Multiple sequence alignment - TraesCS4A01G195000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G195000 chr4A 100.000 6441 0 0 1 6441 477023828 477030268 0.000000e+00 11895.0
1 TraesCS4A01G195000 chr4A 87.352 1771 177 22 2103 3843 163213996 163215749 0.000000e+00 1986.0
2 TraesCS4A01G195000 chr4A 90.710 1141 85 6 2734 3854 89692981 89694120 0.000000e+00 1500.0
3 TraesCS4A01G195000 chr4A 88.804 652 56 11 2102 2742 89683620 89684265 0.000000e+00 784.0
4 TraesCS4A01G195000 chr4A 93.824 340 20 1 3850 4189 89694158 89694496 1.600000e-140 510.0
5 TraesCS4A01G195000 chr4A 91.545 343 28 1 3849 4191 163215802 163216143 7.560000e-129 472.0
6 TraesCS4A01G195000 chr4A 89.860 286 21 3 2102 2380 60355409 60355693 1.710000e-95 361.0
7 TraesCS4A01G195000 chr4A 96.296 189 7 0 5404 5592 703680950 703681138 1.740000e-80 311.0
8 TraesCS4A01G195000 chr4A 93.750 80 5 0 4755 4834 574179268 574179189 3.150000e-23 121.0
9 TraesCS4A01G195000 chr5A 95.345 1783 48 8 2099 3854 621006287 621008061 0.000000e+00 2800.0
10 TraesCS4A01G195000 chr5A 89.081 1795 151 23 2097 3854 648907228 648909014 0.000000e+00 2187.0
11 TraesCS4A01G195000 chr5A 84.687 1404 171 22 2098 3470 35636962 35638352 0.000000e+00 1362.0
12 TraesCS4A01G195000 chr5A 82.559 969 160 9 2882 3847 700886984 700887946 0.000000e+00 845.0
13 TraesCS4A01G195000 chr5A 88.685 654 57 12 2101 2742 599774211 599774859 0.000000e+00 782.0
14 TraesCS4A01G195000 chr5A 94.428 341 19 0 3849 4189 648909056 648909396 5.720000e-145 525.0
15 TraesCS4A01G195000 chr5A 98.016 252 5 0 3938 4189 621008370 621008621 7.670000e-119 438.0
16 TraesCS4A01G195000 chr5A 83.776 339 55 0 3849 4187 700887990 700888328 8.060000e-84 322.0
17 TraesCS4A01G195000 chr5A 91.765 85 6 1 4755 4838 46248963 46248879 4.080000e-22 117.0
18 TraesCS4A01G195000 chr5A 100.000 43 0 0 3871 3913 621008329 621008371 5.350000e-11 80.5
19 TraesCS4A01G195000 chr7A 94.983 1754 56 8 2101 3827 149310565 149312313 0.000000e+00 2723.0
20 TraesCS4A01G195000 chr7A 98.462 195 3 0 3892 4086 149312634 149312828 1.720000e-90 344.0
21 TraesCS4A01G195000 chr7A 96.809 188 6 0 5404 5591 401426936 401426749 1.350000e-81 315.0
22 TraesCS4A01G195000 chr5D 86.678 1779 190 23 2105 3854 311903252 311901492 0.000000e+00 1929.0
23 TraesCS4A01G195000 chr5D 88.791 339 38 0 3849 4187 311901449 311901111 3.590000e-112 416.0
24 TraesCS4A01G195000 chr1D 90.020 1483 106 12 525 1994 207654728 207656181 0.000000e+00 1881.0
25 TraesCS4A01G195000 chr1D 86.139 1782 196 28 2101 3847 408848190 408846425 0.000000e+00 1875.0
26 TraesCS4A01G195000 chr1D 86.778 779 77 14 5579 6339 207657481 207658251 0.000000e+00 845.0
27 TraesCS4A01G195000 chr1D 89.043 575 36 11 4833 5405 207656958 207657507 0.000000e+00 688.0
28 TraesCS4A01G195000 chr1D 86.299 489 45 13 4218 4701 207656333 207656804 4.450000e-141 512.0
29 TraesCS4A01G195000 chr1D 90.323 341 33 0 3847 4187 408846383 408846043 1.270000e-121 448.0
30 TraesCS4A01G195000 chr1D 94.444 54 3 0 6374 6427 207658430 207658483 4.140000e-12 84.2
31 TraesCS4A01G195000 chr4D 94.991 1138 49 4 525 1661 98941420 98940290 0.000000e+00 1779.0
32 TraesCS4A01G195000 chr4D 90.829 567 39 7 4847 5405 98937630 98937069 0.000000e+00 747.0
33 TraesCS4A01G195000 chr4D 90.196 459 36 6 5988 6441 98936642 98936188 2.000000e-164 590.0
34 TraesCS4A01G195000 chr4D 92.623 366 10 4 1642 1998 98939159 98938802 1.600000e-140 510.0
35 TraesCS4A01G195000 chr4D 96.587 293 8 2 5590 5880 98937083 98936791 9.710000e-133 484.0
36 TraesCS4A01G195000 chr4D 95.470 287 10 3 4190 4474 98938675 98938390 7.610000e-124 455.0
37 TraesCS4A01G195000 chr4D 92.511 227 14 2 4475 4701 98938023 98937800 8.060000e-84 322.0
38 TraesCS4A01G195000 chr4D 90.521 211 10 4 319 519 98942925 98942715 2.960000e-68 270.0
39 TraesCS4A01G195000 chr4D 86.207 203 28 0 3849 4051 348704529 348704731 3.020000e-53 220.0
40 TraesCS4A01G195000 chr4D 89.256 121 4 2 1990 2101 98938780 98938660 6.730000e-30 143.0
41 TraesCS4A01G195000 chr4D 90.909 99 5 1 125 223 98943163 98943069 5.240000e-26 130.0
42 TraesCS4A01G195000 chr4B 95.815 669 22 3 5590 6252 140894556 140893888 0.000000e+00 1075.0
43 TraesCS4A01G195000 chr4B 95.361 582 21 4 1092 1672 140895462 140894886 0.000000e+00 920.0
44 TraesCS4A01G195000 chr4B 92.295 584 31 7 525 1103 140896063 140895489 0.000000e+00 817.0
45 TraesCS4A01G195000 chr4B 90.423 355 19 6 5055 5405 140894885 140894542 2.740000e-123 453.0
46 TraesCS4A01G195000 chr4B 94.146 205 8 2 319 519 140917807 140917603 6.270000e-80 309.0
47 TraesCS4A01G195000 chr7B 96.809 188 6 0 5404 5591 495719441 495719628 1.350000e-81 315.0
48 TraesCS4A01G195000 chr7B 93.750 80 5 0 4755 4834 680901017 680900938 3.150000e-23 121.0
49 TraesCS4A01G195000 chr7B 91.566 83 7 0 4752 4834 711427504 711427586 1.470000e-21 115.0
50 TraesCS4A01G195000 chr2D 96.335 191 5 2 5404 5593 620682233 620682044 4.850000e-81 313.0
51 TraesCS4A01G195000 chr6B 96.296 189 7 0 5404 5592 710077346 710077158 1.740000e-80 311.0
52 TraesCS4A01G195000 chr5B 96.296 189 7 0 5404 5592 421841362 421841174 1.740000e-80 311.0
53 TraesCS4A01G195000 chr5B 93.750 80 5 0 4755 4834 515195516 515195437 3.150000e-23 121.0
54 TraesCS4A01G195000 chrUn 96.296 189 5 2 5404 5591 91667965 91668152 6.270000e-80 309.0
55 TraesCS4A01G195000 chr6D 96.296 189 5 2 5404 5591 308886316 308886129 6.270000e-80 309.0
56 TraesCS4A01G195000 chr7D 95.337 193 7 2 5404 5595 169442132 169441941 8.110000e-79 305.0
57 TraesCS4A01G195000 chr2A 92.771 83 6 0 4752 4834 98885551 98885633 3.150000e-23 121.0
58 TraesCS4A01G195000 chr1A 93.750 80 5 0 4755 4834 26936543 26936464 3.150000e-23 121.0
59 TraesCS4A01G195000 chr1A 92.500 80 6 0 4755 4834 20438345 20438266 1.470000e-21 115.0
60 TraesCS4A01G195000 chr3B 92.500 80 6 0 4755 4834 437811639 437811560 1.470000e-21 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G195000 chr4A 477023828 477030268 6440 False 11895.000000 11895 100.0000 1 6441 1 chr4A.!!$F3 6440
1 TraesCS4A01G195000 chr4A 163213996 163216143 2147 False 1229.000000 1986 89.4485 2103 4191 2 chr4A.!!$F6 2088
2 TraesCS4A01G195000 chr4A 89692981 89694496 1515 False 1005.000000 1500 92.2670 2734 4189 2 chr4A.!!$F5 1455
3 TraesCS4A01G195000 chr4A 89683620 89684265 645 False 784.000000 784 88.8040 2102 2742 1 chr4A.!!$F2 640
4 TraesCS4A01G195000 chr5A 35636962 35638352 1390 False 1362.000000 1362 84.6870 2098 3470 1 chr5A.!!$F1 1372
5 TraesCS4A01G195000 chr5A 648907228 648909396 2168 False 1356.000000 2187 91.7545 2097 4189 2 chr5A.!!$F4 2092
6 TraesCS4A01G195000 chr5A 621006287 621008621 2334 False 1106.166667 2800 97.7870 2099 4189 3 chr5A.!!$F3 2090
7 TraesCS4A01G195000 chr5A 599774211 599774859 648 False 782.000000 782 88.6850 2101 2742 1 chr5A.!!$F2 641
8 TraesCS4A01G195000 chr5A 700886984 700888328 1344 False 583.500000 845 83.1675 2882 4187 2 chr5A.!!$F5 1305
9 TraesCS4A01G195000 chr7A 149310565 149312828 2263 False 1533.500000 2723 96.7225 2101 4086 2 chr7A.!!$F1 1985
10 TraesCS4A01G195000 chr5D 311901111 311903252 2141 True 1172.500000 1929 87.7345 2105 4187 2 chr5D.!!$R1 2082
11 TraesCS4A01G195000 chr1D 408846043 408848190 2147 True 1161.500000 1875 88.2310 2101 4187 2 chr1D.!!$R1 2086
12 TraesCS4A01G195000 chr1D 207654728 207658483 3755 False 802.040000 1881 89.3168 525 6427 5 chr1D.!!$F1 5902
13 TraesCS4A01G195000 chr4D 98936188 98943163 6975 True 543.000000 1779 92.3893 125 6441 10 chr4D.!!$R1 6316
14 TraesCS4A01G195000 chr4B 140893888 140896063 2175 True 816.250000 1075 93.4735 525 6252 4 chr4B.!!$R2 5727

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
71 72 0.038599 TGATGATGTGGCAGCACCTT 59.961 50.0 0.00 0.00 40.22 3.50 F
292 357 0.041386 AGTACCTGACCCTCCTCACC 59.959 60.0 0.00 0.00 0.00 4.02 F
595 1963 0.105658 ATAGGCCGGCTCTGGAGTTA 60.106 55.0 28.56 5.85 0.00 2.24 F
2018 4618 0.464036 TTCGTTGTCTGTGCACTCCT 59.536 50.0 19.41 0.00 0.00 3.69 F
2329 4947 0.029834 CCGCACCAAAGCATCATAGC 59.970 55.0 0.00 0.00 0.00 2.97 F
2710 5343 0.251742 TGAAGCACCATTCCCCTTGG 60.252 55.0 0.00 0.00 40.26 3.61 F
3134 5788 0.982704 AGCTCAGGTCTGCATTCAGT 59.017 50.0 0.00 0.00 41.10 3.41 F
3588 6244 0.041238 TACCTCTCCCTCCACACCAG 59.959 60.0 0.00 0.00 0.00 4.00 F
4844 8130 0.100861 CGTCCCCGTCTTCTTAGCTC 59.899 60.0 0.00 0.00 0.00 4.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1704 4272 1.144057 CATCTAGGCGGGCGAACTT 59.856 57.895 0.00 0.0 0.00 2.66 R
2018 4618 1.611491 GGCACCAAAGGAATCGTTTCA 59.389 47.619 8.41 0.0 33.23 2.69 R
2234 4845 1.670083 GCCTCGTAGTGGGCGTTTT 60.670 57.895 0.00 0.0 42.22 2.43 R
3414 6068 0.322456 GGCTGTGGCAAGATGTGGTA 60.322 55.000 0.00 0.0 40.87 3.25 R
3504 6158 1.230212 GAATAAGGGTGGGCTGGGG 59.770 63.158 0.00 0.0 0.00 4.96 R
3573 6229 1.814429 TTTTCTGGTGTGGAGGGAGA 58.186 50.000 0.00 0.0 0.00 3.71 R
4783 8069 0.401738 ACTGCCATTCGGGGATATGG 59.598 55.000 0.00 0.0 43.40 2.74 R
5437 8759 0.038526 GACCACACACACCGGACTAG 60.039 60.000 9.46 0.0 0.00 2.57 R
5978 9391 1.333308 CAAACATGGTCTCGTGCACAA 59.667 47.619 18.64 0.0 33.32 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 9.640952 TTTAGGGGAAGAAAGGATTATTATGTG 57.359 33.333 0.00 0.00 0.00 3.21
54 55 7.465900 AGGGGAAGAAAGGATTATTATGTGA 57.534 36.000 0.00 0.00 0.00 3.58
55 56 8.061890 AGGGGAAGAAAGGATTATTATGTGAT 57.938 34.615 0.00 0.00 0.00 3.06
56 57 7.946776 AGGGGAAGAAAGGATTATTATGTGATG 59.053 37.037 0.00 0.00 0.00 3.07
57 58 7.944554 GGGGAAGAAAGGATTATTATGTGATGA 59.055 37.037 0.00 0.00 0.00 2.92
58 59 9.525826 GGGAAGAAAGGATTATTATGTGATGAT 57.474 33.333 0.00 0.00 0.00 2.45
62 63 9.293404 AGAAAGGATTATTATGTGATGATGTGG 57.707 33.333 0.00 0.00 0.00 4.17
63 64 7.458409 AAGGATTATTATGTGATGATGTGGC 57.542 36.000 0.00 0.00 0.00 5.01
64 65 6.545567 AGGATTATTATGTGATGATGTGGCA 58.454 36.000 0.00 0.00 0.00 4.92
65 66 6.657966 AGGATTATTATGTGATGATGTGGCAG 59.342 38.462 0.00 0.00 0.00 4.85
66 67 5.694231 TTATTATGTGATGATGTGGCAGC 57.306 39.130 0.00 0.00 0.00 5.25
67 68 2.713863 TATGTGATGATGTGGCAGCA 57.286 45.000 0.00 0.00 33.25 4.41
69 70 1.805254 GTGATGATGTGGCAGCACC 59.195 57.895 0.00 0.00 46.39 5.01
70 71 0.679002 GTGATGATGTGGCAGCACCT 60.679 55.000 0.00 0.00 46.39 4.00
71 72 0.038599 TGATGATGTGGCAGCACCTT 59.961 50.000 0.00 0.00 40.22 3.50
72 73 0.454600 GATGATGTGGCAGCACCTTG 59.545 55.000 0.00 0.00 40.22 3.61
73 74 0.968901 ATGATGTGGCAGCACCTTGG 60.969 55.000 0.00 0.00 40.22 3.61
74 75 1.604593 GATGTGGCAGCACCTTGGT 60.605 57.895 0.00 0.00 40.22 3.67
75 76 1.152483 ATGTGGCAGCACCTTGGTT 60.152 52.632 0.00 0.00 40.22 3.67
76 77 0.760189 ATGTGGCAGCACCTTGGTTT 60.760 50.000 0.00 0.00 40.22 3.27
77 78 0.975040 TGTGGCAGCACCTTGGTTTT 60.975 50.000 0.00 0.00 40.22 2.43
78 79 0.177836 GTGGCAGCACCTTGGTTTTT 59.822 50.000 0.00 0.00 40.22 1.94
79 80 0.463620 TGGCAGCACCTTGGTTTTTC 59.536 50.000 0.00 0.00 40.22 2.29
80 81 0.752658 GGCAGCACCTTGGTTTTTCT 59.247 50.000 0.00 0.00 34.51 2.52
81 82 1.138859 GGCAGCACCTTGGTTTTTCTT 59.861 47.619 0.00 0.00 34.51 2.52
82 83 2.419990 GGCAGCACCTTGGTTTTTCTTT 60.420 45.455 0.00 0.00 34.51 2.52
83 84 3.270027 GCAGCACCTTGGTTTTTCTTTT 58.730 40.909 0.00 0.00 0.00 2.27
84 85 3.689161 GCAGCACCTTGGTTTTTCTTTTT 59.311 39.130 0.00 0.00 0.00 1.94
85 86 4.201812 GCAGCACCTTGGTTTTTCTTTTTC 60.202 41.667 0.00 0.00 0.00 2.29
86 87 5.178061 CAGCACCTTGGTTTTTCTTTTTCT 58.822 37.500 0.00 0.00 0.00 2.52
87 88 5.643348 CAGCACCTTGGTTTTTCTTTTTCTT 59.357 36.000 0.00 0.00 0.00 2.52
88 89 6.149308 CAGCACCTTGGTTTTTCTTTTTCTTT 59.851 34.615 0.00 0.00 0.00 2.52
89 90 6.371548 AGCACCTTGGTTTTTCTTTTTCTTTC 59.628 34.615 0.00 0.00 0.00 2.62
90 91 6.371548 GCACCTTGGTTTTTCTTTTTCTTTCT 59.628 34.615 0.00 0.00 0.00 2.52
91 92 7.094805 GCACCTTGGTTTTTCTTTTTCTTTCTT 60.095 33.333 0.00 0.00 0.00 2.52
92 93 8.783093 CACCTTGGTTTTTCTTTTTCTTTCTTT 58.217 29.630 0.00 0.00 0.00 2.52
93 94 9.349713 ACCTTGGTTTTTCTTTTTCTTTCTTTT 57.650 25.926 0.00 0.00 0.00 2.27
94 95 9.611284 CCTTGGTTTTTCTTTTTCTTTCTTTTG 57.389 29.630 0.00 0.00 0.00 2.44
97 98 8.503196 TGGTTTTTCTTTTTCTTTCTTTTGAGC 58.497 29.630 0.00 0.00 0.00 4.26
98 99 8.503196 GGTTTTTCTTTTTCTTTCTTTTGAGCA 58.497 29.630 0.00 0.00 0.00 4.26
99 100 9.877137 GTTTTTCTTTTTCTTTCTTTTGAGCAA 57.123 25.926 0.00 0.00 0.00 3.91
104 105 9.218440 TCTTTTTCTTTCTTTTGAGCAAAATGT 57.782 25.926 8.65 0.00 39.29 2.71
105 106 9.269415 CTTTTTCTTTCTTTTGAGCAAAATGTG 57.731 29.630 8.65 0.00 39.29 3.21
106 107 6.907206 TTCTTTCTTTTGAGCAAAATGTGG 57.093 33.333 8.65 0.00 39.29 4.17
107 108 4.810491 TCTTTCTTTTGAGCAAAATGTGGC 59.190 37.500 8.65 0.00 39.29 5.01
108 109 2.741612 TCTTTTGAGCAAAATGTGGCG 58.258 42.857 8.65 0.00 39.29 5.69
109 110 1.794116 CTTTTGAGCAAAATGTGGCGG 59.206 47.619 8.65 0.00 39.29 6.13
110 111 0.599728 TTTGAGCAAAATGTGGCGGC 60.600 50.000 0.00 0.00 34.54 6.53
111 112 1.742324 TTGAGCAAAATGTGGCGGCA 61.742 50.000 7.97 7.97 34.54 5.69
112 113 1.734117 GAGCAAAATGTGGCGGCAC 60.734 57.895 33.07 33.07 34.54 5.01
113 114 2.738139 GCAAAATGTGGCGGCACC 60.738 61.111 35.54 19.93 39.84 5.01
114 115 3.050339 CAAAATGTGGCGGCACCT 58.950 55.556 35.54 25.52 40.22 4.00
115 116 1.367102 CAAAATGTGGCGGCACCTT 59.633 52.632 35.54 29.40 40.22 3.50
116 117 0.945265 CAAAATGTGGCGGCACCTTG 60.945 55.000 35.54 28.95 40.22 3.61
117 118 2.098426 AAAATGTGGCGGCACCTTGG 62.098 55.000 35.54 0.00 40.22 3.61
118 119 3.808218 AATGTGGCGGCACCTTGGT 62.808 57.895 35.54 15.59 40.22 3.67
121 122 4.947147 TGGCGGCACCTTGGTGTC 62.947 66.667 19.47 16.81 40.22 3.67
122 123 4.643387 GGCGGCACCTTGGTGTCT 62.643 66.667 20.24 0.00 34.51 3.41
123 124 3.357079 GCGGCACCTTGGTGTCTG 61.357 66.667 20.24 16.93 0.00 3.51
129 130 2.338620 CCTTGGTGTCTGACGCGA 59.661 61.111 15.93 8.57 0.00 5.87
135 136 1.795177 GTGTCTGACGCGACGGTAC 60.795 63.158 15.93 12.11 36.71 3.34
148 149 1.377229 CGGTACTTTTGGGCCAGGA 59.623 57.895 6.23 0.00 0.00 3.86
157 158 7.070696 GGTACTTTTGGGCCAGGAATATTTATT 59.929 37.037 6.23 0.00 0.00 1.40
158 159 7.509236 ACTTTTGGGCCAGGAATATTTATTT 57.491 32.000 6.23 0.00 0.00 1.40
159 160 8.616799 ACTTTTGGGCCAGGAATATTTATTTA 57.383 30.769 6.23 0.00 0.00 1.40
160 161 8.482943 ACTTTTGGGCCAGGAATATTTATTTAC 58.517 33.333 6.23 0.00 0.00 2.01
211 212 4.261994 CCATCCTTAATAAAATGGGCCACG 60.262 45.833 9.28 0.00 35.95 4.94
212 213 2.691011 TCCTTAATAAAATGGGCCACGC 59.309 45.455 9.28 0.00 0.00 5.34
224 243 2.119029 GCCACGCCATTTAGGTCCC 61.119 63.158 0.00 0.00 40.61 4.46
227 246 1.094785 CACGCCATTTAGGTCCCAAG 58.905 55.000 0.00 0.00 40.61 3.61
229 248 1.339727 ACGCCATTTAGGTCCCAAGTC 60.340 52.381 0.00 0.00 40.61 3.01
233 252 0.107848 ATTTAGGTCCCAAGTCGCCG 60.108 55.000 0.00 0.00 0.00 6.46
234 253 2.175035 TTTAGGTCCCAAGTCGCCGG 62.175 60.000 0.00 0.00 0.00 6.13
237 256 2.281276 GTCCCAAGTCGCCGGTTT 60.281 61.111 1.90 0.00 0.00 3.27
238 257 2.031465 TCCCAAGTCGCCGGTTTC 59.969 61.111 1.90 0.00 0.00 2.78
239 258 3.053896 CCCAAGTCGCCGGTTTCC 61.054 66.667 1.90 0.00 0.00 3.13
242 261 1.574702 CCAAGTCGCCGGTTTCCTTC 61.575 60.000 1.90 0.00 0.00 3.46
253 272 4.262036 GCCGGTTTCCTTCTTCTCAAAAAT 60.262 41.667 1.90 0.00 0.00 1.82
262 327 7.162082 TCCTTCTTCTCAAAAATAGACTCCAC 58.838 38.462 0.00 0.00 0.00 4.02
264 329 6.433847 TCTTCTCAAAAATAGACTCCACCA 57.566 37.500 0.00 0.00 0.00 4.17
267 332 4.010349 CTCAAAAATAGACTCCACCACCC 58.990 47.826 0.00 0.00 0.00 4.61
279 344 1.354368 CCACCACCCAAATCAGTACCT 59.646 52.381 0.00 0.00 0.00 3.08
280 345 2.436417 CACCACCCAAATCAGTACCTG 58.564 52.381 0.00 0.00 0.00 4.00
285 350 1.916181 CCCAAATCAGTACCTGACCCT 59.084 52.381 0.00 0.00 43.63 4.34
286 351 2.092914 CCCAAATCAGTACCTGACCCTC 60.093 54.545 0.00 0.00 43.63 4.30
287 352 2.092914 CCAAATCAGTACCTGACCCTCC 60.093 54.545 0.00 0.00 43.63 4.30
290 355 1.081481 TCAGTACCTGACCCTCCTCA 58.919 55.000 0.00 0.00 35.39 3.86
291 356 1.187087 CAGTACCTGACCCTCCTCAC 58.813 60.000 0.00 0.00 32.44 3.51
292 357 0.041386 AGTACCTGACCCTCCTCACC 59.959 60.000 0.00 0.00 0.00 4.02
294 359 1.503401 TACCTGACCCTCCTCACCGA 61.503 60.000 0.00 0.00 0.00 4.69
296 361 0.106167 CCTGACCCTCCTCACCGATA 60.106 60.000 0.00 0.00 0.00 2.92
297 362 1.033574 CTGACCCTCCTCACCGATAC 58.966 60.000 0.00 0.00 0.00 2.24
298 363 0.629596 TGACCCTCCTCACCGATACT 59.370 55.000 0.00 0.00 0.00 2.12
299 364 1.033574 GACCCTCCTCACCGATACTG 58.966 60.000 0.00 0.00 0.00 2.74
300 365 1.043673 ACCCTCCTCACCGATACTGC 61.044 60.000 0.00 0.00 0.00 4.40
301 366 1.043116 CCCTCCTCACCGATACTGCA 61.043 60.000 0.00 0.00 0.00 4.41
302 367 0.387202 CCTCCTCACCGATACTGCAG 59.613 60.000 13.48 13.48 0.00 4.41
303 368 1.393603 CTCCTCACCGATACTGCAGA 58.606 55.000 23.35 4.31 0.00 4.26
304 369 1.959985 CTCCTCACCGATACTGCAGAT 59.040 52.381 23.35 9.62 0.00 2.90
305 370 2.363680 CTCCTCACCGATACTGCAGATT 59.636 50.000 23.35 6.81 0.00 2.40
306 371 3.562182 TCCTCACCGATACTGCAGATTA 58.438 45.455 23.35 3.14 0.00 1.75
307 372 3.958147 TCCTCACCGATACTGCAGATTAA 59.042 43.478 23.35 2.81 0.00 1.40
308 373 4.588951 TCCTCACCGATACTGCAGATTAAT 59.411 41.667 23.35 8.01 0.00 1.40
309 374 4.926238 CCTCACCGATACTGCAGATTAATC 59.074 45.833 23.35 15.30 0.00 1.75
310 375 5.279206 CCTCACCGATACTGCAGATTAATCT 60.279 44.000 23.35 12.37 37.72 2.40
413 488 2.434359 GCACCTGCACCGTCTACC 60.434 66.667 0.00 0.00 41.59 3.18
464 539 0.878961 GGCTGTTCGTCCTTGTCGTT 60.879 55.000 0.00 0.00 0.00 3.85
479 554 2.661566 CGTTCCAGACAGCACAGCG 61.662 63.158 0.00 0.00 0.00 5.18
503 578 5.099042 GGTACAACCTGTCTGTCCATTAT 57.901 43.478 0.00 0.00 34.73 1.28
519 594 4.067192 CCATTATGCGATCCATCTGAACA 58.933 43.478 0.59 0.00 35.34 3.18
520 595 4.698780 CCATTATGCGATCCATCTGAACAT 59.301 41.667 0.59 0.00 35.34 2.71
521 596 5.391629 CCATTATGCGATCCATCTGAACATG 60.392 44.000 0.00 0.00 35.34 3.21
522 597 2.985957 TGCGATCCATCTGAACATGA 57.014 45.000 0.00 0.00 0.00 3.07
523 598 3.264998 TGCGATCCATCTGAACATGAA 57.735 42.857 0.00 0.00 0.00 2.57
587 1954 0.605860 TCGTCTCTATAGGCCGGCTC 60.606 60.000 28.56 16.85 0.00 4.70
595 1963 0.105658 ATAGGCCGGCTCTGGAGTTA 60.106 55.000 28.56 5.85 0.00 2.24
696 2064 6.579666 ATGTTCAATGTAGTCATTTGTGCT 57.420 33.333 0.00 0.00 41.66 4.40
859 2227 7.523293 TTTCATACAGTCCAAACATTCATGT 57.477 32.000 0.00 0.00 44.20 3.21
874 2242 1.070601 TCATGTATGGTCATGCCGAGG 59.929 52.381 0.00 0.00 43.18 4.63
954 2322 7.148407 GCGGATGAATACCATGGATTAAGTTAG 60.148 40.741 21.47 4.45 35.17 2.34
1087 2455 2.741122 TGATGTTTTTCGCGTTCGTT 57.259 40.000 5.77 0.00 36.96 3.85
1169 2575 1.066858 CAGGCAGGACGAGCTTCTTAA 60.067 52.381 0.00 0.00 0.00 1.85
1189 2595 3.763557 ATGACCCCAATCTCACCAAAT 57.236 42.857 0.00 0.00 0.00 2.32
1242 2648 1.406898 CTCTCTGCGACTTCCTATGCA 59.593 52.381 0.00 0.00 35.75 3.96
1270 2676 4.654262 TCTTCCACAAGGTACATATCTCCC 59.346 45.833 0.00 0.00 35.89 4.30
1496 2905 1.200519 TGGTGTTCGCTAGGGCTATT 58.799 50.000 1.02 0.00 36.09 1.73
1530 2939 4.550422 GAGTGGTTTCAGAAAAATGCTCC 58.450 43.478 0.00 0.00 0.00 4.70
1628 3037 5.987953 ACAGCTGTATTATCACATAGTGCAG 59.012 40.000 20.16 1.38 37.92 4.41
1657 3066 5.755330 GTTTTGAAAAACAAGAAGCGTGA 57.245 34.783 12.61 0.00 45.72 4.35
1661 3070 5.499139 TGAAAAACAAGAAGCGTGAAGAT 57.501 34.783 0.00 0.00 0.00 2.40
1662 3071 5.273170 TGAAAAACAAGAAGCGTGAAGATG 58.727 37.500 0.00 0.00 0.00 2.90
1704 4272 9.896645 AAGTTCAGCTTTTCTATGATCTTATCA 57.103 29.630 0.00 0.00 37.70 2.15
1790 4358 3.067106 CGTATAATCAGCCCGCTTTGAT 58.933 45.455 0.00 0.00 35.63 2.57
1791 4359 3.498397 CGTATAATCAGCCCGCTTTGATT 59.502 43.478 8.62 8.62 44.05 2.57
1792 4360 4.024048 CGTATAATCAGCCCGCTTTGATTT 60.024 41.667 8.82 2.54 42.37 2.17
1793 4361 5.505654 CGTATAATCAGCCCGCTTTGATTTT 60.506 40.000 8.82 5.22 42.37 1.82
1794 4362 3.683365 AATCAGCCCGCTTTGATTTTT 57.317 38.095 0.00 0.00 40.19 1.94
1795 4363 4.799564 AATCAGCCCGCTTTGATTTTTA 57.200 36.364 0.00 0.00 40.19 1.52
1796 4364 5.343307 AATCAGCCCGCTTTGATTTTTAT 57.657 34.783 0.00 0.00 40.19 1.40
1797 4365 4.799564 TCAGCCCGCTTTGATTTTTATT 57.200 36.364 0.00 0.00 0.00 1.40
1961 4532 4.956075 AGGGGCTAATAACCATTTGTCAAG 59.044 41.667 0.00 0.00 0.00 3.02
2018 4618 0.464036 TTCGTTGTCTGTGCACTCCT 59.536 50.000 19.41 0.00 0.00 3.69
2124 4733 0.996583 TTTTGACCCGGGCTAATCCT 59.003 50.000 24.08 0.00 34.39 3.24
2234 4845 2.048316 TGTGAGCGCTCGCAATCA 60.048 55.556 42.48 25.02 45.85 2.57
2277 4895 3.049674 CACCATCAACACGCCGCT 61.050 61.111 0.00 0.00 0.00 5.52
2294 4912 3.501062 GCCGCTAACCAAACTAAAGTTCT 59.499 43.478 0.00 0.00 37.25 3.01
2329 4947 0.029834 CCGCACCAAAGCATCATAGC 59.970 55.000 0.00 0.00 0.00 2.97
2398 5020 2.202932 GCGTCTCGACCCATGCAT 60.203 61.111 0.00 0.00 0.00 3.96
2710 5343 0.251742 TGAAGCACCATTCCCCTTGG 60.252 55.000 0.00 0.00 40.26 3.61
2852 5485 7.665559 ACAGATGTAAATAGGTTTCTCTGCAAA 59.334 33.333 0.00 0.00 34.80 3.68
2961 5615 4.571951 AGGTAATCTAGCCCTCCAAATCT 58.428 43.478 0.00 0.00 0.00 2.40
3073 5727 1.686325 TTATCTGGACCAGCCGAGGC 61.686 60.000 17.33 5.89 40.66 4.70
3134 5788 0.982704 AGCTCAGGTCTGCATTCAGT 59.017 50.000 0.00 0.00 41.10 3.41
3163 5817 6.318628 GTCTGAATATATCTCCACTAGCACG 58.681 44.000 0.00 0.00 0.00 5.34
3414 6068 6.987403 TTGTTCTTAAGGTATTTTGCCCTT 57.013 33.333 1.85 0.00 43.41 3.95
3438 6092 1.927527 ATCTTGCCACAGCCCCTCT 60.928 57.895 0.00 0.00 38.69 3.69
3504 6158 6.377327 TTCTGTTTGTGAAGATCTTTCACC 57.623 37.500 23.52 14.77 46.01 4.02
3573 6229 7.933215 AACCAGATAATAACGCTTTTTACCT 57.067 32.000 0.00 0.00 0.00 3.08
3588 6244 0.041238 TACCTCTCCCTCCACACCAG 59.959 60.000 0.00 0.00 0.00 4.00
4136 7052 1.121378 GCCTCACCCCCTTACTACTC 58.879 60.000 0.00 0.00 0.00 2.59
4197 7114 9.113838 CACTAATAGTGCCATTTCATTTAGAGT 57.886 33.333 7.55 0.00 39.62 3.24
4260 7177 6.357367 AGTTAGTGATATGGCAAAACCTAGG 58.643 40.000 7.41 7.41 40.22 3.02
4265 7182 0.897621 ATGGCAAAACCTAGGCTTGC 59.102 50.000 28.99 28.99 43.75 4.01
4266 7183 0.178964 TGGCAAAACCTAGGCTTGCT 60.179 50.000 32.43 6.27 43.91 3.91
4397 7316 5.565509 TGGTCAGATGCAAAGTGGTTATAA 58.434 37.500 0.00 0.00 0.00 0.98
4398 7317 5.647658 TGGTCAGATGCAAAGTGGTTATAAG 59.352 40.000 0.00 0.00 0.00 1.73
4409 7330 8.182227 GCAAAGTGGTTATAAGTTAACCTGATC 58.818 37.037 13.93 0.00 45.38 2.92
4589 7875 4.022849 GCCTGTGACAAATTTACTGAGCTT 60.023 41.667 0.00 0.00 0.00 3.74
4591 7877 6.293955 GCCTGTGACAAATTTACTGAGCTTTA 60.294 38.462 0.00 0.00 0.00 1.85
4592 7878 7.301054 CCTGTGACAAATTTACTGAGCTTTAG 58.699 38.462 0.00 0.00 0.00 1.85
4627 7913 5.048782 TCAAATTTCTGGCACTATGACACAC 60.049 40.000 0.00 0.00 28.59 3.82
4631 7917 2.232208 TCTGGCACTATGACACACAGAG 59.768 50.000 0.00 0.00 42.73 3.35
4632 7918 1.276138 TGGCACTATGACACACAGAGG 59.724 52.381 0.00 0.00 41.54 3.69
4637 7923 4.108336 CACTATGACACACAGAGGAATCG 58.892 47.826 0.00 0.00 41.54 3.34
4701 7987 1.199789 TCATTCAATTCGCACCAGCAC 59.800 47.619 0.00 0.00 42.27 4.40
4702 7988 0.527565 ATTCAATTCGCACCAGCACC 59.472 50.000 0.00 0.00 42.27 5.01
4703 7989 0.821301 TTCAATTCGCACCAGCACCA 60.821 50.000 0.00 0.00 42.27 4.17
4704 7990 1.210931 CAATTCGCACCAGCACCAG 59.789 57.895 0.00 0.00 42.27 4.00
4705 7991 2.629656 AATTCGCACCAGCACCAGC 61.630 57.895 0.00 0.00 42.27 4.85
4706 7992 3.848301 ATTCGCACCAGCACCAGCA 62.848 57.895 0.00 0.00 45.49 4.41
4707 7993 3.848301 TTCGCACCAGCACCAGCAT 62.848 57.895 0.00 0.00 45.49 3.79
4708 7994 3.367743 CGCACCAGCACCAGCATT 61.368 61.111 0.00 0.00 45.49 3.56
4709 7995 2.570181 GCACCAGCACCAGCATTC 59.430 61.111 0.00 0.00 45.49 2.67
4710 7996 2.270257 GCACCAGCACCAGCATTCA 61.270 57.895 0.00 0.00 45.49 2.57
4713 7999 0.892755 ACCAGCACCAGCATTCAATG 59.107 50.000 0.00 0.00 45.49 2.82
4715 8001 0.459585 CAGCACCAGCATTCAATGGC 60.460 55.000 0.00 0.00 45.49 4.40
4717 8003 0.248289 GCACCAGCATTCAATGGCTT 59.752 50.000 0.00 0.00 40.45 4.35
4719 8005 2.872842 GCACCAGCATTCAATGGCTTTT 60.873 45.455 0.00 0.00 40.45 2.27
4720 8006 3.404899 CACCAGCATTCAATGGCTTTTT 58.595 40.909 0.00 0.00 40.45 1.94
4725 8011 6.372381 ACCAGCATTCAATGGCTTTTTATTTC 59.628 34.615 0.00 0.00 40.45 2.17
4726 8012 6.596497 CCAGCATTCAATGGCTTTTTATTTCT 59.404 34.615 0.00 0.00 38.56 2.52
4727 8013 7.765360 CCAGCATTCAATGGCTTTTTATTTCTA 59.235 33.333 0.00 0.00 38.56 2.10
4728 8014 9.153721 CAGCATTCAATGGCTTTTTATTTCTAA 57.846 29.630 0.00 0.00 38.56 2.10
4784 8070 9.506018 TTTTTCTAAATACTTATATACCCCGCC 57.494 33.333 0.00 0.00 0.00 6.13
4785 8071 7.795534 TTCTAAATACTTATATACCCCGCCA 57.204 36.000 0.00 0.00 0.00 5.69
4786 8072 7.983166 TCTAAATACTTATATACCCCGCCAT 57.017 36.000 0.00 0.00 0.00 4.40
4788 8074 9.664777 TCTAAATACTTATATACCCCGCCATAT 57.335 33.333 0.00 0.00 0.00 1.78
4789 8075 9.924650 CTAAATACTTATATACCCCGCCATATC 57.075 37.037 0.00 0.00 0.00 1.63
4790 8076 6.930068 ATACTTATATACCCCGCCATATCC 57.070 41.667 0.00 0.00 0.00 2.59
4791 8077 3.971971 ACTTATATACCCCGCCATATCCC 59.028 47.826 0.00 0.00 0.00 3.85
4792 8078 1.815757 ATATACCCCGCCATATCCCC 58.184 55.000 0.00 0.00 0.00 4.81
4793 8079 0.688418 TATACCCCGCCATATCCCCG 60.688 60.000 0.00 0.00 0.00 5.73
4794 8080 2.465010 ATACCCCGCCATATCCCCGA 62.465 60.000 0.00 0.00 0.00 5.14
4796 8082 2.602676 CCCCGCCATATCCCCGAAT 61.603 63.158 0.00 0.00 0.00 3.34
4797 8083 1.377202 CCCGCCATATCCCCGAATG 60.377 63.158 0.00 0.00 0.00 2.67
4798 8084 1.377202 CCGCCATATCCCCGAATGG 60.377 63.158 0.00 0.00 44.64 3.16
4801 8087 3.254629 CCATATCCCCGAATGGCAG 57.745 57.895 0.00 0.00 36.50 4.85
4802 8088 0.401738 CCATATCCCCGAATGGCAGT 59.598 55.000 0.00 0.00 36.50 4.40
4804 8090 2.586425 CATATCCCCGAATGGCAGTTT 58.414 47.619 0.00 0.00 0.00 2.66
4805 8091 2.818751 TATCCCCGAATGGCAGTTTT 57.181 45.000 0.00 0.00 0.00 2.43
4824 8110 3.495670 TTTTGAAAATGCCGTATCCCG 57.504 42.857 0.00 0.00 0.00 5.14
4825 8111 0.736053 TTGAAAATGCCGTATCCCGC 59.264 50.000 0.00 0.00 34.38 6.13
4827 8113 1.433837 GAAAATGCCGTATCCCGCGT 61.434 55.000 4.92 0.00 34.38 6.01
4828 8114 1.433837 AAAATGCCGTATCCCGCGTC 61.434 55.000 4.92 0.00 34.38 5.19
4829 8115 3.802418 AATGCCGTATCCCGCGTCC 62.802 63.158 4.92 0.00 34.38 4.79
4834 8120 4.276146 GTATCCCGCGTCCCCGTC 62.276 72.222 4.92 0.00 36.15 4.79
4839 8125 4.065281 CCGCGTCCCCGTCTTCTT 62.065 66.667 4.92 0.00 36.15 2.52
4840 8126 2.703798 CCGCGTCCCCGTCTTCTTA 61.704 63.158 4.92 0.00 36.15 2.10
4841 8127 1.226603 CGCGTCCCCGTCTTCTTAG 60.227 63.158 0.00 0.00 36.15 2.18
4842 8128 1.518792 GCGTCCCCGTCTTCTTAGC 60.519 63.158 0.00 0.00 36.15 3.09
4843 8129 1.946475 GCGTCCCCGTCTTCTTAGCT 61.946 60.000 0.00 0.00 36.15 3.32
4844 8130 0.100861 CGTCCCCGTCTTCTTAGCTC 59.899 60.000 0.00 0.00 0.00 4.09
4891 8201 7.504924 AAAAAGCCAAATTTAAAGTTAGGGC 57.495 32.000 17.39 17.39 40.41 5.19
4935 8245 1.003464 GTGAGGGGCCAAAAATGCATT 59.997 47.619 5.99 5.99 0.00 3.56
4966 8276 4.630644 AACTTGAGCTTCCATTCTGAGA 57.369 40.909 0.00 0.00 0.00 3.27
4968 8278 4.978099 ACTTGAGCTTCCATTCTGAGAAA 58.022 39.130 0.00 0.00 0.00 2.52
4977 8288 8.713036 AGCTTCCATTCTGAGAAATAACTCTAT 58.287 33.333 0.00 0.00 37.73 1.98
5010 8321 3.184541 GCAAGCCTGCTAACATCAAATG 58.815 45.455 0.00 0.00 45.74 2.32
5052 8363 5.771469 TGAACGCACAATCTGAAATTCAAT 58.229 33.333 0.00 0.00 0.00 2.57
5223 8545 7.542025 AGAATGGTGCTTACAAAAAGATGATC 58.458 34.615 0.00 0.00 0.00 2.92
5287 8609 6.861065 TGAAGTCTCACAGTTACCATTTTC 57.139 37.500 0.00 0.00 0.00 2.29
5312 8634 7.344612 TCAAGTGATTAGGGTCTCTTAGCATTA 59.655 37.037 0.00 0.00 32.44 1.90
5399 8721 7.498239 TGCATTTTCTCAAGATGAAGATAGAGG 59.502 37.037 0.00 0.00 0.00 3.69
5405 8727 0.972883 GATGAAGATAGAGGCCGCCT 59.027 55.000 13.16 13.16 36.03 5.52
5406 8728 1.346068 GATGAAGATAGAGGCCGCCTT 59.654 52.381 14.70 6.37 31.76 4.35
5407 8729 0.465705 TGAAGATAGAGGCCGCCTTG 59.534 55.000 14.70 0.00 31.76 3.61
5408 8730 0.466124 GAAGATAGAGGCCGCCTTGT 59.534 55.000 14.70 6.93 31.76 3.16
5409 8731 1.687123 GAAGATAGAGGCCGCCTTGTA 59.313 52.381 14.70 9.09 31.76 2.41
5410 8732 2.016905 AGATAGAGGCCGCCTTGTAT 57.983 50.000 14.70 13.57 31.76 2.29
5411 8733 1.896465 AGATAGAGGCCGCCTTGTATC 59.104 52.381 23.52 23.52 31.76 2.24
5412 8734 1.896465 GATAGAGGCCGCCTTGTATCT 59.104 52.381 23.61 15.59 31.76 1.98
5413 8735 1.040646 TAGAGGCCGCCTTGTATCTG 58.959 55.000 14.70 0.00 31.76 2.90
5414 8736 1.227674 GAGGCCGCCTTGTATCTGG 60.228 63.158 14.70 0.00 31.76 3.86
5415 8737 2.902343 GGCCGCCTTGTATCTGGC 60.902 66.667 0.71 0.00 45.25 4.85
5416 8738 2.190578 GCCGCCTTGTATCTGGCT 59.809 61.111 0.00 0.00 46.42 4.75
5417 8739 1.889573 GCCGCCTTGTATCTGGCTC 60.890 63.158 0.00 0.00 46.42 4.70
5418 8740 1.592669 CCGCCTTGTATCTGGCTCG 60.593 63.158 0.00 0.00 46.42 5.03
5419 8741 1.592669 CGCCTTGTATCTGGCTCGG 60.593 63.158 0.00 0.00 46.42 4.63
5420 8742 1.823295 GCCTTGTATCTGGCTCGGA 59.177 57.895 0.00 0.00 45.26 4.55
5421 8743 0.530870 GCCTTGTATCTGGCTCGGAC 60.531 60.000 0.00 0.00 45.26 4.79
5422 8744 0.249073 CCTTGTATCTGGCTCGGACG 60.249 60.000 0.00 0.00 0.00 4.79
5423 8745 0.738975 CTTGTATCTGGCTCGGACGA 59.261 55.000 0.00 0.00 0.00 4.20
5424 8746 0.454600 TTGTATCTGGCTCGGACGAC 59.545 55.000 0.00 0.00 0.00 4.34
5425 8747 1.009900 GTATCTGGCTCGGACGACG 60.010 63.158 0.00 0.00 46.11 5.12
5426 8748 1.450848 TATCTGGCTCGGACGACGT 60.451 57.895 0.00 0.00 44.69 4.34
5427 8749 1.434622 TATCTGGCTCGGACGACGTC 61.435 60.000 19.70 19.70 44.69 4.34
5435 8757 3.363351 GGACGACGTCCCTTGAGT 58.637 61.111 32.51 0.00 46.19 3.41
5436 8758 1.080705 GGACGACGTCCCTTGAGTG 60.081 63.158 32.51 0.00 46.19 3.51
5437 8759 1.733399 GACGACGTCCCTTGAGTGC 60.733 63.158 17.25 0.00 0.00 4.40
5438 8760 2.143594 GACGACGTCCCTTGAGTGCT 62.144 60.000 17.25 0.00 0.00 4.40
5439 8761 0.892358 ACGACGTCCCTTGAGTGCTA 60.892 55.000 10.58 0.00 0.00 3.49
5440 8762 0.179161 CGACGTCCCTTGAGTGCTAG 60.179 60.000 10.58 0.00 0.00 3.42
5441 8763 0.889306 GACGTCCCTTGAGTGCTAGT 59.111 55.000 3.51 0.00 0.00 2.57
5442 8764 0.889306 ACGTCCCTTGAGTGCTAGTC 59.111 55.000 0.00 0.00 0.00 2.59
5443 8765 0.173708 CGTCCCTTGAGTGCTAGTCC 59.826 60.000 0.00 0.00 0.00 3.85
5444 8766 0.173708 GTCCCTTGAGTGCTAGTCCG 59.826 60.000 0.00 0.00 0.00 4.79
5445 8767 0.970937 TCCCTTGAGTGCTAGTCCGG 60.971 60.000 0.00 0.00 0.00 5.14
5446 8768 1.258445 CCCTTGAGTGCTAGTCCGGT 61.258 60.000 0.00 0.00 0.00 5.28
5447 8769 0.108615 CCTTGAGTGCTAGTCCGGTG 60.109 60.000 0.00 0.00 0.00 4.94
5448 8770 0.603569 CTTGAGTGCTAGTCCGGTGT 59.396 55.000 0.00 0.00 0.00 4.16
5449 8771 0.317160 TTGAGTGCTAGTCCGGTGTG 59.683 55.000 0.00 0.00 0.00 3.82
5450 8772 0.826256 TGAGTGCTAGTCCGGTGTGT 60.826 55.000 0.00 0.00 0.00 3.72
5451 8773 0.388649 GAGTGCTAGTCCGGTGTGTG 60.389 60.000 0.00 0.00 0.00 3.82
5452 8774 1.113517 AGTGCTAGTCCGGTGTGTGT 61.114 55.000 0.00 0.00 0.00 3.72
5453 8775 0.944311 GTGCTAGTCCGGTGTGTGTG 60.944 60.000 0.00 0.00 0.00 3.82
5454 8776 1.374252 GCTAGTCCGGTGTGTGTGG 60.374 63.158 0.00 0.00 0.00 4.17
5455 8777 2.046938 CTAGTCCGGTGTGTGTGGT 58.953 57.895 0.00 0.00 0.00 4.16
5456 8778 0.038526 CTAGTCCGGTGTGTGTGGTC 60.039 60.000 0.00 0.00 0.00 4.02
5457 8779 0.468585 TAGTCCGGTGTGTGTGGTCT 60.469 55.000 0.00 0.00 0.00 3.85
5458 8780 1.145377 GTCCGGTGTGTGTGGTCTT 59.855 57.895 0.00 0.00 0.00 3.01
5459 8781 0.878961 GTCCGGTGTGTGTGGTCTTC 60.879 60.000 0.00 0.00 0.00 2.87
5460 8782 1.954146 CCGGTGTGTGTGGTCTTCG 60.954 63.158 0.00 0.00 0.00 3.79
5461 8783 2.594962 CGGTGTGTGTGGTCTTCGC 61.595 63.158 0.00 0.00 0.00 4.70
5462 8784 1.227556 GGTGTGTGTGGTCTTCGCT 60.228 57.895 0.00 0.00 0.00 4.93
5463 8785 1.498865 GGTGTGTGTGGTCTTCGCTG 61.499 60.000 0.00 0.00 0.00 5.18
5464 8786 1.227527 TGTGTGTGGTCTTCGCTGG 60.228 57.895 0.00 0.00 0.00 4.85
5465 8787 1.227556 GTGTGTGGTCTTCGCTGGT 60.228 57.895 0.00 0.00 0.00 4.00
5466 8788 0.814010 GTGTGTGGTCTTCGCTGGTT 60.814 55.000 0.00 0.00 0.00 3.67
5467 8789 0.107410 TGTGTGGTCTTCGCTGGTTT 60.107 50.000 0.00 0.00 0.00 3.27
5468 8790 0.586802 GTGTGGTCTTCGCTGGTTTC 59.413 55.000 0.00 0.00 0.00 2.78
5469 8791 0.534203 TGTGGTCTTCGCTGGTTTCC 60.534 55.000 0.00 0.00 0.00 3.13
5470 8792 1.072505 TGGTCTTCGCTGGTTTCCC 59.927 57.895 0.00 0.00 0.00 3.97
5471 8793 1.375326 GGTCTTCGCTGGTTTCCCT 59.625 57.895 0.00 0.00 0.00 4.20
5472 8794 0.250770 GGTCTTCGCTGGTTTCCCTT 60.251 55.000 0.00 0.00 0.00 3.95
5473 8795 1.002773 GGTCTTCGCTGGTTTCCCTTA 59.997 52.381 0.00 0.00 0.00 2.69
5474 8796 2.551504 GGTCTTCGCTGGTTTCCCTTAA 60.552 50.000 0.00 0.00 0.00 1.85
5475 8797 3.344515 GTCTTCGCTGGTTTCCCTTAAT 58.655 45.455 0.00 0.00 0.00 1.40
5476 8798 3.756963 GTCTTCGCTGGTTTCCCTTAATT 59.243 43.478 0.00 0.00 0.00 1.40
5477 8799 4.939439 GTCTTCGCTGGTTTCCCTTAATTA 59.061 41.667 0.00 0.00 0.00 1.40
5478 8800 5.413523 GTCTTCGCTGGTTTCCCTTAATTAA 59.586 40.000 0.00 0.00 0.00 1.40
5479 8801 5.413523 TCTTCGCTGGTTTCCCTTAATTAAC 59.586 40.000 0.00 0.00 0.00 2.01
5480 8802 4.011698 TCGCTGGTTTCCCTTAATTAACC 58.988 43.478 0.00 0.00 40.31 2.85
5481 8803 3.181504 CGCTGGTTTCCCTTAATTAACCG 60.182 47.826 0.00 0.00 42.29 4.44
5482 8804 4.011698 GCTGGTTTCCCTTAATTAACCGA 58.988 43.478 0.00 0.00 42.29 4.69
5483 8805 4.643334 GCTGGTTTCCCTTAATTAACCGAT 59.357 41.667 0.00 0.00 42.29 4.18
5484 8806 5.449999 GCTGGTTTCCCTTAATTAACCGATG 60.450 44.000 0.00 0.00 42.29 3.84
5485 8807 4.399934 TGGTTTCCCTTAATTAACCGATGC 59.600 41.667 0.00 0.00 42.29 3.91
5486 8808 4.399934 GGTTTCCCTTAATTAACCGATGCA 59.600 41.667 0.00 0.00 31.64 3.96
5487 8809 5.068591 GGTTTCCCTTAATTAACCGATGCAT 59.931 40.000 0.00 0.00 31.64 3.96
5488 8810 5.766150 TTCCCTTAATTAACCGATGCATG 57.234 39.130 2.46 0.00 0.00 4.06
5489 8811 4.787551 TCCCTTAATTAACCGATGCATGT 58.212 39.130 2.46 0.00 0.00 3.21
5490 8812 5.931294 TCCCTTAATTAACCGATGCATGTA 58.069 37.500 2.46 0.00 0.00 2.29
5491 8813 6.539173 TCCCTTAATTAACCGATGCATGTAT 58.461 36.000 2.46 0.00 0.00 2.29
5492 8814 6.429692 TCCCTTAATTAACCGATGCATGTATG 59.570 38.462 2.46 0.00 0.00 2.39
5493 8815 6.349280 CCCTTAATTAACCGATGCATGTATGG 60.349 42.308 2.46 5.92 0.00 2.74
5494 8816 6.206634 CCTTAATTAACCGATGCATGTATGGT 59.793 38.462 2.46 6.56 33.45 3.55
5495 8817 7.255451 CCTTAATTAACCGATGCATGTATGGTT 60.255 37.037 23.34 23.34 44.61 3.67
5496 8818 6.463995 AATTAACCGATGCATGTATGGTTT 57.536 33.333 24.28 12.68 42.58 3.27
5497 8819 5.906113 TTAACCGATGCATGTATGGTTTT 57.094 34.783 24.28 12.53 42.58 2.43
5498 8820 4.799564 AACCGATGCATGTATGGTTTTT 57.200 36.364 18.14 4.52 39.83 1.94
5499 8821 4.108699 ACCGATGCATGTATGGTTTTTG 57.891 40.909 2.46 0.00 0.00 2.44
5500 8822 3.119173 ACCGATGCATGTATGGTTTTTGG 60.119 43.478 2.46 0.00 0.00 3.28
5501 8823 3.446799 CGATGCATGTATGGTTTTTGGG 58.553 45.455 2.46 0.00 0.00 4.12
5502 8824 3.119173 CGATGCATGTATGGTTTTTGGGT 60.119 43.478 2.46 0.00 0.00 4.51
5503 8825 3.951775 TGCATGTATGGTTTTTGGGTC 57.048 42.857 0.00 0.00 0.00 4.46
5504 8826 2.564947 TGCATGTATGGTTTTTGGGTCC 59.435 45.455 0.00 0.00 0.00 4.46
5505 8827 2.564947 GCATGTATGGTTTTTGGGTCCA 59.435 45.455 0.00 0.00 35.64 4.02
5506 8828 3.368323 GCATGTATGGTTTTTGGGTCCAG 60.368 47.826 0.00 0.00 34.62 3.86
5507 8829 3.603965 TGTATGGTTTTTGGGTCCAGT 57.396 42.857 0.00 0.00 34.62 4.00
5508 8830 3.917300 TGTATGGTTTTTGGGTCCAGTT 58.083 40.909 0.00 0.00 34.62 3.16
5509 8831 4.290942 TGTATGGTTTTTGGGTCCAGTTT 58.709 39.130 0.00 0.00 34.62 2.66
5510 8832 4.342665 TGTATGGTTTTTGGGTCCAGTTTC 59.657 41.667 0.00 0.00 34.62 2.78
5511 8833 2.112190 TGGTTTTTGGGTCCAGTTTCC 58.888 47.619 0.00 0.00 0.00 3.13
5512 8834 1.414919 GGTTTTTGGGTCCAGTTTCCC 59.585 52.381 0.00 0.00 43.67 3.97
5513 8835 2.394632 GTTTTTGGGTCCAGTTTCCCT 58.605 47.619 0.00 0.00 43.74 4.20
5514 8836 2.769663 GTTTTTGGGTCCAGTTTCCCTT 59.230 45.455 0.00 0.00 43.74 3.95
5515 8837 3.962063 GTTTTTGGGTCCAGTTTCCCTTA 59.038 43.478 0.00 0.00 43.74 2.69
5516 8838 4.479156 TTTTGGGTCCAGTTTCCCTTAT 57.521 40.909 0.00 0.00 43.74 1.73
5517 8839 4.479156 TTTGGGTCCAGTTTCCCTTATT 57.521 40.909 0.00 0.00 43.74 1.40
5518 8840 5.602291 TTTGGGTCCAGTTTCCCTTATTA 57.398 39.130 0.00 0.00 43.74 0.98
5519 8841 5.602291 TTGGGTCCAGTTTCCCTTATTAA 57.398 39.130 0.00 0.00 43.74 1.40
5520 8842 4.925836 TGGGTCCAGTTTCCCTTATTAAC 58.074 43.478 0.00 0.00 43.74 2.01
5521 8843 4.264038 TGGGTCCAGTTTCCCTTATTAACC 60.264 45.833 0.00 0.00 43.74 2.85
5522 8844 3.943381 GGTCCAGTTTCCCTTATTAACCG 59.057 47.826 0.00 0.00 0.00 4.44
5523 8845 3.943381 GTCCAGTTTCCCTTATTAACCGG 59.057 47.826 0.00 0.00 0.00 5.28
5524 8846 3.845398 TCCAGTTTCCCTTATTAACCGGA 59.155 43.478 9.46 0.00 0.00 5.14
5525 8847 3.943381 CCAGTTTCCCTTATTAACCGGAC 59.057 47.826 9.46 0.00 0.00 4.79
5526 8848 3.943381 CAGTTTCCCTTATTAACCGGACC 59.057 47.826 9.46 0.00 0.00 4.46
5527 8849 3.588396 AGTTTCCCTTATTAACCGGACCA 59.412 43.478 9.46 0.00 0.00 4.02
5528 8850 4.043184 AGTTTCCCTTATTAACCGGACCAA 59.957 41.667 9.46 0.00 0.00 3.67
5529 8851 3.632643 TCCCTTATTAACCGGACCAAC 57.367 47.619 9.46 0.00 0.00 3.77
5530 8852 3.183801 TCCCTTATTAACCGGACCAACT 58.816 45.455 9.46 0.00 0.00 3.16
5531 8853 3.198417 TCCCTTATTAACCGGACCAACTC 59.802 47.826 9.46 0.00 0.00 3.01
5532 8854 3.199289 CCCTTATTAACCGGACCAACTCT 59.801 47.826 9.46 0.00 0.00 3.24
5533 8855 4.439968 CCTTATTAACCGGACCAACTCTC 58.560 47.826 9.46 0.00 0.00 3.20
5534 8856 4.161754 CCTTATTAACCGGACCAACTCTCT 59.838 45.833 9.46 0.00 0.00 3.10
5535 8857 5.338137 CCTTATTAACCGGACCAACTCTCTT 60.338 44.000 9.46 0.00 0.00 2.85
5536 8858 3.672767 TTAACCGGACCAACTCTCTTC 57.327 47.619 9.46 0.00 0.00 2.87
5537 8859 1.718280 AACCGGACCAACTCTCTTCT 58.282 50.000 9.46 0.00 0.00 2.85
5538 8860 1.718280 ACCGGACCAACTCTCTTCTT 58.282 50.000 9.46 0.00 0.00 2.52
5539 8861 1.619332 ACCGGACCAACTCTCTTCTTC 59.381 52.381 9.46 0.00 0.00 2.87
5540 8862 1.896465 CCGGACCAACTCTCTTCTTCT 59.104 52.381 0.00 0.00 0.00 2.85
5541 8863 3.090037 CCGGACCAACTCTCTTCTTCTA 58.910 50.000 0.00 0.00 0.00 2.10
5542 8864 3.702045 CCGGACCAACTCTCTTCTTCTAT 59.298 47.826 0.00 0.00 0.00 1.98
5543 8865 4.888239 CCGGACCAACTCTCTTCTTCTATA 59.112 45.833 0.00 0.00 0.00 1.31
5544 8866 5.536916 CCGGACCAACTCTCTTCTTCTATAT 59.463 44.000 0.00 0.00 0.00 0.86
5545 8867 6.442952 CGGACCAACTCTCTTCTTCTATATG 58.557 44.000 0.00 0.00 0.00 1.78
5546 8868 6.220201 GGACCAACTCTCTTCTTCTATATGC 58.780 44.000 0.00 0.00 0.00 3.14
5547 8869 6.183360 GGACCAACTCTCTTCTTCTATATGCA 60.183 42.308 0.00 0.00 0.00 3.96
5548 8870 7.187824 ACCAACTCTCTTCTTCTATATGCAA 57.812 36.000 0.00 0.00 0.00 4.08
5549 8871 7.624549 ACCAACTCTCTTCTTCTATATGCAAA 58.375 34.615 0.00 0.00 0.00 3.68
5550 8872 8.270744 ACCAACTCTCTTCTTCTATATGCAAAT 58.729 33.333 0.00 0.00 0.00 2.32
5551 8873 8.557864 CCAACTCTCTTCTTCTATATGCAAATG 58.442 37.037 0.00 0.00 0.00 2.32
5552 8874 7.727331 ACTCTCTTCTTCTATATGCAAATGC 57.273 36.000 0.00 0.00 42.50 3.56
5553 8875 6.423302 ACTCTCTTCTTCTATATGCAAATGCG 59.577 38.462 0.00 0.00 45.83 4.73
5554 8876 5.698089 TCTCTTCTTCTATATGCAAATGCGG 59.302 40.000 0.00 0.00 45.83 5.69
5555 8877 4.756642 TCTTCTTCTATATGCAAATGCGGG 59.243 41.667 0.00 0.00 45.83 6.13
5556 8878 4.350368 TCTTCTATATGCAAATGCGGGA 57.650 40.909 0.00 0.00 45.83 5.14
5557 8879 4.318332 TCTTCTATATGCAAATGCGGGAG 58.682 43.478 0.00 0.00 45.83 4.30
5573 8895 4.488911 AGCTCCCCGCCCTCTGAT 62.489 66.667 0.00 0.00 40.39 2.90
5574 8896 4.247380 GCTCCCCGCCCTCTGATG 62.247 72.222 0.00 0.00 0.00 3.07
5575 8897 2.444706 CTCCCCGCCCTCTGATGA 60.445 66.667 0.00 0.00 0.00 2.92
5576 8898 2.444706 TCCCCGCCCTCTGATGAG 60.445 66.667 0.00 0.00 39.92 2.90
5589 8911 5.673337 CTCTGATGAGGTTTCGTCAAAAA 57.327 39.130 1.61 0.00 46.01 1.94
5687 9009 5.528043 TGCTCCAGATTGTTTGCTAAAAA 57.472 34.783 0.00 0.00 0.00 1.94
5732 9054 1.882623 GGGAACTTGTGAAGCTCTTGG 59.117 52.381 0.00 0.00 0.00 3.61
5792 9115 7.503566 CACATTTCCACATTTGAGAGGGTATAT 59.496 37.037 0.00 0.00 0.00 0.86
5978 9391 6.989659 TCCAGACGTTCACTCTTTAAGTAAT 58.010 36.000 0.00 0.00 36.07 1.89
6240 9663 7.387948 GTGATGGTGCTTATACGATAAAGGATT 59.612 37.037 0.00 0.00 0.00 3.01
6246 9669 7.592533 GTGCTTATACGATAAAGGATTACGTGA 59.407 37.037 0.00 0.00 38.18 4.35
6252 9675 4.510340 CGATAAAGGATTACGTGAAAGGGG 59.490 45.833 0.00 0.00 0.00 4.79
6339 9766 9.914834 TTTGAATATATGGGTTTAAGCTAGTGT 57.085 29.630 0.00 0.00 0.00 3.55
6340 9767 9.914834 TTGAATATATGGGTTTAAGCTAGTGTT 57.085 29.630 0.00 0.00 0.00 3.32
6343 9770 9.914834 AATATATGGGTTTAAGCTAGTGTTTGA 57.085 29.630 0.00 0.00 0.00 2.69
6344 9771 9.914834 ATATATGGGTTTAAGCTAGTGTTTGAA 57.085 29.630 0.00 0.00 0.00 2.69
6345 9772 5.761165 TGGGTTTAAGCTAGTGTTTGAAC 57.239 39.130 0.00 0.00 34.08 3.18
6346 9773 5.442391 TGGGTTTAAGCTAGTGTTTGAACT 58.558 37.500 0.00 0.00 34.81 3.01
6347 9774 5.889289 TGGGTTTAAGCTAGTGTTTGAACTT 59.111 36.000 0.00 0.00 34.81 2.66
6348 9775 6.378848 TGGGTTTAAGCTAGTGTTTGAACTTT 59.621 34.615 0.00 0.00 34.81 2.66
6349 9776 6.695713 GGGTTTAAGCTAGTGTTTGAACTTTG 59.304 38.462 0.00 0.00 34.81 2.77
6350 9777 7.255569 GGTTTAAGCTAGTGTTTGAACTTTGT 58.744 34.615 0.00 0.00 34.81 2.83
6351 9778 8.400186 GGTTTAAGCTAGTGTTTGAACTTTGTA 58.600 33.333 0.00 0.00 34.81 2.41
6352 9779 9.218359 GTTTAAGCTAGTGTTTGAACTTTGTAC 57.782 33.333 0.00 0.00 32.83 2.90
6355 9782 8.726870 AAGCTAGTGTTTGAACTTTGTACTAA 57.273 30.769 0.00 0.00 0.00 2.24
6356 9783 8.726870 AGCTAGTGTTTGAACTTTGTACTAAA 57.273 30.769 0.00 0.00 0.00 1.85
6357 9784 8.610035 AGCTAGTGTTTGAACTTTGTACTAAAC 58.390 33.333 0.00 0.00 0.00 2.01
6358 9785 7.854422 GCTAGTGTTTGAACTTTGTACTAAACC 59.146 37.037 0.00 0.00 0.00 3.27
6363 9790 8.667463 TGTTTGAACTTTGTACTAAACCTGTAC 58.333 33.333 0.00 0.00 40.27 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.640952 CACATAATAATCCTTTCTTCCCCTAAA 57.359 33.333 0.00 0.00 0.00 1.85
28 29 9.009675 TCACATAATAATCCTTTCTTCCCCTAA 57.990 33.333 0.00 0.00 0.00 2.69
29 30 8.575736 TCACATAATAATCCTTTCTTCCCCTA 57.424 34.615 0.00 0.00 0.00 3.53
30 31 7.465900 TCACATAATAATCCTTTCTTCCCCT 57.534 36.000 0.00 0.00 0.00 4.79
31 32 7.944554 TCATCACATAATAATCCTTTCTTCCCC 59.055 37.037 0.00 0.00 0.00 4.81
32 33 8.924511 TCATCACATAATAATCCTTTCTTCCC 57.075 34.615 0.00 0.00 0.00 3.97
36 37 9.293404 CCACATCATCACATAATAATCCTTTCT 57.707 33.333 0.00 0.00 0.00 2.52
37 38 8.025445 GCCACATCATCACATAATAATCCTTTC 58.975 37.037 0.00 0.00 0.00 2.62
38 39 7.506599 TGCCACATCATCACATAATAATCCTTT 59.493 33.333 0.00 0.00 0.00 3.11
39 40 7.005902 TGCCACATCATCACATAATAATCCTT 58.994 34.615 0.00 0.00 0.00 3.36
40 41 6.545567 TGCCACATCATCACATAATAATCCT 58.454 36.000 0.00 0.00 0.00 3.24
41 42 6.624423 GCTGCCACATCATCACATAATAATCC 60.624 42.308 0.00 0.00 0.00 3.01
42 43 6.072342 TGCTGCCACATCATCACATAATAATC 60.072 38.462 0.00 0.00 0.00 1.75
43 44 5.771165 TGCTGCCACATCATCACATAATAAT 59.229 36.000 0.00 0.00 0.00 1.28
44 45 5.008911 GTGCTGCCACATCATCACATAATAA 59.991 40.000 0.00 0.00 41.67 1.40
45 46 4.516321 GTGCTGCCACATCATCACATAATA 59.484 41.667 0.00 0.00 41.67 0.98
46 47 3.317149 GTGCTGCCACATCATCACATAAT 59.683 43.478 0.00 0.00 41.67 1.28
47 48 2.684374 GTGCTGCCACATCATCACATAA 59.316 45.455 0.00 0.00 41.67 1.90
48 49 2.291365 GTGCTGCCACATCATCACATA 58.709 47.619 0.00 0.00 41.67 2.29
49 50 1.100510 GTGCTGCCACATCATCACAT 58.899 50.000 0.00 0.00 41.67 3.21
50 51 0.961857 GGTGCTGCCACATCATCACA 60.962 55.000 0.00 0.00 43.88 3.58
51 52 0.679002 AGGTGCTGCCACATCATCAC 60.679 55.000 0.00 0.00 43.88 3.06
52 53 0.038599 AAGGTGCTGCCACATCATCA 59.961 50.000 0.00 0.00 43.88 3.07
53 54 0.454600 CAAGGTGCTGCCACATCATC 59.545 55.000 0.00 0.00 43.88 2.92
54 55 0.968901 CCAAGGTGCTGCCACATCAT 60.969 55.000 0.00 0.00 43.88 2.45
55 56 1.604308 CCAAGGTGCTGCCACATCA 60.604 57.895 0.00 0.00 43.88 3.07
56 57 1.181098 AACCAAGGTGCTGCCACATC 61.181 55.000 0.00 0.00 43.88 3.06
57 58 0.760189 AAACCAAGGTGCTGCCACAT 60.760 50.000 0.00 0.00 43.88 3.21
58 59 0.975040 AAAACCAAGGTGCTGCCACA 60.975 50.000 0.00 0.00 43.88 4.17
59 60 0.177836 AAAAACCAAGGTGCTGCCAC 59.822 50.000 0.00 0.00 40.61 5.01
60 61 0.463620 GAAAAACCAAGGTGCTGCCA 59.536 50.000 0.00 0.00 40.61 4.92
61 62 0.752658 AGAAAAACCAAGGTGCTGCC 59.247 50.000 0.00 0.00 37.58 4.85
62 63 2.602257 AAGAAAAACCAAGGTGCTGC 57.398 45.000 0.00 0.00 0.00 5.25
63 64 5.178061 AGAAAAAGAAAAACCAAGGTGCTG 58.822 37.500 0.00 0.00 0.00 4.41
64 65 5.420725 AGAAAAAGAAAAACCAAGGTGCT 57.579 34.783 0.00 0.00 0.00 4.40
65 66 6.371548 AGAAAGAAAAAGAAAAACCAAGGTGC 59.628 34.615 0.00 0.00 0.00 5.01
66 67 7.905604 AGAAAGAAAAAGAAAAACCAAGGTG 57.094 32.000 0.00 0.00 0.00 4.00
67 68 8.918202 AAAGAAAGAAAAAGAAAAACCAAGGT 57.082 26.923 0.00 0.00 0.00 3.50
68 69 9.611284 CAAAAGAAAGAAAAAGAAAAACCAAGG 57.389 29.630 0.00 0.00 0.00 3.61
71 72 8.503196 GCTCAAAAGAAAGAAAAAGAAAAACCA 58.497 29.630 0.00 0.00 0.00 3.67
72 73 8.503196 TGCTCAAAAGAAAGAAAAAGAAAAACC 58.497 29.630 0.00 0.00 0.00 3.27
73 74 9.877137 TTGCTCAAAAGAAAGAAAAAGAAAAAC 57.123 25.926 0.00 0.00 0.00 2.43
78 79 9.218440 ACATTTTGCTCAAAAGAAAGAAAAAGA 57.782 25.926 12.51 0.00 42.72 2.52
79 80 9.269415 CACATTTTGCTCAAAAGAAAGAAAAAG 57.731 29.630 12.51 0.00 42.72 2.27
80 81 8.235905 CCACATTTTGCTCAAAAGAAAGAAAAA 58.764 29.630 12.51 0.00 42.72 1.94
81 82 7.626028 GCCACATTTTGCTCAAAAGAAAGAAAA 60.626 33.333 12.51 0.00 42.72 2.29
82 83 6.183360 GCCACATTTTGCTCAAAAGAAAGAAA 60.183 34.615 12.51 0.00 42.72 2.52
83 84 5.294060 GCCACATTTTGCTCAAAAGAAAGAA 59.706 36.000 12.51 0.00 42.72 2.52
84 85 4.810491 GCCACATTTTGCTCAAAAGAAAGA 59.190 37.500 12.51 0.00 42.72 2.52
85 86 4.318263 CGCCACATTTTGCTCAAAAGAAAG 60.318 41.667 12.51 6.17 42.72 2.62
86 87 3.555139 CGCCACATTTTGCTCAAAAGAAA 59.445 39.130 12.51 0.00 42.72 2.52
87 88 3.122297 CGCCACATTTTGCTCAAAAGAA 58.878 40.909 12.51 0.00 42.72 2.52
88 89 2.545532 CCGCCACATTTTGCTCAAAAGA 60.546 45.455 12.51 0.00 42.72 2.52
89 90 1.794116 CCGCCACATTTTGCTCAAAAG 59.206 47.619 12.51 7.93 42.72 2.27
90 91 1.863267 CCGCCACATTTTGCTCAAAA 58.137 45.000 9.83 9.83 43.48 2.44
91 92 0.599728 GCCGCCACATTTTGCTCAAA 60.600 50.000 0.00 0.00 0.00 2.69
92 93 1.006337 GCCGCCACATTTTGCTCAA 60.006 52.632 0.00 0.00 0.00 3.02
93 94 2.198969 TGCCGCCACATTTTGCTCA 61.199 52.632 0.00 0.00 0.00 4.26
94 95 1.734117 GTGCCGCCACATTTTGCTC 60.734 57.895 0.00 0.00 41.67 4.26
95 96 2.339712 GTGCCGCCACATTTTGCT 59.660 55.556 0.00 0.00 41.67 3.91
96 97 2.713927 AAGGTGCCGCCACATTTTGC 62.714 55.000 0.00 0.00 42.74 3.68
97 98 0.945265 CAAGGTGCCGCCACATTTTG 60.945 55.000 0.00 0.00 42.74 2.44
98 99 1.367102 CAAGGTGCCGCCACATTTT 59.633 52.632 0.00 0.00 42.74 1.82
99 100 2.573083 CCAAGGTGCCGCCACATTT 61.573 57.895 0.00 0.00 42.74 2.32
100 101 2.990967 CCAAGGTGCCGCCACATT 60.991 61.111 0.00 0.00 45.86 2.71
101 102 4.284550 ACCAAGGTGCCGCCACAT 62.285 61.111 0.00 0.00 43.88 3.21
111 112 2.029073 CGCGTCAGACACCAAGGT 59.971 61.111 0.00 0.00 0.00 3.50
112 113 2.022129 GTCGCGTCAGACACCAAGG 61.022 63.158 5.77 0.00 40.65 3.61
113 114 2.365068 CGTCGCGTCAGACACCAAG 61.365 63.158 5.77 0.00 40.98 3.61
114 115 2.354188 CGTCGCGTCAGACACCAA 60.354 61.111 5.77 0.00 40.98 3.67
115 116 4.337060 CCGTCGCGTCAGACACCA 62.337 66.667 5.77 0.00 40.98 4.17
116 117 2.969806 TACCGTCGCGTCAGACACC 61.970 63.158 5.77 0.00 40.98 4.16
117 118 1.795177 GTACCGTCGCGTCAGACAC 60.795 63.158 5.77 0.00 40.98 3.67
118 119 1.509644 AAGTACCGTCGCGTCAGACA 61.510 55.000 5.77 0.00 40.98 3.41
119 120 0.386478 AAAGTACCGTCGCGTCAGAC 60.386 55.000 5.77 0.00 37.76 3.51
120 121 0.311790 AAAAGTACCGTCGCGTCAGA 59.688 50.000 5.77 0.00 0.00 3.27
121 122 0.433492 CAAAAGTACCGTCGCGTCAG 59.567 55.000 5.77 0.00 0.00 3.51
122 123 0.940519 CCAAAAGTACCGTCGCGTCA 60.941 55.000 5.77 0.00 0.00 4.35
123 124 1.620413 CCCAAAAGTACCGTCGCGTC 61.620 60.000 5.77 0.00 0.00 5.19
129 130 1.074248 CCTGGCCCAAAAGTACCGT 59.926 57.895 0.00 0.00 0.00 4.83
135 136 7.651704 CGTAAATAAATATTCCTGGCCCAAAAG 59.348 37.037 0.00 0.00 0.00 2.27
157 158 5.611128 TGGGTTGCATAACTATACCGTAA 57.389 39.130 0.00 0.00 36.99 3.18
158 159 5.811796 ATGGGTTGCATAACTATACCGTA 57.188 39.130 0.00 0.00 36.99 4.02
159 160 4.699925 ATGGGTTGCATAACTATACCGT 57.300 40.909 0.00 0.00 36.99 4.83
160 161 6.460781 TCTAATGGGTTGCATAACTATACCG 58.539 40.000 0.00 0.00 36.99 4.02
211 212 1.379527 CGACTTGGGACCTAAATGGC 58.620 55.000 0.00 0.00 40.22 4.40
212 213 1.379527 GCGACTTGGGACCTAAATGG 58.620 55.000 0.00 0.00 42.93 3.16
224 243 0.602905 AGAAGGAAACCGGCGACTTG 60.603 55.000 9.30 0.00 0.00 3.16
227 246 0.320508 AGAAGAAGGAAACCGGCGAC 60.321 55.000 9.30 0.00 0.00 5.19
229 248 0.320421 TGAGAAGAAGGAAACCGGCG 60.320 55.000 0.00 0.00 0.00 6.46
233 252 8.397575 AGTCTATTTTTGAGAAGAAGGAAACC 57.602 34.615 0.00 0.00 0.00 3.27
234 253 8.508062 GGAGTCTATTTTTGAGAAGAAGGAAAC 58.492 37.037 0.00 0.00 0.00 2.78
237 256 7.162082 GTGGAGTCTATTTTTGAGAAGAAGGA 58.838 38.462 0.00 0.00 0.00 3.36
238 257 6.372937 GGTGGAGTCTATTTTTGAGAAGAAGG 59.627 42.308 0.00 0.00 0.00 3.46
239 258 6.936900 TGGTGGAGTCTATTTTTGAGAAGAAG 59.063 38.462 0.00 0.00 0.00 2.85
242 261 5.412904 GGTGGTGGAGTCTATTTTTGAGAAG 59.587 44.000 0.00 0.00 0.00 2.85
253 272 2.571653 CTGATTTGGGTGGTGGAGTCTA 59.428 50.000 0.00 0.00 0.00 2.59
279 344 0.629596 AGTATCGGTGAGGAGGGTCA 59.370 55.000 0.00 0.00 0.00 4.02
280 345 1.033574 CAGTATCGGTGAGGAGGGTC 58.966 60.000 0.00 0.00 0.00 4.46
285 350 2.073252 ATCTGCAGTATCGGTGAGGA 57.927 50.000 14.67 0.00 0.00 3.71
286 351 2.898729 AATCTGCAGTATCGGTGAGG 57.101 50.000 14.67 0.00 0.00 3.86
287 352 5.632764 CAGATTAATCTGCAGTATCGGTGAG 59.367 44.000 27.87 4.27 46.63 3.51
301 366 2.024414 GCGGCAAACCCAGATTAATCT 58.976 47.619 12.37 12.37 37.72 2.40
302 367 1.067060 GGCGGCAAACCCAGATTAATC 59.933 52.381 7.41 7.41 0.00 1.75
303 368 1.111277 GGCGGCAAACCCAGATTAAT 58.889 50.000 3.07 0.00 0.00 1.40
304 369 1.309499 CGGCGGCAAACCCAGATTAA 61.309 55.000 10.53 0.00 0.00 1.40
305 370 1.747367 CGGCGGCAAACCCAGATTA 60.747 57.895 10.53 0.00 0.00 1.75
306 371 3.061848 CGGCGGCAAACCCAGATT 61.062 61.111 10.53 0.00 0.00 2.40
352 417 3.317993 CGTTTCAGTCCAAGGAACCAATT 59.682 43.478 0.00 0.00 0.00 2.32
354 419 2.092861 TCGTTTCAGTCCAAGGAACCAA 60.093 45.455 0.00 0.00 0.00 3.67
356 421 2.143925 CTCGTTTCAGTCCAAGGAACC 58.856 52.381 0.00 0.00 0.00 3.62
413 488 2.476051 GACGCCGCAGTCAATGTG 59.524 61.111 9.53 0.00 40.65 3.21
446 521 0.507358 GAACGACAAGGACGAACAGC 59.493 55.000 0.00 0.00 34.70 4.40
456 531 0.861837 GTGCTGTCTGGAACGACAAG 59.138 55.000 0.00 0.00 40.11 3.16
464 539 2.653115 CTCGCTGTGCTGTCTGGA 59.347 61.111 0.00 0.00 0.00 3.86
498 573 5.410439 TCATGTTCAGATGGATCGCATAATG 59.590 40.000 0.00 1.42 0.00 1.90
503 578 2.985957 TCATGTTCAGATGGATCGCA 57.014 45.000 0.00 0.00 0.00 5.10
519 594 4.840115 ACCCCAAGTGAACAATCAATTCAT 59.160 37.500 0.00 0.00 41.59 2.57
520 595 4.222336 ACCCCAAGTGAACAATCAATTCA 58.778 39.130 0.00 0.00 41.59 2.57
521 596 4.871933 ACCCCAAGTGAACAATCAATTC 57.128 40.909 0.00 0.00 41.59 2.17
522 597 6.739331 TTAACCCCAAGTGAACAATCAATT 57.261 33.333 0.00 0.00 44.13 2.32
523 598 6.269769 ACATTAACCCCAAGTGAACAATCAAT 59.730 34.615 0.00 0.00 37.30 2.57
587 1954 5.646606 GAGAGTCTGCTTAACTAACTCCAG 58.353 45.833 0.00 0.00 37.63 3.86
595 1963 1.135632 GCGTCGAGAGTCTGCTTAACT 60.136 52.381 0.00 0.00 0.00 2.24
795 2163 4.281941 TCCTTCTCCATCTATGATCAACGG 59.718 45.833 0.00 0.00 0.00 4.44
859 2227 1.744320 CGGACCTCGGCATGACCATA 61.744 60.000 0.00 0.00 39.03 2.74
954 2322 5.904362 AGAATTTGGCCAACACTCTATTC 57.096 39.130 20.35 21.75 0.00 1.75
1024 2392 2.423538 CCAAATCCATTGTCTCCCGAAC 59.576 50.000 0.00 0.00 37.32 3.95
1027 2395 1.745087 CACCAAATCCATTGTCTCCCG 59.255 52.381 0.00 0.00 37.32 5.14
1169 2575 3.011595 TGATTTGGTGAGATTGGGGTCAT 59.988 43.478 0.00 0.00 0.00 3.06
1189 2595 4.383173 CTCATGGCATTGTAGCAGTATGA 58.617 43.478 0.00 0.00 39.69 2.15
1242 2648 4.706842 ATGTACCTTGTGGAAGAAGTGT 57.293 40.909 0.00 0.00 35.02 3.55
1270 2676 4.746115 ACATGCAGCAAATTTTGTACTGTG 59.254 37.500 10.65 7.90 0.00 3.66
1433 2842 3.547746 TGTTAACTCCACCAGTTTGTCC 58.452 45.455 7.22 0.00 43.38 4.02
1530 2939 6.036735 TCGACGGCTATCTTAATTTGGAAAAG 59.963 38.462 0.00 0.00 0.00 2.27
1547 2956 1.816835 TCTAAACACTGATCGACGGCT 59.183 47.619 0.00 0.00 0.00 5.52
1704 4272 1.144057 CATCTAGGCGGGCGAACTT 59.856 57.895 0.00 0.00 0.00 2.66
1939 4510 4.441495 GCTTGACAAATGGTTATTAGCCCC 60.441 45.833 0.00 0.00 0.00 5.80
2018 4618 1.611491 GGCACCAAAGGAATCGTTTCA 59.389 47.619 8.41 0.00 33.23 2.69
2056 4656 7.704472 TGTGAATAACTCAAATGGTTTGACAAC 59.296 33.333 1.24 0.00 44.21 3.32
2234 4845 1.670083 GCCTCGTAGTGGGCGTTTT 60.670 57.895 0.00 0.00 42.22 2.43
2277 4895 8.918202 ATGTGATCAGAACTTTAGTTTGGTTA 57.082 30.769 0.00 0.00 38.56 2.85
2294 4912 2.942376 GTGCGGGATTGTAATGTGATCA 59.058 45.455 0.00 0.00 0.00 2.92
2329 4947 9.875675 GAGCTTTGTTTCTTATATTCTGCATAG 57.124 33.333 0.00 0.00 0.00 2.23
2398 5020 5.482175 TCACTTTTGGAAAACCTTTTGGAGA 59.518 36.000 0.00 0.00 44.07 3.71
2616 5249 6.091305 GGCTACCTTTGAATTCAAGAAAATGC 59.909 38.462 19.64 18.43 37.15 3.56
2710 5343 2.446435 TGGTGCTATGCTTTTCTTCCC 58.554 47.619 0.00 0.00 0.00 3.97
2852 5485 1.843851 TCCCAGGTGTTCTTTCTGTGT 59.156 47.619 0.00 0.00 0.00 3.72
3134 5788 5.073428 AGTGGAGATATATTCAGACGCAGA 58.927 41.667 0.00 0.00 0.00 4.26
3163 5817 9.599322 CGATACTATTGCTCAATTTATCAAACC 57.401 33.333 16.12 0.00 31.10 3.27
3414 6068 0.322456 GGCTGTGGCAAGATGTGGTA 60.322 55.000 0.00 0.00 40.87 3.25
3438 6092 3.773119 GGTGGTGGAAGTTAGATACAGGA 59.227 47.826 0.00 0.00 0.00 3.86
3504 6158 1.230212 GAATAAGGGTGGGCTGGGG 59.770 63.158 0.00 0.00 0.00 4.96
3573 6229 1.814429 TTTTCTGGTGTGGAGGGAGA 58.186 50.000 0.00 0.00 0.00 3.71
3757 6413 4.082845 TCTGACTGGGAGTATATAGCAGC 58.917 47.826 0.00 0.00 0.00 5.25
3949 6865 7.065443 CAGATGATACTGTTCTTTGCATTGAGA 59.935 37.037 0.00 0.00 33.73 3.27
4136 7052 2.127708 ACTGTAGGCCCCTATTTCCAG 58.872 52.381 0.00 3.25 0.00 3.86
4192 7109 9.710900 CATTTACAGCATCCATGTTATACTCTA 57.289 33.333 0.00 0.00 32.02 2.43
4193 7110 8.432013 TCATTTACAGCATCCATGTTATACTCT 58.568 33.333 0.00 0.00 32.02 3.24
4194 7111 8.607441 TCATTTACAGCATCCATGTTATACTC 57.393 34.615 0.00 0.00 32.02 2.59
4195 7112 8.978874 TTCATTTACAGCATCCATGTTATACT 57.021 30.769 0.00 0.00 32.02 2.12
4260 7177 5.391312 TTCCCTTTTTAATCAGAGCAAGC 57.609 39.130 0.00 0.00 0.00 4.01
4265 7182 8.837788 AATGCTTTTTCCCTTTTTAATCAGAG 57.162 30.769 0.00 0.00 0.00 3.35
4266 7183 8.650490 AGAATGCTTTTTCCCTTTTTAATCAGA 58.350 29.630 0.00 0.00 0.00 3.27
4397 7316 6.014584 GGGGTTTTCAAATGATCAGGTTAACT 60.015 38.462 5.42 0.00 0.00 2.24
4398 7317 6.014584 AGGGGTTTTCAAATGATCAGGTTAAC 60.015 38.462 0.09 0.00 0.00 2.01
4524 7810 2.622452 CCTGCACAGAAGGAATTGGGAT 60.622 50.000 0.00 0.00 36.91 3.85
4571 7857 9.507329 AGATTCTAAAGCTCAGTAAATTTGTCA 57.493 29.630 0.00 0.00 0.00 3.58
4589 7875 8.299570 GCCAGAAATTTGAGTGAAAGATTCTAA 58.700 33.333 0.00 0.00 34.36 2.10
4591 7877 6.266103 TGCCAGAAATTTGAGTGAAAGATTCT 59.734 34.615 0.00 1.67 35.53 2.40
4592 7878 6.364435 GTGCCAGAAATTTGAGTGAAAGATTC 59.636 38.462 0.00 0.00 0.00 2.52
4627 7913 4.691860 AACAAATCAAGCGATTCCTCTG 57.308 40.909 0.00 0.00 41.12 3.35
4631 7917 4.545610 TGACAAACAAATCAAGCGATTCC 58.454 39.130 0.00 0.00 41.12 3.01
4632 7918 6.132353 CTTGACAAACAAATCAAGCGATTC 57.868 37.500 1.36 0.00 43.83 2.52
4701 7987 6.596497 AGAAATAAAAAGCCATTGAATGCTGG 59.404 34.615 0.00 0.00 38.00 4.85
4702 7988 7.605410 AGAAATAAAAAGCCATTGAATGCTG 57.395 32.000 0.00 0.00 38.00 4.41
4703 7989 9.723601 TTTAGAAATAAAAAGCCATTGAATGCT 57.276 25.926 0.00 0.00 40.17 3.79
4758 8044 9.506018 GGCGGGGTATATAAGTATTTAGAAAAA 57.494 33.333 0.00 0.00 0.00 1.94
4759 8045 8.658619 TGGCGGGGTATATAAGTATTTAGAAAA 58.341 33.333 0.00 0.00 0.00 2.29
4763 8049 9.924650 GATATGGCGGGGTATATAAGTATTTAG 57.075 37.037 0.00 0.00 0.00 1.85
4765 8051 7.202158 GGGATATGGCGGGGTATATAAGTATTT 60.202 40.741 0.00 0.00 0.00 1.40
4766 8052 6.271624 GGGATATGGCGGGGTATATAAGTATT 59.728 42.308 0.00 0.00 0.00 1.89
4767 8053 5.783875 GGGATATGGCGGGGTATATAAGTAT 59.216 44.000 0.00 0.00 0.00 2.12
4768 8054 5.149976 GGGATATGGCGGGGTATATAAGTA 58.850 45.833 0.00 0.00 0.00 2.24
4769 8055 3.971971 GGGATATGGCGGGGTATATAAGT 59.028 47.826 0.00 0.00 0.00 2.24
4770 8056 3.326880 GGGGATATGGCGGGGTATATAAG 59.673 52.174 0.00 0.00 0.00 1.73
4772 8058 2.757262 CGGGGATATGGCGGGGTATATA 60.757 54.545 0.00 0.00 0.00 0.86
4776 8062 2.605295 CGGGGATATGGCGGGGTA 60.605 66.667 0.00 0.00 0.00 3.69
4777 8063 4.567597 TCGGGGATATGGCGGGGT 62.568 66.667 0.00 0.00 0.00 4.95
4778 8064 2.602676 ATTCGGGGATATGGCGGGG 61.603 63.158 0.00 0.00 0.00 5.73
4779 8065 1.377202 CATTCGGGGATATGGCGGG 60.377 63.158 0.00 0.00 0.00 6.13
4780 8066 1.377202 CCATTCGGGGATATGGCGG 60.377 63.158 0.00 0.00 35.31 6.13
4781 8067 4.301505 CCATTCGGGGATATGGCG 57.698 61.111 0.00 0.00 35.31 5.69
4783 8069 0.401738 ACTGCCATTCGGGGATATGG 59.598 55.000 0.00 0.00 43.40 2.74
4784 8070 2.276732 AACTGCCATTCGGGGATATG 57.723 50.000 0.00 0.00 35.87 1.78
4785 8071 3.312736 AAAACTGCCATTCGGGGATAT 57.687 42.857 0.00 0.00 35.87 1.63
4786 8072 2.818751 AAAACTGCCATTCGGGGATA 57.181 45.000 0.00 0.00 35.87 2.59
4788 8074 3.448469 AAAAACTGCCATTCGGGGA 57.552 47.368 0.00 0.00 37.04 4.81
4804 8090 3.495670 CGGGATACGGCATTTTCAAAA 57.504 42.857 0.00 0.00 39.42 2.44
4827 8113 1.183549 GTGAGCTAAGAAGACGGGGA 58.816 55.000 0.00 0.00 0.00 4.81
4828 8114 0.895530 TGTGAGCTAAGAAGACGGGG 59.104 55.000 0.00 0.00 0.00 5.73
4829 8115 2.028930 AGTTGTGAGCTAAGAAGACGGG 60.029 50.000 0.00 0.00 0.00 5.28
4830 8116 3.305398 AGTTGTGAGCTAAGAAGACGG 57.695 47.619 0.00 0.00 0.00 4.79
4831 8117 5.049398 AGTAGTTGTGAGCTAAGAAGACG 57.951 43.478 0.00 0.00 0.00 4.18
4833 8119 6.682746 CAGAAGTAGTTGTGAGCTAAGAAGA 58.317 40.000 1.15 0.00 0.00 2.87
4834 8120 5.347364 GCAGAAGTAGTTGTGAGCTAAGAAG 59.653 44.000 11.45 0.00 0.00 2.85
4837 8123 4.560128 TGCAGAAGTAGTTGTGAGCTAAG 58.440 43.478 11.45 0.00 0.00 2.18
4838 8124 4.600692 TGCAGAAGTAGTTGTGAGCTAA 57.399 40.909 11.45 0.00 0.00 3.09
4839 8125 4.808414 ATGCAGAAGTAGTTGTGAGCTA 57.192 40.909 11.45 0.00 0.00 3.32
4840 8126 3.692257 ATGCAGAAGTAGTTGTGAGCT 57.308 42.857 11.45 0.00 0.00 4.09
4841 8127 4.023707 ACAAATGCAGAAGTAGTTGTGAGC 60.024 41.667 11.45 0.00 44.71 4.26
4842 8128 5.237127 TGACAAATGCAGAAGTAGTTGTGAG 59.763 40.000 11.45 0.00 45.99 3.51
4843 8129 5.122519 TGACAAATGCAGAAGTAGTTGTGA 58.877 37.500 11.45 0.00 45.99 3.58
4844 8130 5.422666 TGACAAATGCAGAAGTAGTTGTG 57.577 39.130 4.31 3.09 45.99 3.33
4891 8201 4.899502 AGGTTGAAAGTGGACAGACATAG 58.100 43.478 0.00 0.00 0.00 2.23
4935 8245 4.221703 TGGAAGCTCAAGTTTCACCAAAAA 59.778 37.500 8.56 0.00 37.05 1.94
4968 8278 8.713271 GCTTGCTTCGCTAAATTATAGAGTTAT 58.287 33.333 0.00 0.00 0.00 1.89
4977 8288 2.097466 GCAGGCTTGCTTCGCTAAATTA 59.903 45.455 14.45 0.00 46.95 1.40
5107 8423 4.852134 TGCAAATCACAAATGCACTAGT 57.148 36.364 0.00 0.00 44.52 2.57
5152 8468 5.026038 TGTGTGATGTGATATCATGCAGA 57.974 39.130 9.02 3.71 0.00 4.26
5153 8469 4.814771 ACTGTGTGATGTGATATCATGCAG 59.185 41.667 9.02 17.35 37.97 4.41
5154 8470 4.773013 ACTGTGTGATGTGATATCATGCA 58.227 39.130 9.02 3.48 0.00 3.96
5155 8471 5.507974 CAACTGTGTGATGTGATATCATGC 58.492 41.667 9.02 2.33 0.00 4.06
5287 8609 5.344743 TGCTAAGAGACCCTAATCACTTG 57.655 43.478 0.00 0.00 32.61 3.16
5337 8659 0.491823 TCTTGGGAACTGAGAGGGGA 59.508 55.000 0.00 0.00 0.00 4.81
5405 8727 0.454600 GTCGTCCGAGCCAGATACAA 59.545 55.000 0.00 0.00 0.00 2.41
5406 8728 1.712018 CGTCGTCCGAGCCAGATACA 61.712 60.000 0.00 0.00 39.56 2.29
5407 8729 1.009900 CGTCGTCCGAGCCAGATAC 60.010 63.158 0.00 0.00 39.56 2.24
5408 8730 1.434622 GACGTCGTCCGAGCCAGATA 61.435 60.000 14.60 0.00 40.70 1.98
5409 8731 2.750637 ACGTCGTCCGAGCCAGAT 60.751 61.111 0.00 0.00 40.70 2.90
5410 8732 3.429141 GACGTCGTCCGAGCCAGA 61.429 66.667 14.60 0.00 40.70 3.86
5411 8733 4.477975 GGACGTCGTCCGAGCCAG 62.478 72.222 27.59 0.00 43.14 4.85
5419 8741 1.733399 GCACTCAAGGGACGTCGTC 60.733 63.158 17.16 17.16 0.00 4.20
5420 8742 0.892358 TAGCACTCAAGGGACGTCGT 60.892 55.000 9.92 0.00 0.00 4.34
5421 8743 0.179161 CTAGCACTCAAGGGACGTCG 60.179 60.000 9.92 0.00 0.00 5.12
5422 8744 0.889306 ACTAGCACTCAAGGGACGTC 59.111 55.000 7.13 7.13 0.00 4.34
5423 8745 0.889306 GACTAGCACTCAAGGGACGT 59.111 55.000 0.00 0.00 0.00 4.34
5424 8746 0.173708 GGACTAGCACTCAAGGGACG 59.826 60.000 0.00 0.00 0.00 4.79
5425 8747 0.173708 CGGACTAGCACTCAAGGGAC 59.826 60.000 0.00 0.00 0.00 4.46
5426 8748 0.970937 CCGGACTAGCACTCAAGGGA 60.971 60.000 0.00 0.00 0.00 4.20
5427 8749 1.258445 ACCGGACTAGCACTCAAGGG 61.258 60.000 9.46 0.00 0.00 3.95
5428 8750 0.108615 CACCGGACTAGCACTCAAGG 60.109 60.000 9.46 0.00 0.00 3.61
5429 8751 0.603569 ACACCGGACTAGCACTCAAG 59.396 55.000 9.46 0.00 0.00 3.02
5430 8752 0.317160 CACACCGGACTAGCACTCAA 59.683 55.000 9.46 0.00 0.00 3.02
5431 8753 0.826256 ACACACCGGACTAGCACTCA 60.826 55.000 9.46 0.00 0.00 3.41
5432 8754 0.388649 CACACACCGGACTAGCACTC 60.389 60.000 9.46 0.00 0.00 3.51
5433 8755 1.113517 ACACACACCGGACTAGCACT 61.114 55.000 9.46 0.00 0.00 4.40
5434 8756 0.944311 CACACACACCGGACTAGCAC 60.944 60.000 9.46 0.00 0.00 4.40
5435 8757 1.365999 CACACACACCGGACTAGCA 59.634 57.895 9.46 0.00 0.00 3.49
5436 8758 1.374252 CCACACACACCGGACTAGC 60.374 63.158 9.46 0.00 0.00 3.42
5437 8759 0.038526 GACCACACACACCGGACTAG 60.039 60.000 9.46 0.00 0.00 2.57
5438 8760 0.468585 AGACCACACACACCGGACTA 60.469 55.000 9.46 0.00 0.00 2.59
5439 8761 1.335132 AAGACCACACACACCGGACT 61.335 55.000 9.46 0.00 0.00 3.85
5440 8762 0.878961 GAAGACCACACACACCGGAC 60.879 60.000 9.46 0.00 0.00 4.79
5441 8763 1.444250 GAAGACCACACACACCGGA 59.556 57.895 9.46 0.00 0.00 5.14
5442 8764 1.954146 CGAAGACCACACACACCGG 60.954 63.158 0.00 0.00 0.00 5.28
5443 8765 2.594962 GCGAAGACCACACACACCG 61.595 63.158 0.00 0.00 0.00 4.94
5444 8766 1.227556 AGCGAAGACCACACACACC 60.228 57.895 0.00 0.00 0.00 4.16
5445 8767 1.498865 CCAGCGAAGACCACACACAC 61.499 60.000 0.00 0.00 0.00 3.82
5446 8768 1.227527 CCAGCGAAGACCACACACA 60.228 57.895 0.00 0.00 0.00 3.72
5447 8769 0.814010 AACCAGCGAAGACCACACAC 60.814 55.000 0.00 0.00 0.00 3.82
5448 8770 0.107410 AAACCAGCGAAGACCACACA 60.107 50.000 0.00 0.00 0.00 3.72
5449 8771 0.586802 GAAACCAGCGAAGACCACAC 59.413 55.000 0.00 0.00 0.00 3.82
5450 8772 0.534203 GGAAACCAGCGAAGACCACA 60.534 55.000 0.00 0.00 0.00 4.17
5451 8773 2.244946 GGAAACCAGCGAAGACCAC 58.755 57.895 0.00 0.00 0.00 4.16
5452 8774 4.792087 GGAAACCAGCGAAGACCA 57.208 55.556 0.00 0.00 0.00 4.02
5464 8786 5.570234 TGCATCGGTTAATTAAGGGAAAC 57.430 39.130 0.00 0.00 0.00 2.78
5465 8787 5.654650 ACATGCATCGGTTAATTAAGGGAAA 59.345 36.000 0.00 0.00 0.00 3.13
5466 8788 5.197451 ACATGCATCGGTTAATTAAGGGAA 58.803 37.500 0.00 0.00 0.00 3.97
5467 8789 4.787551 ACATGCATCGGTTAATTAAGGGA 58.212 39.130 0.00 0.00 0.00 4.20
5468 8790 6.349280 CCATACATGCATCGGTTAATTAAGGG 60.349 42.308 0.00 0.00 0.00 3.95
5469 8791 6.206634 ACCATACATGCATCGGTTAATTAAGG 59.793 38.462 0.00 0.00 0.00 2.69
5470 8792 7.202016 ACCATACATGCATCGGTTAATTAAG 57.798 36.000 0.00 0.00 0.00 1.85
5471 8793 7.575414 AACCATACATGCATCGGTTAATTAA 57.425 32.000 14.59 0.00 38.17 1.40
5472 8794 7.575414 AAACCATACATGCATCGGTTAATTA 57.425 32.000 15.89 0.00 39.00 1.40
5473 8795 6.463995 AAACCATACATGCATCGGTTAATT 57.536 33.333 15.89 3.08 39.00 1.40
5474 8796 6.463995 AAAACCATACATGCATCGGTTAAT 57.536 33.333 15.89 8.54 39.00 1.40
5475 8797 5.906113 AAAACCATACATGCATCGGTTAA 57.094 34.783 15.89 0.00 39.00 2.01
5476 8798 5.393569 CCAAAAACCATACATGCATCGGTTA 60.394 40.000 15.89 0.00 39.00 2.85
5477 8799 4.493547 CAAAAACCATACATGCATCGGTT 58.506 39.130 11.68 11.68 41.67 4.44
5478 8800 3.119173 CCAAAAACCATACATGCATCGGT 60.119 43.478 0.00 0.00 0.00 4.69
5479 8801 3.446799 CCAAAAACCATACATGCATCGG 58.553 45.455 0.00 0.00 0.00 4.18
5480 8802 3.119173 ACCCAAAAACCATACATGCATCG 60.119 43.478 0.00 0.00 0.00 3.84
5481 8803 4.432712 GACCCAAAAACCATACATGCATC 58.567 43.478 0.00 0.00 0.00 3.91
5482 8804 3.197549 GGACCCAAAAACCATACATGCAT 59.802 43.478 0.00 0.00 0.00 3.96
5483 8805 2.564947 GGACCCAAAAACCATACATGCA 59.435 45.455 0.00 0.00 0.00 3.96
5484 8806 2.564947 TGGACCCAAAAACCATACATGC 59.435 45.455 0.00 0.00 0.00 4.06
5485 8807 3.831911 ACTGGACCCAAAAACCATACATG 59.168 43.478 0.00 0.00 33.08 3.21
5486 8808 4.126520 ACTGGACCCAAAAACCATACAT 57.873 40.909 0.00 0.00 33.08 2.29
5487 8809 3.603965 ACTGGACCCAAAAACCATACA 57.396 42.857 0.00 0.00 33.08 2.29
5488 8810 4.262292 GGAAACTGGACCCAAAAACCATAC 60.262 45.833 0.00 0.00 33.08 2.39
5489 8811 3.898741 GGAAACTGGACCCAAAAACCATA 59.101 43.478 0.00 0.00 33.08 2.74
5490 8812 2.703536 GGAAACTGGACCCAAAAACCAT 59.296 45.455 0.00 0.00 33.08 3.55
5491 8813 2.112190 GGAAACTGGACCCAAAAACCA 58.888 47.619 0.00 0.00 0.00 3.67
5492 8814 1.414919 GGGAAACTGGACCCAAAAACC 59.585 52.381 0.00 0.00 44.96 3.27
5493 8815 2.902705 GGGAAACTGGACCCAAAAAC 57.097 50.000 0.00 0.00 44.96 2.43
5499 8821 4.275810 GGTTAATAAGGGAAACTGGACCC 58.724 47.826 0.00 0.00 45.88 4.46
5500 8822 3.943381 CGGTTAATAAGGGAAACTGGACC 59.057 47.826 0.00 0.00 0.00 4.46
5503 8825 3.943381 GTCCGGTTAATAAGGGAAACTGG 59.057 47.826 0.00 6.04 46.62 4.00
5504 8826 3.943381 GGTCCGGTTAATAAGGGAAACTG 59.057 47.826 0.00 0.00 0.00 3.16
5505 8827 3.588396 TGGTCCGGTTAATAAGGGAAACT 59.412 43.478 0.00 0.00 0.00 2.66
5506 8828 3.954200 TGGTCCGGTTAATAAGGGAAAC 58.046 45.455 0.00 0.00 0.00 2.78
5507 8829 4.043184 AGTTGGTCCGGTTAATAAGGGAAA 59.957 41.667 0.00 0.00 0.00 3.13
5508 8830 3.588396 AGTTGGTCCGGTTAATAAGGGAA 59.412 43.478 0.00 0.00 0.00 3.97
5509 8831 3.183801 AGTTGGTCCGGTTAATAAGGGA 58.816 45.455 0.00 0.00 0.00 4.20
5510 8832 3.199289 AGAGTTGGTCCGGTTAATAAGGG 59.801 47.826 0.00 0.00 0.00 3.95
5511 8833 4.161754 AGAGAGTTGGTCCGGTTAATAAGG 59.838 45.833 0.00 0.00 0.00 2.69
5512 8834 5.340439 AGAGAGTTGGTCCGGTTAATAAG 57.660 43.478 0.00 0.00 0.00 1.73
5513 8835 5.482878 AGAAGAGAGTTGGTCCGGTTAATAA 59.517 40.000 0.00 0.00 0.00 1.40
5514 8836 5.021458 AGAAGAGAGTTGGTCCGGTTAATA 58.979 41.667 0.00 0.00 0.00 0.98
5515 8837 3.838903 AGAAGAGAGTTGGTCCGGTTAAT 59.161 43.478 0.00 0.00 0.00 1.40
5516 8838 3.236896 AGAAGAGAGTTGGTCCGGTTAA 58.763 45.455 0.00 0.00 0.00 2.01
5517 8839 2.885616 AGAAGAGAGTTGGTCCGGTTA 58.114 47.619 0.00 0.00 0.00 2.85
5518 8840 1.718280 AGAAGAGAGTTGGTCCGGTT 58.282 50.000 0.00 0.00 0.00 4.44
5519 8841 1.619332 GAAGAAGAGAGTTGGTCCGGT 59.381 52.381 0.00 0.00 0.00 5.28
5520 8842 1.896465 AGAAGAAGAGAGTTGGTCCGG 59.104 52.381 0.00 0.00 0.00 5.14
5521 8843 4.993029 ATAGAAGAAGAGAGTTGGTCCG 57.007 45.455 0.00 0.00 0.00 4.79
5522 8844 6.183360 TGCATATAGAAGAAGAGAGTTGGTCC 60.183 42.308 0.00 0.00 0.00 4.46
5523 8845 6.810911 TGCATATAGAAGAAGAGAGTTGGTC 58.189 40.000 0.00 0.00 0.00 4.02
5524 8846 6.798427 TGCATATAGAAGAAGAGAGTTGGT 57.202 37.500 0.00 0.00 0.00 3.67
5525 8847 8.557864 CATTTGCATATAGAAGAAGAGAGTTGG 58.442 37.037 0.00 0.00 0.00 3.77
5526 8848 8.068977 GCATTTGCATATAGAAGAAGAGAGTTG 58.931 37.037 0.00 0.00 41.59 3.16
5527 8849 7.042187 CGCATTTGCATATAGAAGAAGAGAGTT 60.042 37.037 3.13 0.00 42.21 3.01
5528 8850 6.423302 CGCATTTGCATATAGAAGAAGAGAGT 59.577 38.462 3.13 0.00 42.21 3.24
5529 8851 6.128607 CCGCATTTGCATATAGAAGAAGAGAG 60.129 42.308 3.13 0.00 42.21 3.20
5530 8852 5.698089 CCGCATTTGCATATAGAAGAAGAGA 59.302 40.000 3.13 0.00 42.21 3.10
5531 8853 5.106791 CCCGCATTTGCATATAGAAGAAGAG 60.107 44.000 3.13 0.00 42.21 2.85
5532 8854 4.756642 CCCGCATTTGCATATAGAAGAAGA 59.243 41.667 3.13 0.00 42.21 2.87
5533 8855 4.756642 TCCCGCATTTGCATATAGAAGAAG 59.243 41.667 3.13 0.00 42.21 2.85
5534 8856 4.713553 TCCCGCATTTGCATATAGAAGAA 58.286 39.130 3.13 0.00 42.21 2.52
5535 8857 4.318332 CTCCCGCATTTGCATATAGAAGA 58.682 43.478 3.13 0.00 42.21 2.87
5536 8858 3.120060 GCTCCCGCATTTGCATATAGAAG 60.120 47.826 3.13 0.00 42.21 2.85
5537 8859 2.813754 GCTCCCGCATTTGCATATAGAA 59.186 45.455 3.13 0.00 42.21 2.10
5538 8860 2.038952 AGCTCCCGCATTTGCATATAGA 59.961 45.455 3.13 0.00 42.21 1.98
5539 8861 2.417933 GAGCTCCCGCATTTGCATATAG 59.582 50.000 0.87 0.00 42.21 1.31
5540 8862 2.426522 GAGCTCCCGCATTTGCATATA 58.573 47.619 0.87 0.00 42.21 0.86
5541 8863 1.242076 GAGCTCCCGCATTTGCATAT 58.758 50.000 0.87 0.00 42.21 1.78
5542 8864 0.819259 GGAGCTCCCGCATTTGCATA 60.819 55.000 23.19 0.00 42.21 3.14
5543 8865 2.123428 GGAGCTCCCGCATTTGCAT 61.123 57.895 23.19 0.00 42.21 3.96
5544 8866 2.751436 GGAGCTCCCGCATTTGCA 60.751 61.111 23.19 0.00 42.21 4.08
5558 8880 2.444706 TCATCAGAGGGCGGGGAG 60.445 66.667 0.00 0.00 0.00 4.30
5559 8881 2.444706 CTCATCAGAGGGCGGGGA 60.445 66.667 0.00 0.00 38.26 4.81
5567 8889 5.673337 TTTTTGACGAAACCTCATCAGAG 57.327 39.130 0.00 0.00 41.72 3.35
5586 8908 0.539986 TCGGCGGCCTCTATCTTTTT 59.460 50.000 18.34 0.00 0.00 1.94
5587 8909 0.539986 TTCGGCGGCCTCTATCTTTT 59.460 50.000 18.34 0.00 0.00 2.27
5588 8910 0.539986 TTTCGGCGGCCTCTATCTTT 59.460 50.000 18.34 0.00 0.00 2.52
5589 8911 0.539986 TTTTCGGCGGCCTCTATCTT 59.460 50.000 18.34 0.00 0.00 2.40
5590 8912 0.539986 TTTTTCGGCGGCCTCTATCT 59.460 50.000 18.34 0.00 0.00 1.98
5591 8913 0.656259 GTTTTTCGGCGGCCTCTATC 59.344 55.000 18.34 0.00 0.00 2.08
5592 8914 0.035820 TGTTTTTCGGCGGCCTCTAT 60.036 50.000 18.34 0.00 0.00 1.98
5593 8915 0.035820 ATGTTTTTCGGCGGCCTCTA 60.036 50.000 18.34 0.00 0.00 2.43
5594 8916 1.303317 ATGTTTTTCGGCGGCCTCT 60.303 52.632 18.34 0.00 0.00 3.69
5595 8917 1.154035 CATGTTTTTCGGCGGCCTC 60.154 57.895 18.34 0.00 0.00 4.70
5596 8918 2.635443 CCATGTTTTTCGGCGGCCT 61.635 57.895 18.34 0.00 0.00 5.19
5597 8919 2.126110 CCATGTTTTTCGGCGGCC 60.126 61.111 9.54 9.54 0.00 6.13
5598 8920 2.809174 GCCATGTTTTTCGGCGGC 60.809 61.111 7.21 0.00 35.79 6.53
5601 8923 0.109319 ATCACGCCATGTTTTTCGGC 60.109 50.000 0.00 0.00 42.64 5.54
5602 8924 3.425404 CTTATCACGCCATGTTTTTCGG 58.575 45.455 0.00 0.00 0.00 4.30
5603 8925 2.845967 GCTTATCACGCCATGTTTTTCG 59.154 45.455 0.00 0.00 0.00 3.46
5732 9054 6.374333 TGGTGCAATACAGAATCTCCTTTTAC 59.626 38.462 0.00 0.00 0.00 2.01
5792 9115 4.341487 TCCGAGAGAAAGGATGTGTAGAA 58.659 43.478 0.00 0.00 0.00 2.10
5956 9368 8.004344 CACAATTACTTAAAGAGTGAACGTCTG 58.996 37.037 0.00 0.00 39.48 3.51
5978 9391 1.333308 CAAACATGGTCTCGTGCACAA 59.667 47.619 18.64 0.00 33.32 3.33
6240 9663 3.453353 CCTCTTTATCCCCCTTTCACGTA 59.547 47.826 0.00 0.00 0.00 3.57
6246 9669 2.504585 GTCGACCTCTTTATCCCCCTTT 59.495 50.000 3.51 0.00 0.00 3.11
6252 9675 3.637229 TCATCCTGTCGACCTCTTTATCC 59.363 47.826 14.12 0.00 0.00 2.59
6343 9770 9.551734 CCTTTAGTACAGGTTTAGTACAAAGTT 57.448 33.333 17.04 0.73 43.24 2.66
6344 9771 8.708378 ACCTTTAGTACAGGTTTAGTACAAAGT 58.292 33.333 1.89 0.00 42.45 2.66
6345 9772 9.201127 GACCTTTAGTACAGGTTTAGTACAAAG 57.799 37.037 9.39 11.35 45.30 2.77
6346 9773 7.867403 CGACCTTTAGTACAGGTTTAGTACAAA 59.133 37.037 9.39 4.46 45.30 2.83
6347 9774 7.230510 TCGACCTTTAGTACAGGTTTAGTACAA 59.769 37.037 9.39 0.00 45.30 2.41
6348 9775 6.714810 TCGACCTTTAGTACAGGTTTAGTACA 59.285 38.462 9.39 0.00 45.30 2.90
6349 9776 7.024171 GTCGACCTTTAGTACAGGTTTAGTAC 58.976 42.308 9.39 0.00 45.30 2.73
6350 9777 6.714810 TGTCGACCTTTAGTACAGGTTTAGTA 59.285 38.462 14.12 0.00 45.30 1.82
6351 9778 5.536161 TGTCGACCTTTAGTACAGGTTTAGT 59.464 40.000 14.12 0.00 45.30 2.24
6352 9779 6.017400 TGTCGACCTTTAGTACAGGTTTAG 57.983 41.667 14.12 5.16 45.30 1.85
6355 9782 4.516365 CTGTCGACCTTTAGTACAGGTT 57.484 45.455 14.12 0.00 45.30 3.50
6358 9785 2.416972 GGCCTGTCGACCTTTAGTACAG 60.417 54.545 14.12 0.31 37.81 2.74
6363 9790 2.403252 AATGGCCTGTCGACCTTTAG 57.597 50.000 14.12 3.16 0.00 1.85
6365 9792 1.995376 AAAATGGCCTGTCGACCTTT 58.005 45.000 14.12 0.00 0.00 3.11
6367 9794 2.039879 ACTTAAAATGGCCTGTCGACCT 59.960 45.455 14.12 0.00 0.00 3.85
6368 9795 2.433436 ACTTAAAATGGCCTGTCGACC 58.567 47.619 14.12 0.00 0.00 4.79
6370 9797 3.602483 GGTACTTAAAATGGCCTGTCGA 58.398 45.455 3.32 0.00 0.00 4.20
6372 9799 3.340928 ACGGTACTTAAAATGGCCTGTC 58.659 45.455 3.32 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.