Multiple sequence alignment - TraesCS4A01G188400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G188400 chr4A 100.000 3768 0 0 1 3768 467257814 467261581 0.000000e+00 6959
1 TraesCS4A01G188400 chr4B 90.712 1841 90 29 699 2507 167363027 167364818 0.000000e+00 2377
2 TraesCS4A01G188400 chr4B 96.586 498 13 2 2506 3003 167364979 167365472 0.000000e+00 822
3 TraesCS4A01G188400 chr4B 87.500 288 29 3 3333 3613 167366202 167366489 3.630000e-85 326
4 TraesCS4A01G188400 chr4B 84.828 145 21 1 9 152 167362218 167362362 1.090000e-30 145
5 TraesCS4A01G188400 chr4B 94.382 89 4 1 3244 3332 167365475 167365562 6.570000e-28 135
6 TraesCS4A01G188400 chr4D 91.906 1569 55 23 664 2203 109252840 109254365 0.000000e+00 2128
7 TraesCS4A01G188400 chr4D 95.138 617 15 2 2393 3009 109254372 109254973 0.000000e+00 959
8 TraesCS4A01G188400 chr4D 85.903 227 9 7 3245 3471 109254971 109255174 1.760000e-53 220
9 TraesCS4A01G188400 chr4D 88.961 154 15 2 1 152 109265315 109265162 4.970000e-44 189
10 TraesCS4A01G188400 chr4D 92.800 125 5 4 3647 3768 109245387 109245264 1.080000e-40 178
11 TraesCS4A01G188400 chr4D 89.922 129 10 1 3463 3591 109247257 109247132 3.010000e-36 163
12 TraesCS4A01G188400 chr4D 87.200 125 8 1 153 269 109265093 109264969 6.570000e-28 135
13 TraesCS4A01G188400 chr3B 96.680 241 7 1 3008 3247 742449919 742450159 2.110000e-107 399
14 TraesCS4A01G188400 chr3B 95.547 247 10 1 3004 3249 12175019 12174773 9.810000e-106 394
15 TraesCS4A01G188400 chr2A 95.565 248 9 2 3007 3253 621924127 621924373 2.730000e-106 396
16 TraesCS4A01G188400 chr2A 93.411 258 15 2 2997 3252 753083415 753083158 7.640000e-102 381
17 TraesCS4A01G188400 chr7A 94.882 254 10 3 3008 3260 699150515 699150264 9.810000e-106 394
18 TraesCS4A01G188400 chr7A 95.181 249 10 2 3005 3251 580592453 580592701 3.530000e-105 392
19 TraesCS4A01G188400 chr7A 95.142 247 10 2 3003 3248 293097037 293097282 4.560000e-104 388
20 TraesCS4A01G188400 chr7A 94.141 256 12 3 2998 3250 677684134 677684389 1.640000e-103 387
21 TraesCS4A01G188400 chr1A 95.200 250 11 1 3004 3252 8129772 8129523 9.810000e-106 394
22 TraesCS4A01G188400 chr1B 85.876 177 13 7 1530 1706 315616515 315616679 1.080000e-40 178
23 TraesCS4A01G188400 chr1B 85.876 177 13 7 1530 1706 315835577 315835741 1.080000e-40 178


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G188400 chr4A 467257814 467261581 3767 False 6959.000000 6959 100.000000 1 3768 1 chr4A.!!$F1 3767
1 TraesCS4A01G188400 chr4B 167362218 167366489 4271 False 761.000000 2377 90.801600 9 3613 5 chr4B.!!$F1 3604
2 TraesCS4A01G188400 chr4D 109252840 109255174 2334 False 1102.333333 2128 90.982333 664 3471 3 chr4D.!!$F1 2807

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
815 1060 0.032678 CCCAGATAGCGCTGTTCGAT 59.967 55.0 22.9 4.34 41.67 3.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2787 3248 1.162698 CCATATTCAGATGCGGCAGG 58.837 55.0 9.25 0.48 0.0 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 48 8.482852 AATTTAAATCTGGACAATAGGATGGG 57.517 34.615 0.10 0.00 0.00 4.00
48 50 2.196742 TCTGGACAATAGGATGGGCT 57.803 50.000 0.00 0.00 0.00 5.19
79 81 7.182930 AGACCTAAAGGAGAAAACATATGGACT 59.817 37.037 7.80 0.60 38.94 3.85
95 97 5.636903 ATGGACTGTAAGGACATATGCTT 57.363 39.130 1.58 1.75 40.12 3.91
96 98 5.435686 TGGACTGTAAGGACATATGCTTT 57.564 39.130 1.58 1.52 37.68 3.51
97 99 5.185454 TGGACTGTAAGGACATATGCTTTG 58.815 41.667 1.58 0.00 37.68 2.77
99 101 5.294552 GGACTGTAAGGACATATGCTTTGAC 59.705 44.000 1.58 0.00 37.68 3.18
103 105 5.874810 TGTAAGGACATATGCTTTGACTGAC 59.125 40.000 1.58 0.00 37.68 3.51
114 116 2.245159 TTGACTGACAGTGAGCCAAG 57.755 50.000 14.14 0.00 0.00 3.61
115 117 0.250038 TGACTGACAGTGAGCCAAGC 60.250 55.000 14.14 0.00 0.00 4.01
121 123 1.185618 ACAGTGAGCCAAGCGGACTA 61.186 55.000 0.00 0.00 0.00 2.59
124 126 1.609501 TGAGCCAAGCGGACTACCT 60.610 57.895 0.00 0.00 0.00 3.08
127 129 1.192146 AGCCAAGCGGACTACCTGAA 61.192 55.000 0.00 0.00 0.00 3.02
129 131 0.608640 CCAAGCGGACTACCTGAACT 59.391 55.000 0.00 0.00 0.00 3.01
148 150 5.483937 TGAACTCTTCTAAAGCTCCCACATA 59.516 40.000 0.00 0.00 0.00 2.29
152 154 7.406104 ACTCTTCTAAAGCTCCCACATATTTT 58.594 34.615 0.00 0.00 0.00 1.82
163 233 7.451566 AGCTCCCACATATTTTAAAAAGTGTCT 59.548 33.333 20.51 12.19 0.00 3.41
175 245 0.250901 AAGTGTCTGGACCACATGGC 60.251 55.000 0.00 0.00 39.32 4.40
176 246 1.073025 GTGTCTGGACCACATGGCA 59.927 57.895 0.00 0.00 39.32 4.92
188 258 0.677731 ACATGGCACGGACATTCAGG 60.678 55.000 0.00 0.00 0.00 3.86
189 259 1.077501 ATGGCACGGACATTCAGGG 60.078 57.895 0.00 0.00 0.00 4.45
192 262 2.819595 CACGGACATTCAGGGGCG 60.820 66.667 0.00 0.00 0.00 6.13
200 270 3.013921 GACATTCAGGGGCGTTTTGATA 58.986 45.455 0.00 0.00 0.00 2.15
203 273 3.644966 TTCAGGGGCGTTTTGATAGAT 57.355 42.857 0.00 0.00 0.00 1.98
211 281 4.083003 GGGCGTTTTGATAGATTGTGTTGA 60.083 41.667 0.00 0.00 0.00 3.18
223 293 5.324409 AGATTGTGTTGAAGATGCCCTTAA 58.676 37.500 0.00 0.00 34.68 1.85
230 302 7.093068 TGTGTTGAAGATGCCCTTAACTATCTA 60.093 37.037 0.00 0.00 34.68 1.98
237 309 7.551585 AGATGCCCTTAACTATCTAATCATCG 58.448 38.462 0.00 0.00 33.79 3.84
240 312 8.362464 TGCCCTTAACTATCTAATCATCGTAT 57.638 34.615 0.00 0.00 0.00 3.06
241 313 8.251026 TGCCCTTAACTATCTAATCATCGTATG 58.749 37.037 0.00 0.00 0.00 2.39
242 314 8.467598 GCCCTTAACTATCTAATCATCGTATGA 58.532 37.037 0.99 0.99 44.55 2.15
252 324 7.735917 TCTAATCATCGTATGAACTTTCCCAT 58.264 34.615 2.41 0.00 43.50 4.00
253 325 6.624352 AATCATCGTATGAACTTTCCCATG 57.376 37.500 2.41 0.00 43.50 3.66
254 326 5.351948 TCATCGTATGAACTTTCCCATGA 57.648 39.130 0.00 0.00 36.11 3.07
255 327 5.739959 TCATCGTATGAACTTTCCCATGAA 58.260 37.500 0.00 0.00 36.11 2.57
256 328 6.356556 TCATCGTATGAACTTTCCCATGAAT 58.643 36.000 0.00 0.00 36.11 2.57
257 329 6.828273 TCATCGTATGAACTTTCCCATGAATT 59.172 34.615 0.00 0.00 36.11 2.17
258 330 6.677781 TCGTATGAACTTTCCCATGAATTC 57.322 37.500 0.00 0.00 0.00 2.17
259 331 5.293324 TCGTATGAACTTTCCCATGAATTCG 59.707 40.000 0.04 0.00 0.00 3.34
262 334 5.371115 TGAACTTTCCCATGAATTCGTTC 57.629 39.130 0.00 4.77 35.42 3.95
271 343 4.025979 CCCATGAATTCGTTCGTAGCTAAC 60.026 45.833 0.00 0.00 0.00 2.34
277 349 6.588756 TGAATTCGTTCGTAGCTAACTTTCAT 59.411 34.615 0.00 0.00 0.00 2.57
281 353 7.445900 TCGTTCGTAGCTAACTTTCATAATG 57.554 36.000 0.00 0.00 0.00 1.90
282 354 6.020121 TCGTTCGTAGCTAACTTTCATAATGC 60.020 38.462 0.00 0.00 0.00 3.56
285 357 8.814235 GTTCGTAGCTAACTTTCATAATGCTTA 58.186 33.333 0.00 0.00 0.00 3.09
290 362 6.039829 AGCTAACTTTCATAATGCTTAAGGCC 59.960 38.462 4.29 0.00 40.92 5.19
310 391 3.499918 GCCTTGTTCGGATCCAATCATAG 59.500 47.826 13.41 1.38 0.00 2.23
323 404 6.549912 TCCAATCATAGAGAAATTCGCATG 57.450 37.500 0.00 1.99 0.00 4.06
324 405 6.057533 TCCAATCATAGAGAAATTCGCATGT 58.942 36.000 0.00 0.00 0.00 3.21
325 406 6.017687 TCCAATCATAGAGAAATTCGCATGTG 60.018 38.462 0.00 0.00 0.00 3.21
328 409 2.907910 AGAGAAATTCGCATGTGCAC 57.092 45.000 10.75 10.75 42.21 4.57
361 442 4.338400 CAGTCCTACACGACCTCATGATTA 59.662 45.833 0.00 0.00 32.91 1.75
372 453 5.028549 ACCTCATGATTACTTTGCGATCT 57.971 39.130 0.00 0.00 0.00 2.75
374 455 4.319333 CCTCATGATTACTTTGCGATCTGC 60.319 45.833 0.00 3.07 46.70 4.26
391 472 2.223144 TCTGCAAAGTCGTTGGATTTCG 59.777 45.455 0.60 0.00 36.90 3.46
394 475 2.307049 CAAAGTCGTTGGATTTCGCAC 58.693 47.619 0.00 0.00 33.18 5.34
395 476 1.588674 AAGTCGTTGGATTTCGCACA 58.411 45.000 0.00 0.00 0.00 4.57
397 478 1.944024 AGTCGTTGGATTTCGCACAAA 59.056 42.857 0.00 0.00 0.00 2.83
398 479 2.356382 AGTCGTTGGATTTCGCACAAAA 59.644 40.909 0.00 0.00 0.00 2.44
400 481 2.097629 TCGTTGGATTTCGCACAAAACA 59.902 40.909 0.00 0.00 0.00 2.83
401 482 2.215363 CGTTGGATTTCGCACAAAACAC 59.785 45.455 0.00 0.00 0.00 3.32
402 483 2.112475 TGGATTTCGCACAAAACACG 57.888 45.000 0.00 0.00 0.00 4.49
403 484 1.402259 TGGATTTCGCACAAAACACGT 59.598 42.857 0.00 0.00 0.00 4.49
407 489 2.166741 TTCGCACAAAACACGTCAAG 57.833 45.000 0.00 0.00 0.00 3.02
408 490 1.080298 TCGCACAAAACACGTCAAGT 58.920 45.000 0.00 0.00 0.00 3.16
602 842 5.715434 TTAGTGGTTGTTGGATTTTAGCC 57.285 39.130 0.00 0.00 0.00 3.93
603 843 3.844640 AGTGGTTGTTGGATTTTAGCCT 58.155 40.909 0.00 0.00 0.00 4.58
604 844 4.223144 AGTGGTTGTTGGATTTTAGCCTT 58.777 39.130 0.00 0.00 0.00 4.35
605 845 4.653801 AGTGGTTGTTGGATTTTAGCCTTT 59.346 37.500 0.00 0.00 0.00 3.11
606 846 5.130311 AGTGGTTGTTGGATTTTAGCCTTTT 59.870 36.000 0.00 0.00 0.00 2.27
607 847 5.820423 GTGGTTGTTGGATTTTAGCCTTTTT 59.180 36.000 0.00 0.00 0.00 1.94
630 870 6.969993 TTTAGGCAATGTTGGAGTTTAACT 57.030 33.333 0.00 0.00 0.00 2.24
631 871 6.969993 TTAGGCAATGTTGGAGTTTAACTT 57.030 33.333 0.00 0.00 0.00 2.66
632 872 5.869649 AGGCAATGTTGGAGTTTAACTTT 57.130 34.783 0.00 0.00 0.00 2.66
633 873 6.233905 AGGCAATGTTGGAGTTTAACTTTT 57.766 33.333 0.00 0.00 0.00 2.27
634 874 6.649155 AGGCAATGTTGGAGTTTAACTTTTT 58.351 32.000 0.00 0.00 0.00 1.94
656 896 5.418310 TTTTTGAGTCGATGTTGGAGTTC 57.582 39.130 0.00 0.00 0.00 3.01
657 897 3.744238 TTGAGTCGATGTTGGAGTTCA 57.256 42.857 0.00 0.00 0.00 3.18
658 898 3.744238 TGAGTCGATGTTGGAGTTCAA 57.256 42.857 0.00 0.00 0.00 2.69
712 953 6.925610 ACTAGTTTACGTATGTGTCCGATA 57.074 37.500 0.00 0.00 0.00 2.92
806 1051 2.028190 CTCGTGGCCCAGATAGCG 59.972 66.667 0.00 0.00 0.00 4.26
807 1052 4.221422 TCGTGGCCCAGATAGCGC 62.221 66.667 0.00 0.00 0.00 5.92
808 1053 4.227134 CGTGGCCCAGATAGCGCT 62.227 66.667 17.26 17.26 0.00 5.92
809 1054 2.590007 GTGGCCCAGATAGCGCTG 60.590 66.667 22.90 3.25 35.66 5.18
810 1055 3.083349 TGGCCCAGATAGCGCTGT 61.083 61.111 22.90 15.10 34.06 4.40
811 1056 2.190578 GGCCCAGATAGCGCTGTT 59.809 61.111 22.90 7.39 34.06 3.16
812 1057 1.889573 GGCCCAGATAGCGCTGTTC 60.890 63.158 22.90 16.88 34.06 3.18
813 1058 2.240500 GCCCAGATAGCGCTGTTCG 61.241 63.158 22.90 8.52 42.12 3.95
814 1059 1.437573 CCCAGATAGCGCTGTTCGA 59.562 57.895 22.90 0.00 41.67 3.71
815 1060 0.032678 CCCAGATAGCGCTGTTCGAT 59.967 55.000 22.90 4.34 41.67 3.59
816 1061 1.413382 CCAGATAGCGCTGTTCGATC 58.587 55.000 22.90 14.75 41.67 3.69
817 1062 1.048494 CAGATAGCGCTGTTCGATCG 58.952 55.000 22.90 9.36 41.67 3.69
851 1109 5.208121 TCAACCCTCCTCACAAAAGAAAAT 58.792 37.500 0.00 0.00 0.00 1.82
855 1113 7.669089 ACCCTCCTCACAAAAGAAAATAAAA 57.331 32.000 0.00 0.00 0.00 1.52
857 1115 8.713971 ACCCTCCTCACAAAAGAAAATAAAAAT 58.286 29.630 0.00 0.00 0.00 1.82
1064 1328 3.868476 AGAGGTAACCCTTCTAACCCT 57.132 47.619 0.00 0.00 42.86 4.34
1065 1329 4.980751 AGAGGTAACCCTTCTAACCCTA 57.019 45.455 0.00 0.00 42.86 3.53
1066 1330 4.881361 AGAGGTAACCCTTCTAACCCTAG 58.119 47.826 0.00 0.00 42.86 3.02
1067 1331 4.547427 AGAGGTAACCCTTCTAACCCTAGA 59.453 45.833 0.00 0.00 42.86 2.43
1068 1332 4.618635 AGGTAACCCTTCTAACCCTAGAC 58.381 47.826 0.00 0.00 38.13 2.59
1069 1333 3.708631 GGTAACCCTTCTAACCCTAGACC 59.291 52.174 0.00 0.00 33.73 3.85
1070 1334 3.868476 AACCCTTCTAACCCTAGACCT 57.132 47.619 0.00 0.00 33.73 3.85
1071 1335 4.980751 AACCCTTCTAACCCTAGACCTA 57.019 45.455 0.00 0.00 33.73 3.08
1072 1336 4.539596 ACCCTTCTAACCCTAGACCTAG 57.460 50.000 0.00 0.00 33.73 3.02
1086 1362 2.177451 AGACCTAGGCCTAGACCCTAAC 59.823 54.545 36.80 19.34 34.68 2.34
1114 1390 2.267961 CAGTCGGGGTAACAGGGC 59.732 66.667 0.00 0.00 39.74 5.19
1115 1391 3.387947 AGTCGGGGTAACAGGGCG 61.388 66.667 0.00 0.00 39.74 6.13
1136 1412 0.319040 CATCGCGGATCCTGGTAGTG 60.319 60.000 10.75 0.15 0.00 2.74
1163 1439 2.440247 CCATCGGGGCCTTGGTTC 60.440 66.667 0.84 0.00 0.00 3.62
1229 1508 2.273370 TGTAATCGTCGCCAGAAGAC 57.727 50.000 0.00 0.00 37.68 3.01
1418 1698 3.567478 GGAGTTATGGTGCTCCTGAAT 57.433 47.619 6.34 0.00 45.78 2.57
1420 1700 3.879892 GGAGTTATGGTGCTCCTGAATTC 59.120 47.826 6.34 0.00 45.78 2.17
1463 1743 5.193679 GCAGGTTAGTATTGGGACTGAATT 58.806 41.667 0.00 0.00 0.00 2.17
1526 1822 1.680338 ACCTGTCAACTCACCAAAGC 58.320 50.000 0.00 0.00 0.00 3.51
1536 1832 4.489679 ACTCACCAAAGCGATTTTCTTC 57.510 40.909 0.00 0.00 0.00 2.87
1574 1870 1.268899 CTTGTCCAGCTGCTCAAAAGG 59.731 52.381 8.66 0.00 0.00 3.11
1591 1887 4.510167 AAAGGTCCCAGATCCATTGTAG 57.490 45.455 0.00 0.00 0.00 2.74
1593 1889 3.736094 AGGTCCCAGATCCATTGTAGAA 58.264 45.455 0.00 0.00 0.00 2.10
1606 1902 8.816414 ATCCATTGTAGAACTGGATGCAGTCC 62.816 46.154 21.00 8.14 45.75 3.85
1673 1970 6.972490 ACTACTCTAGCCCTTACTCTAAACT 58.028 40.000 0.00 0.00 0.00 2.66
1674 1971 7.056006 ACTACTCTAGCCCTTACTCTAAACTC 58.944 42.308 0.00 0.00 0.00 3.01
1675 1972 6.082228 ACTCTAGCCCTTACTCTAAACTCT 57.918 41.667 0.00 0.00 0.00 3.24
1676 1973 7.210618 ACTCTAGCCCTTACTCTAAACTCTA 57.789 40.000 0.00 0.00 0.00 2.43
1677 1974 7.641249 ACTCTAGCCCTTACTCTAAACTCTAA 58.359 38.462 0.00 0.00 0.00 2.10
1678 1975 8.114743 ACTCTAGCCCTTACTCTAAACTCTAAA 58.885 37.037 0.00 0.00 0.00 1.85
1679 1976 8.291191 TCTAGCCCTTACTCTAAACTCTAAAC 57.709 38.462 0.00 0.00 0.00 2.01
1727 2024 2.313172 GCAGCACGTGACTGTCCAG 61.313 63.158 28.34 12.85 37.47 3.86
1800 2097 2.910544 TGGAGGGTACAAGGAAGCTTA 58.089 47.619 0.00 0.00 0.00 3.09
2038 2336 8.660295 ATTTGCTGATGGTTATATGATGGAAT 57.340 30.769 0.00 0.00 0.00 3.01
2205 2504 6.272318 TCTTTCATACAAAAACACTTGCCTG 58.728 36.000 0.00 0.00 0.00 4.85
2259 2558 4.409218 CGCCGCATGCAACTTGCT 62.409 61.111 19.57 0.00 45.31 3.91
2263 2562 1.794785 CGCATGCAACTTGCTGTCG 60.795 57.895 19.57 10.52 45.31 4.35
2264 2563 2.084681 GCATGCAACTTGCTGTCGC 61.085 57.895 14.21 8.09 45.31 5.19
2284 2583 3.544834 CGCATCTTGGAAGCTTATGTTCG 60.545 47.826 0.00 0.00 0.00 3.95
2299 2598 3.822594 TGTTCGTGGTCATTTATGTGC 57.177 42.857 0.00 0.00 0.00 4.57
2350 2649 7.544566 ACATCAGAGTACACGTTTAATAGTTGG 59.455 37.037 0.00 0.00 0.00 3.77
2351 2650 7.218228 TCAGAGTACACGTTTAATAGTTGGA 57.782 36.000 0.00 0.00 0.00 3.53
2379 2678 6.724441 CCAACTTAAGAGGAAAAATAGGGGTT 59.276 38.462 10.09 0.00 0.00 4.11
2380 2679 7.093902 CCAACTTAAGAGGAAAAATAGGGGTTC 60.094 40.741 10.09 0.00 0.00 3.62
2381 2680 7.098845 ACTTAAGAGGAAAAATAGGGGTTCA 57.901 36.000 10.09 0.00 0.00 3.18
2382 2681 6.946583 ACTTAAGAGGAAAAATAGGGGTTCAC 59.053 38.462 10.09 0.00 0.00 3.18
2383 2682 5.333566 AAGAGGAAAAATAGGGGTTCACA 57.666 39.130 0.00 0.00 0.00 3.58
2384 2683 5.536497 AGAGGAAAAATAGGGGTTCACAT 57.464 39.130 0.00 0.00 0.00 3.21
2385 2684 6.652205 AGAGGAAAAATAGGGGTTCACATA 57.348 37.500 0.00 0.00 0.00 2.29
2386 2685 7.039722 AGAGGAAAAATAGGGGTTCACATAA 57.960 36.000 0.00 0.00 0.00 1.90
2462 2761 1.578215 ATGCTGCAGGGACCCTCATT 61.578 55.000 17.12 0.00 0.00 2.57
2788 3249 1.501582 ACCAGAATAGGTCTCCTGCC 58.498 55.000 0.00 0.00 37.28 4.85
2789 3250 1.008938 ACCAGAATAGGTCTCCTGCCT 59.991 52.381 0.00 0.00 37.28 4.75
2790 3251 1.415659 CCAGAATAGGTCTCCTGCCTG 59.584 57.143 0.00 3.54 37.54 4.85
2808 3269 2.074576 CTGCCGCATCTGAATATGGAG 58.925 52.381 0.00 0.00 0.00 3.86
2816 3277 5.934043 CGCATCTGAATATGGAGTCCAATAA 59.066 40.000 17.71 5.26 36.95 1.40
2835 3296 5.806654 ATAAAGTTGATGCAAACCACCTT 57.193 34.783 0.00 0.00 0.00 3.50
2895 3356 2.288640 GCTGTTGGACCGTAGTTAGTGT 60.289 50.000 0.00 0.00 0.00 3.55
2915 3376 2.028130 TGACGGTTGCCAGAAATTTGT 58.972 42.857 0.00 0.00 0.00 2.83
2954 3415 8.848474 AATGTTACTGCTACTATGTTTTCACT 57.152 30.769 0.00 0.00 0.00 3.41
2978 3439 2.434658 TATGGGCAGATGCTACGGCG 62.435 60.000 4.80 4.80 42.25 6.46
3012 3473 8.810652 TTTGAGCAATTATGTTTTTGTACTCC 57.189 30.769 0.00 0.00 0.00 3.85
3013 3474 6.919721 TGAGCAATTATGTTTTTGTACTCCC 58.080 36.000 0.00 0.00 0.00 4.30
3014 3475 6.719370 TGAGCAATTATGTTTTTGTACTCCCT 59.281 34.615 0.00 0.00 0.00 4.20
3015 3476 7.094377 TGAGCAATTATGTTTTTGTACTCCCTC 60.094 37.037 0.00 0.00 0.00 4.30
3016 3477 6.152831 AGCAATTATGTTTTTGTACTCCCTCC 59.847 38.462 0.00 0.00 0.00 4.30
3017 3478 6.071616 GCAATTATGTTTTTGTACTCCCTCCA 60.072 38.462 0.00 0.00 0.00 3.86
3018 3479 7.363793 GCAATTATGTTTTTGTACTCCCTCCAT 60.364 37.037 0.00 0.00 0.00 3.41
3019 3480 8.531146 CAATTATGTTTTTGTACTCCCTCCATT 58.469 33.333 0.00 0.00 0.00 3.16
3020 3481 8.664669 ATTATGTTTTTGTACTCCCTCCATTT 57.335 30.769 0.00 0.00 0.00 2.32
3021 3482 6.590234 ATGTTTTTGTACTCCCTCCATTTC 57.410 37.500 0.00 0.00 0.00 2.17
3022 3483 5.450453 TGTTTTTGTACTCCCTCCATTTCA 58.550 37.500 0.00 0.00 0.00 2.69
3023 3484 5.300792 TGTTTTTGTACTCCCTCCATTTCAC 59.699 40.000 0.00 0.00 0.00 3.18
3024 3485 4.715534 TTTGTACTCCCTCCATTTCACA 57.284 40.909 0.00 0.00 0.00 3.58
3025 3486 4.715534 TTGTACTCCCTCCATTTCACAA 57.284 40.909 0.00 0.00 0.00 3.33
3026 3487 4.927267 TGTACTCCCTCCATTTCACAAT 57.073 40.909 0.00 0.00 0.00 2.71
3027 3488 4.588899 TGTACTCCCTCCATTTCACAATG 58.411 43.478 0.00 0.00 39.79 2.82
3028 3489 3.814504 ACTCCCTCCATTTCACAATGT 57.185 42.857 0.00 0.00 38.58 2.71
3029 3490 4.927267 ACTCCCTCCATTTCACAATGTA 57.073 40.909 0.00 0.00 38.58 2.29
3030 3491 4.848357 ACTCCCTCCATTTCACAATGTAG 58.152 43.478 0.00 0.00 38.58 2.74
3031 3492 4.289672 ACTCCCTCCATTTCACAATGTAGT 59.710 41.667 0.00 0.00 38.58 2.73
3032 3493 4.588899 TCCCTCCATTTCACAATGTAGTG 58.411 43.478 0.00 0.00 38.58 2.74
3033 3494 3.129287 CCCTCCATTTCACAATGTAGTGC 59.871 47.826 0.00 0.00 38.58 4.40
3034 3495 4.012374 CCTCCATTTCACAATGTAGTGCT 58.988 43.478 0.00 0.00 38.58 4.40
3035 3496 4.460382 CCTCCATTTCACAATGTAGTGCTT 59.540 41.667 0.00 0.00 38.58 3.91
3036 3497 5.392380 CCTCCATTTCACAATGTAGTGCTTC 60.392 44.000 0.00 0.00 38.58 3.86
3037 3498 4.458989 TCCATTTCACAATGTAGTGCTTCC 59.541 41.667 0.00 0.00 38.58 3.46
3038 3499 4.460382 CCATTTCACAATGTAGTGCTTCCT 59.540 41.667 0.00 0.00 38.58 3.36
3039 3500 5.047802 CCATTTCACAATGTAGTGCTTCCTT 60.048 40.000 0.00 0.00 38.58 3.36
3040 3501 6.449698 CATTTCACAATGTAGTGCTTCCTTT 58.550 36.000 0.00 0.00 39.35 3.11
3041 3502 7.309133 CCATTTCACAATGTAGTGCTTCCTTTA 60.309 37.037 0.00 0.00 38.58 1.85
3042 3503 7.759489 TTTCACAATGTAGTGCTTCCTTTAT 57.241 32.000 0.00 0.00 39.35 1.40
3043 3504 6.985188 TCACAATGTAGTGCTTCCTTTATC 57.015 37.500 0.00 0.00 39.35 1.75
3044 3505 5.880332 TCACAATGTAGTGCTTCCTTTATCC 59.120 40.000 0.00 0.00 39.35 2.59
3045 3506 5.647658 CACAATGTAGTGCTTCCTTTATCCA 59.352 40.000 0.00 0.00 32.04 3.41
3046 3507 5.648092 ACAATGTAGTGCTTCCTTTATCCAC 59.352 40.000 0.00 0.00 0.00 4.02
3047 3508 3.857052 TGTAGTGCTTCCTTTATCCACG 58.143 45.455 0.00 0.00 0.00 4.94
3048 3509 3.259876 TGTAGTGCTTCCTTTATCCACGT 59.740 43.478 0.00 0.00 0.00 4.49
3049 3510 2.699954 AGTGCTTCCTTTATCCACGTG 58.300 47.619 9.08 9.08 0.00 4.49
3050 3511 1.130561 GTGCTTCCTTTATCCACGTGC 59.869 52.381 10.91 0.00 0.00 5.34
3051 3512 1.003118 TGCTTCCTTTATCCACGTGCT 59.997 47.619 10.91 1.67 0.00 4.40
3052 3513 2.084546 GCTTCCTTTATCCACGTGCTT 58.915 47.619 10.91 1.47 0.00 3.91
3053 3514 2.096013 GCTTCCTTTATCCACGTGCTTC 59.904 50.000 10.91 0.00 0.00 3.86
3054 3515 3.334691 CTTCCTTTATCCACGTGCTTCA 58.665 45.455 10.91 0.00 0.00 3.02
3055 3516 3.410631 TCCTTTATCCACGTGCTTCAA 57.589 42.857 10.91 0.00 0.00 2.69
3056 3517 3.071479 TCCTTTATCCACGTGCTTCAAC 58.929 45.455 10.91 0.00 0.00 3.18
3057 3518 3.074412 CCTTTATCCACGTGCTTCAACT 58.926 45.455 10.91 0.00 0.00 3.16
3058 3519 3.502211 CCTTTATCCACGTGCTTCAACTT 59.498 43.478 10.91 0.00 0.00 2.66
3059 3520 4.023193 CCTTTATCCACGTGCTTCAACTTT 60.023 41.667 10.91 0.00 0.00 2.66
3060 3521 4.481930 TTATCCACGTGCTTCAACTTTG 57.518 40.909 10.91 0.00 0.00 2.77
3061 3522 2.031258 TCCACGTGCTTCAACTTTGA 57.969 45.000 10.91 0.00 34.92 2.69
3062 3523 1.668751 TCCACGTGCTTCAACTTTGAC 59.331 47.619 10.91 0.00 36.83 3.18
3063 3524 1.268539 CCACGTGCTTCAACTTTGACC 60.269 52.381 10.91 0.00 36.83 4.02
3064 3525 0.655733 ACGTGCTTCAACTTTGACCG 59.344 50.000 0.00 0.00 36.83 4.79
3065 3526 0.655733 CGTGCTTCAACTTTGACCGT 59.344 50.000 0.00 0.00 36.83 4.83
3066 3527 1.862201 CGTGCTTCAACTTTGACCGTA 59.138 47.619 0.00 0.00 36.83 4.02
3067 3528 2.285756 CGTGCTTCAACTTTGACCGTAA 59.714 45.455 0.00 0.00 36.83 3.18
3068 3529 3.242478 CGTGCTTCAACTTTGACCGTAAA 60.242 43.478 0.00 0.00 36.83 2.01
3069 3530 4.553938 CGTGCTTCAACTTTGACCGTAAAT 60.554 41.667 0.00 0.00 36.83 1.40
3070 3531 5.278604 GTGCTTCAACTTTGACCGTAAATT 58.721 37.500 0.00 0.00 36.83 1.82
3071 3532 5.746721 GTGCTTCAACTTTGACCGTAAATTT 59.253 36.000 0.00 0.00 36.83 1.82
3072 3533 6.913673 GTGCTTCAACTTTGACCGTAAATTTA 59.086 34.615 0.00 0.00 36.83 1.40
3073 3534 7.432838 GTGCTTCAACTTTGACCGTAAATTTAA 59.567 33.333 0.00 0.00 36.83 1.52
3074 3535 7.432838 TGCTTCAACTTTGACCGTAAATTTAAC 59.567 33.333 0.00 0.00 36.83 2.01
3075 3536 7.646526 GCTTCAACTTTGACCGTAAATTTAACT 59.353 33.333 0.00 0.00 36.83 2.24
3077 3538 9.934190 TTCAACTTTGACCGTAAATTTAACTAC 57.066 29.630 0.00 0.00 36.83 2.73
3078 3539 8.558700 TCAACTTTGACCGTAAATTTAACTACC 58.441 33.333 0.00 0.00 31.01 3.18
3079 3540 8.344098 CAACTTTGACCGTAAATTTAACTACCA 58.656 33.333 0.00 0.00 0.00 3.25
3080 3541 8.449251 ACTTTGACCGTAAATTTAACTACCAA 57.551 30.769 0.00 0.00 0.00 3.67
3081 3542 8.562052 ACTTTGACCGTAAATTTAACTACCAAG 58.438 33.333 0.00 2.45 0.00 3.61
3082 3543 8.674263 TTTGACCGTAAATTTAACTACCAAGA 57.326 30.769 0.00 0.00 0.00 3.02
3083 3544 7.656707 TGACCGTAAATTTAACTACCAAGAC 57.343 36.000 0.00 0.00 0.00 3.01
3084 3545 6.650390 TGACCGTAAATTTAACTACCAAGACC 59.350 38.462 0.00 0.00 0.00 3.85
3085 3546 5.639082 ACCGTAAATTTAACTACCAAGACCG 59.361 40.000 0.00 0.00 0.00 4.79
3086 3547 5.868801 CCGTAAATTTAACTACCAAGACCGA 59.131 40.000 0.00 0.00 0.00 4.69
3087 3548 6.536224 CCGTAAATTTAACTACCAAGACCGAT 59.464 38.462 0.00 0.00 0.00 4.18
3088 3549 7.064966 CCGTAAATTTAACTACCAAGACCGATT 59.935 37.037 0.00 0.00 0.00 3.34
3089 3550 7.901377 CGTAAATTTAACTACCAAGACCGATTG 59.099 37.037 0.00 0.00 0.00 2.67
3090 3551 5.813080 ATTTAACTACCAAGACCGATTGC 57.187 39.130 0.00 0.00 0.00 3.56
3091 3552 1.722011 AACTACCAAGACCGATTGCG 58.278 50.000 0.00 0.00 37.24 4.85
3119 3580 9.480053 CGGGAGCAAAAATTATATCAATGAATT 57.520 29.630 0.00 0.00 0.00 2.17
3168 3629 4.268720 TTTTTCCCTGCCGCAGTT 57.731 50.000 18.98 0.00 0.00 3.16
3169 3630 1.739049 TTTTTCCCTGCCGCAGTTG 59.261 52.632 18.98 9.87 0.00 3.16
3170 3631 1.743321 TTTTTCCCTGCCGCAGTTGG 61.743 55.000 18.98 13.64 0.00 3.77
3171 3632 2.920076 TTTTCCCTGCCGCAGTTGGT 62.920 55.000 18.98 0.00 0.00 3.67
3172 3633 3.842925 TTCCCTGCCGCAGTTGGTC 62.843 63.158 18.98 0.00 0.00 4.02
3173 3634 4.335647 CCCTGCCGCAGTTGGTCT 62.336 66.667 18.98 0.00 0.00 3.85
3174 3635 2.743928 CCTGCCGCAGTTGGTCTC 60.744 66.667 18.98 0.00 0.00 3.36
3175 3636 3.114616 CTGCCGCAGTTGGTCTCG 61.115 66.667 12.54 0.00 0.00 4.04
3176 3637 3.865929 CTGCCGCAGTTGGTCTCGT 62.866 63.158 12.54 0.00 0.00 4.18
3177 3638 2.665185 GCCGCAGTTGGTCTCGTT 60.665 61.111 0.00 0.00 0.00 3.85
3178 3639 2.954753 GCCGCAGTTGGTCTCGTTG 61.955 63.158 0.00 0.00 0.00 4.10
3179 3640 2.317609 CCGCAGTTGGTCTCGTTGG 61.318 63.158 0.00 0.00 0.00 3.77
3180 3641 1.594293 CGCAGTTGGTCTCGTTGGT 60.594 57.895 0.00 0.00 0.00 3.67
3181 3642 1.157870 CGCAGTTGGTCTCGTTGGTT 61.158 55.000 0.00 0.00 0.00 3.67
3182 3643 1.870580 CGCAGTTGGTCTCGTTGGTTA 60.871 52.381 0.00 0.00 0.00 2.85
3183 3644 2.215196 GCAGTTGGTCTCGTTGGTTAA 58.785 47.619 0.00 0.00 0.00 2.01
3184 3645 2.614983 GCAGTTGGTCTCGTTGGTTAAA 59.385 45.455 0.00 0.00 0.00 1.52
3185 3646 3.252458 GCAGTTGGTCTCGTTGGTTAAAT 59.748 43.478 0.00 0.00 0.00 1.40
3186 3647 4.261447 GCAGTTGGTCTCGTTGGTTAAATT 60.261 41.667 0.00 0.00 0.00 1.82
3187 3648 5.735070 GCAGTTGGTCTCGTTGGTTAAATTT 60.735 40.000 0.00 0.00 0.00 1.82
3188 3649 6.513720 GCAGTTGGTCTCGTTGGTTAAATTTA 60.514 38.462 0.00 0.00 0.00 1.40
3189 3650 7.590279 CAGTTGGTCTCGTTGGTTAAATTTAT 58.410 34.615 0.00 0.00 0.00 1.40
3190 3651 7.537306 CAGTTGGTCTCGTTGGTTAAATTTATG 59.463 37.037 0.00 0.00 0.00 1.90
3191 3652 6.503589 TGGTCTCGTTGGTTAAATTTATGG 57.496 37.500 0.00 0.00 0.00 2.74
3192 3653 6.005198 TGGTCTCGTTGGTTAAATTTATGGT 58.995 36.000 0.00 0.00 0.00 3.55
3193 3654 6.149807 TGGTCTCGTTGGTTAAATTTATGGTC 59.850 38.462 0.00 0.00 0.00 4.02
3194 3655 6.149807 GGTCTCGTTGGTTAAATTTATGGTCA 59.850 38.462 0.00 0.00 0.00 4.02
3195 3656 7.308710 GGTCTCGTTGGTTAAATTTATGGTCAA 60.309 37.037 0.00 0.00 0.00 3.18
3196 3657 8.077386 GTCTCGTTGGTTAAATTTATGGTCAAA 58.923 33.333 0.00 0.00 0.00 2.69
3197 3658 8.293867 TCTCGTTGGTTAAATTTATGGTCAAAG 58.706 33.333 0.00 4.88 0.00 2.77
3198 3659 7.942990 TCGTTGGTTAAATTTATGGTCAAAGT 58.057 30.769 0.00 0.00 0.00 2.66
3199 3660 8.414778 TCGTTGGTTAAATTTATGGTCAAAGTT 58.585 29.630 0.00 0.00 31.36 2.66
3200 3661 8.484008 CGTTGGTTAAATTTATGGTCAAAGTTG 58.516 33.333 0.00 0.00 29.44 3.16
3201 3662 8.769891 GTTGGTTAAATTTATGGTCAAAGTTGG 58.230 33.333 0.00 0.00 29.44 3.77
3202 3663 8.251383 TGGTTAAATTTATGGTCAAAGTTGGA 57.749 30.769 0.00 0.00 29.44 3.53
3203 3664 8.145122 TGGTTAAATTTATGGTCAAAGTTGGAC 58.855 33.333 1.31 1.31 29.44 4.02
3210 3671 2.814280 GTCAAAGTTGGACCTCGAGA 57.186 50.000 15.71 0.00 0.00 4.04
3211 3672 3.107642 GTCAAAGTTGGACCTCGAGAA 57.892 47.619 15.71 0.00 0.00 2.87
3212 3673 3.060602 GTCAAAGTTGGACCTCGAGAAG 58.939 50.000 15.71 0.00 0.00 2.85
3213 3674 1.801178 CAAAGTTGGACCTCGAGAAGC 59.199 52.381 15.71 2.10 0.00 3.86
3214 3675 0.038159 AAGTTGGACCTCGAGAAGCG 60.038 55.000 15.71 0.00 42.69 4.68
3215 3676 2.095252 GTTGGACCTCGAGAAGCGC 61.095 63.158 15.71 0.00 40.61 5.92
3216 3677 3.626680 TTGGACCTCGAGAAGCGCG 62.627 63.158 15.71 0.00 40.61 6.86
3233 3694 3.683115 CGCGGACGCACTATATTTTAG 57.317 47.619 17.35 0.00 42.06 1.85
3234 3695 3.302555 CGCGGACGCACTATATTTTAGA 58.697 45.455 17.35 0.00 42.06 2.10
3235 3696 3.732219 CGCGGACGCACTATATTTTAGAA 59.268 43.478 17.35 0.00 42.06 2.10
3236 3697 4.384846 CGCGGACGCACTATATTTTAGAAT 59.615 41.667 17.35 0.00 42.06 2.40
3237 3698 5.609088 GCGGACGCACTATATTTTAGAATG 58.391 41.667 12.31 0.00 41.49 2.67
3238 3699 5.389516 GCGGACGCACTATATTTTAGAATGG 60.390 44.000 12.31 0.00 41.49 3.16
3239 3700 5.924254 CGGACGCACTATATTTTAGAATGGA 59.076 40.000 0.00 0.00 0.00 3.41
3240 3701 6.089551 CGGACGCACTATATTTTAGAATGGAG 59.910 42.308 0.00 0.00 0.00 3.86
3241 3702 6.369065 GGACGCACTATATTTTAGAATGGAGG 59.631 42.308 0.00 0.00 0.00 4.30
3242 3703 6.231211 ACGCACTATATTTTAGAATGGAGGG 58.769 40.000 0.00 0.00 0.00 4.30
3266 3727 5.431765 AGTATGAAACACCCTGCTCTTATG 58.568 41.667 0.00 0.00 0.00 1.90
3281 3742 3.947834 CTCTTATGGTACTTGGGCCTTTG 59.052 47.826 4.53 0.00 0.00 2.77
3331 4431 3.956848 GGAGAGGATTGAAGGGGAATTTG 59.043 47.826 0.00 0.00 0.00 2.32
3373 4473 1.686115 CCACAATCCCTGTCAATCCCC 60.686 57.143 0.00 0.00 35.47 4.81
3374 4474 1.285962 CACAATCCCTGTCAATCCCCT 59.714 52.381 0.00 0.00 35.47 4.79
3375 4475 1.566231 ACAATCCCTGTCAATCCCCTC 59.434 52.381 0.00 0.00 29.87 4.30
3385 4485 2.783510 GTCAATCCCCTCTAAATCCCCA 59.216 50.000 0.00 0.00 0.00 4.96
3395 4495 6.412024 CCCCTCTAAATCCCCATGAAAACTAT 60.412 42.308 0.00 0.00 0.00 2.12
3486 4598 3.649986 GCACACACCAGCCGACAC 61.650 66.667 0.00 0.00 0.00 3.67
3513 4625 2.423803 CCAATGATGGGATGCAGAAGGA 60.424 50.000 0.00 0.00 43.51 3.36
3518 4630 0.841961 TGGGATGCAGAAGGAGGATG 59.158 55.000 0.00 0.00 0.00 3.51
3523 4635 2.519771 TGCAGAAGGAGGATGCAAAT 57.480 45.000 0.00 0.00 46.31 2.32
3525 4637 2.025605 TGCAGAAGGAGGATGCAAATCT 60.026 45.455 0.00 0.00 46.31 2.40
3576 4688 1.153958 GAAAAGCATGCACCGCCTC 60.154 57.895 21.98 3.56 0.00 4.70
3579 4691 4.790962 AGCATGCACCGCCTCCAG 62.791 66.667 21.98 0.00 0.00 3.86
3590 4702 0.745845 CGCCTCCAGACCTGAAATGG 60.746 60.000 0.00 0.00 35.30 3.16
3591 4703 0.394899 GCCTCCAGACCTGAAATGGG 60.395 60.000 0.00 0.00 34.71 4.00
3596 4708 1.203050 CCAGACCTGAAATGGGTTGGT 60.203 52.381 0.00 0.00 37.17 3.67
3597 4709 2.597455 CAGACCTGAAATGGGTTGGTT 58.403 47.619 0.00 0.00 37.17 3.67
3613 4725 2.451490 TGGTTTTGGTGCTGTTTCAGA 58.549 42.857 0.66 0.00 32.44 3.27
3614 4726 2.426738 TGGTTTTGGTGCTGTTTCAGAG 59.573 45.455 0.66 0.00 32.44 3.35
3615 4727 2.427095 GGTTTTGGTGCTGTTTCAGAGT 59.573 45.455 0.66 0.00 32.44 3.24
3616 4728 3.119137 GGTTTTGGTGCTGTTTCAGAGTT 60.119 43.478 0.66 0.00 32.44 3.01
3617 4729 4.494484 GTTTTGGTGCTGTTTCAGAGTTT 58.506 39.130 0.66 0.00 32.44 2.66
3618 4730 3.781079 TTGGTGCTGTTTCAGAGTTTG 57.219 42.857 0.66 0.00 32.44 2.93
3619 4731 2.997980 TGGTGCTGTTTCAGAGTTTGA 58.002 42.857 0.66 0.00 32.44 2.69
3620 4732 3.351740 TGGTGCTGTTTCAGAGTTTGAA 58.648 40.909 0.66 0.00 43.92 2.69
3634 4746 8.861033 TCAGAGTTTGAAAAGAAAACATGATG 57.139 30.769 0.00 0.00 39.49 3.07
3635 4747 8.685427 TCAGAGTTTGAAAAGAAAACATGATGA 58.315 29.630 0.00 0.00 39.49 2.92
3636 4748 9.472361 CAGAGTTTGAAAAGAAAACATGATGAT 57.528 29.630 0.00 0.00 39.49 2.45
3639 4751 9.820725 AGTTTGAAAAGAAAACATGATGATTCA 57.179 25.926 0.00 0.00 39.49 2.57
3641 4753 7.878477 TGAAAAGAAAACATGATGATTCAGC 57.122 32.000 0.00 0.00 34.73 4.26
3642 4754 7.435305 TGAAAAGAAAACATGATGATTCAGCA 58.565 30.769 7.12 7.12 34.73 4.41
3643 4755 7.927092 TGAAAAGAAAACATGATGATTCAGCAA 59.073 29.630 8.90 0.00 32.21 3.91
3644 4756 7.647907 AAAGAAAACATGATGATTCAGCAAC 57.352 32.000 8.90 0.00 32.21 4.17
3645 4757 6.585695 AGAAAACATGATGATTCAGCAACT 57.414 33.333 8.90 0.00 32.21 3.16
3646 4758 6.989659 AGAAAACATGATGATTCAGCAACTT 58.010 32.000 8.90 0.50 32.21 2.66
3647 4759 7.439381 AGAAAACATGATGATTCAGCAACTTT 58.561 30.769 8.90 8.47 32.21 2.66
3648 4760 7.929785 AGAAAACATGATGATTCAGCAACTTTT 59.070 29.630 8.90 13.80 32.21 2.27
3649 4761 9.195411 GAAAACATGATGATTCAGCAACTTTTA 57.805 29.630 8.90 0.00 32.21 1.52
3650 4762 9.545105 AAAACATGATGATTCAGCAACTTTTAA 57.455 25.926 8.90 0.00 32.21 1.52
3651 4763 9.715121 AAACATGATGATTCAGCAACTTTTAAT 57.285 25.926 8.90 0.00 32.21 1.40
3652 4764 8.922058 ACATGATGATTCAGCAACTTTTAATC 57.078 30.769 8.90 0.00 32.21 1.75
3653 4765 8.525316 ACATGATGATTCAGCAACTTTTAATCA 58.475 29.630 8.90 0.00 39.95 2.57
3654 4766 9.361315 CATGATGATTCAGCAACTTTTAATCAA 57.639 29.630 8.90 0.00 39.31 2.57
3662 4774 9.748708 TTCAGCAACTTTTAATCAATATATGGC 57.251 29.630 0.00 0.00 0.00 4.40
3663 4775 8.911965 TCAGCAACTTTTAATCAATATATGGCA 58.088 29.630 0.00 0.00 0.00 4.92
3664 4776 9.701098 CAGCAACTTTTAATCAATATATGGCAT 57.299 29.630 4.88 4.88 0.00 4.40
3668 4780 9.840427 AACTTTTAATCAATATATGGCATACGC 57.160 29.630 9.83 0.00 37.44 4.42
3669 4781 9.231297 ACTTTTAATCAATATATGGCATACGCT 57.769 29.630 9.83 0.00 38.60 5.07
3672 4784 9.660180 TTTAATCAATATATGGCATACGCTACA 57.340 29.630 9.83 0.00 38.60 2.74
3673 4785 7.539712 AATCAATATATGGCATACGCTACAC 57.460 36.000 9.83 0.00 38.60 2.90
3674 4786 6.031751 TCAATATATGGCATACGCTACACA 57.968 37.500 9.83 0.00 38.60 3.72
3675 4787 6.099341 TCAATATATGGCATACGCTACACAG 58.901 40.000 9.83 0.00 38.60 3.66
3676 4788 2.148916 TATGGCATACGCTACACAGC 57.851 50.000 2.32 0.00 44.90 4.40
3677 4789 0.465705 ATGGCATACGCTACACAGCT 59.534 50.000 0.00 0.00 46.26 4.24
3678 4790 1.107945 TGGCATACGCTACACAGCTA 58.892 50.000 0.00 0.00 46.26 3.32
3679 4791 1.478916 TGGCATACGCTACACAGCTAA 59.521 47.619 0.00 0.00 46.26 3.09
3680 4792 2.128035 GGCATACGCTACACAGCTAAG 58.872 52.381 0.00 0.00 46.26 2.18
3681 4793 1.523095 GCATACGCTACACAGCTAAGC 59.477 52.381 0.00 0.00 46.26 3.09
3682 4794 2.799917 GCATACGCTACACAGCTAAGCT 60.800 50.000 7.63 0.00 46.26 3.74
3683 4795 2.846039 TACGCTACACAGCTAAGCTC 57.154 50.000 7.63 0.00 46.26 4.09
3684 4796 1.178276 ACGCTACACAGCTAAGCTCT 58.822 50.000 7.63 0.00 46.26 4.09
3685 4797 1.546476 ACGCTACACAGCTAAGCTCTT 59.454 47.619 7.63 0.00 46.26 2.85
3686 4798 1.923204 CGCTACACAGCTAAGCTCTTG 59.077 52.381 7.63 0.00 46.26 3.02
3687 4799 1.663135 GCTACACAGCTAAGCTCTTGC 59.337 52.381 0.00 0.00 44.93 4.01
3688 4800 2.932622 GCTACACAGCTAAGCTCTTGCA 60.933 50.000 8.00 0.00 44.93 4.08
3689 4801 2.260844 ACACAGCTAAGCTCTTGCAA 57.739 45.000 0.00 0.00 42.74 4.08
3690 4802 2.787994 ACACAGCTAAGCTCTTGCAAT 58.212 42.857 0.00 0.00 42.74 3.56
3691 4803 3.942829 ACACAGCTAAGCTCTTGCAATA 58.057 40.909 0.00 0.00 42.74 1.90
3692 4804 3.937706 ACACAGCTAAGCTCTTGCAATAG 59.062 43.478 7.45 7.45 42.74 1.73
3693 4805 3.311871 CACAGCTAAGCTCTTGCAATAGG 59.688 47.826 13.15 2.10 42.74 2.57
3694 4806 3.198635 ACAGCTAAGCTCTTGCAATAGGA 59.801 43.478 13.15 0.57 42.74 2.94
3695 4807 4.194640 CAGCTAAGCTCTTGCAATAGGAA 58.805 43.478 13.15 0.00 42.74 3.36
3696 4808 4.637534 CAGCTAAGCTCTTGCAATAGGAAA 59.362 41.667 13.15 0.00 42.74 3.13
3697 4809 5.298777 CAGCTAAGCTCTTGCAATAGGAAAT 59.701 40.000 13.15 0.00 42.74 2.17
3698 4810 5.890419 AGCTAAGCTCTTGCAATAGGAAATT 59.110 36.000 13.15 2.45 42.74 1.82
3699 4811 6.039159 AGCTAAGCTCTTGCAATAGGAAATTC 59.961 38.462 13.15 0.00 42.74 2.17
3700 4812 5.588958 AAGCTCTTGCAATAGGAAATTCC 57.411 39.130 13.15 3.29 42.74 3.01
3701 4813 4.603131 AGCTCTTGCAATAGGAAATTCCA 58.397 39.130 15.21 0.69 39.55 3.53
3702 4814 4.643784 AGCTCTTGCAATAGGAAATTCCAG 59.356 41.667 15.21 0.88 39.55 3.86
3703 4815 4.735873 GCTCTTGCAATAGGAAATTCCAGC 60.736 45.833 15.21 12.36 37.89 4.85
3704 4816 3.378112 TCTTGCAATAGGAAATTCCAGCG 59.622 43.478 15.21 0.82 39.61 5.18
3705 4817 2.997980 TGCAATAGGAAATTCCAGCGA 58.002 42.857 15.21 0.00 39.61 4.93
3706 4818 3.351740 TGCAATAGGAAATTCCAGCGAA 58.648 40.909 15.21 0.00 39.61 4.70
3707 4819 3.378112 TGCAATAGGAAATTCCAGCGAAG 59.622 43.478 15.21 0.25 39.61 3.79
3708 4820 3.793465 GCAATAGGAAATTCCAGCGAAGC 60.793 47.826 15.21 6.62 45.60 3.86
3721 4833 3.773117 CGAAGCGCCAGAAATTTGT 57.227 47.368 2.29 0.00 0.00 2.83
3722 4834 2.050477 CGAAGCGCCAGAAATTTGTT 57.950 45.000 2.29 0.00 0.00 2.83
3723 4835 3.196007 CGAAGCGCCAGAAATTTGTTA 57.804 42.857 2.29 0.00 0.00 2.41
3724 4836 2.908626 CGAAGCGCCAGAAATTTGTTAC 59.091 45.455 2.29 0.00 0.00 2.50
3725 4837 3.242518 GAAGCGCCAGAAATTTGTTACC 58.757 45.455 2.29 0.00 0.00 2.85
3726 4838 1.544246 AGCGCCAGAAATTTGTTACCC 59.456 47.619 2.29 0.00 0.00 3.69
3727 4839 1.544246 GCGCCAGAAATTTGTTACCCT 59.456 47.619 0.00 0.00 0.00 4.34
3728 4840 2.029380 GCGCCAGAAATTTGTTACCCTT 60.029 45.455 0.00 0.00 0.00 3.95
3729 4841 3.554129 GCGCCAGAAATTTGTTACCCTTT 60.554 43.478 0.00 0.00 0.00 3.11
3730 4842 3.987220 CGCCAGAAATTTGTTACCCTTTG 59.013 43.478 0.00 0.00 0.00 2.77
3731 4843 4.261825 CGCCAGAAATTTGTTACCCTTTGA 60.262 41.667 0.00 0.00 0.00 2.69
3732 4844 5.566627 CGCCAGAAATTTGTTACCCTTTGAT 60.567 40.000 0.00 0.00 0.00 2.57
3733 4845 6.349777 CGCCAGAAATTTGTTACCCTTTGATA 60.350 38.462 0.00 0.00 0.00 2.15
3734 4846 7.382898 GCCAGAAATTTGTTACCCTTTGATAA 58.617 34.615 0.00 0.00 0.00 1.75
3735 4847 7.545615 GCCAGAAATTTGTTACCCTTTGATAAG 59.454 37.037 0.00 0.00 0.00 1.73
3736 4848 8.802267 CCAGAAATTTGTTACCCTTTGATAAGA 58.198 33.333 0.00 0.00 32.92 2.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.833131 GCCCATCCTATTGTCCAGATTTAAA 59.167 40.000 0.00 0.00 0.00 1.52
35 37 3.008485 GGTCTTCCTAGCCCATCCTATTG 59.992 52.174 0.00 0.00 0.00 1.90
37 39 2.456733 AGGTCTTCCTAGCCCATCCTAT 59.543 50.000 0.00 0.00 43.12 2.57
38 40 1.866943 AGGTCTTCCTAGCCCATCCTA 59.133 52.381 0.00 0.00 43.12 2.94
39 41 0.644937 AGGTCTTCCTAGCCCATCCT 59.355 55.000 0.00 0.00 43.12 3.24
42 44 3.049344 CCTTTAGGTCTTCCTAGCCCAT 58.951 50.000 0.00 0.00 45.71 4.00
46 48 5.678955 TTTCTCCTTTAGGTCTTCCTAGC 57.321 43.478 0.00 0.00 45.71 3.42
48 50 7.569599 ATGTTTTCTCCTTTAGGTCTTCCTA 57.430 36.000 0.00 0.00 44.58 2.94
79 81 5.874810 GTCAGTCAAAGCATATGTCCTTACA 59.125 40.000 4.29 0.00 40.69 2.41
95 97 1.811558 GCTTGGCTCACTGTCAGTCAA 60.812 52.381 1.37 0.00 34.33 3.18
96 98 0.250038 GCTTGGCTCACTGTCAGTCA 60.250 55.000 1.37 0.00 0.00 3.41
97 99 1.287730 CGCTTGGCTCACTGTCAGTC 61.288 60.000 1.37 0.00 0.00 3.51
99 101 2.031516 CCGCTTGGCTCACTGTCAG 61.032 63.158 0.00 0.00 0.00 3.51
103 105 0.737715 GTAGTCCGCTTGGCTCACTG 60.738 60.000 0.00 0.00 0.00 3.66
114 116 1.819903 AGAAGAGTTCAGGTAGTCCGC 59.180 52.381 0.00 0.00 39.05 5.54
115 117 5.640189 TTTAGAAGAGTTCAGGTAGTCCG 57.360 43.478 0.00 0.00 39.05 4.79
121 123 3.262151 GGGAGCTTTAGAAGAGTTCAGGT 59.738 47.826 0.00 0.00 0.00 4.00
124 126 3.646162 TGTGGGAGCTTTAGAAGAGTTCA 59.354 43.478 0.00 0.00 0.00 3.18
127 129 6.567602 AATATGTGGGAGCTTTAGAAGAGT 57.432 37.500 0.00 0.00 0.00 3.24
129 131 9.747898 TTTAAAATATGTGGGAGCTTTAGAAGA 57.252 29.630 0.00 0.00 0.00 2.87
148 150 6.783708 TGTGGTCCAGACACTTTTTAAAAT 57.216 33.333 0.55 0.00 39.52 1.82
152 154 4.141287 CCATGTGGTCCAGACACTTTTTA 58.859 43.478 0.00 0.00 39.52 1.52
158 228 1.073025 TGCCATGTGGTCCAGACAC 59.927 57.895 0.00 0.00 39.26 3.67
163 233 3.245346 TCCGTGCCATGTGGTCCA 61.245 61.111 0.35 0.00 37.57 4.02
175 245 2.819595 CGCCCCTGAATGTCCGTG 60.820 66.667 0.00 0.00 0.00 4.94
176 246 2.406002 AAACGCCCCTGAATGTCCGT 62.406 55.000 0.00 0.00 0.00 4.69
188 258 4.083003 TCAACACAATCTATCAAAACGCCC 60.083 41.667 0.00 0.00 0.00 6.13
189 259 5.041951 TCAACACAATCTATCAAAACGCC 57.958 39.130 0.00 0.00 0.00 5.68
192 262 7.274250 GGCATCTTCAACACAATCTATCAAAAC 59.726 37.037 0.00 0.00 0.00 2.43
200 270 3.446442 AGGGCATCTTCAACACAATCT 57.554 42.857 0.00 0.00 0.00 2.40
203 273 4.469657 AGTTAAGGGCATCTTCAACACAA 58.530 39.130 0.00 0.00 36.93 3.33
211 281 8.037758 CGATGATTAGATAGTTAAGGGCATCTT 58.962 37.037 0.00 0.00 39.40 2.40
223 293 9.915629 GGAAAGTTCATACGATGATTAGATAGT 57.084 33.333 0.00 0.00 39.39 2.12
230 302 6.356556 TCATGGGAAAGTTCATACGATGATT 58.643 36.000 0.00 0.00 39.39 2.57
237 309 6.436843 ACGAATTCATGGGAAAGTTCATAC 57.563 37.500 6.22 0.00 36.43 2.39
240 312 4.083537 CGAACGAATTCATGGGAAAGTTCA 60.084 41.667 6.22 0.00 41.15 3.18
241 313 4.083484 ACGAACGAATTCATGGGAAAGTTC 60.083 41.667 6.22 7.27 39.65 3.01
242 314 3.818773 ACGAACGAATTCATGGGAAAGTT 59.181 39.130 6.22 0.00 36.43 2.66
247 319 2.167693 AGCTACGAACGAATTCATGGGA 59.832 45.455 6.22 0.00 34.14 4.37
252 324 5.921976 TGAAAGTTAGCTACGAACGAATTCA 59.078 36.000 6.22 3.28 34.14 2.57
253 325 6.385537 TGAAAGTTAGCTACGAACGAATTC 57.614 37.500 0.00 0.00 31.85 2.17
254 326 6.963049 ATGAAAGTTAGCTACGAACGAATT 57.037 33.333 0.00 0.00 31.85 2.17
255 327 8.540492 CATTATGAAAGTTAGCTACGAACGAAT 58.460 33.333 0.00 0.00 31.85 3.34
256 328 7.463648 GCATTATGAAAGTTAGCTACGAACGAA 60.464 37.037 0.00 0.00 31.85 3.85
257 329 6.020121 GCATTATGAAAGTTAGCTACGAACGA 60.020 38.462 0.00 0.00 31.85 3.85
258 330 6.019801 AGCATTATGAAAGTTAGCTACGAACG 60.020 38.462 0.00 0.00 31.85 3.95
259 331 7.235430 AGCATTATGAAAGTTAGCTACGAAC 57.765 36.000 0.00 0.00 0.00 3.95
262 334 8.276325 CCTTAAGCATTATGAAAGTTAGCTACG 58.724 37.037 0.00 0.00 0.00 3.51
271 343 6.212888 ACAAGGCCTTAAGCATTATGAAAG 57.787 37.500 20.00 2.68 45.44 2.62
277 349 3.013921 CCGAACAAGGCCTTAAGCATTA 58.986 45.455 20.00 0.00 45.44 1.90
281 353 1.671328 GATCCGAACAAGGCCTTAAGC 59.329 52.381 20.00 9.09 42.60 3.09
282 354 2.289565 GGATCCGAACAAGGCCTTAAG 58.710 52.381 20.00 9.74 0.00 1.85
285 357 0.404040 TTGGATCCGAACAAGGCCTT 59.596 50.000 13.78 13.78 0.00 4.35
290 362 5.847304 TCTCTATGATTGGATCCGAACAAG 58.153 41.667 15.41 13.23 0.00 3.16
310 391 1.527696 CGTGCACATGCGAATTTCTC 58.472 50.000 18.64 0.00 45.83 2.87
328 409 3.449227 TAGGACTGGACAGGCGCG 61.449 66.667 0.00 0.00 37.31 6.86
331 412 1.215647 CGTGTAGGACTGGACAGGC 59.784 63.158 4.14 0.00 35.10 4.85
335 416 0.810016 GAGGTCGTGTAGGACTGGAC 59.190 60.000 4.91 0.00 37.12 4.02
336 417 0.402887 TGAGGTCGTGTAGGACTGGA 59.597 55.000 4.91 0.00 37.12 3.86
338 419 2.092323 TCATGAGGTCGTGTAGGACTG 58.908 52.381 0.00 0.00 37.12 3.51
341 422 4.533815 AGTAATCATGAGGTCGTGTAGGA 58.466 43.478 0.09 0.00 34.59 2.94
372 453 1.334599 GCGAAATCCAACGACTTTGCA 60.335 47.619 0.00 0.00 33.34 4.08
374 455 2.286713 TGTGCGAAATCCAACGACTTTG 60.287 45.455 0.00 0.00 34.63 2.77
380 461 2.215363 GTGTTTTGTGCGAAATCCAACG 59.785 45.455 0.00 0.00 0.00 4.10
391 472 5.343860 ACTTAAAACTTGACGTGTTTTGTGC 59.656 36.000 19.71 0.00 44.27 4.57
426 508 6.275335 ACAAATGACAGAATCACCAAGTTTG 58.725 36.000 0.00 0.00 41.24 2.93
524 687 9.238368 ACAGATCTGGGAAACGATTTATTTTTA 57.762 29.630 26.08 0.00 34.19 1.52
525 688 8.122472 ACAGATCTGGGAAACGATTTATTTTT 57.878 30.769 26.08 0.00 34.19 1.94
526 689 7.703058 ACAGATCTGGGAAACGATTTATTTT 57.297 32.000 26.08 0.00 34.19 1.82
535 698 9.855021 ATTTTTAATTTACAGATCTGGGAAACG 57.145 29.630 26.08 0.00 34.19 3.60
580 820 5.390387 AGGCTAAAATCCAACAACCACTAA 58.610 37.500 0.00 0.00 0.00 2.24
581 821 4.993028 AGGCTAAAATCCAACAACCACTA 58.007 39.130 0.00 0.00 0.00 2.74
582 822 3.844640 AGGCTAAAATCCAACAACCACT 58.155 40.909 0.00 0.00 0.00 4.00
605 845 7.787028 AGTTAAACTCCAACATTGCCTAAAAA 58.213 30.769 0.00 0.00 0.00 1.94
606 846 7.354751 AGTTAAACTCCAACATTGCCTAAAA 57.645 32.000 0.00 0.00 0.00 1.52
607 847 6.969993 AGTTAAACTCCAACATTGCCTAAA 57.030 33.333 0.00 0.00 0.00 1.85
608 848 6.969993 AAGTTAAACTCCAACATTGCCTAA 57.030 33.333 0.00 0.00 0.00 2.69
609 849 6.969993 AAAGTTAAACTCCAACATTGCCTA 57.030 33.333 0.00 0.00 0.00 3.93
610 850 5.869649 AAAGTTAAACTCCAACATTGCCT 57.130 34.783 0.00 0.00 0.00 4.75
611 851 6.918892 AAAAAGTTAAACTCCAACATTGCC 57.081 33.333 0.00 0.00 0.00 4.52
634 874 4.878971 TGAACTCCAACATCGACTCAAAAA 59.121 37.500 0.00 0.00 0.00 1.94
635 875 4.447290 TGAACTCCAACATCGACTCAAAA 58.553 39.130 0.00 0.00 0.00 2.44
636 876 4.066646 TGAACTCCAACATCGACTCAAA 57.933 40.909 0.00 0.00 0.00 2.69
637 877 3.744238 TGAACTCCAACATCGACTCAA 57.256 42.857 0.00 0.00 0.00 3.02
638 878 3.744238 TTGAACTCCAACATCGACTCA 57.256 42.857 0.00 0.00 0.00 3.41
674 914 9.196552 ACGTAAACTAGTATAAACTCCAACAAC 57.803 33.333 0.00 0.00 37.15 3.32
683 924 8.947940 CGGACACATACGTAAACTAGTATAAAC 58.052 37.037 0.00 0.00 32.81 2.01
688 929 6.925610 ATCGGACACATACGTAAACTAGTA 57.074 37.500 0.00 0.00 32.21 1.82
806 1051 1.527311 GGCCTATTTCGATCGAACAGC 59.473 52.381 29.15 25.15 33.41 4.40
807 1052 3.099267 AGGCCTATTTCGATCGAACAG 57.901 47.619 29.15 25.41 33.41 3.16
808 1053 3.118920 TGAAGGCCTATTTCGATCGAACA 60.119 43.478 29.15 19.77 33.41 3.18
809 1054 3.454375 TGAAGGCCTATTTCGATCGAAC 58.546 45.455 29.15 17.12 33.41 3.95
810 1055 3.812156 TGAAGGCCTATTTCGATCGAA 57.188 42.857 25.96 25.96 0.00 3.71
811 1056 3.454375 GTTGAAGGCCTATTTCGATCGA 58.546 45.455 15.15 15.15 0.00 3.59
812 1057 2.544267 GGTTGAAGGCCTATTTCGATCG 59.456 50.000 5.16 9.36 0.00 3.69
813 1058 2.879026 GGGTTGAAGGCCTATTTCGATC 59.121 50.000 5.16 0.00 0.00 3.69
814 1059 2.509964 AGGGTTGAAGGCCTATTTCGAT 59.490 45.455 5.16 0.00 0.00 3.59
815 1060 1.913419 AGGGTTGAAGGCCTATTTCGA 59.087 47.619 5.16 0.00 0.00 3.71
816 1061 2.289565 GAGGGTTGAAGGCCTATTTCG 58.710 52.381 5.16 0.00 0.00 3.46
817 1062 2.242452 AGGAGGGTTGAAGGCCTATTTC 59.758 50.000 5.16 0.00 0.00 2.17
851 1109 5.672194 AGGAAGGGAGGATGCTCTATTTTTA 59.328 40.000 14.40 0.00 0.00 1.52
855 1113 3.247162 GAGGAAGGGAGGATGCTCTATT 58.753 50.000 14.40 8.96 31.98 1.73
857 1115 1.133009 GGAGGAAGGGAGGATGCTCTA 60.133 57.143 14.40 0.00 34.76 2.43
1064 1328 2.225715 AGGGTCTAGGCCTAGGTCTA 57.774 55.000 34.43 21.85 34.06 2.59
1065 1329 2.177451 GTTAGGGTCTAGGCCTAGGTCT 59.823 54.545 34.43 28.16 34.06 3.85
1066 1330 2.596346 GTTAGGGTCTAGGCCTAGGTC 58.404 57.143 34.43 26.51 34.06 3.85
1067 1331 1.219980 GGTTAGGGTCTAGGCCTAGGT 59.780 57.143 34.43 20.71 34.06 3.08
1068 1332 1.482741 GGGTTAGGGTCTAGGCCTAGG 60.483 61.905 34.43 18.90 34.06 3.02
1069 1333 1.504221 AGGGTTAGGGTCTAGGCCTAG 59.496 57.143 30.94 30.94 34.56 3.02
1070 1334 1.629075 AGGGTTAGGGTCTAGGCCTA 58.371 55.000 14.34 13.09 0.00 3.93
1071 1335 1.219980 GTAGGGTTAGGGTCTAGGCCT 59.780 57.143 14.34 11.78 0.00 5.19
1072 1336 1.062658 TGTAGGGTTAGGGTCTAGGCC 60.063 57.143 4.21 4.21 0.00 5.19
1073 1337 2.037901 GTGTAGGGTTAGGGTCTAGGC 58.962 57.143 0.00 0.00 0.00 3.93
1074 1338 2.675583 GGTGTAGGGTTAGGGTCTAGG 58.324 57.143 0.00 0.00 0.00 3.02
1075 1339 2.305009 CGGTGTAGGGTTAGGGTCTAG 58.695 57.143 0.00 0.00 0.00 2.43
1114 1390 1.792118 TACCAGGATCCGCGATGTCG 61.792 60.000 8.23 0.00 43.27 4.35
1115 1391 0.039074 CTACCAGGATCCGCGATGTC 60.039 60.000 8.23 1.72 0.00 3.06
1221 1500 2.619177 AGATCATCCGTACGTCTTCTGG 59.381 50.000 15.21 0.00 0.00 3.86
1229 1508 2.016704 GCGCCAGATCATCCGTACG 61.017 63.158 8.69 8.69 0.00 3.67
1230 1509 0.664767 GAGCGCCAGATCATCCGTAC 60.665 60.000 2.29 0.00 32.08 3.67
1231 1510 1.660355 GAGCGCCAGATCATCCGTA 59.340 57.895 2.29 0.00 32.08 4.02
1311 1590 2.058798 TGAGAATAATCGGCGCGAATC 58.941 47.619 12.10 0.00 39.99 2.52
1384 1663 9.999009 GCACCATAACTCCTAAATTTACTTTAC 57.001 33.333 0.00 0.00 0.00 2.01
1403 1683 4.721776 ACCTAAGAATTCAGGAGCACCATA 59.278 41.667 16.66 0.00 38.94 2.74
1418 1698 5.425217 TGCAGGACATATCTGAACCTAAGAA 59.575 40.000 0.00 0.00 33.78 2.52
1420 1700 5.282055 TGCAGGACATATCTGAACCTAAG 57.718 43.478 0.00 0.00 33.78 2.18
1437 1717 2.505819 AGTCCCAATACTAACCTGCAGG 59.494 50.000 31.60 31.60 42.17 4.85
1463 1743 6.112734 ACGGATCTACAATTTGTAATGCTGA 58.887 36.000 10.32 4.68 31.67 4.26
1482 1762 4.295141 TCCATTGTGTTCCTAAACGGAT 57.705 40.909 0.00 0.00 42.70 4.18
1497 1777 4.074259 TGAGTTGACAGGTTCATCCATTG 58.926 43.478 0.00 0.00 39.02 2.82
1526 1822 7.531280 TGAAGCTATGAGAAGAAGAAAATCG 57.469 36.000 0.00 0.00 0.00 3.34
1567 1863 3.075882 ACAATGGATCTGGGACCTTTTGA 59.924 43.478 0.00 0.00 0.00 2.69
1574 1870 4.446371 CAGTTCTACAATGGATCTGGGAC 58.554 47.826 0.00 0.00 30.96 4.46
1601 1897 0.610174 TACTGGCAGAAGCTGGACTG 59.390 55.000 23.66 10.26 41.70 3.51
1606 1902 2.740981 CAAACTCTACTGGCAGAAGCTG 59.259 50.000 23.66 11.73 41.70 4.24
1615 1912 4.911390 AGGAATTGGACAAACTCTACTGG 58.089 43.478 0.00 0.00 0.00 4.00
1673 1970 6.627087 AGATTCCAGATGGTTCAGTTTAGA 57.373 37.500 0.00 0.00 36.34 2.10
1674 1971 8.428063 AGATAGATTCCAGATGGTTCAGTTTAG 58.572 37.037 0.00 0.00 36.34 1.85
1675 1972 8.206867 CAGATAGATTCCAGATGGTTCAGTTTA 58.793 37.037 0.00 0.00 36.34 2.01
1676 1973 7.052873 CAGATAGATTCCAGATGGTTCAGTTT 58.947 38.462 0.00 0.00 36.34 2.66
1677 1974 6.409005 CCAGATAGATTCCAGATGGTTCAGTT 60.409 42.308 0.00 0.00 36.34 3.16
1678 1975 5.071519 CCAGATAGATTCCAGATGGTTCAGT 59.928 44.000 0.00 0.00 36.34 3.41
1679 1976 5.071519 ACCAGATAGATTCCAGATGGTTCAG 59.928 44.000 0.00 0.00 36.16 3.02
1800 2097 5.348164 CAGAAAACCAAAGACCACGATTTT 58.652 37.500 0.00 0.00 0.00 1.82
1990 2288 4.183865 TCTGGATGTAAATCACTTGAGCG 58.816 43.478 0.00 0.00 0.00 5.03
1994 2292 7.274904 CAGCAAATTCTGGATGTAAATCACTTG 59.725 37.037 0.00 0.00 0.00 3.16
2007 2305 7.289310 TCATATAACCATCAGCAAATTCTGGA 58.711 34.615 0.00 0.00 34.91 3.86
2106 2405 8.090788 AGGTTATGTCATACAAAGTCCTATGT 57.909 34.615 0.00 0.00 0.00 2.29
2178 2477 6.978080 GGCAAGTGTTTTTGTATGAAAGAAGA 59.022 34.615 0.00 0.00 0.00 2.87
2259 2558 2.760634 TAAGCTTCCAAGATGCGACA 57.239 45.000 0.00 0.00 37.70 4.35
2263 2562 3.375299 ACGAACATAAGCTTCCAAGATGC 59.625 43.478 0.00 0.00 33.70 3.91
2264 2563 4.201851 CCACGAACATAAGCTTCCAAGATG 60.202 45.833 0.00 3.08 0.00 2.90
2284 2583 4.782019 TTTCCTGCACATAAATGACCAC 57.218 40.909 0.00 0.00 0.00 4.16
2324 2623 7.544566 CCAACTATTAAACGTGTACTCTGATGT 59.455 37.037 0.00 0.00 0.00 3.06
2334 2633 4.716794 TGGGTTCCAACTATTAAACGTGT 58.283 39.130 0.00 0.00 0.00 4.49
2350 2649 7.093902 CCCTATTTTTCCTCTTAAGTTGGGTTC 60.094 40.741 14.16 0.00 0.00 3.62
2351 2650 6.724441 CCCTATTTTTCCTCTTAAGTTGGGTT 59.276 38.462 14.16 2.72 0.00 4.11
2379 2678 6.597280 TCAAATTCGACCATGTGATTATGTGA 59.403 34.615 0.00 0.00 0.00 3.58
2380 2679 6.784176 TCAAATTCGACCATGTGATTATGTG 58.216 36.000 0.00 0.00 0.00 3.21
2381 2680 7.336679 TCTTCAAATTCGACCATGTGATTATGT 59.663 33.333 0.00 0.00 0.00 2.29
2382 2681 7.696755 TCTTCAAATTCGACCATGTGATTATG 58.303 34.615 0.00 0.00 0.00 1.90
2383 2682 7.770433 TCTCTTCAAATTCGACCATGTGATTAT 59.230 33.333 0.00 0.00 0.00 1.28
2384 2683 7.102993 TCTCTTCAAATTCGACCATGTGATTA 58.897 34.615 0.00 0.00 0.00 1.75
2385 2684 5.939883 TCTCTTCAAATTCGACCATGTGATT 59.060 36.000 0.00 0.00 0.00 2.57
2386 2685 5.491070 TCTCTTCAAATTCGACCATGTGAT 58.509 37.500 0.00 0.00 0.00 3.06
2643 3104 4.223800 TGCTTCCGGTGATGCATC 57.776 55.556 20.14 20.14 44.13 3.91
2787 3248 1.162698 CCATATTCAGATGCGGCAGG 58.837 55.000 9.25 0.48 0.00 4.85
2788 3249 2.074576 CTCCATATTCAGATGCGGCAG 58.925 52.381 9.25 0.00 0.00 4.85
2789 3250 1.417517 ACTCCATATTCAGATGCGGCA 59.582 47.619 4.58 4.58 0.00 5.69
2790 3251 2.072298 GACTCCATATTCAGATGCGGC 58.928 52.381 0.00 0.00 0.00 6.53
2808 3269 5.405269 GTGGTTTGCATCAACTTTATTGGAC 59.595 40.000 1.52 0.00 0.00 4.02
2816 3277 3.706086 AGAAAGGTGGTTTGCATCAACTT 59.294 39.130 8.97 8.97 42.07 2.66
2835 3296 6.757897 ATCATTAATGTTGCGGAGAAAGAA 57.242 33.333 14.97 0.00 0.00 2.52
2895 3356 2.028130 ACAAATTTCTGGCAACCGTCA 58.972 42.857 0.00 0.00 0.00 4.35
2952 3413 3.589951 AGCATCTGCCCATATCAAAGT 57.410 42.857 0.00 0.00 43.38 2.66
2954 3415 3.402110 CGTAGCATCTGCCCATATCAAA 58.598 45.455 0.00 0.00 43.38 2.69
3006 3467 4.589908 ACATTGTGAAATGGAGGGAGTAC 58.410 43.478 3.70 0.00 34.56 2.73
3007 3468 4.927267 ACATTGTGAAATGGAGGGAGTA 57.073 40.909 3.70 0.00 34.56 2.59
3008 3469 3.814504 ACATTGTGAAATGGAGGGAGT 57.185 42.857 3.70 0.00 34.56 3.85
3009 3470 4.637534 CACTACATTGTGAAATGGAGGGAG 59.362 45.833 13.76 2.00 45.41 4.30
3010 3471 4.588899 CACTACATTGTGAAATGGAGGGA 58.411 43.478 13.76 0.00 45.41 4.20
3011 3472 3.129287 GCACTACATTGTGAAATGGAGGG 59.871 47.826 13.76 11.18 45.36 4.30
3012 3473 4.012374 AGCACTACATTGTGAAATGGAGG 58.988 43.478 13.76 5.57 43.78 4.30
3013 3474 5.392380 GGAAGCACTACATTGTGAAATGGAG 60.392 44.000 8.77 8.77 44.77 3.86
3014 3475 4.458989 GGAAGCACTACATTGTGAAATGGA 59.541 41.667 0.00 0.00 40.12 3.41
3015 3476 4.460382 AGGAAGCACTACATTGTGAAATGG 59.540 41.667 0.00 0.00 40.12 3.16
3016 3477 5.633830 AGGAAGCACTACATTGTGAAATG 57.366 39.130 0.00 0.00 40.12 2.32
3017 3478 6.655078 AAAGGAAGCACTACATTGTGAAAT 57.345 33.333 0.00 0.00 40.12 2.17
3018 3479 7.094377 GGATAAAGGAAGCACTACATTGTGAAA 60.094 37.037 0.00 0.00 40.12 2.69
3019 3480 6.374333 GGATAAAGGAAGCACTACATTGTGAA 59.626 38.462 0.00 0.00 40.12 3.18
3020 3481 5.880332 GGATAAAGGAAGCACTACATTGTGA 59.120 40.000 0.00 0.00 40.12 3.58
3021 3482 5.647658 TGGATAAAGGAAGCACTACATTGTG 59.352 40.000 0.00 0.00 40.62 3.33
3022 3483 5.648092 GTGGATAAAGGAAGCACTACATTGT 59.352 40.000 0.00 0.00 0.00 2.71
3023 3484 5.220662 CGTGGATAAAGGAAGCACTACATTG 60.221 44.000 0.00 0.00 0.00 2.82
3024 3485 4.876107 CGTGGATAAAGGAAGCACTACATT 59.124 41.667 0.00 0.00 0.00 2.71
3025 3486 4.081087 ACGTGGATAAAGGAAGCACTACAT 60.081 41.667 0.00 0.00 0.00 2.29
3026 3487 3.259876 ACGTGGATAAAGGAAGCACTACA 59.740 43.478 0.00 0.00 0.00 2.74
3027 3488 3.617263 CACGTGGATAAAGGAAGCACTAC 59.383 47.826 7.95 0.00 0.00 2.73
3028 3489 3.857052 CACGTGGATAAAGGAAGCACTA 58.143 45.455 7.95 0.00 0.00 2.74
3029 3490 2.699954 CACGTGGATAAAGGAAGCACT 58.300 47.619 7.95 0.00 0.00 4.40
3030 3491 1.130561 GCACGTGGATAAAGGAAGCAC 59.869 52.381 18.88 0.00 0.00 4.40
3031 3492 1.003118 AGCACGTGGATAAAGGAAGCA 59.997 47.619 18.88 0.00 0.00 3.91
3032 3493 1.739067 AGCACGTGGATAAAGGAAGC 58.261 50.000 18.88 0.00 0.00 3.86
3033 3494 3.334691 TGAAGCACGTGGATAAAGGAAG 58.665 45.455 18.88 0.00 0.00 3.46
3034 3495 3.410631 TGAAGCACGTGGATAAAGGAA 57.589 42.857 18.88 0.00 0.00 3.36
3035 3496 3.071479 GTTGAAGCACGTGGATAAAGGA 58.929 45.455 18.88 0.00 0.00 3.36
3036 3497 3.074412 AGTTGAAGCACGTGGATAAAGG 58.926 45.455 18.88 0.00 0.00 3.11
3037 3498 4.749245 AAGTTGAAGCACGTGGATAAAG 57.251 40.909 18.88 0.00 0.00 1.85
3038 3499 4.576873 TCAAAGTTGAAGCACGTGGATAAA 59.423 37.500 18.88 0.00 33.55 1.40
3039 3500 4.024387 GTCAAAGTTGAAGCACGTGGATAA 60.024 41.667 18.88 0.00 39.21 1.75
3040 3501 3.496884 GTCAAAGTTGAAGCACGTGGATA 59.503 43.478 18.88 0.00 39.21 2.59
3041 3502 2.290641 GTCAAAGTTGAAGCACGTGGAT 59.709 45.455 18.88 0.00 39.21 3.41
3042 3503 1.668751 GTCAAAGTTGAAGCACGTGGA 59.331 47.619 18.88 0.00 39.21 4.02
3043 3504 1.268539 GGTCAAAGTTGAAGCACGTGG 60.269 52.381 18.88 0.00 39.21 4.94
3044 3505 1.594518 CGGTCAAAGTTGAAGCACGTG 60.595 52.381 12.28 12.28 39.21 4.49
3045 3506 0.655733 CGGTCAAAGTTGAAGCACGT 59.344 50.000 0.00 0.00 39.21 4.49
3046 3507 0.655733 ACGGTCAAAGTTGAAGCACG 59.344 50.000 0.00 2.00 39.21 5.34
3047 3508 3.955771 TTACGGTCAAAGTTGAAGCAC 57.044 42.857 0.00 0.00 39.21 4.40
3048 3509 5.508200 AATTTACGGTCAAAGTTGAAGCA 57.492 34.783 0.00 0.00 39.21 3.91
3049 3510 7.646526 AGTTAAATTTACGGTCAAAGTTGAAGC 59.353 33.333 0.00 0.00 39.21 3.86
3051 3512 9.934190 GTAGTTAAATTTACGGTCAAAGTTGAA 57.066 29.630 0.00 0.00 39.21 2.69
3052 3513 8.558700 GGTAGTTAAATTTACGGTCAAAGTTGA 58.441 33.333 0.00 0.00 34.20 3.18
3053 3514 8.344098 TGGTAGTTAAATTTACGGTCAAAGTTG 58.656 33.333 0.00 0.00 29.44 3.16
3054 3515 8.449251 TGGTAGTTAAATTTACGGTCAAAGTT 57.551 30.769 0.00 0.00 31.36 2.66
3055 3516 8.449251 TTGGTAGTTAAATTTACGGTCAAAGT 57.551 30.769 0.00 0.00 0.00 2.66
3056 3517 8.776470 TCTTGGTAGTTAAATTTACGGTCAAAG 58.224 33.333 0.00 0.00 0.00 2.77
3057 3518 8.558700 GTCTTGGTAGTTAAATTTACGGTCAAA 58.441 33.333 0.00 0.00 0.00 2.69
3058 3519 7.173047 GGTCTTGGTAGTTAAATTTACGGTCAA 59.827 37.037 0.00 0.00 0.00 3.18
3059 3520 6.650390 GGTCTTGGTAGTTAAATTTACGGTCA 59.350 38.462 0.00 0.00 0.00 4.02
3060 3521 6.183360 CGGTCTTGGTAGTTAAATTTACGGTC 60.183 42.308 0.00 0.00 0.00 4.79
3061 3522 5.639082 CGGTCTTGGTAGTTAAATTTACGGT 59.361 40.000 0.00 0.00 0.00 4.83
3062 3523 5.868801 TCGGTCTTGGTAGTTAAATTTACGG 59.131 40.000 0.00 0.00 0.00 4.02
3063 3524 6.949578 TCGGTCTTGGTAGTTAAATTTACG 57.050 37.500 0.00 0.00 0.00 3.18
3064 3525 7.695201 GCAATCGGTCTTGGTAGTTAAATTTAC 59.305 37.037 0.00 0.00 0.00 2.01
3065 3526 7.413219 CGCAATCGGTCTTGGTAGTTAAATTTA 60.413 37.037 0.00 0.00 0.00 1.40
3066 3527 6.617879 GCAATCGGTCTTGGTAGTTAAATTT 58.382 36.000 0.00 0.00 0.00 1.82
3067 3528 5.163794 CGCAATCGGTCTTGGTAGTTAAATT 60.164 40.000 0.00 0.00 0.00 1.82
3068 3529 4.331717 CGCAATCGGTCTTGGTAGTTAAAT 59.668 41.667 0.00 0.00 0.00 1.40
3069 3530 3.680937 CGCAATCGGTCTTGGTAGTTAAA 59.319 43.478 0.00 0.00 0.00 1.52
3070 3531 3.255725 CGCAATCGGTCTTGGTAGTTAA 58.744 45.455 0.00 0.00 0.00 2.01
3071 3532 2.883574 CGCAATCGGTCTTGGTAGTTA 58.116 47.619 0.00 0.00 0.00 2.24
3072 3533 1.722011 CGCAATCGGTCTTGGTAGTT 58.278 50.000 0.00 0.00 0.00 2.24
3073 3534 3.436001 CGCAATCGGTCTTGGTAGT 57.564 52.632 0.00 0.00 0.00 2.73
3085 3546 2.485188 TTTTTGCTCCCGCCGCAATC 62.485 55.000 5.33 0.00 45.67 2.67
3086 3547 1.887344 ATTTTTGCTCCCGCCGCAAT 61.887 50.000 5.33 0.00 45.67 3.56
3087 3548 2.093537 AATTTTTGCTCCCGCCGCAA 62.094 50.000 0.00 0.00 44.83 4.85
3088 3549 1.244697 TAATTTTTGCTCCCGCCGCA 61.245 50.000 0.00 0.00 35.22 5.69
3089 3550 0.102300 ATAATTTTTGCTCCCGCCGC 59.898 50.000 0.00 0.00 34.43 6.53
3090 3551 3.252215 TGATATAATTTTTGCTCCCGCCG 59.748 43.478 0.00 0.00 34.43 6.46
3091 3552 4.846779 TGATATAATTTTTGCTCCCGCC 57.153 40.909 0.00 0.00 34.43 6.13
3092 3553 6.446318 TCATTGATATAATTTTTGCTCCCGC 58.554 36.000 0.00 0.00 0.00 6.13
3093 3554 9.480053 AATTCATTGATATAATTTTTGCTCCCG 57.520 29.630 0.00 0.00 0.00 5.14
3151 3612 1.739049 CAACTGCGGCAGGGAAAAA 59.261 52.632 31.38 0.00 35.51 1.94
3152 3613 2.199652 CCAACTGCGGCAGGGAAAA 61.200 57.895 31.38 0.00 35.51 2.29
3153 3614 2.597217 CCAACTGCGGCAGGGAAA 60.597 61.111 31.38 0.00 35.51 3.13
3154 3615 3.842925 GACCAACTGCGGCAGGGAA 62.843 63.158 31.38 0.00 35.51 3.97
3155 3616 4.329545 GACCAACTGCGGCAGGGA 62.330 66.667 31.38 0.00 35.51 4.20
3156 3617 4.335647 AGACCAACTGCGGCAGGG 62.336 66.667 31.38 25.15 35.51 4.45
3157 3618 2.743928 GAGACCAACTGCGGCAGG 60.744 66.667 31.38 18.77 35.51 4.85
3158 3619 3.114616 CGAGACCAACTGCGGCAG 61.115 66.667 27.43 27.43 37.52 4.85
3159 3620 3.454587 AACGAGACCAACTGCGGCA 62.455 57.895 1.29 1.29 0.00 5.69
3160 3621 2.665185 AACGAGACCAACTGCGGC 60.665 61.111 0.00 0.00 0.00 6.53
3161 3622 2.317609 CCAACGAGACCAACTGCGG 61.318 63.158 0.00 0.00 0.00 5.69
3162 3623 1.157870 AACCAACGAGACCAACTGCG 61.158 55.000 0.00 0.00 0.00 5.18
3163 3624 1.873698 TAACCAACGAGACCAACTGC 58.126 50.000 0.00 0.00 0.00 4.40
3164 3625 5.432885 AATTTAACCAACGAGACCAACTG 57.567 39.130 0.00 0.00 0.00 3.16
3165 3626 7.308951 CCATAAATTTAACCAACGAGACCAACT 60.309 37.037 1.21 0.00 0.00 3.16
3166 3627 6.804783 CCATAAATTTAACCAACGAGACCAAC 59.195 38.462 1.21 0.00 0.00 3.77
3167 3628 6.490721 ACCATAAATTTAACCAACGAGACCAA 59.509 34.615 1.21 0.00 0.00 3.67
3168 3629 6.005198 ACCATAAATTTAACCAACGAGACCA 58.995 36.000 1.21 0.00 0.00 4.02
3169 3630 6.149807 TGACCATAAATTTAACCAACGAGACC 59.850 38.462 1.21 0.00 0.00 3.85
3170 3631 7.136289 TGACCATAAATTTAACCAACGAGAC 57.864 36.000 1.21 0.00 0.00 3.36
3171 3632 7.747155 TTGACCATAAATTTAACCAACGAGA 57.253 32.000 1.21 0.00 0.00 4.04
3172 3633 8.079809 ACTTTGACCATAAATTTAACCAACGAG 58.920 33.333 1.21 3.35 0.00 4.18
3173 3634 7.942990 ACTTTGACCATAAATTTAACCAACGA 58.057 30.769 1.21 0.00 0.00 3.85
3174 3635 8.484008 CAACTTTGACCATAAATTTAACCAACG 58.516 33.333 1.21 5.06 0.00 4.10
3175 3636 8.769891 CCAACTTTGACCATAAATTTAACCAAC 58.230 33.333 1.21 0.00 0.00 3.77
3176 3637 8.705594 TCCAACTTTGACCATAAATTTAACCAA 58.294 29.630 1.21 2.19 0.00 3.67
3177 3638 8.145122 GTCCAACTTTGACCATAAATTTAACCA 58.855 33.333 1.21 0.00 0.00 3.67
3178 3639 7.601130 GGTCCAACTTTGACCATAAATTTAACC 59.399 37.037 1.21 0.00 38.76 2.85
3179 3640 8.364894 AGGTCCAACTTTGACCATAAATTTAAC 58.635 33.333 13.24 0.00 41.22 2.01
3180 3641 8.485578 AGGTCCAACTTTGACCATAAATTTAA 57.514 30.769 13.24 0.00 41.22 1.52
3181 3642 7.094549 CGAGGTCCAACTTTGACCATAAATTTA 60.095 37.037 13.24 0.00 41.22 1.40
3182 3643 6.294508 CGAGGTCCAACTTTGACCATAAATTT 60.295 38.462 13.24 0.00 41.22 1.82
3183 3644 5.183140 CGAGGTCCAACTTTGACCATAAATT 59.817 40.000 13.24 0.00 41.22 1.82
3184 3645 4.700213 CGAGGTCCAACTTTGACCATAAAT 59.300 41.667 13.24 0.00 41.22 1.40
3185 3646 4.069304 CGAGGTCCAACTTTGACCATAAA 58.931 43.478 13.24 0.00 41.22 1.40
3186 3647 3.325425 TCGAGGTCCAACTTTGACCATAA 59.675 43.478 13.24 0.00 41.22 1.90
3187 3648 2.901192 TCGAGGTCCAACTTTGACCATA 59.099 45.455 13.24 0.00 41.22 2.74
3188 3649 1.697432 TCGAGGTCCAACTTTGACCAT 59.303 47.619 13.24 0.72 41.22 3.55
3189 3650 1.070134 CTCGAGGTCCAACTTTGACCA 59.930 52.381 13.24 0.00 41.22 4.02
3190 3651 1.343465 TCTCGAGGTCCAACTTTGACC 59.657 52.381 13.56 4.16 39.18 4.02
3191 3652 2.814280 TCTCGAGGTCCAACTTTGAC 57.186 50.000 13.56 0.00 0.00 3.18
3192 3653 2.548067 GCTTCTCGAGGTCCAACTTTGA 60.548 50.000 13.56 0.00 0.00 2.69
3193 3654 1.801178 GCTTCTCGAGGTCCAACTTTG 59.199 52.381 13.56 0.00 0.00 2.77
3194 3655 1.605712 CGCTTCTCGAGGTCCAACTTT 60.606 52.381 13.56 0.00 41.67 2.66
3195 3656 0.038159 CGCTTCTCGAGGTCCAACTT 60.038 55.000 13.56 0.00 41.67 2.66
3196 3657 1.587054 CGCTTCTCGAGGTCCAACT 59.413 57.895 13.56 0.00 41.67 3.16
3197 3658 2.095252 GCGCTTCTCGAGGTCCAAC 61.095 63.158 13.56 0.00 41.67 3.77
3198 3659 2.261671 GCGCTTCTCGAGGTCCAA 59.738 61.111 13.56 0.00 41.67 3.53
3199 3660 4.116328 CGCGCTTCTCGAGGTCCA 62.116 66.667 13.56 0.00 41.67 4.02
3213 3674 3.302555 TCTAAAATATAGTGCGTCCGCG 58.697 45.455 7.22 0.00 45.51 6.46
3214 3675 5.389516 CCATTCTAAAATATAGTGCGTCCGC 60.390 44.000 4.42 4.42 42.35 5.54
3215 3676 5.924254 TCCATTCTAAAATATAGTGCGTCCG 59.076 40.000 0.00 0.00 0.00 4.79
3216 3677 6.369065 CCTCCATTCTAAAATATAGTGCGTCC 59.631 42.308 0.00 0.00 0.00 4.79
3217 3678 6.369065 CCCTCCATTCTAAAATATAGTGCGTC 59.631 42.308 0.00 0.00 0.00 5.19
3218 3679 6.042781 TCCCTCCATTCTAAAATATAGTGCGT 59.957 38.462 0.00 0.00 0.00 5.24
3219 3680 6.464222 TCCCTCCATTCTAAAATATAGTGCG 58.536 40.000 0.00 0.00 0.00 5.34
3220 3681 7.454225 ACTCCCTCCATTCTAAAATATAGTGC 58.546 38.462 0.00 0.00 0.00 4.40
3226 3687 9.847224 GTTTCATACTCCCTCCATTCTAAAATA 57.153 33.333 0.00 0.00 0.00 1.40
3227 3688 8.336235 TGTTTCATACTCCCTCCATTCTAAAAT 58.664 33.333 0.00 0.00 0.00 1.82
3228 3689 7.610305 GTGTTTCATACTCCCTCCATTCTAAAA 59.390 37.037 0.00 0.00 0.00 1.52
3229 3690 7.110155 GTGTTTCATACTCCCTCCATTCTAAA 58.890 38.462 0.00 0.00 0.00 1.85
3230 3691 6.352737 GGTGTTTCATACTCCCTCCATTCTAA 60.353 42.308 0.00 0.00 34.91 2.10
3231 3692 5.130477 GGTGTTTCATACTCCCTCCATTCTA 59.870 44.000 0.00 0.00 34.91 2.10
3232 3693 4.080299 GGTGTTTCATACTCCCTCCATTCT 60.080 45.833 0.00 0.00 34.91 2.40
3233 3694 4.200092 GGTGTTTCATACTCCCTCCATTC 58.800 47.826 0.00 0.00 34.91 2.67
3234 3695 4.236527 GGTGTTTCATACTCCCTCCATT 57.763 45.455 0.00 0.00 34.91 3.16
3235 3696 3.933861 GGTGTTTCATACTCCCTCCAT 57.066 47.619 0.00 0.00 34.91 3.41
3241 3702 2.237392 AGAGCAGGGTGTTTCATACTCC 59.763 50.000 0.00 0.00 39.25 3.85
3242 3703 3.618690 AGAGCAGGGTGTTTCATACTC 57.381 47.619 0.00 0.00 0.00 2.59
3266 3727 1.886542 CAGAACAAAGGCCCAAGTACC 59.113 52.381 0.00 0.00 0.00 3.34
3281 3742 3.055747 CCTAGGAGGAGGTTGAACAGAAC 60.056 52.174 1.05 0.00 37.67 3.01
3373 4473 7.995488 AGTCATAGTTTTCATGGGGATTTAGAG 59.005 37.037 0.00 0.00 0.00 2.43
3374 4474 7.872138 AGTCATAGTTTTCATGGGGATTTAGA 58.128 34.615 0.00 0.00 0.00 2.10
3375 4475 8.525290 AAGTCATAGTTTTCATGGGGATTTAG 57.475 34.615 0.00 0.00 0.00 1.85
3385 4485 5.182001 GCTGGTGTGAAGTCATAGTTTTCAT 59.818 40.000 0.00 0.00 33.82 2.57
3395 4495 1.419381 TACAGGCTGGTGTGAAGTCA 58.581 50.000 20.34 0.00 31.46 3.41
3486 4598 1.311859 CATCCCATCATTGGTGTCCG 58.688 55.000 0.00 0.00 41.91 4.79
3489 4601 1.285667 TCTGCATCCCATCATTGGTGT 59.714 47.619 0.00 0.00 41.91 4.16
3501 4613 0.182061 TGCATCCTCCTTCTGCATCC 59.818 55.000 0.00 0.00 40.75 3.51
3535 4647 0.175760 TCCTTTTCTCGGCATCGGAG 59.824 55.000 0.00 0.00 36.95 4.63
3576 4688 1.203050 ACCAACCCATTTCAGGTCTGG 60.203 52.381 0.00 0.00 39.48 3.86
3579 4691 3.494223 CCAAAACCAACCCATTTCAGGTC 60.494 47.826 0.00 0.00 36.27 3.85
3590 4702 2.276201 GAAACAGCACCAAAACCAACC 58.724 47.619 0.00 0.00 0.00 3.77
3591 4703 2.929398 CTGAAACAGCACCAAAACCAAC 59.071 45.455 0.00 0.00 0.00 3.77
3596 4708 4.219507 TCAAACTCTGAAACAGCACCAAAA 59.780 37.500 0.00 0.00 0.00 2.44
3597 4709 3.761218 TCAAACTCTGAAACAGCACCAAA 59.239 39.130 0.00 0.00 0.00 3.28
3613 4725 9.820725 TGAATCATCATGTTTTCTTTTCAAACT 57.179 25.926 0.00 0.00 35.50 2.66
3615 4727 8.767085 GCTGAATCATCATGTTTTCTTTTCAAA 58.233 29.630 0.00 0.00 34.37 2.69
3616 4728 7.927092 TGCTGAATCATCATGTTTTCTTTTCAA 59.073 29.630 0.00 0.00 34.37 2.69
3617 4729 7.435305 TGCTGAATCATCATGTTTTCTTTTCA 58.565 30.769 0.00 0.00 34.37 2.69
3618 4730 7.878477 TGCTGAATCATCATGTTTTCTTTTC 57.122 32.000 0.00 0.00 34.37 2.29
3619 4731 7.929785 AGTTGCTGAATCATCATGTTTTCTTTT 59.070 29.630 0.00 0.00 34.37 2.27
3620 4732 7.439381 AGTTGCTGAATCATCATGTTTTCTTT 58.561 30.769 0.00 0.00 34.37 2.52
3621 4733 6.989659 AGTTGCTGAATCATCATGTTTTCTT 58.010 32.000 0.00 0.00 34.37 2.52
3622 4734 6.585695 AGTTGCTGAATCATCATGTTTTCT 57.414 33.333 0.00 0.00 34.37 2.52
3623 4735 7.647907 AAAGTTGCTGAATCATCATGTTTTC 57.352 32.000 0.00 0.00 34.37 2.29
3624 4736 9.545105 TTAAAAGTTGCTGAATCATCATGTTTT 57.455 25.926 9.99 9.99 34.37 2.43
3625 4737 9.715121 ATTAAAAGTTGCTGAATCATCATGTTT 57.285 25.926 0.00 0.00 34.37 2.83
3626 4738 9.362539 GATTAAAAGTTGCTGAATCATCATGTT 57.637 29.630 0.00 0.00 34.37 2.71
3627 4739 8.525316 TGATTAAAAGTTGCTGAATCATCATGT 58.475 29.630 0.00 0.00 32.90 3.21
3628 4740 8.920509 TGATTAAAAGTTGCTGAATCATCATG 57.079 30.769 0.00 0.00 32.90 3.07
3636 4748 9.748708 GCCATATATTGATTAAAAGTTGCTGAA 57.251 29.630 0.00 0.00 0.00 3.02
3637 4749 8.911965 TGCCATATATTGATTAAAAGTTGCTGA 58.088 29.630 0.00 0.00 0.00 4.26
3638 4750 9.701098 ATGCCATATATTGATTAAAAGTTGCTG 57.299 29.630 0.00 0.00 0.00 4.41
3642 4754 9.840427 GCGTATGCCATATATTGATTAAAAGTT 57.160 29.630 0.00 0.00 33.98 2.66
3643 4755 9.231297 AGCGTATGCCATATATTGATTAAAAGT 57.769 29.630 2.51 0.00 44.31 2.66
3646 4758 9.660180 TGTAGCGTATGCCATATATTGATTAAA 57.340 29.630 2.51 0.00 44.31 1.52
3647 4759 9.093970 GTGTAGCGTATGCCATATATTGATTAA 57.906 33.333 2.51 0.00 44.31 1.40
3648 4760 8.254508 TGTGTAGCGTATGCCATATATTGATTA 58.745 33.333 2.51 0.00 44.31 1.75
3649 4761 7.102993 TGTGTAGCGTATGCCATATATTGATT 58.897 34.615 2.51 0.00 44.31 2.57
3650 4762 6.639563 TGTGTAGCGTATGCCATATATTGAT 58.360 36.000 2.51 0.00 44.31 2.57
3651 4763 6.031751 TGTGTAGCGTATGCCATATATTGA 57.968 37.500 2.51 0.00 44.31 2.57
3652 4764 5.220472 GCTGTGTAGCGTATGCCATATATTG 60.220 44.000 2.51 0.00 44.31 1.90
3653 4765 4.870426 GCTGTGTAGCGTATGCCATATATT 59.130 41.667 2.51 0.00 44.31 1.28
3654 4766 4.433615 GCTGTGTAGCGTATGCCATATAT 58.566 43.478 2.51 0.00 44.31 0.86
3655 4767 3.845178 GCTGTGTAGCGTATGCCATATA 58.155 45.455 2.51 0.00 44.31 0.86
3656 4768 2.688507 GCTGTGTAGCGTATGCCATAT 58.311 47.619 2.51 0.00 44.31 1.78
3657 4769 2.148916 GCTGTGTAGCGTATGCCATA 57.851 50.000 2.51 0.00 44.31 2.74
3658 4770 2.992089 GCTGTGTAGCGTATGCCAT 58.008 52.632 2.51 0.00 44.31 4.40
3659 4771 4.513519 GCTGTGTAGCGTATGCCA 57.486 55.556 2.51 0.00 44.31 4.92
3664 4776 6.965988 GCAAGAGCTTAGCTGTGTAGCGTA 62.966 50.000 13.01 0.00 45.82 4.42
3666 4778 3.862291 GCAAGAGCTTAGCTGTGTAGCG 61.862 54.545 13.01 0.00 45.82 4.26
3667 4779 1.663135 GCAAGAGCTTAGCTGTGTAGC 59.337 52.381 13.01 9.62 43.45 3.58
3668 4780 2.964740 TGCAAGAGCTTAGCTGTGTAG 58.035 47.619 13.01 2.85 39.88 2.74
3669 4781 3.401033 TTGCAAGAGCTTAGCTGTGTA 57.599 42.857 13.01 6.32 39.88 2.90
3670 4782 2.260844 TTGCAAGAGCTTAGCTGTGT 57.739 45.000 13.01 0.00 39.88 3.72
3671 4783 3.311871 CCTATTGCAAGAGCTTAGCTGTG 59.688 47.826 13.01 10.78 39.88 3.66
3672 4784 3.198635 TCCTATTGCAAGAGCTTAGCTGT 59.801 43.478 13.01 4.18 39.88 4.40
3673 4785 3.801698 TCCTATTGCAAGAGCTTAGCTG 58.198 45.455 13.01 0.00 39.88 4.24
3674 4786 4.494091 TTCCTATTGCAAGAGCTTAGCT 57.506 40.909 15.69 6.37 43.88 3.32
3675 4787 5.764487 ATTTCCTATTGCAAGAGCTTAGC 57.236 39.130 15.69 0.00 42.74 3.09
3676 4788 6.319658 TGGAATTTCCTATTGCAAGAGCTTAG 59.680 38.462 15.69 6.32 38.47 2.18
3677 4789 6.186957 TGGAATTTCCTATTGCAAGAGCTTA 58.813 36.000 15.69 2.93 38.47 3.09
3678 4790 5.018809 TGGAATTTCCTATTGCAAGAGCTT 58.981 37.500 15.69 5.94 38.47 3.74
3679 4791 4.603131 TGGAATTTCCTATTGCAAGAGCT 58.397 39.130 15.69 0.00 38.47 4.09
3680 4792 4.735873 GCTGGAATTTCCTATTGCAAGAGC 60.736 45.833 15.69 9.41 37.46 4.09
3681 4793 4.497006 CGCTGGAATTTCCTATTGCAAGAG 60.497 45.833 14.22 14.22 37.46 2.85
3682 4794 3.378112 CGCTGGAATTTCCTATTGCAAGA 59.622 43.478 16.25 0.00 37.46 3.02
3683 4795 3.378112 TCGCTGGAATTTCCTATTGCAAG 59.622 43.478 16.25 4.88 37.46 4.01
3684 4796 3.351740 TCGCTGGAATTTCCTATTGCAA 58.648 40.909 16.25 0.00 37.46 4.08
3685 4797 2.997980 TCGCTGGAATTTCCTATTGCA 58.002 42.857 16.25 0.00 37.46 4.08
3686 4798 3.793465 GCTTCGCTGGAATTTCCTATTGC 60.793 47.826 16.25 13.03 37.46 3.56
3687 4799 3.546815 CGCTTCGCTGGAATTTCCTATTG 60.547 47.826 16.25 4.48 37.46 1.90
3688 4800 2.614057 CGCTTCGCTGGAATTTCCTATT 59.386 45.455 16.25 0.00 37.46 1.73
3689 4801 2.213499 CGCTTCGCTGGAATTTCCTAT 58.787 47.619 16.25 0.00 37.46 2.57
3690 4802 1.651987 CGCTTCGCTGGAATTTCCTA 58.348 50.000 16.25 2.72 37.46 2.94
3691 4803 2.471255 CGCTTCGCTGGAATTTCCT 58.529 52.632 16.25 0.00 37.46 3.36
3703 4815 2.050477 AACAAATTTCTGGCGCTTCG 57.950 45.000 7.64 0.00 0.00 3.79
3704 4816 3.242518 GGTAACAAATTTCTGGCGCTTC 58.757 45.455 7.64 0.00 0.00 3.86
3705 4817 2.029380 GGGTAACAAATTTCTGGCGCTT 60.029 45.455 7.64 0.00 39.74 4.68
3706 4818 1.544246 GGGTAACAAATTTCTGGCGCT 59.456 47.619 7.64 0.00 39.74 5.92
3707 4819 1.544246 AGGGTAACAAATTTCTGGCGC 59.456 47.619 0.00 0.00 39.74 6.53
3708 4820 3.934457 AAGGGTAACAAATTTCTGGCG 57.066 42.857 0.00 0.00 39.74 5.69
3709 4821 5.208463 TCAAAGGGTAACAAATTTCTGGC 57.792 39.130 0.00 0.00 39.74 4.85
3710 4822 8.802267 TCTTATCAAAGGGTAACAAATTTCTGG 58.198 33.333 0.00 0.00 39.74 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.