Multiple sequence alignment - TraesCS4A01G194600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G194600 chr4A 100.000 3584 0 0 1 3584 476347656 476344073 0.000000e+00 6619.0
1 TraesCS4A01G194600 chr4A 96.610 531 18 0 1 531 476393664 476393134 0.000000e+00 881.0
2 TraesCS4A01G194600 chr4A 96.045 531 21 0 1 531 476960345 476959815 0.000000e+00 865.0
3 TraesCS4A01G194600 chr4A 95.857 531 22 0 1 531 476968608 476968078 0.000000e+00 859.0
4 TraesCS4A01G194600 chr4A 95.677 532 23 0 1 532 88480903 88480372 0.000000e+00 856.0
5 TraesCS4A01G194600 chr4A 92.683 246 18 0 658 903 109428087 109427842 4.400000e-94 355.0
6 TraesCS4A01G194600 chr4D 95.772 2247 65 5 923 3163 100199450 100201672 0.000000e+00 3596.0
7 TraesCS4A01G194600 chr4D 94.382 178 5 1 3407 3584 100202789 100202961 5.900000e-68 268.0
8 TraesCS4A01G194600 chr4D 88.636 132 10 3 532 662 361409638 361409511 4.790000e-34 156.0
9 TraesCS4A01G194600 chr4D 98.667 75 1 0 3342 3416 100201708 100201782 2.240000e-27 134.0
10 TraesCS4A01G194600 chr4B 96.007 1653 65 1 923 2574 142430882 142432534 0.000000e+00 2686.0
11 TraesCS4A01G194600 chr4B 91.254 343 14 5 2630 2971 142432536 142432863 1.520000e-123 453.0
12 TraesCS4A01G194600 chr4B 93.528 309 11 5 3253 3558 142432951 142433253 5.460000e-123 451.0
13 TraesCS4A01G194600 chr1A 96.234 531 20 0 1 531 495832003 495832533 0.000000e+00 870.0
14 TraesCS4A01G194600 chr1A 95.857 531 22 0 1 531 545068415 545068945 0.000000e+00 859.0
15 TraesCS4A01G194600 chr1A 92.035 113 8 1 532 643 381189698 381189586 1.330000e-34 158.0
16 TraesCS4A01G194600 chr3A 95.857 531 22 0 1 531 397254790 397254260 0.000000e+00 859.0
17 TraesCS4A01G194600 chr3A 100.000 28 0 0 899 926 260497475 260497448 6.000000e-03 52.8
18 TraesCS4A01G194600 chr6A 95.849 530 22 0 1 530 77800859 77800330 0.000000e+00 857.0
19 TraesCS4A01G194600 chr6A 95.669 531 23 0 1 531 77851242 77850712 0.000000e+00 854.0
20 TraesCS4A01G194600 chr2B 93.145 248 14 3 657 903 235906877 235906632 9.460000e-96 361.0
21 TraesCS4A01G194600 chr7A 93.004 243 16 1 658 900 646128373 646128132 1.580000e-93 353.0
22 TraesCS4A01G194600 chr7A 92.623 244 18 0 659 902 563349201 563348958 5.690000e-93 351.0
23 TraesCS4A01G194600 chr7A 92.308 247 17 2 658 904 699150274 699150518 2.050000e-92 350.0
24 TraesCS4A01G194600 chr5A 93.004 243 16 1 658 900 7171058 7171299 1.580000e-93 353.0
25 TraesCS4A01G194600 chr5A 92.032 251 17 3 659 908 609286036 609286284 2.050000e-92 350.0
26 TraesCS4A01G194600 chr3B 93.004 243 16 1 659 901 497096334 497096575 1.580000e-93 353.0
27 TraesCS4A01G194600 chr2A 92.000 250 18 2 653 901 752282688 752282936 2.050000e-92 350.0
28 TraesCS4A01G194600 chr1B 91.379 116 9 1 530 644 476009427 476009542 1.330000e-34 158.0
29 TraesCS4A01G194600 chr7D 88.722 133 8 5 532 662 241609454 241609327 4.790000e-34 156.0
30 TraesCS4A01G194600 chr7D 89.362 47 4 1 3187 3233 580480863 580480908 1.390000e-04 58.4
31 TraesCS4A01G194600 chr7D 100.000 28 0 0 899 926 214039561 214039588 6.000000e-03 52.8
32 TraesCS4A01G194600 chr6D 88.722 133 8 5 532 662 217764112 217763985 4.790000e-34 156.0
33 TraesCS4A01G194600 chr6D 100.000 29 0 0 898 926 270710977 270711005 2.000000e-03 54.7
34 TraesCS4A01G194600 chr6D 100.000 28 0 0 899 926 270602035 270602062 6.000000e-03 52.8
35 TraesCS4A01G194600 chr5D 88.636 132 9 5 532 662 472783353 472783479 4.790000e-34 156.0
36 TraesCS4A01G194600 chr5D 100.000 29 0 0 3205 3233 354943600 354943628 2.000000e-03 54.7
37 TraesCS4A01G194600 chr5D 100.000 28 0 0 899 926 557136844 557136817 6.000000e-03 52.8
38 TraesCS4A01G194600 chr3D 88.636 132 10 4 532 662 304972432 304972559 4.790000e-34 156.0
39 TraesCS4A01G194600 chr3D 88.060 134 7 6 532 662 228777704 228777577 2.230000e-32 150.0
40 TraesCS4A01G194600 chr6B 87.879 132 11 4 532 662 212114122 212113995 2.230000e-32 150.0
41 TraesCS4A01G194600 chr6B 93.023 43 3 0 1517 1559 643436232 643436190 2.990000e-06 63.9
42 TraesCS4A01G194600 chr5B 100.000 29 0 0 898 926 408398141 408398169 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G194600 chr4A 476344073 476347656 3583 True 6619.000000 6619 100.000000 1 3584 1 chr4A.!!$R3 3583
1 TraesCS4A01G194600 chr4A 476393134 476393664 530 True 881.000000 881 96.610000 1 531 1 chr4A.!!$R4 530
2 TraesCS4A01G194600 chr4A 476959815 476960345 530 True 865.000000 865 96.045000 1 531 1 chr4A.!!$R5 530
3 TraesCS4A01G194600 chr4A 476968078 476968608 530 True 859.000000 859 95.857000 1 531 1 chr4A.!!$R6 530
4 TraesCS4A01G194600 chr4A 88480372 88480903 531 True 856.000000 856 95.677000 1 532 1 chr4A.!!$R1 531
5 TraesCS4A01G194600 chr4D 100199450 100202961 3511 False 1332.666667 3596 96.273667 923 3584 3 chr4D.!!$F1 2661
6 TraesCS4A01G194600 chr4B 142430882 142433253 2371 False 1196.666667 2686 93.596333 923 3558 3 chr4B.!!$F1 2635
7 TraesCS4A01G194600 chr1A 495832003 495832533 530 False 870.000000 870 96.234000 1 531 1 chr1A.!!$F1 530
8 TraesCS4A01G194600 chr1A 545068415 545068945 530 False 859.000000 859 95.857000 1 531 1 chr1A.!!$F2 530
9 TraesCS4A01G194600 chr3A 397254260 397254790 530 True 859.000000 859 95.857000 1 531 1 chr3A.!!$R2 530
10 TraesCS4A01G194600 chr6A 77800330 77800859 529 True 857.000000 857 95.849000 1 530 1 chr6A.!!$R1 529
11 TraesCS4A01G194600 chr6A 77850712 77851242 530 True 854.000000 854 95.669000 1 531 1 chr6A.!!$R2 530

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
690 691 0.040425 CCAAAATATAGTGCGCCCGC 60.040 55.0 4.18 5.6 42.35 6.13 F
819 820 0.105039 AATTTTTGTTCCCGCCGCAA 59.895 45.0 0.00 0.0 0.00 4.85 F
831 832 0.317854 CGCCGCAATCAGTCTCGATA 60.318 55.0 0.00 0.0 0.00 2.92 F
1844 1846 0.463295 CAGGACAATGGCATCGAGCT 60.463 55.0 0.00 0.0 44.79 4.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1737 1739 0.034756 TCCATGACACAACGTCCCTG 59.965 55.0 0.0 0.0 44.71 4.45 R
2157 2159 0.178995 TGCAGGCAATCAAGACACCA 60.179 50.0 0.0 0.0 0.00 4.17 R
2253 2255 1.378531 TCATGCACCCGTAATGCTTC 58.621 50.0 0.0 0.0 43.77 3.86 R
3074 3081 0.813821 GGGTAGGTAGACGTGGACAC 59.186 60.0 0.0 0.0 0.00 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 3.935203 GACGATCACCACTTGATGTCATT 59.065 43.478 0.00 0.00 45.67 2.57
28 29 4.633126 CGATCACCACTTGATGTCATTCTT 59.367 41.667 0.00 0.00 45.67 2.52
99 100 2.256117 AACCCCACAAAGAACTCTCG 57.744 50.000 0.00 0.00 0.00 4.04
195 196 4.609783 CGGTACTTCTTTTACGCTTTGTGG 60.610 45.833 0.00 0.00 0.00 4.17
201 202 3.314080 TCTTTTACGCTTTGTGGGTTGAG 59.686 43.478 0.00 0.00 42.13 3.02
240 241 8.190326 TCTTGACTTAGTCTTGATCAACCTTA 57.810 34.615 13.86 0.00 33.15 2.69
299 300 7.943079 TGAAGGTAAACATGAATGATCACAT 57.057 32.000 0.00 0.00 38.69 3.21
358 359 5.233083 ACTCTCACATGACCAATCTTTGA 57.767 39.130 0.00 0.00 0.00 2.69
465 466 8.773033 ATCCTTCAAATATAACTCAAGGCAAT 57.227 30.769 0.00 0.00 32.00 3.56
478 479 5.092554 TCAAGGCAATCGTTAGTCCATAA 57.907 39.130 0.00 0.00 0.00 1.90
532 533 1.237285 GCACCGCATGTCCTTTCACT 61.237 55.000 0.00 0.00 0.00 3.41
533 534 1.943968 GCACCGCATGTCCTTTCACTA 60.944 52.381 0.00 0.00 0.00 2.74
534 535 2.422597 CACCGCATGTCCTTTCACTAA 58.577 47.619 0.00 0.00 0.00 2.24
535 536 2.159627 CACCGCATGTCCTTTCACTAAC 59.840 50.000 0.00 0.00 0.00 2.34
536 537 1.737793 CCGCATGTCCTTTCACTAACC 59.262 52.381 0.00 0.00 0.00 2.85
537 538 1.737793 CGCATGTCCTTTCACTAACCC 59.262 52.381 0.00 0.00 0.00 4.11
538 539 2.615493 CGCATGTCCTTTCACTAACCCT 60.615 50.000 0.00 0.00 0.00 4.34
539 540 2.749621 GCATGTCCTTTCACTAACCCTG 59.250 50.000 0.00 0.00 0.00 4.45
540 541 2.561478 TGTCCTTTCACTAACCCTGC 57.439 50.000 0.00 0.00 0.00 4.85
541 542 1.073284 TGTCCTTTCACTAACCCTGCC 59.927 52.381 0.00 0.00 0.00 4.85
542 543 0.323629 TCCTTTCACTAACCCTGCCG 59.676 55.000 0.00 0.00 0.00 5.69
543 544 0.676782 CCTTTCACTAACCCTGCCGG 60.677 60.000 0.00 0.00 37.81 6.13
552 553 3.552594 ACCCTGCCGGTGTCTATAT 57.447 52.632 1.90 0.00 46.09 0.86
553 554 2.688902 ACCCTGCCGGTGTCTATATA 57.311 50.000 1.90 0.00 46.09 0.86
554 555 2.966915 ACCCTGCCGGTGTCTATATAA 58.033 47.619 1.90 0.00 46.09 0.98
555 556 3.311091 ACCCTGCCGGTGTCTATATAAA 58.689 45.455 1.90 0.00 46.09 1.40
556 557 3.908103 ACCCTGCCGGTGTCTATATAAAT 59.092 43.478 1.90 0.00 46.09 1.40
557 558 4.020485 ACCCTGCCGGTGTCTATATAAATC 60.020 45.833 1.90 0.00 46.09 2.17
558 559 4.174009 CCTGCCGGTGTCTATATAAATCG 58.826 47.826 1.90 0.00 0.00 3.34
559 560 4.174009 CTGCCGGTGTCTATATAAATCGG 58.826 47.826 1.90 6.95 39.26 4.18
560 561 3.056393 TGCCGGTGTCTATATAAATCGGG 60.056 47.826 1.90 5.43 37.07 5.14
561 562 3.677976 GCCGGTGTCTATATAAATCGGGG 60.678 52.174 1.90 0.00 37.07 5.73
562 563 3.118884 CCGGTGTCTATATAAATCGGGGG 60.119 52.174 0.00 0.00 33.47 5.40
563 564 3.512724 CGGTGTCTATATAAATCGGGGGT 59.487 47.826 0.00 0.00 0.00 4.95
564 565 4.020839 CGGTGTCTATATAAATCGGGGGTT 60.021 45.833 0.00 0.00 0.00 4.11
565 566 5.243207 GGTGTCTATATAAATCGGGGGTTG 58.757 45.833 0.00 0.00 0.00 3.77
566 567 5.221783 GGTGTCTATATAAATCGGGGGTTGT 60.222 44.000 0.00 0.00 0.00 3.32
567 568 6.014327 GGTGTCTATATAAATCGGGGGTTGTA 60.014 42.308 0.00 0.00 0.00 2.41
568 569 7.095270 GTGTCTATATAAATCGGGGGTTGTAG 58.905 42.308 0.00 0.00 0.00 2.74
569 570 6.783977 TGTCTATATAAATCGGGGGTTGTAGT 59.216 38.462 0.00 0.00 0.00 2.73
570 571 7.039504 TGTCTATATAAATCGGGGGTTGTAGTC 60.040 40.741 0.00 0.00 0.00 2.59
571 572 7.178097 GTCTATATAAATCGGGGGTTGTAGTCT 59.822 40.741 0.00 0.00 0.00 3.24
572 573 6.758806 ATATAAATCGGGGGTTGTAGTCTT 57.241 37.500 0.00 0.00 0.00 3.01
573 574 3.801307 AAATCGGGGGTTGTAGTCTTT 57.199 42.857 0.00 0.00 0.00 2.52
574 575 4.914177 AAATCGGGGGTTGTAGTCTTTA 57.086 40.909 0.00 0.00 0.00 1.85
575 576 3.900966 ATCGGGGGTTGTAGTCTTTAC 57.099 47.619 0.00 0.00 0.00 2.01
576 577 1.545582 TCGGGGGTTGTAGTCTTTACG 59.454 52.381 0.00 0.00 0.00 3.18
577 578 1.404583 CGGGGGTTGTAGTCTTTACGG 60.405 57.143 0.00 0.00 0.00 4.02
578 579 1.901833 GGGGGTTGTAGTCTTTACGGA 59.098 52.381 0.00 0.00 0.00 4.69
579 580 2.093816 GGGGGTTGTAGTCTTTACGGAG 60.094 54.545 0.00 0.00 0.00 4.63
580 581 2.827921 GGGGTTGTAGTCTTTACGGAGA 59.172 50.000 0.00 0.00 0.00 3.71
581 582 3.119209 GGGGTTGTAGTCTTTACGGAGAG 60.119 52.174 0.00 0.00 0.00 3.20
582 583 3.760684 GGGTTGTAGTCTTTACGGAGAGA 59.239 47.826 0.00 0.00 0.00 3.10
583 584 4.142425 GGGTTGTAGTCTTTACGGAGAGAG 60.142 50.000 0.00 0.00 0.00 3.20
584 585 4.142425 GGTTGTAGTCTTTACGGAGAGAGG 60.142 50.000 0.00 0.00 0.00 3.69
585 586 4.298103 TGTAGTCTTTACGGAGAGAGGT 57.702 45.455 0.00 0.00 0.00 3.85
586 587 5.426689 TGTAGTCTTTACGGAGAGAGGTA 57.573 43.478 0.00 0.00 0.00 3.08
587 588 5.999044 TGTAGTCTTTACGGAGAGAGGTAT 58.001 41.667 0.00 0.00 0.00 2.73
588 589 7.129457 TGTAGTCTTTACGGAGAGAGGTATA 57.871 40.000 0.00 0.00 0.00 1.47
589 590 7.743749 TGTAGTCTTTACGGAGAGAGGTATAT 58.256 38.462 0.00 0.00 0.00 0.86
590 591 7.877097 TGTAGTCTTTACGGAGAGAGGTATATC 59.123 40.741 0.00 0.00 0.00 1.63
591 592 6.839454 AGTCTTTACGGAGAGAGGTATATCA 58.161 40.000 0.00 0.00 0.00 2.15
592 593 7.463431 AGTCTTTACGGAGAGAGGTATATCAT 58.537 38.462 0.00 0.00 0.00 2.45
593 594 7.608761 AGTCTTTACGGAGAGAGGTATATCATC 59.391 40.741 0.00 0.00 0.00 2.92
594 595 7.390996 GTCTTTACGGAGAGAGGTATATCATCA 59.609 40.741 0.00 0.00 0.00 3.07
595 596 8.110271 TCTTTACGGAGAGAGGTATATCATCAT 58.890 37.037 0.00 0.00 0.00 2.45
596 597 7.867305 TTACGGAGAGAGGTATATCATCATC 57.133 40.000 0.00 0.00 0.00 2.92
597 598 6.073447 ACGGAGAGAGGTATATCATCATCT 57.927 41.667 0.00 0.00 0.00 2.90
598 599 6.119536 ACGGAGAGAGGTATATCATCATCTC 58.880 44.000 8.23 8.23 40.37 2.75
599 600 6.118852 CGGAGAGAGGTATATCATCATCTCA 58.881 44.000 14.71 0.00 41.82 3.27
600 601 6.772233 CGGAGAGAGGTATATCATCATCTCAT 59.228 42.308 14.71 5.25 41.82 2.90
601 602 7.041167 CGGAGAGAGGTATATCATCATCTCATC 60.041 44.444 14.71 10.66 41.82 2.92
602 603 7.779326 GGAGAGAGGTATATCATCATCTCATCA 59.221 40.741 14.71 0.00 41.82 3.07
603 604 8.523915 AGAGAGGTATATCATCATCTCATCAC 57.476 38.462 14.71 0.00 41.82 3.06
604 605 7.560991 AGAGAGGTATATCATCATCTCATCACC 59.439 40.741 14.71 0.00 41.82 4.02
605 606 7.420856 AGAGGTATATCATCATCTCATCACCT 58.579 38.462 0.00 0.00 35.43 4.00
606 607 7.900246 AGAGGTATATCATCATCTCATCACCTT 59.100 37.037 0.00 0.00 32.96 3.50
607 608 9.194972 GAGGTATATCATCATCTCATCACCTTA 57.805 37.037 0.00 0.00 32.96 2.69
608 609 9.199645 AGGTATATCATCATCTCATCACCTTAG 57.800 37.037 0.00 0.00 28.36 2.18
609 610 8.420222 GGTATATCATCATCTCATCACCTTAGG 58.580 40.741 0.00 0.00 0.00 2.69
610 611 5.758790 ATCATCATCTCATCACCTTAGGG 57.241 43.478 2.32 0.00 38.88 3.53
612 613 4.971282 TCATCATCTCATCACCTTAGGGTT 59.029 41.667 2.32 0.00 44.73 4.11
613 614 5.429762 TCATCATCTCATCACCTTAGGGTTT 59.570 40.000 2.32 0.00 44.73 3.27
614 615 6.615316 TCATCATCTCATCACCTTAGGGTTTA 59.385 38.462 2.32 0.00 44.73 2.01
615 616 6.485830 TCATCTCATCACCTTAGGGTTTAG 57.514 41.667 2.32 0.00 44.73 1.85
616 617 4.755266 TCTCATCACCTTAGGGTTTAGC 57.245 45.455 2.32 0.00 44.73 3.09
617 618 4.362677 TCTCATCACCTTAGGGTTTAGCT 58.637 43.478 2.32 0.00 44.73 3.32
618 619 4.406003 TCTCATCACCTTAGGGTTTAGCTC 59.594 45.833 2.32 0.00 44.73 4.09
619 620 4.101114 TCATCACCTTAGGGTTTAGCTCA 58.899 43.478 2.32 0.00 44.73 4.26
620 621 4.721776 TCATCACCTTAGGGTTTAGCTCAT 59.278 41.667 2.32 0.00 44.73 2.90
621 622 4.487714 TCACCTTAGGGTTTAGCTCATG 57.512 45.455 2.32 0.00 44.73 3.07
622 623 2.945668 CACCTTAGGGTTTAGCTCATGC 59.054 50.000 2.32 0.00 44.73 4.06
624 625 3.370953 ACCTTAGGGTTTAGCTCATGCTG 60.371 47.826 2.32 0.00 46.43 4.41
625 626 5.612736 ACCTTAGGGTTTAGCTCATGCTGA 61.613 45.833 2.32 0.00 46.43 4.26
626 627 6.874811 ACCTTAGGGTTTAGCTCATGCTGAT 61.875 44.000 2.32 0.00 46.43 2.90
627 628 8.594350 ACCTTAGGGTTTAGCTCATGCTGATC 62.594 46.154 2.32 0.00 46.43 2.92
633 634 3.198187 GCTCATGCTGATCTCGAGG 57.802 57.895 13.56 0.00 36.03 4.63
634 635 0.388659 GCTCATGCTGATCTCGAGGT 59.611 55.000 13.56 4.76 36.03 3.85
635 636 1.611006 GCTCATGCTGATCTCGAGGTA 59.389 52.381 13.56 0.00 36.03 3.08
636 637 2.351641 GCTCATGCTGATCTCGAGGTAG 60.352 54.545 13.56 9.59 36.03 3.18
637 638 3.145286 CTCATGCTGATCTCGAGGTAGA 58.855 50.000 13.56 0.00 0.00 2.59
638 639 2.881513 TCATGCTGATCTCGAGGTAGAC 59.118 50.000 13.56 0.00 0.00 2.59
639 640 1.681538 TGCTGATCTCGAGGTAGACC 58.318 55.000 13.56 0.00 0.00 3.85
655 656 5.833406 GTAGACCTACCTACTCTGGAAAC 57.167 47.826 0.00 0.00 36.85 2.78
656 657 3.710724 AGACCTACCTACTCTGGAAACC 58.289 50.000 0.00 0.00 0.00 3.27
657 658 3.077088 AGACCTACCTACTCTGGAAACCA 59.923 47.826 0.00 0.00 0.00 3.67
658 659 4.031611 GACCTACCTACTCTGGAAACCAT 58.968 47.826 0.00 0.00 30.82 3.55
659 660 5.043582 AGACCTACCTACTCTGGAAACCATA 60.044 44.000 0.00 0.00 30.82 2.74
660 661 4.961099 ACCTACCTACTCTGGAAACCATAC 59.039 45.833 0.00 0.00 30.82 2.39
661 662 5.209659 CCTACCTACTCTGGAAACCATACT 58.790 45.833 0.00 0.00 30.82 2.12
662 663 5.302313 CCTACCTACTCTGGAAACCATACTC 59.698 48.000 0.00 0.00 30.82 2.59
663 664 4.031611 ACCTACTCTGGAAACCATACTCC 58.968 47.826 0.00 0.00 30.82 3.85
664 665 3.388350 CCTACTCTGGAAACCATACTCCC 59.612 52.174 0.00 0.00 30.82 4.30
665 666 3.207044 ACTCTGGAAACCATACTCCCT 57.793 47.619 0.00 0.00 30.82 4.20
666 667 3.532102 ACTCTGGAAACCATACTCCCTT 58.468 45.455 0.00 0.00 30.82 3.95
667 668 3.519913 ACTCTGGAAACCATACTCCCTTC 59.480 47.826 0.00 0.00 30.82 3.46
668 669 3.519510 CTCTGGAAACCATACTCCCTTCA 59.480 47.826 0.00 0.00 30.82 3.02
669 670 4.111577 TCTGGAAACCATACTCCCTTCAT 58.888 43.478 0.00 0.00 30.82 2.57
670 671 4.540099 TCTGGAAACCATACTCCCTTCATT 59.460 41.667 0.00 0.00 30.82 2.57
671 672 4.855340 TGGAAACCATACTCCCTTCATTC 58.145 43.478 0.00 0.00 0.00 2.67
672 673 4.207955 GGAAACCATACTCCCTTCATTCC 58.792 47.826 0.00 0.00 0.00 3.01
673 674 4.325030 GGAAACCATACTCCCTTCATTCCA 60.325 45.833 0.00 0.00 35.14 3.53
674 675 4.946160 AACCATACTCCCTTCATTCCAA 57.054 40.909 0.00 0.00 0.00 3.53
675 676 4.946160 ACCATACTCCCTTCATTCCAAA 57.054 40.909 0.00 0.00 0.00 3.28
676 677 5.269554 ACCATACTCCCTTCATTCCAAAA 57.730 39.130 0.00 0.00 0.00 2.44
677 678 5.842339 ACCATACTCCCTTCATTCCAAAAT 58.158 37.500 0.00 0.00 0.00 1.82
678 679 6.980577 ACCATACTCCCTTCATTCCAAAATA 58.019 36.000 0.00 0.00 0.00 1.40
679 680 7.595488 ACCATACTCCCTTCATTCCAAAATAT 58.405 34.615 0.00 0.00 0.00 1.28
680 681 8.732854 ACCATACTCCCTTCATTCCAAAATATA 58.267 33.333 0.00 0.00 0.00 0.86
681 682 9.236006 CCATACTCCCTTCATTCCAAAATATAG 57.764 37.037 0.00 0.00 0.00 1.31
682 683 9.799106 CATACTCCCTTCATTCCAAAATATAGT 57.201 33.333 0.00 0.00 0.00 2.12
683 684 9.799106 ATACTCCCTTCATTCCAAAATATAGTG 57.201 33.333 0.00 0.00 0.00 2.74
684 685 6.547510 ACTCCCTTCATTCCAAAATATAGTGC 59.452 38.462 0.00 0.00 0.00 4.40
685 686 5.530915 TCCCTTCATTCCAAAATATAGTGCG 59.469 40.000 0.00 0.00 0.00 5.34
686 687 5.215160 CCTTCATTCCAAAATATAGTGCGC 58.785 41.667 0.00 0.00 0.00 6.09
687 688 4.829064 TCATTCCAAAATATAGTGCGCC 57.171 40.909 4.18 0.00 0.00 6.53
688 689 3.568007 TCATTCCAAAATATAGTGCGCCC 59.432 43.478 4.18 0.00 0.00 6.13
689 690 1.588674 TCCAAAATATAGTGCGCCCG 58.411 50.000 4.18 0.00 0.00 6.13
690 691 0.040425 CCAAAATATAGTGCGCCCGC 60.040 55.000 4.18 5.60 42.35 6.13
691 692 0.384230 CAAAATATAGTGCGCCCGCG 60.384 55.000 4.18 4.36 45.51 6.46
705 706 2.126463 CGCGCTTCTCGAGGTTCA 60.126 61.111 13.56 0.00 41.67 3.18
706 707 1.733041 CGCGCTTCTCGAGGTTCAA 60.733 57.895 13.56 0.00 41.67 2.69
707 708 1.782181 GCGCTTCTCGAGGTTCAAC 59.218 57.895 13.56 0.00 41.67 3.18
708 709 0.667792 GCGCTTCTCGAGGTTCAACT 60.668 55.000 13.56 0.00 41.67 3.16
709 710 1.784525 CGCTTCTCGAGGTTCAACTT 58.215 50.000 13.56 0.00 41.67 2.66
710 711 2.135933 CGCTTCTCGAGGTTCAACTTT 58.864 47.619 13.56 0.00 41.67 2.66
711 712 2.096713 CGCTTCTCGAGGTTCAACTTTG 60.097 50.000 13.56 0.00 41.67 2.77
712 713 3.131396 GCTTCTCGAGGTTCAACTTTGA 58.869 45.455 13.56 0.00 34.92 2.69
713 714 3.059529 GCTTCTCGAGGTTCAACTTTGAC 60.060 47.826 13.56 0.00 36.83 3.18
714 715 3.107642 TCTCGAGGTTCAACTTTGACC 57.892 47.619 13.56 0.00 36.83 4.02
715 716 2.432874 TCTCGAGGTTCAACTTTGACCA 59.567 45.455 13.56 0.00 36.83 4.02
716 717 3.071023 TCTCGAGGTTCAACTTTGACCAT 59.929 43.478 13.56 0.00 36.83 3.55
717 718 3.399330 TCGAGGTTCAACTTTGACCATC 58.601 45.455 11.01 3.23 36.83 3.51
718 719 3.138304 CGAGGTTCAACTTTGACCATCA 58.862 45.455 2.75 0.00 36.83 3.07
719 720 3.563808 CGAGGTTCAACTTTGACCATCAA 59.436 43.478 2.75 0.00 36.83 2.57
720 721 4.216257 CGAGGTTCAACTTTGACCATCAAT 59.784 41.667 2.75 0.00 36.11 2.57
721 722 5.278463 CGAGGTTCAACTTTGACCATCAATT 60.278 40.000 2.75 0.00 36.11 2.32
722 723 6.484364 AGGTTCAACTTTGACCATCAATTT 57.516 33.333 11.01 0.00 36.11 1.82
723 724 7.521423 CGAGGTTCAACTTTGACCATCAATTTA 60.521 37.037 2.75 0.00 36.11 1.40
724 725 8.017418 AGGTTCAACTTTGACCATCAATTTAA 57.983 30.769 11.01 0.00 36.11 1.52
725 726 7.926018 AGGTTCAACTTTGACCATCAATTTAAC 59.074 33.333 11.01 0.00 36.11 2.01
726 727 7.170828 GGTTCAACTTTGACCATCAATTTAACC 59.829 37.037 5.74 5.74 36.11 2.85
727 728 7.353414 TCAACTTTGACCATCAATTTAACCA 57.647 32.000 0.00 0.00 36.11 3.67
728 729 7.786030 TCAACTTTGACCATCAATTTAACCAA 58.214 30.769 0.00 0.00 36.11 3.67
729 730 7.708752 TCAACTTTGACCATCAATTTAACCAAC 59.291 33.333 0.00 0.00 36.11 3.77
730 731 6.212955 ACTTTGACCATCAATTTAACCAACG 58.787 36.000 0.00 0.00 36.11 4.10
731 732 6.039941 ACTTTGACCATCAATTTAACCAACGA 59.960 34.615 0.00 0.00 36.11 3.85
732 733 5.621197 TGACCATCAATTTAACCAACGAG 57.379 39.130 0.00 0.00 0.00 4.18
733 734 5.309638 TGACCATCAATTTAACCAACGAGA 58.690 37.500 0.00 0.00 0.00 4.04
734 735 5.180492 TGACCATCAATTTAACCAACGAGAC 59.820 40.000 0.00 0.00 0.00 3.36
735 736 4.457949 ACCATCAATTTAACCAACGAGACC 59.542 41.667 0.00 0.00 0.00 3.85
736 737 4.457603 CCATCAATTTAACCAACGAGACCA 59.542 41.667 0.00 0.00 0.00 4.02
737 738 5.048364 CCATCAATTTAACCAACGAGACCAA 60.048 40.000 0.00 0.00 0.00 3.67
738 739 5.427036 TCAATTTAACCAACGAGACCAAC 57.573 39.130 0.00 0.00 0.00 3.77
739 740 5.127491 TCAATTTAACCAACGAGACCAACT 58.873 37.500 0.00 0.00 0.00 3.16
740 741 5.008217 TCAATTTAACCAACGAGACCAACTG 59.992 40.000 0.00 0.00 0.00 3.16
741 742 1.873698 TAACCAACGAGACCAACTGC 58.126 50.000 0.00 0.00 0.00 4.40
742 743 1.157870 AACCAACGAGACCAACTGCG 61.158 55.000 0.00 0.00 0.00 5.18
743 744 2.317609 CCAACGAGACCAACTGCGG 61.318 63.158 0.00 0.00 0.00 5.69
744 745 2.665185 AACGAGACCAACTGCGGC 60.665 61.111 0.00 0.00 0.00 6.53
751 752 4.697756 CCAACTGCGGCGGGAGAA 62.698 66.667 19.55 0.00 35.29 2.87
752 753 2.668212 CAACTGCGGCGGGAGAAA 60.668 61.111 19.55 0.00 35.29 2.52
753 754 2.112297 AACTGCGGCGGGAGAAAA 59.888 55.556 19.55 0.00 35.29 2.29
754 755 1.527380 AACTGCGGCGGGAGAAAAA 60.527 52.632 19.55 0.00 35.29 1.94
786 787 6.438327 AATTGAAAACTTCTTTCGAATGCG 57.562 33.333 0.00 0.00 39.35 4.73
787 788 4.804608 TGAAAACTTCTTTCGAATGCGA 57.195 36.364 0.00 0.00 46.33 5.10
802 803 7.889589 TCGAATGCGAATTCACTGATATAAT 57.110 32.000 16.41 0.00 44.78 1.28
803 804 8.310406 TCGAATGCGAATTCACTGATATAATT 57.690 30.769 16.41 0.00 44.78 1.40
804 805 8.773645 TCGAATGCGAATTCACTGATATAATTT 58.226 29.630 16.41 0.00 44.78 1.82
805 806 9.385902 CGAATGCGAATTCACTGATATAATTTT 57.614 29.630 16.41 0.00 40.82 1.82
809 810 9.853555 TGCGAATTCACTGATATAATTTTTGTT 57.146 25.926 6.22 0.00 0.00 2.83
813 814 9.801873 AATTCACTGATATAATTTTTGTTCCCG 57.198 29.630 0.00 0.00 0.00 5.14
814 815 6.791303 TCACTGATATAATTTTTGTTCCCGC 58.209 36.000 0.00 0.00 0.00 6.13
815 816 5.977129 CACTGATATAATTTTTGTTCCCGCC 59.023 40.000 0.00 0.00 0.00 6.13
816 817 5.176407 TGATATAATTTTTGTTCCCGCCG 57.824 39.130 0.00 0.00 0.00 6.46
817 818 2.287393 ATAATTTTTGTTCCCGCCGC 57.713 45.000 0.00 0.00 0.00 6.53
818 819 0.959553 TAATTTTTGTTCCCGCCGCA 59.040 45.000 0.00 0.00 0.00 5.69
819 820 0.105039 AATTTTTGTTCCCGCCGCAA 59.895 45.000 0.00 0.00 0.00 4.85
820 821 0.320050 ATTTTTGTTCCCGCCGCAAT 59.680 45.000 0.00 0.00 0.00 3.56
821 822 0.319125 TTTTTGTTCCCGCCGCAATC 60.319 50.000 0.00 0.00 0.00 2.67
822 823 1.456196 TTTTGTTCCCGCCGCAATCA 61.456 50.000 0.00 0.00 0.00 2.57
823 824 1.861542 TTTGTTCCCGCCGCAATCAG 61.862 55.000 0.00 0.00 0.00 2.90
824 825 2.746277 GTTCCCGCCGCAATCAGT 60.746 61.111 0.00 0.00 0.00 3.41
825 826 2.435938 TTCCCGCCGCAATCAGTC 60.436 61.111 0.00 0.00 0.00 3.51
826 827 2.954684 TTCCCGCCGCAATCAGTCT 61.955 57.895 0.00 0.00 0.00 3.24
827 828 2.852495 TTCCCGCCGCAATCAGTCTC 62.852 60.000 0.00 0.00 0.00 3.36
828 829 3.257561 CCGCCGCAATCAGTCTCG 61.258 66.667 0.00 0.00 0.00 4.04
829 830 2.202610 CGCCGCAATCAGTCTCGA 60.203 61.111 0.00 0.00 0.00 4.04
830 831 1.589993 CGCCGCAATCAGTCTCGAT 60.590 57.895 0.00 0.00 0.00 3.59
831 832 0.317854 CGCCGCAATCAGTCTCGATA 60.318 55.000 0.00 0.00 0.00 2.92
832 833 1.413382 GCCGCAATCAGTCTCGATAG 58.587 55.000 0.00 0.00 0.00 2.08
833 834 1.269309 GCCGCAATCAGTCTCGATAGT 60.269 52.381 0.00 0.00 37.40 2.12
834 835 2.799917 GCCGCAATCAGTCTCGATAGTT 60.800 50.000 0.00 0.00 37.40 2.24
835 836 3.550233 GCCGCAATCAGTCTCGATAGTTA 60.550 47.826 0.00 0.00 37.40 2.24
836 837 4.607955 CCGCAATCAGTCTCGATAGTTAA 58.392 43.478 0.00 0.00 37.40 2.01
837 838 5.041287 CCGCAATCAGTCTCGATAGTTAAA 58.959 41.667 0.00 0.00 37.40 1.52
838 839 5.692204 CCGCAATCAGTCTCGATAGTTAAAT 59.308 40.000 0.00 0.00 37.40 1.40
839 840 6.201044 CCGCAATCAGTCTCGATAGTTAAATT 59.799 38.462 0.00 0.00 37.40 1.82
840 841 7.254455 CCGCAATCAGTCTCGATAGTTAAATTT 60.254 37.037 0.00 0.00 37.40 1.82
841 842 8.752254 CGCAATCAGTCTCGATAGTTAAATTTA 58.248 33.333 0.00 0.00 37.40 1.40
842 843 9.851043 GCAATCAGTCTCGATAGTTAAATTTAC 57.149 33.333 0.00 0.00 37.40 2.01
844 845 8.798748 ATCAGTCTCGATAGTTAAATTTACGG 57.201 34.615 0.00 0.00 37.40 4.02
845 846 7.765307 TCAGTCTCGATAGTTAAATTTACGGT 58.235 34.615 0.00 0.00 37.40 4.83
846 847 7.912250 TCAGTCTCGATAGTTAAATTTACGGTC 59.088 37.037 0.00 0.00 37.40 4.79
847 848 7.699391 CAGTCTCGATAGTTAAATTTACGGTCA 59.301 37.037 0.00 0.00 37.40 4.02
848 849 8.246180 AGTCTCGATAGTTAAATTTACGGTCAA 58.754 33.333 0.00 0.00 37.40 3.18
849 850 8.863049 GTCTCGATAGTTAAATTTACGGTCAAA 58.137 33.333 0.00 0.00 37.40 2.69
850 851 9.079833 TCTCGATAGTTAAATTTACGGTCAAAG 57.920 33.333 0.00 0.00 37.40 2.77
851 852 8.761575 TCGATAGTTAAATTTACGGTCAAAGT 57.238 30.769 0.00 0.00 37.40 2.66
852 853 9.206870 TCGATAGTTAAATTTACGGTCAAAGTT 57.793 29.630 0.00 0.00 37.40 2.66
853 854 9.257865 CGATAGTTAAATTTACGGTCAAAGTTG 57.742 33.333 0.00 0.00 29.44 3.16
857 858 7.646526 AGTTAAATTTACGGTCAAAGTTGAAGC 59.353 33.333 0.00 0.00 39.21 3.86
858 859 5.508200 AATTTACGGTCAAAGTTGAAGCA 57.492 34.783 0.00 0.00 39.21 3.91
859 860 5.705609 ATTTACGGTCAAAGTTGAAGCAT 57.294 34.783 0.00 0.00 39.21 3.79
860 861 6.811253 ATTTACGGTCAAAGTTGAAGCATA 57.189 33.333 0.00 0.00 39.21 3.14
861 862 6.811253 TTTACGGTCAAAGTTGAAGCATAT 57.189 33.333 0.00 0.00 39.21 1.78
862 863 4.685169 ACGGTCAAAGTTGAAGCATATG 57.315 40.909 0.00 0.00 39.21 1.78
863 864 3.440173 ACGGTCAAAGTTGAAGCATATGG 59.560 43.478 4.56 0.00 39.21 2.74
864 865 3.689161 CGGTCAAAGTTGAAGCATATGGA 59.311 43.478 4.56 0.00 39.21 3.41
865 866 4.336433 CGGTCAAAGTTGAAGCATATGGAT 59.664 41.667 4.56 0.00 39.21 3.41
866 867 5.527214 CGGTCAAAGTTGAAGCATATGGATA 59.473 40.000 4.56 0.00 39.21 2.59
867 868 6.293081 CGGTCAAAGTTGAAGCATATGGATAG 60.293 42.308 4.56 0.00 39.21 2.08
868 869 6.767902 GGTCAAAGTTGAAGCATATGGATAGA 59.232 38.462 4.56 0.00 39.21 1.98
869 870 7.041508 GGTCAAAGTTGAAGCATATGGATAGAG 60.042 40.741 4.56 0.00 39.21 2.43
870 871 6.994496 TCAAAGTTGAAGCATATGGATAGAGG 59.006 38.462 4.56 0.00 33.55 3.69
871 872 6.753913 AAGTTGAAGCATATGGATAGAGGA 57.246 37.500 4.56 0.00 0.00 3.71
872 873 6.753913 AGTTGAAGCATATGGATAGAGGAA 57.246 37.500 4.56 0.00 0.00 3.36
873 874 6.767456 AGTTGAAGCATATGGATAGAGGAAG 58.233 40.000 4.56 0.00 0.00 3.46
874 875 5.157940 TGAAGCATATGGATAGAGGAAGC 57.842 43.478 4.56 0.00 0.00 3.86
875 876 4.594491 TGAAGCATATGGATAGAGGAAGCA 59.406 41.667 4.56 0.00 0.00 3.91
876 877 4.550076 AGCATATGGATAGAGGAAGCAC 57.450 45.455 4.56 0.00 0.00 4.40
877 878 4.166539 AGCATATGGATAGAGGAAGCACT 58.833 43.478 4.56 0.00 0.00 4.40
878 879 5.336945 AGCATATGGATAGAGGAAGCACTA 58.663 41.667 4.56 0.00 0.00 2.74
879 880 5.186797 AGCATATGGATAGAGGAAGCACTAC 59.813 44.000 4.56 0.00 0.00 2.73
880 881 5.047021 GCATATGGATAGAGGAAGCACTACA 60.047 44.000 4.56 0.00 0.00 2.74
881 882 6.351711 GCATATGGATAGAGGAAGCACTACAT 60.352 42.308 4.56 0.00 0.00 2.29
882 883 7.619050 CATATGGATAGAGGAAGCACTACATT 58.381 38.462 0.00 0.00 0.00 2.71
883 884 8.753133 CATATGGATAGAGGAAGCACTACATTA 58.247 37.037 0.00 0.00 0.00 1.90
884 885 7.805083 ATGGATAGAGGAAGCACTACATTAT 57.195 36.000 0.00 0.00 0.00 1.28
885 886 8.901472 ATGGATAGAGGAAGCACTACATTATA 57.099 34.615 0.00 0.00 0.00 0.98
886 887 8.354711 TGGATAGAGGAAGCACTACATTATAG 57.645 38.462 0.00 0.00 0.00 1.31
887 888 8.170730 TGGATAGAGGAAGCACTACATTATAGA 58.829 37.037 0.00 0.00 0.00 1.98
888 889 9.026121 GGATAGAGGAAGCACTACATTATAGAA 57.974 37.037 0.00 0.00 0.00 2.10
891 892 7.675062 AGAGGAAGCACTACATTATAGAATGG 58.325 38.462 14.27 0.49 45.83 3.16
892 893 7.510685 AGAGGAAGCACTACATTATAGAATGGA 59.489 37.037 14.27 4.91 45.83 3.41
893 894 8.034313 AGGAAGCACTACATTATAGAATGGAA 57.966 34.615 14.27 1.76 45.83 3.53
894 895 8.153550 AGGAAGCACTACATTATAGAATGGAAG 58.846 37.037 14.27 12.51 45.83 3.46
895 896 7.389053 GGAAGCACTACATTATAGAATGGAAGG 59.611 40.741 14.27 2.34 45.83 3.46
896 897 6.773638 AGCACTACATTATAGAATGGAAGGG 58.226 40.000 14.27 12.35 45.83 3.95
897 898 5.940470 GCACTACATTATAGAATGGAAGGGG 59.060 44.000 14.27 8.79 45.83 4.79
898 899 6.465894 GCACTACATTATAGAATGGAAGGGGT 60.466 42.308 14.27 0.00 45.83 4.95
899 900 7.256547 GCACTACATTATAGAATGGAAGGGGTA 60.257 40.741 14.27 0.00 45.83 3.69
900 901 8.095169 CACTACATTATAGAATGGAAGGGGTAC 58.905 40.741 14.27 0.00 45.83 3.34
901 902 8.017251 ACTACATTATAGAATGGAAGGGGTACT 58.983 37.037 14.27 0.00 45.83 2.73
902 903 9.543231 CTACATTATAGAATGGAAGGGGTACTA 57.457 37.037 14.27 0.00 45.83 1.82
903 904 8.990693 ACATTATAGAATGGAAGGGGTACTAT 57.009 34.615 14.27 0.00 45.83 2.12
908 909 6.936968 AGAATGGAAGGGGTACTATACATC 57.063 41.667 0.00 0.00 0.00 3.06
909 910 5.785940 AGAATGGAAGGGGTACTATACATCC 59.214 44.000 0.00 0.00 0.00 3.51
910 911 4.562934 TGGAAGGGGTACTATACATCCA 57.437 45.455 0.00 0.00 0.00 3.41
911 912 4.898268 TGGAAGGGGTACTATACATCCAA 58.102 43.478 0.00 0.00 0.00 3.53
912 913 5.482580 TGGAAGGGGTACTATACATCCAAT 58.517 41.667 0.00 0.00 0.00 3.16
913 914 6.636003 TGGAAGGGGTACTATACATCCAATA 58.364 40.000 0.00 0.00 0.00 1.90
914 915 7.260891 TGGAAGGGGTACTATACATCCAATAT 58.739 38.462 0.00 0.00 0.00 1.28
915 916 8.411421 TGGAAGGGGTACTATACATCCAATATA 58.589 37.037 0.00 0.00 0.00 0.86
916 917 9.275572 GGAAGGGGTACTATACATCCAATATAA 57.724 37.037 0.00 0.00 0.00 0.98
961 963 4.803908 GGCCCACCTGCAGCTACC 62.804 72.222 8.66 0.71 0.00 3.18
1003 1005 1.379044 GGTGGACCTGGCTTCATGG 60.379 63.158 0.00 0.00 0.00 3.66
1167 1169 3.151022 CTCTCCCGACTCCCTGCC 61.151 72.222 0.00 0.00 0.00 4.85
1220 1222 4.689549 TCCGGGCGTTCTCTCCCA 62.690 66.667 0.00 0.00 42.75 4.37
1237 1239 2.120718 AGTCCCTCTTCTGCCCGT 59.879 61.111 0.00 0.00 0.00 5.28
1362 1364 3.204827 CTCAAATCCTGCGCCCGG 61.205 66.667 4.18 5.57 0.00 5.73
1426 1428 2.911926 GCCTTCAAGGGGCTGGAGT 61.912 63.158 5.33 0.00 45.57 3.85
1497 1499 2.505498 CGCGCTCGTGTCCATGTAC 61.505 63.158 5.56 0.00 0.00 2.90
1698 1700 1.153086 GAATGCGAGGGCTGGTGAT 60.153 57.895 0.00 0.00 40.82 3.06
1731 1733 0.526524 CGCGGGTCTTCAGTGAGATC 60.527 60.000 0.00 0.00 0.00 2.75
1737 1739 2.167487 GGTCTTCAGTGAGATCCCTGAC 59.833 54.545 6.80 0.00 37.43 3.51
1844 1846 0.463295 CAGGACAATGGCATCGAGCT 60.463 55.000 0.00 0.00 44.79 4.09
1995 1997 5.017484 TCGTTGATATGTATGCGAAATGC 57.983 39.130 0.00 0.00 46.70 3.56
2015 2017 0.685458 GGCAGATTGGACCTTGCCAT 60.685 55.000 18.73 0.00 41.63 4.40
2157 2159 4.597004 AGCCTGATCATGTCACATTTCTT 58.403 39.130 0.00 0.00 32.22 2.52
2253 2255 2.437200 ACAAAATTGTGCCGGATGTG 57.563 45.000 5.05 0.00 40.49 3.21
2445 2447 2.203167 CATGAGCTGATGCCCGCT 60.203 61.111 0.00 0.00 40.80 5.52
2578 2580 3.621794 GCACACAGTCAAGTTGATGTTC 58.378 45.455 9.18 0.52 0.00 3.18
2581 2583 2.872245 CACAGTCAAGTTGATGTTCCGT 59.128 45.455 9.18 0.00 0.00 4.69
2609 2611 6.771188 AATATTTAGAGCGAAGAATGACCG 57.229 37.500 0.00 0.00 0.00 4.79
2611 2613 3.861276 TTAGAGCGAAGAATGACCGAA 57.139 42.857 0.00 0.00 0.00 4.30
2680 2682 3.738282 CAGCTTCAATAGGTAGCTTAGCG 59.262 47.826 0.00 0.00 42.30 4.26
2759 2766 5.992829 TCAATTGCAGCTTGATGTGATTTTT 59.007 32.000 9.10 0.00 0.00 1.94
2809 2816 5.018539 TCCAAGTGAAGAACGAAGAGAAA 57.981 39.130 0.00 0.00 0.00 2.52
2837 2844 5.483685 AGTTAGTAACCATGCTGAGTTCA 57.516 39.130 9.46 0.00 0.00 3.18
2910 2917 4.074970 CTGTTTTAAGATGGAGCACTGGT 58.925 43.478 0.00 0.00 0.00 4.00
3042 3049 5.680619 TCCATTTTTATAGCCTCACGTCAT 58.319 37.500 0.00 0.00 0.00 3.06
3074 3081 8.865978 CAAGATGTCACAAATGATATGGTTTTG 58.134 33.333 0.00 0.00 36.85 2.44
3163 3170 1.067582 GCAGGATACGCTACCGCTT 59.932 57.895 0.00 0.00 46.39 4.68
3164 3171 1.215655 GCAGGATACGCTACCGCTTG 61.216 60.000 0.00 0.00 46.39 4.01
3165 3172 0.597637 CAGGATACGCTACCGCTTGG 60.598 60.000 0.00 0.00 46.39 3.61
3166 3173 1.954651 GGATACGCTACCGCTTGGC 60.955 63.158 0.00 0.00 38.22 4.52
3167 3174 1.067582 GATACGCTACCGCTTGGCT 59.932 57.895 0.00 0.00 38.22 4.75
3168 3175 0.529992 GATACGCTACCGCTTGGCTT 60.530 55.000 0.00 0.00 38.22 4.35
3169 3176 0.810031 ATACGCTACCGCTTGGCTTG 60.810 55.000 0.00 0.00 38.22 4.01
3170 3177 4.166011 CGCTACCGCTTGGCTTGC 62.166 66.667 0.00 0.00 35.53 4.01
3171 3178 3.055719 GCTACCGCTTGGCTTGCA 61.056 61.111 0.00 0.00 35.53 4.08
3172 3179 2.625823 GCTACCGCTTGGCTTGCAA 61.626 57.895 0.00 0.00 35.53 4.08
3173 3180 1.956043 CTACCGCTTGGCTTGCAAA 59.044 52.632 0.00 0.00 35.53 3.68
3174 3181 0.387239 CTACCGCTTGGCTTGCAAAC 60.387 55.000 0.00 0.00 35.53 2.93
3175 3182 1.103987 TACCGCTTGGCTTGCAAACA 61.104 50.000 0.00 0.00 35.53 2.83
3176 3183 1.227205 CCGCTTGGCTTGCAAACAA 60.227 52.632 13.61 13.61 0.00 2.83
3177 3184 0.600782 CCGCTTGGCTTGCAAACAAT 60.601 50.000 14.40 0.00 34.61 2.71
3178 3185 0.785979 CGCTTGGCTTGCAAACAATC 59.214 50.000 14.40 10.59 34.61 2.67
3179 3186 0.785979 GCTTGGCTTGCAAACAATCG 59.214 50.000 14.40 7.30 34.61 3.34
3180 3187 1.602668 GCTTGGCTTGCAAACAATCGA 60.603 47.619 14.40 0.00 34.61 3.59
3181 3188 2.741612 CTTGGCTTGCAAACAATCGAA 58.258 42.857 14.40 0.15 34.61 3.71
3182 3189 2.879002 TGGCTTGCAAACAATCGAAA 57.121 40.000 0.00 0.00 34.61 3.46
3183 3190 3.383620 TGGCTTGCAAACAATCGAAAT 57.616 38.095 0.00 0.00 34.61 2.17
3184 3191 3.058450 TGGCTTGCAAACAATCGAAATG 58.942 40.909 0.00 0.00 34.61 2.32
3185 3192 2.412770 GGCTTGCAAACAATCGAAATGG 59.587 45.455 0.00 0.00 34.61 3.16
3186 3193 3.316283 GCTTGCAAACAATCGAAATGGA 58.684 40.909 0.00 0.00 34.61 3.41
3187 3194 3.928375 GCTTGCAAACAATCGAAATGGAT 59.072 39.130 0.00 0.00 34.61 3.41
3188 3195 4.389687 GCTTGCAAACAATCGAAATGGATT 59.610 37.500 0.00 0.00 37.11 3.01
3189 3196 5.576384 GCTTGCAAACAATCGAAATGGATTA 59.424 36.000 0.00 0.00 34.96 1.75
3190 3197 6.256321 GCTTGCAAACAATCGAAATGGATTAT 59.744 34.615 0.00 0.00 34.96 1.28
3191 3198 7.434897 GCTTGCAAACAATCGAAATGGATTATA 59.565 33.333 0.00 0.00 34.96 0.98
3192 3199 8.627487 TTGCAAACAATCGAAATGGATTATAC 57.373 30.769 0.00 0.00 34.96 1.47
3193 3200 7.995289 TGCAAACAATCGAAATGGATTATACT 58.005 30.769 6.54 0.00 34.96 2.12
3194 3201 9.114952 TGCAAACAATCGAAATGGATTATACTA 57.885 29.630 6.54 0.00 34.96 1.82
3195 3202 9.382244 GCAAACAATCGAAATGGATTATACTAC 57.618 33.333 6.54 0.00 34.96 2.73
3201 3208 7.850935 TCGAAATGGATTATACTACTCCCTT 57.149 36.000 0.00 0.00 0.00 3.95
3202 3209 7.667557 TCGAAATGGATTATACTACTCCCTTG 58.332 38.462 0.00 0.00 0.00 3.61
3232 3239 4.911514 ATAAGTGTTGCGGTTTTGAACT 57.088 36.364 0.00 0.00 0.00 3.01
3233 3240 2.559998 AGTGTTGCGGTTTTGAACTG 57.440 45.000 0.00 0.00 40.80 3.16
3234 3241 1.816224 AGTGTTGCGGTTTTGAACTGT 59.184 42.857 2.03 0.00 39.98 3.55
3235 3242 3.011119 AGTGTTGCGGTTTTGAACTGTA 58.989 40.909 2.03 0.00 39.98 2.74
3236 3243 3.064820 AGTGTTGCGGTTTTGAACTGTAG 59.935 43.478 2.03 0.00 39.98 2.74
3237 3244 3.011119 TGTTGCGGTTTTGAACTGTAGT 58.989 40.909 2.03 0.00 39.98 2.73
3238 3245 4.034279 GTGTTGCGGTTTTGAACTGTAGTA 59.966 41.667 2.03 0.00 39.98 1.82
3239 3246 4.634883 TGTTGCGGTTTTGAACTGTAGTAA 59.365 37.500 2.03 0.00 39.98 2.24
3240 3247 4.799419 TGCGGTTTTGAACTGTAGTAAC 57.201 40.909 2.03 0.00 39.98 2.50
3241 3248 4.444536 TGCGGTTTTGAACTGTAGTAACT 58.555 39.130 2.03 0.00 39.98 2.24
3242 3249 5.599732 TGCGGTTTTGAACTGTAGTAACTA 58.400 37.500 2.03 0.00 39.98 2.24
3243 3250 5.693104 TGCGGTTTTGAACTGTAGTAACTAG 59.307 40.000 2.03 0.00 39.98 2.57
3244 3251 5.389202 GCGGTTTTGAACTGTAGTAACTAGC 60.389 44.000 0.00 0.00 39.98 3.42
3245 3252 5.693104 CGGTTTTGAACTGTAGTAACTAGCA 59.307 40.000 0.00 0.00 33.03 3.49
3246 3253 6.346359 CGGTTTTGAACTGTAGTAACTAGCAC 60.346 42.308 0.00 0.00 33.03 4.40
3247 3254 6.073385 GGTTTTGAACTGTAGTAACTAGCACC 60.073 42.308 0.00 0.00 0.00 5.01
3248 3255 5.794726 TTGAACTGTAGTAACTAGCACCA 57.205 39.130 0.00 0.00 0.00 4.17
3249 3256 5.130292 TGAACTGTAGTAACTAGCACCAC 57.870 43.478 0.00 0.00 0.00 4.16
3250 3257 4.585581 TGAACTGTAGTAACTAGCACCACA 59.414 41.667 0.00 0.00 0.00 4.17
3251 3258 5.245301 TGAACTGTAGTAACTAGCACCACAT 59.755 40.000 0.00 0.00 0.00 3.21
3264 3271 3.244976 GCACCACATAATGCTGTTTGTC 58.755 45.455 0.00 0.00 38.84 3.18
3269 3276 4.142534 CCACATAATGCTGTTTGTCCAGAG 60.143 45.833 0.00 0.00 34.23 3.35
3339 3346 2.681344 GGGCTAACCTAAACCAATCACG 59.319 50.000 0.00 0.00 35.85 4.35
3461 4484 1.203162 TGGCCACCTCATCAAAACCAT 60.203 47.619 0.00 0.00 0.00 3.55
3464 4487 2.762327 GCCACCTCATCAAAACCATGAT 59.238 45.455 0.00 0.00 40.64 2.45
3573 4599 8.090831 TCTACGTCTTAGTACTCTTGACTTGTA 58.909 37.037 0.00 4.95 0.00 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 6.408548 GGAAGATCTCATACAACCCATGAAGA 60.409 42.308 0.00 0.00 32.20 2.87
28 29 4.971282 AGGAAGATCTCATACAACCCATGA 59.029 41.667 0.00 0.00 0.00 3.07
99 100 2.428171 TGTACTAACCCATGGTCTACGC 59.572 50.000 11.73 0.00 33.12 4.42
195 196 3.817647 AGAGTGAATCAAGTTGCTCAACC 59.182 43.478 8.95 5.03 42.06 3.77
201 202 5.429957 AAGTCAAGAGTGAATCAAGTTGC 57.570 39.130 0.00 0.00 34.87 4.17
240 241 5.712152 AATGAAGCGAGTTGGAAAGATTT 57.288 34.783 0.00 0.00 0.00 2.17
299 300 5.503927 AGCATGCCTTGAAGAAGAAGATTA 58.496 37.500 15.66 0.00 0.00 1.75
358 359 5.925969 CCAAAGTGCGTTTCAAGGAATTATT 59.074 36.000 0.00 0.00 0.00 1.40
465 466 7.552459 TGATGACAATCTTTATGGACTAACGA 58.448 34.615 0.00 0.00 33.61 3.85
478 479 7.872483 GTGGTTTTGGTAATTGATGACAATCTT 59.128 33.333 0.00 0.00 44.67 2.40
535 536 4.504858 GATTTATATAGACACCGGCAGGG 58.495 47.826 8.08 0.00 43.47 4.45
536 537 4.174009 CGATTTATATAGACACCGGCAGG 58.826 47.826 0.00 0.00 45.13 4.85
537 538 4.174009 CCGATTTATATAGACACCGGCAG 58.826 47.826 0.00 0.00 0.00 4.85
538 539 3.056393 CCCGATTTATATAGACACCGGCA 60.056 47.826 0.00 0.00 34.90 5.69
539 540 3.518590 CCCGATTTATATAGACACCGGC 58.481 50.000 0.00 0.00 34.90 6.13
540 541 3.118884 CCCCCGATTTATATAGACACCGG 60.119 52.174 0.00 0.00 35.88 5.28
541 542 3.512724 ACCCCCGATTTATATAGACACCG 59.487 47.826 0.00 0.00 0.00 4.94
542 543 5.221783 ACAACCCCCGATTTATATAGACACC 60.222 44.000 0.00 0.00 0.00 4.16
543 544 5.861727 ACAACCCCCGATTTATATAGACAC 58.138 41.667 0.00 0.00 0.00 3.67
544 545 6.783977 ACTACAACCCCCGATTTATATAGACA 59.216 38.462 0.00 0.00 0.00 3.41
545 546 7.178097 AGACTACAACCCCCGATTTATATAGAC 59.822 40.741 0.00 0.00 0.00 2.59
546 547 7.243824 AGACTACAACCCCCGATTTATATAGA 58.756 38.462 0.00 0.00 0.00 1.98
547 548 7.477945 AGACTACAACCCCCGATTTATATAG 57.522 40.000 0.00 0.00 0.00 1.31
548 549 7.860649 AAGACTACAACCCCCGATTTATATA 57.139 36.000 0.00 0.00 0.00 0.86
549 550 6.758806 AAGACTACAACCCCCGATTTATAT 57.241 37.500 0.00 0.00 0.00 0.86
550 551 6.564557 AAAGACTACAACCCCCGATTTATA 57.435 37.500 0.00 0.00 0.00 0.98
551 552 5.446260 AAAGACTACAACCCCCGATTTAT 57.554 39.130 0.00 0.00 0.00 1.40
552 553 4.914177 AAAGACTACAACCCCCGATTTA 57.086 40.909 0.00 0.00 0.00 1.40
553 554 3.801307 AAAGACTACAACCCCCGATTT 57.199 42.857 0.00 0.00 0.00 2.17
554 555 3.368739 CGTAAAGACTACAACCCCCGATT 60.369 47.826 0.00 0.00 0.00 3.34
555 556 2.167075 CGTAAAGACTACAACCCCCGAT 59.833 50.000 0.00 0.00 0.00 4.18
556 557 1.545582 CGTAAAGACTACAACCCCCGA 59.454 52.381 0.00 0.00 0.00 5.14
557 558 1.404583 CCGTAAAGACTACAACCCCCG 60.405 57.143 0.00 0.00 0.00 5.73
558 559 1.901833 TCCGTAAAGACTACAACCCCC 59.098 52.381 0.00 0.00 0.00 5.40
559 560 2.827921 TCTCCGTAAAGACTACAACCCC 59.172 50.000 0.00 0.00 0.00 4.95
560 561 3.760684 TCTCTCCGTAAAGACTACAACCC 59.239 47.826 0.00 0.00 0.00 4.11
561 562 4.142425 CCTCTCTCCGTAAAGACTACAACC 60.142 50.000 0.00 0.00 0.00 3.77
562 563 4.458642 ACCTCTCTCCGTAAAGACTACAAC 59.541 45.833 0.00 0.00 0.00 3.32
563 564 4.660168 ACCTCTCTCCGTAAAGACTACAA 58.340 43.478 0.00 0.00 0.00 2.41
564 565 4.298103 ACCTCTCTCCGTAAAGACTACA 57.702 45.455 0.00 0.00 0.00 2.74
565 566 7.877097 TGATATACCTCTCTCCGTAAAGACTAC 59.123 40.741 0.00 0.00 0.00 2.73
566 567 7.971201 TGATATACCTCTCTCCGTAAAGACTA 58.029 38.462 0.00 0.00 0.00 2.59
567 568 6.839454 TGATATACCTCTCTCCGTAAAGACT 58.161 40.000 0.00 0.00 0.00 3.24
568 569 7.390996 TGATGATATACCTCTCTCCGTAAAGAC 59.609 40.741 0.00 0.00 0.00 3.01
569 570 7.459234 TGATGATATACCTCTCTCCGTAAAGA 58.541 38.462 0.00 0.00 0.00 2.52
570 571 7.689446 TGATGATATACCTCTCTCCGTAAAG 57.311 40.000 0.00 0.00 0.00 1.85
571 572 8.110271 AGATGATGATATACCTCTCTCCGTAAA 58.890 37.037 0.00 0.00 0.00 2.01
572 573 7.634718 AGATGATGATATACCTCTCTCCGTAA 58.365 38.462 0.00 0.00 0.00 3.18
573 574 7.092846 TGAGATGATGATATACCTCTCTCCGTA 60.093 40.741 0.00 0.00 32.33 4.02
574 575 6.073447 AGATGATGATATACCTCTCTCCGT 57.927 41.667 0.00 0.00 0.00 4.69
575 576 6.118852 TGAGATGATGATATACCTCTCTCCG 58.881 44.000 0.00 0.00 32.33 4.63
576 577 7.779326 TGATGAGATGATGATATACCTCTCTCC 59.221 40.741 0.00 0.00 32.33 3.71
577 578 8.623903 GTGATGAGATGATGATATACCTCTCTC 58.376 40.741 0.00 0.00 32.33 3.20
578 579 7.560991 GGTGATGAGATGATGATATACCTCTCT 59.439 40.741 0.00 0.00 32.33 3.10
579 580 7.560991 AGGTGATGAGATGATGATATACCTCTC 59.439 40.741 0.00 0.00 29.34 3.20
580 581 7.420856 AGGTGATGAGATGATGATATACCTCT 58.579 38.462 0.00 0.00 29.34 3.69
581 582 7.658525 AGGTGATGAGATGATGATATACCTC 57.341 40.000 0.00 0.00 29.34 3.85
582 583 9.199645 CTAAGGTGATGAGATGATGATATACCT 57.800 37.037 0.00 0.00 36.45 3.08
583 584 8.420222 CCTAAGGTGATGAGATGATGATATACC 58.580 40.741 0.00 0.00 0.00 2.73
584 585 8.420222 CCCTAAGGTGATGAGATGATGATATAC 58.580 40.741 0.00 0.00 0.00 1.47
585 586 8.544687 CCCTAAGGTGATGAGATGATGATATA 57.455 38.462 0.00 0.00 0.00 0.86
586 587 7.434927 CCCTAAGGTGATGAGATGATGATAT 57.565 40.000 0.00 0.00 0.00 1.63
587 588 6.864151 CCCTAAGGTGATGAGATGATGATA 57.136 41.667 0.00 0.00 0.00 2.15
588 589 5.758790 CCCTAAGGTGATGAGATGATGAT 57.241 43.478 0.00 0.00 0.00 2.45
597 598 8.811114 GCATGAGCTAAACCCTAAGGTGATGA 62.811 46.154 0.00 0.00 41.47 2.92
598 599 6.714730 GCATGAGCTAAACCCTAAGGTGATG 61.715 48.000 0.00 0.00 41.47 3.07
599 600 4.687219 GCATGAGCTAAACCCTAAGGTGAT 60.687 45.833 0.00 0.00 41.47 3.06
600 601 3.370527 GCATGAGCTAAACCCTAAGGTGA 60.371 47.826 0.00 0.00 41.47 4.02
601 602 2.945668 GCATGAGCTAAACCCTAAGGTG 59.054 50.000 0.00 0.00 41.47 4.00
602 603 3.283259 GCATGAGCTAAACCCTAAGGT 57.717 47.619 0.00 0.00 43.31 3.50
618 619 2.030363 GGTCTACCTCGAGATCAGCATG 60.030 54.545 15.71 0.00 37.54 4.06
619 620 2.158534 AGGTCTACCTCGAGATCAGCAT 60.159 50.000 15.71 0.00 44.77 3.79
620 621 1.213182 AGGTCTACCTCGAGATCAGCA 59.787 52.381 15.71 0.00 44.77 4.41
621 622 1.975660 AGGTCTACCTCGAGATCAGC 58.024 55.000 15.71 4.42 44.77 4.26
632 633 9.937230 ATGGTTTCCAGAGTAGGTAGGTCTACC 62.937 48.148 17.09 17.09 45.58 3.18
633 634 4.644234 GGTTTCCAGAGTAGGTAGGTCTAC 59.356 50.000 0.00 0.00 39.76 2.59
634 635 4.293102 TGGTTTCCAGAGTAGGTAGGTCTA 59.707 45.833 0.00 0.00 0.00 2.59
635 636 3.077088 TGGTTTCCAGAGTAGGTAGGTCT 59.923 47.826 0.00 0.00 0.00 3.85
636 637 3.438183 TGGTTTCCAGAGTAGGTAGGTC 58.562 50.000 0.00 0.00 0.00 3.85
637 638 3.555117 TGGTTTCCAGAGTAGGTAGGT 57.445 47.619 0.00 0.00 0.00 3.08
638 639 5.209659 AGTATGGTTTCCAGAGTAGGTAGG 58.790 45.833 0.00 0.00 36.75 3.18
639 640 5.302313 GGAGTATGGTTTCCAGAGTAGGTAG 59.698 48.000 0.00 0.00 36.75 3.18
640 641 5.206587 GGAGTATGGTTTCCAGAGTAGGTA 58.793 45.833 0.00 0.00 36.75 3.08
641 642 4.031611 GGAGTATGGTTTCCAGAGTAGGT 58.968 47.826 0.00 0.00 36.75 3.08
642 643 3.388350 GGGAGTATGGTTTCCAGAGTAGG 59.612 52.174 0.00 0.00 36.75 3.18
643 644 4.290942 AGGGAGTATGGTTTCCAGAGTAG 58.709 47.826 0.00 0.00 36.75 2.57
644 645 4.348020 AGGGAGTATGGTTTCCAGAGTA 57.652 45.455 0.00 0.00 36.75 2.59
645 646 3.207044 AGGGAGTATGGTTTCCAGAGT 57.793 47.619 0.00 0.00 36.75 3.24
646 647 3.519510 TGAAGGGAGTATGGTTTCCAGAG 59.480 47.826 0.00 0.00 36.75 3.35
647 648 3.526899 TGAAGGGAGTATGGTTTCCAGA 58.473 45.455 0.00 0.00 36.75 3.86
648 649 4.510167 ATGAAGGGAGTATGGTTTCCAG 57.490 45.455 0.00 0.00 36.75 3.86
649 650 4.325030 GGAATGAAGGGAGTATGGTTTCCA 60.325 45.833 0.00 0.00 38.19 3.53
650 651 4.207955 GGAATGAAGGGAGTATGGTTTCC 58.792 47.826 0.00 0.00 0.00 3.13
651 652 4.855340 TGGAATGAAGGGAGTATGGTTTC 58.145 43.478 0.00 0.00 0.00 2.78
652 653 4.946160 TGGAATGAAGGGAGTATGGTTT 57.054 40.909 0.00 0.00 0.00 3.27
653 654 4.946160 TTGGAATGAAGGGAGTATGGTT 57.054 40.909 0.00 0.00 0.00 3.67
654 655 4.946160 TTTGGAATGAAGGGAGTATGGT 57.054 40.909 0.00 0.00 0.00 3.55
655 656 9.236006 CTATATTTTGGAATGAAGGGAGTATGG 57.764 37.037 0.00 0.00 0.00 2.74
656 657 9.799106 ACTATATTTTGGAATGAAGGGAGTATG 57.201 33.333 0.00 0.00 0.00 2.39
657 658 9.799106 CACTATATTTTGGAATGAAGGGAGTAT 57.201 33.333 0.00 0.00 0.00 2.12
658 659 7.719633 GCACTATATTTTGGAATGAAGGGAGTA 59.280 37.037 0.00 0.00 0.00 2.59
659 660 6.547510 GCACTATATTTTGGAATGAAGGGAGT 59.452 38.462 0.00 0.00 0.00 3.85
660 661 6.293626 CGCACTATATTTTGGAATGAAGGGAG 60.294 42.308 0.00 0.00 0.00 4.30
661 662 5.530915 CGCACTATATTTTGGAATGAAGGGA 59.469 40.000 0.00 0.00 0.00 4.20
662 663 5.762045 CGCACTATATTTTGGAATGAAGGG 58.238 41.667 0.00 0.00 0.00 3.95
663 664 5.215160 GCGCACTATATTTTGGAATGAAGG 58.785 41.667 0.30 0.00 0.00 3.46
664 665 5.215160 GGCGCACTATATTTTGGAATGAAG 58.785 41.667 10.83 0.00 0.00 3.02
665 666 4.037446 GGGCGCACTATATTTTGGAATGAA 59.963 41.667 10.83 0.00 0.00 2.57
666 667 3.568007 GGGCGCACTATATTTTGGAATGA 59.432 43.478 10.83 0.00 0.00 2.57
667 668 3.609175 CGGGCGCACTATATTTTGGAATG 60.609 47.826 8.62 0.00 0.00 2.67
668 669 2.552315 CGGGCGCACTATATTTTGGAAT 59.448 45.455 8.62 0.00 0.00 3.01
669 670 1.944024 CGGGCGCACTATATTTTGGAA 59.056 47.619 8.62 0.00 0.00 3.53
670 671 1.588674 CGGGCGCACTATATTTTGGA 58.411 50.000 8.62 0.00 0.00 3.53
671 672 0.040425 GCGGGCGCACTATATTTTGG 60.040 55.000 8.62 0.00 41.49 3.28
672 673 0.384230 CGCGGGCGCACTATATTTTG 60.384 55.000 8.62 0.00 42.06 2.44
673 674 1.938861 CGCGGGCGCACTATATTTT 59.061 52.632 8.62 0.00 42.06 1.82
674 675 3.637714 CGCGGGCGCACTATATTT 58.362 55.556 8.62 0.00 42.06 1.40
688 689 1.733041 TTGAACCTCGAGAAGCGCG 60.733 57.895 15.71 0.00 40.61 6.86
689 690 0.667792 AGTTGAACCTCGAGAAGCGC 60.668 55.000 15.71 0.00 40.61 5.92
690 691 1.784525 AAGTTGAACCTCGAGAAGCG 58.215 50.000 15.71 0.00 42.69 4.68
691 692 3.059529 GTCAAAGTTGAACCTCGAGAAGC 60.060 47.826 15.71 2.59 39.21 3.86
692 693 3.495001 GGTCAAAGTTGAACCTCGAGAAG 59.505 47.826 15.71 0.00 38.96 2.85
693 694 3.118555 TGGTCAAAGTTGAACCTCGAGAA 60.119 43.478 15.71 0.00 44.20 2.87
694 695 2.432874 TGGTCAAAGTTGAACCTCGAGA 59.567 45.455 15.71 0.00 44.20 4.04
695 696 2.833794 TGGTCAAAGTTGAACCTCGAG 58.166 47.619 5.13 5.13 44.20 4.04
696 697 2.992124 TGGTCAAAGTTGAACCTCGA 57.008 45.000 6.62 0.00 44.20 4.04
697 698 3.138304 TGATGGTCAAAGTTGAACCTCG 58.862 45.455 6.62 0.00 44.20 4.63
698 699 5.712152 ATTGATGGTCAAAGTTGAACCTC 57.288 39.130 6.62 6.97 44.20 3.85
699 700 6.484364 AAATTGATGGTCAAAGTTGAACCT 57.516 33.333 6.62 0.00 44.20 3.50
700 701 7.170828 GGTTAAATTGATGGTCAAAGTTGAACC 59.829 37.037 6.62 8.48 44.20 3.62
701 702 7.708752 TGGTTAAATTGATGGTCAAAGTTGAAC 59.291 33.333 1.98 1.98 45.04 3.18
702 703 7.786030 TGGTTAAATTGATGGTCAAAGTTGAA 58.214 30.769 0.00 0.00 40.12 2.69
703 704 7.353414 TGGTTAAATTGATGGTCAAAGTTGA 57.647 32.000 0.00 0.00 40.12 3.18
704 705 7.306515 CGTTGGTTAAATTGATGGTCAAAGTTG 60.307 37.037 0.00 0.00 40.12 3.16
705 706 6.699642 CGTTGGTTAAATTGATGGTCAAAGTT 59.300 34.615 0.00 0.00 40.12 2.66
706 707 6.039941 TCGTTGGTTAAATTGATGGTCAAAGT 59.960 34.615 0.00 0.00 40.12 2.66
707 708 6.442952 TCGTTGGTTAAATTGATGGTCAAAG 58.557 36.000 0.00 0.00 40.12 2.77
708 709 6.263392 TCTCGTTGGTTAAATTGATGGTCAAA 59.737 34.615 0.00 0.00 40.12 2.69
709 710 5.765677 TCTCGTTGGTTAAATTGATGGTCAA 59.234 36.000 0.00 0.00 41.09 3.18
710 711 5.180492 GTCTCGTTGGTTAAATTGATGGTCA 59.820 40.000 0.00 0.00 0.00 4.02
711 712 5.391629 GGTCTCGTTGGTTAAATTGATGGTC 60.392 44.000 0.00 0.00 0.00 4.02
712 713 4.457949 GGTCTCGTTGGTTAAATTGATGGT 59.542 41.667 0.00 0.00 0.00 3.55
713 714 4.457603 TGGTCTCGTTGGTTAAATTGATGG 59.542 41.667 0.00 0.00 0.00 3.51
714 715 5.621197 TGGTCTCGTTGGTTAAATTGATG 57.379 39.130 0.00 0.00 0.00 3.07
715 716 5.768164 AGTTGGTCTCGTTGGTTAAATTGAT 59.232 36.000 0.00 0.00 0.00 2.57
716 717 5.008217 CAGTTGGTCTCGTTGGTTAAATTGA 59.992 40.000 0.00 0.00 0.00 2.57
717 718 5.212194 CAGTTGGTCTCGTTGGTTAAATTG 58.788 41.667 0.00 0.00 0.00 2.32
718 719 4.261447 GCAGTTGGTCTCGTTGGTTAAATT 60.261 41.667 0.00 0.00 0.00 1.82
719 720 3.252458 GCAGTTGGTCTCGTTGGTTAAAT 59.748 43.478 0.00 0.00 0.00 1.40
720 721 2.614983 GCAGTTGGTCTCGTTGGTTAAA 59.385 45.455 0.00 0.00 0.00 1.52
721 722 2.215196 GCAGTTGGTCTCGTTGGTTAA 58.785 47.619 0.00 0.00 0.00 2.01
722 723 1.870580 CGCAGTTGGTCTCGTTGGTTA 60.871 52.381 0.00 0.00 0.00 2.85
723 724 1.157870 CGCAGTTGGTCTCGTTGGTT 61.158 55.000 0.00 0.00 0.00 3.67
724 725 1.594293 CGCAGTTGGTCTCGTTGGT 60.594 57.895 0.00 0.00 0.00 3.67
725 726 2.317609 CCGCAGTTGGTCTCGTTGG 61.318 63.158 0.00 0.00 0.00 3.77
726 727 2.954753 GCCGCAGTTGGTCTCGTTG 61.955 63.158 0.00 0.00 0.00 4.10
727 728 2.665185 GCCGCAGTTGGTCTCGTT 60.665 61.111 0.00 0.00 0.00 3.85
734 735 4.697756 TTCTCCCGCCGCAGTTGG 62.698 66.667 0.00 0.00 0.00 3.77
735 736 1.791103 TTTTTCTCCCGCCGCAGTTG 61.791 55.000 0.00 0.00 0.00 3.16
736 737 1.527380 TTTTTCTCCCGCCGCAGTT 60.527 52.632 0.00 0.00 0.00 3.16
737 738 2.112297 TTTTTCTCCCGCCGCAGT 59.888 55.556 0.00 0.00 0.00 4.40
778 779 7.889589 ATTATATCAGTGAATTCGCATTCGA 57.110 32.000 20.55 11.32 41.77 3.71
779 780 8.939586 AAATTATATCAGTGAATTCGCATTCG 57.060 30.769 20.55 6.59 41.77 3.34
783 784 9.853555 AACAAAAATTATATCAGTGAATTCGCA 57.146 25.926 20.55 1.59 0.00 5.10
787 788 9.801873 CGGGAACAAAAATTATATCAGTGAATT 57.198 29.630 0.00 0.00 0.00 2.17
788 789 7.920682 GCGGGAACAAAAATTATATCAGTGAAT 59.079 33.333 0.00 0.00 0.00 2.57
789 790 7.254852 GCGGGAACAAAAATTATATCAGTGAA 58.745 34.615 0.00 0.00 0.00 3.18
790 791 6.183360 GGCGGGAACAAAAATTATATCAGTGA 60.183 38.462 0.00 0.00 0.00 3.41
791 792 5.977129 GGCGGGAACAAAAATTATATCAGTG 59.023 40.000 0.00 0.00 0.00 3.66
792 793 5.220970 CGGCGGGAACAAAAATTATATCAGT 60.221 40.000 0.00 0.00 0.00 3.41
793 794 5.212194 CGGCGGGAACAAAAATTATATCAG 58.788 41.667 0.00 0.00 0.00 2.90
794 795 4.498345 GCGGCGGGAACAAAAATTATATCA 60.498 41.667 9.78 0.00 0.00 2.15
795 796 3.978855 GCGGCGGGAACAAAAATTATATC 59.021 43.478 9.78 0.00 0.00 1.63
796 797 3.381908 TGCGGCGGGAACAAAAATTATAT 59.618 39.130 9.78 0.00 0.00 0.86
797 798 2.753452 TGCGGCGGGAACAAAAATTATA 59.247 40.909 9.78 0.00 0.00 0.98
798 799 1.546476 TGCGGCGGGAACAAAAATTAT 59.454 42.857 9.78 0.00 0.00 1.28
799 800 0.959553 TGCGGCGGGAACAAAAATTA 59.040 45.000 9.78 0.00 0.00 1.40
800 801 0.105039 TTGCGGCGGGAACAAAAATT 59.895 45.000 9.78 0.00 0.00 1.82
801 802 0.320050 ATTGCGGCGGGAACAAAAAT 59.680 45.000 9.78 0.00 0.00 1.82
802 803 0.319125 GATTGCGGCGGGAACAAAAA 60.319 50.000 9.78 0.00 0.00 1.94
803 804 1.287503 GATTGCGGCGGGAACAAAA 59.712 52.632 9.78 0.00 0.00 2.44
804 805 1.861542 CTGATTGCGGCGGGAACAAA 61.862 55.000 9.78 0.00 0.00 2.83
805 806 2.281831 TGATTGCGGCGGGAACAA 60.282 55.556 9.78 4.36 0.00 2.83
806 807 2.745884 CTGATTGCGGCGGGAACA 60.746 61.111 9.78 0.00 0.00 3.18
807 808 2.746277 ACTGATTGCGGCGGGAAC 60.746 61.111 9.78 0.00 0.00 3.62
808 809 2.435938 GACTGATTGCGGCGGGAA 60.436 61.111 9.78 0.00 0.00 3.97
809 810 3.371097 GAGACTGATTGCGGCGGGA 62.371 63.158 9.78 0.00 0.00 5.14
810 811 2.892425 GAGACTGATTGCGGCGGG 60.892 66.667 9.78 0.00 0.00 6.13
811 812 2.960957 ATCGAGACTGATTGCGGCGG 62.961 60.000 9.78 0.00 0.00 6.13
812 813 0.317854 TATCGAGACTGATTGCGGCG 60.318 55.000 0.51 0.51 0.00 6.46
813 814 1.269309 ACTATCGAGACTGATTGCGGC 60.269 52.381 0.00 0.00 0.00 6.53
814 815 2.783828 ACTATCGAGACTGATTGCGG 57.216 50.000 0.00 0.00 0.00 5.69
815 816 6.755461 ATTTAACTATCGAGACTGATTGCG 57.245 37.500 0.00 0.00 0.00 4.85
816 817 9.851043 GTAAATTTAACTATCGAGACTGATTGC 57.149 33.333 0.00 0.00 0.00 3.56
818 819 9.245962 CCGTAAATTTAACTATCGAGACTGATT 57.754 33.333 0.00 0.00 0.00 2.57
819 820 8.411683 ACCGTAAATTTAACTATCGAGACTGAT 58.588 33.333 0.00 0.00 0.00 2.90
820 821 7.765307 ACCGTAAATTTAACTATCGAGACTGA 58.235 34.615 0.00 0.00 0.00 3.41
821 822 7.699391 TGACCGTAAATTTAACTATCGAGACTG 59.301 37.037 0.00 0.00 0.00 3.51
822 823 7.765307 TGACCGTAAATTTAACTATCGAGACT 58.235 34.615 0.00 0.00 0.00 3.24
823 824 7.975866 TGACCGTAAATTTAACTATCGAGAC 57.024 36.000 0.00 0.00 0.00 3.36
824 825 8.984891 TTTGACCGTAAATTTAACTATCGAGA 57.015 30.769 0.00 0.00 0.00 4.04
825 826 8.866956 ACTTTGACCGTAAATTTAACTATCGAG 58.133 33.333 0.00 0.00 0.00 4.04
826 827 8.761575 ACTTTGACCGTAAATTTAACTATCGA 57.238 30.769 0.00 0.00 0.00 3.59
827 828 9.257865 CAACTTTGACCGTAAATTTAACTATCG 57.742 33.333 0.00 0.00 0.00 2.92
831 832 7.646526 GCTTCAACTTTGACCGTAAATTTAACT 59.353 33.333 0.00 0.00 36.83 2.24
832 833 7.432838 TGCTTCAACTTTGACCGTAAATTTAAC 59.567 33.333 0.00 0.00 36.83 2.01
833 834 7.481642 TGCTTCAACTTTGACCGTAAATTTAA 58.518 30.769 0.00 0.00 36.83 1.52
834 835 7.028926 TGCTTCAACTTTGACCGTAAATTTA 57.971 32.000 0.00 0.00 36.83 1.40
835 836 5.897050 TGCTTCAACTTTGACCGTAAATTT 58.103 33.333 0.00 0.00 36.83 1.82
836 837 5.508200 TGCTTCAACTTTGACCGTAAATT 57.492 34.783 0.00 0.00 36.83 1.82
837 838 5.705609 ATGCTTCAACTTTGACCGTAAAT 57.294 34.783 0.00 0.00 36.83 1.40
838 839 6.348950 CCATATGCTTCAACTTTGACCGTAAA 60.349 38.462 0.00 0.00 36.83 2.01
839 840 5.123186 CCATATGCTTCAACTTTGACCGTAA 59.877 40.000 0.00 0.00 36.83 3.18
840 841 4.634004 CCATATGCTTCAACTTTGACCGTA 59.366 41.667 0.00 0.00 36.83 4.02
841 842 3.440173 CCATATGCTTCAACTTTGACCGT 59.560 43.478 0.00 0.00 36.83 4.83
842 843 3.689161 TCCATATGCTTCAACTTTGACCG 59.311 43.478 0.00 0.00 36.83 4.79
843 844 5.841957 ATCCATATGCTTCAACTTTGACC 57.158 39.130 0.00 0.00 36.83 4.02
844 845 7.041508 CCTCTATCCATATGCTTCAACTTTGAC 60.042 40.741 0.00 0.00 36.83 3.18
845 846 6.994496 CCTCTATCCATATGCTTCAACTTTGA 59.006 38.462 0.00 0.00 34.92 2.69
846 847 6.994496 TCCTCTATCCATATGCTTCAACTTTG 59.006 38.462 0.00 0.00 0.00 2.77
847 848 7.141758 TCCTCTATCCATATGCTTCAACTTT 57.858 36.000 0.00 0.00 0.00 2.66
848 849 6.753913 TCCTCTATCCATATGCTTCAACTT 57.246 37.500 0.00 0.00 0.00 2.66
849 850 6.743773 GCTTCCTCTATCCATATGCTTCAACT 60.744 42.308 0.00 0.00 0.00 3.16
850 851 5.411053 GCTTCCTCTATCCATATGCTTCAAC 59.589 44.000 0.00 0.00 0.00 3.18
851 852 5.072193 TGCTTCCTCTATCCATATGCTTCAA 59.928 40.000 0.00 0.00 0.00 2.69
852 853 4.594491 TGCTTCCTCTATCCATATGCTTCA 59.406 41.667 0.00 0.00 0.00 3.02
853 854 4.934602 GTGCTTCCTCTATCCATATGCTTC 59.065 45.833 0.00 0.00 0.00 3.86
854 855 4.596643 AGTGCTTCCTCTATCCATATGCTT 59.403 41.667 0.00 0.00 0.00 3.91
855 856 4.166539 AGTGCTTCCTCTATCCATATGCT 58.833 43.478 0.00 0.00 0.00 3.79
856 857 4.550076 AGTGCTTCCTCTATCCATATGC 57.450 45.455 0.00 0.00 0.00 3.14
857 858 6.596309 TGTAGTGCTTCCTCTATCCATATG 57.404 41.667 0.00 0.00 0.00 1.78
858 859 7.805083 AATGTAGTGCTTCCTCTATCCATAT 57.195 36.000 0.00 0.00 0.00 1.78
859 860 8.901472 ATAATGTAGTGCTTCCTCTATCCATA 57.099 34.615 0.00 0.00 0.00 2.74
860 861 7.805083 ATAATGTAGTGCTTCCTCTATCCAT 57.195 36.000 0.00 0.00 0.00 3.41
861 862 8.170730 TCTATAATGTAGTGCTTCCTCTATCCA 58.829 37.037 0.00 0.00 0.00 3.41
862 863 8.582657 TCTATAATGTAGTGCTTCCTCTATCC 57.417 38.462 0.00 0.00 0.00 2.59
865 866 8.807118 CCATTCTATAATGTAGTGCTTCCTCTA 58.193 37.037 0.74 0.00 40.84 2.43
866 867 7.510685 TCCATTCTATAATGTAGTGCTTCCTCT 59.489 37.037 0.74 0.00 40.84 3.69
867 868 7.671302 TCCATTCTATAATGTAGTGCTTCCTC 58.329 38.462 0.74 0.00 40.84 3.71
868 869 7.618019 TCCATTCTATAATGTAGTGCTTCCT 57.382 36.000 0.74 0.00 40.84 3.36
869 870 7.389053 CCTTCCATTCTATAATGTAGTGCTTCC 59.611 40.741 0.74 0.00 40.84 3.46
870 871 7.389053 CCCTTCCATTCTATAATGTAGTGCTTC 59.611 40.741 0.74 0.00 40.84 3.86
871 872 7.227156 CCCTTCCATTCTATAATGTAGTGCTT 58.773 38.462 0.74 0.00 40.84 3.91
872 873 6.240002 CCCCTTCCATTCTATAATGTAGTGCT 60.240 42.308 0.74 0.00 40.84 4.40
873 874 5.940470 CCCCTTCCATTCTATAATGTAGTGC 59.060 44.000 0.74 0.00 40.84 4.40
874 875 7.079451 ACCCCTTCCATTCTATAATGTAGTG 57.921 40.000 0.74 0.00 40.84 2.74
875 876 8.017251 AGTACCCCTTCCATTCTATAATGTAGT 58.983 37.037 0.74 0.00 40.84 2.73
876 877 8.437274 AGTACCCCTTCCATTCTATAATGTAG 57.563 38.462 0.74 0.00 40.84 2.74
878 879 8.990693 ATAGTACCCCTTCCATTCTATAATGT 57.009 34.615 0.74 0.00 40.84 2.71
882 883 9.710818 GATGTATAGTACCCCTTCCATTCTATA 57.289 37.037 0.00 0.00 0.00 1.31
883 884 7.624077 GGATGTATAGTACCCCTTCCATTCTAT 59.376 40.741 0.00 0.00 0.00 1.98
884 885 6.958192 GGATGTATAGTACCCCTTCCATTCTA 59.042 42.308 0.00 0.00 0.00 2.10
885 886 5.785940 GGATGTATAGTACCCCTTCCATTCT 59.214 44.000 0.00 0.00 0.00 2.40
886 887 5.546499 TGGATGTATAGTACCCCTTCCATTC 59.454 44.000 0.00 0.00 0.00 2.67
887 888 5.482580 TGGATGTATAGTACCCCTTCCATT 58.517 41.667 0.00 0.00 0.00 3.16
888 889 5.101254 TGGATGTATAGTACCCCTTCCAT 57.899 43.478 0.00 0.00 0.00 3.41
889 890 4.562934 TGGATGTATAGTACCCCTTCCA 57.437 45.455 0.00 0.00 0.00 3.53
890 891 7.750947 ATATTGGATGTATAGTACCCCTTCC 57.249 40.000 0.00 0.00 0.00 3.46
901 902 9.683870 TGCATGCTTGATTATATTGGATGTATA 57.316 29.630 20.33 0.00 0.00 1.47
902 903 8.464404 GTGCATGCTTGATTATATTGGATGTAT 58.536 33.333 20.33 0.00 0.00 2.29
903 904 7.094248 GGTGCATGCTTGATTATATTGGATGTA 60.094 37.037 20.33 0.00 0.00 2.29
904 905 6.294899 GGTGCATGCTTGATTATATTGGATGT 60.295 38.462 20.33 0.00 0.00 3.06
905 906 6.097356 GGTGCATGCTTGATTATATTGGATG 58.903 40.000 20.33 0.00 0.00 3.51
906 907 5.186409 GGGTGCATGCTTGATTATATTGGAT 59.814 40.000 20.33 0.00 0.00 3.41
907 908 4.523943 GGGTGCATGCTTGATTATATTGGA 59.476 41.667 20.33 0.00 0.00 3.53
908 909 4.616604 CGGGTGCATGCTTGATTATATTGG 60.617 45.833 20.33 0.00 0.00 3.16
909 910 4.478699 CGGGTGCATGCTTGATTATATTG 58.521 43.478 20.33 0.00 0.00 1.90
910 911 3.507233 CCGGGTGCATGCTTGATTATATT 59.493 43.478 20.33 0.00 0.00 1.28
911 912 3.084039 CCGGGTGCATGCTTGATTATAT 58.916 45.455 20.33 0.00 0.00 0.86
912 913 2.105649 TCCGGGTGCATGCTTGATTATA 59.894 45.455 20.33 0.00 0.00 0.98
913 914 1.133823 TCCGGGTGCATGCTTGATTAT 60.134 47.619 20.33 0.00 0.00 1.28
914 915 0.254462 TCCGGGTGCATGCTTGATTA 59.746 50.000 20.33 0.00 0.00 1.75
915 916 1.001020 TCCGGGTGCATGCTTGATT 60.001 52.632 20.33 0.00 0.00 2.57
916 917 1.750399 GTCCGGGTGCATGCTTGAT 60.750 57.895 20.33 0.00 0.00 2.57
917 918 2.359850 GTCCGGGTGCATGCTTGA 60.360 61.111 20.33 5.24 0.00 3.02
918 919 3.803082 CGTCCGGGTGCATGCTTG 61.803 66.667 20.33 5.69 0.00 4.01
919 920 3.545124 TTCGTCCGGGTGCATGCTT 62.545 57.895 20.33 0.00 0.00 3.91
920 921 4.015406 TTCGTCCGGGTGCATGCT 62.015 61.111 20.33 0.00 0.00 3.79
921 922 3.799755 GTTCGTCCGGGTGCATGC 61.800 66.667 11.82 11.82 0.00 4.06
1207 1209 2.579738 GGACTGGGAGAGAACGCC 59.420 66.667 0.00 0.00 35.24 5.68
1209 1211 0.323908 AGAGGGACTGGGAGAGAACG 60.324 60.000 0.00 0.00 41.55 3.95
1237 1239 0.530650 GAGGAGAATGCGGCGATGAA 60.531 55.000 12.98 0.00 0.00 2.57
1426 1428 2.997952 TTTAGGACGCGGCAGTGCAA 62.998 55.000 17.00 0.00 34.76 4.08
1644 1646 1.832883 TCCACCATGAAATGTTCCGG 58.167 50.000 0.00 0.00 44.81 5.14
1645 1647 2.414029 CGTTCCACCATGAAATGTTCCG 60.414 50.000 0.00 0.00 44.81 4.30
1698 1700 2.574018 CCGCGATGCCTCCTCCATA 61.574 63.158 8.23 0.00 0.00 2.74
1737 1739 0.034756 TCCATGACACAACGTCCCTG 59.965 55.000 0.00 0.00 44.71 4.45
1844 1846 1.411246 ACACAAGTGTTAGCTCGGTCA 59.589 47.619 0.00 0.00 41.83 4.02
1947 1949 3.064820 CGTTACCAACATAACCATCAGCC 59.935 47.826 0.00 0.00 32.36 4.85
1986 1988 1.137194 CAATCTGCCGCATTTCGCA 59.863 52.632 0.00 0.00 42.60 5.10
1995 1997 2.409870 GGCAAGGTCCAATCTGCCG 61.410 63.158 8.13 0.00 32.56 5.69
2015 2017 3.380954 TGACATGCTTTCAAAGACTTGCA 59.619 39.130 0.00 0.21 32.14 4.08
2157 2159 0.178995 TGCAGGCAATCAAGACACCA 60.179 50.000 0.00 0.00 0.00 4.17
2253 2255 1.378531 TCATGCACCCGTAATGCTTC 58.621 50.000 0.00 0.00 43.77 3.86
2578 2580 6.609533 TCTTCGCTCTAAATATTAGCTACGG 58.390 40.000 7.03 0.00 34.03 4.02
2581 2583 9.627395 GTCATTCTTCGCTCTAAATATTAGCTA 57.373 33.333 7.03 0.00 34.03 3.32
2609 2611 6.183360 CGAATCAGACTTCTGGAACTGAATTC 60.183 42.308 6.40 0.00 44.86 2.17
2611 2613 5.174395 CGAATCAGACTTCTGGAACTGAAT 58.826 41.667 6.40 0.00 44.86 2.57
2680 2682 5.557866 AGTACCATGTAACAAAGGAGGAAC 58.442 41.667 0.00 0.00 0.00 3.62
2809 2816 3.994392 CAGCATGGTTACTAACTTGACGT 59.006 43.478 0.00 0.00 0.00 4.34
2910 2917 6.976934 AGGAAATTAAGCTTTTCAAGGTCA 57.023 33.333 3.20 0.00 38.49 4.02
3042 3049 9.628746 CATATCATTTGTGACATCTTGTTTCAA 57.371 29.630 0.00 0.00 0.00 2.69
3074 3081 0.813821 GGGTAGGTAGACGTGGACAC 59.186 60.000 0.00 0.00 0.00 3.67
3163 3170 2.879002 TTTCGATTGTTTGCAAGCCA 57.121 40.000 11.02 3.83 37.70 4.75
3164 3171 2.412770 CCATTTCGATTGTTTGCAAGCC 59.587 45.455 11.02 1.01 37.70 4.35
3165 3172 3.316283 TCCATTTCGATTGTTTGCAAGC 58.684 40.909 6.31 6.31 38.10 4.01
3166 3173 7.760131 ATAATCCATTTCGATTGTTTGCAAG 57.240 32.000 0.00 0.00 38.10 4.01
3167 3174 8.465999 AGTATAATCCATTTCGATTGTTTGCAA 58.534 29.630 0.00 0.00 39.16 4.08
3168 3175 7.995289 AGTATAATCCATTTCGATTGTTTGCA 58.005 30.769 0.00 0.00 34.35 4.08
3169 3176 9.382244 GTAGTATAATCCATTTCGATTGTTTGC 57.618 33.333 0.00 0.00 34.35 3.68
3190 3197 9.670442 ACTTATTATGGATTCAAGGGAGTAGTA 57.330 33.333 0.00 0.00 0.00 1.82
3191 3198 8.432805 CACTTATTATGGATTCAAGGGAGTAGT 58.567 37.037 0.00 0.00 0.00 2.73
3192 3199 8.432805 ACACTTATTATGGATTCAAGGGAGTAG 58.567 37.037 0.00 0.00 0.00 2.57
3193 3200 8.331931 ACACTTATTATGGATTCAAGGGAGTA 57.668 34.615 0.00 0.00 0.00 2.59
3194 3201 7.213178 ACACTTATTATGGATTCAAGGGAGT 57.787 36.000 0.00 0.00 0.00 3.85
3195 3202 7.469181 GCAACACTTATTATGGATTCAAGGGAG 60.469 40.741 0.00 0.00 0.00 4.30
3196 3203 6.321181 GCAACACTTATTATGGATTCAAGGGA 59.679 38.462 0.00 0.00 0.00 4.20
3201 3208 5.189928 ACCGCAACACTTATTATGGATTCA 58.810 37.500 0.00 0.00 0.00 2.57
3202 3209 5.751243 ACCGCAACACTTATTATGGATTC 57.249 39.130 0.00 0.00 0.00 2.52
3214 3221 1.816224 ACAGTTCAAAACCGCAACACT 59.184 42.857 0.00 0.00 0.00 3.55
3215 3222 2.271821 ACAGTTCAAAACCGCAACAC 57.728 45.000 0.00 0.00 0.00 3.32
3232 3239 6.046593 GCATTATGTGGTGCTAGTTACTACA 58.953 40.000 16.39 16.39 42.43 2.74
3233 3240 6.526566 GCATTATGTGGTGCTAGTTACTAC 57.473 41.667 8.22 8.22 38.30 2.73
3245 3252 3.495331 TGGACAAACAGCATTATGTGGT 58.505 40.909 0.00 0.00 39.64 4.16
3246 3253 3.758023 TCTGGACAAACAGCATTATGTGG 59.242 43.478 0.00 0.00 38.36 4.17
3247 3254 4.456911 ACTCTGGACAAACAGCATTATGTG 59.543 41.667 0.00 0.00 38.36 3.21
3248 3255 4.655963 ACTCTGGACAAACAGCATTATGT 58.344 39.130 0.00 0.00 38.36 2.29
3249 3256 6.741992 TTACTCTGGACAAACAGCATTATG 57.258 37.500 0.00 0.00 38.36 1.90
3250 3257 6.942576 ACTTTACTCTGGACAAACAGCATTAT 59.057 34.615 0.00 0.00 38.36 1.28
3251 3258 6.296026 ACTTTACTCTGGACAAACAGCATTA 58.704 36.000 0.00 0.00 38.36 1.90
3264 3271 7.307455 GCTTACAACTTCTGAACTTTACTCTGG 60.307 40.741 0.00 0.00 0.00 3.86
3269 3276 8.905103 TTTTGCTTACAACTTCTGAACTTTAC 57.095 30.769 0.00 0.00 34.87 2.01
3339 3346 3.304293 GCTTCAACTTCAACACAGCAAAC 59.696 43.478 0.00 0.00 0.00 2.93
3505 4531 1.368203 TCCTTCCTAGGGTGGATTGGA 59.632 52.381 16.43 8.28 42.26 3.53
3506 4532 1.893315 TCCTTCCTAGGGTGGATTGG 58.107 55.000 16.43 6.45 42.26 3.16
3507 4533 3.010138 TGTTTCCTTCCTAGGGTGGATTG 59.990 47.826 19.62 0.25 42.26 2.67
3508 4534 3.265489 TGTTTCCTTCCTAGGGTGGATT 58.735 45.455 19.62 0.00 42.26 3.01
3509 4535 2.929301 TGTTTCCTTCCTAGGGTGGAT 58.071 47.619 19.62 0.00 42.26 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.