34.08 4.75
717 720 4.525949 GCGAACCCCCTCGTAGCC 62.526 72.222 0.00 0.00 40.99 3.93
718 721 2.517484 AAAGCGAACCCCCTCGTAGC 62.517 60.000 0.00 0.00 40.99 3.58
719 722 0.739813 CAAAGCGAACCCCCTCGTAG 60.740 60.000 0.00 0.00 40.99 3.51
720 723 1.294138 CAAAGCGAACCCCCTCGTA 59.706 57.895 0.00 0.00 40.99 3.43
721 724 2.032071 CAAAGCGAACCCCCTCGT 59.968 61.111 0.00 0.00 40.99 4.18
722 725 2.536997 ATCCAAAGCGAACCCCCTCG 62.537 60.000 0.00 0.00 41.84 4.63
723 726 0.323451 AATCCAAAGCGAACCCCCTC 60.323 55.000 0.00 0.00 0.00 4.30
724 727 0.114364 AAATCCAAAGCGAACCCCCT 59.886 50.000 0.00 0.00 0.00 4.79
725 728 0.530744 GAAATCCAAAGCGAACCCCC 59.469 55.000 0.00 0.00 0.00 5.40
726 729 0.530744 GGAAATCCAAAGCGAACCCC 59.469 55.000 0.00 0.00 35.64 4.95
727 730 1.472878 GAGGAAATCCAAAGCGAACCC 59.527 52.381 1.67 0.00 38.89 4.11
728 731 2.921634 GAGGAAATCCAAAGCGAACC 57.078 50.000 1.67 0.00 38.89 3.62
739 742 2.939103 CGACCATTCACAGGAGGAAATC 59.061 50.000 0.00 0.00 0.00 2.17
740 743 2.941415 GCGACCATTCACAGGAGGAAAT 60.941 50.000 0.00 0.00 0.00 2.17
741 744 1.610624 GCGACCATTCACAGGAGGAAA 60.611 52.381 0.00 0.00 0.00 3.13
742 745 0.036388 GCGACCATTCACAGGAGGAA 60.036 55.000 0.00 0.00 0.00 3.36
743 746 1.596934 GCGACCATTCACAGGAGGA 59.403 57.895 0.00 0.00 0.00 3.71
744 747 1.450312 GGCGACCATTCACAGGAGG 60.450 63.158 0.00 0.00 0.00 4.30
745 748 0.321564 TTGGCGACCATTCACAGGAG 60.322 55.000 0.00 0.00 31.53 3.69
746 749 0.109532 TTTGGCGACCATTCACAGGA 59.890 50.000 0.00 0.00 31.53 3.86
747 750 1.176527 ATTTGGCGACCATTCACAGG 58.823 50.000 0.00 0.00 31.53 4.00
748 751 2.223340 GCTATTTGGCGACCATTCACAG 60.223 50.000 0.00 0.00 31.53 3.66
749 752 1.742831 GCTATTTGGCGACCATTCACA 59.257 47.619 0.00 0.00 31.53 3.58
750 753 1.742831 TGCTATTTGGCGACCATTCAC 59.257 47.619 0.00 0.00 31.53 3.18
751 754 2.121291 TGCTATTTGGCGACCATTCA 57.879 45.000 0.00 0.00 31.53 2.57
752 755 3.715628 AATGCTATTTGGCGACCATTC 57.284 42.857 0.00 0.00 31.53 2.67
753 756 3.569701 CCTAATGCTATTTGGCGACCATT 59.430 43.478 0.00 0.00 31.53 3.16
754 757 3.149196 CCTAATGCTATTTGGCGACCAT 58.851 45.455 0.00 0.00 31.53 3.55
755 758 2.571212 CCTAATGCTATTTGGCGACCA 58.429 47.619 0.00 0.00 34.52 4.02
756 759 1.880027 CCCTAATGCTATTTGGCGACC 59.120 52.381 0.00 0.00 34.52 4.79
757 760 2.846193 TCCCTAATGCTATTTGGCGAC 58.154 47.619 0.00 0.00 34.52 5.19
758 761 3.569194 TTCCCTAATGCTATTTGGCGA 57.431 42.857 0.00 0.00 34.52 5.54
759 762 5.066505 GGATATTCCCTAATGCTATTTGGCG 59.933 44.000 0.00 0.00 34.52 5.69
760 763 6.456795 GGATATTCCCTAATGCTATTTGGC 57.543 41.667 0.00 0.00 0.00 4.52
783 786 9.480053 CATGCATATTCCCTAATGTTTTTAAGG 57.520 33.333 0.00 0.00 0.00 2.69
784 787 8.981647 GCATGCATATTCCCTAATGTTTTTAAG 58.018 33.333 14.21 0.00 0.00 1.85
785 788 8.481314 TGCATGCATATTCCCTAATGTTTTTAA 58.519 29.630 18.46 0.00 0.00 1.52
786 789 8.016301 TGCATGCATATTCCCTAATGTTTTTA 57.984 30.769 18.46 0.00 0.00 1.52
787 790 6.887013 TGCATGCATATTCCCTAATGTTTTT 58.113 32.000 18.46 0.00 0.00 1.94
788 791 6.482898 TGCATGCATATTCCCTAATGTTTT 57.517 33.333 18.46 0.00 0.00 2.43
789 792 6.675413 ATGCATGCATATTCCCTAATGTTT 57.325 33.333 31.35 2.06 34.49 2.83
790 793 6.950041 ACTATGCATGCATATTCCCTAATGTT 59.050 34.615 34.35 12.66 38.13 2.71
791 794 6.487828 ACTATGCATGCATATTCCCTAATGT 58.512 36.000 34.35 23.56 38.13 2.71
792 795 7.772292 AGTACTATGCATGCATATTCCCTAATG 59.228 37.037 34.35 23.00 38.13 1.90
793 796 7.865820 AGTACTATGCATGCATATTCCCTAAT 58.134 34.615 34.35 14.76 38.13 1.73
794 797 7.257790 AGTACTATGCATGCATATTCCCTAA 57.742 36.000 34.35 16.45 38.13 2.69
795 798 6.127054 GGAGTACTATGCATGCATATTCCCTA 60.127 42.308 34.35 17.13 38.13 3.53
796 799 5.338708 GGAGTACTATGCATGCATATTCCCT 60.339 44.000 34.35 26.51 38.13 4.20
797 800 4.878397 GGAGTACTATGCATGCATATTCCC 59.122 45.833 34.35 25.28 38.13 3.97
798 801 5.738909 AGGAGTACTATGCATGCATATTCC 58.261 41.667 34.35 31.73 38.13 3.01
799 802 7.551585 AGTAGGAGTACTATGCATGCATATTC 58.448 38.462 34.35 26.68 37.76 1.75
800 803 7.487822 AGTAGGAGTACTATGCATGCATATT 57.512 36.000 34.35 30.62 37.76 1.28
801 804 7.836685 ACTAGTAGGAGTACTATGCATGCATAT 59.163 37.037 34.35 25.93 40.33 1.78
802 805 7.175797 ACTAGTAGGAGTACTATGCATGCATA 58.824 38.462 32.64 32.64 40.33 3.14
803 806 6.013379 ACTAGTAGGAGTACTATGCATGCAT 58.987 40.000 33.92 33.92 40.33 3.96
804 807 5.386060 ACTAGTAGGAGTACTATGCATGCA 58.614 41.667 25.04 25.04 40.33 3.96
805 808 5.968528 ACTAGTAGGAGTACTATGCATGC 57.031 43.478 11.82 11.82 40.33 4.06
978 985 8.140628 TGCTCAAGATTATAGAAGTCTGATGAC 58.859 37.037 0.00 0.00 43.22 3.06
998 1005 3.065648 TCGTGTATGTATAGCGTGCTCAA 59.934 43.478 0.00 0.00 0.00 3.02
999 1006 2.614983 TCGTGTATGTATAGCGTGCTCA 59.385 45.455 0.00 0.00 0.00 4.26
1060 1067 4.416738 GGAGGAGCAGGTGGTGGC 62.417 72.222 0.00 0.00 0.00 5.01
1111 1118 1.745653 GAATCAAACCTACCCTGCTGC 59.254 52.381 0.00 0.00 0.00 5.25
1112 1119 3.274288 GAGAATCAAACCTACCCTGCTG 58.726 50.000 0.00 0.00 33.17 4.41
1113 1120 2.912956 TGAGAATCAAACCTACCCTGCT 59.087 45.455 0.00 0.00 45.97 4.24
1146 1164 3.294079 TCACGGGGAGAAACGAAAC 57.706 52.632 0.00 0.00 0.00 2.78
1263 1283 6.596888 CAGGTCAACAGAATCATCAACAGTAT 59.403 38.462 0.00 0.00 0.00 2.12
1265 1285 4.758674 CAGGTCAACAGAATCATCAACAGT 59.241 41.667 0.00 0.00 0.00 3.55
1325 1345 4.722700 ACGCCGCAAAGGAGCCAT 62.723 61.111 0.00 0.00 44.30 4.40
1339 1359 2.470999 CACATAACAACAAAGCCAACGC 59.529 45.455 0.00 0.00 0.00 4.84
1387 1407 0.321122 ACAGCAGCTGAGCCTGTAAC 60.321 55.000 29.70 0.00 35.18 2.50
1416 1436 2.029380 GGAAAACGGAAGGGGTGAATTG 60.029 50.000 0.00 0.00 0.00 2.32
1468 1488 5.933790 TCAACACATACGGAATTAGCAAAC 58.066 37.500 0.00 0.00 0.00 2.93
1700 1825 9.942526 ATCCTTAATTCCAGTTCTAATTCCAAT 57.057 29.630 0.00 0.00 0.00 3.16
1736 1861 7.251704 ACGAATTCGCATAAGAAGATTTCAT 57.748 32.000 27.03 0.00 44.43 2.57
1755 1880 6.814644 TCAATTTCGACACCAATACTACGAAT 59.185 34.615 0.00 0.00 38.97 3.34
1838 2222 7.389053 GGCTGTCCAAATTCTATCCTTATACAG 59.611 40.741 0.00 0.00 34.14 2.74
1860 2244 5.294306 ACGATGTTAACAATGACATAGGCTG 59.706 40.000 13.23 0.00 36.04 4.85
1918 2302 7.499232 AGCGAACTAACAGCATAATAAGGAATT 59.501 33.333 0.00 0.00 0.00 2.17
1923 2307 7.848051 CAGAAAGCGAACTAACAGCATAATAAG 59.152 37.037 0.00 0.00 0.00 1.73
1926 2310 5.643777 ACAGAAAGCGAACTAACAGCATAAT 59.356 36.000 0.00 0.00 0.00 1.28
1927 2311 4.994852 ACAGAAAGCGAACTAACAGCATAA 59.005 37.500 0.00 0.00 0.00 1.90
1931 2315 3.988517 ACTACAGAAAGCGAACTAACAGC 59.011 43.478 0.00 0.00 0.00 4.40
1937 2321 4.058817 CCTTGAACTACAGAAAGCGAACT 58.941 43.478 0.00 0.00 0.00 3.01
1938 2322 3.364068 GCCTTGAACTACAGAAAGCGAAC 60.364 47.826 0.00 0.00 0.00 3.95
1940 2324 2.037251 AGCCTTGAACTACAGAAAGCGA 59.963 45.455 0.00 0.00 0.00 4.93
1941 2325 2.417719 AGCCTTGAACTACAGAAAGCG 58.582 47.619 0.00 0.00 0.00 4.68
1942 2326 5.238583 TCTAAGCCTTGAACTACAGAAAGC 58.761 41.667 0.00 0.00 0.00 3.51
1943 2327 6.314896 CCATCTAAGCCTTGAACTACAGAAAG 59.685 42.308 0.00 0.00 0.00 2.62
1945 2329 5.338381 CCCATCTAAGCCTTGAACTACAGAA 60.338 44.000 0.00 0.00 0.00 3.02
1947 2331 4.446371 CCCATCTAAGCCTTGAACTACAG 58.554 47.826 0.00 0.00 0.00 2.74
1949 2333 3.454812 TCCCCATCTAAGCCTTGAACTAC 59.545 47.826 0.00 0.00 0.00 2.73
1950 2334 3.731431 TCCCCATCTAAGCCTTGAACTA 58.269 45.455 0.00 0.00 0.00 2.24
1951 2335 2.562296 TCCCCATCTAAGCCTTGAACT 58.438 47.619 0.00 0.00 0.00 3.01
1952 2336 3.366052 TTCCCCATCTAAGCCTTGAAC 57.634 47.619 0.00 0.00 0.00 3.18
2035 2419 9.095700 AGGAGGAATATCTCTATAAACCTGAAC 57.904 37.037 0.00 0.00 31.61 3.18
2047 2431 4.442192 GCGAACACAAGGAGGAATATCTCT 60.442 45.833 0.00 0.00 34.39 3.10
2067 2451 0.537143 ACTGGCCAGAACAATTGCGA 60.537 50.000 39.19 0.00 0.00 5.10
2143 2527 5.440207 TGATCCTTGATGATTTGACCAGA 57.560 39.130 0.00 0.00 0.00 3.86
2644 3044 1.358759 GAGGTGGTGGCAAAACACG 59.641 57.895 10.74 0.00 42.23 4.49
2930 3330 5.122239 GCATCCTTTGCGTGCTATATATTGA 59.878 40.000 0.00 0.00 42.54 2.57
2931 3331 5.327091 GCATCCTTTGCGTGCTATATATTG 58.673 41.667 0.00 0.00 42.54 1.90
2932 3332 5.551760 GCATCCTTTGCGTGCTATATATT 57.448 39.130 0.00 0.00 42.54 1.28
2992 3392 1.492176 AGGGATGTATTGCAGGACCAG 59.508 52.381 0.00 0.00 0.00 4.00
3066 3466 3.422303 GCATCGCACGCTTGGACA 61.422 61.111 0.00 0.00 0.00 4.02
3152 3552 2.332312 TTTACGCAGCCTGGTGTGGT 62.332 55.000 13.69 7.42 32.89 4.16
3302 3702 9.463443 GCTTCAAGTTGACATAATAAACTGTTT 57.537 29.630 4.68 10.98 34.46 2.83
3419 3820 2.092049 TGACGAGACTAGAGCCCCATTA 60.092 50.000 0.00 0.00 0.00 1.90
3420 3821 1.342076 TGACGAGACTAGAGCCCCATT 60.342 52.381 0.00 0.00 0.00 3.16
3452 3853 3.446161 ACCGACCGAAATCTCATAGTCAA 59.554 43.478 0.00 0.00 0.00 3.18
3460 3861 2.531206 CTCTTCACCGACCGAAATCTC 58.469 52.381 0.00 0.00 0.00 2.75
3481 3882 3.696548 GGCAAAGGGGACAGAAAATCTAG 59.303 47.826 0.00 0.00 0.00 2.43
3521 3923 1.005450 TCTTTGGTAGGGGCAATCCAC 59.995 52.381 0.00 0.00 37.22 4.02
3591 3995 3.181470 TGGCCAAAGTTTTTCTAGCCAAC 60.181 43.478 0.61 0.00 41.09 3.77
3633 4540 8.367156 AGAATACCAATGTTTGCAATAGTGTTT 58.633 29.630 0.00 0.00 0.00 2.83
3634 4541 7.895759 AGAATACCAATGTTTGCAATAGTGTT 58.104 30.769 0.00 0.00 0.00 3.32
3732 4641 9.770097 GACCTAAAAGAATGTATCATCTCATGA 57.230 33.333 0.00 0.00 44.55 3.07
3740 4649 8.049117 AGCTCAATGACCTAAAAGAATGTATCA 58.951 33.333 0.00 0.00 0.00 2.15
3755 4664 6.970484 TCACTTAAGAAAAAGCTCAATGACC 58.030 36.000 10.09 0.00 0.00 4.02
3764 4673 5.531287 TGGAGTCCTTCACTTAAGAAAAAGC 59.469 40.000 10.09 0.00 37.38 3.51
3767 4676 5.054477 CGTGGAGTCCTTCACTTAAGAAAA 58.946 41.667 10.09 1.97 37.38 2.29
3830 4739 8.485578 AAAAATGGAGGGAGTACAACATTTTA 57.514 30.769 11.93 0.00 43.57 1.52
3842 4751 5.336770 GCCTTGTTTAGAAAAATGGAGGGAG 60.337 44.000 2.08 0.00 0.00 4.30
3844 4753 4.322725 GGCCTTGTTTAGAAAAATGGAGGG 60.323 45.833 0.00 0.00 0.00 4.30
3848 4757 5.213891 AGTGGCCTTGTTTAGAAAAATGG 57.786 39.130 3.32 0.00 0.00 3.16
3852 4761 5.669164 ACAAAGTGGCCTTGTTTAGAAAA 57.331 34.783 3.32 0.00 0.00 2.29
3856 4765 4.647424 TGAACAAAGTGGCCTTGTTTAG 57.353 40.909 19.30 7.57 0.00 1.85
3857 4766 4.220821 TGTTGAACAAAGTGGCCTTGTTTA 59.779 37.500 19.30 14.11 0.00 2.01
3934 4877 9.190858 GCAACAAAAAGTATGTCATTGAATGTA 57.809 29.630 4.93 0.00 0.00 2.29
3935 4878 7.710044 TGCAACAAAAAGTATGTCATTGAATGT 59.290 29.630 4.93 0.00 0.00 2.71
4005 4962 6.998112 TCCCTCCATGTCTATATATAAGGCT 58.002 40.000 0.00 0.00 0.00 4.58
4069 5026 1.372997 TGCTTGCGGTCGAGAACTC 60.373 57.895 0.00 0.00 0.00 3.01
4070 5027 1.664965 GTGCTTGCGGTCGAGAACT 60.665 57.895 0.00 0.00 30.66 3.01
4071 5028 1.495584 TTGTGCTTGCGGTCGAGAAC 61.496 55.000 0.00 0.00 33.48 3.01
4072 5029 1.221466 CTTGTGCTTGCGGTCGAGAA 61.221 55.000 0.00 0.00 0.00 2.87
4073 5030 1.664649 CTTGTGCTTGCGGTCGAGA 60.665 57.895 0.00 0.00 0.00 4.04
4074 5031 2.856032 CTTGTGCTTGCGGTCGAG 59.144 61.111 0.00 0.00 0.00 4.04
4075 5032 3.345808 GCTTGTGCTTGCGGTCGA 61.346 61.111 0.00 0.00 36.03 4.20
4076 5033 3.179869 TTGCTTGTGCTTGCGGTCG 62.180 57.895 0.00 0.00 40.48 4.79
4109 5066 2.650322 AGTCACTCTACCCCTCTCTTCA 59.350 50.000 0.00 0.00 0.00 3.02
4133 5092 6.599638 GGTATAGGGTAAGCATGATTTGATCC 59.400 42.308 0.00 0.00 0.00 3.36
4134 5093 7.119846 GTGGTATAGGGTAAGCATGATTTGATC 59.880 40.741 0.00 0.00 0.00 2.92
4154 5113 0.245539 CAAGACGTCGGTGGTGGTAT 59.754 55.000 10.46 0.00 0.00 2.73
4164 5123 3.323243 ACAACCTTATTCCAAGACGTCG 58.677 45.455 10.46 0.00 0.00 5.12
4170 5129 7.088589 CAACTATGGACAACCTTATTCCAAG 57.911 40.000 0.00 0.00 42.71 3.61
4203 5162 8.482943 AGTTGACATGCACAATAGTATTAGGTA 58.517 33.333 8.72 0.00 0.00 3.08
4206 5165 8.982685 CCTAGTTGACATGCACAATAGTATTAG 58.017 37.037 8.72 0.00 0.00 1.73
4209 5168 5.760253 GCCTAGTTGACATGCACAATAGTAT 59.240 40.000 8.72 0.00 0.00 2.12
4211 5170 3.941483 GCCTAGTTGACATGCACAATAGT 59.059 43.478 8.72 1.88 0.00 2.12
4212 5171 3.940852 TGCCTAGTTGACATGCACAATAG 59.059 43.478 8.72 10.26 0.00 1.73
4240 5199 8.523915 TCTTTTGTATTCTATGCCACATCATT 57.476 30.769 0.00 0.00 0.00 2.57
4243 5202 7.041508 CCTCTCTTTTGTATTCTATGCCACATC 60.042 40.741 0.00 0.00 0.00 3.06
4249 5208 6.874288 ATGCCTCTCTTTTGTATTCTATGC 57.126 37.500 0.00 0.00 0.00 3.14
4250 5209 9.716531 TGATATGCCTCTCTTTTGTATTCTATG 57.283 33.333 0.00 0.00 0.00 2.23
4252 5211 9.716531 CATGATATGCCTCTCTTTTGTATTCTA 57.283 33.333 0.00 0.00 0.00 2.10
4253 5212 8.435187 TCATGATATGCCTCTCTTTTGTATTCT 58.565 33.333 0.00 0.00 0.00 2.40
4256 5215 9.664332 GTATCATGATATGCCTCTCTTTTGTAT 57.336 33.333 18.18 0.00 0.00 2.29
4257 5216 8.097038 GGTATCATGATATGCCTCTCTTTTGTA 58.903 37.037 18.18 0.00 0.00 2.41
4259 5218 6.091849 CGGTATCATGATATGCCTCTCTTTTG 59.908 42.308 18.18 0.00 30.03 2.44
4261 5220 5.247110 ACGGTATCATGATATGCCTCTCTTT 59.753 40.000 18.18 0.00 30.03 2.52
4262 5221 4.774726 ACGGTATCATGATATGCCTCTCTT 59.225 41.667 18.18 0.00 30.03 2.85
4263 5222 4.348486 ACGGTATCATGATATGCCTCTCT 58.652 43.478 18.18 0.00 30.03 3.10
4264 5223 4.727507 ACGGTATCATGATATGCCTCTC 57.272 45.455 18.18 3.97 30.03 3.20
4265 5224 4.402793 GGTACGGTATCATGATATGCCTCT 59.597 45.833 18.18 6.66 30.03 3.69
4266 5225 4.159693 TGGTACGGTATCATGATATGCCTC 59.840 45.833 18.18 5.34 30.03 4.70
4267 5226 4.093743 TGGTACGGTATCATGATATGCCT 58.906 43.478 18.18 8.50 30.03 4.75
4268 5227 4.465632 TGGTACGGTATCATGATATGCC 57.534 45.455 18.18 14.94 0.00 4.40
4269 5228 7.039270 TGTTATGGTACGGTATCATGATATGC 58.961 38.462 21.28 6.73 30.79 3.14
4270 5229 8.996024 TTGTTATGGTACGGTATCATGATATG 57.004 34.615 21.28 15.46 30.79 1.78
4273 5232 9.431887 GTATTTGTTATGGTACGGTATCATGAT 57.568 33.333 21.28 13.81 30.79 2.45
4274 5233 8.644216 AGTATTTGTTATGGTACGGTATCATGA 58.356 33.333 21.28 12.24 30.79 3.07
4275 5234 8.827177 AGTATTTGTTATGGTACGGTATCATG 57.173 34.615 21.28 0.00 30.79 3.07
4276 5235 8.092687 GGAGTATTTGTTATGGTACGGTATCAT 58.907 37.037 17.35 17.35 33.31 2.45
4277 5236 7.288389 AGGAGTATTTGTTATGGTACGGTATCA 59.712 37.037 3.17 3.17 0.00 2.15
4278 5237 7.664758 AGGAGTATTTGTTATGGTACGGTATC 58.335 38.462 0.00 0.00 0.00 2.24
4279 5238 7.607615 AGGAGTATTTGTTATGGTACGGTAT 57.392 36.000 0.00 0.00 0.00 2.73
4280 5239 7.417797 GGAAGGAGTATTTGTTATGGTACGGTA 60.418 40.741 0.00 0.00 0.00 4.02
4281 5240 5.945144 AGGAGTATTTGTTATGGTACGGT 57.055 39.130 0.00 0.00 0.00 4.83
4282 5241 5.756833 GGAAGGAGTATTTGTTATGGTACGG 59.243 44.000 0.00 0.00 0.00 4.02
4283 5242 5.461078 CGGAAGGAGTATTTGTTATGGTACG 59.539 44.000 0.00 0.00 0.00 3.67
4284 5243 6.343703 ACGGAAGGAGTATTTGTTATGGTAC 58.656 40.000 0.00 0.00 0.00 3.34
4285 5244 6.549433 ACGGAAGGAGTATTTGTTATGGTA 57.451 37.500 0.00 0.00 0.00 3.25
4286 5245 5.431179 ACGGAAGGAGTATTTGTTATGGT 57.569 39.130 0.00 0.00 0.00 3.55
4287 5246 5.296035 GGAACGGAAGGAGTATTTGTTATGG 59.704 44.000 0.00 0.00 0.00 2.74
4288 5247 6.113411 AGGAACGGAAGGAGTATTTGTTATG 58.887 40.000 0.00 0.00 0.00 1.90
4289 5248 6.309389 AGGAACGGAAGGAGTATTTGTTAT 57.691 37.500 0.00 0.00 0.00 1.89
4290 5249 5.750352 AGGAACGGAAGGAGTATTTGTTA 57.250 39.130 0.00 0.00 0.00 2.41
4291 5250 4.635699 AGGAACGGAAGGAGTATTTGTT 57.364 40.909 0.00 0.00 0.00 2.83
4292 5251 5.750352 TTAGGAACGGAAGGAGTATTTGT 57.250 39.130 0.00 0.00 0.00 2.83
4293 5252 8.904099 ATATTTAGGAACGGAAGGAGTATTTG 57.096 34.615 0.00 0.00 0.00 2.32
4294 5253 9.916360 AAATATTTAGGAACGGAAGGAGTATTT 57.084 29.630 0.00 0.00 0.00 1.40
4295 5254 9.338622 CAAATATTTAGGAACGGAAGGAGTATT 57.661 33.333 0.00 0.00 0.00 1.89
4296 5255 8.491958 ACAAATATTTAGGAACGGAAGGAGTAT 58.508 33.333 0.00 0.00 0.00 2.12
4297 5256 7.854337 ACAAATATTTAGGAACGGAAGGAGTA 58.146 34.615 0.00 0.00 0.00 2.59
4298 5257 6.718294 ACAAATATTTAGGAACGGAAGGAGT 58.282 36.000 0.00 0.00 0.00 3.85
4299 5258 7.048512 AGACAAATATTTAGGAACGGAAGGAG 58.951 38.462 0.00 0.00 0.00 3.69
4300 5259 6.954232 AGACAAATATTTAGGAACGGAAGGA 58.046 36.000 0.00 0.00 0.00 3.36
4301 5260 7.625828 AAGACAAATATTTAGGAACGGAAGG 57.374 36.000 0.00 0.00 0.00 3.46
4302 5261 8.947115 AGAAAGACAAATATTTAGGAACGGAAG 58.053 33.333 0.00 0.00 0.00 3.46
4303 5262 8.857694 AGAAAGACAAATATTTAGGAACGGAA 57.142 30.769 0.00 0.00 0.00 4.30
4304 5263 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
4305 5264 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
4339 5298 9.950680 CATTTTTCTTTGTATGTAGTCACTTGT 57.049 29.630 0.00 0.00 0.00 3.16
4342 5301 9.561069 ACTCATTTTTCTTTGTATGTAGTCACT 57.439 29.630 0.00 0.00 0.00 3.41
4343 5302 9.599322 CACTCATTTTTCTTTGTATGTAGTCAC 57.401 33.333 0.00 0.00 0.00 3.67
4344 5303 9.554395 TCACTCATTTTTCTTTGTATGTAGTCA 57.446 29.630 0.00 0.00 0.00 3.41
4352 5311 8.227791 GCGTAGATTCACTCATTTTTCTTTGTA 58.772 33.333 0.00 0.00 0.00 2.41
4353 5312 7.041098 AGCGTAGATTCACTCATTTTTCTTTGT 60.041 33.333 0.00 0.00 0.00 2.83
4354 5313 7.301054 AGCGTAGATTCACTCATTTTTCTTTG 58.699 34.615 0.00 0.00 0.00 2.77
4355 5314 7.389053 AGAGCGTAGATTCACTCATTTTTCTTT 59.611 33.333 0.00 0.00 0.00 2.52
4356 5315 6.876257 AGAGCGTAGATTCACTCATTTTTCTT 59.124 34.615 0.00 0.00 0.00 2.52
4357 5316 6.402222 AGAGCGTAGATTCACTCATTTTTCT 58.598 36.000 0.00 0.00 0.00 2.52
4358 5317 6.654793 AGAGCGTAGATTCACTCATTTTTC 57.345 37.500 0.00 0.00 0.00 2.29
4359 5318 8.547967 TTTAGAGCGTAGATTCACTCATTTTT 57.452 30.769 0.00 0.00 0.00 1.94
4360 5319 8.547967 TTTTAGAGCGTAGATTCACTCATTTT 57.452 30.769 0.00 0.00 0.00 1.82
4361 5320 8.723942 ATTTTAGAGCGTAGATTCACTCATTT 57.276 30.769 0.00 0.00 0.00 2.32
4362 5321 9.988815 ATATTTTAGAGCGTAGATTCACTCATT 57.011 29.630 0.00 0.00 0.00 2.57
4389 5348 9.298250 GGATACCACATACGGATGTATATAGAT 57.702 37.037 14.23 1.36 44.82 1.98
4390 5349 8.276477 TGGATACCACATACGGATGTATATAGA 58.724 37.037 14.23 2.43 44.82 1.98
4391 5350 8.459911 TGGATACCACATACGGATGTATATAG 57.540 38.462 14.23 0.00 44.82 1.31
4392 5351 9.429109 AATGGATACCACATACGGATGTATATA 57.571 33.333 14.23 6.61 44.82 0.86
4393 5352 7.914427 ATGGATACCACATACGGATGTATAT 57.086 36.000 14.23 14.04 44.82 0.86
4394 5353 7.727578 AATGGATACCACATACGGATGTATA 57.272 36.000 14.23 9.59 44.82 1.47
4395 5354 6.620877 AATGGATACCACATACGGATGTAT 57.379 37.500 14.23 7.46 44.82 2.29
4396 5355 6.042208 TCAAATGGATACCACATACGGATGTA 59.958 38.462 14.23 0.00 44.82 2.29
4398 5357 5.304778 TCAAATGGATACCACATACGGATG 58.695 41.667 5.94 5.94 35.80 3.51
4399 5358 5.560722 TCAAATGGATACCACATACGGAT 57.439 39.130 0.00 0.00 35.80 4.18
4400 5359 5.360649 TTCAAATGGATACCACATACGGA 57.639 39.130 0.00 0.00 35.80 4.69
4401 5360 6.486657 AGATTTCAAATGGATACCACATACGG 59.513 38.462 0.00 0.00 35.80 4.02
4402 5361 7.496529 AGATTTCAAATGGATACCACATACG 57.503 36.000 0.00 0.00 35.80 3.06
4405 5364 9.699410 TCTAAAGATTTCAAATGGATACCACAT 57.301 29.630 0.00 0.00 35.80 3.21
4406 5365 9.527157 TTCTAAAGATTTCAAATGGATACCACA 57.473 29.630 0.00 0.00 35.80 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.