Multiple sequence alignment - TraesCS4A01G184300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G184300 chr4A 100.000 6661 0 0 1 6661 462225642 462218982 0.000000e+00 12301.0
1 TraesCS4A01G184300 chr4D 97.328 3218 65 11 2592 5796 115044519 115047728 0.000000e+00 5446.0
2 TraesCS4A01G184300 chr4D 95.102 735 27 8 896 1629 115042733 115043459 0.000000e+00 1149.0
3 TraesCS4A01G184300 chr4D 94.937 553 14 7 6120 6661 115047836 115048385 0.000000e+00 854.0
4 TraesCS4A01G184300 chr4D 93.827 486 15 3 1943 2413 115043582 115044067 0.000000e+00 717.0
5 TraesCS4A01G184300 chr4D 86.261 706 40 9 206 883 115041986 115042662 0.000000e+00 713.0
6 TraesCS4A01G184300 chr4D 93.365 211 10 2 1 210 115041523 115041730 6.490000e-80 309.0
7 TraesCS4A01G184300 chr4D 94.330 194 10 1 2403 2595 115044090 115044283 5.050000e-76 296.0
8 TraesCS4A01G184300 chr4D 98.347 121 0 2 1768 1887 115043456 115043575 1.880000e-50 211.0
9 TraesCS4A01G184300 chr4D 83.636 165 25 2 3257 3420 179858592 179858429 3.220000e-33 154.0
10 TraesCS4A01G184300 chr4B 91.417 3437 189 44 2403 5796 175472793 175476166 0.000000e+00 4615.0
11 TraesCS4A01G184300 chr4B 94.046 739 31 8 894 1629 175471502 175472230 0.000000e+00 1109.0
12 TraesCS4A01G184300 chr4B 96.929 521 14 2 6133 6653 175536733 175537251 0.000000e+00 872.0
13 TraesCS4A01G184300 chr4B 89.655 551 29 20 1768 2316 175472227 175472751 0.000000e+00 676.0
14 TraesCS4A01G184300 chr4B 82.927 205 34 1 9 212 40905954 40905750 4.100000e-42 183.0
15 TraesCS4A01G184300 chr6D 84.902 1881 215 36 3426 5293 158075685 158073861 0.000000e+00 1836.0
16 TraesCS4A01G184300 chr6D 95.745 141 6 0 1629 1769 459701853 459701993 1.870000e-55 228.0
17 TraesCS4A01G184300 chr6D 94.483 145 8 0 1627 1771 440963439 440963295 2.420000e-54 224.0
18 TraesCS4A01G184300 chr6B 84.795 1881 214 41 3426 5293 288793126 288794947 0.000000e+00 1823.0
19 TraesCS4A01G184300 chr6B 95.618 251 11 0 6411 6661 651366685 651366435 2.890000e-108 403.0
20 TraesCS4A01G184300 chr6B 94.821 251 13 0 6411 6661 76227831 76227581 6.260000e-105 392.0
21 TraesCS4A01G184300 chr6B 94.024 251 15 0 6411 6661 671657596 671657846 1.360000e-101 381.0
22 TraesCS4A01G184300 chr6A 84.803 1882 213 42 3426 5293 213148502 213150324 0.000000e+00 1823.0
23 TraesCS4A01G184300 chr6A 96.350 137 5 0 1633 1769 605337279 605337143 6.720000e-55 226.0
24 TraesCS4A01G184300 chr7B 81.145 716 81 23 212 878 442299786 442299076 5.920000e-145 525.0
25 TraesCS4A01G184300 chr7B 97.260 146 4 0 1629 1774 247261582 247261437 1.430000e-61 248.0
26 TraesCS4A01G184300 chr7B 84.793 217 28 3 5876 6087 461245954 461245738 5.230000e-51 213.0
27 TraesCS4A01G184300 chr2B 92.938 354 24 1 6308 6661 275457918 275457566 1.280000e-141 514.0
28 TraesCS4A01G184300 chr2B 85.780 218 24 5 5876 6087 155943166 155942950 2.420000e-54 224.0
29 TraesCS4A01G184300 chr3B 94.821 251 13 0 6411 6661 748485473 748485723 6.260000e-105 392.0
30 TraesCS4A01G184300 chr3B 92.715 151 11 0 1619 1769 765923666 765923816 1.120000e-52 219.0
31 TraesCS4A01G184300 chr3B 84.706 170 21 5 3257 3424 738296596 738296430 1.490000e-36 165.0
32 TraesCS4A01G184300 chr3B 83.333 156 20 5 3261 3415 65236340 65236490 9.010000e-29 139.0
33 TraesCS4A01G184300 chr3B 97.368 38 1 0 6308 6345 748485436 748485473 1.550000e-06 65.8
34 TraesCS4A01G184300 chr5B 93.651 252 14 2 6411 6661 25482881 25483131 6.310000e-100 375.0
35 TraesCS4A01G184300 chr5B 85.253 217 27 3 5876 6087 698451455 698451671 1.120000e-52 219.0
36 TraesCS4A01G184300 chr5B 97.541 122 3 0 6411 6532 661259593 661259714 6.770000e-50 209.0
37 TraesCS4A01G184300 chr5B 84.524 168 26 0 3257 3424 669487931 669487764 4.130000e-37 167.0
38 TraesCS4A01G184300 chr5B 80.000 165 33 0 3257 3421 367508397 367508233 9.070000e-24 122.0
39 TraesCS4A01G184300 chr5B 97.368 38 1 0 6308 6345 25482844 25482881 1.550000e-06 65.8
40 TraesCS4A01G184300 chr1B 80.093 432 35 16 495 879 616312620 616312193 2.370000e-69 274.0
41 TraesCS4A01G184300 chr1B 85.253 217 27 3 5876 6087 664955991 664955775 1.120000e-52 219.0
42 TraesCS4A01G184300 chr1B 84.404 218 28 4 5876 6087 58568114 58567897 6.770000e-50 209.0
43 TraesCS4A01G184300 chr1B 82.353 170 25 5 3257 3424 553013629 553013463 6.960000e-30 143.0
44 TraesCS4A01G184300 chr7D 95.455 154 6 1 1625 1777 618707132 618707285 1.860000e-60 244.0
45 TraesCS4A01G184300 chr2D 94.667 150 8 0 1622 1771 120092421 120092570 4.020000e-57 233.0
46 TraesCS4A01G184300 chr3D 94.595 148 8 0 1627 1774 18361852 18361999 5.200000e-56 230.0
47 TraesCS4A01G184300 chr1D 95.172 145 7 0 1627 1771 99547684 99547540 5.200000e-56 230.0
48 TraesCS4A01G184300 chr3A 84.305 223 29 4 5878 6094 588838792 588838570 5.230000e-51 213.0
49 TraesCS4A01G184300 chr3A 84.722 216 27 4 5878 6087 713416634 713416849 1.880000e-50 211.0
50 TraesCS4A01G184300 chr7A 84.579 214 28 3 5878 6086 673004231 673004444 2.430000e-49 207.0
51 TraesCS4A01G184300 chr2A 84.259 216 29 3 5876 6086 1501852 1502067 8.760000e-49 206.0
52 TraesCS4A01G184300 chr5A 77.457 173 34 3 3257 3425 28599463 28599634 1.530000e-16 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G184300 chr4A 462218982 462225642 6660 True 12301.000000 12301 100.000000 1 6661 1 chr4A.!!$R1 6660
1 TraesCS4A01G184300 chr4D 115041523 115048385 6862 False 1211.875000 5446 94.187125 1 6661 8 chr4D.!!$F1 6660
2 TraesCS4A01G184300 chr4B 175471502 175476166 4664 False 2133.333333 4615 91.706000 894 5796 3 chr4B.!!$F2 4902
3 TraesCS4A01G184300 chr4B 175536733 175537251 518 False 872.000000 872 96.929000 6133 6653 1 chr4B.!!$F1 520
4 TraesCS4A01G184300 chr6D 158073861 158075685 1824 True 1836.000000 1836 84.902000 3426 5293 1 chr6D.!!$R1 1867
5 TraesCS4A01G184300 chr6B 288793126 288794947 1821 False 1823.000000 1823 84.795000 3426 5293 1 chr6B.!!$F1 1867
6 TraesCS4A01G184300 chr6A 213148502 213150324 1822 False 1823.000000 1823 84.803000 3426 5293 1 chr6A.!!$F1 1867
7 TraesCS4A01G184300 chr7B 442299076 442299786 710 True 525.000000 525 81.145000 212 878 1 chr7B.!!$R2 666

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
762 1041 0.606096 TTGCGAAGTAGGCTAGCACA 59.394 50.0 18.24 0.00 37.91 4.57 F
1095 1443 0.617820 ACCCAACCTCTGTCGCCTAT 60.618 55.0 0.00 0.00 0.00 2.57 F
1651 2002 0.036388 TGTGTTCGGGAATCCTCTGC 60.036 55.0 0.00 0.00 0.00 4.26 F
1722 2073 0.171903 AATTGAACTGCATGCCGCTC 59.828 50.0 16.68 10.52 43.06 5.03 F
1752 2103 0.179161 CGGAGTTACAGAGCGGAGTG 60.179 60.0 0.00 0.00 0.00 3.51 F
1753 2104 1.174783 GGAGTTACAGAGCGGAGTGA 58.825 55.0 0.00 0.00 0.00 3.41 F
3771 4423 0.892358 CACAGCAACCCAGAGCATGT 60.892 55.0 0.00 0.00 0.00 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1632 1983 0.036388 GCAGAGGATTCCCGAACACA 60.036 55.000 0.0 0.00 37.58 3.72 R
3066 3709 2.032681 GCCTTGGCTATAGCGGGG 59.967 66.667 18.3 18.58 43.26 5.73 R
3324 3970 0.620556 TCTGGGCCCTAAGAGCAAAG 59.379 55.000 25.7 8.65 0.00 2.77 R
3552 4200 1.064952 ACCGCATTTTACGCATTAGGC 59.935 47.619 0.0 0.00 39.90 3.93 R
3771 4423 9.832445 AAGAGATTCAGACAAAGTAAACTACAA 57.168 29.630 0.0 0.00 0.00 2.41 R
4069 4727 5.351458 TCGTGTCCATGTTCTGATTCATAG 58.649 41.667 0.0 0.00 0.00 2.23 R
5938 6929 0.039437 CACGAAGTCACTGTAGGCGT 60.039 55.000 0.0 0.00 41.61 5.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 27 2.419159 GCTTCTTTTATACCCCGGACGT 60.419 50.000 0.73 0.04 0.00 4.34
46 48 8.958043 GGACGTTGATGCAATTCTTAATATTTC 58.042 33.333 0.00 0.00 0.00 2.17
47 49 9.722056 GACGTTGATGCAATTCTTAATATTTCT 57.278 29.630 0.00 0.00 0.00 2.52
52 54 9.022915 TGATGCAATTCTTAATATTTCTTTGCG 57.977 29.630 0.00 0.00 40.69 4.85
53 55 7.220599 TGCAATTCTTAATATTTCTTTGCGC 57.779 32.000 0.00 0.00 40.69 6.09
54 56 6.810676 TGCAATTCTTAATATTTCTTTGCGCA 59.189 30.769 5.66 5.66 40.69 6.09
55 57 7.492020 TGCAATTCTTAATATTTCTTTGCGCAT 59.508 29.630 12.75 0.00 40.69 4.73
56 58 8.967218 GCAATTCTTAATATTTCTTTGCGCATA 58.033 29.630 12.75 5.38 0.00 3.14
58 60 9.683069 AATTCTTAATATTTCTTTGCGCATAGG 57.317 29.630 24.65 12.31 0.00 2.57
97 99 1.779061 GCTTGGGTGGGTGAGAGGAA 61.779 60.000 0.00 0.00 0.00 3.36
118 120 8.159229 AGGAATGGGACTTATACTGTAAAGTT 57.841 34.615 13.02 2.53 36.10 2.66
180 182 4.774124 TCTAGAAGAAGGGACGATAACGA 58.226 43.478 0.00 0.00 42.66 3.85
216 478 7.399191 AGACAGATAAACAGTTGTGGTCCTATA 59.601 37.037 0.00 0.00 0.00 1.31
276 538 4.352893 TGTGGTCTATCTGGACATCTCAA 58.647 43.478 0.00 0.00 37.91 3.02
282 544 8.717717 TGGTCTATCTGGACATCTCAAAATAAT 58.282 33.333 0.00 0.00 37.91 1.28
318 580 3.949132 TGGTCGGATTGATCATGTTCAA 58.051 40.909 18.91 18.91 39.77 2.69
340 602 7.789026 TCAATCTATGAAGCTGATGAGAGAAA 58.211 34.615 0.00 0.00 34.30 2.52
374 636 0.747255 AATCTACCTCGCGAGCATGT 59.253 50.000 30.49 23.63 0.00 3.21
463 725 1.918609 GTGTTTCTATGGACGAGCGTC 59.081 52.381 14.17 14.17 43.87 5.19
507 770 3.117776 TCGCTCCTATACTTCCCTACACA 60.118 47.826 0.00 0.00 0.00 3.72
510 773 4.404715 GCTCCTATACTTCCCTACACACAA 59.595 45.833 0.00 0.00 0.00 3.33
511 774 5.070580 GCTCCTATACTTCCCTACACACAAT 59.929 44.000 0.00 0.00 0.00 2.71
552 815 0.937304 CATCACGGACCCGCTTATTG 59.063 55.000 8.55 0.00 44.19 1.90
559 822 2.048312 GACCCGCTTATTGCCGAAGC 62.048 60.000 4.66 4.66 44.80 3.86
585 864 4.202161 TGTTATTTTTGCAAAGCTTCGGGA 60.202 37.500 12.41 0.00 0.00 5.14
625 904 2.352814 CGAGACGGACTGTTTGGAGATT 60.353 50.000 0.00 0.00 0.00 2.40
632 911 4.216257 CGGACTGTTTGGAGATTGTCAATT 59.784 41.667 0.00 0.00 0.00 2.32
644 923 2.686558 TGTCAATTTCTGCAACTCGC 57.313 45.000 0.00 0.00 42.89 5.03
646 925 1.069906 GTCAATTTCTGCAACTCGCGT 60.070 47.619 5.77 0.00 46.97 6.01
664 943 1.802069 GTCAGGTTCTTCCAGCTGTC 58.198 55.000 13.81 0.00 42.03 3.51
665 944 1.070758 GTCAGGTTCTTCCAGCTGTCA 59.929 52.381 13.81 0.00 42.03 3.58
692 971 4.071423 GCCCATGCACCTTTGTTTAAATT 58.929 39.130 0.00 0.00 37.47 1.82
726 1005 9.793252 ATTCAACATGTATTTAGATCAGCAAAC 57.207 29.630 0.00 0.00 0.00 2.93
731 1010 8.796475 ACATGTATTTAGATCAGCAAACTTTGT 58.204 29.630 0.00 0.00 0.00 2.83
734 1013 8.629158 TGTATTTAGATCAGCAAACTTTGTTGT 58.371 29.630 15.52 5.93 41.82 3.32
744 1023 6.092533 CAGCAAACTTTGTTGTCCATCTTTTT 59.907 34.615 9.56 0.00 37.15 1.94
745 1024 6.092533 AGCAAACTTTGTTGTCCATCTTTTTG 59.907 34.615 3.48 0.00 0.00 2.44
746 1025 6.250089 CAAACTTTGTTGTCCATCTTTTTGC 58.750 36.000 0.00 0.00 0.00 3.68
747 1026 4.111916 ACTTTGTTGTCCATCTTTTTGCG 58.888 39.130 0.00 0.00 0.00 4.85
748 1027 4.142271 ACTTTGTTGTCCATCTTTTTGCGA 60.142 37.500 0.00 0.00 0.00 5.10
749 1028 4.377839 TTGTTGTCCATCTTTTTGCGAA 57.622 36.364 0.00 0.00 0.00 4.70
750 1029 3.963665 TGTTGTCCATCTTTTTGCGAAG 58.036 40.909 0.00 0.00 0.00 3.79
751 1030 3.380004 TGTTGTCCATCTTTTTGCGAAGT 59.620 39.130 0.00 0.00 0.00 3.01
752 1031 4.576873 TGTTGTCCATCTTTTTGCGAAGTA 59.423 37.500 0.00 0.00 0.00 2.24
753 1032 5.147162 GTTGTCCATCTTTTTGCGAAGTAG 58.853 41.667 0.00 0.00 0.00 2.57
754 1033 3.751175 TGTCCATCTTTTTGCGAAGTAGG 59.249 43.478 0.00 0.00 0.00 3.18
755 1034 2.747446 TCCATCTTTTTGCGAAGTAGGC 59.253 45.455 0.00 0.00 0.00 3.93
756 1035 2.749621 CCATCTTTTTGCGAAGTAGGCT 59.250 45.455 0.00 0.00 0.00 4.58
757 1036 3.938963 CCATCTTTTTGCGAAGTAGGCTA 59.061 43.478 0.00 0.00 0.00 3.93
758 1037 4.034510 CCATCTTTTTGCGAAGTAGGCTAG 59.965 45.833 0.00 0.00 0.00 3.42
759 1038 3.000727 TCTTTTTGCGAAGTAGGCTAGC 58.999 45.455 6.04 6.04 0.00 3.42
760 1039 2.465860 TTTTGCGAAGTAGGCTAGCA 57.534 45.000 18.24 0.00 36.95 3.49
761 1040 1.722011 TTTGCGAAGTAGGCTAGCAC 58.278 50.000 18.24 7.10 37.91 4.40
762 1041 0.606096 TTGCGAAGTAGGCTAGCACA 59.394 50.000 18.24 0.00 37.91 4.57
763 1042 0.824109 TGCGAAGTAGGCTAGCACAT 59.176 50.000 18.24 4.22 34.93 3.21
764 1043 1.207089 TGCGAAGTAGGCTAGCACATT 59.793 47.619 18.24 5.22 34.93 2.71
765 1044 1.594862 GCGAAGTAGGCTAGCACATTG 59.405 52.381 18.24 5.23 0.00 2.82
766 1045 2.205074 CGAAGTAGGCTAGCACATTGG 58.795 52.381 18.24 3.17 0.00 3.16
767 1046 2.159099 CGAAGTAGGCTAGCACATTGGA 60.159 50.000 18.24 0.00 0.00 3.53
768 1047 3.462021 GAAGTAGGCTAGCACATTGGAG 58.538 50.000 18.24 0.00 0.00 3.86
769 1048 1.765314 AGTAGGCTAGCACATTGGAGG 59.235 52.381 18.24 0.00 0.00 4.30
796 1075 6.606069 ACAGAGTGCTGGATAGATTCTACTA 58.394 40.000 0.00 0.00 46.60 1.82
797 1076 6.488683 ACAGAGTGCTGGATAGATTCTACTAC 59.511 42.308 0.00 0.00 46.60 2.73
798 1077 6.714810 CAGAGTGCTGGATAGATTCTACTACT 59.285 42.308 0.00 0.00 38.51 2.57
820 1099 5.465724 ACTCCTAGTTTTCTTGTAACTTGCG 59.534 40.000 0.00 0.00 37.12 4.85
821 1100 5.603596 TCCTAGTTTTCTTGTAACTTGCGA 58.396 37.500 0.00 0.00 37.12 5.10
822 1101 6.228258 TCCTAGTTTTCTTGTAACTTGCGAT 58.772 36.000 0.00 0.00 37.12 4.58
824 1103 7.015877 CCTAGTTTTCTTGTAACTTGCGATTC 58.984 38.462 0.00 0.00 37.12 2.52
825 1104 6.619801 AGTTTTCTTGTAACTTGCGATTCT 57.380 33.333 0.00 0.00 32.06 2.40
826 1105 6.430451 AGTTTTCTTGTAACTTGCGATTCTG 58.570 36.000 0.00 0.00 32.06 3.02
865 1153 7.957002 TGTTGAATAAAGCTCCCAAATTAACA 58.043 30.769 0.00 0.00 0.00 2.41
873 1161 3.993736 GCTCCCAAATTAACACGCAAAAT 59.006 39.130 0.00 0.00 0.00 1.82
897 1218 1.166531 AAGTTGAGGACCAAGCGTGC 61.167 55.000 0.00 0.00 35.03 5.34
916 1263 1.537135 GCAGTCGGCAGTCTCTTATCC 60.537 57.143 0.00 0.00 43.97 2.59
956 1303 0.991355 TTCCCACAACACACCTCCCT 60.991 55.000 0.00 0.00 0.00 4.20
1095 1443 0.617820 ACCCAACCTCTGTCGCCTAT 60.618 55.000 0.00 0.00 0.00 2.57
1097 1445 1.473434 CCCAACCTCTGTCGCCTATTC 60.473 57.143 0.00 0.00 0.00 1.75
1159 1507 1.805945 GTGCTACCTCGCCAACTCG 60.806 63.158 0.00 0.00 0.00 4.18
1273 1621 7.036220 CCGTAGATTTGACTCTCTGTGTTAAT 58.964 38.462 0.00 0.00 0.00 1.40
1310 1658 3.003480 CCGAAAGTTCATCTGACCCTTC 58.997 50.000 0.00 0.00 0.00 3.46
1327 1675 4.410228 ACCCTTCATGTGCTACTATGATGT 59.590 41.667 0.00 0.00 33.68 3.06
1330 1678 6.815641 CCCTTCATGTGCTACTATGATGTATC 59.184 42.308 0.00 0.00 33.68 2.24
1418 1769 4.760204 GCTGCTTAACCTTTAGTTTCCTGA 59.240 41.667 0.00 0.00 40.05 3.86
1451 1802 5.123820 TGTTCTGTATGCTAGCAATTTGTCC 59.876 40.000 23.54 8.73 0.00 4.02
1503 1854 3.759581 AGACCAGATTCATGTGCACTTT 58.240 40.909 19.41 2.38 0.00 2.66
1504 1855 4.147321 AGACCAGATTCATGTGCACTTTT 58.853 39.130 19.41 0.00 0.00 2.27
1595 1946 2.053627 GCGCAGACAATGTTGAAAAGG 58.946 47.619 0.30 0.00 0.00 3.11
1625 1976 6.996282 ACTATATGGCCAGTAAACAACCATAC 59.004 38.462 13.05 0.00 44.02 2.39
1626 1977 3.799432 TGGCCAGTAAACAACCATACT 57.201 42.857 0.00 0.00 32.69 2.12
1627 1978 4.912317 TGGCCAGTAAACAACCATACTA 57.088 40.909 0.00 0.00 31.35 1.82
1628 1979 5.244189 TGGCCAGTAAACAACCATACTAA 57.756 39.130 0.00 0.00 31.35 2.24
1629 1980 5.250200 TGGCCAGTAAACAACCATACTAAG 58.750 41.667 0.00 0.00 31.35 2.18
1630 1981 4.638865 GGCCAGTAAACAACCATACTAAGG 59.361 45.833 0.00 0.00 31.35 2.69
1631 1982 4.095932 GCCAGTAAACAACCATACTAAGGC 59.904 45.833 0.00 0.00 35.41 4.35
1632 1983 5.497474 CCAGTAAACAACCATACTAAGGCT 58.503 41.667 0.00 0.00 31.35 4.58
1633 1984 5.354234 CCAGTAAACAACCATACTAAGGCTG 59.646 44.000 0.00 0.00 31.35 4.85
1634 1985 5.938125 CAGTAAACAACCATACTAAGGCTGT 59.062 40.000 0.00 0.00 37.05 4.40
1635 1986 5.938125 AGTAAACAACCATACTAAGGCTGTG 59.062 40.000 0.00 0.00 35.73 3.66
1636 1987 4.367039 AACAACCATACTAAGGCTGTGT 57.633 40.909 0.00 0.00 35.73 3.72
1637 1988 4.367039 ACAACCATACTAAGGCTGTGTT 57.633 40.909 0.00 0.00 34.36 3.32
1638 1989 4.324267 ACAACCATACTAAGGCTGTGTTC 58.676 43.478 0.00 0.00 34.36 3.18
1639 1990 3.247006 ACCATACTAAGGCTGTGTTCG 57.753 47.619 0.00 0.00 0.00 3.95
1640 1991 2.093658 ACCATACTAAGGCTGTGTTCGG 60.094 50.000 0.00 0.00 0.00 4.30
1641 1992 2.550978 CATACTAAGGCTGTGTTCGGG 58.449 52.381 0.00 0.00 0.00 5.14
1642 1993 1.927487 TACTAAGGCTGTGTTCGGGA 58.073 50.000 0.00 0.00 0.00 5.14
1643 1994 1.053424 ACTAAGGCTGTGTTCGGGAA 58.947 50.000 0.00 0.00 0.00 3.97
1644 1995 1.628846 ACTAAGGCTGTGTTCGGGAAT 59.371 47.619 0.00 0.00 0.00 3.01
1645 1996 2.280628 CTAAGGCTGTGTTCGGGAATC 58.719 52.381 0.00 0.00 0.00 2.52
1646 1997 0.322546 AAGGCTGTGTTCGGGAATCC 60.323 55.000 0.00 0.00 0.00 3.01
1647 1998 1.201429 AGGCTGTGTTCGGGAATCCT 61.201 55.000 0.00 0.00 0.00 3.24
1648 1999 0.744771 GGCTGTGTTCGGGAATCCTC 60.745 60.000 0.00 0.00 0.00 3.71
1649 2000 0.250513 GCTGTGTTCGGGAATCCTCT 59.749 55.000 0.00 0.00 0.00 3.69
1650 2001 2.009042 GCTGTGTTCGGGAATCCTCTG 61.009 57.143 0.00 0.00 0.00 3.35
1651 2002 0.036388 TGTGTTCGGGAATCCTCTGC 60.036 55.000 0.00 0.00 0.00 4.26
1652 2003 0.250513 GTGTTCGGGAATCCTCTGCT 59.749 55.000 0.00 0.00 0.00 4.24
1653 2004 0.537188 TGTTCGGGAATCCTCTGCTC 59.463 55.000 0.00 0.00 0.00 4.26
1654 2005 0.179070 GTTCGGGAATCCTCTGCTCC 60.179 60.000 0.00 0.00 0.00 4.70
1655 2006 0.325671 TTCGGGAATCCTCTGCTCCT 60.326 55.000 0.00 0.00 0.00 3.69
1656 2007 0.757188 TCGGGAATCCTCTGCTCCTC 60.757 60.000 0.00 0.00 0.00 3.71
1657 2008 1.753368 CGGGAATCCTCTGCTCCTCC 61.753 65.000 0.00 0.00 0.00 4.30
1658 2009 1.745264 GGAATCCTCTGCTCCTCCG 59.255 63.158 0.00 0.00 0.00 4.63
1659 2010 1.068921 GAATCCTCTGCTCCTCCGC 59.931 63.158 0.00 0.00 0.00 5.54
1660 2011 2.376228 GAATCCTCTGCTCCTCCGCC 62.376 65.000 0.00 0.00 0.00 6.13
1661 2012 3.686098 ATCCTCTGCTCCTCCGCCA 62.686 63.158 0.00 0.00 0.00 5.69
1662 2013 3.847602 CCTCTGCTCCTCCGCCAG 61.848 72.222 0.00 0.00 0.00 4.85
1663 2014 2.757508 CTCTGCTCCTCCGCCAGA 60.758 66.667 0.00 0.00 0.00 3.86
1664 2015 2.757508 TCTGCTCCTCCGCCAGAG 60.758 66.667 0.00 0.00 42.83 3.35
1665 2016 2.757508 CTGCTCCTCCGCCAGAGA 60.758 66.667 0.00 0.00 46.50 3.10
1666 2017 2.757508 TGCTCCTCCGCCAGAGAG 60.758 66.667 0.00 0.00 46.50 3.20
1667 2018 4.219999 GCTCCTCCGCCAGAGAGC 62.220 72.222 0.00 0.00 46.50 4.09
1689 2040 4.016706 CGGACGGAGCACCCCTTT 62.017 66.667 0.00 0.00 0.00 3.11
1690 2041 2.046217 GGACGGAGCACCCCTTTC 60.046 66.667 0.00 0.00 0.00 2.62
1691 2042 2.434359 GACGGAGCACCCCTTTCG 60.434 66.667 0.00 0.00 0.00 3.46
1692 2043 4.699522 ACGGAGCACCCCTTTCGC 62.700 66.667 0.00 0.00 0.00 4.70
1693 2044 4.394712 CGGAGCACCCCTTTCGCT 62.395 66.667 0.00 0.00 39.12 4.93
1694 2045 2.747855 GGAGCACCCCTTTCGCTG 60.748 66.667 0.00 0.00 35.75 5.18
1695 2046 3.435186 GAGCACCCCTTTCGCTGC 61.435 66.667 0.00 0.00 35.75 5.25
1696 2047 3.909086 GAGCACCCCTTTCGCTGCT 62.909 63.158 0.00 0.00 42.73 4.24
1697 2048 3.435186 GCACCCCTTTCGCTGCTC 61.435 66.667 0.00 0.00 0.00 4.26
1698 2049 3.121030 CACCCCTTTCGCTGCTCG 61.121 66.667 0.00 0.00 40.15 5.03
1700 2051 4.767255 CCCCTTTCGCTGCTCGCT 62.767 66.667 0.00 0.00 38.27 4.93
1701 2052 2.184322 CCCTTTCGCTGCTCGCTA 59.816 61.111 0.00 0.00 38.27 4.26
1702 2053 1.447838 CCCTTTCGCTGCTCGCTAA 60.448 57.895 0.00 0.00 38.27 3.09
1703 2054 1.019278 CCCTTTCGCTGCTCGCTAAA 61.019 55.000 0.00 0.00 38.27 1.85
1704 2055 0.796312 CCTTTCGCTGCTCGCTAAAA 59.204 50.000 0.00 0.00 33.56 1.52
1705 2056 1.398390 CCTTTCGCTGCTCGCTAAAAT 59.602 47.619 0.00 0.00 33.56 1.82
1706 2057 2.159517 CCTTTCGCTGCTCGCTAAAATT 60.160 45.455 0.00 0.00 33.56 1.82
1707 2058 2.525750 TTCGCTGCTCGCTAAAATTG 57.474 45.000 0.00 0.00 38.27 2.32
1708 2059 1.720805 TCGCTGCTCGCTAAAATTGA 58.279 45.000 0.00 0.00 38.27 2.57
1709 2060 2.073056 TCGCTGCTCGCTAAAATTGAA 58.927 42.857 0.00 0.00 38.27 2.69
1710 2061 2.159707 TCGCTGCTCGCTAAAATTGAAC 60.160 45.455 0.00 0.00 38.27 3.18
1711 2062 2.159653 CGCTGCTCGCTAAAATTGAACT 60.160 45.455 0.00 0.00 36.13 3.01
1712 2063 3.166657 GCTGCTCGCTAAAATTGAACTG 58.833 45.455 0.00 0.00 35.14 3.16
1713 2064 3.166657 CTGCTCGCTAAAATTGAACTGC 58.833 45.455 0.00 0.00 0.00 4.40
1714 2065 2.551887 TGCTCGCTAAAATTGAACTGCA 59.448 40.909 0.00 0.00 0.00 4.41
1715 2066 3.191162 TGCTCGCTAAAATTGAACTGCAT 59.809 39.130 0.00 0.00 0.00 3.96
1716 2067 3.545078 GCTCGCTAAAATTGAACTGCATG 59.455 43.478 0.00 0.00 0.00 4.06
1717 2068 3.500982 TCGCTAAAATTGAACTGCATGC 58.499 40.909 11.82 11.82 0.00 4.06
1718 2069 2.599973 CGCTAAAATTGAACTGCATGCC 59.400 45.455 16.68 0.00 0.00 4.40
1719 2070 2.599973 GCTAAAATTGAACTGCATGCCG 59.400 45.455 16.68 12.01 0.00 5.69
1720 2071 1.431496 AAAATTGAACTGCATGCCGC 58.569 45.000 16.68 2.13 42.89 6.53
1721 2072 0.604578 AAATTGAACTGCATGCCGCT 59.395 45.000 16.68 0.00 43.06 5.52
1722 2073 0.171903 AATTGAACTGCATGCCGCTC 59.828 50.000 16.68 10.52 43.06 5.03
1723 2074 1.660560 ATTGAACTGCATGCCGCTCC 61.661 55.000 16.68 2.24 43.06 4.70
1724 2075 3.869272 GAACTGCATGCCGCTCCG 61.869 66.667 16.68 0.00 43.06 4.63
1745 2096 2.579787 CGCGGCGGAGTTACAGAG 60.580 66.667 15.84 0.00 0.00 3.35
1746 2097 2.886124 GCGGCGGAGTTACAGAGC 60.886 66.667 9.78 0.00 0.00 4.09
1747 2098 2.579787 CGGCGGAGTTACAGAGCG 60.580 66.667 0.00 0.00 0.00 5.03
1748 2099 2.202756 GGCGGAGTTACAGAGCGG 60.203 66.667 0.00 0.00 0.00 5.52
1749 2100 2.707849 GGCGGAGTTACAGAGCGGA 61.708 63.158 0.00 0.00 0.00 5.54
1750 2101 1.226717 GCGGAGTTACAGAGCGGAG 60.227 63.158 0.00 0.00 0.00 4.63
1751 2102 1.935327 GCGGAGTTACAGAGCGGAGT 61.935 60.000 0.00 0.00 0.00 3.85
1752 2103 0.179161 CGGAGTTACAGAGCGGAGTG 60.179 60.000 0.00 0.00 0.00 3.51
1753 2104 1.174783 GGAGTTACAGAGCGGAGTGA 58.825 55.000 0.00 0.00 0.00 3.41
1754 2105 1.751924 GGAGTTACAGAGCGGAGTGAT 59.248 52.381 0.00 0.00 0.00 3.06
1755 2106 2.166664 GGAGTTACAGAGCGGAGTGATT 59.833 50.000 0.00 0.00 0.00 2.57
1756 2107 3.440228 GAGTTACAGAGCGGAGTGATTC 58.560 50.000 0.00 0.00 0.00 2.52
1757 2108 2.166664 AGTTACAGAGCGGAGTGATTCC 59.833 50.000 0.00 0.00 43.04 3.01
1764 2115 3.795638 GGAGTGATTCCGAACGGC 58.204 61.111 8.48 0.00 35.91 5.68
1765 2116 1.814169 GGAGTGATTCCGAACGGCC 60.814 63.158 8.48 0.00 35.91 6.13
1766 2117 1.814169 GAGTGATTCCGAACGGCCC 60.814 63.158 8.48 1.07 34.68 5.80
1889 2241 4.056050 ACGACAACACCTAATTGTGAGAC 58.944 43.478 3.12 0.00 40.36 3.36
1905 2257 2.438021 TGAGACTAGCCAAACCAGTTGT 59.562 45.455 0.00 0.00 35.23 3.32
1924 2276 6.527722 CAGTTGTTAAATGTGGACATACATGC 59.472 38.462 0.00 0.00 40.24 4.06
1934 2286 7.304374 ATGTGGACATACATGCTGTTTAGCTT 61.304 38.462 0.00 0.00 41.76 3.74
1935 2287 8.066789 ATGTGGACATACATGCTGTTTAGCTTA 61.067 37.037 0.00 0.00 41.76 3.09
1973 2325 7.917003 AGTACACATGATATAACATATGGCCA 58.083 34.615 8.56 8.56 30.13 5.36
2071 2426 3.880117 GCTTAGGATAACAAGGGCCCAAA 60.880 47.826 27.56 4.01 0.00 3.28
2108 2463 4.082354 ACTGCCGTACTTCGTTTAGAGATT 60.082 41.667 0.00 0.00 37.94 2.40
2116 2471 6.761099 ACTTCGTTTAGAGATTGAGAGCTA 57.239 37.500 0.00 0.00 0.00 3.32
2333 2688 2.026822 AGTTGAGGTCTTCGGCATCAAT 60.027 45.455 0.00 0.00 32.93 2.57
2429 2830 4.768968 CCACAAGAATTTCAAGGAGACCAT 59.231 41.667 0.00 0.00 0.00 3.55
2513 2914 1.734117 TGACATGTCAGCGTCGCAG 60.734 57.895 24.56 12.22 34.14 5.18
2527 2928 2.863740 CGTCGCAGGATTGTATTGCTAA 59.136 45.455 0.00 0.00 35.73 3.09
2532 2933 5.356751 TCGCAGGATTGTATTGCTAATGTTT 59.643 36.000 0.00 0.00 35.73 2.83
2538 2939 6.035975 GGATTGTATTGCTAATGTTTTGGTGC 59.964 38.462 0.00 0.00 0.00 5.01
2542 2943 5.674052 ATTGCTAATGTTTTGGTGCCATA 57.326 34.783 0.00 0.00 0.00 2.74
2552 2953 6.186957 TGTTTTGGTGCCATACTGATCTTAT 58.813 36.000 0.00 0.00 0.00 1.73
2637 3280 6.421202 GCCGTTCCATACTTACATTAAGAGAG 59.579 42.308 0.00 0.00 39.09 3.20
2741 3384 4.099419 ACTGTCCCTTAAGTTGGCAAAAAG 59.901 41.667 0.00 6.39 0.00 2.27
2884 3527 2.360844 GGAGAAGCTTTAGCCTCCAAC 58.639 52.381 21.35 1.00 44.08 3.77
2885 3528 2.290323 GGAGAAGCTTTAGCCTCCAACA 60.290 50.000 21.35 0.00 44.08 3.33
2886 3529 3.615155 GAGAAGCTTTAGCCTCCAACAT 58.385 45.455 0.00 0.00 43.38 2.71
2887 3530 3.350833 AGAAGCTTTAGCCTCCAACATG 58.649 45.455 0.00 0.00 43.38 3.21
2888 3531 2.887151 AGCTTTAGCCTCCAACATGT 57.113 45.000 0.00 0.00 43.38 3.21
2889 3532 2.716217 AGCTTTAGCCTCCAACATGTC 58.284 47.619 0.00 0.00 43.38 3.06
2890 3533 2.040278 AGCTTTAGCCTCCAACATGTCA 59.960 45.455 0.00 0.00 43.38 3.58
2953 3596 1.202188 GCGGCCTTTGCTAAAGATGAC 60.202 52.381 0.00 0.00 41.02 3.06
2993 3636 2.095466 GCAATAGGTTGTTAGCGCACAA 60.095 45.455 11.47 10.04 37.65 3.33
3008 3651 2.078392 GCACAATGGGCAAATTCAAGG 58.922 47.619 1.00 0.00 0.00 3.61
3034 3677 9.959749 GATAGTTCAGACTATAGGTTTTCTCTG 57.040 37.037 4.43 7.03 46.53 3.35
3115 3758 5.409826 GGAAGCAAGGTATGATTAGGATTCG 59.590 44.000 0.00 0.00 37.88 3.34
3144 3790 2.877097 TGCTTAGGAGGCAATCAACA 57.123 45.000 0.00 0.00 36.71 3.33
3145 3791 3.370840 TGCTTAGGAGGCAATCAACAT 57.629 42.857 0.00 0.00 36.71 2.71
3146 3792 4.502105 TGCTTAGGAGGCAATCAACATA 57.498 40.909 0.00 0.00 36.71 2.29
3182 3828 4.833478 AGGATATGTGACAGTGAAGCTT 57.167 40.909 0.00 0.00 0.00 3.74
3297 3943 4.211330 TCTGGGCGGGCCAAAACA 62.211 61.111 24.45 5.95 37.98 2.83
3324 3970 7.332430 GGCCAGGTTAACAAATACCATTAAAAC 59.668 37.037 8.10 0.00 36.87 2.43
3376 4022 4.321718 CTCTTGACTGAAATCTTGCTGGA 58.678 43.478 0.00 0.00 0.00 3.86
3491 4139 6.284459 ACCTGCATTATAGCTTCTTGTACTC 58.716 40.000 0.00 0.00 34.99 2.59
3497 4145 9.134734 GCATTATAGCTTCTTGTACTCATAGTC 57.865 37.037 0.00 0.00 0.00 2.59
3552 4200 3.685139 TGACTCCTTAAAGGTCAGCAG 57.315 47.619 0.00 0.00 36.53 4.24
3771 4423 0.892358 CACAGCAACCCAGAGCATGT 60.892 55.000 0.00 0.00 0.00 3.21
4069 4727 4.996788 ATCCTCAGCCAATTGATGAAAC 57.003 40.909 7.12 0.00 0.00 2.78
4877 5782 0.322187 ACCCAGATTCGGTTTTCGGG 60.322 55.000 0.00 0.00 39.77 5.14
4915 5820 5.335583 GCAAATACCTGTTACTTGTGCATCA 60.336 40.000 0.00 0.00 0.00 3.07
5126 6031 3.125829 CGGAGATTCACATGGAAAGTGTG 59.874 47.826 0.00 0.03 46.36 3.82
5159 6064 1.464997 GTCTTGGATGAAAGTGCCGAC 59.535 52.381 0.00 0.00 0.00 4.79
5405 6320 8.321353 TGTTATTCAGATGAAATGTGGTAGTCT 58.679 33.333 0.00 0.00 38.31 3.24
5406 6321 9.817809 GTTATTCAGATGAAATGTGGTAGTCTA 57.182 33.333 0.00 0.00 38.31 2.59
5505 6420 6.799296 GATGTAATCCTGTCCAGTGTTTGGTA 60.799 42.308 0.00 0.00 42.08 3.25
5699 6641 5.379732 TTTGAGGTTTCACAGTTTTTCGT 57.620 34.783 0.00 0.00 31.71 3.85
5725 6668 9.157104 TGAATACGCAAAATTCTGTGTATCTTA 57.843 29.630 16.28 5.63 47.00 2.10
5727 6670 6.795098 ACGCAAAATTCTGTGTATCTTACA 57.205 33.333 0.00 0.00 38.25 2.41
5770 6721 8.944138 TGTGTATTTTCCCATTGATATAGGAGA 58.056 33.333 0.00 0.00 0.00 3.71
5796 6747 4.383770 CGGAGGTTTACACACTTGGGATAT 60.384 45.833 0.00 0.00 0.00 1.63
5798 6749 5.497474 GAGGTTTACACACTTGGGATATGT 58.503 41.667 0.00 0.00 0.00 2.29
5799 6750 5.887754 AGGTTTACACACTTGGGATATGTT 58.112 37.500 0.00 0.00 0.00 2.71
5800 6751 6.311735 AGGTTTACACACTTGGGATATGTTT 58.688 36.000 0.00 0.00 0.00 2.83
5801 6752 6.780522 AGGTTTACACACTTGGGATATGTTTT 59.219 34.615 0.00 0.00 0.00 2.43
5802 6753 7.289084 AGGTTTACACACTTGGGATATGTTTTT 59.711 33.333 0.00 0.00 0.00 1.94
5823 6774 5.766150 TTTTTGAGACATACACACTTGGG 57.234 39.130 0.00 0.00 0.00 4.12
5824 6775 4.698201 TTTGAGACATACACACTTGGGA 57.302 40.909 0.00 0.00 0.00 4.37
5828 6779 4.142249 TGAGACATACACACTTGGGATACG 60.142 45.833 0.00 0.00 37.60 3.06
5833 6784 3.308438 ACACACTTGGGATACGTACAC 57.692 47.619 0.00 0.00 37.60 2.90
5834 6785 2.256174 CACACTTGGGATACGTACACG 58.744 52.381 0.00 0.00 46.33 4.49
5852 6803 6.089820 CGTACACGTACAAATGGAATAACTGT 59.910 38.462 8.02 0.00 35.87 3.55
5867 6858 2.831685 ACTGTAAGCATCAACGTCCA 57.168 45.000 0.00 0.00 37.60 4.02
5868 6859 2.688507 ACTGTAAGCATCAACGTCCAG 58.311 47.619 0.00 0.00 37.60 3.86
5869 6860 1.394917 CTGTAAGCATCAACGTCCAGC 59.605 52.381 0.00 0.00 0.00 4.85
5871 6862 0.245266 TAAGCATCAACGTCCAGCGA 59.755 50.000 0.00 0.00 44.77 4.93
5872 6863 0.391661 AAGCATCAACGTCCAGCGAT 60.392 50.000 0.00 0.00 44.77 4.58
5873 6864 1.086067 AGCATCAACGTCCAGCGATG 61.086 55.000 0.00 0.00 44.77 3.84
5876 6867 2.593468 ATCAACGTCCAGCGATGGGG 62.593 60.000 21.53 14.79 42.53 4.96
5877 6868 3.000819 AACGTCCAGCGATGGGGA 61.001 61.111 21.53 0.00 44.77 4.81
5878 6869 2.367202 AACGTCCAGCGATGGGGAT 61.367 57.895 21.53 4.15 44.77 3.85
5880 6871 1.153168 CGTCCAGCGATGGGGATTT 60.153 57.895 21.53 0.00 44.77 2.17
5881 6872 0.105964 CGTCCAGCGATGGGGATTTA 59.894 55.000 21.53 0.00 44.77 1.40
5886 6877 3.117701 TCCAGCGATGGGGATTTATTTCA 60.118 43.478 21.53 0.00 0.00 2.69
5887 6878 3.254166 CCAGCGATGGGGATTTATTTCAG 59.746 47.826 13.14 0.00 0.00 3.02
5888 6879 3.254166 CAGCGATGGGGATTTATTTCAGG 59.746 47.826 0.00 0.00 0.00 3.86
5890 6881 4.082125 GCGATGGGGATTTATTTCAGGAT 58.918 43.478 0.00 0.00 0.00 3.24
5891 6882 4.524328 GCGATGGGGATTTATTTCAGGATT 59.476 41.667 0.00 0.00 0.00 3.01
5892 6883 5.011023 GCGATGGGGATTTATTTCAGGATTT 59.989 40.000 0.00 0.00 0.00 2.17
5893 6884 6.681777 CGATGGGGATTTATTTCAGGATTTC 58.318 40.000 0.00 0.00 0.00 2.17
5894 6885 6.294731 CGATGGGGATTTATTTCAGGATTTCC 60.295 42.308 0.00 0.00 0.00 3.13
5904 6895 2.785868 AGGATTTCCTGCGATGTGC 58.214 52.632 0.00 0.00 46.55 4.57
5914 6905 3.723347 GCGATGTGCATTCGATGAG 57.277 52.632 21.69 0.00 45.45 2.90
5915 6906 0.234106 GCGATGTGCATTCGATGAGG 59.766 55.000 21.69 0.00 45.45 3.86
5916 6907 1.856802 CGATGTGCATTCGATGAGGA 58.143 50.000 14.71 0.00 0.00 3.71
5917 6908 1.791204 CGATGTGCATTCGATGAGGAG 59.209 52.381 14.71 0.00 0.00 3.69
5918 6909 2.544486 CGATGTGCATTCGATGAGGAGA 60.544 50.000 14.71 0.00 0.00 3.71
5919 6910 2.299993 TGTGCATTCGATGAGGAGAC 57.700 50.000 0.00 0.00 0.00 3.36
5920 6911 1.203928 GTGCATTCGATGAGGAGACG 58.796 55.000 0.00 0.00 0.00 4.18
5921 6912 0.817654 TGCATTCGATGAGGAGACGT 59.182 50.000 0.00 0.00 0.00 4.34
5922 6913 1.204704 TGCATTCGATGAGGAGACGTT 59.795 47.619 0.00 0.00 0.00 3.99
5923 6914 2.271800 GCATTCGATGAGGAGACGTTT 58.728 47.619 0.00 0.00 0.00 3.60
5924 6915 2.282820 GCATTCGATGAGGAGACGTTTC 59.717 50.000 0.00 0.00 0.00 2.78
5925 6916 3.775202 CATTCGATGAGGAGACGTTTCT 58.225 45.455 6.02 0.00 33.37 2.52
5926 6917 2.921634 TCGATGAGGAGACGTTTCTG 57.078 50.000 6.02 0.00 29.47 3.02
5927 6918 2.160205 TCGATGAGGAGACGTTTCTGT 58.840 47.619 6.02 0.00 29.47 3.41
5928 6919 2.161808 TCGATGAGGAGACGTTTCTGTC 59.838 50.000 6.02 4.35 39.21 3.51
5929 6920 2.520979 GATGAGGAGACGTTTCTGTCG 58.479 52.381 6.02 0.00 43.70 4.35
5930 6921 1.601166 TGAGGAGACGTTTCTGTCGA 58.399 50.000 6.02 0.00 43.70 4.20
5931 6922 1.266175 TGAGGAGACGTTTCTGTCGAC 59.734 52.381 9.11 9.11 43.70 4.20
5932 6923 0.237761 AGGAGACGTTTCTGTCGACG 59.762 55.000 11.62 6.07 43.70 5.12
5933 6924 0.236711 GGAGACGTTTCTGTCGACGA 59.763 55.000 11.62 8.49 43.70 4.20
5934 6925 1.316414 GAGACGTTTCTGTCGACGAC 58.684 55.000 20.97 20.97 43.70 4.34
5935 6926 0.383983 AGACGTTTCTGTCGACGACG 60.384 55.000 22.06 22.91 43.70 5.12
5936 6927 0.383491 GACGTTTCTGTCGACGACGA 60.383 55.000 27.94 18.27 46.56 4.20
5944 6935 2.125952 TCGACGACGAGACGCCTA 60.126 61.111 5.75 0.00 43.81 3.93
5945 6936 2.021106 CGACGACGAGACGCCTAC 59.979 66.667 0.00 0.00 42.66 3.18
5946 6937 2.733671 CGACGACGAGACGCCTACA 61.734 63.158 0.00 0.00 42.66 2.74
5947 6938 1.060622 GACGACGAGACGCCTACAG 59.939 63.158 0.00 0.00 36.70 2.74
5948 6939 1.633852 GACGACGAGACGCCTACAGT 61.634 60.000 0.00 0.00 36.70 3.55
5949 6940 1.226046 CGACGAGACGCCTACAGTG 60.226 63.158 0.00 0.00 0.00 3.66
5950 6941 1.632948 CGACGAGACGCCTACAGTGA 61.633 60.000 0.00 0.00 0.00 3.41
5951 6942 0.179194 GACGAGACGCCTACAGTGAC 60.179 60.000 0.00 0.00 0.00 3.67
5952 6943 0.605860 ACGAGACGCCTACAGTGACT 60.606 55.000 0.00 0.00 33.56 3.41
5953 6944 0.522180 CGAGACGCCTACAGTGACTT 59.478 55.000 0.00 0.00 30.94 3.01
5954 6945 1.466024 CGAGACGCCTACAGTGACTTC 60.466 57.143 0.00 0.00 30.94 3.01
5955 6946 0.522180 AGACGCCTACAGTGACTTCG 59.478 55.000 0.00 0.00 0.00 3.79
5956 6947 0.240411 GACGCCTACAGTGACTTCGT 59.760 55.000 0.00 0.83 0.00 3.85
5957 6948 0.039437 ACGCCTACAGTGACTTCGTG 60.039 55.000 0.00 0.00 0.00 4.35
5958 6949 0.240145 CGCCTACAGTGACTTCGTGA 59.760 55.000 0.00 0.00 0.00 4.35
5959 6950 1.335597 CGCCTACAGTGACTTCGTGAA 60.336 52.381 0.00 0.00 0.00 3.18
5960 6951 2.671351 CGCCTACAGTGACTTCGTGAAT 60.671 50.000 0.00 0.00 0.00 2.57
5961 6952 2.924290 GCCTACAGTGACTTCGTGAATC 59.076 50.000 0.00 0.00 0.00 2.52
5962 6953 3.367498 GCCTACAGTGACTTCGTGAATCT 60.367 47.826 0.00 0.00 0.00 2.40
5963 6954 4.416620 CCTACAGTGACTTCGTGAATCTC 58.583 47.826 0.00 0.00 0.00 2.75
5964 6955 4.082733 CCTACAGTGACTTCGTGAATCTCA 60.083 45.833 0.00 0.00 0.00 3.27
5965 6956 4.322080 ACAGTGACTTCGTGAATCTCAA 57.678 40.909 0.00 0.00 0.00 3.02
5966 6957 4.302455 ACAGTGACTTCGTGAATCTCAAG 58.698 43.478 0.00 0.00 0.00 3.02
5967 6958 4.038042 ACAGTGACTTCGTGAATCTCAAGA 59.962 41.667 0.00 0.00 33.23 3.02
5968 6959 5.167121 CAGTGACTTCGTGAATCTCAAGAT 58.833 41.667 0.00 0.00 35.00 2.40
5969 6960 5.061933 CAGTGACTTCGTGAATCTCAAGATG 59.938 44.000 0.00 4.66 35.00 2.90
5970 6961 5.047731 AGTGACTTCGTGAATCTCAAGATGA 60.048 40.000 10.79 0.00 35.00 2.92
5971 6962 5.809562 GTGACTTCGTGAATCTCAAGATGAT 59.190 40.000 10.79 0.00 35.00 2.45
5972 6963 6.975197 GTGACTTCGTGAATCTCAAGATGATA 59.025 38.462 10.79 0.39 35.00 2.15
5973 6964 7.651304 GTGACTTCGTGAATCTCAAGATGATAT 59.349 37.037 10.79 0.00 35.00 1.63
5974 6965 7.650903 TGACTTCGTGAATCTCAAGATGATATG 59.349 37.037 10.79 0.00 35.00 1.78
5975 6966 6.423302 ACTTCGTGAATCTCAAGATGATATGC 59.577 38.462 10.79 0.00 35.00 3.14
5976 6967 5.233225 TCGTGAATCTCAAGATGATATGCC 58.767 41.667 0.00 0.00 34.49 4.40
5977 6968 4.091075 CGTGAATCTCAAGATGATATGCCG 59.909 45.833 0.00 0.00 34.49 5.69
5978 6969 4.391216 GTGAATCTCAAGATGATATGCCGG 59.609 45.833 0.00 0.00 34.49 6.13
5979 6970 4.040829 TGAATCTCAAGATGATATGCCGGT 59.959 41.667 1.90 0.00 34.49 5.28
5980 6971 4.630644 ATCTCAAGATGATATGCCGGTT 57.369 40.909 1.90 0.00 32.68 4.44
5981 6972 3.995199 TCTCAAGATGATATGCCGGTTC 58.005 45.455 1.90 0.00 0.00 3.62
5982 6973 3.387699 TCTCAAGATGATATGCCGGTTCA 59.612 43.478 1.90 1.91 0.00 3.18
5983 6974 3.732212 TCAAGATGATATGCCGGTTCAG 58.268 45.455 1.90 0.00 0.00 3.02
5984 6975 3.134623 TCAAGATGATATGCCGGTTCAGT 59.865 43.478 1.90 0.00 0.00 3.41
5985 6976 3.393089 AGATGATATGCCGGTTCAGTC 57.607 47.619 1.90 0.00 0.00 3.51
5986 6977 2.968574 AGATGATATGCCGGTTCAGTCT 59.031 45.455 1.90 4.63 0.00 3.24
5987 6978 2.890808 TGATATGCCGGTTCAGTCTC 57.109 50.000 1.90 0.00 0.00 3.36
5988 6979 2.388735 TGATATGCCGGTTCAGTCTCT 58.611 47.619 1.90 0.00 0.00 3.10
5989 6980 2.362397 TGATATGCCGGTTCAGTCTCTC 59.638 50.000 1.90 0.00 0.00 3.20
5990 6981 0.738975 TATGCCGGTTCAGTCTCTCG 59.261 55.000 1.90 0.00 0.00 4.04
5991 6982 1.949847 ATGCCGGTTCAGTCTCTCGG 61.950 60.000 1.90 0.00 43.13 4.63
5992 6983 2.341101 GCCGGTTCAGTCTCTCGGA 61.341 63.158 1.90 0.00 42.94 4.55
5993 6984 1.803943 CCGGTTCAGTCTCTCGGAG 59.196 63.158 0.00 0.00 42.94 4.63
5994 6985 1.658686 CCGGTTCAGTCTCTCGGAGG 61.659 65.000 4.96 0.00 42.94 4.30
5995 6986 0.961358 CGGTTCAGTCTCTCGGAGGT 60.961 60.000 4.96 0.00 0.00 3.85
5996 6987 0.528470 GGTTCAGTCTCTCGGAGGTG 59.472 60.000 4.96 0.00 0.00 4.00
5997 6988 1.249407 GTTCAGTCTCTCGGAGGTGT 58.751 55.000 4.96 0.00 0.00 4.16
5998 6989 1.614413 GTTCAGTCTCTCGGAGGTGTT 59.386 52.381 4.96 0.00 0.00 3.32
5999 6990 1.996798 TCAGTCTCTCGGAGGTGTTT 58.003 50.000 4.96 0.00 0.00 2.83
6000 6991 3.150458 TCAGTCTCTCGGAGGTGTTTA 57.850 47.619 4.96 0.00 0.00 2.01
6001 6992 3.698289 TCAGTCTCTCGGAGGTGTTTAT 58.302 45.455 4.96 0.00 0.00 1.40
6002 6993 4.851843 TCAGTCTCTCGGAGGTGTTTATA 58.148 43.478 4.96 0.00 0.00 0.98
6003 6994 4.882427 TCAGTCTCTCGGAGGTGTTTATAG 59.118 45.833 4.96 0.00 0.00 1.31
6004 6995 4.036971 CAGTCTCTCGGAGGTGTTTATAGG 59.963 50.000 4.96 0.00 0.00 2.57
6005 6996 3.318557 GTCTCTCGGAGGTGTTTATAGGG 59.681 52.174 4.96 0.00 0.00 3.53
6006 6997 2.628657 CTCTCGGAGGTGTTTATAGGGG 59.371 54.545 4.96 0.00 0.00 4.79
6007 6998 2.023695 TCTCGGAGGTGTTTATAGGGGT 60.024 50.000 4.96 0.00 0.00 4.95
6008 6999 3.205056 TCTCGGAGGTGTTTATAGGGGTA 59.795 47.826 4.96 0.00 0.00 3.69
6009 7000 3.569491 TCGGAGGTGTTTATAGGGGTAG 58.431 50.000 0.00 0.00 0.00 3.18
6010 7001 3.052642 TCGGAGGTGTTTATAGGGGTAGT 60.053 47.826 0.00 0.00 0.00 2.73
6011 7002 3.069158 CGGAGGTGTTTATAGGGGTAGTG 59.931 52.174 0.00 0.00 0.00 2.74
6012 7003 4.035814 GGAGGTGTTTATAGGGGTAGTGT 58.964 47.826 0.00 0.00 0.00 3.55
6013 7004 4.141779 GGAGGTGTTTATAGGGGTAGTGTG 60.142 50.000 0.00 0.00 0.00 3.82
6014 7005 4.432316 AGGTGTTTATAGGGGTAGTGTGT 58.568 43.478 0.00 0.00 0.00 3.72
6015 7006 4.224370 AGGTGTTTATAGGGGTAGTGTGTG 59.776 45.833 0.00 0.00 0.00 3.82
6016 7007 4.019950 GGTGTTTATAGGGGTAGTGTGTGT 60.020 45.833 0.00 0.00 0.00 3.72
6017 7008 4.933400 GTGTTTATAGGGGTAGTGTGTGTG 59.067 45.833 0.00 0.00 0.00 3.82
6018 7009 3.899052 TTATAGGGGTAGTGTGTGTGC 57.101 47.619 0.00 0.00 0.00 4.57
6019 7010 0.535335 ATAGGGGTAGTGTGTGTGCG 59.465 55.000 0.00 0.00 0.00 5.34
6020 7011 2.162338 TAGGGGTAGTGTGTGTGCGC 62.162 60.000 0.00 0.00 0.00 6.09
6021 7012 3.411351 GGGTAGTGTGTGTGCGCG 61.411 66.667 0.00 0.00 0.00 6.86
6022 7013 4.072088 GGTAGTGTGTGTGCGCGC 62.072 66.667 27.26 27.26 35.99 6.86
6023 7014 4.409588 GTAGTGTGTGTGCGCGCG 62.410 66.667 28.44 28.44 40.26 6.86
6024 7015 4.934942 TAGTGTGTGTGCGCGCGT 62.935 61.111 32.35 10.56 40.26 6.01
6026 7017 4.879686 GTGTGTGTGCGCGCGTTT 62.880 61.111 32.35 0.00 0.00 3.60
6027 7018 3.262686 TGTGTGTGCGCGCGTTTA 61.263 55.556 32.35 15.53 0.00 2.01
6028 7019 2.172419 GTGTGTGCGCGCGTTTAT 59.828 55.556 32.35 0.00 0.00 1.40
6029 7020 1.282930 TGTGTGTGCGCGCGTTTATA 61.283 50.000 32.35 13.60 0.00 0.98
6030 7021 0.179245 GTGTGTGCGCGCGTTTATAA 60.179 50.000 32.35 10.40 0.00 0.98
6031 7022 0.093875 TGTGTGCGCGCGTTTATAAG 59.906 50.000 32.35 0.04 0.00 1.73
6032 7023 0.585519 GTGTGCGCGCGTTTATAAGG 60.586 55.000 32.35 0.00 0.00 2.69
6033 7024 1.011574 GTGCGCGCGTTTATAAGGG 60.012 57.895 32.35 0.00 0.00 3.95
6034 7025 1.448189 TGCGCGCGTTTATAAGGGT 60.448 52.632 32.35 0.00 0.00 4.34
6035 7026 0.179116 TGCGCGCGTTTATAAGGGTA 60.179 50.000 32.35 0.00 0.00 3.69
6036 7027 0.929615 GCGCGCGTTTATAAGGGTAA 59.070 50.000 32.35 0.00 0.00 2.85
6037 7028 1.071041 GCGCGCGTTTATAAGGGTAAG 60.071 52.381 32.35 0.00 0.00 2.34
6038 7029 1.071041 CGCGCGTTTATAAGGGTAAGC 60.071 52.381 24.19 0.00 0.00 3.09
6039 7030 2.916735 CGCGTTTATAAGGGTAAGCG 57.083 50.000 0.00 1.81 40.01 4.68
6040 7031 2.195922 CGCGTTTATAAGGGTAAGCGT 58.804 47.619 0.00 0.00 39.47 5.07
6041 7032 3.371168 CGCGTTTATAAGGGTAAGCGTA 58.629 45.455 0.00 0.00 39.47 4.42
6042 7033 3.983344 CGCGTTTATAAGGGTAAGCGTAT 59.017 43.478 0.00 0.00 39.47 3.06
6043 7034 4.143473 CGCGTTTATAAGGGTAAGCGTATG 60.143 45.833 0.00 0.00 39.47 2.39
6044 7035 4.376717 GCGTTTATAAGGGTAAGCGTATGC 60.377 45.833 0.00 0.00 39.47 3.14
6058 7049 3.348795 CGTATGCGCGTTTATATGACC 57.651 47.619 7.78 0.00 0.00 4.02
6059 7050 2.222202 CGTATGCGCGTTTATATGACCG 60.222 50.000 7.78 1.39 0.00 4.79
6060 7051 0.511221 ATGCGCGTTTATATGACCGC 59.489 50.000 8.43 0.00 42.53 5.68
6061 7052 0.528901 TGCGCGTTTATATGACCGCT 60.529 50.000 8.43 0.00 43.70 5.52
6062 7053 0.580104 GCGCGTTTATATGACCGCTT 59.420 50.000 8.43 0.00 43.70 4.68
6063 7054 1.656429 GCGCGTTTATATGACCGCTTG 60.656 52.381 8.43 0.00 43.70 4.01
6064 7055 1.656429 CGCGTTTATATGACCGCTTGC 60.656 52.381 7.76 0.00 43.70 4.01
6065 7056 1.329292 GCGTTTATATGACCGCTTGCA 59.671 47.619 2.07 0.00 42.66 4.08
6066 7057 2.032030 GCGTTTATATGACCGCTTGCAT 60.032 45.455 2.07 0.00 42.66 3.96
6067 7058 3.799035 CGTTTATATGACCGCTTGCATC 58.201 45.455 0.00 0.00 0.00 3.91
6068 7059 3.494626 CGTTTATATGACCGCTTGCATCT 59.505 43.478 0.00 0.00 0.00 2.90
6069 7060 4.609113 CGTTTATATGACCGCTTGCATCTG 60.609 45.833 0.00 0.00 0.00 2.90
6070 7061 2.627515 ATATGACCGCTTGCATCTGT 57.372 45.000 0.00 0.00 0.00 3.41
6071 7062 3.751479 ATATGACCGCTTGCATCTGTA 57.249 42.857 0.00 0.00 0.00 2.74
6072 7063 1.656652 ATGACCGCTTGCATCTGTAC 58.343 50.000 0.00 0.00 0.00 2.90
6073 7064 0.735978 TGACCGCTTGCATCTGTACG 60.736 55.000 0.00 0.00 0.00 3.67
6074 7065 1.421410 GACCGCTTGCATCTGTACGG 61.421 60.000 0.00 0.00 45.86 4.02
6075 7066 1.447838 CCGCTTGCATCTGTACGGT 60.448 57.895 0.64 0.00 35.99 4.83
6076 7067 1.695893 CCGCTTGCATCTGTACGGTG 61.696 60.000 0.64 1.03 35.99 4.94
6077 7068 1.014044 CGCTTGCATCTGTACGGTGT 61.014 55.000 0.64 0.00 0.00 4.16
6078 7069 1.156736 GCTTGCATCTGTACGGTGTT 58.843 50.000 0.64 0.00 0.00 3.32
6079 7070 2.343101 GCTTGCATCTGTACGGTGTTA 58.657 47.619 0.64 0.00 0.00 2.41
6080 7071 2.739913 GCTTGCATCTGTACGGTGTTAA 59.260 45.455 0.64 0.46 0.00 2.01
6081 7072 3.187637 GCTTGCATCTGTACGGTGTTAAA 59.812 43.478 0.64 0.00 0.00 1.52
6082 7073 4.319911 GCTTGCATCTGTACGGTGTTAAAA 60.320 41.667 0.64 0.00 0.00 1.52
6083 7074 5.752892 TTGCATCTGTACGGTGTTAAAAA 57.247 34.783 0.64 0.00 0.00 1.94
6102 7093 1.560505 AAAATGTCCCAGTGATGCCC 58.439 50.000 0.00 0.00 0.00 5.36
6103 7094 0.680921 AAATGTCCCAGTGATGCCCG 60.681 55.000 0.00 0.00 0.00 6.13
6104 7095 2.556840 AATGTCCCAGTGATGCCCGG 62.557 60.000 0.00 0.00 0.00 5.73
6120 7111 4.540153 GGCTGCCGATTTCTAGCA 57.460 55.556 1.35 0.00 37.89 3.49
6121 7112 3.012560 GGCTGCCGATTTCTAGCAT 57.987 52.632 1.35 0.00 37.89 3.79
6122 7113 1.312815 GGCTGCCGATTTCTAGCATT 58.687 50.000 1.35 0.00 37.89 3.56
6123 7114 1.678101 GGCTGCCGATTTCTAGCATTT 59.322 47.619 1.35 0.00 37.89 2.32
6124 7115 2.878406 GGCTGCCGATTTCTAGCATTTA 59.122 45.455 1.35 0.00 37.89 1.40
6125 7116 3.304057 GGCTGCCGATTTCTAGCATTTAC 60.304 47.826 1.35 0.00 37.89 2.01
6126 7117 3.604772 GCTGCCGATTTCTAGCATTTACG 60.605 47.826 0.00 0.00 35.64 3.18
6127 7118 2.286833 TGCCGATTTCTAGCATTTACGC 59.713 45.455 0.00 0.00 0.00 4.42
6229 7220 3.601435 GGCTTCTTCTCTTCTACCAACC 58.399 50.000 0.00 0.00 0.00 3.77
6230 7221 3.601435 GCTTCTTCTCTTCTACCAACCC 58.399 50.000 0.00 0.00 0.00 4.11
6294 7297 2.477176 CGAGAGCAGAGGAGACGGG 61.477 68.421 0.00 0.00 0.00 5.28
6315 7318 4.507869 GGGGGTTCTTTGCTAGGTTTTAGA 60.508 45.833 0.00 0.00 0.00 2.10
6627 7630 2.026590 ACCAACGACGACCACGAC 59.973 61.111 0.00 0.00 42.66 4.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 1.828461 TTGCATCAACGTCCGGGGTA 61.828 55.000 0.00 0.00 0.00 3.69
46 48 1.526917 CCCCCTCCTATGCGCAAAG 60.527 63.158 17.11 9.86 0.00 2.77
47 49 1.983119 CTCCCCCTCCTATGCGCAAA 61.983 60.000 17.11 0.00 0.00 3.68
48 50 2.366301 TCCCCCTCCTATGCGCAA 60.366 61.111 17.11 2.72 0.00 4.85
49 51 2.679619 ATCTCCCCCTCCTATGCGCA 62.680 60.000 14.96 14.96 0.00 6.09
50 52 1.915769 ATCTCCCCCTCCTATGCGC 60.916 63.158 0.00 0.00 0.00 6.09
51 53 0.542938 TCATCTCCCCCTCCTATGCG 60.543 60.000 0.00 0.00 0.00 4.73
52 54 1.963985 ATCATCTCCCCCTCCTATGC 58.036 55.000 0.00 0.00 0.00 3.14
53 55 5.330648 AAAAATCATCTCCCCCTCCTATG 57.669 43.478 0.00 0.00 0.00 2.23
97 99 7.110155 CACCAACTTTACAGTATAAGTCCCAT 58.890 38.462 7.97 0.00 33.66 4.00
118 120 8.927411 TCTGAATCATTAGAGATTGATACACCA 58.073 33.333 0.00 0.00 38.30 4.17
165 167 5.107133 TGAAGATTTCGTTATCGTCCCTTC 58.893 41.667 10.77 0.00 33.72 3.46
180 182 8.997323 CAACTGTTTATCTGTCTCTGAAGATTT 58.003 33.333 0.00 0.00 34.91 2.17
216 478 4.591321 TGCCCTATCAACCTCTGAAAAT 57.409 40.909 0.00 0.00 37.67 1.82
311 573 7.506971 TCTCATCAGCTTCATAGATTGAACAT 58.493 34.615 0.00 0.00 39.44 2.71
318 580 6.985645 GTGTTTCTCTCATCAGCTTCATAGAT 59.014 38.462 0.00 0.00 0.00 1.98
332 594 0.106708 AAGCGCCAGTGTTTCTCTCA 59.893 50.000 2.29 0.00 0.00 3.27
340 602 2.770164 AGATTAAGAAGCGCCAGTGT 57.230 45.000 2.29 0.00 0.00 3.55
414 676 7.337689 CCATCAGTGTTAATCTTCATCCTTTCA 59.662 37.037 0.00 0.00 0.00 2.69
418 680 6.319048 ACCATCAGTGTTAATCTTCATCCT 57.681 37.500 0.00 0.00 0.00 3.24
463 725 3.706373 CCCTCCCACACCTCCACG 61.706 72.222 0.00 0.00 0.00 4.94
552 815 2.917343 GCAAAAATAACAGAGCTTCGGC 59.083 45.455 0.00 0.00 42.17 5.54
559 822 5.117592 CCGAAGCTTTGCAAAAATAACAGAG 59.882 40.000 13.84 0.00 0.00 3.35
585 864 4.807834 TCTCGACGACGACTTTATCATAGT 59.192 41.667 5.75 0.00 43.81 2.12
625 904 1.069973 CGCGAGTTGCAGAAATTGACA 60.070 47.619 0.00 0.00 46.97 3.58
644 923 0.034059 ACAGCTGGAAGAACCTGACG 59.966 55.000 19.93 0.00 39.52 4.35
646 925 1.070758 GTGACAGCTGGAAGAACCTGA 59.929 52.381 19.93 0.00 39.52 3.86
726 1005 4.358851 TCGCAAAAAGATGGACAACAAAG 58.641 39.130 0.00 0.00 0.00 2.77
731 1010 4.215399 CCTACTTCGCAAAAAGATGGACAA 59.785 41.667 0.00 0.00 0.00 3.18
734 1013 2.747446 GCCTACTTCGCAAAAAGATGGA 59.253 45.455 0.00 0.00 0.00 3.41
744 1023 0.824109 ATGTGCTAGCCTACTTCGCA 59.176 50.000 13.29 0.00 0.00 5.10
745 1024 1.594862 CAATGTGCTAGCCTACTTCGC 59.405 52.381 13.29 0.00 0.00 4.70
746 1025 2.159099 TCCAATGTGCTAGCCTACTTCG 60.159 50.000 13.29 0.00 0.00 3.79
747 1026 3.462021 CTCCAATGTGCTAGCCTACTTC 58.538 50.000 13.29 0.00 0.00 3.01
748 1027 2.171448 CCTCCAATGTGCTAGCCTACTT 59.829 50.000 13.29 0.00 0.00 2.24
749 1028 1.765314 CCTCCAATGTGCTAGCCTACT 59.235 52.381 13.29 0.00 0.00 2.57
750 1029 1.486726 ACCTCCAATGTGCTAGCCTAC 59.513 52.381 13.29 5.15 0.00 3.18
751 1030 1.486310 CACCTCCAATGTGCTAGCCTA 59.514 52.381 13.29 0.72 0.00 3.93
752 1031 0.254178 CACCTCCAATGTGCTAGCCT 59.746 55.000 13.29 0.00 0.00 4.58
753 1032 0.253044 TCACCTCCAATGTGCTAGCC 59.747 55.000 13.29 4.15 33.71 3.93
754 1033 1.339055 TGTCACCTCCAATGTGCTAGC 60.339 52.381 8.10 8.10 33.71 3.42
755 1034 2.234661 TCTGTCACCTCCAATGTGCTAG 59.765 50.000 0.00 0.00 33.71 3.42
756 1035 2.234661 CTCTGTCACCTCCAATGTGCTA 59.765 50.000 0.00 0.00 33.71 3.49
757 1036 1.002888 CTCTGTCACCTCCAATGTGCT 59.997 52.381 0.00 0.00 33.71 4.40
758 1037 1.271054 ACTCTGTCACCTCCAATGTGC 60.271 52.381 0.00 0.00 33.71 4.57
759 1038 2.420642 CACTCTGTCACCTCCAATGTG 58.579 52.381 0.00 0.00 35.01 3.21
760 1039 1.271054 GCACTCTGTCACCTCCAATGT 60.271 52.381 0.00 0.00 0.00 2.71
761 1040 1.002888 AGCACTCTGTCACCTCCAATG 59.997 52.381 0.00 0.00 0.00 2.82
762 1041 1.002888 CAGCACTCTGTCACCTCCAAT 59.997 52.381 0.00 0.00 35.61 3.16
763 1042 0.394192 CAGCACTCTGTCACCTCCAA 59.606 55.000 0.00 0.00 35.61 3.53
764 1043 1.475169 CCAGCACTCTGTCACCTCCA 61.475 60.000 0.00 0.00 38.66 3.86
765 1044 1.188219 TCCAGCACTCTGTCACCTCC 61.188 60.000 0.00 0.00 38.66 4.30
766 1045 0.901124 ATCCAGCACTCTGTCACCTC 59.099 55.000 0.00 0.00 38.66 3.85
767 1046 2.106566 CTATCCAGCACTCTGTCACCT 58.893 52.381 0.00 0.00 38.66 4.00
768 1047 2.103373 TCTATCCAGCACTCTGTCACC 58.897 52.381 0.00 0.00 38.66 4.02
769 1048 4.099266 AGAATCTATCCAGCACTCTGTCAC 59.901 45.833 0.00 0.00 38.66 3.67
796 1075 5.465724 CGCAAGTTACAAGAAAACTAGGAGT 59.534 40.000 0.00 0.00 36.17 3.85
797 1076 5.694910 TCGCAAGTTACAAGAAAACTAGGAG 59.305 40.000 0.00 0.00 36.17 3.69
798 1077 5.603596 TCGCAAGTTACAAGAAAACTAGGA 58.396 37.500 0.00 0.00 36.17 2.94
820 1099 2.425143 TCAACCATCCCAGCAGAATC 57.575 50.000 0.00 0.00 0.00 2.52
821 1100 2.024655 ACATCAACCATCCCAGCAGAAT 60.025 45.455 0.00 0.00 0.00 2.40
822 1101 1.355381 ACATCAACCATCCCAGCAGAA 59.645 47.619 0.00 0.00 0.00 3.02
824 1103 1.475280 CAACATCAACCATCCCAGCAG 59.525 52.381 0.00 0.00 0.00 4.24
825 1104 1.075212 TCAACATCAACCATCCCAGCA 59.925 47.619 0.00 0.00 0.00 4.41
826 1105 1.838112 TCAACATCAACCATCCCAGC 58.162 50.000 0.00 0.00 0.00 4.85
897 1218 1.067821 GGGATAAGAGACTGCCGACTG 59.932 57.143 0.00 0.00 0.00 3.51
911 1258 2.185867 GGTGCTCGCGTGGGATAA 59.814 61.111 5.77 0.00 0.00 1.75
912 1259 4.201679 CGGTGCTCGCGTGGGATA 62.202 66.667 5.77 0.00 0.00 2.59
956 1303 2.484602 GGTGGTAGGGAGTGGGAATTA 58.515 52.381 0.00 0.00 0.00 1.40
1054 1402 3.449227 CGGTGAGGACGCCAGCTA 61.449 66.667 0.00 0.00 46.01 3.32
1159 1507 1.187087 AACCTGATCCCGAGAGTGAC 58.813 55.000 0.00 0.00 0.00 3.67
1310 1658 8.801913 CATTACGATACATCATAGTAGCACATG 58.198 37.037 0.00 0.00 31.05 3.21
1418 1769 5.295292 GCTAGCATACAGAACATGTTGTGAT 59.705 40.000 34.71 22.36 39.96 3.06
1451 1802 6.536224 GCATAATCCCAAAGATGAAAAACAGG 59.464 38.462 0.00 0.00 34.56 4.00
1503 1854 1.548269 CAAAAGGAAGGCCGGCATTAA 59.452 47.619 28.47 0.00 39.96 1.40
1504 1855 1.181786 CAAAAGGAAGGCCGGCATTA 58.818 50.000 28.47 0.00 39.96 1.90
1595 1946 7.654923 GGTTGTTTACTGGCCATATAGTAGTAC 59.345 40.741 5.51 7.90 31.62 2.73
1625 1976 2.280628 GATTCCCGAACACAGCCTTAG 58.719 52.381 0.00 0.00 0.00 2.18
1626 1977 1.065709 GGATTCCCGAACACAGCCTTA 60.066 52.381 0.00 0.00 0.00 2.69
1627 1978 0.322546 GGATTCCCGAACACAGCCTT 60.323 55.000 0.00 0.00 0.00 4.35
1628 1979 1.201429 AGGATTCCCGAACACAGCCT 61.201 55.000 0.00 0.00 37.58 4.58
1629 1980 0.744771 GAGGATTCCCGAACACAGCC 60.745 60.000 0.00 0.00 37.58 4.85
1630 1981 0.250513 AGAGGATTCCCGAACACAGC 59.749 55.000 0.00 0.00 37.58 4.40
1631 1982 2.009042 GCAGAGGATTCCCGAACACAG 61.009 57.143 0.00 0.00 37.58 3.66
1632 1983 0.036388 GCAGAGGATTCCCGAACACA 60.036 55.000 0.00 0.00 37.58 3.72
1633 1984 0.250513 AGCAGAGGATTCCCGAACAC 59.749 55.000 0.00 0.00 37.58 3.32
1634 1985 0.537188 GAGCAGAGGATTCCCGAACA 59.463 55.000 0.00 0.00 37.58 3.18
1635 1986 0.179070 GGAGCAGAGGATTCCCGAAC 60.179 60.000 0.00 0.00 37.58 3.95
1636 1987 0.325671 AGGAGCAGAGGATTCCCGAA 60.326 55.000 0.00 0.00 37.58 4.30
1637 1988 0.757188 GAGGAGCAGAGGATTCCCGA 60.757 60.000 0.00 0.00 37.58 5.14
1638 1989 1.745264 GAGGAGCAGAGGATTCCCG 59.255 63.158 0.00 0.00 37.58 5.14
1639 1990 1.753368 CGGAGGAGCAGAGGATTCCC 61.753 65.000 0.00 0.00 0.00 3.97
1640 1991 1.745264 CGGAGGAGCAGAGGATTCC 59.255 63.158 0.00 0.00 0.00 3.01
1641 1992 1.068921 GCGGAGGAGCAGAGGATTC 59.931 63.158 0.00 0.00 37.05 2.52
1642 1993 2.439104 GGCGGAGGAGCAGAGGATT 61.439 63.158 0.00 0.00 39.27 3.01
1643 1994 2.841988 GGCGGAGGAGCAGAGGAT 60.842 66.667 0.00 0.00 39.27 3.24
1644 1995 4.382541 TGGCGGAGGAGCAGAGGA 62.383 66.667 0.00 0.00 39.27 3.71
1645 1996 3.847602 CTGGCGGAGGAGCAGAGG 61.848 72.222 0.00 0.00 39.27 3.69
1646 1997 2.757508 TCTGGCGGAGGAGCAGAG 60.758 66.667 0.00 0.00 39.27 3.35
1647 1998 2.757508 CTCTGGCGGAGGAGCAGA 60.758 66.667 15.82 0.00 38.35 4.26
1648 1999 2.757508 TCTCTGGCGGAGGAGCAG 60.758 66.667 22.67 0.00 42.10 4.24
1649 2000 2.757508 CTCTCTGGCGGAGGAGCA 60.758 66.667 22.67 2.89 42.10 4.26
1650 2001 4.219999 GCTCTCTGGCGGAGGAGC 62.220 72.222 22.67 22.79 42.10 4.70
1659 2010 4.200283 GTCCGCTCCGCTCTCTGG 62.200 72.222 0.00 0.00 0.00 3.86
1660 2011 4.544689 CGTCCGCTCCGCTCTCTG 62.545 72.222 0.00 0.00 0.00 3.35
1672 2023 3.952628 GAAAGGGGTGCTCCGTCCG 62.953 68.421 0.00 0.00 36.01 4.79
1673 2024 2.046217 GAAAGGGGTGCTCCGTCC 60.046 66.667 0.00 0.00 36.01 4.79
1674 2025 2.434359 CGAAAGGGGTGCTCCGTC 60.434 66.667 0.00 0.00 36.01 4.79
1675 2026 4.699522 GCGAAAGGGGTGCTCCGT 62.700 66.667 0.00 0.00 36.01 4.69
1676 2027 4.394712 AGCGAAAGGGGTGCTCCG 62.395 66.667 0.00 0.00 32.44 4.63
1677 2028 2.747855 CAGCGAAAGGGGTGCTCC 60.748 66.667 0.00 0.00 36.69 4.70
1681 2032 3.121030 CGAGCAGCGAAAGGGGTG 61.121 66.667 0.00 0.00 44.57 4.61
1692 2043 3.166657 GCAGTTCAATTTTAGCGAGCAG 58.833 45.455 0.00 0.00 0.00 4.24
1693 2044 2.551887 TGCAGTTCAATTTTAGCGAGCA 59.448 40.909 0.00 0.00 0.00 4.26
1694 2045 3.201726 TGCAGTTCAATTTTAGCGAGC 57.798 42.857 0.00 0.00 0.00 5.03
1695 2046 3.545078 GCATGCAGTTCAATTTTAGCGAG 59.455 43.478 14.21 0.00 0.00 5.03
1696 2047 3.500982 GCATGCAGTTCAATTTTAGCGA 58.499 40.909 14.21 0.00 0.00 4.93
1697 2048 2.599973 GGCATGCAGTTCAATTTTAGCG 59.400 45.455 21.36 0.00 0.00 4.26
1698 2049 2.599973 CGGCATGCAGTTCAATTTTAGC 59.400 45.455 21.36 0.00 0.00 3.09
1699 2050 2.599973 GCGGCATGCAGTTCAATTTTAG 59.400 45.455 21.36 0.00 45.45 1.85
1700 2051 2.605030 GCGGCATGCAGTTCAATTTTA 58.395 42.857 21.36 0.00 45.45 1.52
1701 2052 1.431496 GCGGCATGCAGTTCAATTTT 58.569 45.000 21.36 0.00 45.45 1.82
1702 2053 3.126729 GCGGCATGCAGTTCAATTT 57.873 47.368 21.36 0.00 45.45 1.82
1703 2054 4.895854 GCGGCATGCAGTTCAATT 57.104 50.000 21.36 0.00 45.45 2.32
1728 2079 2.579787 CTCTGTAACTCCGCCGCG 60.580 66.667 5.59 5.59 0.00 6.46
1729 2080 2.886124 GCTCTGTAACTCCGCCGC 60.886 66.667 0.00 0.00 0.00 6.53
1730 2081 2.579787 CGCTCTGTAACTCCGCCG 60.580 66.667 0.00 0.00 0.00 6.46
1731 2082 2.202756 CCGCTCTGTAACTCCGCC 60.203 66.667 0.00 0.00 0.00 6.13
1732 2083 1.226717 CTCCGCTCTGTAACTCCGC 60.227 63.158 0.00 0.00 0.00 5.54
1733 2084 0.179161 CACTCCGCTCTGTAACTCCG 60.179 60.000 0.00 0.00 0.00 4.63
1734 2085 1.174783 TCACTCCGCTCTGTAACTCC 58.825 55.000 0.00 0.00 0.00 3.85
1735 2086 3.440228 GAATCACTCCGCTCTGTAACTC 58.560 50.000 0.00 0.00 0.00 3.01
1736 2087 2.166664 GGAATCACTCCGCTCTGTAACT 59.833 50.000 0.00 0.00 33.37 2.24
1737 2088 2.541556 GGAATCACTCCGCTCTGTAAC 58.458 52.381 0.00 0.00 33.37 2.50
1738 2089 2.961526 GGAATCACTCCGCTCTGTAA 57.038 50.000 0.00 0.00 33.37 2.41
1747 2098 1.814169 GGCCGTTCGGAATCACTCC 60.814 63.158 15.69 0.94 41.40 3.85
1748 2099 1.814169 GGGCCGTTCGGAATCACTC 60.814 63.158 15.69 0.00 0.00 3.51
1749 2100 2.267961 GGGCCGTTCGGAATCACT 59.732 61.111 15.69 0.00 0.00 3.41
1750 2101 1.963464 TAGGGGCCGTTCGGAATCAC 61.963 60.000 15.69 4.82 0.00 3.06
1751 2102 1.266160 TTAGGGGCCGTTCGGAATCA 61.266 55.000 15.69 0.00 0.00 2.57
1752 2103 0.107557 TTTAGGGGCCGTTCGGAATC 60.108 55.000 15.69 3.63 0.00 2.52
1753 2104 0.549469 ATTTAGGGGCCGTTCGGAAT 59.451 50.000 15.69 1.94 0.00 3.01
1754 2105 0.328926 AATTTAGGGGCCGTTCGGAA 59.671 50.000 15.69 0.00 0.00 4.30
1755 2106 0.107557 GAATTTAGGGGCCGTTCGGA 60.108 55.000 15.69 0.00 0.00 4.55
1756 2107 0.107361 AGAATTTAGGGGCCGTTCGG 60.107 55.000 3.09 6.90 0.00 4.30
1757 2108 1.296727 GAGAATTTAGGGGCCGTTCG 58.703 55.000 3.09 0.00 0.00 3.95
1758 2109 2.289565 CTGAGAATTTAGGGGCCGTTC 58.710 52.381 3.09 0.00 0.00 3.95
1759 2110 1.633945 ACTGAGAATTTAGGGGCCGTT 59.366 47.619 3.09 0.00 0.00 4.44
1760 2111 1.065418 CACTGAGAATTTAGGGGCCGT 60.065 52.381 3.37 3.37 0.00 5.68
1761 2112 1.668419 CACTGAGAATTTAGGGGCCG 58.332 55.000 0.00 0.00 0.00 6.13
1762 2113 1.064389 AGCACTGAGAATTTAGGGGCC 60.064 52.381 0.00 0.00 0.00 5.80
1763 2114 2.426842 AGCACTGAGAATTTAGGGGC 57.573 50.000 0.00 0.00 0.00 5.80
1764 2115 5.012893 AGAAAAGCACTGAGAATTTAGGGG 58.987 41.667 0.00 0.00 0.00 4.79
1765 2116 5.707298 TGAGAAAAGCACTGAGAATTTAGGG 59.293 40.000 0.00 0.00 0.00 3.53
1766 2117 6.808008 TGAGAAAAGCACTGAGAATTTAGG 57.192 37.500 0.00 0.00 0.00 2.69
1889 2241 5.920273 CACATTTAACAACTGGTTTGGCTAG 59.080 40.000 0.00 0.00 40.96 3.42
1924 2276 5.599999 TCTCTAGCCCTTAAGCTAAACAG 57.400 43.478 0.00 0.00 44.49 3.16
1934 2286 5.955959 TCATGTGTACTTTCTCTAGCCCTTA 59.044 40.000 0.00 0.00 0.00 2.69
1935 2287 4.777896 TCATGTGTACTTTCTCTAGCCCTT 59.222 41.667 0.00 0.00 0.00 3.95
1936 2288 4.353777 TCATGTGTACTTTCTCTAGCCCT 58.646 43.478 0.00 0.00 0.00 5.19
1937 2289 4.737855 TCATGTGTACTTTCTCTAGCCC 57.262 45.455 0.00 0.00 0.00 5.19
1938 2290 9.413048 GTTATATCATGTGTACTTTCTCTAGCC 57.587 37.037 0.00 0.00 0.00 3.93
1939 2291 9.967346 TGTTATATCATGTGTACTTTCTCTAGC 57.033 33.333 0.00 0.00 0.00 3.42
2000 2354 8.041323 TGGAGTACTATCTCAAGTTTGATTTCC 58.959 37.037 0.00 0.00 36.46 3.13
2024 2378 3.731652 TTGAGCAATTTGTGTCCTTGG 57.268 42.857 0.00 0.00 0.00 3.61
2071 2426 2.224018 ACGGCAGTGCACAAATGAAAAT 60.224 40.909 21.04 0.00 0.00 1.82
2108 2463 3.026694 TGCTGCTCTACAATAGCTCTCA 58.973 45.455 0.00 0.00 40.73 3.27
2116 2471 5.047164 CAGAGATAGGATGCTGCTCTACAAT 60.047 44.000 17.01 0.00 34.41 2.71
2393 2761 2.608623 TCTTGTGGTCTCATCTCACCA 58.391 47.619 0.00 0.00 40.56 4.17
2429 2830 6.440647 AGAATTAGTGGAGTGTCATGTAGGAA 59.559 38.462 0.00 0.00 0.00 3.36
2513 2914 6.035975 GCACCAAAACATTAGCAATACAATCC 59.964 38.462 0.00 0.00 0.00 3.01
2527 2928 4.603131 AGATCAGTATGGCACCAAAACAT 58.397 39.130 0.00 0.00 36.16 2.71
2532 2933 5.372343 ACATAAGATCAGTATGGCACCAA 57.628 39.130 16.51 0.00 36.16 3.67
2741 3384 3.973135 CGCTGATGAAAAAGCTATCATGC 59.027 43.478 12.70 10.22 36.45 4.06
2882 3525 8.751242 TCATTCAACCATATGATTTGACATGTT 58.249 29.630 15.49 1.99 0.00 2.71
2884 3527 9.027129 GTTCATTCAACCATATGATTTGACATG 57.973 33.333 15.49 18.05 31.34 3.21
2885 3528 8.751242 TGTTCATTCAACCATATGATTTGACAT 58.249 29.630 15.49 11.11 33.51 3.06
2886 3529 8.120140 TGTTCATTCAACCATATGATTTGACA 57.880 30.769 15.49 10.00 33.51 3.58
2887 3530 9.027129 CATGTTCATTCAACCATATGATTTGAC 57.973 33.333 15.49 8.21 33.51 3.18
2888 3531 8.751242 ACATGTTCATTCAACCATATGATTTGA 58.249 29.630 3.65 9.66 33.51 2.69
2889 3532 8.936070 ACATGTTCATTCAACCATATGATTTG 57.064 30.769 3.65 7.42 33.51 2.32
2975 3618 2.682856 CCATTGTGCGCTAACAACCTAT 59.317 45.455 14.68 0.00 42.56 2.57
2993 3636 5.271598 TGAACTATCCTTGAATTTGCCCAT 58.728 37.500 0.00 0.00 0.00 4.00
3008 3651 9.959749 CAGAGAAAACCTATAGTCTGAACTATC 57.040 37.037 9.20 0.00 43.79 2.08
3066 3709 2.032681 GCCTTGGCTATAGCGGGG 59.967 66.667 18.30 18.58 43.26 5.73
3145 3791 9.367160 TCACATATCCTACAGTGATGAAGATTA 57.633 33.333 0.00 0.00 36.20 1.75
3146 3792 8.147058 GTCACATATCCTACAGTGATGAAGATT 58.853 37.037 0.00 0.00 42.28 2.40
3182 3828 3.751175 CAGGTCGCTGAACCAGATTAAAA 59.249 43.478 0.00 0.00 42.12 1.52
3297 3943 3.818295 TGGTATTTGTTAACCTGGCCT 57.182 42.857 3.32 0.00 36.67 5.19
3324 3970 0.620556 TCTGGGCCCTAAGAGCAAAG 59.379 55.000 25.70 8.65 0.00 2.77
3497 4145 3.862877 TCAAGTCATATGGTCCATGGG 57.137 47.619 15.10 6.45 0.00 4.00
3552 4200 1.064952 ACCGCATTTTACGCATTAGGC 59.935 47.619 0.00 0.00 39.90 3.93
3771 4423 9.832445 AAGAGATTCAGACAAAGTAAACTACAA 57.168 29.630 0.00 0.00 0.00 2.41
4069 4727 5.351458 TCGTGTCCATGTTCTGATTCATAG 58.649 41.667 0.00 0.00 0.00 2.23
5126 6031 3.140325 TCCAAGACCATGTTCTTCACC 57.860 47.619 1.97 0.00 33.31 4.02
5405 6320 5.049954 GGTCTTTCACAAACGTGTTGCTATA 60.050 40.000 9.44 0.00 35.07 1.31
5406 6321 4.261031 GGTCTTTCACAAACGTGTTGCTAT 60.261 41.667 9.44 0.00 35.07 2.97
5522 6437 1.822990 AGGCTGCAACATCCAAATCAG 59.177 47.619 0.50 0.00 0.00 2.90
5644 6582 8.736244 ACAGTACAGAACACAAACAAAATTACT 58.264 29.630 0.00 0.00 0.00 2.24
5699 6641 7.609760 AGATACACAGAATTTTGCGTATTCA 57.390 32.000 10.09 0.00 35.04 2.57
5751 6697 6.500400 TCCGAATCTCCTATATCAATGGGAAA 59.500 38.462 0.00 0.00 41.78 3.13
5770 6721 3.408634 CCAAGTGTGTAAACCTCCGAAT 58.591 45.455 0.00 0.00 0.00 3.34
5801 6752 5.441500 TCCCAAGTGTGTATGTCTCAAAAA 58.558 37.500 0.00 0.00 0.00 1.94
5802 6753 5.042463 TCCCAAGTGTGTATGTCTCAAAA 57.958 39.130 0.00 0.00 0.00 2.44
5803 6754 4.698201 TCCCAAGTGTGTATGTCTCAAA 57.302 40.909 0.00 0.00 0.00 2.69
5804 6755 4.908601 ATCCCAAGTGTGTATGTCTCAA 57.091 40.909 0.00 0.00 0.00 3.02
5805 6756 4.142249 CGTATCCCAAGTGTGTATGTCTCA 60.142 45.833 0.00 0.00 0.00 3.27
5806 6757 4.142227 ACGTATCCCAAGTGTGTATGTCTC 60.142 45.833 0.00 0.00 0.00 3.36
5807 6758 3.767673 ACGTATCCCAAGTGTGTATGTCT 59.232 43.478 0.00 0.00 0.00 3.41
5808 6759 4.119442 ACGTATCCCAAGTGTGTATGTC 57.881 45.455 0.00 0.00 0.00 3.06
5809 6760 4.463539 TGTACGTATCCCAAGTGTGTATGT 59.536 41.667 0.00 0.00 0.00 2.29
5810 6761 4.802039 GTGTACGTATCCCAAGTGTGTATG 59.198 45.833 0.00 0.00 0.00 2.39
5811 6762 4.439153 CGTGTACGTATCCCAAGTGTGTAT 60.439 45.833 0.00 0.00 34.11 2.29
5812 6763 3.119884 CGTGTACGTATCCCAAGTGTGTA 60.120 47.826 0.00 0.00 34.11 2.90
5813 6764 2.352030 CGTGTACGTATCCCAAGTGTGT 60.352 50.000 0.00 0.00 34.11 3.72
5814 6765 2.256174 CGTGTACGTATCCCAAGTGTG 58.744 52.381 0.00 0.00 34.11 3.82
5815 6766 2.642139 CGTGTACGTATCCCAAGTGT 57.358 50.000 0.00 0.00 34.11 3.55
5828 6779 7.355332 ACAGTTATTCCATTTGTACGTGTAC 57.645 36.000 0.00 3.21 36.63 2.90
5833 6784 7.067532 TGCTTACAGTTATTCCATTTGTACG 57.932 36.000 0.00 0.00 0.00 3.67
5834 6785 8.673711 TGATGCTTACAGTTATTCCATTTGTAC 58.326 33.333 0.00 0.00 0.00 2.90
5852 6803 0.245266 TCGCTGGACGTTGATGCTTA 59.755 50.000 0.00 0.00 44.19 3.09
5867 6858 3.138283 TCCTGAAATAAATCCCCATCGCT 59.862 43.478 0.00 0.00 0.00 4.93
5868 6859 3.486383 TCCTGAAATAAATCCCCATCGC 58.514 45.455 0.00 0.00 0.00 4.58
5869 6860 6.294731 GGAAATCCTGAAATAAATCCCCATCG 60.295 42.308 0.00 0.00 0.00 3.84
5870 6861 6.784473 AGGAAATCCTGAAATAAATCCCCATC 59.216 38.462 0.00 0.00 46.55 3.51
5871 6862 6.696638 AGGAAATCCTGAAATAAATCCCCAT 58.303 36.000 0.00 0.00 46.55 4.00
5872 6863 6.103838 AGGAAATCCTGAAATAAATCCCCA 57.896 37.500 0.00 0.00 46.55 4.96
5896 6887 0.234106 CCTCATCGAATGCACATCGC 59.766 55.000 16.61 0.00 40.04 4.58
5897 6888 1.791204 CTCCTCATCGAATGCACATCG 59.209 52.381 15.57 15.57 41.53 3.84
5898 6889 2.799412 GTCTCCTCATCGAATGCACATC 59.201 50.000 0.00 0.00 0.00 3.06
5899 6890 2.800985 CGTCTCCTCATCGAATGCACAT 60.801 50.000 0.00 0.00 0.00 3.21
5900 6891 1.469767 CGTCTCCTCATCGAATGCACA 60.470 52.381 0.00 0.00 0.00 4.57
5901 6892 1.203928 CGTCTCCTCATCGAATGCAC 58.796 55.000 0.00 0.00 0.00 4.57
5902 6893 0.817654 ACGTCTCCTCATCGAATGCA 59.182 50.000 0.00 0.00 0.00 3.96
5903 6894 1.927895 AACGTCTCCTCATCGAATGC 58.072 50.000 0.00 0.00 0.00 3.56
5904 6895 3.549471 CAGAAACGTCTCCTCATCGAATG 59.451 47.826 0.00 0.00 28.78 2.67
5905 6896 3.193691 ACAGAAACGTCTCCTCATCGAAT 59.806 43.478 0.00 0.00 28.78 3.34
5906 6897 2.557056 ACAGAAACGTCTCCTCATCGAA 59.443 45.455 0.00 0.00 28.78 3.71
5907 6898 2.160205 ACAGAAACGTCTCCTCATCGA 58.840 47.619 0.00 0.00 28.78 3.59
5908 6899 2.520979 GACAGAAACGTCTCCTCATCG 58.479 52.381 0.00 0.00 32.92 3.84
5909 6900 2.161808 TCGACAGAAACGTCTCCTCATC 59.838 50.000 0.00 0.00 33.54 2.92
5910 6901 2.095161 GTCGACAGAAACGTCTCCTCAT 60.095 50.000 11.55 0.00 33.54 2.90
5911 6902 1.266175 GTCGACAGAAACGTCTCCTCA 59.734 52.381 11.55 0.00 33.54 3.86
5912 6903 1.725292 CGTCGACAGAAACGTCTCCTC 60.725 57.143 17.16 0.00 34.30 3.71
5913 6904 0.237761 CGTCGACAGAAACGTCTCCT 59.762 55.000 17.16 0.00 34.30 3.69
5914 6905 0.236711 TCGTCGACAGAAACGTCTCC 59.763 55.000 17.16 0.00 39.78 3.71
5915 6906 1.316414 GTCGTCGACAGAAACGTCTC 58.684 55.000 20.28 0.00 39.78 3.36
5916 6907 0.383983 CGTCGTCGACAGAAACGTCT 60.384 55.000 24.13 0.00 39.78 4.18
5917 6908 0.383491 TCGTCGTCGACAGAAACGTC 60.383 55.000 24.13 0.00 41.35 4.34
5918 6909 0.383983 CTCGTCGTCGACAGAAACGT 60.384 55.000 24.13 0.00 41.35 3.99
5919 6910 0.110956 TCTCGTCGTCGACAGAAACG 60.111 55.000 24.13 17.77 41.35 3.60
5920 6911 1.316414 GTCTCGTCGTCGACAGAAAC 58.684 55.000 24.13 14.89 41.35 2.78
5921 6912 0.110956 CGTCTCGTCGTCGACAGAAA 60.111 55.000 24.13 7.54 41.35 2.52
5922 6913 1.490258 CGTCTCGTCGTCGACAGAA 59.510 57.895 24.13 8.76 41.35 3.02
5923 6914 3.008240 GCGTCTCGTCGTCGACAGA 62.008 63.158 24.13 20.50 41.35 3.41
5924 6915 2.571096 GCGTCTCGTCGTCGACAG 60.571 66.667 24.13 18.82 41.35 3.51
5925 6916 4.081030 GGCGTCTCGTCGTCGACA 62.081 66.667 24.13 10.99 41.35 4.35
5926 6917 2.447887 TAGGCGTCTCGTCGTCGAC 61.448 63.158 15.51 15.51 41.35 4.20
5927 6918 2.125952 TAGGCGTCTCGTCGTCGA 60.126 61.111 4.42 4.42 44.12 4.20
5928 6919 2.021106 GTAGGCGTCTCGTCGTCG 59.979 66.667 0.00 0.00 40.52 5.12
5929 6920 1.060622 CTGTAGGCGTCTCGTCGTC 59.939 63.158 0.00 0.00 36.23 4.20
5930 6921 1.670406 ACTGTAGGCGTCTCGTCGT 60.670 57.895 0.00 0.00 36.23 4.34
5931 6922 1.226046 CACTGTAGGCGTCTCGTCG 60.226 63.158 0.00 0.00 36.23 5.12
5932 6923 0.179194 GTCACTGTAGGCGTCTCGTC 60.179 60.000 0.00 0.00 0.00 4.20
5933 6924 0.605860 AGTCACTGTAGGCGTCTCGT 60.606 55.000 0.00 0.00 0.00 4.18
5934 6925 0.522180 AAGTCACTGTAGGCGTCTCG 59.478 55.000 0.00 0.00 0.00 4.04
5935 6926 1.466024 CGAAGTCACTGTAGGCGTCTC 60.466 57.143 0.00 0.00 0.00 3.36
5936 6927 0.522180 CGAAGTCACTGTAGGCGTCT 59.478 55.000 0.00 0.00 0.00 4.18
5937 6928 0.240411 ACGAAGTCACTGTAGGCGTC 59.760 55.000 0.00 0.00 29.74 5.19
5938 6929 0.039437 CACGAAGTCACTGTAGGCGT 60.039 55.000 0.00 0.00 41.61 5.68
5939 6930 0.240145 TCACGAAGTCACTGTAGGCG 59.760 55.000 0.00 0.00 41.61 5.52
5940 6931 2.433868 TTCACGAAGTCACTGTAGGC 57.566 50.000 0.00 0.00 41.61 3.93
5941 6932 4.082733 TGAGATTCACGAAGTCACTGTAGG 60.083 45.833 0.00 0.00 41.61 3.18
5942 6933 5.048153 TGAGATTCACGAAGTCACTGTAG 57.952 43.478 0.00 0.00 41.61 2.74
5943 6934 5.240844 TCTTGAGATTCACGAAGTCACTGTA 59.759 40.000 0.00 0.00 41.61 2.74
5944 6935 4.038042 TCTTGAGATTCACGAAGTCACTGT 59.962 41.667 0.00 0.00 41.61 3.55
5945 6936 4.550422 TCTTGAGATTCACGAAGTCACTG 58.450 43.478 0.00 0.00 41.61 3.66
5946 6937 4.855715 TCTTGAGATTCACGAAGTCACT 57.144 40.909 0.00 0.00 41.61 3.41
5947 6938 5.164233 TCATCTTGAGATTCACGAAGTCAC 58.836 41.667 0.00 0.00 31.78 3.67
5948 6939 5.391312 TCATCTTGAGATTCACGAAGTCA 57.609 39.130 0.00 0.00 31.78 3.41
5949 6940 7.359097 GCATATCATCTTGAGATTCACGAAGTC 60.359 40.741 0.00 0.00 31.78 3.01
5950 6941 6.423302 GCATATCATCTTGAGATTCACGAAGT 59.577 38.462 0.00 0.00 34.16 3.01
5951 6942 6.128607 GGCATATCATCTTGAGATTCACGAAG 60.129 42.308 0.00 0.00 28.30 3.79
5952 6943 5.698089 GGCATATCATCTTGAGATTCACGAA 59.302 40.000 0.00 0.00 28.30 3.85
5953 6944 5.233225 GGCATATCATCTTGAGATTCACGA 58.767 41.667 0.00 0.00 31.21 4.35
5954 6945 4.091075 CGGCATATCATCTTGAGATTCACG 59.909 45.833 0.00 0.00 31.21 4.35
5955 6946 4.391216 CCGGCATATCATCTTGAGATTCAC 59.609 45.833 0.00 0.00 31.21 3.18
5956 6947 4.040829 ACCGGCATATCATCTTGAGATTCA 59.959 41.667 0.00 0.00 31.21 2.57
5957 6948 4.573900 ACCGGCATATCATCTTGAGATTC 58.426 43.478 0.00 0.00 31.21 2.52
5958 6949 4.630644 ACCGGCATATCATCTTGAGATT 57.369 40.909 0.00 0.00 31.21 2.40
5959 6950 4.040829 TGAACCGGCATATCATCTTGAGAT 59.959 41.667 0.00 0.00 34.56 2.75
5960 6951 3.387699 TGAACCGGCATATCATCTTGAGA 59.612 43.478 0.00 0.00 0.00 3.27
5961 6952 3.732212 TGAACCGGCATATCATCTTGAG 58.268 45.455 0.00 0.00 0.00 3.02
5962 6953 3.134623 ACTGAACCGGCATATCATCTTGA 59.865 43.478 0.00 0.00 0.00 3.02
5963 6954 3.470709 ACTGAACCGGCATATCATCTTG 58.529 45.455 0.00 0.00 0.00 3.02
5964 6955 3.389329 AGACTGAACCGGCATATCATCTT 59.611 43.478 0.00 0.00 0.00 2.40
5965 6956 2.968574 AGACTGAACCGGCATATCATCT 59.031 45.455 0.00 4.23 0.00 2.90
5966 6957 3.006323 AGAGACTGAACCGGCATATCATC 59.994 47.826 0.00 2.11 0.00 2.92
5967 6958 2.968574 AGAGACTGAACCGGCATATCAT 59.031 45.455 0.00 0.00 0.00 2.45
5968 6959 2.362397 GAGAGACTGAACCGGCATATCA 59.638 50.000 0.00 0.00 0.00 2.15
5969 6960 2.605823 CGAGAGACTGAACCGGCATATC 60.606 54.545 0.00 0.00 0.00 1.63
5970 6961 1.338337 CGAGAGACTGAACCGGCATAT 59.662 52.381 0.00 0.00 0.00 1.78
5971 6962 0.738975 CGAGAGACTGAACCGGCATA 59.261 55.000 0.00 0.00 0.00 3.14
5972 6963 1.513158 CGAGAGACTGAACCGGCAT 59.487 57.895 0.00 0.00 0.00 4.40
5973 6964 2.636412 CCGAGAGACTGAACCGGCA 61.636 63.158 0.00 0.00 33.47 5.69
5974 6965 2.182030 CCGAGAGACTGAACCGGC 59.818 66.667 0.00 0.00 33.47 6.13
5975 6966 1.658686 CCTCCGAGAGACTGAACCGG 61.659 65.000 0.00 0.00 41.36 5.28
5976 6967 0.961358 ACCTCCGAGAGACTGAACCG 60.961 60.000 0.00 0.00 0.00 4.44
5977 6968 0.528470 CACCTCCGAGAGACTGAACC 59.472 60.000 0.00 0.00 0.00 3.62
5978 6969 1.249407 ACACCTCCGAGAGACTGAAC 58.751 55.000 0.00 0.00 0.00 3.18
5979 6970 1.996798 AACACCTCCGAGAGACTGAA 58.003 50.000 0.00 0.00 0.00 3.02
5980 6971 1.996798 AAACACCTCCGAGAGACTGA 58.003 50.000 0.00 0.00 0.00 3.41
5981 6972 4.036971 CCTATAAACACCTCCGAGAGACTG 59.963 50.000 0.00 1.36 0.00 3.51
5982 6973 4.208746 CCTATAAACACCTCCGAGAGACT 58.791 47.826 0.00 0.00 0.00 3.24
5983 6974 3.318557 CCCTATAAACACCTCCGAGAGAC 59.681 52.174 0.00 0.00 0.00 3.36
5984 6975 3.563223 CCCTATAAACACCTCCGAGAGA 58.437 50.000 0.00 0.00 0.00 3.10
5985 6976 2.628657 CCCCTATAAACACCTCCGAGAG 59.371 54.545 0.00 0.00 0.00 3.20
5986 6977 2.023695 ACCCCTATAAACACCTCCGAGA 60.024 50.000 0.00 0.00 0.00 4.04
5987 6978 2.395619 ACCCCTATAAACACCTCCGAG 58.604 52.381 0.00 0.00 0.00 4.63
5988 6979 2.555732 ACCCCTATAAACACCTCCGA 57.444 50.000 0.00 0.00 0.00 4.55
5989 6980 3.069158 CACTACCCCTATAAACACCTCCG 59.931 52.174 0.00 0.00 0.00 4.63
5990 6981 4.035814 ACACTACCCCTATAAACACCTCC 58.964 47.826 0.00 0.00 0.00 4.30
5991 6982 4.468868 ACACACTACCCCTATAAACACCTC 59.531 45.833 0.00 0.00 0.00 3.85
5992 6983 4.224370 CACACACTACCCCTATAAACACCT 59.776 45.833 0.00 0.00 0.00 4.00
5993 6984 4.019950 ACACACACTACCCCTATAAACACC 60.020 45.833 0.00 0.00 0.00 4.16
5994 6985 4.933400 CACACACACTACCCCTATAAACAC 59.067 45.833 0.00 0.00 0.00 3.32
5995 6986 4.563993 GCACACACACTACCCCTATAAACA 60.564 45.833 0.00 0.00 0.00 2.83
5996 6987 3.937079 GCACACACACTACCCCTATAAAC 59.063 47.826 0.00 0.00 0.00 2.01
5997 6988 3.368635 CGCACACACACTACCCCTATAAA 60.369 47.826 0.00 0.00 0.00 1.40
5998 6989 2.166870 CGCACACACACTACCCCTATAA 59.833 50.000 0.00 0.00 0.00 0.98
5999 6990 1.752498 CGCACACACACTACCCCTATA 59.248 52.381 0.00 0.00 0.00 1.31
6000 6991 0.535335 CGCACACACACTACCCCTAT 59.465 55.000 0.00 0.00 0.00 2.57
6001 6992 1.969085 CGCACACACACTACCCCTA 59.031 57.895 0.00 0.00 0.00 3.53
6002 6993 2.741092 CGCACACACACTACCCCT 59.259 61.111 0.00 0.00 0.00 4.79
6003 6994 3.047877 GCGCACACACACTACCCC 61.048 66.667 0.30 0.00 0.00 4.95
6004 6995 3.411351 CGCGCACACACACTACCC 61.411 66.667 8.75 0.00 0.00 3.69
6005 6996 4.072088 GCGCGCACACACACTACC 62.072 66.667 29.10 0.00 0.00 3.18
6006 6997 4.409588 CGCGCGCACACACACTAC 62.410 66.667 32.61 0.00 0.00 2.73
6007 6998 4.934942 ACGCGCGCACACACACTA 62.935 61.111 32.58 0.00 0.00 2.74
6009 7000 2.757946 ATAAACGCGCGCACACACAC 62.758 55.000 32.58 0.00 0.00 3.82
6010 7001 1.282930 TATAAACGCGCGCACACACA 61.283 50.000 32.58 10.80 0.00 3.72
6011 7002 0.179245 TTATAAACGCGCGCACACAC 60.179 50.000 32.58 0.00 0.00 3.82
6012 7003 0.093875 CTTATAAACGCGCGCACACA 59.906 50.000 32.58 13.59 0.00 3.72
6013 7004 0.585519 CCTTATAAACGCGCGCACAC 60.586 55.000 32.58 0.72 0.00 3.82
6014 7005 1.697772 CCCTTATAAACGCGCGCACA 61.698 55.000 32.58 15.55 0.00 4.57
6015 7006 1.011574 CCCTTATAAACGCGCGCAC 60.012 57.895 32.58 2.05 0.00 5.34
6016 7007 0.179116 TACCCTTATAAACGCGCGCA 60.179 50.000 32.58 16.40 0.00 6.09
6017 7008 0.929615 TTACCCTTATAAACGCGCGC 59.070 50.000 32.58 23.91 0.00 6.86
6018 7009 1.071041 GCTTACCCTTATAAACGCGCG 60.071 52.381 30.96 30.96 0.00 6.86
6019 7010 1.071041 CGCTTACCCTTATAAACGCGC 60.071 52.381 5.73 0.00 32.83 6.86
6020 7011 2.195922 ACGCTTACCCTTATAAACGCG 58.804 47.619 3.53 3.53 44.26 6.01
6021 7012 4.376717 GCATACGCTTACCCTTATAAACGC 60.377 45.833 0.00 0.00 34.30 4.84
6022 7013 4.143473 CGCATACGCTTACCCTTATAAACG 60.143 45.833 0.00 0.00 35.30 3.60
6023 7014 5.260027 CGCATACGCTTACCCTTATAAAC 57.740 43.478 0.00 0.00 35.30 2.01
6038 7029 2.222202 CGGTCATATAAACGCGCATACG 60.222 50.000 5.73 0.00 44.07 3.06
6039 7030 2.471749 GCGGTCATATAAACGCGCATAC 60.472 50.000 5.73 0.00 42.66 2.39
6040 7031 1.722464 GCGGTCATATAAACGCGCATA 59.278 47.619 5.73 1.53 42.66 3.14
6041 7032 0.511221 GCGGTCATATAAACGCGCAT 59.489 50.000 5.73 0.00 42.66 4.73
6042 7033 1.928653 GCGGTCATATAAACGCGCA 59.071 52.632 5.73 0.00 42.66 6.09
6043 7034 4.792125 GCGGTCATATAAACGCGC 57.208 55.556 5.73 0.00 42.66 6.86
6046 7037 3.494626 AGATGCAAGCGGTCATATAAACG 59.505 43.478 0.00 0.00 0.00 3.60
6047 7038 4.273480 ACAGATGCAAGCGGTCATATAAAC 59.727 41.667 0.00 0.00 0.00 2.01
6048 7039 4.450976 ACAGATGCAAGCGGTCATATAAA 58.549 39.130 0.00 0.00 0.00 1.40
6049 7040 4.071961 ACAGATGCAAGCGGTCATATAA 57.928 40.909 0.00 0.00 0.00 0.98
6050 7041 3.751479 ACAGATGCAAGCGGTCATATA 57.249 42.857 0.00 0.00 0.00 0.86
6051 7042 2.627515 ACAGATGCAAGCGGTCATAT 57.372 45.000 0.00 0.00 0.00 1.78
6052 7043 2.798145 CGTACAGATGCAAGCGGTCATA 60.798 50.000 0.00 0.00 30.10 2.15
6053 7044 1.656652 GTACAGATGCAAGCGGTCAT 58.343 50.000 0.00 0.00 30.10 3.06
6054 7045 0.735978 CGTACAGATGCAAGCGGTCA 60.736 55.000 0.00 0.00 30.10 4.02
6055 7046 1.421410 CCGTACAGATGCAAGCGGTC 61.421 60.000 0.00 0.00 30.10 4.79
6056 7047 1.447838 CCGTACAGATGCAAGCGGT 60.448 57.895 0.00 0.00 33.46 5.68
6057 7048 1.447838 ACCGTACAGATGCAAGCGG 60.448 57.895 0.00 1.20 44.10 5.52
6058 7049 1.014044 ACACCGTACAGATGCAAGCG 61.014 55.000 0.00 0.00 0.00 4.68
6059 7050 1.156736 AACACCGTACAGATGCAAGC 58.843 50.000 0.00 0.00 0.00 4.01
6060 7051 5.351233 TTTTAACACCGTACAGATGCAAG 57.649 39.130 0.00 0.00 0.00 4.01
6061 7052 5.752892 TTTTTAACACCGTACAGATGCAA 57.247 34.783 0.00 0.00 0.00 4.08
6082 7073 1.901833 GGGCATCACTGGGACATTTTT 59.098 47.619 0.00 0.00 38.20 1.94
6083 7074 1.560505 GGGCATCACTGGGACATTTT 58.439 50.000 0.00 0.00 38.20 1.82
6084 7075 0.680921 CGGGCATCACTGGGACATTT 60.681 55.000 0.00 0.00 38.20 2.32
6085 7076 1.077501 CGGGCATCACTGGGACATT 60.078 57.895 0.00 0.00 38.20 2.71
6086 7077 2.591753 CGGGCATCACTGGGACAT 59.408 61.111 0.00 0.00 38.20 3.06
6087 7078 3.716195 CCGGGCATCACTGGGACA 61.716 66.667 0.00 0.00 33.05 4.02
6103 7094 1.312815 AATGCTAGAAATCGGCAGCC 58.687 50.000 0.00 0.00 39.38 4.85
6104 7095 3.604772 CGTAAATGCTAGAAATCGGCAGC 60.605 47.826 0.00 4.69 39.38 5.25
6105 7096 3.604772 GCGTAAATGCTAGAAATCGGCAG 60.605 47.826 0.00 0.00 39.38 4.85
6106 7097 2.286833 GCGTAAATGCTAGAAATCGGCA 59.713 45.455 0.00 6.58 40.32 5.69
6107 7098 2.349532 GGCGTAAATGCTAGAAATCGGC 60.350 50.000 0.00 0.00 35.79 5.54
6108 7099 2.223377 GGGCGTAAATGCTAGAAATCGG 59.777 50.000 0.00 0.00 34.52 4.18
6109 7100 3.059597 CAGGGCGTAAATGCTAGAAATCG 60.060 47.826 0.00 0.00 34.52 3.34
6110 7101 3.251004 CCAGGGCGTAAATGCTAGAAATC 59.749 47.826 0.00 0.00 34.52 2.17
6111 7102 3.214328 CCAGGGCGTAAATGCTAGAAAT 58.786 45.455 0.00 0.00 34.52 2.17
6112 7103 2.639065 CCAGGGCGTAAATGCTAGAAA 58.361 47.619 0.00 0.00 34.52 2.52
6113 7104 1.745827 GCCAGGGCGTAAATGCTAGAA 60.746 52.381 0.00 0.00 34.52 2.10
6114 7105 0.179056 GCCAGGGCGTAAATGCTAGA 60.179 55.000 0.00 0.00 34.52 2.43
6115 7106 2.321213 GCCAGGGCGTAAATGCTAG 58.679 57.895 0.00 0.00 34.52 3.42
6116 7107 4.551729 GCCAGGGCGTAAATGCTA 57.448 55.556 0.00 0.00 34.52 3.49
6127 7118 3.391665 CTAGCCCAACGAGCCAGGG 62.392 68.421 0.00 0.00 45.68 4.45
6174 7165 2.274645 CCGTGCAGCCCATTTTGGA 61.275 57.895 0.00 0.00 40.96 3.53
6230 7221 4.506255 GGCCAGAACGGATGGGGG 62.506 72.222 0.00 0.00 38.33 5.40
6294 7297 4.156190 GCTCTAAAACCTAGCAAAGAACCC 59.844 45.833 0.00 0.00 36.26 4.11
6606 7609 1.227031 GTGGTCGTCGTTGGTGTCA 60.227 57.895 0.00 0.00 0.00 3.58
6627 7630 2.276732 TGGAACCCTTGCTCTTCTTG 57.723 50.000 0.00 0.00 0.00 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.