Multiple sequence alignment - TraesCS4A01G192500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G192500 chr4A 100.000 4720 0 0 1 4720 472966902 472962183 0.000000e+00 8717.0
1 TraesCS4A01G192500 chr4A 89.720 321 21 1 4090 4410 509347263 509347571 2.650000e-107 399.0
2 TraesCS4A01G192500 chr4A 96.364 165 6 0 4486 4650 509347568 509347732 6.020000e-69 272.0
3 TraesCS4A01G192500 chr4D 91.417 2540 132 39 1515 4010 102143388 102145885 0.000000e+00 3404.0
4 TraesCS4A01G192500 chr4D 91.050 1162 41 28 353 1498 102141041 102142155 0.000000e+00 1511.0
5 TraesCS4A01G192500 chr4B 95.892 1412 43 5 2621 4026 146469671 146471073 0.000000e+00 2272.0
6 TraesCS4A01G192500 chr4B 92.502 1587 54 20 431 1994 146466994 146468538 0.000000e+00 2211.0
7 TraesCS4A01G192500 chr4B 82.226 557 53 19 2041 2584 146468671 146469194 5.610000e-119 438.0
8 TraesCS4A01G192500 chr4B 87.356 87 8 2 292 377 146466376 146466460 3.890000e-16 97.1
9 TraesCS4A01G192500 chr2A 95.230 566 10 4 4091 4650 139840651 139840097 0.000000e+00 880.0
10 TraesCS4A01G192500 chr2A 89.342 319 22 1 4092 4410 554081009 554081315 1.590000e-104 390.0
11 TraesCS4A01G192500 chr2A 87.234 188 24 0 4091 4278 139839000 139839187 1.030000e-51 215.0
12 TraesCS4A01G192500 chr2A 97.778 90 2 0 4486 4575 554081312 554081401 6.320000e-34 156.0
13 TraesCS4A01G192500 chr2A 94.505 91 5 0 4560 4650 554081417 554081507 1.770000e-29 141.0
14 TraesCS4A01G192500 chr6D 92.756 566 20 4 4091 4650 4358117 4357567 0.000000e+00 798.0
15 TraesCS4A01G192500 chr1B 90.476 567 35 7 4091 4650 205873655 205873101 0.000000e+00 730.0
16 TraesCS4A01G192500 chr1B 89.688 320 21 1 4091 4410 405180361 405180668 9.520000e-107 398.0
17 TraesCS4A01G192500 chr1B 96.364 165 6 0 4486 4650 405180665 405180829 6.020000e-69 272.0
18 TraesCS4A01G192500 chr2D 90.526 190 16 2 4090 4278 463885438 463885626 2.820000e-62 250.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G192500 chr4A 472962183 472966902 4719 True 8717.000 8717 100.0000 1 4720 1 chr4A.!!$R1 4719
1 TraesCS4A01G192500 chr4D 102141041 102145885 4844 False 2457.500 3404 91.2335 353 4010 2 chr4D.!!$F1 3657
2 TraesCS4A01G192500 chr4B 146466376 146471073 4697 False 1254.525 2272 89.4940 292 4026 4 chr4B.!!$F1 3734
3 TraesCS4A01G192500 chr2A 139840097 139840651 554 True 880.000 880 95.2300 4091 4650 1 chr2A.!!$R1 559
4 TraesCS4A01G192500 chr6D 4357567 4358117 550 True 798.000 798 92.7560 4091 4650 1 chr6D.!!$R1 559
5 TraesCS4A01G192500 chr1B 205873101 205873655 554 True 730.000 730 90.4760 4091 4650 1 chr1B.!!$R1 559

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
263 264 0.032130 ACTAGGCGCGTCCACATATG 59.968 55.0 19.3 0.00 37.29 1.78 F
264 265 0.032130 CTAGGCGCGTCCACATATGT 59.968 55.0 19.3 1.41 37.29 2.29 F
541 1040 0.033504 TCCCGAGCACAACTGTCTTC 59.966 55.0 0.0 0.00 0.00 2.87 F
542 1041 0.034059 CCCGAGCACAACTGTCTTCT 59.966 55.0 0.0 0.00 0.00 2.85 F
2152 4040 0.038892 GCATCCTGCACAACCAACAG 60.039 55.0 0.0 0.00 44.26 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2227 4115 1.017387 CTTAAATGCAGGCCCGAGTC 58.983 55.000 0.00 0.0 0.00 3.36 R
2232 4120 1.393603 GAGTCCTTAAATGCAGGCCC 58.606 55.000 0.00 0.0 0.00 5.80 R
2326 4220 1.404181 CGCTGCAGTATGTGTACAGGT 60.404 52.381 16.64 0.0 39.31 4.00 R
2361 4255 1.902508 CTAGTTGCAAGGGAGGTGAGA 59.097 52.381 0.00 0.0 0.00 3.27 R
4064 6407 0.037326 GGCTGACGTCACATTCTCCA 60.037 55.000 15.76 0.0 0.00 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.565305 GTCTGGCGCTTCTCATACTG 58.435 55.000 7.64 0.00 0.00 2.74
20 21 0.461548 TCTGGCGCTTCTCATACTGG 59.538 55.000 7.64 0.00 0.00 4.00
21 22 1.153369 TGGCGCTTCTCATACTGGC 60.153 57.895 7.64 0.00 0.00 4.85
22 23 1.889573 GGCGCTTCTCATACTGGCC 60.890 63.158 7.64 0.00 0.00 5.36
23 24 1.144936 GCGCTTCTCATACTGGCCT 59.855 57.895 3.32 0.00 0.00 5.19
24 25 0.878086 GCGCTTCTCATACTGGCCTC 60.878 60.000 3.32 0.00 0.00 4.70
25 26 0.596083 CGCTTCTCATACTGGCCTCG 60.596 60.000 3.32 0.00 0.00 4.63
26 27 0.461961 GCTTCTCATACTGGCCTCGT 59.538 55.000 3.32 3.60 0.00 4.18
27 28 1.681793 GCTTCTCATACTGGCCTCGTA 59.318 52.381 3.32 6.09 0.00 3.43
28 29 2.297597 GCTTCTCATACTGGCCTCGTAT 59.702 50.000 3.32 8.38 0.00 3.06
29 30 3.506455 GCTTCTCATACTGGCCTCGTATA 59.494 47.826 15.05 1.77 0.00 1.47
30 31 4.158764 GCTTCTCATACTGGCCTCGTATAT 59.841 45.833 15.05 0.00 0.00 0.86
31 32 5.644977 TTCTCATACTGGCCTCGTATATG 57.355 43.478 15.05 10.44 0.00 1.78
32 33 4.017126 TCTCATACTGGCCTCGTATATGG 58.983 47.826 15.05 9.88 0.00 2.74
33 34 3.096852 TCATACTGGCCTCGTATATGGG 58.903 50.000 15.05 6.33 0.00 4.00
34 35 2.984435 TACTGGCCTCGTATATGGGA 57.016 50.000 3.32 0.00 0.00 4.37
35 36 2.327325 ACTGGCCTCGTATATGGGAT 57.673 50.000 3.32 0.00 0.00 3.85
36 37 1.902508 ACTGGCCTCGTATATGGGATG 59.097 52.381 3.32 0.00 0.00 3.51
37 38 2.179427 CTGGCCTCGTATATGGGATGA 58.821 52.381 3.32 0.00 0.00 2.92
38 39 2.167281 CTGGCCTCGTATATGGGATGAG 59.833 54.545 3.32 0.00 0.00 2.90
39 40 2.180276 GGCCTCGTATATGGGATGAGT 58.820 52.381 0.00 0.00 0.00 3.41
40 41 2.166664 GGCCTCGTATATGGGATGAGTC 59.833 54.545 0.00 0.00 0.00 3.36
41 42 3.093057 GCCTCGTATATGGGATGAGTCT 58.907 50.000 0.00 0.00 0.00 3.24
42 43 3.119316 GCCTCGTATATGGGATGAGTCTG 60.119 52.174 0.00 0.00 0.00 3.51
43 44 4.336280 CCTCGTATATGGGATGAGTCTGA 58.664 47.826 0.00 0.00 0.00 3.27
44 45 4.767409 CCTCGTATATGGGATGAGTCTGAA 59.233 45.833 0.00 0.00 0.00 3.02
45 46 5.105957 CCTCGTATATGGGATGAGTCTGAAG 60.106 48.000 0.00 0.00 0.00 3.02
46 47 5.631119 TCGTATATGGGATGAGTCTGAAGA 58.369 41.667 0.00 0.00 0.00 2.87
47 48 5.707764 TCGTATATGGGATGAGTCTGAAGAG 59.292 44.000 0.00 0.00 0.00 2.85
48 49 5.475220 CGTATATGGGATGAGTCTGAAGAGT 59.525 44.000 0.00 0.00 0.00 3.24
49 50 5.804944 ATATGGGATGAGTCTGAAGAGTG 57.195 43.478 0.00 0.00 0.00 3.51
50 51 2.894731 TGGGATGAGTCTGAAGAGTGT 58.105 47.619 0.00 0.00 0.00 3.55
51 52 2.828520 TGGGATGAGTCTGAAGAGTGTC 59.171 50.000 0.00 0.00 0.00 3.67
52 53 2.828520 GGGATGAGTCTGAAGAGTGTCA 59.171 50.000 0.00 0.00 0.00 3.58
53 54 3.367910 GGGATGAGTCTGAAGAGTGTCAC 60.368 52.174 0.00 0.00 0.00 3.67
54 55 3.497118 GATGAGTCTGAAGAGTGTCACG 58.503 50.000 0.00 0.00 0.00 4.35
55 56 2.298610 TGAGTCTGAAGAGTGTCACGT 58.701 47.619 0.00 0.00 0.00 4.49
56 57 2.290916 TGAGTCTGAAGAGTGTCACGTC 59.709 50.000 0.00 0.00 0.00 4.34
57 58 2.290916 GAGTCTGAAGAGTGTCACGTCA 59.709 50.000 0.00 2.50 0.00 4.35
58 59 2.688446 AGTCTGAAGAGTGTCACGTCAA 59.312 45.455 0.00 0.00 0.00 3.18
59 60 3.319405 AGTCTGAAGAGTGTCACGTCAAT 59.681 43.478 0.00 0.00 0.00 2.57
60 61 3.426859 GTCTGAAGAGTGTCACGTCAATG 59.573 47.826 0.00 0.00 0.00 2.82
61 62 2.733552 CTGAAGAGTGTCACGTCAATGG 59.266 50.000 0.00 0.00 0.00 3.16
62 63 2.102420 TGAAGAGTGTCACGTCAATGGT 59.898 45.455 0.00 0.00 0.00 3.55
63 64 2.440539 AGAGTGTCACGTCAATGGTC 57.559 50.000 0.00 0.00 0.00 4.02
64 65 1.000955 AGAGTGTCACGTCAATGGTCC 59.999 52.381 0.00 0.00 0.00 4.46
65 66 1.000955 GAGTGTCACGTCAATGGTCCT 59.999 52.381 0.00 0.00 0.00 3.85
66 67 1.148310 GTGTCACGTCAATGGTCCTG 58.852 55.000 0.00 0.00 0.00 3.86
67 68 0.602638 TGTCACGTCAATGGTCCTGC 60.603 55.000 0.00 0.00 0.00 4.85
68 69 1.374125 TCACGTCAATGGTCCTGCG 60.374 57.895 0.00 0.00 0.00 5.18
69 70 2.742372 ACGTCAATGGTCCTGCGC 60.742 61.111 0.00 0.00 0.00 6.09
70 71 3.499737 CGTCAATGGTCCTGCGCC 61.500 66.667 4.18 0.00 0.00 6.53
71 72 3.134127 GTCAATGGTCCTGCGCCC 61.134 66.667 4.18 0.00 0.00 6.13
72 73 4.776322 TCAATGGTCCTGCGCCCG 62.776 66.667 4.18 0.00 0.00 6.13
85 86 3.276846 GCCCGCCGCGTATGATTT 61.277 61.111 12.58 0.00 0.00 2.17
86 87 2.631428 CCCGCCGCGTATGATTTG 59.369 61.111 12.58 0.00 0.00 2.32
87 88 1.885388 CCCGCCGCGTATGATTTGA 60.885 57.895 12.58 0.00 0.00 2.69
88 89 1.275657 CCGCCGCGTATGATTTGAC 59.724 57.895 12.58 0.00 0.00 3.18
89 90 1.275657 CGCCGCGTATGATTTGACC 59.724 57.895 4.92 0.00 0.00 4.02
90 91 1.647084 GCCGCGTATGATTTGACCC 59.353 57.895 4.92 0.00 0.00 4.46
91 92 1.092921 GCCGCGTATGATTTGACCCA 61.093 55.000 4.92 0.00 0.00 4.51
92 93 0.655733 CCGCGTATGATTTGACCCAC 59.344 55.000 4.92 0.00 0.00 4.61
93 94 0.655733 CGCGTATGATTTGACCCACC 59.344 55.000 0.00 0.00 0.00 4.61
94 95 1.745232 GCGTATGATTTGACCCACCA 58.255 50.000 0.00 0.00 0.00 4.17
95 96 1.400494 GCGTATGATTTGACCCACCAC 59.600 52.381 0.00 0.00 0.00 4.16
96 97 1.663643 CGTATGATTTGACCCACCACG 59.336 52.381 0.00 0.00 0.00 4.94
97 98 2.014128 GTATGATTTGACCCACCACGG 58.986 52.381 0.00 0.00 0.00 4.94
98 99 0.695924 ATGATTTGACCCACCACGGA 59.304 50.000 0.00 0.00 36.56 4.69
99 100 0.036164 TGATTTGACCCACCACGGAG 59.964 55.000 0.00 0.00 36.56 4.63
100 101 1.303317 ATTTGACCCACCACGGAGC 60.303 57.895 0.00 0.00 36.56 4.70
101 102 2.063015 ATTTGACCCACCACGGAGCA 62.063 55.000 0.00 0.00 36.56 4.26
102 103 2.063015 TTTGACCCACCACGGAGCAT 62.063 55.000 0.00 0.00 36.56 3.79
103 104 2.125106 GACCCACCACGGAGCATC 60.125 66.667 0.00 0.00 36.56 3.91
146 147 9.868160 TTATTTCTTTTCTTTCCCTCTCTTTCT 57.132 29.630 0.00 0.00 0.00 2.52
147 148 8.774546 ATTTCTTTTCTTTCCCTCTCTTTCTT 57.225 30.769 0.00 0.00 0.00 2.52
148 149 7.809546 TTCTTTTCTTTCCCTCTCTTTCTTC 57.190 36.000 0.00 0.00 0.00 2.87
149 150 6.900194 TCTTTTCTTTCCCTCTCTTTCTTCA 58.100 36.000 0.00 0.00 0.00 3.02
150 151 6.768381 TCTTTTCTTTCCCTCTCTTTCTTCAC 59.232 38.462 0.00 0.00 0.00 3.18
151 152 4.625607 TCTTTCCCTCTCTTTCTTCACC 57.374 45.455 0.00 0.00 0.00 4.02
152 153 3.973973 TCTTTCCCTCTCTTTCTTCACCA 59.026 43.478 0.00 0.00 0.00 4.17
153 154 4.412199 TCTTTCCCTCTCTTTCTTCACCAA 59.588 41.667 0.00 0.00 0.00 3.67
154 155 5.073691 TCTTTCCCTCTCTTTCTTCACCAAT 59.926 40.000 0.00 0.00 0.00 3.16
155 156 4.559862 TCCCTCTCTTTCTTCACCAATC 57.440 45.455 0.00 0.00 0.00 2.67
156 157 3.909995 TCCCTCTCTTTCTTCACCAATCA 59.090 43.478 0.00 0.00 0.00 2.57
157 158 4.537688 TCCCTCTCTTTCTTCACCAATCAT 59.462 41.667 0.00 0.00 0.00 2.45
158 159 5.726308 TCCCTCTCTTTCTTCACCAATCATA 59.274 40.000 0.00 0.00 0.00 2.15
159 160 6.388100 TCCCTCTCTTTCTTCACCAATCATAT 59.612 38.462 0.00 0.00 0.00 1.78
160 161 6.485984 CCCTCTCTTTCTTCACCAATCATATG 59.514 42.308 0.00 0.00 0.00 1.78
161 162 6.017275 CCTCTCTTTCTTCACCAATCATATGC 60.017 42.308 0.00 0.00 0.00 3.14
162 163 6.417258 TCTCTTTCTTCACCAATCATATGCA 58.583 36.000 0.00 0.00 0.00 3.96
163 164 7.058525 TCTCTTTCTTCACCAATCATATGCAT 58.941 34.615 3.79 3.79 0.00 3.96
164 165 7.012989 TCTCTTTCTTCACCAATCATATGCATG 59.987 37.037 10.16 0.00 0.00 4.06
165 166 6.604396 TCTTTCTTCACCAATCATATGCATGT 59.396 34.615 10.16 0.00 33.57 3.21
166 167 5.761165 TCTTCACCAATCATATGCATGTG 57.239 39.130 16.69 16.69 33.57 3.21
167 168 5.438833 TCTTCACCAATCATATGCATGTGA 58.561 37.500 25.76 25.76 33.57 3.58
168 169 5.529800 TCTTCACCAATCATATGCATGTGAG 59.470 40.000 27.00 17.74 31.39 3.51
169 170 3.566742 TCACCAATCATATGCATGTGAGC 59.433 43.478 27.00 0.00 31.39 4.26
170 171 2.551032 ACCAATCATATGCATGTGAGCG 59.449 45.455 27.00 20.24 37.31 5.03
171 172 2.551032 CCAATCATATGCATGTGAGCGT 59.449 45.455 27.00 14.57 37.31 5.07
172 173 3.747529 CCAATCATATGCATGTGAGCGTA 59.252 43.478 27.00 8.07 40.03 4.42
173 174 4.377738 CCAATCATATGCATGTGAGCGTAC 60.378 45.833 27.00 0.00 38.69 3.67
174 175 2.754472 TCATATGCATGTGAGCGTACC 58.246 47.619 20.85 0.00 38.69 3.34
175 176 2.365293 TCATATGCATGTGAGCGTACCT 59.635 45.455 20.85 0.00 38.69 3.08
176 177 3.572255 TCATATGCATGTGAGCGTACCTA 59.428 43.478 20.85 0.00 38.69 3.08
177 178 4.220602 TCATATGCATGTGAGCGTACCTAT 59.779 41.667 20.85 0.00 38.69 2.57
178 179 5.417580 TCATATGCATGTGAGCGTACCTATA 59.582 40.000 20.85 0.00 38.69 1.31
179 180 4.600692 ATGCATGTGAGCGTACCTATAA 57.399 40.909 0.00 0.00 37.31 0.98
180 181 4.394439 TGCATGTGAGCGTACCTATAAA 57.606 40.909 0.00 0.00 37.31 1.40
181 182 4.368315 TGCATGTGAGCGTACCTATAAAG 58.632 43.478 0.00 0.00 37.31 1.85
182 183 4.098807 TGCATGTGAGCGTACCTATAAAGA 59.901 41.667 0.00 0.00 37.31 2.52
183 184 5.047847 GCATGTGAGCGTACCTATAAAGAA 58.952 41.667 0.00 0.00 0.00 2.52
184 185 5.522460 GCATGTGAGCGTACCTATAAAGAAA 59.478 40.000 0.00 0.00 0.00 2.52
185 186 6.036735 GCATGTGAGCGTACCTATAAAGAAAA 59.963 38.462 0.00 0.00 0.00 2.29
186 187 7.413657 GCATGTGAGCGTACCTATAAAGAAAAA 60.414 37.037 0.00 0.00 0.00 1.94
208 209 8.579682 AAAAAGTGAAAAATATGAGTGCAGAC 57.420 30.769 0.00 0.00 0.00 3.51
209 210 6.882610 AAGTGAAAAATATGAGTGCAGACA 57.117 33.333 0.00 0.00 0.00 3.41
210 211 6.882610 AGTGAAAAATATGAGTGCAGACAA 57.117 33.333 0.00 0.00 0.00 3.18
211 212 7.275888 AGTGAAAAATATGAGTGCAGACAAA 57.724 32.000 0.00 0.00 0.00 2.83
212 213 7.889469 AGTGAAAAATATGAGTGCAGACAAAT 58.111 30.769 0.00 0.00 0.00 2.32
213 214 9.013229 AGTGAAAAATATGAGTGCAGACAAATA 57.987 29.630 0.00 0.00 0.00 1.40
214 215 9.282247 GTGAAAAATATGAGTGCAGACAAATAG 57.718 33.333 0.00 0.00 0.00 1.73
215 216 8.461222 TGAAAAATATGAGTGCAGACAAATAGG 58.539 33.333 0.00 0.00 0.00 2.57
216 217 8.579850 AAAAATATGAGTGCAGACAAATAGGA 57.420 30.769 0.00 0.00 0.00 2.94
217 218 8.579850 AAAATATGAGTGCAGACAAATAGGAA 57.420 30.769 0.00 0.00 0.00 3.36
218 219 7.798596 AATATGAGTGCAGACAAATAGGAAG 57.201 36.000 0.00 0.00 0.00 3.46
219 220 4.623932 TGAGTGCAGACAAATAGGAAGT 57.376 40.909 0.00 0.00 0.00 3.01
220 221 4.569943 TGAGTGCAGACAAATAGGAAGTC 58.430 43.478 0.00 0.00 0.00 3.01
221 222 4.040339 TGAGTGCAGACAAATAGGAAGTCA 59.960 41.667 0.00 0.00 34.80 3.41
222 223 4.973168 AGTGCAGACAAATAGGAAGTCAA 58.027 39.130 0.00 0.00 34.80 3.18
223 224 5.376625 AGTGCAGACAAATAGGAAGTCAAA 58.623 37.500 0.00 0.00 34.80 2.69
224 225 5.827797 AGTGCAGACAAATAGGAAGTCAAAA 59.172 36.000 0.00 0.00 34.80 2.44
225 226 5.915196 GTGCAGACAAATAGGAAGTCAAAAC 59.085 40.000 0.00 0.00 34.80 2.43
226 227 5.592282 TGCAGACAAATAGGAAGTCAAAACA 59.408 36.000 0.00 0.00 34.80 2.83
227 228 6.096141 TGCAGACAAATAGGAAGTCAAAACAA 59.904 34.615 0.00 0.00 34.80 2.83
228 229 6.978080 GCAGACAAATAGGAAGTCAAAACAAA 59.022 34.615 0.00 0.00 34.80 2.83
229 230 7.043391 GCAGACAAATAGGAAGTCAAAACAAAC 60.043 37.037 0.00 0.00 34.80 2.93
230 231 7.973388 CAGACAAATAGGAAGTCAAAACAAACA 59.027 33.333 0.00 0.00 34.80 2.83
231 232 7.973944 AGACAAATAGGAAGTCAAAACAAACAC 59.026 33.333 0.00 0.00 34.80 3.32
232 233 7.607250 ACAAATAGGAAGTCAAAACAAACACA 58.393 30.769 0.00 0.00 0.00 3.72
233 234 8.257306 ACAAATAGGAAGTCAAAACAAACACAT 58.743 29.630 0.00 0.00 0.00 3.21
234 235 8.755018 CAAATAGGAAGTCAAAACAAACACATC 58.245 33.333 0.00 0.00 0.00 3.06
235 236 5.262588 AGGAAGTCAAAACAAACACATCC 57.737 39.130 0.00 0.00 0.00 3.51
236 237 4.041723 GGAAGTCAAAACAAACACATCCG 58.958 43.478 0.00 0.00 0.00 4.18
237 238 3.708563 AGTCAAAACAAACACATCCGG 57.291 42.857 0.00 0.00 0.00 5.14
238 239 3.283751 AGTCAAAACAAACACATCCGGA 58.716 40.909 6.61 6.61 0.00 5.14
239 240 3.888930 AGTCAAAACAAACACATCCGGAT 59.111 39.130 12.38 12.38 0.00 4.18
240 241 5.067273 AGTCAAAACAAACACATCCGGATA 58.933 37.500 18.63 0.00 0.00 2.59
241 242 5.048991 AGTCAAAACAAACACATCCGGATAC 60.049 40.000 18.63 6.84 0.00 2.24
242 243 5.048991 GTCAAAACAAACACATCCGGATACT 60.049 40.000 18.63 1.75 0.00 2.12
243 244 6.148150 GTCAAAACAAACACATCCGGATACTA 59.852 38.462 18.63 0.00 0.00 1.82
244 245 6.711194 TCAAAACAAACACATCCGGATACTAA 59.289 34.615 18.63 0.00 0.00 2.24
245 246 6.490566 AAACAAACACATCCGGATACTAAC 57.509 37.500 18.63 0.00 0.00 2.34
246 247 5.416271 ACAAACACATCCGGATACTAACT 57.584 39.130 18.63 0.00 0.00 2.24
247 248 6.534475 ACAAACACATCCGGATACTAACTA 57.466 37.500 18.63 0.00 0.00 2.24
248 249 6.570692 ACAAACACATCCGGATACTAACTAG 58.429 40.000 18.63 4.48 0.00 2.57
249 250 5.786264 AACACATCCGGATACTAACTAGG 57.214 43.478 18.63 3.68 0.00 3.02
250 251 3.573110 ACACATCCGGATACTAACTAGGC 59.427 47.826 18.63 0.00 0.00 3.93
251 252 2.818432 ACATCCGGATACTAACTAGGCG 59.182 50.000 18.63 2.30 0.00 5.52
252 253 1.242076 TCCGGATACTAACTAGGCGC 58.758 55.000 0.00 0.00 0.00 6.53
253 254 0.109873 CCGGATACTAACTAGGCGCG 60.110 60.000 0.00 0.00 0.00 6.86
254 255 0.590195 CGGATACTAACTAGGCGCGT 59.410 55.000 8.43 8.08 0.00 6.01
255 256 1.399471 CGGATACTAACTAGGCGCGTC 60.399 57.143 5.57 0.21 0.00 5.19
256 257 1.068679 GGATACTAACTAGGCGCGTCC 60.069 57.143 7.31 9.59 0.00 4.79
257 258 1.605710 GATACTAACTAGGCGCGTCCA 59.394 52.381 19.30 0.00 37.29 4.02
258 259 0.734889 TACTAACTAGGCGCGTCCAC 59.265 55.000 19.30 3.57 37.29 4.02
259 260 1.246056 ACTAACTAGGCGCGTCCACA 61.246 55.000 19.30 7.73 37.29 4.17
260 261 0.102481 CTAACTAGGCGCGTCCACAT 59.898 55.000 19.30 0.00 37.29 3.21
261 262 1.335810 CTAACTAGGCGCGTCCACATA 59.664 52.381 19.30 0.00 37.29 2.29
262 263 0.750850 AACTAGGCGCGTCCACATAT 59.249 50.000 19.30 0.00 37.29 1.78
263 264 0.032130 ACTAGGCGCGTCCACATATG 59.968 55.000 19.30 0.00 37.29 1.78
264 265 0.032130 CTAGGCGCGTCCACATATGT 59.968 55.000 19.30 1.41 37.29 2.29
265 266 0.462375 TAGGCGCGTCCACATATGTT 59.538 50.000 19.30 0.00 37.29 2.71
266 267 0.392461 AGGCGCGTCCACATATGTTT 60.392 50.000 19.30 0.00 37.29 2.83
267 268 0.248054 GGCGCGTCCACATATGTTTG 60.248 55.000 8.43 0.43 34.01 2.93
268 269 0.724549 GCGCGTCCACATATGTTTGA 59.275 50.000 8.43 3.10 0.00 2.69
269 270 1.267532 GCGCGTCCACATATGTTTGAG 60.268 52.381 8.43 0.00 0.00 3.02
270 271 1.327460 CGCGTCCACATATGTTTGAGG 59.673 52.381 5.37 12.10 0.00 3.86
271 272 1.670811 GCGTCCACATATGTTTGAGGG 59.329 52.381 18.99 12.55 0.00 4.30
272 273 1.670811 CGTCCACATATGTTTGAGGGC 59.329 52.381 5.37 5.02 0.00 5.19
273 274 2.024414 GTCCACATATGTTTGAGGGCC 58.976 52.381 5.37 0.00 0.00 5.80
274 275 1.024271 CCACATATGTTTGAGGGCCG 58.976 55.000 5.37 0.00 0.00 6.13
275 276 0.381801 CACATATGTTTGAGGGCCGC 59.618 55.000 5.37 0.00 0.00 6.53
276 277 0.751643 ACATATGTTTGAGGGCCGCC 60.752 55.000 4.35 0.00 0.00 6.13
277 278 1.152756 ATATGTTTGAGGGCCGCCC 60.153 57.895 22.09 22.09 45.90 6.13
299 300 4.603946 GGACGGCCGTAGATGCCC 62.604 72.222 34.36 23.42 46.48 5.36
300 301 4.603946 GACGGCCGTAGATGCCCC 62.604 72.222 34.36 12.75 46.48 5.80
302 303 4.169696 CGGCCGTAGATGCCCCAA 62.170 66.667 19.50 0.00 46.48 4.12
303 304 2.274104 GGCCGTAGATGCCCCAAA 59.726 61.111 0.00 0.00 43.33 3.28
304 305 1.379309 GGCCGTAGATGCCCCAAAA 60.379 57.895 0.00 0.00 43.33 2.44
305 306 1.384222 GGCCGTAGATGCCCCAAAAG 61.384 60.000 0.00 0.00 43.33 2.27
306 307 0.393808 GCCGTAGATGCCCCAAAAGA 60.394 55.000 0.00 0.00 0.00 2.52
307 308 1.953311 GCCGTAGATGCCCCAAAAGAA 60.953 52.381 0.00 0.00 0.00 2.52
308 309 2.442413 CCGTAGATGCCCCAAAAGAAA 58.558 47.619 0.00 0.00 0.00 2.52
309 310 3.023832 CCGTAGATGCCCCAAAAGAAAT 58.976 45.455 0.00 0.00 0.00 2.17
319 320 6.078664 TGCCCCAAAAGAAATAAGAACCTAA 58.921 36.000 0.00 0.00 0.00 2.69
320 321 6.014925 TGCCCCAAAAGAAATAAGAACCTAAC 60.015 38.462 0.00 0.00 0.00 2.34
350 351 6.625873 ACTGAAAAATGAAAGGAGTGAGTC 57.374 37.500 0.00 0.00 0.00 3.36
351 352 6.360618 ACTGAAAAATGAAAGGAGTGAGTCT 58.639 36.000 0.00 0.00 0.00 3.24
441 929 2.431057 GACGAGAGAGAGAGAGAGGAGT 59.569 54.545 0.00 0.00 0.00 3.85
445 933 4.443457 CGAGAGAGAGAGAGAGGAGTGAAT 60.443 50.000 0.00 0.00 0.00 2.57
462 950 0.988832 AATCCTTGGGTGACGGCTAA 59.011 50.000 0.00 0.00 0.00 3.09
541 1040 0.033504 TCCCGAGCACAACTGTCTTC 59.966 55.000 0.00 0.00 0.00 2.87
542 1041 0.034059 CCCGAGCACAACTGTCTTCT 59.966 55.000 0.00 0.00 0.00 2.85
543 1042 1.541233 CCCGAGCACAACTGTCTTCTT 60.541 52.381 0.00 0.00 0.00 2.52
544 1043 1.795286 CCGAGCACAACTGTCTTCTTC 59.205 52.381 0.00 0.00 0.00 2.87
545 1044 1.795286 CGAGCACAACTGTCTTCTTCC 59.205 52.381 0.00 0.00 0.00 3.46
546 1045 2.803133 CGAGCACAACTGTCTTCTTCCA 60.803 50.000 0.00 0.00 0.00 3.53
547 1046 2.545946 GAGCACAACTGTCTTCTTCCAC 59.454 50.000 0.00 0.00 0.00 4.02
548 1047 2.092968 AGCACAACTGTCTTCTTCCACA 60.093 45.455 0.00 0.00 0.00 4.17
549 1048 2.880890 GCACAACTGTCTTCTTCCACAT 59.119 45.455 0.00 0.00 0.00 3.21
591 1094 3.450457 ACTAGAAACAGCAGAGCATAGCT 59.550 43.478 0.00 0.00 43.88 3.32
592 1095 4.646945 ACTAGAAACAGCAGAGCATAGCTA 59.353 41.667 0.00 0.00 39.88 3.32
593 1096 4.057406 AGAAACAGCAGAGCATAGCTAG 57.943 45.455 0.00 0.00 39.88 3.42
594 1097 2.237393 AACAGCAGAGCATAGCTAGC 57.763 50.000 6.62 6.62 39.88 3.42
648 1159 1.205655 AGATACAGACTGTGCGTGCAT 59.794 47.619 18.58 2.04 0.00 3.96
649 1160 1.590238 GATACAGACTGTGCGTGCATC 59.410 52.381 18.58 8.06 0.00 3.91
650 1161 0.389817 TACAGACTGTGCGTGCATCC 60.390 55.000 18.58 0.00 0.00 3.51
651 1162 1.375140 CAGACTGTGCGTGCATCCT 60.375 57.895 0.00 0.00 0.00 3.24
735 1264 4.166378 ATCCCGTCCCGATCCCCA 62.166 66.667 0.00 0.00 0.00 4.96
740 1269 3.006728 GTCCCGATCCCCACACCA 61.007 66.667 0.00 0.00 0.00 4.17
895 1424 1.562575 GGTGCGTACCCAGTTTGTCG 61.563 60.000 12.25 0.00 41.36 4.35
932 1461 0.476611 AAGCTCCTCCCACCCTCTTT 60.477 55.000 0.00 0.00 0.00 2.52
946 1475 4.578105 CACCCTCTTTCTATCCATTTCTGC 59.422 45.833 0.00 0.00 0.00 4.26
964 1493 1.276145 GCGATCGATCTAACCCACGC 61.276 60.000 21.57 14.90 38.23 5.34
967 1496 0.311165 ATCGATCTAACCCACGCGAG 59.689 55.000 15.93 4.16 0.00 5.03
972 1501 1.883084 CTAACCCACGCGAGCATCC 60.883 63.158 15.93 0.00 0.00 3.51
984 1513 4.925861 GCATCCCCGGCTGCTCTC 62.926 72.222 12.92 0.00 34.78 3.20
985 1514 4.247380 CATCCCCGGCTGCTCTCC 62.247 72.222 0.00 0.00 0.00 3.71
1016 1545 2.048690 GATGGATCTCCTCGCGGC 60.049 66.667 6.13 0.00 36.82 6.53
1093 1622 4.779733 TCAGGGTCCTCCTCGGCC 62.780 72.222 0.00 0.00 46.12 6.13
1491 2020 4.619679 AGGTCAGCTCTATTCTCTTCCTT 58.380 43.478 0.00 0.00 0.00 3.36
1492 2021 4.649218 AGGTCAGCTCTATTCTCTTCCTTC 59.351 45.833 0.00 0.00 0.00 3.46
1493 2022 4.202212 GGTCAGCTCTATTCTCTTCCTTCC 60.202 50.000 0.00 0.00 0.00 3.46
1494 2023 4.649218 GTCAGCTCTATTCTCTTCCTTCCT 59.351 45.833 0.00 0.00 0.00 3.36
1557 3306 3.569701 TCTTCTTGGGTTTGAATGAGTGC 59.430 43.478 0.00 0.00 0.00 4.40
1576 3325 3.114606 TGCATCATAGTCAGAGGGGAAA 58.885 45.455 0.00 0.00 0.00 3.13
1579 3328 4.626287 GCATCATAGTCAGAGGGGAAAACA 60.626 45.833 0.00 0.00 0.00 2.83
1587 3336 2.290641 CAGAGGGGAAAACAACACTTCG 59.709 50.000 0.00 0.00 0.00 3.79
1599 3348 6.431198 AACAACACTTCGTATGTGACTTTT 57.569 33.333 10.87 0.00 38.65 2.27
1619 3374 8.154649 ACTTTTTATCCTTACTATGGAATGCG 57.845 34.615 0.00 0.00 37.13 4.73
1678 3433 7.867403 CCTAATTTGCCGATGCTTATGTTAATT 59.133 33.333 0.00 0.00 38.71 1.40
1718 3474 3.181472 GGGATTTTGATGATTCCAGTGGC 60.181 47.826 3.51 0.00 0.00 5.01
1739 3495 1.204704 CTGCTCGGTCACCAGTATTCA 59.795 52.381 0.00 0.00 0.00 2.57
1881 3645 4.189639 ACCGTGGTGAGTAAGAGAAATC 57.810 45.455 0.00 0.00 0.00 2.17
1902 3666 2.563427 GCTTGCGGCAAGTTCTCC 59.437 61.111 35.23 19.66 42.77 3.71
1914 3678 6.046593 CGGCAAGTTCTCCAATACAATAGTA 58.953 40.000 0.00 0.00 34.10 1.82
1947 3711 8.494016 AGTACCATAACTGAAGCTTGTTATTC 57.506 34.615 15.83 9.39 37.29 1.75
1952 3716 5.695851 AACTGAAGCTTGTTATTCCAGTG 57.304 39.130 2.10 0.00 0.00 3.66
1954 3718 2.819608 TGAAGCTTGTTATTCCAGTGCC 59.180 45.455 2.10 0.00 0.00 5.01
1955 3719 2.887151 AGCTTGTTATTCCAGTGCCT 57.113 45.000 0.00 0.00 0.00 4.75
1956 3720 4.261801 GAAGCTTGTTATTCCAGTGCCTA 58.738 43.478 2.10 0.00 0.00 3.93
1957 3721 3.878778 AGCTTGTTATTCCAGTGCCTAG 58.121 45.455 0.00 0.00 0.00 3.02
1958 3722 3.264450 AGCTTGTTATTCCAGTGCCTAGT 59.736 43.478 0.00 0.00 0.00 2.57
1959 3723 4.010349 GCTTGTTATTCCAGTGCCTAGTT 58.990 43.478 0.00 0.00 0.00 2.24
1960 3724 4.142600 GCTTGTTATTCCAGTGCCTAGTTG 60.143 45.833 0.00 0.00 0.00 3.16
1961 3725 3.950397 TGTTATTCCAGTGCCTAGTTGG 58.050 45.455 0.00 0.00 39.35 3.77
1995 3759 5.180868 TGTTTTGCAAGCATTTTTGTGTCTT 59.819 32.000 0.00 0.00 0.00 3.01
1996 3760 5.876612 TTTGCAAGCATTTTTGTGTCTTT 57.123 30.435 0.00 0.00 0.00 2.52
1997 3761 5.876612 TTGCAAGCATTTTTGTGTCTTTT 57.123 30.435 0.00 0.00 0.00 2.27
1998 3762 5.876612 TGCAAGCATTTTTGTGTCTTTTT 57.123 30.435 0.00 0.00 0.00 1.94
2028 3792 5.105392 AGCATTTTTGTGTCTGAAAGGTGAA 60.105 36.000 0.00 0.00 0.00 3.18
2033 3797 9.883142 ATTTTTGTGTCTGAAAGGTGAAAATTA 57.117 25.926 0.00 0.00 0.00 1.40
2034 3798 9.883142 TTTTTGTGTCTGAAAGGTGAAAATTAT 57.117 25.926 0.00 0.00 0.00 1.28
2035 3799 8.870160 TTTGTGTCTGAAAGGTGAAAATTATG 57.130 30.769 0.00 0.00 0.00 1.90
2036 3800 7.815840 TGTGTCTGAAAGGTGAAAATTATGA 57.184 32.000 0.00 0.00 0.00 2.15
2037 3801 8.408043 TGTGTCTGAAAGGTGAAAATTATGAT 57.592 30.769 0.00 0.00 0.00 2.45
2038 3802 9.513906 TGTGTCTGAAAGGTGAAAATTATGATA 57.486 29.630 0.00 0.00 0.00 2.15
2079 3954 5.304357 TCACAGTGTCAACCATTTCTCTCTA 59.696 40.000 0.00 0.00 0.00 2.43
2081 3961 6.091849 CACAGTGTCAACCATTTCTCTCTATG 59.908 42.308 0.00 0.00 0.00 2.23
2082 3962 6.169094 CAGTGTCAACCATTTCTCTCTATGT 58.831 40.000 0.00 0.00 0.00 2.29
2101 3981 7.868775 TCTATGTAAGTAGCATTTATCGTCGT 58.131 34.615 0.00 0.00 0.00 4.34
2109 3989 9.525409 AAGTAGCATTTATCGTCGTAGTTTATT 57.475 29.630 0.00 0.00 0.00 1.40
2110 3990 8.965172 AGTAGCATTTATCGTCGTAGTTTATTG 58.035 33.333 0.00 0.00 0.00 1.90
2112 3992 8.415192 AGCATTTATCGTCGTAGTTTATTGAA 57.585 30.769 0.00 0.00 0.00 2.69
2152 4040 0.038892 GCATCCTGCACAACCAACAG 60.039 55.000 0.00 0.00 44.26 3.16
2156 4044 1.648720 CTGCACAACCAACAGTCGG 59.351 57.895 0.00 0.00 0.00 4.79
2158 4046 1.092921 TGCACAACCAACAGTCGGTC 61.093 55.000 0.00 0.00 34.99 4.79
2168 4056 3.243771 CCAACAGTCGGTCTAACTTGTCT 60.244 47.826 0.00 0.00 0.00 3.41
2183 4071 5.186996 ACTTGTCTTGCAAAGTTGTATGG 57.813 39.130 0.00 0.00 46.34 2.74
2184 4072 4.887071 ACTTGTCTTGCAAAGTTGTATGGA 59.113 37.500 0.00 0.00 46.34 3.41
2185 4073 5.359576 ACTTGTCTTGCAAAGTTGTATGGAA 59.640 36.000 0.00 0.00 46.34 3.53
2186 4074 5.843673 TGTCTTGCAAAGTTGTATGGAAA 57.156 34.783 0.00 0.00 46.34 3.13
2187 4075 6.403866 TGTCTTGCAAAGTTGTATGGAAAT 57.596 33.333 0.00 0.00 46.34 2.17
2188 4076 6.215121 TGTCTTGCAAAGTTGTATGGAAATG 58.785 36.000 0.00 0.00 46.34 2.32
2216 4104 3.188048 GTGCACTTCTGATCAGAACCTTG 59.812 47.826 30.05 25.32 42.06 3.61
2227 4115 6.738114 TGATCAGAACCTTGTAAAAAGCTTG 58.262 36.000 0.00 0.00 0.00 4.01
2232 4120 4.813296 ACCTTGTAAAAAGCTTGACTCG 57.187 40.909 0.00 0.00 0.00 4.18
2234 4122 3.058224 CCTTGTAAAAAGCTTGACTCGGG 60.058 47.826 0.00 0.00 0.00 5.14
2253 4141 1.064389 GGCCTGCATTTAAGGACTCCT 60.064 52.381 0.00 0.00 40.03 3.69
2264 4152 3.528597 AAGGACTCCTTATGAACTCGC 57.471 47.619 8.73 0.00 42.74 5.03
2282 4170 1.331756 CGCTGCTGAAACAGAACAAGT 59.668 47.619 2.81 0.00 40.25 3.16
2326 4220 6.937465 TGAACAGCATGGTTTGTTAGTATACA 59.063 34.615 5.50 0.00 33.00 2.29
2438 4332 7.759489 ATGACAAGGTTTGCTACATTTTCTA 57.241 32.000 5.27 0.00 30.65 2.10
2532 4428 5.138125 AGAGTTTGCACAAATAACATGGG 57.862 39.130 0.00 0.00 32.36 4.00
2540 4436 5.105797 TGCACAAATAACATGGGTCATCTTC 60.106 40.000 0.00 0.00 0.00 2.87
2669 5005 3.998341 TGTATAGGTTCGTTTGTTCTGGC 59.002 43.478 0.00 0.00 0.00 4.85
2972 5309 2.586357 GCGGAGATCTTCGCCACC 60.586 66.667 33.92 11.29 45.42 4.61
3158 5495 2.689034 ACTGGGGCCTACCTGCTC 60.689 66.667 0.84 0.00 40.03 4.26
3188 5525 2.612972 GCAGTACTTTGCAGAGGCTGTA 60.613 50.000 22.54 2.55 43.53 2.74
3470 5807 3.047877 GACCCTGACCGGTTTGCG 61.048 66.667 9.42 0.00 35.79 4.85
3632 5969 2.584391 GCTGGTCTCACCGTTCCCT 61.584 63.158 0.00 0.00 42.58 4.20
3677 6014 2.908015 GGCATCAAGGGCGAGGTA 59.092 61.111 0.00 0.00 0.00 3.08
3767 6104 3.572255 TGGGGTGTTTGCTTCTGTATTTC 59.428 43.478 0.00 0.00 0.00 2.17
3777 6114 9.129209 GTTTGCTTCTGTATTTCTTCCATTTAC 57.871 33.333 0.00 0.00 0.00 2.01
3862 6203 5.098211 GTGATTTGCTTCCAGTGATTTAGC 58.902 41.667 0.00 0.00 0.00 3.09
3874 6215 3.118775 AGTGATTTAGCCGTGTAGCATCA 60.119 43.478 0.00 0.00 34.23 3.07
3877 6218 3.603158 TTTAGCCGTGTAGCATCAGAA 57.397 42.857 0.00 0.00 34.23 3.02
3890 6231 6.712095 TGTAGCATCAGAATGTTGTTTCTCTT 59.288 34.615 0.00 0.00 38.07 2.85
3908 6249 5.380043 TCTCTTTCCTTTCATCTTTGCTGT 58.620 37.500 0.00 0.00 0.00 4.40
3915 6256 3.988379 TTCATCTTTGCTGTTGTCCAC 57.012 42.857 0.00 0.00 0.00 4.02
3956 6297 7.281999 TCAGACATAAAATGTGAACAGACAACA 59.718 33.333 0.00 0.00 45.03 3.33
4001 6344 5.042593 TGTGACAGTTCATTCAAAATGCAC 58.957 37.500 0.00 0.00 34.71 4.57
4029 6372 4.229876 GCTTTTGCTCACTGAAATGTACC 58.770 43.478 0.00 0.00 43.35 3.34
4030 6373 4.022849 GCTTTTGCTCACTGAAATGTACCT 60.023 41.667 0.00 0.00 43.35 3.08
4031 6374 5.507985 GCTTTTGCTCACTGAAATGTACCTT 60.508 40.000 0.00 0.00 43.35 3.50
4032 6375 6.463995 TTTTGCTCACTGAAATGTACCTTT 57.536 33.333 0.00 0.00 0.00 3.11
4033 6376 5.437289 TTGCTCACTGAAATGTACCTTTG 57.563 39.130 0.46 0.00 0.00 2.77
4034 6377 4.460263 TGCTCACTGAAATGTACCTTTGT 58.540 39.130 0.46 0.00 0.00 2.83
4035 6378 4.275689 TGCTCACTGAAATGTACCTTTGTG 59.724 41.667 0.46 4.69 0.00 3.33
4036 6379 4.275936 GCTCACTGAAATGTACCTTTGTGT 59.724 41.667 0.46 0.00 0.00 3.72
4037 6380 5.468746 GCTCACTGAAATGTACCTTTGTGTA 59.531 40.000 0.46 0.00 0.00 2.90
4038 6381 6.149474 GCTCACTGAAATGTACCTTTGTGTAT 59.851 38.462 0.46 0.00 0.00 2.29
4039 6382 7.308589 GCTCACTGAAATGTACCTTTGTGTATT 60.309 37.037 0.46 0.00 0.00 1.89
4040 6383 9.214957 CTCACTGAAATGTACCTTTGTGTATTA 57.785 33.333 0.46 0.00 0.00 0.98
4041 6384 8.995220 TCACTGAAATGTACCTTTGTGTATTAC 58.005 33.333 0.46 0.00 0.00 1.89
4042 6385 8.999431 CACTGAAATGTACCTTTGTGTATTACT 58.001 33.333 0.46 0.00 0.00 2.24
4043 6386 8.999431 ACTGAAATGTACCTTTGTGTATTACTG 58.001 33.333 0.46 0.00 0.00 2.74
4044 6387 8.911918 TGAAATGTACCTTTGTGTATTACTGT 57.088 30.769 0.46 0.00 0.00 3.55
4045 6388 9.999660 TGAAATGTACCTTTGTGTATTACTGTA 57.000 29.630 0.46 0.00 0.00 2.74
4047 6390 8.488651 AATGTACCTTTGTGTATTACTGTAGC 57.511 34.615 0.00 0.00 0.00 3.58
4048 6391 7.235935 TGTACCTTTGTGTATTACTGTAGCT 57.764 36.000 0.00 0.00 0.00 3.32
4049 6392 7.673180 TGTACCTTTGTGTATTACTGTAGCTT 58.327 34.615 0.00 0.00 0.00 3.74
4050 6393 8.152246 TGTACCTTTGTGTATTACTGTAGCTTT 58.848 33.333 0.00 0.00 0.00 3.51
4051 6394 8.996271 GTACCTTTGTGTATTACTGTAGCTTTT 58.004 33.333 0.00 0.00 0.00 2.27
4053 6396 9.734984 ACCTTTGTGTATTACTGTAGCTTTTAT 57.265 29.630 0.00 0.00 0.00 1.40
4066 6409 8.734386 ACTGTAGCTTTTATCTTTCAGAAATGG 58.266 33.333 0.00 0.00 0.00 3.16
4067 6410 8.862325 TGTAGCTTTTATCTTTCAGAAATGGA 57.138 30.769 0.00 0.00 0.00 3.41
4068 6411 8.950210 TGTAGCTTTTATCTTTCAGAAATGGAG 58.050 33.333 0.00 0.00 0.00 3.86
4069 6412 9.167311 GTAGCTTTTATCTTTCAGAAATGGAGA 57.833 33.333 0.00 0.00 0.00 3.71
4070 6413 8.641498 AGCTTTTATCTTTCAGAAATGGAGAA 57.359 30.769 0.00 0.00 0.00 2.87
4071 6414 9.252635 AGCTTTTATCTTTCAGAAATGGAGAAT 57.747 29.630 0.00 0.00 0.00 2.40
4072 6415 9.298774 GCTTTTATCTTTCAGAAATGGAGAATG 57.701 33.333 0.00 0.00 0.00 2.67
4075 6418 9.519191 TTTATCTTTCAGAAATGGAGAATGTGA 57.481 29.630 0.00 0.00 0.00 3.58
4076 6419 6.808008 TCTTTCAGAAATGGAGAATGTGAC 57.192 37.500 0.00 0.00 0.00 3.67
4077 6420 5.409520 TCTTTCAGAAATGGAGAATGTGACG 59.590 40.000 0.00 0.00 0.00 4.35
4078 6421 4.271696 TCAGAAATGGAGAATGTGACGT 57.728 40.909 0.00 0.00 0.00 4.34
4079 6422 4.245660 TCAGAAATGGAGAATGTGACGTC 58.754 43.478 9.11 9.11 0.00 4.34
4080 6423 3.996363 CAGAAATGGAGAATGTGACGTCA 59.004 43.478 15.76 15.76 0.00 4.35
4081 6424 4.092529 CAGAAATGGAGAATGTGACGTCAG 59.907 45.833 20.73 0.00 0.00 3.51
4082 6425 2.015736 ATGGAGAATGTGACGTCAGC 57.984 50.000 20.73 14.28 0.00 4.26
4083 6426 0.037326 TGGAGAATGTGACGTCAGCC 60.037 55.000 20.73 9.02 0.00 4.85
4084 6427 0.247736 GGAGAATGTGACGTCAGCCT 59.752 55.000 20.73 13.11 0.00 4.58
4085 6428 1.338200 GGAGAATGTGACGTCAGCCTT 60.338 52.381 20.73 12.49 0.00 4.35
4086 6429 1.728971 GAGAATGTGACGTCAGCCTTG 59.271 52.381 20.73 0.00 0.00 3.61
4087 6430 1.344438 AGAATGTGACGTCAGCCTTGA 59.656 47.619 20.73 0.00 0.00 3.02
4088 6431 1.728971 GAATGTGACGTCAGCCTTGAG 59.271 52.381 20.73 0.00 32.98 3.02
4089 6432 0.969149 ATGTGACGTCAGCCTTGAGA 59.031 50.000 20.73 0.00 32.98 3.27
4097 6440 3.181465 ACGTCAGCCTTGAGAGAAAGAAA 60.181 43.478 0.00 0.00 32.98 2.52
4207 6551 1.201429 AGTCAAATCACCCCCTCGCT 61.201 55.000 0.00 0.00 0.00 4.93
4230 6575 6.544928 TCTGATTATAGTGGTTTCTGCAGA 57.455 37.500 13.74 13.74 0.00 4.26
4243 6588 2.309613 TCTGCAGATGGTTTTGCTTGT 58.690 42.857 13.74 0.00 40.87 3.16
4295 6641 2.262637 TGGGGTGGGTCTAGTTAACTG 58.737 52.381 18.56 8.35 0.00 3.16
4296 6642 1.065636 GGGGTGGGTCTAGTTAACTGC 60.066 57.143 18.56 8.05 0.00 4.40
4297 6643 1.907255 GGGTGGGTCTAGTTAACTGCT 59.093 52.381 18.56 0.00 0.00 4.24
4298 6644 2.093606 GGGTGGGTCTAGTTAACTGCTC 60.094 54.545 18.56 8.69 0.00 4.26
4299 6645 2.093606 GGTGGGTCTAGTTAACTGCTCC 60.094 54.545 18.56 15.21 0.00 4.70
4300 6646 2.832733 GTGGGTCTAGTTAACTGCTCCT 59.167 50.000 18.56 0.00 0.00 3.69
4301 6647 2.832129 TGGGTCTAGTTAACTGCTCCTG 59.168 50.000 18.56 2.04 0.00 3.86
4302 6648 2.832733 GGGTCTAGTTAACTGCTCCTGT 59.167 50.000 18.56 0.00 0.00 4.00
4303 6649 3.261137 GGGTCTAGTTAACTGCTCCTGTT 59.739 47.826 18.56 0.00 0.00 3.16
4304 6650 4.262938 GGGTCTAGTTAACTGCTCCTGTTT 60.263 45.833 18.56 0.00 0.00 2.83
4305 6651 5.306394 GGTCTAGTTAACTGCTCCTGTTTT 58.694 41.667 18.56 0.00 0.00 2.43
4306 6652 5.179555 GGTCTAGTTAACTGCTCCTGTTTTG 59.820 44.000 18.56 0.00 0.00 2.44
4473 6820 4.124238 TGCTATATTTTCTGGTACACGGC 58.876 43.478 0.00 0.00 0.00 5.68
4533 6886 7.066163 CACTGAGAATACTGCCAATTCACATAA 59.934 37.037 0.00 0.00 34.74 1.90
4633 6986 7.701539 TCAGCAATAGTTCCACATTACATTT 57.298 32.000 0.00 0.00 0.00 2.32
4668 7021 1.679139 CCTGTGTTGTTCAGGCTTCA 58.321 50.000 0.00 0.00 44.46 3.02
4669 7022 1.605710 CCTGTGTTGTTCAGGCTTCAG 59.394 52.381 0.00 0.00 44.46 3.02
4670 7023 1.605710 CTGTGTTGTTCAGGCTTCAGG 59.394 52.381 0.00 0.00 0.00 3.86
4671 7024 0.312102 GTGTTGTTCAGGCTTCAGGC 59.688 55.000 0.00 0.00 41.43 4.85
4680 7033 3.086733 GGCTTCAGGCTACATGGAC 57.913 57.895 0.00 0.00 41.46 4.02
4681 7034 0.811616 GGCTTCAGGCTACATGGACG 60.812 60.000 0.00 0.00 41.46 4.79
4682 7035 0.175760 GCTTCAGGCTACATGGACGA 59.824 55.000 0.00 0.00 38.06 4.20
4683 7036 1.927895 CTTCAGGCTACATGGACGAC 58.072 55.000 0.00 0.00 0.00 4.34
4684 7037 1.204704 CTTCAGGCTACATGGACGACA 59.795 52.381 0.00 0.00 0.00 4.35
4685 7038 1.485124 TCAGGCTACATGGACGACAT 58.515 50.000 0.00 0.00 41.57 3.06
4692 7045 2.998097 ATGGACGACATGGTGGGG 59.002 61.111 0.00 0.00 38.70 4.96
4693 7046 3.344137 ATGGACGACATGGTGGGGC 62.344 63.158 0.00 0.00 38.70 5.80
4694 7047 4.028490 GGACGACATGGTGGGGCA 62.028 66.667 0.00 0.00 0.00 5.36
4695 7048 2.033448 GACGACATGGTGGGGCAA 59.967 61.111 0.00 0.00 0.00 4.52
4696 7049 1.602323 GACGACATGGTGGGGCAAA 60.602 57.895 0.00 0.00 0.00 3.68
4697 7050 1.152652 ACGACATGGTGGGGCAAAA 60.153 52.632 0.00 0.00 0.00 2.44
4698 7051 0.757188 ACGACATGGTGGGGCAAAAA 60.757 50.000 0.00 0.00 0.00 1.94
4699 7052 0.607620 CGACATGGTGGGGCAAAAAT 59.392 50.000 0.00 0.00 0.00 1.82
4700 7053 1.404047 CGACATGGTGGGGCAAAAATC 60.404 52.381 0.00 0.00 0.00 2.17
4701 7054 1.901833 GACATGGTGGGGCAAAAATCT 59.098 47.619 0.00 0.00 0.00 2.40
4702 7055 1.624813 ACATGGTGGGGCAAAAATCTG 59.375 47.619 0.00 0.00 0.00 2.90
4703 7056 1.624813 CATGGTGGGGCAAAAATCTGT 59.375 47.619 0.00 0.00 0.00 3.41
4704 7057 1.799933 TGGTGGGGCAAAAATCTGTT 58.200 45.000 0.00 0.00 0.00 3.16
4705 7058 2.122768 TGGTGGGGCAAAAATCTGTTT 58.877 42.857 0.00 0.00 0.00 2.83
4706 7059 2.103941 TGGTGGGGCAAAAATCTGTTTC 59.896 45.455 0.00 0.00 0.00 2.78
4707 7060 2.103941 GGTGGGGCAAAAATCTGTTTCA 59.896 45.455 0.00 0.00 0.00 2.69
4708 7061 3.432890 GGTGGGGCAAAAATCTGTTTCAA 60.433 43.478 0.00 0.00 0.00 2.69
4709 7062 3.809279 GTGGGGCAAAAATCTGTTTCAAG 59.191 43.478 0.00 0.00 0.00 3.02
4710 7063 3.708631 TGGGGCAAAAATCTGTTTCAAGA 59.291 39.130 0.00 0.00 0.00 3.02
4711 7064 4.202243 TGGGGCAAAAATCTGTTTCAAGAG 60.202 41.667 0.00 0.00 0.00 2.85
4712 7065 4.039124 GGGGCAAAAATCTGTTTCAAGAGA 59.961 41.667 0.00 0.00 32.47 3.10
4713 7066 5.279657 GGGGCAAAAATCTGTTTCAAGAGAT 60.280 40.000 0.00 0.00 40.37 2.75
4715 7068 6.146673 GGGCAAAAATCTGTTTCAAGAGATTG 59.853 38.462 11.56 4.14 45.09 2.67
4716 7069 6.703165 GGCAAAAATCTGTTTCAAGAGATTGT 59.297 34.615 11.56 4.82 45.09 2.71
4717 7070 7.306983 GGCAAAAATCTGTTTCAAGAGATTGTG 60.307 37.037 11.56 12.83 45.09 3.33
4718 7071 7.561556 CAAAAATCTGTTTCAAGAGATTGTGC 58.438 34.615 11.56 0.00 45.09 4.57
4719 7072 6.645790 AAATCTGTTTCAAGAGATTGTGCT 57.354 33.333 11.56 0.00 45.09 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.565305 CAGTATGAGAAGCGCCAGAC 58.435 55.000 2.29 1.82 39.69 3.51
1 2 0.461548 CCAGTATGAGAAGCGCCAGA 59.538 55.000 2.29 0.00 39.69 3.86
2 3 1.156645 GCCAGTATGAGAAGCGCCAG 61.157 60.000 2.29 0.00 39.69 4.85
3 4 1.153369 GCCAGTATGAGAAGCGCCA 60.153 57.895 2.29 0.00 39.69 5.69
4 5 1.889573 GGCCAGTATGAGAAGCGCC 60.890 63.158 2.29 0.00 39.69 6.53
5 6 0.878086 GAGGCCAGTATGAGAAGCGC 60.878 60.000 5.01 0.00 39.69 5.92
7 8 0.461961 ACGAGGCCAGTATGAGAAGC 59.538 55.000 5.01 0.00 39.69 3.86
9 10 4.462834 CCATATACGAGGCCAGTATGAGAA 59.537 45.833 25.19 11.95 39.69 2.87
10 11 4.017126 CCATATACGAGGCCAGTATGAGA 58.983 47.826 25.19 12.22 39.69 3.27
11 12 3.131223 CCCATATACGAGGCCAGTATGAG 59.869 52.174 25.19 18.70 39.69 2.90
12 13 3.096852 CCCATATACGAGGCCAGTATGA 58.903 50.000 25.19 14.27 39.69 2.15
13 14 3.096852 TCCCATATACGAGGCCAGTATG 58.903 50.000 25.19 16.26 36.36 2.39
15 16 2.984435 TCCCATATACGAGGCCAGTA 57.016 50.000 5.01 9.77 0.00 2.74
17 18 2.167281 CTCATCCCATATACGAGGCCAG 59.833 54.545 5.01 0.00 0.00 4.85
18 19 2.179427 CTCATCCCATATACGAGGCCA 58.821 52.381 5.01 0.00 0.00 5.36
19 20 2.166664 GACTCATCCCATATACGAGGCC 59.833 54.545 0.00 0.00 0.00 5.19
20 21 3.093057 AGACTCATCCCATATACGAGGC 58.907 50.000 0.00 0.00 31.52 4.70
21 22 4.336280 TCAGACTCATCCCATATACGAGG 58.664 47.826 0.00 0.00 0.00 4.63
22 23 5.707764 TCTTCAGACTCATCCCATATACGAG 59.292 44.000 0.00 0.00 0.00 4.18
23 24 5.631119 TCTTCAGACTCATCCCATATACGA 58.369 41.667 0.00 0.00 0.00 3.43
24 25 5.475220 ACTCTTCAGACTCATCCCATATACG 59.525 44.000 0.00 0.00 0.00 3.06
25 26 6.266558 ACACTCTTCAGACTCATCCCATATAC 59.733 42.308 0.00 0.00 0.00 1.47
26 27 6.377080 ACACTCTTCAGACTCATCCCATATA 58.623 40.000 0.00 0.00 0.00 0.86
27 28 5.215069 ACACTCTTCAGACTCATCCCATAT 58.785 41.667 0.00 0.00 0.00 1.78
28 29 4.614475 ACACTCTTCAGACTCATCCCATA 58.386 43.478 0.00 0.00 0.00 2.74
29 30 3.448934 ACACTCTTCAGACTCATCCCAT 58.551 45.455 0.00 0.00 0.00 4.00
30 31 2.828520 GACACTCTTCAGACTCATCCCA 59.171 50.000 0.00 0.00 0.00 4.37
31 32 2.828520 TGACACTCTTCAGACTCATCCC 59.171 50.000 0.00 0.00 0.00 3.85
32 33 3.671971 CGTGACACTCTTCAGACTCATCC 60.672 52.174 3.68 0.00 0.00 3.51
33 34 3.057876 ACGTGACACTCTTCAGACTCATC 60.058 47.826 3.68 0.00 0.00 2.92
34 35 2.887783 ACGTGACACTCTTCAGACTCAT 59.112 45.455 3.68 0.00 0.00 2.90
35 36 2.290916 GACGTGACACTCTTCAGACTCA 59.709 50.000 3.68 0.00 0.00 3.41
36 37 2.290916 TGACGTGACACTCTTCAGACTC 59.709 50.000 3.68 0.00 0.00 3.36
37 38 2.298610 TGACGTGACACTCTTCAGACT 58.701 47.619 3.68 0.00 0.00 3.24
38 39 2.776312 TGACGTGACACTCTTCAGAC 57.224 50.000 3.68 0.00 0.00 3.51
39 40 3.552890 CCATTGACGTGACACTCTTCAGA 60.553 47.826 3.68 0.00 0.00 3.27
40 41 2.733552 CCATTGACGTGACACTCTTCAG 59.266 50.000 3.68 0.00 0.00 3.02
41 42 2.102420 ACCATTGACGTGACACTCTTCA 59.898 45.455 3.68 0.95 0.00 3.02
42 43 2.731976 GACCATTGACGTGACACTCTTC 59.268 50.000 3.68 0.00 0.00 2.87
43 44 2.548067 GGACCATTGACGTGACACTCTT 60.548 50.000 3.68 0.00 0.00 2.85
44 45 1.000955 GGACCATTGACGTGACACTCT 59.999 52.381 3.68 0.00 0.00 3.24
45 46 1.000955 AGGACCATTGACGTGACACTC 59.999 52.381 3.68 1.43 0.00 3.51
46 47 1.048601 AGGACCATTGACGTGACACT 58.951 50.000 3.68 0.00 0.00 3.55
47 48 1.148310 CAGGACCATTGACGTGACAC 58.852 55.000 0.00 0.00 0.00 3.67
48 49 0.602638 GCAGGACCATTGACGTGACA 60.603 55.000 0.00 0.00 0.00 3.58
49 50 1.626654 CGCAGGACCATTGACGTGAC 61.627 60.000 0.00 0.00 0.00 3.67
50 51 1.374125 CGCAGGACCATTGACGTGA 60.374 57.895 0.00 0.00 0.00 4.35
51 52 3.027170 GCGCAGGACCATTGACGTG 62.027 63.158 0.30 0.00 0.00 4.49
52 53 2.742372 GCGCAGGACCATTGACGT 60.742 61.111 0.30 0.00 0.00 4.34
53 54 3.499737 GGCGCAGGACCATTGACG 61.500 66.667 10.83 0.00 0.00 4.35
54 55 3.134127 GGGCGCAGGACCATTGAC 61.134 66.667 10.83 0.00 42.95 3.18
55 56 4.776322 CGGGCGCAGGACCATTGA 62.776 66.667 10.83 0.00 44.06 2.57
68 69 3.276846 AAATCATACGCGGCGGGC 61.277 61.111 27.37 0.00 38.69 6.13
69 70 1.885388 TCAAATCATACGCGGCGGG 60.885 57.895 27.37 23.00 0.00 6.13
70 71 1.275657 GTCAAATCATACGCGGCGG 59.724 57.895 27.37 9.14 0.00 6.13
71 72 1.275657 GGTCAAATCATACGCGGCG 59.724 57.895 22.36 22.36 0.00 6.46
72 73 1.092921 TGGGTCAAATCATACGCGGC 61.093 55.000 12.47 0.00 0.00 6.53
73 74 0.655733 GTGGGTCAAATCATACGCGG 59.344 55.000 12.47 0.00 0.00 6.46
74 75 0.655733 GGTGGGTCAAATCATACGCG 59.344 55.000 3.53 3.53 0.00 6.01
75 76 1.400494 GTGGTGGGTCAAATCATACGC 59.600 52.381 0.00 0.00 0.00 4.42
76 77 1.663643 CGTGGTGGGTCAAATCATACG 59.336 52.381 0.00 0.00 0.00 3.06
77 78 2.014128 CCGTGGTGGGTCAAATCATAC 58.986 52.381 0.00 0.00 0.00 2.39
78 79 1.909986 TCCGTGGTGGGTCAAATCATA 59.090 47.619 0.00 0.00 38.76 2.15
79 80 0.695924 TCCGTGGTGGGTCAAATCAT 59.304 50.000 0.00 0.00 38.76 2.45
80 81 0.036164 CTCCGTGGTGGGTCAAATCA 59.964 55.000 0.00 0.00 38.76 2.57
81 82 1.305930 GCTCCGTGGTGGGTCAAATC 61.306 60.000 0.00 0.00 38.76 2.17
82 83 1.303317 GCTCCGTGGTGGGTCAAAT 60.303 57.895 0.00 0.00 38.76 2.32
83 84 2.063015 ATGCTCCGTGGTGGGTCAAA 62.063 55.000 0.00 0.00 38.76 2.69
84 85 2.463589 GATGCTCCGTGGTGGGTCAA 62.464 60.000 0.00 0.00 38.76 3.18
85 86 2.927856 ATGCTCCGTGGTGGGTCA 60.928 61.111 0.00 0.00 38.76 4.02
86 87 2.125106 GATGCTCCGTGGTGGGTC 60.125 66.667 0.00 0.00 38.76 4.46
87 88 3.717294 GGATGCTCCGTGGTGGGT 61.717 66.667 0.00 0.00 38.76 4.51
88 89 2.484287 AAAGGATGCTCCGTGGTGGG 62.484 60.000 0.00 0.00 42.75 4.61
89 90 0.609131 AAAAGGATGCTCCGTGGTGG 60.609 55.000 0.00 0.00 42.75 4.61
90 91 1.200020 GAAAAAGGATGCTCCGTGGTG 59.800 52.381 0.00 0.00 42.75 4.17
91 92 1.534729 GAAAAAGGATGCTCCGTGGT 58.465 50.000 0.00 0.00 42.75 4.16
92 93 0.811281 GGAAAAAGGATGCTCCGTGG 59.189 55.000 0.00 0.00 42.75 4.94
93 94 1.826385 AGGAAAAAGGATGCTCCGTG 58.174 50.000 0.00 0.00 42.75 4.94
94 95 2.586648 AAGGAAAAAGGATGCTCCGT 57.413 45.000 0.00 0.00 42.75 4.69
95 96 3.084786 AGAAAGGAAAAAGGATGCTCCG 58.915 45.455 0.00 0.00 42.75 4.63
96 97 5.474578 AAAGAAAGGAAAAAGGATGCTCC 57.525 39.130 0.00 0.00 36.58 4.70
120 121 9.868160 AGAAAGAGAGGGAAAGAAAAGAAATAA 57.132 29.630 0.00 0.00 0.00 1.40
121 122 9.868160 AAGAAAGAGAGGGAAAGAAAAGAAATA 57.132 29.630 0.00 0.00 0.00 1.40
122 123 8.774546 AAGAAAGAGAGGGAAAGAAAAGAAAT 57.225 30.769 0.00 0.00 0.00 2.17
123 124 7.834181 TGAAGAAAGAGAGGGAAAGAAAAGAAA 59.166 33.333 0.00 0.00 0.00 2.52
124 125 7.283354 GTGAAGAAAGAGAGGGAAAGAAAAGAA 59.717 37.037 0.00 0.00 0.00 2.52
125 126 6.768381 GTGAAGAAAGAGAGGGAAAGAAAAGA 59.232 38.462 0.00 0.00 0.00 2.52
126 127 6.016693 GGTGAAGAAAGAGAGGGAAAGAAAAG 60.017 42.308 0.00 0.00 0.00 2.27
127 128 5.828328 GGTGAAGAAAGAGAGGGAAAGAAAA 59.172 40.000 0.00 0.00 0.00 2.29
128 129 5.104109 TGGTGAAGAAAGAGAGGGAAAGAAA 60.104 40.000 0.00 0.00 0.00 2.52
129 130 4.412199 TGGTGAAGAAAGAGAGGGAAAGAA 59.588 41.667 0.00 0.00 0.00 2.52
130 131 3.973973 TGGTGAAGAAAGAGAGGGAAAGA 59.026 43.478 0.00 0.00 0.00 2.52
131 132 4.357918 TGGTGAAGAAAGAGAGGGAAAG 57.642 45.455 0.00 0.00 0.00 2.62
132 133 4.788925 TTGGTGAAGAAAGAGAGGGAAA 57.211 40.909 0.00 0.00 0.00 3.13
133 134 4.350816 TGATTGGTGAAGAAAGAGAGGGAA 59.649 41.667 0.00 0.00 0.00 3.97
134 135 3.909995 TGATTGGTGAAGAAAGAGAGGGA 59.090 43.478 0.00 0.00 0.00 4.20
135 136 4.292186 TGATTGGTGAAGAAAGAGAGGG 57.708 45.455 0.00 0.00 0.00 4.30
136 137 6.017275 GCATATGATTGGTGAAGAAAGAGAGG 60.017 42.308 6.97 0.00 0.00 3.69
137 138 6.541278 TGCATATGATTGGTGAAGAAAGAGAG 59.459 38.462 6.97 0.00 0.00 3.20
138 139 6.417258 TGCATATGATTGGTGAAGAAAGAGA 58.583 36.000 6.97 0.00 0.00 3.10
139 140 6.688637 TGCATATGATTGGTGAAGAAAGAG 57.311 37.500 6.97 0.00 0.00 2.85
140 141 6.604396 ACATGCATATGATTGGTGAAGAAAGA 59.396 34.615 6.97 0.00 37.73 2.52
141 142 6.695713 CACATGCATATGATTGGTGAAGAAAG 59.304 38.462 6.97 0.00 37.73 2.62
142 143 6.377712 TCACATGCATATGATTGGTGAAGAAA 59.622 34.615 2.84 0.00 37.73 2.52
143 144 5.887035 TCACATGCATATGATTGGTGAAGAA 59.113 36.000 2.84 0.00 37.73 2.52
144 145 5.438833 TCACATGCATATGATTGGTGAAGA 58.561 37.500 2.84 0.00 37.73 2.87
145 146 5.758924 CTCACATGCATATGATTGGTGAAG 58.241 41.667 8.37 2.95 37.73 3.02
146 147 4.037089 GCTCACATGCATATGATTGGTGAA 59.963 41.667 8.37 0.00 37.73 3.18
147 148 3.566742 GCTCACATGCATATGATTGGTGA 59.433 43.478 8.37 10.46 37.73 4.02
148 149 3.608474 CGCTCACATGCATATGATTGGTG 60.608 47.826 8.37 6.43 37.73 4.17
149 150 2.551032 CGCTCACATGCATATGATTGGT 59.449 45.455 8.37 0.00 37.73 3.67
150 151 2.551032 ACGCTCACATGCATATGATTGG 59.449 45.455 8.37 3.51 37.73 3.16
151 152 3.891056 ACGCTCACATGCATATGATTG 57.109 42.857 8.37 6.58 37.73 2.67
152 153 3.748048 GGTACGCTCACATGCATATGATT 59.252 43.478 8.37 0.00 37.73 2.57
153 154 3.007290 AGGTACGCTCACATGCATATGAT 59.993 43.478 8.37 0.00 37.73 2.45
154 155 2.365293 AGGTACGCTCACATGCATATGA 59.635 45.455 7.57 7.57 37.73 2.15
155 156 2.759191 AGGTACGCTCACATGCATATG 58.241 47.619 0.00 0.00 40.24 1.78
156 157 4.808414 ATAGGTACGCTCACATGCATAT 57.192 40.909 0.00 0.00 0.00 1.78
157 158 5.715434 TTATAGGTACGCTCACATGCATA 57.285 39.130 0.00 0.00 0.00 3.14
158 159 4.600692 TTATAGGTACGCTCACATGCAT 57.399 40.909 0.00 0.00 0.00 3.96
159 160 4.098807 TCTTTATAGGTACGCTCACATGCA 59.901 41.667 0.00 0.00 0.00 3.96
160 161 4.617959 TCTTTATAGGTACGCTCACATGC 58.382 43.478 0.00 0.00 0.00 4.06
161 162 7.534085 TTTTCTTTATAGGTACGCTCACATG 57.466 36.000 0.00 0.00 0.00 3.21
183 184 8.196771 TGTCTGCACTCATATTTTTCACTTTTT 58.803 29.630 0.00 0.00 0.00 1.94
184 185 7.715657 TGTCTGCACTCATATTTTTCACTTTT 58.284 30.769 0.00 0.00 0.00 2.27
185 186 7.275888 TGTCTGCACTCATATTTTTCACTTT 57.724 32.000 0.00 0.00 0.00 2.66
186 187 6.882610 TGTCTGCACTCATATTTTTCACTT 57.117 33.333 0.00 0.00 0.00 3.16
187 188 6.882610 TTGTCTGCACTCATATTTTTCACT 57.117 33.333 0.00 0.00 0.00 3.41
188 189 9.282247 CTATTTGTCTGCACTCATATTTTTCAC 57.718 33.333 0.00 0.00 0.00 3.18
189 190 8.461222 CCTATTTGTCTGCACTCATATTTTTCA 58.539 33.333 0.00 0.00 0.00 2.69
190 191 8.677300 TCCTATTTGTCTGCACTCATATTTTTC 58.323 33.333 0.00 0.00 0.00 2.29
191 192 8.579850 TCCTATTTGTCTGCACTCATATTTTT 57.420 30.769 0.00 0.00 0.00 1.94
192 193 8.579850 TTCCTATTTGTCTGCACTCATATTTT 57.420 30.769 0.00 0.00 0.00 1.82
193 194 7.831193 ACTTCCTATTTGTCTGCACTCATATTT 59.169 33.333 0.00 0.00 0.00 1.40
194 195 7.341805 ACTTCCTATTTGTCTGCACTCATATT 58.658 34.615 0.00 0.00 0.00 1.28
195 196 6.893583 ACTTCCTATTTGTCTGCACTCATAT 58.106 36.000 0.00 0.00 0.00 1.78
196 197 6.070824 TGACTTCCTATTTGTCTGCACTCATA 60.071 38.462 0.00 0.00 0.00 2.15
197 198 5.171339 ACTTCCTATTTGTCTGCACTCAT 57.829 39.130 0.00 0.00 0.00 2.90
198 199 4.040339 TGACTTCCTATTTGTCTGCACTCA 59.960 41.667 0.00 0.00 0.00 3.41
199 200 4.569943 TGACTTCCTATTTGTCTGCACTC 58.430 43.478 0.00 0.00 0.00 3.51
200 201 4.623932 TGACTTCCTATTTGTCTGCACT 57.376 40.909 0.00 0.00 0.00 4.40
201 202 5.689383 TTTGACTTCCTATTTGTCTGCAC 57.311 39.130 0.00 0.00 0.00 4.57
202 203 5.592282 TGTTTTGACTTCCTATTTGTCTGCA 59.408 36.000 0.00 0.00 0.00 4.41
203 204 6.072112 TGTTTTGACTTCCTATTTGTCTGC 57.928 37.500 0.00 0.00 0.00 4.26
204 205 7.973388 TGTTTGTTTTGACTTCCTATTTGTCTG 59.027 33.333 0.00 0.00 0.00 3.51
205 206 7.973944 GTGTTTGTTTTGACTTCCTATTTGTCT 59.026 33.333 0.00 0.00 0.00 3.41
206 207 7.757624 TGTGTTTGTTTTGACTTCCTATTTGTC 59.242 33.333 0.00 0.00 0.00 3.18
207 208 7.607250 TGTGTTTGTTTTGACTTCCTATTTGT 58.393 30.769 0.00 0.00 0.00 2.83
208 209 8.647143 ATGTGTTTGTTTTGACTTCCTATTTG 57.353 30.769 0.00 0.00 0.00 2.32
209 210 7.926018 GGATGTGTTTGTTTTGACTTCCTATTT 59.074 33.333 0.00 0.00 32.49 1.40
210 211 7.433680 GGATGTGTTTGTTTTGACTTCCTATT 58.566 34.615 0.00 0.00 32.49 1.73
211 212 6.293955 CGGATGTGTTTGTTTTGACTTCCTAT 60.294 38.462 0.00 0.00 32.86 2.57
212 213 5.008217 CGGATGTGTTTGTTTTGACTTCCTA 59.992 40.000 0.00 0.00 32.86 2.94
213 214 4.202010 CGGATGTGTTTGTTTTGACTTCCT 60.202 41.667 0.00 0.00 32.86 3.36
214 215 4.041723 CGGATGTGTTTGTTTTGACTTCC 58.958 43.478 0.00 0.00 32.09 3.46
215 216 4.041723 CCGGATGTGTTTGTTTTGACTTC 58.958 43.478 0.00 0.00 0.00 3.01
216 217 3.697045 TCCGGATGTGTTTGTTTTGACTT 59.303 39.130 0.00 0.00 0.00 3.01
217 218 3.283751 TCCGGATGTGTTTGTTTTGACT 58.716 40.909 0.00 0.00 0.00 3.41
218 219 3.701532 TCCGGATGTGTTTGTTTTGAC 57.298 42.857 0.00 0.00 0.00 3.18
219 220 5.067273 AGTATCCGGATGTGTTTGTTTTGA 58.933 37.500 27.55 0.00 0.00 2.69
220 221 5.371115 AGTATCCGGATGTGTTTGTTTTG 57.629 39.130 27.55 0.00 0.00 2.44
221 222 6.713450 AGTTAGTATCCGGATGTGTTTGTTTT 59.287 34.615 27.55 0.00 0.00 2.43
222 223 6.235664 AGTTAGTATCCGGATGTGTTTGTTT 58.764 36.000 27.55 0.00 0.00 2.83
223 224 5.801380 AGTTAGTATCCGGATGTGTTTGTT 58.199 37.500 27.55 0.00 0.00 2.83
224 225 5.416271 AGTTAGTATCCGGATGTGTTTGT 57.584 39.130 27.55 0.42 0.00 2.83
225 226 5.983720 CCTAGTTAGTATCCGGATGTGTTTG 59.016 44.000 27.55 9.68 0.00 2.93
226 227 5.452917 GCCTAGTTAGTATCCGGATGTGTTT 60.453 44.000 27.55 10.34 0.00 2.83
227 228 4.038883 GCCTAGTTAGTATCCGGATGTGTT 59.961 45.833 27.55 11.54 0.00 3.32
228 229 3.573110 GCCTAGTTAGTATCCGGATGTGT 59.427 47.826 27.55 13.18 0.00 3.72
229 230 3.366070 CGCCTAGTTAGTATCCGGATGTG 60.366 52.174 27.55 9.37 0.00 3.21
230 231 2.818432 CGCCTAGTTAGTATCCGGATGT 59.182 50.000 27.55 16.10 0.00 3.06
231 232 2.415625 GCGCCTAGTTAGTATCCGGATG 60.416 54.545 27.55 7.73 0.00 3.51
232 233 1.817447 GCGCCTAGTTAGTATCCGGAT 59.183 52.381 22.95 22.95 0.00 4.18
233 234 1.242076 GCGCCTAGTTAGTATCCGGA 58.758 55.000 6.61 6.61 0.00 5.14
234 235 0.109873 CGCGCCTAGTTAGTATCCGG 60.110 60.000 0.00 0.00 0.00 5.14
235 236 0.590195 ACGCGCCTAGTTAGTATCCG 59.410 55.000 5.73 0.00 0.00 4.18
236 237 1.068679 GGACGCGCCTAGTTAGTATCC 60.069 57.143 5.73 0.00 0.00 2.59
237 238 1.605710 TGGACGCGCCTAGTTAGTATC 59.394 52.381 18.14 0.00 37.63 2.24
238 239 1.336125 GTGGACGCGCCTAGTTAGTAT 59.664 52.381 18.14 0.00 37.63 2.12
239 240 0.734889 GTGGACGCGCCTAGTTAGTA 59.265 55.000 18.14 0.00 37.63 1.82
240 241 1.246056 TGTGGACGCGCCTAGTTAGT 61.246 55.000 18.14 0.00 37.63 2.24
241 242 0.102481 ATGTGGACGCGCCTAGTTAG 59.898 55.000 18.14 0.00 37.63 2.34
242 243 1.391577 TATGTGGACGCGCCTAGTTA 58.608 50.000 18.14 5.12 37.63 2.24
243 244 0.750850 ATATGTGGACGCGCCTAGTT 59.249 50.000 18.14 5.89 37.63 2.24
244 245 0.032130 CATATGTGGACGCGCCTAGT 59.968 55.000 18.14 0.00 37.63 2.57
245 246 0.032130 ACATATGTGGACGCGCCTAG 59.968 55.000 18.14 0.00 37.63 3.02
246 247 0.462375 AACATATGTGGACGCGCCTA 59.538 50.000 9.63 0.00 37.63 3.93
247 248 0.392461 AAACATATGTGGACGCGCCT 60.392 50.000 9.63 0.00 37.63 5.52
248 249 0.248054 CAAACATATGTGGACGCGCC 60.248 55.000 9.63 9.63 37.10 6.53
249 250 0.724549 TCAAACATATGTGGACGCGC 59.275 50.000 9.63 0.00 0.00 6.86
250 251 1.327460 CCTCAAACATATGTGGACGCG 59.673 52.381 9.63 3.53 36.32 6.01
251 252 1.670811 CCCTCAAACATATGTGGACGC 59.329 52.381 9.63 0.00 36.32 5.19
252 253 1.670811 GCCCTCAAACATATGTGGACG 59.329 52.381 9.63 4.75 36.32 4.79
253 254 2.024414 GGCCCTCAAACATATGTGGAC 58.976 52.381 9.63 4.03 36.32 4.02
254 255 1.408127 CGGCCCTCAAACATATGTGGA 60.408 52.381 9.63 9.49 36.32 4.02
255 256 1.024271 CGGCCCTCAAACATATGTGG 58.976 55.000 9.63 6.96 34.48 4.17
256 257 0.381801 GCGGCCCTCAAACATATGTG 59.618 55.000 9.63 0.00 0.00 3.21
257 258 0.751643 GGCGGCCCTCAAACATATGT 60.752 55.000 8.12 1.41 0.00 2.29
258 259 1.455383 GGGCGGCCCTCAAACATATG 61.455 60.000 30.86 0.00 41.34 1.78
259 260 1.152756 GGGCGGCCCTCAAACATAT 60.153 57.895 30.86 0.00 41.34 1.78
260 261 2.143575 TTGGGCGGCCCTCAAACATA 62.144 55.000 36.21 13.04 45.70 2.29
261 262 2.803593 ATTGGGCGGCCCTCAAACAT 62.804 55.000 36.21 16.48 45.70 2.71
262 263 3.521765 ATTGGGCGGCCCTCAAACA 62.522 57.895 36.21 14.63 45.70 2.83
263 264 2.679996 ATTGGGCGGCCCTCAAAC 60.680 61.111 36.21 11.61 45.70 2.93
264 265 2.362375 GATTGGGCGGCCCTCAAA 60.362 61.111 36.21 23.82 45.70 2.69
265 266 4.794648 CGATTGGGCGGCCCTCAA 62.795 66.667 36.21 24.55 45.70 3.02
287 288 0.393808 TCTTTTGGGGCATCTACGGC 60.394 55.000 0.00 0.00 0.00 5.68
288 289 2.122783 TTCTTTTGGGGCATCTACGG 57.877 50.000 0.00 0.00 0.00 4.02
289 290 5.588648 TCTTATTTCTTTTGGGGCATCTACG 59.411 40.000 0.00 0.00 0.00 3.51
290 291 7.258441 GTTCTTATTTCTTTTGGGGCATCTAC 58.742 38.462 0.00 0.00 0.00 2.59
291 292 6.379988 GGTTCTTATTTCTTTTGGGGCATCTA 59.620 38.462 0.00 0.00 0.00 1.98
292 293 5.187772 GGTTCTTATTTCTTTTGGGGCATCT 59.812 40.000 0.00 0.00 0.00 2.90
293 294 5.187772 AGGTTCTTATTTCTTTTGGGGCATC 59.812 40.000 0.00 0.00 0.00 3.91
294 295 5.093677 AGGTTCTTATTTCTTTTGGGGCAT 58.906 37.500 0.00 0.00 0.00 4.40
295 296 4.488770 AGGTTCTTATTTCTTTTGGGGCA 58.511 39.130 0.00 0.00 0.00 5.36
296 297 6.014925 TGTTAGGTTCTTATTTCTTTTGGGGC 60.015 38.462 0.00 0.00 0.00 5.80
297 298 7.232737 ACTGTTAGGTTCTTATTTCTTTTGGGG 59.767 37.037 0.00 0.00 0.00 4.96
298 299 8.178313 ACTGTTAGGTTCTTATTTCTTTTGGG 57.822 34.615 0.00 0.00 0.00 4.12
319 320 8.749354 ACTCCTTTCATTTTTCAGTTTTACTGT 58.251 29.630 6.71 0.00 46.03 3.55
350 351 0.032615 AGGTAGCCAGGAGAGTGGAG 60.033 60.000 0.00 0.00 40.44 3.86
351 352 1.305886 TAGGTAGCCAGGAGAGTGGA 58.694 55.000 0.00 0.00 40.44 4.02
396 400 4.504916 CCTCGTCGGCAGCCAGAG 62.505 72.222 13.30 15.85 0.00 3.35
415 419 2.511829 TCTCTCTCTCGTCCGGCG 60.512 66.667 11.37 11.37 43.01 6.46
423 427 4.487714 TTCACTCCTCTCTCTCTCTCTC 57.512 50.000 0.00 0.00 0.00 3.20
424 428 4.141390 GGATTCACTCCTCTCTCTCTCTCT 60.141 50.000 0.00 0.00 41.29 3.10
425 429 4.137543 GGATTCACTCCTCTCTCTCTCTC 58.862 52.174 0.00 0.00 41.29 3.20
441 929 1.002624 GCCGTCACCCAAGGATTCA 60.003 57.895 0.00 0.00 0.00 2.57
445 933 0.251916 CATTAGCCGTCACCCAAGGA 59.748 55.000 0.00 0.00 0.00 3.36
462 950 0.462047 CGGTCGCCTTTTCCTAGCAT 60.462 55.000 0.00 0.00 0.00 3.79
541 1040 2.093447 GGTGGACCTAGTGATGTGGAAG 60.093 54.545 0.00 0.00 0.00 3.46
542 1041 1.906574 GGTGGACCTAGTGATGTGGAA 59.093 52.381 0.00 0.00 0.00 3.53
543 1042 1.078823 AGGTGGACCTAGTGATGTGGA 59.921 52.381 0.00 0.00 46.48 4.02
544 1043 1.208052 CAGGTGGACCTAGTGATGTGG 59.792 57.143 0.00 0.00 46.65 4.17
545 1044 1.208052 CCAGGTGGACCTAGTGATGTG 59.792 57.143 0.00 0.00 46.65 3.21
546 1045 1.573108 CCAGGTGGACCTAGTGATGT 58.427 55.000 0.00 0.00 46.65 3.06
547 1046 0.833287 CCCAGGTGGACCTAGTGATG 59.167 60.000 0.00 0.00 46.65 3.07
548 1047 0.983378 GCCCAGGTGGACCTAGTGAT 60.983 60.000 0.00 0.00 46.65 3.06
549 1048 1.612442 GCCCAGGTGGACCTAGTGA 60.612 63.158 0.00 0.00 46.65 3.41
591 1094 0.958822 TCTCTTGTGCGTGTCTGCTA 59.041 50.000 0.00 0.00 35.36 3.49
592 1095 0.598680 GTCTCTTGTGCGTGTCTGCT 60.599 55.000 0.00 0.00 35.36 4.24
593 1096 0.875908 TGTCTCTTGTGCGTGTCTGC 60.876 55.000 0.00 0.00 0.00 4.26
594 1097 1.135046 CTGTCTCTTGTGCGTGTCTG 58.865 55.000 0.00 0.00 0.00 3.51
648 1159 1.366082 TGGAGGAGGATGAAGGAAGGA 59.634 52.381 0.00 0.00 0.00 3.36
649 1160 1.488393 GTGGAGGAGGATGAAGGAAGG 59.512 57.143 0.00 0.00 0.00 3.46
650 1161 1.488393 GGTGGAGGAGGATGAAGGAAG 59.512 57.143 0.00 0.00 0.00 3.46
651 1162 1.203428 TGGTGGAGGAGGATGAAGGAA 60.203 52.381 0.00 0.00 0.00 3.36
890 1419 3.311106 GGTTGTATCGAAGACACGACAA 58.689 45.455 3.18 0.00 44.84 3.18
932 1461 4.460731 AGATCGATCGCAGAAATGGATAGA 59.539 41.667 19.33 0.00 43.58 1.98
946 1475 0.997226 CGCGTGGGTTAGATCGATCG 60.997 60.000 19.33 9.36 0.00 3.69
1473 2002 5.453198 GGAAGGAAGGAAGAGAATAGAGCTG 60.453 48.000 0.00 0.00 0.00 4.24
1491 2020 1.856920 ACAAAACAGGGGAAGGAAGGA 59.143 47.619 0.00 0.00 0.00 3.36
1492 2021 2.381752 ACAAAACAGGGGAAGGAAGG 57.618 50.000 0.00 0.00 0.00 3.46
1493 2022 2.812011 CGTACAAAACAGGGGAAGGAAG 59.188 50.000 0.00 0.00 0.00 3.46
1494 2023 2.173143 ACGTACAAAACAGGGGAAGGAA 59.827 45.455 0.00 0.00 0.00 3.36
1557 3306 5.102953 TGTTTTCCCCTCTGACTATGATG 57.897 43.478 0.00 0.00 0.00 3.07
1576 3325 6.431198 AAAAGTCACATACGAAGTGTTGTT 57.569 33.333 0.00 0.00 45.73 2.83
1579 3328 7.660208 AGGATAAAAAGTCACATACGAAGTGTT 59.340 33.333 0.00 0.00 45.73 3.32
1599 3348 5.483685 AGCGCATTCCATAGTAAGGATAA 57.516 39.130 11.47 0.00 34.56 1.75
1619 3374 4.408182 TCCTACATCTTCCTTTGCTAGC 57.592 45.455 8.10 8.10 0.00 3.42
1678 3433 9.135189 CAAAATCCCCACTGATATTTATCTTCA 57.865 33.333 0.00 0.00 33.88 3.02
1902 3666 6.924060 GGTACTCCAGTGCTACTATTGTATTG 59.076 42.308 0.00 0.00 0.00 1.90
1954 3718 9.957407 TTGCAAAACAAGCAACTAGCCAACTAG 62.957 40.741 0.00 0.00 46.13 2.57
1955 3719 8.293065 TTGCAAAACAAGCAACTAGCCAACTA 62.293 38.462 0.00 0.00 46.13 2.24
1956 3720 7.583898 TTGCAAAACAAGCAACTAGCCAACT 62.584 40.000 0.00 0.00 46.13 3.16
1957 3721 5.443745 TTGCAAAACAAGCAACTAGCCAAC 61.444 41.667 0.00 0.00 46.13 3.77
1958 3722 3.368843 TTGCAAAACAAGCAACTAGCCAA 60.369 39.130 0.00 0.00 46.13 4.52
1959 3723 2.167281 TTGCAAAACAAGCAACTAGCCA 59.833 40.909 0.00 0.00 46.13 4.75
1960 3724 2.820330 TTGCAAAACAAGCAACTAGCC 58.180 42.857 0.00 0.00 46.13 3.93
1999 3763 7.821846 ACCTTTCAGACACAAAAATGCTAAAAA 59.178 29.630 0.00 0.00 0.00 1.94
2000 3764 7.277539 CACCTTTCAGACACAAAAATGCTAAAA 59.722 33.333 0.00 0.00 0.00 1.52
2001 3765 6.756074 CACCTTTCAGACACAAAAATGCTAAA 59.244 34.615 0.00 0.00 0.00 1.85
2002 3766 6.096141 TCACCTTTCAGACACAAAAATGCTAA 59.904 34.615 0.00 0.00 0.00 3.09
2003 3767 5.592282 TCACCTTTCAGACACAAAAATGCTA 59.408 36.000 0.00 0.00 0.00 3.49
2004 3768 4.402155 TCACCTTTCAGACACAAAAATGCT 59.598 37.500 0.00 0.00 0.00 3.79
2005 3769 4.681744 TCACCTTTCAGACACAAAAATGC 58.318 39.130 0.00 0.00 0.00 3.56
2006 3770 7.593875 TTTTCACCTTTCAGACACAAAAATG 57.406 32.000 0.00 0.00 0.00 2.32
2007 3771 8.791327 AATTTTCACCTTTCAGACACAAAAAT 57.209 26.923 0.00 0.00 0.00 1.82
2008 3772 9.883142 ATAATTTTCACCTTTCAGACACAAAAA 57.117 25.926 0.00 0.00 0.00 1.94
2009 3773 9.311916 CATAATTTTCACCTTTCAGACACAAAA 57.688 29.630 0.00 0.00 0.00 2.44
2010 3774 8.690884 TCATAATTTTCACCTTTCAGACACAAA 58.309 29.630 0.00 0.00 0.00 2.83
2011 3775 8.231692 TCATAATTTTCACCTTTCAGACACAA 57.768 30.769 0.00 0.00 0.00 3.33
2012 3776 7.815840 TCATAATTTTCACCTTTCAGACACA 57.184 32.000 0.00 0.00 0.00 3.72
2058 3931 6.169094 ACATAGAGAGAAATGGTTGACACTG 58.831 40.000 0.00 0.00 0.00 3.66
2063 3938 8.198109 GCTACTTACATAGAGAGAAATGGTTGA 58.802 37.037 0.00 0.00 0.00 3.18
2079 3954 7.646314 ACTACGACGATAAATGCTACTTACAT 58.354 34.615 0.00 0.00 0.00 2.29
2081 3961 7.905031 AACTACGACGATAAATGCTACTTAC 57.095 36.000 0.00 0.00 0.00 2.34
2109 3989 5.472148 CAAAATTGGAGCAAGCATAGTTCA 58.528 37.500 0.00 0.00 0.00 3.18
2152 4040 2.750948 TGCAAGACAAGTTAGACCGAC 58.249 47.619 0.00 0.00 0.00 4.79
2156 4044 5.880341 ACAACTTTGCAAGACAAGTTAGAC 58.120 37.500 12.63 0.00 40.06 2.59
2158 4046 6.857964 CCATACAACTTTGCAAGACAAGTTAG 59.142 38.462 12.63 10.19 40.06 2.34
2168 4056 7.651304 CACTTACATTTCCATACAACTTTGCAA 59.349 33.333 0.00 0.00 0.00 4.08
2202 4090 6.566197 AGCTTTTTACAAGGTTCTGATCAG 57.434 37.500 17.07 17.07 0.00 2.90
2205 4093 6.547510 AGTCAAGCTTTTTACAAGGTTCTGAT 59.452 34.615 0.00 0.00 36.00 2.90
2216 4104 1.199327 GGCCCGAGTCAAGCTTTTTAC 59.801 52.381 0.00 0.00 0.00 2.01
2227 4115 1.017387 CTTAAATGCAGGCCCGAGTC 58.983 55.000 0.00 0.00 0.00 3.36
2232 4120 1.393603 GAGTCCTTAAATGCAGGCCC 58.606 55.000 0.00 0.00 0.00 5.80
2234 4122 2.426842 AGGAGTCCTTAAATGCAGGC 57.573 50.000 5.62 0.00 0.00 4.85
2253 4141 3.398406 TGTTTCAGCAGCGAGTTCATAA 58.602 40.909 0.00 0.00 0.00 1.90
2264 4152 6.974622 ACATAAAACTTGTTCTGTTTCAGCAG 59.025 34.615 0.00 0.00 36.72 4.24
2282 4170 9.352784 GCTGTTCATGTTAATGCTTACATAAAA 57.647 29.630 0.00 0.00 34.62 1.52
2315 4209 8.680001 CAGTATGTGTACAGGTGTATACTAACA 58.320 37.037 15.43 6.74 41.38 2.41
2316 4210 7.646922 GCAGTATGTGTACAGGTGTATACTAAC 59.353 40.741 15.43 13.03 41.38 2.34
2320 4214 5.898174 TGCAGTATGTGTACAGGTGTATAC 58.102 41.667 9.43 9.43 41.24 1.47
2326 4220 1.404181 CGCTGCAGTATGTGTACAGGT 60.404 52.381 16.64 0.00 39.31 4.00
2361 4255 1.902508 CTAGTTGCAAGGGAGGTGAGA 59.097 52.381 0.00 0.00 0.00 3.27
2495 4391 8.564574 TGTGCAAACTCTTTGTTTACTATTAGG 58.435 33.333 0.00 0.00 46.11 2.69
2532 4428 4.332268 GGAGCAACTGATTGAGAAGATGAC 59.668 45.833 0.00 0.00 38.15 3.06
2540 4436 4.216902 TCAAATGTGGAGCAACTGATTGAG 59.783 41.667 0.00 0.00 38.15 3.02
2695 5032 1.747355 GCAGGTGGATTGGATTCACAG 59.253 52.381 2.09 0.00 33.45 3.66
2698 5035 1.341285 CCTGCAGGTGGATTGGATTCA 60.341 52.381 25.53 0.00 0.00 2.57
2699 5036 1.064463 TCCTGCAGGTGGATTGGATTC 60.064 52.381 31.58 0.00 36.34 2.52
2707 5044 1.203187 AGAAGTACTCCTGCAGGTGGA 60.203 52.381 32.32 25.33 36.34 4.02
2972 5309 1.019673 CCTTGCGGGACTTGATGATG 58.980 55.000 0.00 0.00 37.23 3.07
3158 5495 2.618241 TGCAAAGTACTGCTGGAACTTG 59.382 45.455 12.27 2.58 43.07 3.16
3188 5525 0.411452 TGACCTCCTTCTGCTCCTCT 59.589 55.000 0.00 0.00 0.00 3.69
3470 5807 4.095400 TCCTCCTCCCTCCCAGCC 62.095 72.222 0.00 0.00 0.00 4.85
3632 5969 0.601057 TCGCATTCCAGTCGTTCTCA 59.399 50.000 0.00 0.00 0.00 3.27
3677 6014 1.165270 GCCGCTTGTAGTTGACCATT 58.835 50.000 0.00 0.00 0.00 3.16
3742 6079 1.101049 CAGAAGCAAACACCCCACGT 61.101 55.000 0.00 0.00 0.00 4.49
3743 6080 1.101049 ACAGAAGCAAACACCCCACG 61.101 55.000 0.00 0.00 0.00 4.94
3744 6081 1.975660 TACAGAAGCAAACACCCCAC 58.024 50.000 0.00 0.00 0.00 4.61
3745 6082 2.969821 ATACAGAAGCAAACACCCCA 57.030 45.000 0.00 0.00 0.00 4.96
3746 6083 3.826729 AGAAATACAGAAGCAAACACCCC 59.173 43.478 0.00 0.00 0.00 4.95
3747 6084 5.453567 AAGAAATACAGAAGCAAACACCC 57.546 39.130 0.00 0.00 0.00 4.61
3748 6085 5.009610 TGGAAGAAATACAGAAGCAAACACC 59.990 40.000 0.00 0.00 0.00 4.16
3767 6104 4.673311 CGGACAACAAAACGTAAATGGAAG 59.327 41.667 0.00 0.00 0.00 3.46
3777 6114 2.283058 GCGTGCGGACAACAAAACG 61.283 57.895 8.11 0.00 0.00 3.60
3811 6149 7.213178 ACCCTAAACAATGGTGAAGATAGAT 57.787 36.000 0.00 0.00 0.00 1.98
3812 6150 6.636454 ACCCTAAACAATGGTGAAGATAGA 57.364 37.500 0.00 0.00 0.00 1.98
3862 6203 3.002791 ACAACATTCTGATGCTACACGG 58.997 45.455 0.00 0.00 36.72 4.94
3874 6215 7.645058 TGAAAGGAAAGAGAAACAACATTCT 57.355 32.000 0.00 0.00 42.24 2.40
3877 6218 7.830099 AGATGAAAGGAAAGAGAAACAACAT 57.170 32.000 0.00 0.00 0.00 2.71
3890 6231 4.037923 GGACAACAGCAAAGATGAAAGGAA 59.962 41.667 0.00 0.00 0.00 3.36
3908 6249 2.168496 CCCGTCTAAGAGAGTGGACAA 58.832 52.381 0.00 0.00 0.00 3.18
3915 6256 3.082548 TGTCTGAACCCGTCTAAGAGAG 58.917 50.000 0.00 0.00 0.00 3.20
3956 6297 6.354130 ACAGTTGTTGTGTTCCTTACATAGT 58.646 36.000 0.00 0.00 38.99 2.12
4001 6344 3.976793 TCAGTGAGCAAAAGCAAGAAG 57.023 42.857 0.00 0.00 0.00 2.85
4021 6364 8.943002 GCTACAGTAATACACAAAGGTACATTT 58.057 33.333 0.00 0.00 0.00 2.32
4027 6370 9.734984 ATAAAAGCTACAGTAATACACAAAGGT 57.265 29.630 0.00 0.00 0.00 3.50
4040 6383 8.734386 CCATTTCTGAAAGATAAAAGCTACAGT 58.266 33.333 8.95 0.00 46.36 3.55
4041 6384 8.950210 TCCATTTCTGAAAGATAAAAGCTACAG 58.050 33.333 8.95 0.00 46.36 2.74
4042 6385 8.862325 TCCATTTCTGAAAGATAAAAGCTACA 57.138 30.769 8.95 0.00 46.36 2.74
4043 6386 9.167311 TCTCCATTTCTGAAAGATAAAAGCTAC 57.833 33.333 8.95 0.00 46.36 3.58
4044 6387 9.739276 TTCTCCATTTCTGAAAGATAAAAGCTA 57.261 29.630 8.95 0.00 46.36 3.32
4045 6388 8.641498 TTCTCCATTTCTGAAAGATAAAAGCT 57.359 30.769 8.95 0.00 46.36 3.74
4046 6389 9.298774 CATTCTCCATTTCTGAAAGATAAAAGC 57.701 33.333 8.95 0.00 46.36 3.51
4049 6392 9.519191 TCACATTCTCCATTTCTGAAAGATAAA 57.481 29.630 8.95 0.67 46.36 1.40
4050 6393 8.950210 GTCACATTCTCCATTTCTGAAAGATAA 58.050 33.333 8.95 1.75 46.36 1.75
4051 6394 7.278646 CGTCACATTCTCCATTTCTGAAAGATA 59.721 37.037 8.95 0.00 46.36 1.98
4052 6395 6.093219 CGTCACATTCTCCATTTCTGAAAGAT 59.907 38.462 8.95 0.00 46.36 2.40
4053 6396 5.409520 CGTCACATTCTCCATTTCTGAAAGA 59.590 40.000 8.95 0.95 44.68 2.52
4054 6397 5.180117 ACGTCACATTCTCCATTTCTGAAAG 59.820 40.000 8.95 1.57 0.00 2.62
4055 6398 5.063204 ACGTCACATTCTCCATTTCTGAAA 58.937 37.500 5.15 5.15 0.00 2.69
4056 6399 4.641396 ACGTCACATTCTCCATTTCTGAA 58.359 39.130 0.00 0.00 0.00 3.02
4057 6400 4.245660 GACGTCACATTCTCCATTTCTGA 58.754 43.478 11.55 0.00 0.00 3.27
4058 6401 3.996363 TGACGTCACATTCTCCATTTCTG 59.004 43.478 15.76 0.00 0.00 3.02
4059 6402 4.248859 CTGACGTCACATTCTCCATTTCT 58.751 43.478 15.76 0.00 0.00 2.52
4060 6403 3.181516 GCTGACGTCACATTCTCCATTTC 60.182 47.826 15.76 0.00 0.00 2.17
4061 6404 2.744202 GCTGACGTCACATTCTCCATTT 59.256 45.455 15.76 0.00 0.00 2.32
4062 6405 2.350522 GCTGACGTCACATTCTCCATT 58.649 47.619 15.76 0.00 0.00 3.16
4063 6406 1.406069 GGCTGACGTCACATTCTCCAT 60.406 52.381 15.76 0.00 0.00 3.41
4064 6407 0.037326 GGCTGACGTCACATTCTCCA 60.037 55.000 15.76 0.00 0.00 3.86
4065 6408 0.247736 AGGCTGACGTCACATTCTCC 59.752 55.000 15.76 8.84 0.00 3.71
4066 6409 1.728971 CAAGGCTGACGTCACATTCTC 59.271 52.381 15.76 0.83 0.00 2.87
4067 6410 1.344438 TCAAGGCTGACGTCACATTCT 59.656 47.619 15.76 6.76 0.00 2.40
4068 6411 1.728971 CTCAAGGCTGACGTCACATTC 59.271 52.381 15.76 4.44 0.00 2.67
4069 6412 1.344438 TCTCAAGGCTGACGTCACATT 59.656 47.619 15.76 12.61 0.00 2.71
4070 6413 0.969149 TCTCAAGGCTGACGTCACAT 59.031 50.000 15.76 6.82 0.00 3.21
4071 6414 0.315251 CTCTCAAGGCTGACGTCACA 59.685 55.000 15.76 0.00 0.00 3.58
4072 6415 0.598562 TCTCTCAAGGCTGACGTCAC 59.401 55.000 15.76 11.61 0.00 3.67
4073 6416 1.328279 TTCTCTCAAGGCTGACGTCA 58.672 50.000 18.88 18.88 0.00 4.35
4074 6417 2.029828 TCTTTCTCTCAAGGCTGACGTC 60.030 50.000 9.11 9.11 0.00 4.34
4075 6418 1.964223 TCTTTCTCTCAAGGCTGACGT 59.036 47.619 0.00 0.00 0.00 4.34
4076 6419 2.732412 TCTTTCTCTCAAGGCTGACG 57.268 50.000 0.00 0.00 0.00 4.35
4077 6420 4.394610 GGATTTCTTTCTCTCAAGGCTGAC 59.605 45.833 0.00 0.00 0.00 3.51
4078 6421 4.042062 TGGATTTCTTTCTCTCAAGGCTGA 59.958 41.667 0.00 0.00 0.00 4.26
4079 6422 4.330250 TGGATTTCTTTCTCTCAAGGCTG 58.670 43.478 0.00 0.00 0.00 4.85
4080 6423 4.288105 TCTGGATTTCTTTCTCTCAAGGCT 59.712 41.667 0.00 0.00 0.00 4.58
4081 6424 4.583871 TCTGGATTTCTTTCTCTCAAGGC 58.416 43.478 0.00 0.00 0.00 4.35
4082 6425 6.315891 GTGATCTGGATTTCTTTCTCTCAAGG 59.684 42.308 0.00 0.00 0.00 3.61
4083 6426 6.315891 GGTGATCTGGATTTCTTTCTCTCAAG 59.684 42.308 0.00 0.00 0.00 3.02
4084 6427 6.176183 GGTGATCTGGATTTCTTTCTCTCAA 58.824 40.000 0.00 0.00 0.00 3.02
4085 6428 5.338708 GGGTGATCTGGATTTCTTTCTCTCA 60.339 44.000 0.00 0.00 0.00 3.27
4086 6429 5.122519 GGGTGATCTGGATTTCTTTCTCTC 58.877 45.833 0.00 0.00 0.00 3.20
4087 6430 4.080072 GGGGTGATCTGGATTTCTTTCTCT 60.080 45.833 0.00 0.00 0.00 3.10
4088 6431 4.203226 GGGGTGATCTGGATTTCTTTCTC 58.797 47.826 0.00 0.00 0.00 2.87
4089 6432 3.053320 GGGGGTGATCTGGATTTCTTTCT 60.053 47.826 0.00 0.00 0.00 2.52
4207 6551 6.544928 TCTGCAGAAACCACTATAATCAGA 57.455 37.500 15.67 0.00 0.00 3.27
4230 6575 1.300853 GCCGCACAAGCAAAACCAT 60.301 52.632 0.00 0.00 42.27 3.55
4295 6641 0.962855 GGAGGAGCCAAAACAGGAGC 60.963 60.000 0.00 0.00 36.34 4.70
4296 6642 0.695347 AGGAGGAGCCAAAACAGGAG 59.305 55.000 0.00 0.00 40.02 3.69
4297 6643 0.401738 CAGGAGGAGCCAAAACAGGA 59.598 55.000 0.00 0.00 40.02 3.86
4298 6644 0.111253 ACAGGAGGAGCCAAAACAGG 59.889 55.000 0.00 0.00 40.02 4.00
4299 6645 1.986882 AACAGGAGGAGCCAAAACAG 58.013 50.000 0.00 0.00 40.02 3.16
4300 6646 2.430332 CAAAACAGGAGGAGCCAAAACA 59.570 45.455 0.00 0.00 40.02 2.83
4301 6647 2.224042 CCAAAACAGGAGGAGCCAAAAC 60.224 50.000 0.00 0.00 40.02 2.43
4302 6648 2.038659 CCAAAACAGGAGGAGCCAAAA 58.961 47.619 0.00 0.00 40.02 2.44
4303 6649 1.703411 CCAAAACAGGAGGAGCCAAA 58.297 50.000 0.00 0.00 40.02 3.28
4304 6650 0.827507 GCCAAAACAGGAGGAGCCAA 60.828 55.000 0.00 0.00 40.02 4.52
4305 6651 1.228552 GCCAAAACAGGAGGAGCCA 60.229 57.895 0.00 0.00 40.02 4.75
4306 6652 1.979155 GGCCAAAACAGGAGGAGCC 60.979 63.158 0.00 0.00 0.00 4.70
4473 6820 2.093973 ACCGAAACTGCATAGGAGTCAG 60.094 50.000 0.00 0.00 0.00 3.51
4533 6886 5.413499 GGCTGTATGATGTTGCTCATTTTT 58.587 37.500 0.00 0.00 37.13 1.94
4650 7003 1.605710 CCTGAAGCCTGAACAACACAG 59.394 52.381 0.00 0.00 35.43 3.66
4651 7004 1.679139 CCTGAAGCCTGAACAACACA 58.321 50.000 0.00 0.00 0.00 3.72
4652 7005 0.312102 GCCTGAAGCCTGAACAACAC 59.688 55.000 0.00 0.00 34.35 3.32
4653 7006 0.183492 AGCCTGAAGCCTGAACAACA 59.817 50.000 0.00 0.00 45.47 3.33
4654 7007 1.807142 GTAGCCTGAAGCCTGAACAAC 59.193 52.381 0.00 0.00 45.47 3.32
4655 7008 1.419762 TGTAGCCTGAAGCCTGAACAA 59.580 47.619 0.00 0.00 45.47 2.83
4656 7009 1.055849 TGTAGCCTGAAGCCTGAACA 58.944 50.000 0.00 0.00 45.47 3.18
4657 7010 2.012673 CATGTAGCCTGAAGCCTGAAC 58.987 52.381 0.00 0.00 45.47 3.18
4658 7011 1.065199 CCATGTAGCCTGAAGCCTGAA 60.065 52.381 0.00 0.00 45.47 3.02
4659 7012 0.543277 CCATGTAGCCTGAAGCCTGA 59.457 55.000 0.00 0.00 45.47 3.86
4660 7013 0.543277 TCCATGTAGCCTGAAGCCTG 59.457 55.000 0.00 0.00 45.47 4.85
4661 7014 0.543749 GTCCATGTAGCCTGAAGCCT 59.456 55.000 0.00 0.00 45.47 4.58
4662 7015 0.811616 CGTCCATGTAGCCTGAAGCC 60.812 60.000 0.00 0.00 45.47 4.35
4663 7016 0.175760 TCGTCCATGTAGCCTGAAGC 59.824 55.000 0.00 0.00 44.25 3.86
4664 7017 1.204704 TGTCGTCCATGTAGCCTGAAG 59.795 52.381 0.00 0.00 0.00 3.02
4665 7018 1.262417 TGTCGTCCATGTAGCCTGAA 58.738 50.000 0.00 0.00 0.00 3.02
4666 7019 1.136891 CATGTCGTCCATGTAGCCTGA 59.863 52.381 8.91 0.00 44.96 3.86
4667 7020 1.575244 CATGTCGTCCATGTAGCCTG 58.425 55.000 8.91 0.00 44.96 4.85
4675 7028 2.998097 CCCCACCATGTCGTCCAT 59.002 61.111 0.00 0.00 0.00 3.41
4676 7029 4.028490 GCCCCACCATGTCGTCCA 62.028 66.667 0.00 0.00 0.00 4.02
4677 7030 3.561120 TTGCCCCACCATGTCGTCC 62.561 63.158 0.00 0.00 0.00 4.79
4678 7031 1.175983 TTTTGCCCCACCATGTCGTC 61.176 55.000 0.00 0.00 0.00 4.20
4679 7032 0.757188 TTTTTGCCCCACCATGTCGT 60.757 50.000 0.00 0.00 0.00 4.34
4680 7033 0.607620 ATTTTTGCCCCACCATGTCG 59.392 50.000 0.00 0.00 0.00 4.35
4681 7034 1.901833 AGATTTTTGCCCCACCATGTC 59.098 47.619 0.00 0.00 0.00 3.06
4682 7035 1.624813 CAGATTTTTGCCCCACCATGT 59.375 47.619 0.00 0.00 0.00 3.21
4683 7036 1.624813 ACAGATTTTTGCCCCACCATG 59.375 47.619 0.00 0.00 0.00 3.66
4684 7037 2.028561 ACAGATTTTTGCCCCACCAT 57.971 45.000 0.00 0.00 0.00 3.55
4685 7038 1.799933 AACAGATTTTTGCCCCACCA 58.200 45.000 0.00 0.00 0.00 4.17
4686 7039 2.103941 TGAAACAGATTTTTGCCCCACC 59.896 45.455 0.00 0.00 0.00 4.61
4687 7040 3.467374 TGAAACAGATTTTTGCCCCAC 57.533 42.857 0.00 0.00 0.00 4.61
4688 7041 3.708631 TCTTGAAACAGATTTTTGCCCCA 59.291 39.130 0.00 0.00 0.00 4.96
4689 7042 4.039124 TCTCTTGAAACAGATTTTTGCCCC 59.961 41.667 0.00 0.00 0.00 5.80
4690 7043 5.200368 TCTCTTGAAACAGATTTTTGCCC 57.800 39.130 0.00 0.00 0.00 5.36
4691 7044 6.703165 ACAATCTCTTGAAACAGATTTTTGCC 59.297 34.615 0.00 0.00 37.27 4.52
4692 7045 7.561556 CACAATCTCTTGAAACAGATTTTTGC 58.438 34.615 0.00 0.00 37.27 3.68
4693 7046 7.437267 AGCACAATCTCTTGAAACAGATTTTTG 59.563 33.333 0.00 0.00 37.27 2.44
4694 7047 7.495055 AGCACAATCTCTTGAAACAGATTTTT 58.505 30.769 0.00 0.00 37.27 1.94
4695 7048 7.047460 AGCACAATCTCTTGAAACAGATTTT 57.953 32.000 0.00 0.00 37.27 1.82
4696 7049 6.645790 AGCACAATCTCTTGAAACAGATTT 57.354 33.333 0.00 0.00 37.27 2.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.