Multiple sequence alignment - TraesCS4A01G186900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G186900 chr4A 100.000 7463 0 0 1 7463 465800828 465793366 0.000000e+00 13745.0
1 TraesCS4A01G186900 chr4A 87.500 104 12 1 3884 3986 252667315 252667418 1.320000e-22 119.0
2 TraesCS4A01G186900 chr4D 93.030 4907 216 52 1679 6541 111134340 111139164 0.000000e+00 7070.0
3 TraesCS4A01G186900 chr4D 92.264 711 34 3 946 1653 111133578 111134270 0.000000e+00 989.0
4 TraesCS4A01G186900 chr4D 88.530 279 25 6 1 273 111132925 111133202 1.550000e-86 331.0
5 TraesCS4A01G186900 chr4D 88.166 169 18 2 7258 7425 500456410 500456577 4.570000e-47 200.0
6 TraesCS4A01G186900 chr4D 86.705 173 23 0 7259 7431 243613271 243613443 7.640000e-45 193.0
7 TraesCS4A01G186900 chr4D 87.288 118 11 3 6576 6691 111139170 111139285 1.690000e-26 132.0
8 TraesCS4A01G186900 chr4D 89.691 97 8 2 3884 3979 363573813 363573718 1.020000e-23 122.0
9 TraesCS4A01G186900 chr4D 89.610 77 5 3 819 892 111133485 111133561 2.220000e-15 95.3
10 TraesCS4A01G186900 chr4D 85.075 67 10 0 2852 2918 464229403 464229337 1.340000e-07 69.4
11 TraesCS4A01G186900 chr4D 100.000 29 0 0 7435 7463 111139694 111139722 4.000000e-03 54.7
12 TraesCS4A01G186900 chr4B 92.420 1781 95 22 4374 6141 172317598 172319351 0.000000e+00 2505.0
13 TraesCS4A01G186900 chr4B 88.632 994 61 18 935 1888 172314650 172315631 0.000000e+00 1162.0
14 TraesCS4A01G186900 chr4B 89.532 898 36 17 2011 2862 172315760 172316645 0.000000e+00 1085.0
15 TraesCS4A01G186900 chr4B 81.292 1192 151 39 2854 3988 404562490 404563666 0.000000e+00 905.0
16 TraesCS4A01G186900 chr4B 97.120 382 11 0 6118 6499 172319399 172319780 0.000000e+00 645.0
17 TraesCS4A01G186900 chr4B 86.145 332 34 11 499 828 172314296 172314617 1.540000e-91 348.0
18 TraesCS4A01G186900 chr4B 90.734 259 18 4 20 273 172314043 172314300 2.580000e-89 340.0
19 TraesCS4A01G186900 chr4B 85.174 344 15 13 6644 6982 172319778 172320090 3.360000e-83 320.0
20 TraesCS4A01G186900 chr4B 86.716 271 27 5 3987 4249 172316641 172316910 7.320000e-75 292.0
21 TraesCS4A01G186900 chr4B 93.902 82 5 0 6987 7068 172320132 172320213 2.830000e-24 124.0
22 TraesCS4A01G186900 chr4B 86.792 53 6 1 4035 4087 40030019 40029968 2.910000e-04 58.4
23 TraesCS4A01G186900 chr3B 82.064 1037 147 28 2858 3870 188228503 188229524 0.000000e+00 848.0
24 TraesCS4A01G186900 chr3B 87.647 170 20 1 7262 7430 11107978 11108147 5.910000e-46 196.0
25 TraesCS4A01G186900 chr3B 90.741 54 5 0 4035 4088 708250412 708250359 1.040000e-08 73.1
26 TraesCS4A01G186900 chr3B 83.562 73 10 1 86 156 19384535 19384607 4.830000e-07 67.6
27 TraesCS4A01G186900 chr3B 95.122 41 2 0 560 600 6117930 6117890 1.740000e-06 65.8
28 TraesCS4A01G186900 chr3B 100.000 34 0 0 559 592 159938934 159938967 6.250000e-06 63.9
29 TraesCS4A01G186900 chr2B 81.751 948 143 24 2861 3795 737008988 737008058 0.000000e+00 765.0
30 TraesCS4A01G186900 chr2B 83.438 320 33 11 2924 3230 250761313 250761625 5.700000e-71 279.0
31 TraesCS4A01G186900 chr2B 79.630 216 28 9 297 507 141384289 141384085 2.810000e-29 141.0
32 TraesCS4A01G186900 chr2B 87.500 104 10 3 3887 3988 23004612 23004510 4.730000e-22 117.0
33 TraesCS4A01G186900 chr2B 86.239 109 12 3 3884 3990 209816959 209817066 1.700000e-21 115.0
34 TraesCS4A01G186900 chr2B 97.619 42 0 1 459 500 24849555 24849595 3.740000e-08 71.3
35 TraesCS4A01G186900 chr2B 95.000 40 1 1 559 598 694263470 694263432 2.250000e-05 62.1
36 TraesCS4A01G186900 chr2B 97.059 34 1 0 559 592 368306720 368306753 2.910000e-04 58.4
37 TraesCS4A01G186900 chr6B 79.300 1029 153 30 2882 3870 531734098 531733090 0.000000e+00 665.0
38 TraesCS4A01G186900 chr6B 81.088 809 128 14 3087 3872 233043308 233044114 2.290000e-174 623.0
39 TraesCS4A01G186900 chr6B 89.908 109 9 2 3884 3991 531733041 531732934 1.010000e-28 139.0
40 TraesCS4A01G186900 chr3D 80.700 829 114 30 2881 3679 546392765 546393577 2.980000e-168 603.0
41 TraesCS4A01G186900 chr3D 88.679 106 12 0 3883 3988 58599184 58599289 6.080000e-26 130.0
42 TraesCS4A01G186900 chr6D 81.627 664 112 8 3213 3869 134333610 134334270 6.590000e-150 542.0
43 TraesCS4A01G186900 chr6D 81.297 663 116 6 3213 3869 134738564 134739224 1.430000e-146 531.0
44 TraesCS4A01G186900 chr6D 87.283 173 22 0 7252 7424 137535493 137535321 1.640000e-46 198.0
45 TraesCS4A01G186900 chr6D 86.905 168 22 0 7257 7424 72351054 72350887 9.890000e-44 189.0
46 TraesCS4A01G186900 chr6D 85.311 177 26 0 7251 7427 293177231 293177407 4.600000e-42 183.0
47 TraesCS4A01G186900 chr7D 78.704 864 145 19 3035 3870 477652062 477651210 2.370000e-149 540.0
48 TraesCS4A01G186900 chr7D 82.472 542 85 6 3337 3872 222123717 222124254 4.080000e-127 466.0
49 TraesCS4A01G186900 chr7D 79.499 439 67 18 2315 2744 64482713 64483137 2.630000e-74 291.0
50 TraesCS4A01G186900 chr7D 81.643 207 29 5 298 501 113188573 113188373 5.990000e-36 163.0
51 TraesCS4A01G186900 chr7D 81.395 86 14 2 4010 4093 332725721 332725806 1.340000e-07 69.4
52 TraesCS4A01G186900 chr2A 77.801 964 153 28 2956 3871 69337641 69336691 8.520000e-149 538.0
53 TraesCS4A01G186900 chr2A 89.103 156 15 2 2859 3012 685647594 685647749 7.640000e-45 193.0
54 TraesCS4A01G186900 chr2A 75.234 214 35 13 293 500 607948264 607948465 1.330000e-12 86.1
55 TraesCS4A01G186900 chr2A 95.455 44 2 0 457 500 83638425 83638382 3.740000e-08 71.3
56 TraesCS4A01G186900 chr1A 83.925 535 53 12 2864 3367 548432125 548431593 1.460000e-131 481.0
57 TraesCS4A01G186900 chr5A 90.000 170 17 0 7258 7427 505768644 505768813 3.510000e-53 220.0
58 TraesCS4A01G186900 chr5A 75.701 321 51 20 2429 2741 523427247 523426946 1.310000e-27 135.0
59 TraesCS4A01G186900 chr5A 87.619 105 12 1 3884 3987 180365547 180365651 3.660000e-23 121.0
60 TraesCS4A01G186900 chr5A 75.978 179 25 11 328 500 2127151 2126985 8.030000e-10 76.8
61 TraesCS4A01G186900 chr5A 97.561 41 1 0 559 599 680077972 680077932 3.740000e-08 71.3
62 TraesCS4A01G186900 chr5A 95.000 40 2 0 559 598 664979205 664979166 6.250000e-06 63.9
63 TraesCS4A01G186900 chr5B 72.204 939 185 50 2859 3753 455879495 455878589 1.260000e-52 219.0
64 TraesCS4A01G186900 chr5B 76.471 204 30 11 303 500 327782655 327782464 2.220000e-15 95.3
65 TraesCS4A01G186900 chr5B 97.297 37 1 0 1780 1816 9493038 9493002 6.250000e-06 63.9
66 TraesCS4A01G186900 chr7A 87.273 165 21 0 7260 7424 337925921 337926085 9.890000e-44 189.0
67 TraesCS4A01G186900 chr7A 81.448 221 31 8 2492 2708 729444605 729444391 9.960000e-39 172.0
68 TraesCS4A01G186900 chr7A 80.995 221 32 7 2492 2708 729491493 729491279 4.630000e-37 167.0
69 TraesCS4A01G186900 chr7A 89.041 73 5 1 438 510 712149220 712149289 3.710000e-13 87.9
70 TraesCS4A01G186900 chr7A 90.323 62 5 1 2854 2915 731777624 731777684 6.210000e-11 80.5
71 TraesCS4A01G186900 chr7A 97.222 36 1 0 559 594 648558416 648558451 2.250000e-05 62.1
72 TraesCS4A01G186900 chr2D 86.471 170 23 0 7259 7428 288620473 288620642 3.560000e-43 187.0
73 TraesCS4A01G186900 chr2D 93.023 43 3 0 459 501 537317471 537317429 6.250000e-06 63.9
74 TraesCS4A01G186900 chr2D 97.222 36 1 0 559 594 612999420 612999385 2.250000e-05 62.1
75 TraesCS4A01G186900 chr5D 85.549 173 25 0 7256 7428 12037466 12037638 1.650000e-41 182.0
76 TraesCS4A01G186900 chr5D 81.287 171 24 7 2575 2741 411512831 411512665 1.690000e-26 132.0
77 TraesCS4A01G186900 chr5D 74.532 267 38 15 1780 2043 9487405 9487166 1.030000e-13 89.8
78 TraesCS4A01G186900 chr1D 83.173 208 23 9 1759 1958 392028316 392028113 5.950000e-41 180.0
79 TraesCS4A01G186900 chr1D 97.297 37 1 0 558 594 219480706 219480670 6.250000e-06 63.9
80 TraesCS4A01G186900 chr1B 84.663 163 18 6 1759 1916 530608863 530609023 1.000000e-33 156.0
81 TraesCS4A01G186900 chr1B 100.000 30 0 0 2768 2797 469148665 469148694 1.000000e-03 56.5
82 TraesCS4A01G186900 chr3A 90.566 106 10 0 3885 3990 144532911 144533016 2.810000e-29 141.0
83 TraesCS4A01G186900 chr3A 97.727 44 1 0 458 501 610056710 610056667 8.030000e-10 76.8
84 TraesCS4A01G186900 chr3A 88.333 60 6 1 4035 4093 671651213 671651154 3.740000e-08 71.3
85 TraesCS4A01G186900 chr7B 82.400 125 16 4 2859 2981 516915360 516915240 3.680000e-18 104.0
86 TraesCS4A01G186900 chr6A 88.333 60 7 0 2859 2918 171788720 171788661 1.040000e-08 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G186900 chr4A 465793366 465800828 7462 True 13745.000000 13745 100.000000 1 7463 1 chr4A.!!$R1 7462
1 TraesCS4A01G186900 chr4D 111132925 111139722 6797 False 1445.333333 7070 91.787000 1 7463 6 chr4D.!!$F3 7462
2 TraesCS4A01G186900 chr4B 404562490 404563666 1176 False 905.000000 905 81.292000 2854 3988 1 chr4B.!!$F1 1134
3 TraesCS4A01G186900 chr4B 172314043 172320213 6170 False 757.888889 2505 90.041667 20 7068 9 chr4B.!!$F2 7048
4 TraesCS4A01G186900 chr3B 188228503 188229524 1021 False 848.000000 848 82.064000 2858 3870 1 chr3B.!!$F4 1012
5 TraesCS4A01G186900 chr2B 737008058 737008988 930 True 765.000000 765 81.751000 2861 3795 1 chr2B.!!$R4 934
6 TraesCS4A01G186900 chr6B 233043308 233044114 806 False 623.000000 623 81.088000 3087 3872 1 chr6B.!!$F1 785
7 TraesCS4A01G186900 chr6B 531732934 531734098 1164 True 402.000000 665 84.604000 2882 3991 2 chr6B.!!$R1 1109
8 TraesCS4A01G186900 chr3D 546392765 546393577 812 False 603.000000 603 80.700000 2881 3679 1 chr3D.!!$F2 798
9 TraesCS4A01G186900 chr6D 134333610 134334270 660 False 542.000000 542 81.627000 3213 3869 1 chr6D.!!$F1 656
10 TraesCS4A01G186900 chr6D 134738564 134739224 660 False 531.000000 531 81.297000 3213 3869 1 chr6D.!!$F2 656
11 TraesCS4A01G186900 chr7D 477651210 477652062 852 True 540.000000 540 78.704000 3035 3870 1 chr7D.!!$R2 835
12 TraesCS4A01G186900 chr7D 222123717 222124254 537 False 466.000000 466 82.472000 3337 3872 1 chr7D.!!$F2 535
13 TraesCS4A01G186900 chr2A 69336691 69337641 950 True 538.000000 538 77.801000 2956 3871 1 chr2A.!!$R1 915
14 TraesCS4A01G186900 chr1A 548431593 548432125 532 True 481.000000 481 83.925000 2864 3367 1 chr1A.!!$R1 503
15 TraesCS4A01G186900 chr5B 455878589 455879495 906 True 219.000000 219 72.204000 2859 3753 1 chr5B.!!$R3 894

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
362 369 0.113580 TAAAACAGGTTGGGGAGGGC 59.886 55.000 0.00 0.0 0.00 5.19 F
510 517 0.179076 CCGCCACTGCAGATGTATGA 60.179 55.000 23.35 0.0 37.32 2.15 F
1467 1491 0.104304 AGCTTGTCTTCGACACCGTT 59.896 50.000 0.00 0.0 42.60 4.44 F
1778 1857 0.035630 GGGCAGTCTCAGTGCTCAAT 60.036 55.000 3.44 0.0 44.36 2.57 F
2711 2901 0.326264 GCTCCTCTTGGATGGTGTGT 59.674 55.000 0.00 0.0 42.29 3.72 F
3599 3917 1.065636 TCATACTCCTCCGTCTCACGT 60.066 52.381 0.00 0.0 40.58 4.49 F
4112 4479 0.926155 CATGATCGCGTCAAGAGTGG 59.074 55.000 5.77 0.0 40.97 4.00 F
5958 6907 0.251341 AAGTCCCCACCAATGAGCAC 60.251 55.000 0.00 0.0 0.00 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1367 1391 0.041982 GTTGTCCTCCTCCTCCTCCT 59.958 60.0 0.00 0.0 0.00 3.69 R
1635 1659 0.257616 GCCCACTACAAGCCCCATTA 59.742 55.0 0.00 0.0 0.00 1.90 R
2755 2945 0.320247 CCATCTCCGAGCCATGTAGC 60.320 60.0 0.00 0.0 0.00 3.58 R
3491 3774 0.331278 TCATGCCGGTGAAAAGGGAT 59.669 50.0 1.90 0.0 39.22 3.85 R
3889 4255 0.674534 CCAGACCAGAGCCCGTATAC 59.325 60.0 0.00 0.0 0.00 1.47 R
4898 5841 0.322187 AATATATTGGCCCCGGCGTC 60.322 55.0 6.01 0.0 43.06 5.19 R
6006 6955 0.321564 ACAGCCTGAATACAAGCGCA 60.322 50.0 11.47 0.0 38.37 6.09 R
7108 8179 0.180171 CCTATCCATGAACGGCCACA 59.820 55.0 2.24 0.0 0.00 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 40 4.276678 TCCTCAAGATTTGTTTGCACTCTG 59.723 41.667 0.00 0.00 0.00 3.35
156 160 6.323482 TCCAACATTGTGAGAATCCTTTGAAA 59.677 34.615 0.00 0.00 0.00 2.69
158 162 7.170320 CCAACATTGTGAGAATCCTTTGAAAAG 59.830 37.037 0.00 0.00 35.79 2.27
159 163 6.218746 ACATTGTGAGAATCCTTTGAAAAGC 58.781 36.000 0.00 0.00 34.69 3.51
161 165 3.253188 TGTGAGAATCCTTTGAAAAGCCG 59.747 43.478 0.00 0.00 34.69 5.52
185 192 7.355778 CGATTTTTAGCTAGATCAATGTTCCC 58.644 38.462 0.00 0.00 0.00 3.97
221 228 4.405116 TTTTGCAACTTTGGAAGCTCAT 57.595 36.364 0.00 0.00 39.65 2.90
276 283 2.271821 TGCGCAGGGTGCATGTAT 59.728 55.556 5.66 0.00 44.36 2.29
277 284 2.114051 TGCGCAGGGTGCATGTATG 61.114 57.895 5.66 0.00 44.36 2.39
287 294 4.054085 CATGTATGCAGAGGCCGG 57.946 61.111 0.00 0.00 40.13 6.13
288 295 1.146930 CATGTATGCAGAGGCCGGT 59.853 57.895 1.90 0.00 40.13 5.28
289 296 1.146930 ATGTATGCAGAGGCCGGTG 59.853 57.895 1.90 0.00 40.13 4.94
290 297 2.897350 GTATGCAGAGGCCGGTGC 60.897 66.667 21.80 21.80 40.13 5.01
295 302 2.584064 CAGAGGCCGGTGCATGTA 59.416 61.111 1.90 0.00 40.13 2.29
296 303 1.146930 CAGAGGCCGGTGCATGTAT 59.853 57.895 1.90 0.00 40.13 2.29
297 304 1.146930 AGAGGCCGGTGCATGTATG 59.853 57.895 1.90 0.00 40.13 2.39
308 315 2.910205 CATGTATGCAGAGGCGGAG 58.090 57.895 0.00 0.00 45.35 4.63
309 316 0.602106 CATGTATGCAGAGGCGGAGG 60.602 60.000 0.00 0.00 45.35 4.30
321 328 1.581447 GCGGAGGCAGAAACTTTGG 59.419 57.895 0.00 0.00 39.62 3.28
322 329 0.889186 GCGGAGGCAGAAACTTTGGA 60.889 55.000 0.00 0.00 39.62 3.53
323 330 1.826385 CGGAGGCAGAAACTTTGGAT 58.174 50.000 0.00 0.00 0.00 3.41
324 331 2.162681 CGGAGGCAGAAACTTTGGATT 58.837 47.619 0.00 0.00 0.00 3.01
325 332 3.343617 CGGAGGCAGAAACTTTGGATTA 58.656 45.455 0.00 0.00 0.00 1.75
326 333 3.375299 CGGAGGCAGAAACTTTGGATTAG 59.625 47.826 0.00 0.00 0.00 1.73
327 334 3.696548 GGAGGCAGAAACTTTGGATTAGG 59.303 47.826 0.00 0.00 0.00 2.69
328 335 3.696548 GAGGCAGAAACTTTGGATTAGGG 59.303 47.826 0.00 0.00 0.00 3.53
329 336 2.760650 GGCAGAAACTTTGGATTAGGGG 59.239 50.000 0.00 0.00 0.00 4.79
330 337 2.760650 GCAGAAACTTTGGATTAGGGGG 59.239 50.000 0.00 0.00 0.00 5.40
347 354 3.375647 GGGGGCCAAGTGATACTAAAA 57.624 47.619 4.39 0.00 0.00 1.52
348 355 3.021695 GGGGGCCAAGTGATACTAAAAC 58.978 50.000 4.39 0.00 0.00 2.43
349 356 3.562609 GGGGGCCAAGTGATACTAAAACA 60.563 47.826 4.39 0.00 0.00 2.83
350 357 3.694566 GGGGCCAAGTGATACTAAAACAG 59.305 47.826 4.39 0.00 0.00 3.16
351 358 3.694566 GGGCCAAGTGATACTAAAACAGG 59.305 47.826 4.39 0.00 0.00 4.00
352 359 4.332828 GGCCAAGTGATACTAAAACAGGT 58.667 43.478 0.00 0.00 0.00 4.00
353 360 4.765339 GGCCAAGTGATACTAAAACAGGTT 59.235 41.667 0.00 0.00 0.00 3.50
354 361 5.335661 GGCCAAGTGATACTAAAACAGGTTG 60.336 44.000 0.00 0.00 0.00 3.77
355 362 5.335661 GCCAAGTGATACTAAAACAGGTTGG 60.336 44.000 0.00 0.00 34.56 3.77
356 363 5.183140 CCAAGTGATACTAAAACAGGTTGGG 59.817 44.000 0.00 0.00 31.05 4.12
357 364 4.918588 AGTGATACTAAAACAGGTTGGGG 58.081 43.478 0.00 0.00 0.00 4.96
358 365 4.600111 AGTGATACTAAAACAGGTTGGGGA 59.400 41.667 0.00 0.00 0.00 4.81
359 366 4.941873 GTGATACTAAAACAGGTTGGGGAG 59.058 45.833 0.00 0.00 0.00 4.30
360 367 2.971901 ACTAAAACAGGTTGGGGAGG 57.028 50.000 0.00 0.00 0.00 4.30
361 368 1.427753 ACTAAAACAGGTTGGGGAGGG 59.572 52.381 0.00 0.00 0.00 4.30
362 369 0.113580 TAAAACAGGTTGGGGAGGGC 59.886 55.000 0.00 0.00 0.00 5.19
363 370 2.673027 AAAACAGGTTGGGGAGGGCC 62.673 60.000 0.00 0.00 0.00 5.80
364 371 4.938756 ACAGGTTGGGGAGGGCCA 62.939 66.667 6.18 0.00 35.15 5.36
365 372 3.589542 CAGGTTGGGGAGGGCCAA 61.590 66.667 6.18 0.00 35.15 4.52
366 373 2.785389 AGGTTGGGGAGGGCCAAA 60.785 61.111 6.18 0.00 35.15 3.28
367 374 2.176812 AGGTTGGGGAGGGCCAAAT 61.177 57.895 6.18 0.00 35.15 2.32
368 375 1.685765 GGTTGGGGAGGGCCAAATC 60.686 63.158 6.18 0.00 35.15 2.17
369 376 1.388133 GTTGGGGAGGGCCAAATCT 59.612 57.895 6.18 0.00 35.15 2.40
370 377 0.252239 GTTGGGGAGGGCCAAATCTT 60.252 55.000 6.18 0.00 35.15 2.40
371 378 1.006639 GTTGGGGAGGGCCAAATCTTA 59.993 52.381 6.18 0.00 35.15 2.10
372 379 0.926293 TGGGGAGGGCCAAATCTTAG 59.074 55.000 6.18 0.00 35.15 2.18
373 380 1.222567 GGGGAGGGCCAAATCTTAGA 58.777 55.000 6.18 0.00 35.15 2.10
374 381 1.569072 GGGGAGGGCCAAATCTTAGAA 59.431 52.381 6.18 0.00 35.15 2.10
375 382 2.024369 GGGGAGGGCCAAATCTTAGAAA 60.024 50.000 6.18 0.00 35.15 2.52
376 383 3.565670 GGGGAGGGCCAAATCTTAGAAAA 60.566 47.826 6.18 0.00 35.15 2.29
377 384 3.701542 GGGAGGGCCAAATCTTAGAAAAG 59.298 47.826 6.18 0.00 35.15 2.27
378 385 4.344978 GGAGGGCCAAATCTTAGAAAAGT 58.655 43.478 6.18 0.00 34.13 2.66
379 386 5.506708 GGAGGGCCAAATCTTAGAAAAGTA 58.493 41.667 6.18 0.00 34.13 2.24
380 387 5.590663 GGAGGGCCAAATCTTAGAAAAGTAG 59.409 44.000 6.18 0.00 34.13 2.57
381 388 6.388619 AGGGCCAAATCTTAGAAAAGTAGA 57.611 37.500 6.18 0.00 34.13 2.59
382 389 6.974795 AGGGCCAAATCTTAGAAAAGTAGAT 58.025 36.000 6.18 0.00 34.13 1.98
383 390 6.830838 AGGGCCAAATCTTAGAAAAGTAGATG 59.169 38.462 6.18 0.00 34.13 2.90
384 391 6.460261 GGGCCAAATCTTAGAAAAGTAGATGC 60.460 42.308 4.39 0.00 34.13 3.91
385 392 6.319911 GGCCAAATCTTAGAAAAGTAGATGCT 59.680 38.462 0.00 0.00 34.13 3.79
386 393 7.148000 GGCCAAATCTTAGAAAAGTAGATGCTT 60.148 37.037 0.00 0.00 34.13 3.91
387 394 8.893727 GCCAAATCTTAGAAAAGTAGATGCTTA 58.106 33.333 0.00 0.00 34.13 3.09
429 436 9.836864 TGATGCTACACTATTCATCAGTAATTT 57.163 29.630 0.00 0.00 39.98 1.82
442 449 7.959733 TCATCAGTAATTTAGTAGCAACAACG 58.040 34.615 0.00 0.00 0.00 4.10
443 450 7.601130 TCATCAGTAATTTAGTAGCAACAACGT 59.399 33.333 0.00 0.00 0.00 3.99
444 451 7.112528 TCAGTAATTTAGTAGCAACAACGTG 57.887 36.000 0.00 0.00 0.00 4.49
445 452 6.924612 TCAGTAATTTAGTAGCAACAACGTGA 59.075 34.615 0.00 0.00 0.00 4.35
446 453 7.601130 TCAGTAATTTAGTAGCAACAACGTGAT 59.399 33.333 0.00 0.00 0.00 3.06
447 454 7.688167 CAGTAATTTAGTAGCAACAACGTGATG 59.312 37.037 0.00 0.00 0.00 3.07
448 455 6.554334 AATTTAGTAGCAACAACGTGATGT 57.446 33.333 0.00 0.00 34.24 3.06
449 456 5.994887 TTTAGTAGCAACAACGTGATGTT 57.005 34.783 0.00 0.00 44.08 2.71
450 457 7.661127 ATTTAGTAGCAACAACGTGATGTTA 57.339 32.000 5.35 0.00 41.44 2.41
451 458 6.699895 TTAGTAGCAACAACGTGATGTTAG 57.300 37.500 5.35 2.73 41.44 2.34
452 459 3.994392 AGTAGCAACAACGTGATGTTAGG 59.006 43.478 5.35 0.00 41.44 2.69
453 460 2.151202 AGCAACAACGTGATGTTAGGG 58.849 47.619 5.35 0.00 41.44 3.53
454 461 1.199097 GCAACAACGTGATGTTAGGGG 59.801 52.381 5.35 0.00 41.44 4.79
455 462 1.810151 CAACAACGTGATGTTAGGGGG 59.190 52.381 5.35 0.00 41.44 5.40
489 496 4.729918 CTGCTGGCACCCCCTGTC 62.730 72.222 0.00 0.00 35.15 3.51
491 498 4.416738 GCTGGCACCCCCTGTCTC 62.417 72.222 0.00 0.00 35.15 3.36
492 499 3.721706 CTGGCACCCCCTGTCTCC 61.722 72.222 0.00 0.00 0.00 3.71
499 506 4.087892 CCCCTGTCTCCGCCACTG 62.088 72.222 0.00 0.00 0.00 3.66
500 507 4.767255 CCCTGTCTCCGCCACTGC 62.767 72.222 0.00 0.00 0.00 4.40
501 508 4.007644 CCTGTCTCCGCCACTGCA 62.008 66.667 0.00 0.00 37.32 4.41
502 509 2.433838 CTGTCTCCGCCACTGCAG 60.434 66.667 13.48 13.48 37.32 4.41
510 517 0.179076 CCGCCACTGCAGATGTATGA 60.179 55.000 23.35 0.00 37.32 2.15
544 551 8.641499 TTCATTGGTCAACACATAAAAGAAAC 57.359 30.769 0.00 0.00 0.00 2.78
607 617 7.743116 TGGAGGGAGTAATATAACTCAAACA 57.257 36.000 6.85 0.00 46.40 2.83
701 711 9.567848 AACAAAAATTGTACACACTAGAAACAG 57.432 29.630 0.00 0.00 44.59 3.16
724 735 6.691818 CAGATTTCACAAAGATAGCAAGCATC 59.308 38.462 0.00 0.00 0.00 3.91
733 744 7.175641 ACAAAGATAGCAAGCATCTAACTGTTT 59.824 33.333 0.00 0.00 32.40 2.83
893 909 2.519441 CCCATGAGGCCATCCCTG 59.481 66.667 5.01 0.00 46.60 4.45
894 910 2.389449 CCCATGAGGCCATCCCTGT 61.389 63.158 5.01 0.00 46.60 4.00
895 911 1.061905 CCCATGAGGCCATCCCTGTA 61.062 60.000 5.01 0.00 46.60 2.74
896 912 0.399454 CCATGAGGCCATCCCTGTAG 59.601 60.000 5.01 0.00 46.60 2.74
897 913 0.250640 CATGAGGCCATCCCTGTAGC 60.251 60.000 5.01 0.00 46.60 3.58
898 914 1.762522 ATGAGGCCATCCCTGTAGCG 61.763 60.000 5.01 0.00 46.60 4.26
899 915 3.164269 AGGCCATCCCTGTAGCGG 61.164 66.667 5.01 0.00 44.28 5.52
900 916 4.256180 GGCCATCCCTGTAGCGGG 62.256 72.222 0.00 0.00 46.13 6.13
907 923 3.083997 CCTGTAGCGGGGCTCCTT 61.084 66.667 0.00 0.00 40.44 3.36
908 924 2.187946 CTGTAGCGGGGCTCCTTG 59.812 66.667 0.00 0.00 40.44 3.61
909 925 4.096003 TGTAGCGGGGCTCCTTGC 62.096 66.667 0.00 0.00 40.44 4.01
928 944 3.069778 GGGCGGATGGTCCCTATC 58.930 66.667 0.00 0.00 39.46 2.08
929 945 1.536662 GGGCGGATGGTCCCTATCT 60.537 63.158 0.00 0.00 39.46 1.98
930 946 1.545706 GGGCGGATGGTCCCTATCTC 61.546 65.000 0.00 0.00 39.46 2.75
931 947 0.543174 GGCGGATGGTCCCTATCTCT 60.543 60.000 0.00 0.00 31.13 3.10
932 948 0.892063 GCGGATGGTCCCTATCTCTC 59.108 60.000 0.00 0.00 31.13 3.20
933 949 1.169577 CGGATGGTCCCTATCTCTCG 58.830 60.000 0.00 0.00 31.13 4.04
969 990 1.373497 GAGCGGTGGTGACAGTGAG 60.373 63.158 0.00 0.00 44.46 3.51
1092 1113 2.365617 TCCCAGAAAGCTTAGCCTATCG 59.634 50.000 0.00 0.00 0.00 2.92
1273 1297 2.290323 GGCAATAATAGGGCTGACGGAT 60.290 50.000 0.00 0.00 0.00 4.18
1323 1347 1.372623 GGTGGAGGACAACGACGAC 60.373 63.158 0.00 0.00 0.00 4.34
1338 1362 1.753078 CGACATGGACGAGGAGGGA 60.753 63.158 8.49 0.00 0.00 4.20
1361 1385 3.768008 ACGAAGTGAAGGAGGAGGA 57.232 52.632 0.00 0.00 42.51 3.71
1362 1386 1.551452 ACGAAGTGAAGGAGGAGGAG 58.449 55.000 0.00 0.00 42.51 3.69
1363 1387 0.820871 CGAAGTGAAGGAGGAGGAGG 59.179 60.000 0.00 0.00 0.00 4.30
1364 1388 1.617263 CGAAGTGAAGGAGGAGGAGGA 60.617 57.143 0.00 0.00 0.00 3.71
1365 1389 2.107366 GAAGTGAAGGAGGAGGAGGAG 58.893 57.143 0.00 0.00 0.00 3.69
1366 1390 0.338120 AGTGAAGGAGGAGGAGGAGG 59.662 60.000 0.00 0.00 0.00 4.30
1367 1391 0.336737 GTGAAGGAGGAGGAGGAGGA 59.663 60.000 0.00 0.00 0.00 3.71
1467 1491 0.104304 AGCTTGTCTTCGACACCGTT 59.896 50.000 0.00 0.00 42.60 4.44
1488 1512 3.778955 CGGATCATAGCCGGGTCT 58.221 61.111 10.79 0.00 44.87 3.85
1536 1560 4.380843 TTCTTCCCCATTCTTTGCTACA 57.619 40.909 0.00 0.00 0.00 2.74
1556 1580 6.634436 GCTACAGTTCTTGTTCTTGTCAATTG 59.366 38.462 0.00 0.00 41.29 2.32
1595 1619 6.680810 CAATTAGTGCAGATGTTCTTTTCCA 58.319 36.000 0.00 0.00 0.00 3.53
1635 1659 2.504367 CAGTTCGAATTTGGGTCCAGT 58.496 47.619 0.00 0.00 0.00 4.00
1637 1661 4.069304 CAGTTCGAATTTGGGTCCAGTAA 58.931 43.478 0.00 0.00 0.00 2.24
1642 1666 2.846665 ATTTGGGTCCAGTAATGGGG 57.153 50.000 9.77 0.00 0.00 4.96
1692 1771 9.630098 GTGTTTCATTATCATGTCATTTTCTGT 57.370 29.630 0.00 0.00 0.00 3.41
1778 1857 0.035630 GGGCAGTCTCAGTGCTCAAT 60.036 55.000 3.44 0.00 44.36 2.57
1825 1912 4.860907 CACCTAAGCAAAAATCTGATGTGC 59.139 41.667 11.30 11.30 35.41 4.57
1904 1997 4.274147 TCTTAGCACCAAAACCAAGACAA 58.726 39.130 0.00 0.00 0.00 3.18
1916 2009 7.763985 CCAAAACCAAGACAACTCATACTTTTT 59.236 33.333 0.00 0.00 0.00 1.94
1919 2012 7.881775 ACCAAGACAACTCATACTTTTTCTT 57.118 32.000 0.00 0.00 0.00 2.52
1922 2015 8.624776 CCAAGACAACTCATACTTTTTCTTTCT 58.375 33.333 0.00 0.00 0.00 2.52
2174 2342 9.317827 TGGGTGATTTAGAAGTAAACTACTAGT 57.682 33.333 0.00 0.00 38.26 2.57
2310 2478 1.187567 GCAGAAACCATGGGGCAAGT 61.188 55.000 18.09 0.00 37.90 3.16
2442 2610 0.746659 GCAAGCCACTCAAACCACTT 59.253 50.000 0.00 0.00 0.00 3.16
2711 2901 0.326264 GCTCCTCTTGGATGGTGTGT 59.674 55.000 0.00 0.00 42.29 3.72
2712 2902 1.947678 GCTCCTCTTGGATGGTGTGTG 60.948 57.143 0.00 0.00 42.29 3.82
2713 2903 1.349026 CTCCTCTTGGATGGTGTGTGT 59.651 52.381 0.00 0.00 42.29 3.72
2755 2945 5.426504 AGTCACTTGAGAGCCTATCATTTG 58.573 41.667 0.00 0.00 0.00 2.32
2803 3016 4.695606 TGGTGAAGATCTACCCCTTAGTT 58.304 43.478 11.43 0.00 36.10 2.24
2886 3099 4.081917 GCATCTCTAGCAGACCCCTTATAC 60.082 50.000 0.00 0.00 32.26 1.47
3027 3254 5.823353 AGAAATCAGTAGAACTAGTAGCGC 58.177 41.667 0.00 0.00 0.00 5.92
3033 3260 6.231951 TCAGTAGAACTAGTAGCGCTCATAT 58.768 40.000 16.34 0.11 0.00 1.78
3127 3362 6.099125 ACTGTAAACCCTACTGCCAAAATTTT 59.901 34.615 0.00 0.00 0.00 1.82
3456 3738 2.835431 GCTCCGGCTCTAGCTCCA 60.835 66.667 5.64 0.00 41.70 3.86
3466 3748 3.306225 GGCTCTAGCTCCATCTTCATCAG 60.306 52.174 1.39 0.00 41.70 2.90
3533 3823 1.972198 CGTACAGGAGCTCAACCCA 59.028 57.895 17.19 0.00 0.00 4.51
3599 3917 1.065636 TCATACTCCTCCGTCTCACGT 60.066 52.381 0.00 0.00 40.58 4.49
3848 4179 1.680989 GGTTTGGCCCCGTATGCTT 60.681 57.895 0.00 0.00 0.00 3.91
4004 4371 1.625818 CTCTTAGTGGGCCACTCAACT 59.374 52.381 40.75 20.95 41.21 3.16
4031 4398 6.294564 GGTTCCTTGTGATCCTAAAACCTTTC 60.295 42.308 0.00 0.00 33.70 2.62
4112 4479 0.926155 CATGATCGCGTCAAGAGTGG 59.074 55.000 5.77 0.00 40.97 4.00
4154 4523 6.483640 CCATACCTCCTAATTAGTTGCAGTTC 59.516 42.308 11.50 0.00 0.00 3.01
4206 4575 8.462811 TGATAGTTTGCTTGTTAAGTTGTTTGA 58.537 29.630 0.00 0.00 0.00 2.69
4663 5604 6.239317 GGCCTTCCTTTCCCATTATTACAATC 60.239 42.308 0.00 0.00 0.00 2.67
4797 5738 3.119602 TCACTAAACCAGATCGAGTTCCG 60.120 47.826 4.20 2.30 40.25 4.30
4898 5841 6.199393 GCTTATACAAAGCACTTATTTCCCG 58.801 40.000 4.91 0.00 42.56 5.14
4900 5843 5.813080 ATACAAAGCACTTATTTCCCGAC 57.187 39.130 0.00 0.00 0.00 4.79
4929 5872 7.174946 CGGGGCCAATATATTAGCCTTAATATG 59.825 40.741 27.17 10.95 42.96 1.78
4931 5874 7.451566 GGGCCAATATATTAGCCTTAATATGGG 59.548 40.741 27.17 9.30 42.96 4.00
4974 5917 9.667107 CTATTCCTGGTAGAAATTTTACAGTCA 57.333 33.333 0.00 0.00 0.00 3.41
5056 5999 1.909700 TGGGACTGTTCAGGAAATGC 58.090 50.000 4.82 0.00 0.00 3.56
5067 6010 5.170748 GTTCAGGAAATGCCCATAAGTTTG 58.829 41.667 0.00 0.00 37.37 2.93
5100 6043 7.154435 AGAATGAAAATGGATCACTGTGAAG 57.846 36.000 15.31 0.00 0.00 3.02
5211 6154 2.778299 TCTGTGCAAGCCTTCGTATTT 58.222 42.857 0.00 0.00 0.00 1.40
5212 6155 2.483877 TCTGTGCAAGCCTTCGTATTTG 59.516 45.455 0.00 0.00 0.00 2.32
5290 6234 4.636206 GCTTGGTAATTGGACTCAGGTAAG 59.364 45.833 0.00 0.00 0.00 2.34
5291 6235 4.216411 TGGTAATTGGACTCAGGTAAGC 57.784 45.455 0.00 0.00 0.00 3.09
5442 6389 7.446013 TCACCGGAAACTCAAAAATTACATAGT 59.554 33.333 9.46 0.00 0.00 2.12
5523 6471 2.145536 ACCTTGTAAAAACCGGCGTAG 58.854 47.619 6.01 0.00 0.00 3.51
5558 6506 2.666508 CGTTCGATTGACGTGAATCCTT 59.333 45.455 19.96 0.00 43.13 3.36
5596 6544 6.795399 CCAAACTTTGGCGACTAAATCATAT 58.205 36.000 7.63 0.00 45.17 1.78
5851 6800 3.672397 CCAAATCTATCTCACGCAGATCG 59.328 47.826 0.79 0.00 41.39 3.69
5958 6907 0.251341 AAGTCCCCACCAATGAGCAC 60.251 55.000 0.00 0.00 0.00 4.40
6022 6971 1.303309 ATCTGCGCTTGTATTCAGGC 58.697 50.000 9.73 0.00 42.13 4.85
6043 6992 3.887868 GCCGCCCCATAAACTGCG 61.888 66.667 0.00 0.00 46.14 5.18
6093 7044 7.550196 TCTTTATTTCGTAGCCGGAACTTAATT 59.450 33.333 5.05 0.00 33.54 1.40
6102 7053 7.638683 CGTAGCCGGAACTTAATTAAAGATTTG 59.361 37.037 5.05 0.00 38.67 2.32
6162 7184 6.647212 TGCTATTTTCTCATGTAACAGACG 57.353 37.500 0.00 0.00 0.00 4.18
6180 7202 3.004315 AGACGTGCGACAAAATTTTGGAT 59.996 39.130 29.37 13.70 42.34 3.41
6339 7361 2.882761 CCATGAGGTATGTGATTGCTGG 59.117 50.000 0.00 0.00 34.87 4.85
6349 7371 3.273434 TGTGATTGCTGGTCTGATTAGC 58.727 45.455 8.58 8.58 37.93 3.09
6515 7537 2.370519 TGATTTGAACCTGAAGACGGGA 59.629 45.455 0.00 0.00 44.87 5.14
6541 7564 5.326200 GCTAGAGGCTTAGTGTAGTTTCA 57.674 43.478 0.00 0.00 38.06 2.69
6542 7565 5.908341 GCTAGAGGCTTAGTGTAGTTTCAT 58.092 41.667 0.00 0.00 38.06 2.57
6543 7566 5.980715 GCTAGAGGCTTAGTGTAGTTTCATC 59.019 44.000 0.00 0.00 38.06 2.92
6544 7567 6.183360 GCTAGAGGCTTAGTGTAGTTTCATCT 60.183 42.308 0.00 0.00 38.06 2.90
6546 7569 7.010339 AGAGGCTTAGTGTAGTTTCATCTTT 57.990 36.000 0.00 0.00 0.00 2.52
6547 7570 8.135382 AGAGGCTTAGTGTAGTTTCATCTTTA 57.865 34.615 0.00 0.00 0.00 1.85
6548 7571 8.254508 AGAGGCTTAGTGTAGTTTCATCTTTAG 58.745 37.037 0.00 0.00 0.00 1.85
6549 7572 8.135382 AGGCTTAGTGTAGTTTCATCTTTAGA 57.865 34.615 0.00 0.00 0.00 2.10
6550 7573 8.254508 AGGCTTAGTGTAGTTTCATCTTTAGAG 58.745 37.037 0.00 0.00 0.00 2.43
6551 7574 8.251721 GGCTTAGTGTAGTTTCATCTTTAGAGA 58.748 37.037 0.00 0.00 36.09 3.10
6552 7575 9.810545 GCTTAGTGTAGTTTCATCTTTAGAGAT 57.189 33.333 0.00 0.00 43.43 2.75
6569 7592 8.873215 TTTAGAGATAATGTTTTCTAGAGGCG 57.127 34.615 0.00 0.00 0.00 5.52
6570 7593 5.848406 AGAGATAATGTTTTCTAGAGGCGG 58.152 41.667 0.00 0.00 0.00 6.13
6571 7594 4.381411 AGATAATGTTTTCTAGAGGCGGC 58.619 43.478 0.00 0.00 0.00 6.53
6572 7595 2.789409 AATGTTTTCTAGAGGCGGCT 57.211 45.000 13.09 13.09 0.00 5.52
6573 7596 2.317530 ATGTTTTCTAGAGGCGGCTC 57.682 50.000 30.15 30.15 0.00 4.70
6574 7597 0.108804 TGTTTTCTAGAGGCGGCTCG 60.109 55.000 30.50 18.95 0.00 5.03
6611 7634 3.388552 TCCTGTTAGAGATGGAGCTGA 57.611 47.619 0.00 0.00 0.00 4.26
6617 7640 2.363306 AGAGATGGAGCTGATCGACT 57.637 50.000 0.00 0.00 0.00 4.18
6619 7642 2.361757 AGAGATGGAGCTGATCGACTTG 59.638 50.000 0.00 0.00 0.00 3.16
6624 7647 1.674221 GGAGCTGATCGACTTGTGCTT 60.674 52.381 0.00 0.00 0.00 3.91
6631 7654 2.016704 CGACTTGTGCTTCGCGACT 61.017 57.895 9.15 0.00 0.00 4.18
6638 7661 2.883253 GCTTCGCGACTCCTGCTC 60.883 66.667 9.15 0.00 0.00 4.26
6652 7675 1.293924 CTGCTCGCCTATTCTTGGTG 58.706 55.000 0.00 0.00 36.49 4.17
6653 7676 0.744414 TGCTCGCCTATTCTTGGTGC 60.744 55.000 0.00 0.00 35.25 5.01
6655 7678 0.107703 CTCGCCTATTCTTGGTGCCA 60.108 55.000 0.00 0.00 35.25 4.92
6657 7680 1.705337 CGCCTATTCTTGGTGCCACG 61.705 60.000 0.00 0.00 0.00 4.94
6702 7725 0.036732 TACTGGCAGGTGCTTCCTTG 59.963 55.000 20.34 0.00 45.67 3.61
6709 7732 1.133809 AGGTGCTTCCTTGGGCAGTA 61.134 55.000 0.00 0.00 45.67 2.74
6730 7753 2.359169 CGGCCTACTTCCTGCCTGA 61.359 63.158 0.00 0.00 43.12 3.86
6755 7778 6.099845 ACTTCTGATAATGTAGGGGGTACTTG 59.900 42.308 0.00 0.00 32.19 3.16
6823 7846 6.455360 TGATGGTAAATGCTGGAAATCTTC 57.545 37.500 0.00 0.00 0.00 2.87
6824 7847 6.189859 TGATGGTAAATGCTGGAAATCTTCT 58.810 36.000 0.00 0.00 0.00 2.85
6825 7848 7.345691 TGATGGTAAATGCTGGAAATCTTCTA 58.654 34.615 0.00 0.00 0.00 2.10
6829 7852 7.769044 TGGTAAATGCTGGAAATCTTCTAGTAC 59.231 37.037 2.33 0.00 40.08 2.73
6867 7892 1.134438 GTCAAAGGAGTGGACCCCCT 61.134 60.000 0.00 0.00 0.00 4.79
6870 7895 1.140772 AAAGGAGTGGACCCCCTTCC 61.141 60.000 9.52 2.45 39.21 3.46
6875 7900 4.585216 TGGACCCCCTTCCACGGT 62.585 66.667 0.00 0.00 41.00 4.83
6891 7916 3.420482 GTGCCCCTGGTGCCCTAT 61.420 66.667 0.00 0.00 0.00 2.57
6892 7917 2.076184 GTGCCCCTGGTGCCCTATA 61.076 63.158 0.00 0.00 0.00 1.31
6893 7918 1.073008 TGCCCCTGGTGCCCTATAT 60.073 57.895 0.00 0.00 0.00 0.86
6894 7919 0.194842 TGCCCCTGGTGCCCTATATA 59.805 55.000 0.00 0.00 0.00 0.86
6895 7920 0.912486 GCCCCTGGTGCCCTATATAG 59.088 60.000 2.46 2.46 0.00 1.31
6897 7922 1.555765 CCCCTGGTGCCCTATATAGCT 60.556 57.143 4.04 0.00 0.00 3.32
6898 7923 1.834263 CCCTGGTGCCCTATATAGCTC 59.166 57.143 4.04 0.00 0.00 4.09
6919 7949 1.002868 AGACTCCATGCCAGTGTGC 60.003 57.895 0.47 0.00 0.00 4.57
6932 7962 0.935196 AGTGTGCGAGGACGTTTTTC 59.065 50.000 0.00 0.00 41.98 2.29
6984 8018 3.364889 TTCATAAGGATCGTAGCACCG 57.635 47.619 0.00 0.00 0.00 4.94
7014 8085 7.132805 TCCAGATATTTGGAGGAGAAACTCTA 58.867 38.462 10.89 0.00 42.24 2.43
7038 8109 4.994217 GCTATCCTAGAAAGTTCATGAGCC 59.006 45.833 5.87 0.00 0.00 4.70
7048 8119 5.796424 AAGTTCATGAGCCACTTGATTTT 57.204 34.783 9.89 0.00 33.71 1.82
7077 8148 9.813826 TCTCTATTACAATGATCCTAGATGACA 57.186 33.333 0.00 0.00 0.00 3.58
7082 8153 5.549347 ACAATGATCCTAGATGACATGAGC 58.451 41.667 0.00 0.00 0.00 4.26
7083 8154 5.307456 ACAATGATCCTAGATGACATGAGCT 59.693 40.000 0.00 0.00 0.00 4.09
7084 8155 6.496218 ACAATGATCCTAGATGACATGAGCTA 59.504 38.462 0.00 0.00 0.00 3.32
7085 8156 5.973899 TGATCCTAGATGACATGAGCTAC 57.026 43.478 0.00 0.00 0.00 3.58
7086 8157 5.639139 TGATCCTAGATGACATGAGCTACT 58.361 41.667 0.00 0.00 0.00 2.57
7087 8158 6.073981 TGATCCTAGATGACATGAGCTACTT 58.926 40.000 0.00 0.00 0.00 2.24
7088 8159 5.781210 TCCTAGATGACATGAGCTACTTG 57.219 43.478 0.00 0.00 0.00 3.16
7089 8160 5.449553 TCCTAGATGACATGAGCTACTTGA 58.550 41.667 0.00 0.00 0.00 3.02
7090 8161 6.073981 TCCTAGATGACATGAGCTACTTGAT 58.926 40.000 0.00 0.00 0.00 2.57
7091 8162 6.552725 TCCTAGATGACATGAGCTACTTGATT 59.447 38.462 0.00 0.00 0.00 2.57
7092 8163 7.070447 TCCTAGATGACATGAGCTACTTGATTT 59.930 37.037 0.00 0.00 0.00 2.17
7093 8164 7.384660 CCTAGATGACATGAGCTACTTGATTTC 59.615 40.741 0.00 0.00 0.00 2.17
7094 8165 6.887013 AGATGACATGAGCTACTTGATTTCT 58.113 36.000 0.00 0.00 0.00 2.52
7095 8166 7.337167 AGATGACATGAGCTACTTGATTTCTT 58.663 34.615 0.00 0.00 0.00 2.52
7096 8167 7.828223 AGATGACATGAGCTACTTGATTTCTTT 59.172 33.333 0.00 0.00 0.00 2.52
7097 8168 7.369803 TGACATGAGCTACTTGATTTCTTTC 57.630 36.000 0.00 0.00 0.00 2.62
7098 8169 7.164122 TGACATGAGCTACTTGATTTCTTTCT 58.836 34.615 0.00 0.00 0.00 2.52
7099 8170 7.332926 TGACATGAGCTACTTGATTTCTTTCTC 59.667 37.037 0.00 0.00 0.00 2.87
7100 8171 7.393216 ACATGAGCTACTTGATTTCTTTCTCT 58.607 34.615 0.00 0.00 0.00 3.10
7101 8172 8.535335 ACATGAGCTACTTGATTTCTTTCTCTA 58.465 33.333 0.00 0.00 0.00 2.43
7102 8173 9.376075 CATGAGCTACTTGATTTCTTTCTCTAA 57.624 33.333 0.00 0.00 0.00 2.10
7113 8184 7.334421 TGATTTCTTTCTCTAATACAGTGTGGC 59.666 37.037 5.88 0.00 0.00 5.01
7126 8197 1.134401 AGTGTGGCCGTTCATGGATAG 60.134 52.381 0.00 0.00 0.00 2.08
7132 8203 1.603172 GCCGTTCATGGATAGGAGTCG 60.603 57.143 2.90 0.00 0.00 4.18
7138 8220 0.111832 ATGGATAGGAGTCGGCGGTA 59.888 55.000 7.21 0.00 0.00 4.02
7150 8232 2.075338 TCGGCGGTAATGTTGGTTTAC 58.925 47.619 7.21 0.00 0.00 2.01
7152 8234 2.225963 CGGCGGTAATGTTGGTTTACAA 59.774 45.455 0.00 0.00 36.54 2.41
7154 8236 4.417506 GGCGGTAATGTTGGTTTACAATC 58.582 43.478 0.00 0.00 41.95 2.67
7156 8238 5.092781 GCGGTAATGTTGGTTTACAATCTG 58.907 41.667 0.00 0.00 41.95 2.90
7158 8240 6.128227 GCGGTAATGTTGGTTTACAATCTGTA 60.128 38.462 0.00 0.00 41.95 2.74
7160 8242 7.908082 CGGTAATGTTGGTTTACAATCTGTATG 59.092 37.037 0.00 0.00 41.95 2.39
7161 8243 8.188139 GGTAATGTTGGTTTACAATCTGTATGG 58.812 37.037 0.00 0.00 41.95 2.74
7163 8245 6.811253 TGTTGGTTTACAATCTGTATGGTC 57.189 37.500 0.00 0.00 41.95 4.02
7164 8246 5.708230 TGTTGGTTTACAATCTGTATGGTCC 59.292 40.000 0.00 0.00 41.95 4.46
7165 8247 5.772393 TGGTTTACAATCTGTATGGTCCT 57.228 39.130 0.00 0.00 32.20 3.85
7166 8248 6.134535 TGGTTTACAATCTGTATGGTCCTT 57.865 37.500 0.00 0.00 32.20 3.36
7167 8249 6.548321 TGGTTTACAATCTGTATGGTCCTTT 58.452 36.000 0.00 0.00 32.20 3.11
7168 8250 7.007723 TGGTTTACAATCTGTATGGTCCTTTT 58.992 34.615 0.00 0.00 32.20 2.27
7169 8251 7.175990 TGGTTTACAATCTGTATGGTCCTTTTC 59.824 37.037 0.00 0.00 32.20 2.29
7170 8252 7.393515 GGTTTACAATCTGTATGGTCCTTTTCT 59.606 37.037 0.00 0.00 32.20 2.52
7171 8253 8.451748 GTTTACAATCTGTATGGTCCTTTTCTC 58.548 37.037 0.00 0.00 32.20 2.87
7172 8254 6.380079 ACAATCTGTATGGTCCTTTTCTCT 57.620 37.500 0.00 0.00 0.00 3.10
7173 8255 7.496346 ACAATCTGTATGGTCCTTTTCTCTA 57.504 36.000 0.00 0.00 0.00 2.43
7174 8256 7.331791 ACAATCTGTATGGTCCTTTTCTCTAC 58.668 38.462 0.00 0.00 0.00 2.59
7175 8257 5.934402 TCTGTATGGTCCTTTTCTCTACC 57.066 43.478 0.00 0.00 0.00 3.18
7176 8258 5.338632 TCTGTATGGTCCTTTTCTCTACCA 58.661 41.667 0.00 0.00 45.58 3.25
7180 8262 4.553330 TGGTCCTTTTCTCTACCATGTC 57.447 45.455 0.00 0.00 37.09 3.06
7181 8263 3.907474 TGGTCCTTTTCTCTACCATGTCA 59.093 43.478 0.00 0.00 37.09 3.58
7188 8270 6.263168 CCTTTTCTCTACCATGTCAGTGTTTT 59.737 38.462 0.00 0.00 0.00 2.43
7200 8282 8.285394 CCATGTCAGTGTTTTCATATATGTAGC 58.715 37.037 12.42 5.33 0.00 3.58
7211 8293 6.765915 TCATATATGTAGCGCTCTCTTGAT 57.234 37.500 16.34 3.80 0.00 2.57
7212 8294 7.163001 TCATATATGTAGCGCTCTCTTGATT 57.837 36.000 16.34 0.00 0.00 2.57
7217 8299 3.928992 TGTAGCGCTCTCTTGATTGAAAG 59.071 43.478 16.34 0.00 0.00 2.62
7218 8300 3.051081 AGCGCTCTCTTGATTGAAAGT 57.949 42.857 2.64 0.00 0.00 2.66
7219 8301 2.999355 AGCGCTCTCTTGATTGAAAGTC 59.001 45.455 2.64 0.00 0.00 3.01
7220 8302 2.999355 GCGCTCTCTTGATTGAAAGTCT 59.001 45.455 0.00 0.00 0.00 3.24
7221 8303 3.061965 GCGCTCTCTTGATTGAAAGTCTC 59.938 47.826 0.00 0.00 0.00 3.36
7261 8347 3.482436 TCCTTGGGTTGATGTGTTGTAC 58.518 45.455 0.00 0.00 0.00 2.90
7262 8348 3.137544 TCCTTGGGTTGATGTGTTGTACT 59.862 43.478 0.00 0.00 0.00 2.73
7264 8350 4.023193 CCTTGGGTTGATGTGTTGTACTTC 60.023 45.833 0.00 0.00 34.84 3.01
7265 8351 3.482436 TGGGTTGATGTGTTGTACTTCC 58.518 45.455 0.00 0.00 33.68 3.46
7267 8353 3.751698 GGGTTGATGTGTTGTACTTCCTC 59.248 47.826 0.00 0.00 33.68 3.71
7270 8356 4.955811 TGATGTGTTGTACTTCCTCTGT 57.044 40.909 0.00 0.00 33.68 3.41
7271 8357 5.290493 TGATGTGTTGTACTTCCTCTGTT 57.710 39.130 0.00 0.00 33.68 3.16
7272 8358 5.680619 TGATGTGTTGTACTTCCTCTGTTT 58.319 37.500 0.00 0.00 33.68 2.83
7273 8359 5.758296 TGATGTGTTGTACTTCCTCTGTTTC 59.242 40.000 0.00 0.00 33.68 2.78
7274 8360 5.353394 TGTGTTGTACTTCCTCTGTTTCT 57.647 39.130 0.00 0.00 0.00 2.52
7275 8361 6.474140 TGTGTTGTACTTCCTCTGTTTCTA 57.526 37.500 0.00 0.00 0.00 2.10
7276 8362 6.880484 TGTGTTGTACTTCCTCTGTTTCTAA 58.120 36.000 0.00 0.00 0.00 2.10
7279 8365 9.485206 GTGTTGTACTTCCTCTGTTTCTAAATA 57.515 33.333 0.00 0.00 0.00 1.40
7280 8366 9.485206 TGTTGTACTTCCTCTGTTTCTAAATAC 57.515 33.333 0.00 0.00 0.00 1.89
7283 8369 9.706691 TGTACTTCCTCTGTTTCTAAATACAAG 57.293 33.333 0.00 0.00 0.00 3.16
7284 8370 9.708092 GTACTTCCTCTGTTTCTAAATACAAGT 57.292 33.333 0.00 0.00 0.00 3.16
7285 8371 8.834749 ACTTCCTCTGTTTCTAAATACAAGTC 57.165 34.615 0.00 0.00 0.00 3.01
7286 8372 8.652290 ACTTCCTCTGTTTCTAAATACAAGTCT 58.348 33.333 0.00 0.00 0.00 3.24
7287 8373 9.495572 CTTCCTCTGTTTCTAAATACAAGTCTT 57.504 33.333 0.00 0.00 0.00 3.01
7288 8374 9.847224 TTCCTCTGTTTCTAAATACAAGTCTTT 57.153 29.630 0.00 0.00 0.00 2.52
7365 8451 9.282569 AGAGTATAGATTCATTCATTTTGCTCC 57.717 33.333 0.00 0.00 0.00 4.70
7366 8452 8.092521 AGTATAGATTCATTCATTTTGCTCCG 57.907 34.615 0.00 0.00 0.00 4.63
7367 8453 6.949352 ATAGATTCATTCATTTTGCTCCGT 57.051 33.333 0.00 0.00 0.00 4.69
7368 8454 8.988934 GTATAGATTCATTCATTTTGCTCCGTA 58.011 33.333 0.00 0.00 0.00 4.02
7369 8455 6.949352 AGATTCATTCATTTTGCTCCGTAT 57.051 33.333 0.00 0.00 0.00 3.06
7370 8456 6.732154 AGATTCATTCATTTTGCTCCGTATG 58.268 36.000 0.00 0.00 0.00 2.39
7371 8457 5.895636 TTCATTCATTTTGCTCCGTATGT 57.104 34.783 0.00 0.00 0.00 2.29
7372 8458 6.993786 TTCATTCATTTTGCTCCGTATGTA 57.006 33.333 0.00 0.00 0.00 2.29
7373 8459 6.603237 TCATTCATTTTGCTCCGTATGTAG 57.397 37.500 0.00 0.00 0.00 2.74
7374 8460 6.112734 TCATTCATTTTGCTCCGTATGTAGT 58.887 36.000 0.00 0.00 0.00 2.73
7375 8461 6.257849 TCATTCATTTTGCTCCGTATGTAGTC 59.742 38.462 0.00 0.00 0.00 2.59
7376 8462 5.339008 TCATTTTGCTCCGTATGTAGTCT 57.661 39.130 0.00 0.00 0.00 3.24
7377 8463 5.730550 TCATTTTGCTCCGTATGTAGTCTT 58.269 37.500 0.00 0.00 0.00 3.01
7378 8464 6.170506 TCATTTTGCTCCGTATGTAGTCTTT 58.829 36.000 0.00 0.00 0.00 2.52
7379 8465 6.653320 TCATTTTGCTCCGTATGTAGTCTTTT 59.347 34.615 0.00 0.00 0.00 2.27
7380 8466 7.820386 TCATTTTGCTCCGTATGTAGTCTTTTA 59.180 33.333 0.00 0.00 0.00 1.52
7381 8467 8.612619 CATTTTGCTCCGTATGTAGTCTTTTAT 58.387 33.333 0.00 0.00 0.00 1.40
7382 8468 8.556213 TTTTGCTCCGTATGTAGTCTTTTATT 57.444 30.769 0.00 0.00 0.00 1.40
7383 8469 7.534085 TTGCTCCGTATGTAGTCTTTTATTG 57.466 36.000 0.00 0.00 0.00 1.90
7384 8470 6.869695 TGCTCCGTATGTAGTCTTTTATTGA 58.130 36.000 0.00 0.00 0.00 2.57
7385 8471 7.324935 TGCTCCGTATGTAGTCTTTTATTGAA 58.675 34.615 0.00 0.00 0.00 2.69
7386 8472 7.820386 TGCTCCGTATGTAGTCTTTTATTGAAA 59.180 33.333 0.00 0.00 0.00 2.69
7387 8473 8.827677 GCTCCGTATGTAGTCTTTTATTGAAAT 58.172 33.333 0.00 0.00 0.00 2.17
7419 8505 8.986929 AAAGACTTATATTTGAGAATGGAGGG 57.013 34.615 0.00 0.00 0.00 4.30
7420 8506 7.937700 AGACTTATATTTGAGAATGGAGGGA 57.062 36.000 0.00 0.00 0.00 4.20
7421 8507 7.972301 AGACTTATATTTGAGAATGGAGGGAG 58.028 38.462 0.00 0.00 0.00 4.30
7422 8508 7.570607 AGACTTATATTTGAGAATGGAGGGAGT 59.429 37.037 0.00 0.00 0.00 3.85
7423 8509 8.798975 ACTTATATTTGAGAATGGAGGGAGTA 57.201 34.615 0.00 0.00 0.00 2.59
7424 8510 8.652290 ACTTATATTTGAGAATGGAGGGAGTAC 58.348 37.037 0.00 0.00 0.00 2.73
7425 8511 8.798975 TTATATTTGAGAATGGAGGGAGTACT 57.201 34.615 0.00 0.00 0.00 2.73
7426 8512 9.892444 TTATATTTGAGAATGGAGGGAGTACTA 57.108 33.333 0.00 0.00 0.00 1.82
7427 8513 6.739331 ATTTGAGAATGGAGGGAGTACTAG 57.261 41.667 0.00 0.00 0.00 2.57
7428 8514 4.186077 TGAGAATGGAGGGAGTACTAGG 57.814 50.000 0.00 0.00 0.00 3.02
7429 8515 3.532232 TGAGAATGGAGGGAGTACTAGGT 59.468 47.826 0.00 0.00 0.00 3.08
7430 8516 4.730392 TGAGAATGGAGGGAGTACTAGGTA 59.270 45.833 0.00 0.00 0.00 3.08
7431 8517 5.195146 TGAGAATGGAGGGAGTACTAGGTAA 59.805 44.000 0.00 0.00 0.00 2.85
7432 8518 6.125860 TGAGAATGGAGGGAGTACTAGGTAAT 60.126 42.308 0.00 0.00 0.00 1.89
7433 8519 6.694611 AGAATGGAGGGAGTACTAGGTAATT 58.305 40.000 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 7.852454 GTGCAAACAAATCTTGAGGAAAAATTC 59.148 33.333 0.00 0.00 0.00 2.17
9 10 7.553760 AGTGCAAACAAATCTTGAGGAAAAATT 59.446 29.630 0.00 0.00 0.00 1.82
10 11 7.049754 AGTGCAAACAAATCTTGAGGAAAAAT 58.950 30.769 0.00 0.00 0.00 1.82
26 28 8.715191 ATTTTATTTCAAACAGAGTGCAAACA 57.285 26.923 0.00 0.00 0.00 2.83
54 56 2.986019 TGGAGGAAGTTTGAGGGATTGA 59.014 45.455 0.00 0.00 0.00 2.57
58 60 1.916181 GGATGGAGGAAGTTTGAGGGA 59.084 52.381 0.00 0.00 0.00 4.20
61 63 5.990120 AATTTGGATGGAGGAAGTTTGAG 57.010 39.130 0.00 0.00 0.00 3.02
68 70 7.705912 TCCTATAGAAATTTGGATGGAGGAA 57.294 36.000 0.00 0.00 0.00 3.36
140 144 3.502211 TCGGCTTTTCAAAGGATTCTCAC 59.498 43.478 1.55 0.00 36.53 3.51
156 160 6.543831 ACATTGATCTAGCTAAAAATCGGCTT 59.456 34.615 0.00 0.00 37.50 4.35
158 162 6.305693 ACATTGATCTAGCTAAAAATCGGC 57.694 37.500 0.00 0.00 0.00 5.54
159 163 7.355778 GGAACATTGATCTAGCTAAAAATCGG 58.644 38.462 0.00 0.00 0.00 4.18
161 165 7.355778 CGGGAACATTGATCTAGCTAAAAATC 58.644 38.462 0.00 0.00 0.00 2.17
185 192 0.111178 CAAAATTTGCTGCAACGCCG 60.111 50.000 15.72 0.00 0.00 6.46
221 228 2.009051 CGTAGCATGCATGAACTCCAA 58.991 47.619 30.64 1.16 0.00 3.53
273 280 2.897350 GCACCGGCCTCTGCATAC 60.897 66.667 14.92 0.00 40.13 2.39
274 281 3.398310 TGCACCGGCCTCTGCATA 61.398 61.111 17.80 0.00 38.49 3.14
275 282 4.119363 ATGCACCGGCCTCTGCAT 62.119 61.111 24.36 24.36 46.70 3.96
277 284 2.947938 ATACATGCACCGGCCTCTGC 62.948 60.000 13.33 13.33 40.13 4.26
278 285 1.146930 ATACATGCACCGGCCTCTG 59.853 57.895 0.00 0.00 40.13 3.35
279 286 1.146930 CATACATGCACCGGCCTCT 59.853 57.895 0.00 0.00 40.13 3.69
280 287 3.736483 CATACATGCACCGGCCTC 58.264 61.111 0.00 0.00 40.13 4.70
290 297 0.602106 CCTCCGCCTCTGCATACATG 60.602 60.000 0.00 0.00 37.32 3.21
291 298 1.750930 CCTCCGCCTCTGCATACAT 59.249 57.895 0.00 0.00 37.32 2.29
292 299 3.094062 GCCTCCGCCTCTGCATACA 62.094 63.158 0.00 0.00 37.32 2.29
293 300 2.280457 GCCTCCGCCTCTGCATAC 60.280 66.667 0.00 0.00 37.32 2.39
294 301 2.763710 TGCCTCCGCCTCTGCATA 60.764 61.111 0.00 0.00 37.32 3.14
295 302 4.172512 CTGCCTCCGCCTCTGCAT 62.173 66.667 0.00 0.00 37.32 3.96
297 304 3.612247 TTTCTGCCTCCGCCTCTGC 62.612 63.158 0.00 0.00 0.00 4.26
298 305 1.743252 GTTTCTGCCTCCGCCTCTG 60.743 63.158 0.00 0.00 0.00 3.35
299 306 1.484444 AAGTTTCTGCCTCCGCCTCT 61.484 55.000 0.00 0.00 0.00 3.69
300 307 0.606673 AAAGTTTCTGCCTCCGCCTC 60.607 55.000 0.00 0.00 0.00 4.70
301 308 0.890996 CAAAGTTTCTGCCTCCGCCT 60.891 55.000 0.00 0.00 0.00 5.52
302 309 1.581447 CAAAGTTTCTGCCTCCGCC 59.419 57.895 0.00 0.00 0.00 6.13
303 310 0.889186 TCCAAAGTTTCTGCCTCCGC 60.889 55.000 0.00 0.00 0.00 5.54
304 311 1.826385 ATCCAAAGTTTCTGCCTCCG 58.174 50.000 0.00 0.00 0.00 4.63
305 312 3.696548 CCTAATCCAAAGTTTCTGCCTCC 59.303 47.826 0.00 0.00 0.00 4.30
306 313 3.696548 CCCTAATCCAAAGTTTCTGCCTC 59.303 47.826 0.00 0.00 0.00 4.70
307 314 3.564352 CCCCTAATCCAAAGTTTCTGCCT 60.564 47.826 0.00 0.00 0.00 4.75
308 315 2.760650 CCCCTAATCCAAAGTTTCTGCC 59.239 50.000 0.00 0.00 0.00 4.85
309 316 2.760650 CCCCCTAATCCAAAGTTTCTGC 59.239 50.000 0.00 0.00 0.00 4.26
327 334 3.021695 GTTTTAGTATCACTTGGCCCCC 58.978 50.000 0.00 0.00 0.00 5.40
328 335 3.692690 TGTTTTAGTATCACTTGGCCCC 58.307 45.455 0.00 0.00 0.00 5.80
329 336 3.694566 CCTGTTTTAGTATCACTTGGCCC 59.305 47.826 0.00 0.00 0.00 5.80
330 337 4.332828 ACCTGTTTTAGTATCACTTGGCC 58.667 43.478 0.00 0.00 0.00 5.36
331 338 5.335661 CCAACCTGTTTTAGTATCACTTGGC 60.336 44.000 0.00 0.00 0.00 4.52
332 339 5.183140 CCCAACCTGTTTTAGTATCACTTGG 59.817 44.000 0.00 0.00 0.00 3.61
333 340 5.183140 CCCCAACCTGTTTTAGTATCACTTG 59.817 44.000 0.00 0.00 0.00 3.16
334 341 5.073965 TCCCCAACCTGTTTTAGTATCACTT 59.926 40.000 0.00 0.00 0.00 3.16
335 342 4.600111 TCCCCAACCTGTTTTAGTATCACT 59.400 41.667 0.00 0.00 0.00 3.41
336 343 4.913784 TCCCCAACCTGTTTTAGTATCAC 58.086 43.478 0.00 0.00 0.00 3.06
337 344 4.018779 CCTCCCCAACCTGTTTTAGTATCA 60.019 45.833 0.00 0.00 0.00 2.15
338 345 4.524053 CCTCCCCAACCTGTTTTAGTATC 58.476 47.826 0.00 0.00 0.00 2.24
339 346 3.268595 CCCTCCCCAACCTGTTTTAGTAT 59.731 47.826 0.00 0.00 0.00 2.12
340 347 2.645797 CCCTCCCCAACCTGTTTTAGTA 59.354 50.000 0.00 0.00 0.00 1.82
341 348 1.427753 CCCTCCCCAACCTGTTTTAGT 59.572 52.381 0.00 0.00 0.00 2.24
342 349 1.891011 GCCCTCCCCAACCTGTTTTAG 60.891 57.143 0.00 0.00 0.00 1.85
343 350 0.113580 GCCCTCCCCAACCTGTTTTA 59.886 55.000 0.00 0.00 0.00 1.52
344 351 1.152333 GCCCTCCCCAACCTGTTTT 60.152 57.895 0.00 0.00 0.00 2.43
345 352 2.526110 GCCCTCCCCAACCTGTTT 59.474 61.111 0.00 0.00 0.00 2.83
346 353 3.590574 GGCCCTCCCCAACCTGTT 61.591 66.667 0.00 0.00 0.00 3.16
347 354 4.938756 TGGCCCTCCCCAACCTGT 62.939 66.667 0.00 0.00 30.32 4.00
348 355 2.460476 ATTTGGCCCTCCCCAACCTG 62.460 60.000 0.00 0.00 44.17 4.00
349 356 2.168272 GATTTGGCCCTCCCCAACCT 62.168 60.000 0.00 0.00 44.17 3.50
350 357 1.685765 GATTTGGCCCTCCCCAACC 60.686 63.158 0.00 0.00 44.17 3.77
351 358 0.252239 AAGATTTGGCCCTCCCCAAC 60.252 55.000 0.00 0.00 44.17 3.77
352 359 1.287739 CTAAGATTTGGCCCTCCCCAA 59.712 52.381 0.00 0.00 42.87 4.12
353 360 0.926293 CTAAGATTTGGCCCTCCCCA 59.074 55.000 0.00 0.00 0.00 4.96
354 361 1.222567 TCTAAGATTTGGCCCTCCCC 58.777 55.000 0.00 0.00 0.00 4.81
355 362 3.382083 TTTCTAAGATTTGGCCCTCCC 57.618 47.619 0.00 0.00 0.00 4.30
356 363 4.344978 ACTTTTCTAAGATTTGGCCCTCC 58.655 43.478 0.00 0.00 35.30 4.30
357 364 6.415573 TCTACTTTTCTAAGATTTGGCCCTC 58.584 40.000 0.00 0.00 35.30 4.30
358 365 6.388619 TCTACTTTTCTAAGATTTGGCCCT 57.611 37.500 0.00 0.00 35.30 5.19
359 366 6.460261 GCATCTACTTTTCTAAGATTTGGCCC 60.460 42.308 0.00 0.00 35.30 5.80
360 367 6.319911 AGCATCTACTTTTCTAAGATTTGGCC 59.680 38.462 0.00 0.00 35.30 5.36
361 368 7.326968 AGCATCTACTTTTCTAAGATTTGGC 57.673 36.000 0.00 0.00 35.30 4.52
403 410 9.836864 AAATTACTGATGAATAGTGTAGCATCA 57.163 29.630 0.00 0.00 43.29 3.07
416 423 8.440059 CGTTGTTGCTACTAAATTACTGATGAA 58.560 33.333 0.00 0.00 0.00 2.57
417 424 7.601130 ACGTTGTTGCTACTAAATTACTGATGA 59.399 33.333 0.00 0.00 0.00 2.92
418 425 7.688167 CACGTTGTTGCTACTAAATTACTGATG 59.312 37.037 0.00 0.00 0.00 3.07
419 426 7.601130 TCACGTTGTTGCTACTAAATTACTGAT 59.399 33.333 0.00 0.00 0.00 2.90
420 427 6.924612 TCACGTTGTTGCTACTAAATTACTGA 59.075 34.615 0.00 0.00 0.00 3.41
421 428 7.112528 TCACGTTGTTGCTACTAAATTACTG 57.887 36.000 0.00 0.00 0.00 2.74
422 429 7.386848 ACATCACGTTGTTGCTACTAAATTACT 59.613 33.333 0.00 0.00 0.00 2.24
423 430 7.515643 ACATCACGTTGTTGCTACTAAATTAC 58.484 34.615 0.00 0.00 0.00 1.89
424 431 7.661127 ACATCACGTTGTTGCTACTAAATTA 57.339 32.000 0.00 0.00 0.00 1.40
425 432 6.554334 ACATCACGTTGTTGCTACTAAATT 57.446 33.333 0.00 0.00 0.00 1.82
426 433 6.554334 AACATCACGTTGTTGCTACTAAAT 57.446 33.333 4.85 0.00 38.37 1.40
427 434 5.994887 AACATCACGTTGTTGCTACTAAA 57.005 34.783 4.85 0.00 38.37 1.85
428 435 5.636121 CCTAACATCACGTTGTTGCTACTAA 59.364 40.000 14.42 0.00 40.00 2.24
429 436 5.165676 CCTAACATCACGTTGTTGCTACTA 58.834 41.667 14.42 0.00 40.00 1.82
430 437 3.994392 CCTAACATCACGTTGTTGCTACT 59.006 43.478 14.42 0.00 40.00 2.57
431 438 3.124636 CCCTAACATCACGTTGTTGCTAC 59.875 47.826 14.42 0.00 40.00 3.58
432 439 3.331150 CCCTAACATCACGTTGTTGCTA 58.669 45.455 14.42 0.00 40.00 3.49
433 440 2.151202 CCCTAACATCACGTTGTTGCT 58.849 47.619 14.42 0.00 40.00 3.91
434 441 1.199097 CCCCTAACATCACGTTGTTGC 59.801 52.381 14.42 0.00 40.00 4.17
435 442 1.810151 CCCCCTAACATCACGTTGTTG 59.190 52.381 14.42 2.20 40.00 3.33
436 443 2.194201 CCCCCTAACATCACGTTGTT 57.806 50.000 10.28 10.28 42.31 2.83
437 444 3.948735 CCCCCTAACATCACGTTGT 57.051 52.632 0.00 0.00 38.63 3.32
472 479 4.729918 GACAGGGGGTGCCAGCAG 62.730 72.222 0.00 0.00 0.00 4.24
474 481 4.416738 GAGACAGGGGGTGCCAGC 62.417 72.222 0.00 0.00 0.00 4.85
475 482 3.721706 GGAGACAGGGGGTGCCAG 61.722 72.222 0.00 0.00 0.00 4.85
492 499 1.529865 CATCATACATCTGCAGTGGCG 59.470 52.381 14.67 3.33 45.35 5.69
493 500 2.842457 TCATCATACATCTGCAGTGGC 58.158 47.619 14.67 0.00 41.68 5.01
494 501 5.529800 TGAATTCATCATACATCTGCAGTGG 59.470 40.000 14.67 9.65 31.50 4.00
495 502 6.613755 TGAATTCATCATACATCTGCAGTG 57.386 37.500 14.67 13.55 31.50 3.66
565 572 7.054124 TCCCTCCAATCCATATTAATTATCGC 58.946 38.462 0.00 0.00 0.00 4.58
566 573 8.267894 ACTCCCTCCAATCCATATTAATTATCG 58.732 37.037 0.00 0.00 0.00 2.92
583 590 7.402071 ACTGTTTGAGTTATATTACTCCCTCCA 59.598 37.037 17.00 8.98 43.11 3.86
701 711 6.793349 AGATGCTTGCTATCTTTGTGAAATC 58.207 36.000 0.00 0.00 30.98 2.17
892 908 4.096003 GCAAGGAGCCCCGCTACA 62.096 66.667 0.00 0.00 42.99 2.74
910 926 2.529389 ATAGGGACCATCCGCCCC 60.529 66.667 0.00 0.00 45.89 5.80
911 927 1.536662 AGATAGGGACCATCCGCCC 60.537 63.158 0.00 0.00 45.04 6.13
912 928 0.543174 AGAGATAGGGACCATCCGCC 60.543 60.000 0.00 0.00 37.43 6.13
913 929 0.892063 GAGAGATAGGGACCATCCGC 59.108 60.000 0.00 0.00 37.43 5.54
914 930 1.169577 CGAGAGATAGGGACCATCCG 58.830 60.000 0.00 0.00 37.43 4.18
915 931 0.892063 GCGAGAGATAGGGACCATCC 59.108 60.000 0.00 0.00 35.23 3.51
916 932 1.621992 TGCGAGAGATAGGGACCATC 58.378 55.000 0.00 0.00 0.00 3.51
917 933 1.967066 CTTGCGAGAGATAGGGACCAT 59.033 52.381 0.00 0.00 0.00 3.55
918 934 1.063942 TCTTGCGAGAGATAGGGACCA 60.064 52.381 0.00 0.00 0.00 4.02
919 935 1.693627 TCTTGCGAGAGATAGGGACC 58.306 55.000 0.00 0.00 0.00 4.46
920 936 2.544903 GCTTCTTGCGAGAGATAGGGAC 60.545 54.545 3.32 0.00 32.44 4.46
921 937 1.683917 GCTTCTTGCGAGAGATAGGGA 59.316 52.381 3.32 0.00 32.44 4.20
922 938 2.147436 GCTTCTTGCGAGAGATAGGG 57.853 55.000 3.32 0.00 32.44 3.53
933 949 2.478831 CTCCTATTCTCCGCTTCTTGC 58.521 52.381 0.00 0.00 38.57 4.01
938 954 1.043673 ACCGCTCCTATTCTCCGCTT 61.044 55.000 0.00 0.00 0.00 4.68
969 990 2.358322 TGGACTTGGGAAAACAGTCC 57.642 50.000 10.16 10.16 46.61 3.85
1044 1065 2.545946 GAGAAAGCGGAAGTGATATGGC 59.454 50.000 0.00 0.00 0.00 4.40
1048 1069 2.093658 GGTGGAGAAAGCGGAAGTGATA 60.094 50.000 0.00 0.00 0.00 2.15
1155 1176 0.759436 CTGGGTACTGCCTCGGGTAT 60.759 60.000 0.00 0.00 37.43 2.73
1253 1277 2.543777 TCCGTCAGCCCTATTATTGC 57.456 50.000 0.00 0.00 0.00 3.56
1273 1297 1.075525 ATTCATCGTCCTCCCCGGA 60.076 57.895 0.73 0.00 40.30 5.14
1295 1319 1.051556 GTCCTCCACCTCATCCTCCC 61.052 65.000 0.00 0.00 0.00 4.30
1302 1326 1.802337 CGTCGTTGTCCTCCACCTCA 61.802 60.000 0.00 0.00 0.00 3.86
1323 1347 0.460284 CGTTTCCCTCCTCGTCCATG 60.460 60.000 0.00 0.00 0.00 3.66
1338 1362 1.684983 TCCTCCTTCACTTCGTCGTTT 59.315 47.619 0.00 0.00 0.00 3.60
1350 1374 0.105709 CCTCCTCCTCCTCCTCCTTC 60.106 65.000 0.00 0.00 0.00 3.46
1351 1375 0.556380 TCCTCCTCCTCCTCCTCCTT 60.556 60.000 0.00 0.00 0.00 3.36
1352 1376 0.998945 CTCCTCCTCCTCCTCCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
1354 1378 0.996762 TCCTCCTCCTCCTCCTCCTC 60.997 65.000 0.00 0.00 0.00 3.71
1356 1380 1.541672 CTCCTCCTCCTCCTCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
1357 1381 0.996762 TCCTCCTCCTCCTCCTCCTC 60.997 65.000 0.00 0.00 0.00 3.71
1358 1382 0.998945 CTCCTCCTCCTCCTCCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
1359 1383 1.541672 CTCCTCCTCCTCCTCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
1360 1384 0.996762 TCCTCCTCCTCCTCCTCCTC 60.997 65.000 0.00 0.00 0.00 3.71
1361 1385 0.998945 CTCCTCCTCCTCCTCCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
1362 1386 1.541672 CTCCTCCTCCTCCTCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
1363 1387 0.996762 TCCTCCTCCTCCTCCTCCTC 60.997 65.000 0.00 0.00 0.00 3.71
1364 1388 1.087725 TCCTCCTCCTCCTCCTCCT 59.912 63.158 0.00 0.00 0.00 3.69
1365 1389 1.231928 GTCCTCCTCCTCCTCCTCC 59.768 68.421 0.00 0.00 0.00 4.30
1366 1390 0.336737 TTGTCCTCCTCCTCCTCCTC 59.663 60.000 0.00 0.00 0.00 3.71
1367 1391 0.041982 GTTGTCCTCCTCCTCCTCCT 59.958 60.000 0.00 0.00 0.00 3.69
1467 1491 2.574018 CCCGGCTATGATCCGCTCA 61.574 63.158 0.00 0.00 45.19 4.26
1488 1512 2.669229 TCACAGGCGACGTCCGTA 60.669 61.111 10.58 0.00 41.15 4.02
1536 1560 5.585390 CAGCAATTGACAAGAACAAGAACT 58.415 37.500 10.34 0.00 0.00 3.01
1571 1595 6.680810 TGGAAAAGAACATCTGCACTAATTG 58.319 36.000 0.00 0.00 0.00 2.32
1595 1619 0.463295 CAGGATCACATTGCCGCTCT 60.463 55.000 0.00 0.00 0.00 4.09
1635 1659 0.257616 GCCCACTACAAGCCCCATTA 59.742 55.000 0.00 0.00 0.00 1.90
1637 1661 2.683475 GCCCACTACAAGCCCCAT 59.317 61.111 0.00 0.00 0.00 4.00
1642 1666 1.586154 AACATGCGCCCACTACAAGC 61.586 55.000 4.18 0.00 0.00 4.01
1692 1771 5.685520 AGCAAGGGAAACAAAACCTTTTA 57.314 34.783 0.00 0.00 42.46 1.52
1970 2067 7.019388 ACTTAGATATAGCTCCTCCAATGGAA 58.981 38.462 2.61 0.00 35.43 3.53
2050 2217 2.487532 GCATGCCCTCATCAGCACC 61.488 63.158 6.36 0.00 42.84 5.01
2310 2478 8.966868 GGATCCAAGATTTGACCATTACTAAAA 58.033 33.333 6.95 0.00 0.00 1.52
2373 2541 8.812513 TGACTTCAAATGAGTATGGATGATTT 57.187 30.769 0.00 0.00 0.00 2.17
2442 2610 2.644299 ACTTCTGGTGGTTGATGGATGA 59.356 45.455 0.00 0.00 0.00 2.92
2711 2901 1.754803 CCTAACCGTCTAGGATGCACA 59.245 52.381 0.00 0.00 45.00 4.57
2712 2902 2.029623 TCCTAACCGTCTAGGATGCAC 58.970 52.381 5.80 0.00 42.14 4.57
2713 2903 2.307768 CTCCTAACCGTCTAGGATGCA 58.692 52.381 9.53 0.00 45.18 3.96
2755 2945 0.320247 CCATCTCCGAGCCATGTAGC 60.320 60.000 0.00 0.00 0.00 3.58
2803 3016 3.660970 TGGATTGCACCAATAAGCCTA 57.339 42.857 0.00 0.00 36.96 3.93
2886 3099 0.736325 CTCACTTTACAGGTCCGCGG 60.736 60.000 22.12 22.12 0.00 6.46
3456 3738 1.068753 CGCTCCGCCTGATGAAGAT 59.931 57.895 0.00 0.00 0.00 2.40
3491 3774 0.331278 TCATGCCGGTGAAAAGGGAT 59.669 50.000 1.90 0.00 39.22 3.85
3520 3807 3.322466 CCGGTGGGTTGAGCTCCT 61.322 66.667 12.15 0.00 0.00 3.69
3599 3917 2.407428 CGTAGCTGTCGCTCCTCCA 61.407 63.158 0.00 0.00 45.15 3.86
3666 3984 1.135939 CGGTGCGTCATAGTCGACA 59.864 57.895 19.50 4.13 35.54 4.35
3720 4039 4.899239 GGATGTGGAGCTCGGGCG 62.899 72.222 7.83 0.00 44.37 6.13
3848 4179 1.947597 ATAACTACGGGTTCGCGGCA 61.948 55.000 6.13 0.00 40.63 5.69
3889 4255 0.674534 CCAGACCAGAGCCCGTATAC 59.325 60.000 0.00 0.00 0.00 1.47
4004 4371 4.403734 GTTTTAGGATCACAAGGAACCCA 58.596 43.478 0.00 0.00 39.20 4.51
4031 4398 0.721718 GTTGATGGAGGCTTCGAACG 59.278 55.000 0.00 0.00 0.00 3.95
4087 4454 4.688879 ACTCTTGACGCGATCATGTTTTTA 59.311 37.500 15.93 0.00 37.11 1.52
4154 4523 8.209917 AGAATATTAACCAGCGGAAAGTAAAG 57.790 34.615 1.50 0.00 0.00 1.85
4367 5011 8.593945 AGATGTTTCTTGAAGGCCATTATTAA 57.406 30.769 5.01 0.00 0.00 1.40
4663 5604 8.462016 CCCTCCAGTTGTATGAGAAAAATAAAG 58.538 37.037 0.00 0.00 0.00 1.85
4898 5841 0.322187 AATATATTGGCCCCGGCGTC 60.322 55.000 6.01 0.00 43.06 5.19
4900 5843 1.663695 CTAATATATTGGCCCCGGCG 58.336 55.000 8.28 0.00 43.06 6.46
4929 5872 6.151480 GGAATAGATACTCTGCAGTACTACCC 59.849 46.154 14.67 11.27 37.97 3.69
4931 5874 7.094549 CCAGGAATAGATACTCTGCAGTACTAC 60.095 44.444 14.67 4.38 37.97 2.73
5019 5962 3.118075 TCCCATCACAACTTGTCTGACAA 60.118 43.478 20.95 20.95 36.54 3.18
5023 5966 2.810274 CAGTCCCATCACAACTTGTCTG 59.190 50.000 0.00 0.00 0.00 3.51
5056 5999 9.573166 TCATTCTATATCAACCAAACTTATGGG 57.427 33.333 0.00 0.00 45.18 4.00
5100 6043 6.536582 ACACTGCAACTATCTCATGATTGTAC 59.463 38.462 0.00 0.00 37.60 2.90
5177 6120 4.032960 TGCACAGAACATACATTTCCCT 57.967 40.909 0.00 0.00 0.00 4.20
5211 6154 1.464734 TGTGAAGACGGTTTTTGGCA 58.535 45.000 0.00 0.00 0.00 4.92
5212 6155 2.570442 TTGTGAAGACGGTTTTTGGC 57.430 45.000 0.00 0.00 0.00 4.52
5290 6234 1.865340 GTATACTAGGCCAAACAGCGC 59.135 52.381 5.01 0.00 0.00 5.92
5291 6235 3.123804 CAGTATACTAGGCCAAACAGCG 58.876 50.000 5.01 0.00 0.00 5.18
5442 6389 7.046652 GTCAGAGGTGTACACAGTATACTAGA 58.953 42.308 26.51 11.73 0.00 2.43
5523 6471 1.052287 CGAACGTTGGCAATTCAAGC 58.948 50.000 5.00 0.00 0.00 4.01
5596 6544 0.472471 GGCTGAATCGGGATGGGTTA 59.528 55.000 0.00 0.00 0.00 2.85
5851 6800 6.662414 TTCAACGTGGTCATTGATAATCTC 57.338 37.500 0.00 0.00 34.87 2.75
5958 6907 2.642807 TGTAAGAAGGAAACCCTCCCAG 59.357 50.000 0.00 0.00 46.81 4.45
6006 6955 0.321564 ACAGCCTGAATACAAGCGCA 60.322 50.000 11.47 0.00 38.37 6.09
6022 6971 1.378514 AGTTTATGGGGCGGCACAG 60.379 57.895 21.87 0.00 0.00 3.66
6043 6992 5.420104 AGATGGTTTTGAATGGATCCTTGTC 59.580 40.000 14.23 8.04 0.00 3.18
6093 7044 6.106003 TCGAAGACAGCATAGCAAATCTTTA 58.894 36.000 0.00 0.00 30.46 1.85
6102 7053 3.303001 GCTTTCATCGAAGACAGCATAGC 60.303 47.826 20.53 6.23 42.51 2.97
6162 7184 2.736192 CCCATCCAAAATTTTGTCGCAC 59.264 45.455 25.25 0.00 36.45 5.34
6180 7202 1.661463 AGAACTCCAGCAATCTCCCA 58.339 50.000 0.00 0.00 0.00 4.37
6339 7361 2.113289 GAAGAGACGCGCTAATCAGAC 58.887 52.381 5.73 0.00 0.00 3.51
6363 7385 2.740055 CGAGACCAGTGCTGCACC 60.740 66.667 27.74 13.35 34.49 5.01
6543 7566 8.973378 CGCCTCTAGAAAACATTATCTCTAAAG 58.027 37.037 0.00 0.00 0.00 1.85
6544 7567 7.926555 CCGCCTCTAGAAAACATTATCTCTAAA 59.073 37.037 0.00 0.00 0.00 1.85
6546 7569 6.516860 GCCGCCTCTAGAAAACATTATCTCTA 60.517 42.308 0.00 0.00 0.00 2.43
6547 7570 5.740513 GCCGCCTCTAGAAAACATTATCTCT 60.741 44.000 0.00 0.00 0.00 3.10
6548 7571 4.449405 GCCGCCTCTAGAAAACATTATCTC 59.551 45.833 0.00 0.00 0.00 2.75
6549 7572 4.101741 AGCCGCCTCTAGAAAACATTATCT 59.898 41.667 0.00 0.00 0.00 1.98
6550 7573 4.381411 AGCCGCCTCTAGAAAACATTATC 58.619 43.478 0.00 0.00 0.00 1.75
6551 7574 4.381411 GAGCCGCCTCTAGAAAACATTAT 58.619 43.478 0.00 0.00 35.16 1.28
6552 7575 3.737047 CGAGCCGCCTCTAGAAAACATTA 60.737 47.826 0.00 0.00 35.90 1.90
6553 7576 2.633488 GAGCCGCCTCTAGAAAACATT 58.367 47.619 0.00 0.00 35.16 2.71
6554 7577 1.471676 CGAGCCGCCTCTAGAAAACAT 60.472 52.381 0.00 0.00 35.90 2.71
6555 7578 0.108804 CGAGCCGCCTCTAGAAAACA 60.109 55.000 0.00 0.00 35.90 2.83
6556 7579 0.806492 CCGAGCCGCCTCTAGAAAAC 60.806 60.000 0.00 0.00 35.90 2.43
6557 7580 1.515954 CCGAGCCGCCTCTAGAAAA 59.484 57.895 0.00 0.00 35.90 2.29
6558 7581 3.077519 GCCGAGCCGCCTCTAGAAA 62.078 63.158 0.00 0.00 35.90 2.52
6559 7582 3.528370 GCCGAGCCGCCTCTAGAA 61.528 66.667 0.00 0.00 35.90 2.10
6570 7593 0.394565 AAGACATCTATGGGCCGAGC 59.605 55.000 0.00 0.00 0.00 5.03
6571 7594 2.918712 AAAGACATCTATGGGCCGAG 57.081 50.000 0.00 0.00 0.00 4.63
6572 7595 2.158813 GGAAAAGACATCTATGGGCCGA 60.159 50.000 0.00 0.00 0.00 5.54
6573 7596 2.158755 AGGAAAAGACATCTATGGGCCG 60.159 50.000 0.00 0.00 0.00 6.13
6574 7597 3.217626 CAGGAAAAGACATCTATGGGCC 58.782 50.000 0.00 0.00 0.00 5.80
6631 7654 0.465705 CCAAGAATAGGCGAGCAGGA 59.534 55.000 0.00 0.00 0.00 3.86
6638 7661 1.705337 CGTGGCACCAAGAATAGGCG 61.705 60.000 12.86 0.00 0.00 5.52
6640 7663 0.748005 CCCGTGGCACCAAGAATAGG 60.748 60.000 12.86 4.47 0.00 2.57
6700 7723 1.305465 TAGGCCGTCTACTGCCCAA 60.305 57.895 11.41 0.00 45.87 4.12
6702 7725 2.813200 GTAGGCCGTCTACTGCCC 59.187 66.667 11.41 0.00 45.87 5.36
6709 7732 2.359967 GGCAGGAAGTAGGCCGTCT 61.360 63.158 0.00 0.00 38.04 4.18
6730 7753 5.789535 AGTACCCCCTACATTATCAGAAGT 58.210 41.667 0.00 0.00 0.00 3.01
6755 7778 5.522824 ACAAGTTACTGAGTTCGTTTTCCTC 59.477 40.000 0.00 0.00 0.00 3.71
6823 7846 4.387598 AGATAGGCTACACCACGTACTAG 58.612 47.826 0.00 0.00 43.14 2.57
6824 7847 4.428294 AGATAGGCTACACCACGTACTA 57.572 45.455 0.00 0.00 43.14 1.82
6825 7848 3.294038 AGATAGGCTACACCACGTACT 57.706 47.619 0.00 0.00 43.14 2.73
6885 7910 2.946990 GAGTCTCCGAGCTATATAGGGC 59.053 54.545 11.72 0.00 0.00 5.19
6890 7915 2.757868 GCATGGAGTCTCCGAGCTATAT 59.242 50.000 21.83 4.39 40.17 0.86
6891 7916 2.163509 GCATGGAGTCTCCGAGCTATA 58.836 52.381 21.83 2.29 40.17 1.31
6892 7917 0.965439 GCATGGAGTCTCCGAGCTAT 59.035 55.000 21.83 5.65 40.17 2.97
6893 7918 1.109920 GGCATGGAGTCTCCGAGCTA 61.110 60.000 25.68 6.79 40.17 3.32
6894 7919 2.430610 GGCATGGAGTCTCCGAGCT 61.431 63.158 25.68 6.36 40.17 4.09
6895 7920 2.107953 GGCATGGAGTCTCCGAGC 59.892 66.667 21.27 21.27 40.17 5.03
6897 7922 1.305297 ACTGGCATGGAGTCTCCGA 60.305 57.895 14.34 4.10 40.17 4.55
6898 7923 1.153489 CACTGGCATGGAGTCTCCG 60.153 63.158 14.34 1.94 40.17 4.63
6982 8016 1.073763 TCCAAATATCTGGATGGGCGG 59.926 52.381 0.00 0.00 40.71 6.13
6984 8018 2.376518 TCCTCCAAATATCTGGATGGGC 59.623 50.000 0.00 0.00 44.59 5.36
7010 8081 8.402798 TCATGAACTTTCTAGGATAGCTAGAG 57.597 38.462 0.00 0.00 38.99 2.43
7014 8085 5.221621 GGCTCATGAACTTTCTAGGATAGCT 60.222 44.000 0.00 0.00 38.99 3.32
7025 8096 5.796424 AAATCAAGTGGCTCATGAACTTT 57.204 34.783 8.28 0.00 31.88 2.66
7068 8139 8.143193 AGAAATCAAGTAGCTCATGTCATCTAG 58.857 37.037 0.00 0.00 0.00 2.43
7069 8140 8.016301 AGAAATCAAGTAGCTCATGTCATCTA 57.984 34.615 0.00 0.00 0.00 1.98
7070 8141 6.887013 AGAAATCAAGTAGCTCATGTCATCT 58.113 36.000 0.00 0.00 0.00 2.90
7071 8142 7.551035 AAGAAATCAAGTAGCTCATGTCATC 57.449 36.000 0.00 0.00 0.00 2.92
7072 8143 7.828223 AGAAAGAAATCAAGTAGCTCATGTCAT 59.172 33.333 0.00 0.00 0.00 3.06
7073 8144 7.164122 AGAAAGAAATCAAGTAGCTCATGTCA 58.836 34.615 0.00 0.00 0.00 3.58
7074 8145 7.548780 AGAGAAAGAAATCAAGTAGCTCATGTC 59.451 37.037 0.00 0.00 0.00 3.06
7075 8146 7.393216 AGAGAAAGAAATCAAGTAGCTCATGT 58.607 34.615 0.00 0.00 0.00 3.21
7076 8147 7.846644 AGAGAAAGAAATCAAGTAGCTCATG 57.153 36.000 0.00 0.00 0.00 3.07
7086 8157 9.219603 CCACACTGTATTAGAGAAAGAAATCAA 57.780 33.333 0.00 0.00 0.00 2.57
7087 8158 7.334421 GCCACACTGTATTAGAGAAAGAAATCA 59.666 37.037 0.00 0.00 0.00 2.57
7088 8159 7.201652 GGCCACACTGTATTAGAGAAAGAAATC 60.202 40.741 0.00 0.00 0.00 2.17
7089 8160 6.599638 GGCCACACTGTATTAGAGAAAGAAAT 59.400 38.462 0.00 0.00 0.00 2.17
7090 8161 5.938125 GGCCACACTGTATTAGAGAAAGAAA 59.062 40.000 0.00 0.00 0.00 2.52
7091 8162 5.488341 GGCCACACTGTATTAGAGAAAGAA 58.512 41.667 0.00 0.00 0.00 2.52
7092 8163 4.381612 CGGCCACACTGTATTAGAGAAAGA 60.382 45.833 2.24 0.00 0.00 2.52
7093 8164 3.865745 CGGCCACACTGTATTAGAGAAAG 59.134 47.826 2.24 0.00 0.00 2.62
7094 8165 3.259876 ACGGCCACACTGTATTAGAGAAA 59.740 43.478 2.24 0.00 35.54 2.52
7095 8166 2.829720 ACGGCCACACTGTATTAGAGAA 59.170 45.455 2.24 0.00 35.54 2.87
7096 8167 2.453521 ACGGCCACACTGTATTAGAGA 58.546 47.619 2.24 0.00 35.54 3.10
7097 8168 2.961526 ACGGCCACACTGTATTAGAG 57.038 50.000 2.24 0.00 35.54 2.43
7098 8169 2.563620 TGAACGGCCACACTGTATTAGA 59.436 45.455 2.24 0.00 36.64 2.10
7099 8170 2.967362 TGAACGGCCACACTGTATTAG 58.033 47.619 2.24 0.00 36.64 1.73
7100 8171 3.266636 CATGAACGGCCACACTGTATTA 58.733 45.455 2.24 0.00 36.64 0.98
7101 8172 2.083774 CATGAACGGCCACACTGTATT 58.916 47.619 2.24 0.00 36.64 1.89
7102 8173 1.678728 CCATGAACGGCCACACTGTAT 60.679 52.381 2.24 0.00 36.64 2.29
7103 8174 0.321210 CCATGAACGGCCACACTGTA 60.321 55.000 2.24 0.00 36.64 2.74
7104 8175 1.600636 CCATGAACGGCCACACTGT 60.601 57.895 2.24 0.00 40.66 3.55
7105 8176 0.677731 ATCCATGAACGGCCACACTG 60.678 55.000 2.24 1.13 0.00 3.66
7106 8177 0.908910 TATCCATGAACGGCCACACT 59.091 50.000 2.24 0.00 0.00 3.55
7107 8178 1.299541 CTATCCATGAACGGCCACAC 58.700 55.000 2.24 0.00 0.00 3.82
7108 8179 0.180171 CCTATCCATGAACGGCCACA 59.820 55.000 2.24 0.00 0.00 4.17
7109 8180 0.468226 TCCTATCCATGAACGGCCAC 59.532 55.000 2.24 0.00 0.00 5.01
7110 8181 0.758734 CTCCTATCCATGAACGGCCA 59.241 55.000 2.24 0.00 0.00 5.36
7113 8184 1.000163 CCGACTCCTATCCATGAACGG 60.000 57.143 0.00 0.00 0.00 4.44
7126 8197 1.087771 CCAACATTACCGCCGACTCC 61.088 60.000 0.00 0.00 0.00 3.85
7132 8203 3.919223 TTGTAAACCAACATTACCGCC 57.081 42.857 0.00 0.00 33.32 6.13
7138 8220 7.093945 GGACCATACAGATTGTAAACCAACATT 60.094 37.037 0.00 0.00 36.31 2.71
7150 8232 6.763610 GGTAGAGAAAAGGACCATACAGATTG 59.236 42.308 0.00 0.00 31.89 2.67
7152 8234 5.964477 TGGTAGAGAAAAGGACCATACAGAT 59.036 40.000 0.00 0.00 37.05 2.90
7154 8236 5.677319 TGGTAGAGAAAAGGACCATACAG 57.323 43.478 0.00 0.00 37.05 2.74
7160 8242 4.020128 ACTGACATGGTAGAGAAAAGGACC 60.020 45.833 0.00 0.00 0.00 4.46
7161 8243 4.932200 CACTGACATGGTAGAGAAAAGGAC 59.068 45.833 0.00 0.00 0.00 3.85
7163 8245 4.899502 ACACTGACATGGTAGAGAAAAGG 58.100 43.478 0.00 0.00 0.00 3.11
7164 8246 6.867662 AAACACTGACATGGTAGAGAAAAG 57.132 37.500 0.00 0.00 0.00 2.27
7165 8247 6.826231 TGAAAACACTGACATGGTAGAGAAAA 59.174 34.615 0.00 0.00 0.00 2.29
7166 8248 6.353323 TGAAAACACTGACATGGTAGAGAAA 58.647 36.000 0.00 0.00 0.00 2.52
7167 8249 5.924356 TGAAAACACTGACATGGTAGAGAA 58.076 37.500 0.00 0.00 0.00 2.87
7168 8250 5.545063 TGAAAACACTGACATGGTAGAGA 57.455 39.130 0.00 0.00 0.00 3.10
7169 8251 9.770097 ATATATGAAAACACTGACATGGTAGAG 57.230 33.333 0.00 0.00 0.00 2.43
7170 8252 9.546428 CATATATGAAAACACTGACATGGTAGA 57.454 33.333 6.92 0.00 0.00 2.59
7171 8253 9.330063 ACATATATGAAAACACTGACATGGTAG 57.670 33.333 19.63 0.00 0.00 3.18
7173 8255 9.330063 CTACATATATGAAAACACTGACATGGT 57.670 33.333 19.63 0.00 0.00 3.55
7174 8256 8.285394 GCTACATATATGAAAACACTGACATGG 58.715 37.037 19.63 0.00 0.00 3.66
7175 8257 8.006027 CGCTACATATATGAAAACACTGACATG 58.994 37.037 19.63 0.00 0.00 3.21
7176 8258 7.307396 GCGCTACATATATGAAAACACTGACAT 60.307 37.037 19.63 0.00 0.00 3.06
7177 8259 6.019075 GCGCTACATATATGAAAACACTGACA 60.019 38.462 19.63 0.00 0.00 3.58
7178 8260 6.201044 AGCGCTACATATATGAAAACACTGAC 59.799 38.462 19.63 0.00 0.00 3.51
7179 8261 6.280643 AGCGCTACATATATGAAAACACTGA 58.719 36.000 19.63 0.00 0.00 3.41
7180 8262 6.422100 AGAGCGCTACATATATGAAAACACTG 59.578 38.462 19.63 2.32 0.00 3.66
7181 8263 6.516718 AGAGCGCTACATATATGAAAACACT 58.483 36.000 19.63 8.77 0.00 3.55
7188 8270 6.765915 ATCAAGAGAGCGCTACATATATGA 57.234 37.500 19.63 9.47 0.00 2.15
7200 8282 3.616379 GGAGACTTTCAATCAAGAGAGCG 59.384 47.826 0.00 0.00 0.00 5.03
7211 8293 3.806591 CGCCTACGGAGACTTTCAA 57.193 52.632 0.00 0.00 34.97 2.69
7233 8319 0.678048 ATCAACCCAAGGAGAAGCGC 60.678 55.000 0.00 0.00 0.00 5.92
7261 8347 9.495572 AAGACTTGTATTTAGAAACAGAGGAAG 57.504 33.333 0.00 0.00 0.00 3.46
7262 8348 9.847224 AAAGACTTGTATTTAGAAACAGAGGAA 57.153 29.630 0.00 0.00 0.00 3.36
7340 8426 8.226448 CGGAGCAAAATGAATGAATCTATACTC 58.774 37.037 0.00 0.00 0.00 2.59
7341 8427 7.716998 ACGGAGCAAAATGAATGAATCTATACT 59.283 33.333 0.00 0.00 0.00 2.12
7344 8430 6.949352 ACGGAGCAAAATGAATGAATCTAT 57.051 33.333 0.00 0.00 0.00 1.98
7345 8431 7.498900 ACATACGGAGCAAAATGAATGAATCTA 59.501 33.333 0.00 0.00 0.00 1.98
7346 8432 6.319658 ACATACGGAGCAAAATGAATGAATCT 59.680 34.615 0.00 0.00 0.00 2.40
7348 8434 6.455360 ACATACGGAGCAAAATGAATGAAT 57.545 33.333 0.00 0.00 0.00 2.57
7349 8435 5.895636 ACATACGGAGCAAAATGAATGAA 57.104 34.783 0.00 0.00 0.00 2.57
7350 8436 6.112734 ACTACATACGGAGCAAAATGAATGA 58.887 36.000 0.00 0.00 0.00 2.57
7351 8437 6.258727 AGACTACATACGGAGCAAAATGAATG 59.741 38.462 0.00 0.00 0.00 2.67
7352 8438 6.349300 AGACTACATACGGAGCAAAATGAAT 58.651 36.000 0.00 0.00 0.00 2.57
7353 8439 5.730550 AGACTACATACGGAGCAAAATGAA 58.269 37.500 0.00 0.00 0.00 2.57
7354 8440 5.339008 AGACTACATACGGAGCAAAATGA 57.661 39.130 0.00 0.00 0.00 2.57
7357 8443 8.447833 CAATAAAAGACTACATACGGAGCAAAA 58.552 33.333 0.00 0.00 0.00 2.44
7358 8444 7.820386 TCAATAAAAGACTACATACGGAGCAAA 59.180 33.333 0.00 0.00 0.00 3.68
7360 8446 6.869695 TCAATAAAAGACTACATACGGAGCA 58.130 36.000 0.00 0.00 0.00 4.26
7361 8447 7.766219 TTCAATAAAAGACTACATACGGAGC 57.234 36.000 0.00 0.00 0.00 4.70
7393 8479 9.413734 CCCTCCATTCTCAAATATAAGTCTTTT 57.586 33.333 0.00 0.00 0.00 2.27
7394 8480 8.781951 TCCCTCCATTCTCAAATATAAGTCTTT 58.218 33.333 0.00 0.00 0.00 2.52
7395 8481 8.337118 TCCCTCCATTCTCAAATATAAGTCTT 57.663 34.615 0.00 0.00 0.00 3.01
7396 8482 7.570607 ACTCCCTCCATTCTCAAATATAAGTCT 59.429 37.037 0.00 0.00 0.00 3.24
7397 8483 7.740805 ACTCCCTCCATTCTCAAATATAAGTC 58.259 38.462 0.00 0.00 0.00 3.01
7398 8484 7.698163 ACTCCCTCCATTCTCAAATATAAGT 57.302 36.000 0.00 0.00 0.00 2.24
7399 8485 8.875168 AGTACTCCCTCCATTCTCAAATATAAG 58.125 37.037 0.00 0.00 0.00 1.73
7400 8486 8.798975 AGTACTCCCTCCATTCTCAAATATAA 57.201 34.615 0.00 0.00 0.00 0.98
7401 8487 9.535170 CTAGTACTCCCTCCATTCTCAAATATA 57.465 37.037 0.00 0.00 0.00 0.86
7402 8488 7.456269 CCTAGTACTCCCTCCATTCTCAAATAT 59.544 40.741 0.00 0.00 0.00 1.28
7403 8489 6.782988 CCTAGTACTCCCTCCATTCTCAAATA 59.217 42.308 0.00 0.00 0.00 1.40
7404 8490 5.604650 CCTAGTACTCCCTCCATTCTCAAAT 59.395 44.000 0.00 0.00 0.00 2.32
7405 8491 4.962995 CCTAGTACTCCCTCCATTCTCAAA 59.037 45.833 0.00 0.00 0.00 2.69
7406 8492 4.016479 ACCTAGTACTCCCTCCATTCTCAA 60.016 45.833 0.00 0.00 0.00 3.02
7407 8493 3.532232 ACCTAGTACTCCCTCCATTCTCA 59.468 47.826 0.00 0.00 0.00 3.27
7408 8494 4.187506 ACCTAGTACTCCCTCCATTCTC 57.812 50.000 0.00 0.00 0.00 2.87
7409 8495 5.745988 TTACCTAGTACTCCCTCCATTCT 57.254 43.478 0.00 0.00 0.00 2.40
7410 8496 6.997942 AATTACCTAGTACTCCCTCCATTC 57.002 41.667 0.00 0.00 0.00 2.67
7411 8497 7.602868 ACTAATTACCTAGTACTCCCTCCATT 58.397 38.462 0.00 0.00 30.13 3.16
7412 8498 7.176909 ACTAATTACCTAGTACTCCCTCCAT 57.823 40.000 0.00 0.00 30.13 3.41
7413 8499 6.603110 ACTAATTACCTAGTACTCCCTCCA 57.397 41.667 0.00 0.00 30.13 3.86
7414 8500 7.065504 TGAACTAATTACCTAGTACTCCCTCC 58.934 42.308 0.00 0.00 31.72 4.30
7415 8501 7.997803 TCTGAACTAATTACCTAGTACTCCCTC 59.002 40.741 0.00 0.00 31.72 4.30
7416 8502 7.880623 TCTGAACTAATTACCTAGTACTCCCT 58.119 38.462 0.00 0.00 31.72 4.20
7417 8503 7.779326 ACTCTGAACTAATTACCTAGTACTCCC 59.221 40.741 0.00 0.00 31.72 4.30
7418 8504 8.750515 ACTCTGAACTAATTACCTAGTACTCC 57.249 38.462 0.00 0.00 31.72 3.85
7426 8512 7.603024 GCACTTTGTACTCTGAACTAATTACCT 59.397 37.037 0.00 0.00 0.00 3.08
7427 8513 7.386848 TGCACTTTGTACTCTGAACTAATTACC 59.613 37.037 0.00 0.00 0.00 2.85
7428 8514 8.221766 GTGCACTTTGTACTCTGAACTAATTAC 58.778 37.037 10.32 0.00 30.04 1.89
7429 8515 8.148351 AGTGCACTTTGTACTCTGAACTAATTA 58.852 33.333 15.25 0.00 39.05 1.40
7430 8516 6.992715 AGTGCACTTTGTACTCTGAACTAATT 59.007 34.615 15.25 0.00 39.05 1.40
7431 8517 6.525629 AGTGCACTTTGTACTCTGAACTAAT 58.474 36.000 15.25 0.00 39.05 1.73
7432 8518 5.914033 AGTGCACTTTGTACTCTGAACTAA 58.086 37.500 15.25 0.00 39.05 2.24
7433 8519 5.531122 AGTGCACTTTGTACTCTGAACTA 57.469 39.130 15.25 0.00 39.05 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.