Multiple sequence alignment - TraesCS4A01G183600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G183600 chr4A 100.000 3530 0 0 1 3530 461352961 461356490 0.000000e+00 6519
1 TraesCS4A01G183600 chr4A 89.747 751 63 12 2786 3528 124370801 124370057 0.000000e+00 948
2 TraesCS4A01G183600 chr4A 91.971 411 32 1 1 411 442247165 442246756 3.060000e-160 575
3 TraesCS4A01G183600 chr4A 91.727 411 33 1 1 411 273350816 273351225 1.420000e-158 569
4 TraesCS4A01G183600 chr4A 91.525 413 32 3 1 412 442041532 442041122 1.840000e-157 566
5 TraesCS4A01G183600 chr4A 91.484 411 33 2 1 411 231495188 231495596 6.620000e-157 564
6 TraesCS4A01G183600 chr4A 86.538 156 21 0 429 584 37028627 37028782 4.680000e-39 172
7 TraesCS4A01G183600 chr4D 96.435 2188 54 10 618 2789 115544251 115542072 0.000000e+00 3587
8 TraesCS4A01G183600 chr4D 89.153 756 61 18 2788 3528 308810033 308810782 0.000000e+00 922
9 TraesCS4A01G183600 chr4D 89.595 740 55 18 2788 3514 77311794 77312524 0.000000e+00 920
10 TraesCS4A01G183600 chr4B 96.919 2077 61 3 618 2694 176838264 176840337 0.000000e+00 3478
11 TraesCS4A01G183600 chr5B 82.614 1507 231 16 1030 2525 233922294 233923780 0.000000e+00 1303
12 TraesCS4A01G183600 chr5B 86.364 154 21 0 434 587 519010135 519009982 6.060000e-38 169
13 TraesCS4A01G183600 chr5D 82.548 1507 232 17 1030 2525 217755046 217756532 0.000000e+00 1297
14 TraesCS4A01G183600 chr5D 88.048 753 74 12 2786 3528 458758739 458757993 0.000000e+00 878
15 TraesCS4A01G183600 chr5D 83.784 333 46 5 2197 2521 484260469 484260137 3.420000e-80 309
16 TraesCS4A01G183600 chr5A 82.493 1508 231 18 1030 2525 290548009 290549495 0.000000e+00 1291
17 TraesCS4A01G183600 chr2D 81.993 1505 229 17 1030 2519 618532322 618530845 0.000000e+00 1240
18 TraesCS4A01G183600 chr2D 82.945 1331 187 19 1206 2525 618645451 618646752 0.000000e+00 1164
19 TraesCS4A01G183600 chr2D 88.313 753 69 15 2788 3528 590803883 590804628 0.000000e+00 885
20 TraesCS4A01G183600 chr2B 81.939 1506 228 20 1030 2519 755038348 755036871 0.000000e+00 1234
21 TraesCS4A01G183600 chr2B 83.333 936 141 5 1030 1959 755054596 755055522 0.000000e+00 850
22 TraesCS4A01G183600 chr2B 81.953 471 76 5 2058 2519 755056078 755056548 1.190000e-104 390
23 TraesCS4A01G183600 chr2B 83.333 174 24 4 412 583 215330423 215330593 4.720000e-34 156
24 TraesCS4A01G183600 chr2A 81.951 1507 226 21 1030 2519 749448062 749446585 0.000000e+00 1234
25 TraesCS4A01G183600 chr2A 81.770 1514 228 23 1030 2525 749523752 749525235 0.000000e+00 1223
26 TraesCS4A01G183600 chr2A 92.701 411 28 2 1 411 155901313 155901721 3.030000e-165 592
27 TraesCS4A01G183600 chr2A 91.546 414 31 2 1 411 155938882 155939294 5.110000e-158 568
28 TraesCS4A01G183600 chr2A 84.571 175 26 1 411 584 670453492 670453666 4.680000e-39 172
29 TraesCS4A01G183600 chr1D 89.007 755 64 16 2786 3528 450510622 450511369 0.000000e+00 917
30 TraesCS4A01G183600 chr1D 74.255 1309 249 64 1160 2418 373116258 373117528 1.480000e-128 470
31 TraesCS4A01G183600 chr3A 88.919 749 61 13 2786 3528 486003374 486002642 0.000000e+00 904
32 TraesCS4A01G183600 chr3A 91.990 412 31 2 1 411 337029879 337029469 8.500000e-161 577
33 TraesCS4A01G183600 chr3A 91.484 411 34 1 1 411 407042300 407041891 6.620000e-157 564
34 TraesCS4A01G183600 chr3A 86.792 159 21 0 429 587 746390697 746390539 1.010000e-40 178
35 TraesCS4A01G183600 chr3A 84.848 165 24 1 424 587 684658673 684658509 7.840000e-37 165
36 TraesCS4A01G183600 chr7D 88.579 753 66 13 2785 3526 576659245 576659988 0.000000e+00 896
37 TraesCS4A01G183600 chr7D 88.228 756 69 17 2786 3528 194790317 194789569 0.000000e+00 885
38 TraesCS4A01G183600 chr7A 91.484 411 32 3 1 411 116414516 116414923 2.380000e-156 562
39 TraesCS4A01G183600 chr7A 86.164 159 22 0 429 587 681490106 681489948 4.680000e-39 172
40 TraesCS4A01G183600 chr1A 74.406 1305 258 55 1158 2418 472550550 472551822 1.140000e-134 490
41 TraesCS4A01G183600 chr3D 73.596 1015 224 27 1516 2517 478061608 478060625 2.020000e-92 350
42 TraesCS4A01G183600 chr3B 84.472 161 25 0 424 584 715680209 715680369 3.650000e-35 159
43 TraesCS4A01G183600 chr1B 82.955 176 28 2 411 584 176783517 176783692 1.310000e-34 158


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G183600 chr4A 461352961 461356490 3529 False 6519 6519 100.000 1 3530 1 chr4A.!!$F4 3529
1 TraesCS4A01G183600 chr4A 124370057 124370801 744 True 948 948 89.747 2786 3528 1 chr4A.!!$R1 742
2 TraesCS4A01G183600 chr4D 115542072 115544251 2179 True 3587 3587 96.435 618 2789 1 chr4D.!!$R1 2171
3 TraesCS4A01G183600 chr4D 308810033 308810782 749 False 922 922 89.153 2788 3528 1 chr4D.!!$F2 740
4 TraesCS4A01G183600 chr4D 77311794 77312524 730 False 920 920 89.595 2788 3514 1 chr4D.!!$F1 726
5 TraesCS4A01G183600 chr4B 176838264 176840337 2073 False 3478 3478 96.919 618 2694 1 chr4B.!!$F1 2076
6 TraesCS4A01G183600 chr5B 233922294 233923780 1486 False 1303 1303 82.614 1030 2525 1 chr5B.!!$F1 1495
7 TraesCS4A01G183600 chr5D 217755046 217756532 1486 False 1297 1297 82.548 1030 2525 1 chr5D.!!$F1 1495
8 TraesCS4A01G183600 chr5D 458757993 458758739 746 True 878 878 88.048 2786 3528 1 chr5D.!!$R1 742
9 TraesCS4A01G183600 chr5A 290548009 290549495 1486 False 1291 1291 82.493 1030 2525 1 chr5A.!!$F1 1495
10 TraesCS4A01G183600 chr2D 618530845 618532322 1477 True 1240 1240 81.993 1030 2519 1 chr2D.!!$R1 1489
11 TraesCS4A01G183600 chr2D 618645451 618646752 1301 False 1164 1164 82.945 1206 2525 1 chr2D.!!$F2 1319
12 TraesCS4A01G183600 chr2D 590803883 590804628 745 False 885 885 88.313 2788 3528 1 chr2D.!!$F1 740
13 TraesCS4A01G183600 chr2B 755036871 755038348 1477 True 1234 1234 81.939 1030 2519 1 chr2B.!!$R1 1489
14 TraesCS4A01G183600 chr2B 755054596 755056548 1952 False 620 850 82.643 1030 2519 2 chr2B.!!$F2 1489
15 TraesCS4A01G183600 chr2A 749446585 749448062 1477 True 1234 1234 81.951 1030 2519 1 chr2A.!!$R1 1489
16 TraesCS4A01G183600 chr2A 749523752 749525235 1483 False 1223 1223 81.770 1030 2525 1 chr2A.!!$F4 1495
17 TraesCS4A01G183600 chr1D 450510622 450511369 747 False 917 917 89.007 2786 3528 1 chr1D.!!$F2 742
18 TraesCS4A01G183600 chr1D 373116258 373117528 1270 False 470 470 74.255 1160 2418 1 chr1D.!!$F1 1258
19 TraesCS4A01G183600 chr3A 486002642 486003374 732 True 904 904 88.919 2786 3528 1 chr3A.!!$R3 742
20 TraesCS4A01G183600 chr7D 576659245 576659988 743 False 896 896 88.579 2785 3526 1 chr7D.!!$F1 741
21 TraesCS4A01G183600 chr7D 194789569 194790317 748 True 885 885 88.228 2786 3528 1 chr7D.!!$R1 742
22 TraesCS4A01G183600 chr1A 472550550 472551822 1272 False 490 490 74.406 1158 2418 1 chr1A.!!$F1 1260
23 TraesCS4A01G183600 chr3D 478060625 478061608 983 True 350 350 73.596 1516 2517 1 chr3D.!!$R1 1001

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
97 98 0.033109 CCCACCCCCTTCATTTCCTC 60.033 60.0 0.00 0.00 0.0 3.71 F
321 322 0.093705 CGCTGCAAGTAGTTCTTCGC 59.906 55.0 0.00 0.00 35.3 4.70 F
489 490 0.166597 TGCTTGCTCGCGAAAAGATG 59.833 50.0 26.79 10.34 0.0 2.90 F
490 491 0.166814 GCTTGCTCGCGAAAAGATGT 59.833 50.0 26.79 0.00 0.0 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1056 1064 0.188342 AGAAAAGGAAAGCCAGGCCA 59.812 50.00 8.22 0.0 36.29 5.36 R
2311 2836 1.680522 CTGTACAGGCTCTCCGGCAT 61.681 60.00 15.49 0.0 41.46 4.40 R
2409 2934 1.433053 CGAACTGTTTCACCACGGCA 61.433 55.00 0.00 0.0 0.00 5.69 R
2688 3229 4.541779 TGTTTTATTTGCCGTGCAGTAAG 58.458 39.13 0.00 0.0 40.61 2.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.815401 ACCAGATGTACAACTGTCAAAGC 59.185 43.478 25.88 0.00 32.93 3.51
23 24 3.814842 CCAGATGTACAACTGTCAAAGCA 59.185 43.478 25.88 0.00 32.93 3.91
24 25 4.083643 CCAGATGTACAACTGTCAAAGCAG 60.084 45.833 25.88 9.15 41.92 4.24
32 33 3.004752 ACTGTCAAAGCAGTTGGAACT 57.995 42.857 0.84 0.00 46.45 3.01
45 46 5.529581 AGTTGGAACTGGTTTACCAAATG 57.470 39.130 2.81 0.00 46.97 2.32
46 47 5.205056 AGTTGGAACTGGTTTACCAAATGA 58.795 37.500 2.81 0.00 46.97 2.57
47 48 5.838521 AGTTGGAACTGGTTTACCAAATGAT 59.161 36.000 2.81 0.00 46.97 2.45
48 49 6.326323 AGTTGGAACTGGTTTACCAAATGATT 59.674 34.615 2.81 0.00 46.97 2.57
49 50 6.095432 TGGAACTGGTTTACCAAATGATTG 57.905 37.500 2.81 0.00 46.97 2.67
50 51 5.600484 TGGAACTGGTTTACCAAATGATTGT 59.400 36.000 2.81 0.00 46.97 2.71
51 52 6.156519 GGAACTGGTTTACCAAATGATTGTC 58.843 40.000 2.81 0.00 46.97 3.18
52 53 6.015434 GGAACTGGTTTACCAAATGATTGTCT 60.015 38.462 2.81 0.00 46.97 3.41
53 54 6.976934 ACTGGTTTACCAAATGATTGTCTT 57.023 33.333 2.81 0.00 46.97 3.01
54 55 6.981722 ACTGGTTTACCAAATGATTGTCTTC 58.018 36.000 2.81 0.00 46.97 2.87
55 56 6.549364 ACTGGTTTACCAAATGATTGTCTTCA 59.451 34.615 2.81 0.00 46.97 3.02
56 57 6.744112 TGGTTTACCAAATGATTGTCTTCAC 58.256 36.000 0.00 0.00 44.35 3.18
57 58 6.549364 TGGTTTACCAAATGATTGTCTTCACT 59.451 34.615 0.00 0.00 44.35 3.41
58 59 7.721842 TGGTTTACCAAATGATTGTCTTCACTA 59.278 33.333 0.00 0.00 44.35 2.74
59 60 8.573035 GGTTTACCAAATGATTGTCTTCACTAA 58.427 33.333 0.00 0.00 34.60 2.24
60 61 9.612620 GTTTACCAAATGATTGTCTTCACTAAG 57.387 33.333 0.00 0.00 34.60 2.18
61 62 6.259550 ACCAAATGATTGTCTTCACTAAGC 57.740 37.500 0.00 0.00 34.60 3.09
62 63 6.006449 ACCAAATGATTGTCTTCACTAAGCT 58.994 36.000 0.00 0.00 34.60 3.74
63 64 6.491403 ACCAAATGATTGTCTTCACTAAGCTT 59.509 34.615 3.48 3.48 34.60 3.74
64 65 7.665559 ACCAAATGATTGTCTTCACTAAGCTTA 59.334 33.333 5.94 5.94 34.60 3.09
65 66 7.965107 CCAAATGATTGTCTTCACTAAGCTTAC 59.035 37.037 0.86 0.00 34.60 2.34
66 67 8.725148 CAAATGATTGTCTTCACTAAGCTTACT 58.275 33.333 0.86 0.00 32.36 2.24
67 68 7.840342 ATGATTGTCTTCACTAAGCTTACTG 57.160 36.000 0.86 4.44 32.36 2.74
68 69 6.166279 TGATTGTCTTCACTAAGCTTACTGG 58.834 40.000 0.86 0.00 32.36 4.00
69 70 5.546621 TTGTCTTCACTAAGCTTACTGGT 57.453 39.130 0.86 0.00 32.36 4.00
70 71 5.546621 TGTCTTCACTAAGCTTACTGGTT 57.453 39.130 0.86 0.00 39.89 3.67
71 72 5.539048 TGTCTTCACTAAGCTTACTGGTTC 58.461 41.667 0.86 0.00 37.56 3.62
72 73 5.304614 TGTCTTCACTAAGCTTACTGGTTCT 59.695 40.000 0.86 0.00 37.56 3.01
73 74 6.492429 TGTCTTCACTAAGCTTACTGGTTCTA 59.508 38.462 0.86 0.00 37.56 2.10
74 75 7.178628 TGTCTTCACTAAGCTTACTGGTTCTAT 59.821 37.037 0.86 0.00 37.56 1.98
75 76 8.035984 GTCTTCACTAAGCTTACTGGTTCTATT 58.964 37.037 0.86 0.00 37.56 1.73
76 77 8.594550 TCTTCACTAAGCTTACTGGTTCTATTT 58.405 33.333 0.86 0.00 37.56 1.40
77 78 8.773404 TTCACTAAGCTTACTGGTTCTATTTC 57.227 34.615 0.86 0.00 37.56 2.17
78 79 7.328737 TCACTAAGCTTACTGGTTCTATTTCC 58.671 38.462 0.86 0.00 37.56 3.13
79 80 6.539103 CACTAAGCTTACTGGTTCTATTTCCC 59.461 42.308 0.86 0.00 37.56 3.97
80 81 4.505324 AGCTTACTGGTTCTATTTCCCC 57.495 45.455 0.00 0.00 0.00 4.81
81 82 3.850173 AGCTTACTGGTTCTATTTCCCCA 59.150 43.478 0.00 0.00 0.00 4.96
82 83 3.945921 GCTTACTGGTTCTATTTCCCCAC 59.054 47.826 0.00 0.00 0.00 4.61
83 84 4.524053 CTTACTGGTTCTATTTCCCCACC 58.476 47.826 0.00 0.00 0.00 4.61
84 85 1.639108 ACTGGTTCTATTTCCCCACCC 59.361 52.381 0.00 0.00 0.00 4.61
85 86 1.004436 TGGTTCTATTTCCCCACCCC 58.996 55.000 0.00 0.00 0.00 4.95
86 87 0.260816 GGTTCTATTTCCCCACCCCC 59.739 60.000 0.00 0.00 0.00 5.40
87 88 1.305886 GTTCTATTTCCCCACCCCCT 58.694 55.000 0.00 0.00 0.00 4.79
88 89 1.644337 GTTCTATTTCCCCACCCCCTT 59.356 52.381 0.00 0.00 0.00 3.95
89 90 1.603634 TCTATTTCCCCACCCCCTTC 58.396 55.000 0.00 0.00 0.00 3.46
90 91 1.203635 TCTATTTCCCCACCCCCTTCA 60.204 52.381 0.00 0.00 0.00 3.02
91 92 1.859574 CTATTTCCCCACCCCCTTCAT 59.140 52.381 0.00 0.00 0.00 2.57
92 93 1.101195 ATTTCCCCACCCCCTTCATT 58.899 50.000 0.00 0.00 0.00 2.57
93 94 0.871024 TTTCCCCACCCCCTTCATTT 59.129 50.000 0.00 0.00 0.00 2.32
94 95 0.411848 TTCCCCACCCCCTTCATTTC 59.588 55.000 0.00 0.00 0.00 2.17
95 96 1.001631 CCCCACCCCCTTCATTTCC 59.998 63.158 0.00 0.00 0.00 3.13
96 97 1.518431 CCCCACCCCCTTCATTTCCT 61.518 60.000 0.00 0.00 0.00 3.36
97 98 0.033109 CCCACCCCCTTCATTTCCTC 60.033 60.000 0.00 0.00 0.00 3.71
98 99 0.704076 CCACCCCCTTCATTTCCTCA 59.296 55.000 0.00 0.00 0.00 3.86
99 100 1.288932 CCACCCCCTTCATTTCCTCAT 59.711 52.381 0.00 0.00 0.00 2.90
100 101 2.292455 CCACCCCCTTCATTTCCTCATT 60.292 50.000 0.00 0.00 0.00 2.57
101 102 3.052944 CCACCCCCTTCATTTCCTCATTA 60.053 47.826 0.00 0.00 0.00 1.90
102 103 3.954258 CACCCCCTTCATTTCCTCATTAC 59.046 47.826 0.00 0.00 0.00 1.89
103 104 3.858638 ACCCCCTTCATTTCCTCATTACT 59.141 43.478 0.00 0.00 0.00 2.24
104 105 4.210331 CCCCCTTCATTTCCTCATTACTG 58.790 47.826 0.00 0.00 0.00 2.74
105 106 4.325344 CCCCCTTCATTTCCTCATTACTGT 60.325 45.833 0.00 0.00 0.00 3.55
106 107 4.641989 CCCCTTCATTTCCTCATTACTGTG 59.358 45.833 0.00 0.00 0.00 3.66
107 108 5.256474 CCCTTCATTTCCTCATTACTGTGT 58.744 41.667 0.00 0.00 0.00 3.72
108 109 5.711976 CCCTTCATTTCCTCATTACTGTGTT 59.288 40.000 0.00 0.00 0.00 3.32
109 110 6.349611 CCCTTCATTTCCTCATTACTGTGTTG 60.350 42.308 0.00 0.00 0.00 3.33
110 111 6.207417 CCTTCATTTCCTCATTACTGTGTTGT 59.793 38.462 0.00 0.00 0.00 3.32
111 112 6.558771 TCATTTCCTCATTACTGTGTTGTG 57.441 37.500 0.00 0.00 0.00 3.33
112 113 6.061441 TCATTTCCTCATTACTGTGTTGTGT 58.939 36.000 0.00 0.00 0.00 3.72
113 114 5.749596 TTTCCTCATTACTGTGTTGTGTG 57.250 39.130 0.00 0.00 0.00 3.82
114 115 3.138304 TCCTCATTACTGTGTTGTGTGC 58.862 45.455 0.00 0.00 0.00 4.57
115 116 3.141398 CCTCATTACTGTGTTGTGTGCT 58.859 45.455 0.00 0.00 0.00 4.40
116 117 3.565482 CCTCATTACTGTGTTGTGTGCTT 59.435 43.478 0.00 0.00 0.00 3.91
117 118 4.530388 CTCATTACTGTGTTGTGTGCTTG 58.470 43.478 0.00 0.00 0.00 4.01
118 119 3.944650 TCATTACTGTGTTGTGTGCTTGT 59.055 39.130 0.00 0.00 0.00 3.16
119 120 4.397730 TCATTACTGTGTTGTGTGCTTGTT 59.602 37.500 0.00 0.00 0.00 2.83
120 121 2.919666 ACTGTGTTGTGTGCTTGTTC 57.080 45.000 0.00 0.00 0.00 3.18
121 122 1.130373 ACTGTGTTGTGTGCTTGTTCG 59.870 47.619 0.00 0.00 0.00 3.95
122 123 1.130373 CTGTGTTGTGTGCTTGTTCGT 59.870 47.619 0.00 0.00 0.00 3.85
123 124 2.347731 TGTGTTGTGTGCTTGTTCGTA 58.652 42.857 0.00 0.00 0.00 3.43
124 125 2.939756 TGTGTTGTGTGCTTGTTCGTAT 59.060 40.909 0.00 0.00 0.00 3.06
125 126 3.001838 TGTGTTGTGTGCTTGTTCGTATC 59.998 43.478 0.00 0.00 0.00 2.24
126 127 3.247648 GTGTTGTGTGCTTGTTCGTATCT 59.752 43.478 0.00 0.00 0.00 1.98
127 128 3.247411 TGTTGTGTGCTTGTTCGTATCTG 59.753 43.478 0.00 0.00 0.00 2.90
128 129 3.106242 TGTGTGCTTGTTCGTATCTGT 57.894 42.857 0.00 0.00 0.00 3.41
129 130 3.462982 TGTGTGCTTGTTCGTATCTGTT 58.537 40.909 0.00 0.00 0.00 3.16
130 131 3.874543 TGTGTGCTTGTTCGTATCTGTTT 59.125 39.130 0.00 0.00 0.00 2.83
131 132 4.211389 GTGTGCTTGTTCGTATCTGTTTG 58.789 43.478 0.00 0.00 0.00 2.93
132 133 4.025229 GTGTGCTTGTTCGTATCTGTTTGA 60.025 41.667 0.00 0.00 0.00 2.69
133 134 4.572795 TGTGCTTGTTCGTATCTGTTTGAA 59.427 37.500 0.00 0.00 0.00 2.69
134 135 5.140177 GTGCTTGTTCGTATCTGTTTGAAG 58.860 41.667 0.00 0.00 0.00 3.02
135 136 4.213270 TGCTTGTTCGTATCTGTTTGAAGG 59.787 41.667 0.00 0.00 0.00 3.46
136 137 4.712763 CTTGTTCGTATCTGTTTGAAGGC 58.287 43.478 0.00 0.00 0.00 4.35
137 138 4.002906 TGTTCGTATCTGTTTGAAGGCT 57.997 40.909 0.00 0.00 0.00 4.58
138 139 4.385825 TGTTCGTATCTGTTTGAAGGCTT 58.614 39.130 0.00 0.00 0.00 4.35
139 140 4.819630 TGTTCGTATCTGTTTGAAGGCTTT 59.180 37.500 0.00 0.00 0.00 3.51
140 141 5.147162 GTTCGTATCTGTTTGAAGGCTTTG 58.853 41.667 0.00 0.00 0.00 2.77
141 142 4.637276 TCGTATCTGTTTGAAGGCTTTGA 58.363 39.130 0.00 0.00 0.00 2.69
142 143 4.451096 TCGTATCTGTTTGAAGGCTTTGAC 59.549 41.667 0.00 1.44 0.00 3.18
143 144 4.452455 CGTATCTGTTTGAAGGCTTTGACT 59.548 41.667 0.00 0.00 0.00 3.41
144 145 4.843220 ATCTGTTTGAAGGCTTTGACTG 57.157 40.909 0.00 5.33 0.00 3.51
145 146 3.884895 TCTGTTTGAAGGCTTTGACTGA 58.115 40.909 0.00 7.50 0.00 3.41
146 147 4.269183 TCTGTTTGAAGGCTTTGACTGAA 58.731 39.130 0.00 0.00 0.00 3.02
147 148 4.336433 TCTGTTTGAAGGCTTTGACTGAAG 59.664 41.667 0.00 0.00 0.00 3.02
148 149 4.269183 TGTTTGAAGGCTTTGACTGAAGA 58.731 39.130 0.00 0.00 0.00 2.87
149 150 4.096382 TGTTTGAAGGCTTTGACTGAAGAC 59.904 41.667 0.00 0.00 34.76 3.01
150 151 3.845781 TGAAGGCTTTGACTGAAGACT 57.154 42.857 0.00 0.00 46.90 3.24
154 155 4.429854 AGGCTTTGACTGAAGACTTTCT 57.570 40.909 0.00 0.00 42.33 2.52
155 156 4.786425 AGGCTTTGACTGAAGACTTTCTT 58.214 39.130 0.00 0.00 42.33 2.52
156 157 5.930135 AGGCTTTGACTGAAGACTTTCTTA 58.070 37.500 0.00 0.00 42.33 2.10
157 158 6.357367 AGGCTTTGACTGAAGACTTTCTTAA 58.643 36.000 0.00 0.00 42.33 1.85
158 159 7.001073 AGGCTTTGACTGAAGACTTTCTTAAT 58.999 34.615 0.00 0.00 42.33 1.40
159 160 7.503902 AGGCTTTGACTGAAGACTTTCTTAATT 59.496 33.333 0.00 0.00 42.33 1.40
160 161 8.138074 GGCTTTGACTGAAGACTTTCTTAATTT 58.862 33.333 0.00 0.00 36.73 1.82
161 162 9.521503 GCTTTGACTGAAGACTTTCTTAATTTT 57.478 29.630 0.00 0.00 36.73 1.82
197 198 9.750125 ATTTCTTAAGTTTGTTTGTCTTCATCC 57.250 29.630 1.63 0.00 0.00 3.51
198 199 8.519799 TTCTTAAGTTTGTTTGTCTTCATCCT 57.480 30.769 1.63 0.00 0.00 3.24
199 200 8.519799 TCTTAAGTTTGTTTGTCTTCATCCTT 57.480 30.769 1.63 0.00 0.00 3.36
200 201 8.966868 TCTTAAGTTTGTTTGTCTTCATCCTTT 58.033 29.630 1.63 0.00 0.00 3.11
201 202 9.586435 CTTAAGTTTGTTTGTCTTCATCCTTTT 57.414 29.630 0.00 0.00 0.00 2.27
202 203 9.936759 TTAAGTTTGTTTGTCTTCATCCTTTTT 57.063 25.926 0.00 0.00 0.00 1.94
234 235 7.050281 GTGCTTACACTTTCTGTACTATGTG 57.950 40.000 0.00 1.75 43.85 3.21
235 236 6.645415 GTGCTTACACTTTCTGTACTATGTGT 59.355 38.462 14.39 14.39 43.85 3.72
236 237 6.866770 TGCTTACACTTTCTGTACTATGTGTC 59.133 38.462 13.78 5.88 39.09 3.67
237 238 7.091443 GCTTACACTTTCTGTACTATGTGTCT 58.909 38.462 13.78 1.10 39.09 3.41
238 239 7.599245 GCTTACACTTTCTGTACTATGTGTCTT 59.401 37.037 13.78 0.64 39.09 3.01
239 240 8.812147 TTACACTTTCTGTACTATGTGTCTTG 57.188 34.615 13.78 0.00 39.09 3.02
240 241 6.817184 ACACTTTCTGTACTATGTGTCTTGT 58.183 36.000 0.00 0.00 34.10 3.16
241 242 7.272978 ACACTTTCTGTACTATGTGTCTTGTT 58.727 34.615 0.00 0.00 34.10 2.83
242 243 7.769044 ACACTTTCTGTACTATGTGTCTTGTTT 59.231 33.333 0.00 0.00 34.10 2.83
243 244 8.612619 CACTTTCTGTACTATGTGTCTTGTTTT 58.387 33.333 0.00 0.00 0.00 2.43
244 245 9.174166 ACTTTCTGTACTATGTGTCTTGTTTTT 57.826 29.630 0.00 0.00 0.00 1.94
261 262 9.859427 TCTTGTTTTTAATTCATCATGATGTCC 57.141 29.630 30.01 12.14 39.72 4.02
262 263 9.642327 CTTGTTTTTAATTCATCATGATGTCCA 57.358 29.630 30.01 18.12 39.72 4.02
274 275 5.959618 CATGATGTCCATGCTTATGTCAT 57.040 39.130 0.00 0.00 45.25 3.06
275 276 5.699839 CATGATGTCCATGCTTATGTCATG 58.300 41.667 0.00 0.00 45.25 3.07
276 277 4.784177 TGATGTCCATGCTTATGTCATGT 58.216 39.130 0.00 0.00 39.60 3.21
277 278 4.818005 TGATGTCCATGCTTATGTCATGTC 59.182 41.667 0.00 0.00 39.60 3.06
278 279 4.219264 TGTCCATGCTTATGTCATGTCA 57.781 40.909 0.00 0.00 39.60 3.58
279 280 4.784177 TGTCCATGCTTATGTCATGTCAT 58.216 39.130 10.31 10.31 39.60 3.06
280 281 4.577283 TGTCCATGCTTATGTCATGTCATG 59.423 41.667 14.65 6.47 39.60 3.07
281 282 4.577693 GTCCATGCTTATGTCATGTCATGT 59.422 41.667 14.65 0.00 39.60 3.21
282 283 4.818005 TCCATGCTTATGTCATGTCATGTC 59.182 41.667 14.65 7.84 39.60 3.06
283 284 4.820173 CCATGCTTATGTCATGTCATGTCT 59.180 41.667 14.65 1.99 39.60 3.41
284 285 5.277828 CCATGCTTATGTCATGTCATGTCTG 60.278 44.000 14.65 5.99 39.60 3.51
285 286 3.624410 TGCTTATGTCATGTCATGTCTGC 59.376 43.478 14.65 12.57 0.00 4.26
286 287 3.624410 GCTTATGTCATGTCATGTCTGCA 59.376 43.478 14.65 8.24 0.00 4.41
287 288 4.275196 GCTTATGTCATGTCATGTCTGCAT 59.725 41.667 14.65 13.64 35.32 3.96
288 289 5.560375 GCTTATGTCATGTCATGTCTGCATC 60.560 44.000 14.65 0.00 31.99 3.91
289 290 3.622166 TGTCATGTCATGTCTGCATCT 57.378 42.857 12.54 0.00 31.99 2.90
290 291 3.267483 TGTCATGTCATGTCTGCATCTG 58.733 45.455 12.54 0.00 31.99 2.90
291 292 3.055675 TGTCATGTCATGTCTGCATCTGA 60.056 43.478 12.54 0.00 31.99 3.27
292 293 3.556365 GTCATGTCATGTCTGCATCTGAG 59.444 47.826 12.54 0.00 31.99 3.35
293 294 3.197116 TCATGTCATGTCTGCATCTGAGT 59.803 43.478 12.54 0.00 31.99 3.41
294 295 4.403432 TCATGTCATGTCTGCATCTGAGTA 59.597 41.667 12.54 0.00 31.99 2.59
295 296 4.115401 TGTCATGTCTGCATCTGAGTAC 57.885 45.455 0.00 0.00 31.99 2.73
296 297 3.766051 TGTCATGTCTGCATCTGAGTACT 59.234 43.478 0.00 0.00 31.99 2.73
297 298 4.221482 TGTCATGTCTGCATCTGAGTACTT 59.779 41.667 0.00 0.00 31.99 2.24
298 299 5.418840 TGTCATGTCTGCATCTGAGTACTTA 59.581 40.000 0.00 0.00 31.99 2.24
299 300 6.097412 TGTCATGTCTGCATCTGAGTACTTAT 59.903 38.462 0.00 0.00 31.99 1.73
300 301 6.983307 GTCATGTCTGCATCTGAGTACTTATT 59.017 38.462 0.00 0.00 31.99 1.40
301 302 7.168972 GTCATGTCTGCATCTGAGTACTTATTC 59.831 40.741 0.00 0.00 31.99 1.75
302 303 5.907207 TGTCTGCATCTGAGTACTTATTCC 58.093 41.667 0.00 0.00 0.00 3.01
303 304 4.979197 GTCTGCATCTGAGTACTTATTCCG 59.021 45.833 0.00 0.00 0.00 4.30
304 305 3.717707 TGCATCTGAGTACTTATTCCGC 58.282 45.455 0.00 0.00 0.00 5.54
305 306 3.384789 TGCATCTGAGTACTTATTCCGCT 59.615 43.478 0.00 0.00 0.00 5.52
306 307 3.738282 GCATCTGAGTACTTATTCCGCTG 59.262 47.826 0.00 0.00 0.00 5.18
307 308 3.438297 TCTGAGTACTTATTCCGCTGC 57.562 47.619 0.00 0.00 0.00 5.25
308 309 2.758423 TCTGAGTACTTATTCCGCTGCA 59.242 45.455 0.00 0.00 0.00 4.41
309 310 3.194755 TCTGAGTACTTATTCCGCTGCAA 59.805 43.478 0.00 0.00 0.00 4.08
310 311 3.521560 TGAGTACTTATTCCGCTGCAAG 58.478 45.455 0.00 0.00 0.00 4.01
311 312 3.056107 TGAGTACTTATTCCGCTGCAAGT 60.056 43.478 0.00 4.02 35.30 3.16
312 313 4.158949 TGAGTACTTATTCCGCTGCAAGTA 59.841 41.667 0.00 3.00 35.30 2.24
313 314 4.683832 AGTACTTATTCCGCTGCAAGTAG 58.316 43.478 9.07 0.00 34.93 2.57
314 315 3.611766 ACTTATTCCGCTGCAAGTAGT 57.388 42.857 0.00 0.00 35.30 2.73
315 316 3.939066 ACTTATTCCGCTGCAAGTAGTT 58.061 40.909 0.00 0.00 35.30 2.24
316 317 3.933332 ACTTATTCCGCTGCAAGTAGTTC 59.067 43.478 0.00 0.00 35.30 3.01
317 318 2.770164 ATTCCGCTGCAAGTAGTTCT 57.230 45.000 0.00 0.00 35.30 3.01
318 319 2.543777 TTCCGCTGCAAGTAGTTCTT 57.456 45.000 0.00 0.00 35.30 2.52
319 320 2.080286 TCCGCTGCAAGTAGTTCTTC 57.920 50.000 0.00 0.00 35.30 2.87
320 321 0.716108 CCGCTGCAAGTAGTTCTTCG 59.284 55.000 0.00 0.00 35.30 3.79
321 322 0.093705 CGCTGCAAGTAGTTCTTCGC 59.906 55.000 0.00 0.00 35.30 4.70
322 323 1.433534 GCTGCAAGTAGTTCTTCGCT 58.566 50.000 0.00 0.00 35.30 4.93
323 324 1.391826 GCTGCAAGTAGTTCTTCGCTC 59.608 52.381 0.00 0.00 35.30 5.03
324 325 2.677199 CTGCAAGTAGTTCTTCGCTCA 58.323 47.619 0.00 0.00 33.63 4.26
325 326 2.665537 CTGCAAGTAGTTCTTCGCTCAG 59.334 50.000 0.00 0.00 33.63 3.35
326 327 1.996191 GCAAGTAGTTCTTCGCTCAGG 59.004 52.381 0.00 0.00 33.63 3.86
327 328 2.352814 GCAAGTAGTTCTTCGCTCAGGA 60.353 50.000 0.00 0.00 33.63 3.86
328 329 3.861131 GCAAGTAGTTCTTCGCTCAGGAA 60.861 47.826 0.00 0.00 33.63 3.36
329 330 4.499183 CAAGTAGTTCTTCGCTCAGGAAT 58.501 43.478 0.00 0.00 33.63 3.01
330 331 4.810191 AGTAGTTCTTCGCTCAGGAATT 57.190 40.909 0.00 0.00 0.00 2.17
331 332 5.153950 AGTAGTTCTTCGCTCAGGAATTT 57.846 39.130 0.00 0.00 0.00 1.82
332 333 5.172205 AGTAGTTCTTCGCTCAGGAATTTC 58.828 41.667 0.00 0.00 0.00 2.17
333 334 3.339141 AGTTCTTCGCTCAGGAATTTCC 58.661 45.455 7.39 7.39 36.58 3.13
335 336 3.252974 TCTTCGCTCAGGAATTTCCTC 57.747 47.619 15.24 3.93 45.66 3.71
336 337 2.567169 TCTTCGCTCAGGAATTTCCTCA 59.433 45.455 15.24 1.30 45.66 3.86
337 338 2.386661 TCGCTCAGGAATTTCCTCAC 57.613 50.000 15.24 6.86 45.66 3.51
338 339 1.066143 TCGCTCAGGAATTTCCTCACC 60.066 52.381 15.24 5.50 45.66 4.02
339 340 1.756430 GCTCAGGAATTTCCTCACCC 58.244 55.000 15.24 1.19 45.66 4.61
340 341 1.283321 GCTCAGGAATTTCCTCACCCT 59.717 52.381 15.24 0.00 45.66 4.34
341 342 2.943199 GCTCAGGAATTTCCTCACCCTG 60.943 54.545 15.24 4.52 45.66 4.45
342 343 2.573462 CTCAGGAATTTCCTCACCCTGA 59.427 50.000 15.24 8.53 45.66 3.86
343 344 2.986019 TCAGGAATTTCCTCACCCTGAA 59.014 45.455 15.24 0.00 45.66 3.02
344 345 3.397618 TCAGGAATTTCCTCACCCTGAAA 59.602 43.478 15.24 0.00 45.66 2.69
345 346 4.044571 TCAGGAATTTCCTCACCCTGAAAT 59.955 41.667 15.24 0.00 45.66 2.17
346 347 4.774200 CAGGAATTTCCTCACCCTGAAATT 59.226 41.667 15.24 9.29 45.66 1.82
347 348 5.019470 AGGAATTTCCTCACCCTGAAATTC 58.981 41.667 21.03 21.03 45.66 2.17
349 350 4.682021 ATTTCCTCACCCTGAAATTCCT 57.318 40.909 0.00 0.00 37.82 3.36
350 351 3.721087 TTCCTCACCCTGAAATTCCTC 57.279 47.619 0.00 0.00 0.00 3.71
351 352 2.631384 TCCTCACCCTGAAATTCCTCA 58.369 47.619 0.00 0.00 0.00 3.86
352 353 2.573462 TCCTCACCCTGAAATTCCTCAG 59.427 50.000 0.81 0.81 42.19 3.35
353 354 2.307098 CCTCACCCTGAAATTCCTCAGT 59.693 50.000 6.44 0.00 41.15 3.41
354 355 3.519510 CCTCACCCTGAAATTCCTCAGTA 59.480 47.826 6.44 0.00 41.15 2.74
355 356 4.019321 CCTCACCCTGAAATTCCTCAGTAA 60.019 45.833 6.44 0.00 41.15 2.24
356 357 5.514834 CCTCACCCTGAAATTCCTCAGTAAA 60.515 44.000 6.44 0.00 41.15 2.01
357 358 5.560724 TCACCCTGAAATTCCTCAGTAAAG 58.439 41.667 6.44 0.00 41.15 1.85
358 359 5.309543 TCACCCTGAAATTCCTCAGTAAAGA 59.690 40.000 6.44 0.00 41.15 2.52
359 360 6.003950 CACCCTGAAATTCCTCAGTAAAGAA 58.996 40.000 6.44 0.00 41.15 2.52
360 361 6.660949 CACCCTGAAATTCCTCAGTAAAGAAT 59.339 38.462 6.44 0.00 41.15 2.40
361 362 7.177392 CACCCTGAAATTCCTCAGTAAAGAATT 59.823 37.037 6.44 0.00 41.15 2.17
363 364 9.243105 CCCTGAAATTCCTCAGTAAAGAATTTA 57.757 33.333 9.27 0.00 45.50 1.40
385 386 8.454570 TTTATAAAAATCGTCTATTCACCCCC 57.545 34.615 0.00 0.00 0.00 5.40
402 403 1.674962 CCCCCTCTAGTCGACTTAACG 59.325 57.143 25.44 10.17 0.00 3.18
403 404 1.065251 CCCCTCTAGTCGACTTAACGC 59.935 57.143 25.44 0.00 0.00 4.84
404 405 1.741706 CCCTCTAGTCGACTTAACGCA 59.258 52.381 25.44 2.97 0.00 5.24
405 406 2.477525 CCCTCTAGTCGACTTAACGCAC 60.478 54.545 25.44 0.00 0.00 5.34
406 407 2.419324 CCTCTAGTCGACTTAACGCACT 59.581 50.000 25.44 0.00 0.00 4.40
407 408 3.119919 CCTCTAGTCGACTTAACGCACTT 60.120 47.826 25.44 0.00 0.00 3.16
408 409 4.474113 CTCTAGTCGACTTAACGCACTTT 58.526 43.478 25.44 0.00 0.00 2.66
409 410 4.470462 TCTAGTCGACTTAACGCACTTTC 58.530 43.478 25.44 0.00 0.00 2.62
410 411 3.088194 AGTCGACTTAACGCACTTTCA 57.912 42.857 13.58 0.00 0.00 2.69
411 412 3.050619 AGTCGACTTAACGCACTTTCAG 58.949 45.455 13.58 0.00 0.00 3.02
412 413 2.155155 GTCGACTTAACGCACTTTCAGG 59.845 50.000 8.70 0.00 0.00 3.86
413 414 2.034939 TCGACTTAACGCACTTTCAGGA 59.965 45.455 0.00 0.00 0.00 3.86
414 415 2.798283 CGACTTAACGCACTTTCAGGAA 59.202 45.455 0.00 0.00 0.00 3.36
415 416 3.120991 CGACTTAACGCACTTTCAGGAAG 60.121 47.826 0.00 0.00 41.32 3.46
417 418 4.952460 ACTTAACGCACTTTCAGGAAGTA 58.048 39.130 0.00 0.00 46.75 2.24
418 419 5.548406 ACTTAACGCACTTTCAGGAAGTAT 58.452 37.500 0.00 0.00 46.75 2.12
419 420 5.638234 ACTTAACGCACTTTCAGGAAGTATC 59.362 40.000 0.00 0.00 46.75 2.24
420 421 2.607187 ACGCACTTTCAGGAAGTATCG 58.393 47.619 11.81 11.81 46.75 2.92
421 422 2.230508 ACGCACTTTCAGGAAGTATCGA 59.769 45.455 17.67 0.00 46.75 3.59
422 423 3.250744 CGCACTTTCAGGAAGTATCGAA 58.749 45.455 8.92 0.00 46.75 3.71
423 424 3.678072 CGCACTTTCAGGAAGTATCGAAA 59.322 43.478 8.92 0.00 46.75 3.46
424 425 4.151689 CGCACTTTCAGGAAGTATCGAAAA 59.848 41.667 8.92 0.00 46.75 2.29
425 426 5.333798 CGCACTTTCAGGAAGTATCGAAAAA 60.334 40.000 8.92 0.00 46.75 1.94
426 427 6.612306 GCACTTTCAGGAAGTATCGAAAAAT 58.388 36.000 0.00 0.00 46.75 1.82
427 428 6.524586 GCACTTTCAGGAAGTATCGAAAAATG 59.475 38.462 0.00 0.00 46.75 2.32
428 429 7.573096 GCACTTTCAGGAAGTATCGAAAAATGA 60.573 37.037 0.00 0.00 46.75 2.57
429 430 8.289618 CACTTTCAGGAAGTATCGAAAAATGAA 58.710 33.333 0.00 0.00 46.75 2.57
430 431 8.846211 ACTTTCAGGAAGTATCGAAAAATGAAA 58.154 29.630 0.00 0.11 46.61 2.69
431 432 9.118236 CTTTCAGGAAGTATCGAAAAATGAAAC 57.882 33.333 0.00 0.00 32.48 2.78
432 433 6.827641 TCAGGAAGTATCGAAAAATGAAACG 58.172 36.000 0.00 0.00 0.00 3.60
433 434 6.425721 TCAGGAAGTATCGAAAAATGAAACGT 59.574 34.615 0.00 0.00 0.00 3.99
434 435 6.519761 CAGGAAGTATCGAAAAATGAAACGTG 59.480 38.462 0.00 0.00 0.00 4.49
435 436 6.204108 AGGAAGTATCGAAAAATGAAACGTGT 59.796 34.615 0.00 0.00 0.00 4.49
436 437 6.302313 GGAAGTATCGAAAAATGAAACGTGTG 59.698 38.462 0.00 0.00 0.00 3.82
437 438 6.533819 AGTATCGAAAAATGAAACGTGTGA 57.466 33.333 0.00 0.00 0.00 3.58
438 439 7.129109 AGTATCGAAAAATGAAACGTGTGAT 57.871 32.000 0.00 0.00 0.00 3.06
439 440 7.581476 AGTATCGAAAAATGAAACGTGTGATT 58.419 30.769 0.00 0.00 0.00 2.57
440 441 8.714179 AGTATCGAAAAATGAAACGTGTGATTA 58.286 29.630 0.00 0.00 0.00 1.75
441 442 9.320406 GTATCGAAAAATGAAACGTGTGATTAA 57.680 29.630 0.00 0.00 0.00 1.40
442 443 8.964420 ATCGAAAAATGAAACGTGTGATTAAT 57.036 26.923 0.00 0.00 0.00 1.40
443 444 8.789881 TCGAAAAATGAAACGTGTGATTAATT 57.210 26.923 0.00 0.00 0.00 1.40
444 445 8.686418 TCGAAAAATGAAACGTGTGATTAATTG 58.314 29.630 0.00 0.00 0.00 2.32
445 446 8.476142 CGAAAAATGAAACGTGTGATTAATTGT 58.524 29.630 0.00 0.00 0.00 2.71
449 450 8.909708 AATGAAACGTGTGATTAATTGTATGG 57.090 30.769 0.00 0.00 0.00 2.74
450 451 6.847400 TGAAACGTGTGATTAATTGTATGGG 58.153 36.000 0.00 0.00 0.00 4.00
451 452 6.655425 TGAAACGTGTGATTAATTGTATGGGA 59.345 34.615 0.00 0.00 0.00 4.37
452 453 6.677781 AACGTGTGATTAATTGTATGGGAG 57.322 37.500 0.00 0.00 0.00 4.30
453 454 5.123227 ACGTGTGATTAATTGTATGGGAGG 58.877 41.667 0.00 0.00 0.00 4.30
454 455 5.104693 ACGTGTGATTAATTGTATGGGAGGA 60.105 40.000 0.00 0.00 0.00 3.71
455 456 5.820423 CGTGTGATTAATTGTATGGGAGGAA 59.180 40.000 0.00 0.00 0.00 3.36
456 457 6.486657 CGTGTGATTAATTGTATGGGAGGAAT 59.513 38.462 0.00 0.00 0.00 3.01
457 458 7.520453 CGTGTGATTAATTGTATGGGAGGAATG 60.520 40.741 0.00 0.00 0.00 2.67
458 459 6.265196 TGTGATTAATTGTATGGGAGGAATGC 59.735 38.462 0.00 0.00 0.00 3.56
459 460 5.774690 TGATTAATTGTATGGGAGGAATGCC 59.225 40.000 0.00 0.00 0.00 4.40
460 461 3.686227 AATTGTATGGGAGGAATGCCA 57.314 42.857 0.00 0.00 36.29 4.92
461 462 2.435372 TTGTATGGGAGGAATGCCAC 57.565 50.000 0.00 0.00 36.29 5.01
462 463 0.550914 TGTATGGGAGGAATGCCACC 59.449 55.000 0.00 0.00 43.55 4.61
463 464 0.535102 GTATGGGAGGAATGCCACCG 60.535 60.000 0.00 0.00 45.06 4.94
464 465 0.692756 TATGGGAGGAATGCCACCGA 60.693 55.000 0.00 0.00 45.06 4.69
465 466 2.124695 GGGAGGAATGCCACCGAC 60.125 66.667 0.00 0.00 45.06 4.79
466 467 2.511600 GGAGGAATGCCACCGACG 60.512 66.667 0.00 0.00 35.12 5.12
467 468 2.577059 GAGGAATGCCACCGACGA 59.423 61.111 0.00 0.00 36.29 4.20
468 469 1.519455 GAGGAATGCCACCGACGAG 60.519 63.158 0.00 0.00 36.29 4.18
478 479 2.811317 CCGACGAGGTGCTTGCTC 60.811 66.667 0.00 0.00 34.51 4.26
479 480 3.175240 CGACGAGGTGCTTGCTCG 61.175 66.667 0.00 0.00 44.96 5.03
480 481 3.482783 GACGAGGTGCTTGCTCGC 61.483 66.667 0.00 0.00 43.48 5.03
483 484 2.738521 GAGGTGCTTGCTCGCGAA 60.739 61.111 11.33 0.00 0.00 4.70
484 485 2.280797 AGGTGCTTGCTCGCGAAA 60.281 55.556 11.33 0.79 0.00 3.46
485 486 1.841663 GAGGTGCTTGCTCGCGAAAA 61.842 55.000 11.33 7.01 0.00 2.29
486 487 1.441016 GGTGCTTGCTCGCGAAAAG 60.441 57.895 21.13 21.13 0.00 2.27
487 488 1.569493 GTGCTTGCTCGCGAAAAGA 59.431 52.632 26.79 13.88 0.00 2.52
488 489 0.166814 GTGCTTGCTCGCGAAAAGAT 59.833 50.000 26.79 0.00 0.00 2.40
489 490 0.166597 TGCTTGCTCGCGAAAAGATG 59.833 50.000 26.79 10.34 0.00 2.90
490 491 0.166814 GCTTGCTCGCGAAAAGATGT 59.833 50.000 26.79 0.00 0.00 3.06
491 492 1.788344 GCTTGCTCGCGAAAAGATGTC 60.788 52.381 26.79 11.25 0.00 3.06
492 493 1.728971 CTTGCTCGCGAAAAGATGTCT 59.271 47.619 20.95 0.00 0.00 3.41
493 494 1.350193 TGCTCGCGAAAAGATGTCTC 58.650 50.000 11.33 0.00 0.00 3.36
494 495 0.647925 GCTCGCGAAAAGATGTCTCC 59.352 55.000 11.33 0.00 0.00 3.71
495 496 1.996292 CTCGCGAAAAGATGTCTCCA 58.004 50.000 11.33 0.00 0.00 3.86
496 497 1.656095 CTCGCGAAAAGATGTCTCCAC 59.344 52.381 11.33 0.00 0.00 4.02
497 498 1.000394 TCGCGAAAAGATGTCTCCACA 60.000 47.619 6.20 0.00 36.78 4.17
498 499 1.798223 CGCGAAAAGATGTCTCCACAA 59.202 47.619 0.00 0.00 35.64 3.33
499 500 2.411547 CGCGAAAAGATGTCTCCACAAC 60.412 50.000 0.00 0.00 35.64 3.32
500 501 2.548057 GCGAAAAGATGTCTCCACAACA 59.452 45.455 0.00 0.00 35.64 3.33
501 502 3.607078 GCGAAAAGATGTCTCCACAACAC 60.607 47.826 0.00 0.00 35.64 3.32
502 503 3.559655 CGAAAAGATGTCTCCACAACACA 59.440 43.478 0.00 0.00 35.64 3.72
503 504 4.552767 CGAAAAGATGTCTCCACAACACAC 60.553 45.833 0.00 0.00 35.64 3.82
504 505 2.550830 AGATGTCTCCACAACACACC 57.449 50.000 0.00 0.00 35.64 4.16
505 506 1.072331 AGATGTCTCCACAACACACCC 59.928 52.381 0.00 0.00 35.64 4.61
506 507 1.072331 GATGTCTCCACAACACACCCT 59.928 52.381 0.00 0.00 35.64 4.34
507 508 0.916086 TGTCTCCACAACACACCCTT 59.084 50.000 0.00 0.00 0.00 3.95
508 509 1.283613 TGTCTCCACAACACACCCTTT 59.716 47.619 0.00 0.00 0.00 3.11
509 510 1.947456 GTCTCCACAACACACCCTTTC 59.053 52.381 0.00 0.00 0.00 2.62
510 511 1.562008 TCTCCACAACACACCCTTTCA 59.438 47.619 0.00 0.00 0.00 2.69
511 512 1.676006 CTCCACAACACACCCTTTCAC 59.324 52.381 0.00 0.00 0.00 3.18
512 513 0.744281 CCACAACACACCCTTTCACC 59.256 55.000 0.00 0.00 0.00 4.02
513 514 1.468985 CACAACACACCCTTTCACCA 58.531 50.000 0.00 0.00 0.00 4.17
514 515 2.031120 CACAACACACCCTTTCACCAT 58.969 47.619 0.00 0.00 0.00 3.55
515 516 2.031120 ACAACACACCCTTTCACCATG 58.969 47.619 0.00 0.00 0.00 3.66
516 517 2.031120 CAACACACCCTTTCACCATGT 58.969 47.619 0.00 0.00 0.00 3.21
517 518 3.218453 CAACACACCCTTTCACCATGTA 58.782 45.455 0.00 0.00 0.00 2.29
518 519 3.806949 ACACACCCTTTCACCATGTAT 57.193 42.857 0.00 0.00 0.00 2.29
519 520 4.919774 ACACACCCTTTCACCATGTATA 57.080 40.909 0.00 0.00 0.00 1.47
520 521 5.450818 ACACACCCTTTCACCATGTATAT 57.549 39.130 0.00 0.00 0.00 0.86
521 522 6.569127 ACACACCCTTTCACCATGTATATA 57.431 37.500 0.00 0.00 0.00 0.86
522 523 6.964464 ACACACCCTTTCACCATGTATATAA 58.036 36.000 0.00 0.00 0.00 0.98
523 524 7.054124 ACACACCCTTTCACCATGTATATAAG 58.946 38.462 0.00 0.00 0.00 1.73
524 525 7.054124 CACACCCTTTCACCATGTATATAAGT 58.946 38.462 0.00 0.00 0.00 2.24
525 526 7.012327 CACACCCTTTCACCATGTATATAAGTG 59.988 40.741 0.00 0.00 0.00 3.16
526 527 6.486657 CACCCTTTCACCATGTATATAAGTGG 59.513 42.308 11.34 11.34 37.74 4.00
527 528 6.003950 CCCTTTCACCATGTATATAAGTGGG 58.996 44.000 15.46 5.05 36.05 4.61
528 529 6.410388 CCCTTTCACCATGTATATAAGTGGGT 60.410 42.308 15.46 5.56 36.05 4.51
529 530 6.710744 CCTTTCACCATGTATATAAGTGGGTC 59.289 42.308 15.46 0.00 36.05 4.46
530 531 7.420214 CCTTTCACCATGTATATAAGTGGGTCT 60.420 40.741 15.46 0.00 36.05 3.85
531 532 6.665992 TCACCATGTATATAAGTGGGTCTC 57.334 41.667 15.46 0.00 36.05 3.36
532 533 5.542635 TCACCATGTATATAAGTGGGTCTCC 59.457 44.000 15.46 0.00 36.05 3.71
533 534 4.844655 ACCATGTATATAAGTGGGTCTCCC 59.155 45.833 15.46 0.00 45.71 4.30
542 543 4.841441 GGGTCTCCCACATTGCAA 57.159 55.556 0.00 0.00 44.65 4.08
543 544 3.288099 GGGTCTCCCACATTGCAAT 57.712 52.632 5.99 5.99 44.65 3.56
544 545 0.819582 GGGTCTCCCACATTGCAATG 59.180 55.000 32.74 32.74 44.65 2.82
545 546 1.616725 GGGTCTCCCACATTGCAATGA 60.617 52.381 38.99 19.95 44.65 2.57
546 547 2.170166 GGTCTCCCACATTGCAATGAA 58.830 47.619 38.99 21.89 39.67 2.57
547 548 2.562298 GGTCTCCCACATTGCAATGAAA 59.438 45.455 38.99 21.60 39.67 2.69
548 549 3.578688 GTCTCCCACATTGCAATGAAAC 58.421 45.455 38.99 23.20 39.67 2.78
549 550 3.256631 GTCTCCCACATTGCAATGAAACT 59.743 43.478 38.99 18.86 39.67 2.66
550 551 4.458989 GTCTCCCACATTGCAATGAAACTA 59.541 41.667 38.99 21.03 39.67 2.24
551 552 4.701651 TCTCCCACATTGCAATGAAACTAG 59.298 41.667 38.99 27.10 39.67 2.57
552 553 4.406456 TCCCACATTGCAATGAAACTAGT 58.594 39.130 38.99 17.11 39.67 2.57
553 554 4.218200 TCCCACATTGCAATGAAACTAGTG 59.782 41.667 38.99 25.66 39.67 2.74
554 555 4.218200 CCCACATTGCAATGAAACTAGTGA 59.782 41.667 38.99 0.00 39.67 3.41
555 556 5.278907 CCCACATTGCAATGAAACTAGTGAA 60.279 40.000 38.99 0.00 39.67 3.18
556 557 6.392354 CCACATTGCAATGAAACTAGTGAAT 58.608 36.000 38.99 14.53 39.67 2.57
557 558 6.869913 CCACATTGCAATGAAACTAGTGAATT 59.130 34.615 38.99 14.34 39.67 2.17
558 559 8.028354 CCACATTGCAATGAAACTAGTGAATTA 58.972 33.333 38.99 0.00 39.67 1.40
559 560 9.577110 CACATTGCAATGAAACTAGTGAATTAT 57.423 29.630 38.99 13.31 39.67 1.28
563 564 8.984891 TGCAATGAAACTAGTGAATTATTTGG 57.015 30.769 0.00 0.00 0.00 3.28
564 565 8.801299 TGCAATGAAACTAGTGAATTATTTGGA 58.199 29.630 0.00 0.00 0.00 3.53
565 566 9.076596 GCAATGAAACTAGTGAATTATTTGGAC 57.923 33.333 0.00 0.00 0.00 4.02
568 569 9.739276 ATGAAACTAGTGAATTATTTGGACTCA 57.261 29.630 0.00 0.00 0.00 3.41
569 570 9.739276 TGAAACTAGTGAATTATTTGGACTCAT 57.261 29.630 0.00 0.00 0.00 2.90
571 572 9.739276 AAACTAGTGAATTATTTGGACTCATCA 57.261 29.630 0.00 0.00 0.00 3.07
572 573 9.911788 AACTAGTGAATTATTTGGACTCATCAT 57.088 29.630 0.00 0.00 0.00 2.45
573 574 9.911788 ACTAGTGAATTATTTGGACTCATCATT 57.088 29.630 0.00 0.00 0.00 2.57
576 577 9.028284 AGTGAATTATTTGGACTCATCATTTGT 57.972 29.630 0.00 0.00 0.00 2.83
577 578 9.294030 GTGAATTATTTGGACTCATCATTTGTC 57.706 33.333 0.00 0.00 0.00 3.18
578 579 9.246670 TGAATTATTTGGACTCATCATTTGTCT 57.753 29.630 0.00 0.00 0.00 3.41
579 580 9.727627 GAATTATTTGGACTCATCATTTGTCTC 57.272 33.333 0.00 0.00 0.00 3.36
580 581 9.471702 AATTATTTGGACTCATCATTTGTCTCT 57.528 29.630 0.00 0.00 0.00 3.10
581 582 8.868522 TTATTTGGACTCATCATTTGTCTCTT 57.131 30.769 0.00 0.00 0.00 2.85
582 583 7.771927 ATTTGGACTCATCATTTGTCTCTTT 57.228 32.000 0.00 0.00 0.00 2.52
583 584 7.587037 TTTGGACTCATCATTTGTCTCTTTT 57.413 32.000 0.00 0.00 0.00 2.27
584 585 6.564709 TGGACTCATCATTTGTCTCTTTTG 57.435 37.500 0.00 0.00 0.00 2.44
585 586 5.048504 TGGACTCATCATTTGTCTCTTTTGC 60.049 40.000 0.00 0.00 0.00 3.68
586 587 5.182760 GGACTCATCATTTGTCTCTTTTGCT 59.817 40.000 0.00 0.00 0.00 3.91
587 588 6.010294 ACTCATCATTTGTCTCTTTTGCTG 57.990 37.500 0.00 0.00 0.00 4.41
588 589 5.048224 ACTCATCATTTGTCTCTTTTGCTGG 60.048 40.000 0.00 0.00 0.00 4.85
589 590 3.648339 TCATTTGTCTCTTTTGCTGGC 57.352 42.857 0.00 0.00 0.00 4.85
590 591 2.957680 TCATTTGTCTCTTTTGCTGGCA 59.042 40.909 0.00 0.00 0.00 4.92
591 592 3.384146 TCATTTGTCTCTTTTGCTGGCAA 59.616 39.130 3.72 3.72 0.00 4.52
592 593 3.441496 TTTGTCTCTTTTGCTGGCAAG 57.559 42.857 8.04 0.00 37.24 4.01
593 594 2.057137 TGTCTCTTTTGCTGGCAAGT 57.943 45.000 8.04 0.00 37.24 3.16
594 595 3.207265 TGTCTCTTTTGCTGGCAAGTA 57.793 42.857 8.04 1.03 37.24 2.24
595 596 3.754965 TGTCTCTTTTGCTGGCAAGTAT 58.245 40.909 8.04 0.00 37.24 2.12
596 597 4.144297 TGTCTCTTTTGCTGGCAAGTATT 58.856 39.130 8.04 0.00 37.24 1.89
597 598 4.216257 TGTCTCTTTTGCTGGCAAGTATTC 59.784 41.667 8.04 1.31 37.24 1.75
598 599 3.758554 TCTCTTTTGCTGGCAAGTATTCC 59.241 43.478 8.04 0.00 37.24 3.01
599 600 3.495331 TCTTTTGCTGGCAAGTATTCCA 58.505 40.909 8.04 0.00 37.24 3.53
607 608 4.846779 TGGCAAGTATTCCAGACAAAAC 57.153 40.909 0.00 0.00 0.00 2.43
608 609 4.211125 TGGCAAGTATTCCAGACAAAACA 58.789 39.130 0.00 0.00 0.00 2.83
609 610 4.646945 TGGCAAGTATTCCAGACAAAACAA 59.353 37.500 0.00 0.00 0.00 2.83
610 611 5.127845 TGGCAAGTATTCCAGACAAAACAAA 59.872 36.000 0.00 0.00 0.00 2.83
611 612 6.045955 GGCAAGTATTCCAGACAAAACAAAA 58.954 36.000 0.00 0.00 0.00 2.44
612 613 6.019075 GGCAAGTATTCCAGACAAAACAAAAC 60.019 38.462 0.00 0.00 0.00 2.43
613 614 6.533367 GCAAGTATTCCAGACAAAACAAAACA 59.467 34.615 0.00 0.00 0.00 2.83
614 615 7.064016 GCAAGTATTCCAGACAAAACAAAACAA 59.936 33.333 0.00 0.00 0.00 2.83
615 616 9.097257 CAAGTATTCCAGACAAAACAAAACAAT 57.903 29.630 0.00 0.00 0.00 2.71
616 617 9.665719 AAGTATTCCAGACAAAACAAAACAATT 57.334 25.926 0.00 0.00 0.00 2.32
620 621 9.612066 ATTCCAGACAAAACAAAACAATTATGT 57.388 25.926 0.00 0.00 43.14 2.29
728 730 0.310854 GGGTTCGGTGCTGTTCTTTG 59.689 55.000 0.00 0.00 0.00 2.77
822 830 1.885049 AGGGATGGTATGAGCTGTGT 58.115 50.000 0.00 0.00 0.00 3.72
932 940 2.752238 CACGCCTCCTCGACTCCT 60.752 66.667 0.00 0.00 0.00 3.69
937 945 1.939769 GCCTCCTCGACTCCTCACAC 61.940 65.000 0.00 0.00 0.00 3.82
1072 1080 1.910276 GCTGGCCTGGCTTTCCTTT 60.910 57.895 19.68 0.00 0.00 3.11
2091 2616 2.248248 CTCAAGTCCCTCCACTACACA 58.752 52.381 0.00 0.00 0.00 3.72
2642 3183 0.875059 GTGGCGACAAAAGAAGAGGG 59.125 55.000 0.00 0.00 46.06 4.30
2688 3229 4.800471 CAGAAAAGAAGAAACAACTGGTGC 59.200 41.667 0.00 0.00 0.00 5.01
2694 3237 4.576463 AGAAGAAACAACTGGTGCTTACTG 59.424 41.667 0.00 0.00 0.00 2.74
2714 3257 2.560542 TGCACGGCAAATAAAACATCCT 59.439 40.909 0.00 0.00 34.76 3.24
2729 3272 6.933514 AAACATCCTCCATTAAAACATGGT 57.066 33.333 0.00 0.00 43.94 3.55
2738 3281 7.130681 TCCATTAAAACATGGTTTGAGGTTT 57.869 32.000 19.09 0.00 43.94 3.27
2742 3285 5.606348 AAAACATGGTTTGAGGTTTAGCA 57.394 34.783 8.22 0.00 33.46 3.49
2779 3322 6.598850 TCATAGTTTAGATGCAAACATGAGCA 59.401 34.615 12.92 12.92 45.92 4.26
2781 3324 4.157289 AGTTTAGATGCAAACATGAGCAGG 59.843 41.667 15.06 0.00 44.94 4.85
3085 3647 3.279116 TCGTTGTCGTCGTCCGGT 61.279 61.111 0.00 0.00 38.33 5.28
3140 3702 2.279252 GACCGGCGTCGCATATGT 60.279 61.111 20.50 9.60 34.56 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.814842 TGCTTTGACAGTTGTACATCTGG 59.185 43.478 28.82 16.48 36.17 3.86
2 3 5.027206 CTGCTTTGACAGTTGTACATCTG 57.973 43.478 25.59 25.59 37.65 2.90
32 33 6.549364 AGTGAAGACAATCATTTGGTAAACCA 59.451 34.615 0.00 0.00 45.94 3.67
33 34 6.981722 AGTGAAGACAATCATTTGGTAAACC 58.018 36.000 0.00 0.00 37.15 3.27
34 35 9.612620 CTTAGTGAAGACAATCATTTGGTAAAC 57.387 33.333 0.00 0.00 37.15 2.01
35 36 8.296713 GCTTAGTGAAGACAATCATTTGGTAAA 58.703 33.333 0.00 0.00 34.25 2.01
36 37 7.665559 AGCTTAGTGAAGACAATCATTTGGTAA 59.334 33.333 0.00 0.00 34.25 2.85
37 38 7.168219 AGCTTAGTGAAGACAATCATTTGGTA 58.832 34.615 0.00 0.00 34.25 3.25
38 39 6.006449 AGCTTAGTGAAGACAATCATTTGGT 58.994 36.000 0.00 0.00 34.25 3.67
39 40 6.506500 AGCTTAGTGAAGACAATCATTTGG 57.493 37.500 0.00 0.00 34.25 3.28
40 41 8.725148 AGTAAGCTTAGTGAAGACAATCATTTG 58.275 33.333 13.11 0.00 34.25 2.32
41 42 8.725148 CAGTAAGCTTAGTGAAGACAATCATTT 58.275 33.333 29.79 0.00 36.42 2.32
42 43 7.335422 CCAGTAAGCTTAGTGAAGACAATCATT 59.665 37.037 33.45 0.00 36.42 2.57
43 44 6.820656 CCAGTAAGCTTAGTGAAGACAATCAT 59.179 38.462 33.45 0.00 36.42 2.45
44 45 6.166279 CCAGTAAGCTTAGTGAAGACAATCA 58.834 40.000 33.45 0.00 36.42 2.57
45 46 6.166982 ACCAGTAAGCTTAGTGAAGACAATC 58.833 40.000 33.45 8.25 36.42 2.67
46 47 6.115448 ACCAGTAAGCTTAGTGAAGACAAT 57.885 37.500 33.45 13.01 36.42 2.71
47 48 5.546621 ACCAGTAAGCTTAGTGAAGACAA 57.453 39.130 33.45 0.00 36.42 3.18
48 49 5.304614 AGAACCAGTAAGCTTAGTGAAGACA 59.695 40.000 33.45 0.00 36.42 3.41
49 50 5.785243 AGAACCAGTAAGCTTAGTGAAGAC 58.215 41.667 33.45 22.54 36.42 3.01
50 51 7.719871 ATAGAACCAGTAAGCTTAGTGAAGA 57.280 36.000 33.45 18.24 36.42 2.87
51 52 8.779354 AAATAGAACCAGTAAGCTTAGTGAAG 57.221 34.615 33.45 22.97 36.42 3.02
52 53 7.822822 GGAAATAGAACCAGTAAGCTTAGTGAA 59.177 37.037 33.45 17.79 36.42 3.18
53 54 7.328737 GGAAATAGAACCAGTAAGCTTAGTGA 58.671 38.462 33.45 18.80 36.42 3.41
54 55 6.539103 GGGAAATAGAACCAGTAAGCTTAGTG 59.461 42.308 27.64 27.64 34.58 2.74
55 56 6.352823 GGGGAAATAGAACCAGTAAGCTTAGT 60.353 42.308 6.38 7.29 0.00 2.24
56 57 6.056236 GGGGAAATAGAACCAGTAAGCTTAG 58.944 44.000 6.38 0.00 0.00 2.18
57 58 5.489637 TGGGGAAATAGAACCAGTAAGCTTA 59.510 40.000 0.86 0.86 0.00 3.09
58 59 4.291249 TGGGGAAATAGAACCAGTAAGCTT 59.709 41.667 3.48 3.48 0.00 3.74
59 60 3.850173 TGGGGAAATAGAACCAGTAAGCT 59.150 43.478 0.00 0.00 0.00 3.74
60 61 3.945921 GTGGGGAAATAGAACCAGTAAGC 59.054 47.826 0.00 0.00 32.84 3.09
61 62 4.524053 GGTGGGGAAATAGAACCAGTAAG 58.476 47.826 0.00 0.00 32.84 2.34
62 63 3.267551 GGGTGGGGAAATAGAACCAGTAA 59.732 47.826 0.00 0.00 32.84 2.24
63 64 2.848071 GGGTGGGGAAATAGAACCAGTA 59.152 50.000 0.00 0.00 32.84 2.74
64 65 1.639108 GGGTGGGGAAATAGAACCAGT 59.361 52.381 0.00 0.00 32.84 4.00
65 66 1.063942 GGGGTGGGGAAATAGAACCAG 60.064 57.143 0.00 0.00 32.84 4.00
66 67 1.004436 GGGGTGGGGAAATAGAACCA 58.996 55.000 0.00 0.00 32.28 3.67
67 68 0.260816 GGGGGTGGGGAAATAGAACC 59.739 60.000 0.00 0.00 0.00 3.62
68 69 1.305886 AGGGGGTGGGGAAATAGAAC 58.694 55.000 0.00 0.00 0.00 3.01
69 70 1.927371 GAAGGGGGTGGGGAAATAGAA 59.073 52.381 0.00 0.00 0.00 2.10
70 71 1.203635 TGAAGGGGGTGGGGAAATAGA 60.204 52.381 0.00 0.00 0.00 1.98
71 72 1.304891 TGAAGGGGGTGGGGAAATAG 58.695 55.000 0.00 0.00 0.00 1.73
72 73 2.009186 ATGAAGGGGGTGGGGAAATA 57.991 50.000 0.00 0.00 0.00 1.40
73 74 1.101195 AATGAAGGGGGTGGGGAAAT 58.899 50.000 0.00 0.00 0.00 2.17
74 75 0.871024 AAATGAAGGGGGTGGGGAAA 59.129 50.000 0.00 0.00 0.00 3.13
75 76 0.411848 GAAATGAAGGGGGTGGGGAA 59.588 55.000 0.00 0.00 0.00 3.97
76 77 1.514864 GGAAATGAAGGGGGTGGGGA 61.515 60.000 0.00 0.00 0.00 4.81
77 78 1.001631 GGAAATGAAGGGGGTGGGG 59.998 63.158 0.00 0.00 0.00 4.96
78 79 0.033109 GAGGAAATGAAGGGGGTGGG 60.033 60.000 0.00 0.00 0.00 4.61
79 80 0.704076 TGAGGAAATGAAGGGGGTGG 59.296 55.000 0.00 0.00 0.00 4.61
80 81 2.834638 ATGAGGAAATGAAGGGGGTG 57.165 50.000 0.00 0.00 0.00 4.61
81 82 3.858638 AGTAATGAGGAAATGAAGGGGGT 59.141 43.478 0.00 0.00 0.00 4.95
82 83 4.210331 CAGTAATGAGGAAATGAAGGGGG 58.790 47.826 0.00 0.00 0.00 5.40
83 84 4.641989 CACAGTAATGAGGAAATGAAGGGG 59.358 45.833 0.00 0.00 0.00 4.79
84 85 5.256474 ACACAGTAATGAGGAAATGAAGGG 58.744 41.667 0.00 0.00 0.00 3.95
85 86 6.207417 ACAACACAGTAATGAGGAAATGAAGG 59.793 38.462 0.00 0.00 0.00 3.46
86 87 7.080099 CACAACACAGTAATGAGGAAATGAAG 58.920 38.462 0.00 0.00 0.00 3.02
87 88 6.545666 ACACAACACAGTAATGAGGAAATGAA 59.454 34.615 0.00 0.00 0.00 2.57
88 89 6.017192 CACACAACACAGTAATGAGGAAATGA 60.017 38.462 0.00 0.00 0.00 2.57
89 90 6.144854 CACACAACACAGTAATGAGGAAATG 58.855 40.000 0.00 0.00 0.00 2.32
90 91 5.278463 GCACACAACACAGTAATGAGGAAAT 60.278 40.000 0.00 0.00 0.00 2.17
91 92 4.036262 GCACACAACACAGTAATGAGGAAA 59.964 41.667 0.00 0.00 0.00 3.13
92 93 3.563808 GCACACAACACAGTAATGAGGAA 59.436 43.478 0.00 0.00 0.00 3.36
93 94 3.138304 GCACACAACACAGTAATGAGGA 58.862 45.455 0.00 0.00 0.00 3.71
94 95 3.141398 AGCACACAACACAGTAATGAGG 58.859 45.455 0.00 0.00 0.00 3.86
95 96 4.035558 ACAAGCACACAACACAGTAATGAG 59.964 41.667 0.00 0.00 0.00 2.90
96 97 3.944650 ACAAGCACACAACACAGTAATGA 59.055 39.130 0.00 0.00 0.00 2.57
97 98 4.291540 ACAAGCACACAACACAGTAATG 57.708 40.909 0.00 0.00 0.00 1.90
98 99 4.495679 CGAACAAGCACACAACACAGTAAT 60.496 41.667 0.00 0.00 0.00 1.89
99 100 3.181515 CGAACAAGCACACAACACAGTAA 60.182 43.478 0.00 0.00 0.00 2.24
100 101 2.350192 CGAACAAGCACACAACACAGTA 59.650 45.455 0.00 0.00 0.00 2.74
101 102 1.130373 CGAACAAGCACACAACACAGT 59.870 47.619 0.00 0.00 0.00 3.55
102 103 1.130373 ACGAACAAGCACACAACACAG 59.870 47.619 0.00 0.00 0.00 3.66
103 104 1.160989 ACGAACAAGCACACAACACA 58.839 45.000 0.00 0.00 0.00 3.72
104 105 3.247648 AGATACGAACAAGCACACAACAC 59.752 43.478 0.00 0.00 0.00 3.32
105 106 3.247411 CAGATACGAACAAGCACACAACA 59.753 43.478 0.00 0.00 0.00 3.33
106 107 3.247648 ACAGATACGAACAAGCACACAAC 59.752 43.478 0.00 0.00 0.00 3.32
107 108 3.462982 ACAGATACGAACAAGCACACAA 58.537 40.909 0.00 0.00 0.00 3.33
108 109 3.106242 ACAGATACGAACAAGCACACA 57.894 42.857 0.00 0.00 0.00 3.72
109 110 4.025229 TCAAACAGATACGAACAAGCACAC 60.025 41.667 0.00 0.00 0.00 3.82
110 111 4.123506 TCAAACAGATACGAACAAGCACA 58.876 39.130 0.00 0.00 0.00 4.57
111 112 4.725556 TCAAACAGATACGAACAAGCAC 57.274 40.909 0.00 0.00 0.00 4.40
112 113 4.213270 CCTTCAAACAGATACGAACAAGCA 59.787 41.667 0.00 0.00 0.00 3.91
113 114 4.712763 CCTTCAAACAGATACGAACAAGC 58.287 43.478 0.00 0.00 0.00 4.01
114 115 4.452455 AGCCTTCAAACAGATACGAACAAG 59.548 41.667 0.00 0.00 0.00 3.16
115 116 4.385825 AGCCTTCAAACAGATACGAACAA 58.614 39.130 0.00 0.00 0.00 2.83
116 117 4.002906 AGCCTTCAAACAGATACGAACA 57.997 40.909 0.00 0.00 0.00 3.18
117 118 5.049680 TCAAAGCCTTCAAACAGATACGAAC 60.050 40.000 0.00 0.00 0.00 3.95
118 119 5.049680 GTCAAAGCCTTCAAACAGATACGAA 60.050 40.000 0.00 0.00 0.00 3.85
119 120 4.451096 GTCAAAGCCTTCAAACAGATACGA 59.549 41.667 0.00 0.00 0.00 3.43
120 121 4.452455 AGTCAAAGCCTTCAAACAGATACG 59.548 41.667 0.00 0.00 0.00 3.06
121 122 5.470098 TCAGTCAAAGCCTTCAAACAGATAC 59.530 40.000 0.00 0.00 0.00 2.24
122 123 5.620206 TCAGTCAAAGCCTTCAAACAGATA 58.380 37.500 0.00 0.00 0.00 1.98
123 124 4.464008 TCAGTCAAAGCCTTCAAACAGAT 58.536 39.130 0.00 0.00 0.00 2.90
124 125 3.884895 TCAGTCAAAGCCTTCAAACAGA 58.115 40.909 0.00 0.00 0.00 3.41
125 126 4.336433 TCTTCAGTCAAAGCCTTCAAACAG 59.664 41.667 0.00 0.00 0.00 3.16
126 127 4.096382 GTCTTCAGTCAAAGCCTTCAAACA 59.904 41.667 0.00 0.00 0.00 2.83
127 128 4.336713 AGTCTTCAGTCAAAGCCTTCAAAC 59.663 41.667 0.00 0.00 0.00 2.93
128 129 4.526970 AGTCTTCAGTCAAAGCCTTCAAA 58.473 39.130 0.00 0.00 0.00 2.69
129 130 4.156455 AGTCTTCAGTCAAAGCCTTCAA 57.844 40.909 0.00 0.00 0.00 2.69
130 131 3.845781 AGTCTTCAGTCAAAGCCTTCA 57.154 42.857 0.00 0.00 0.00 3.02
131 132 4.819088 AGAAAGTCTTCAGTCAAAGCCTTC 59.181 41.667 0.00 0.00 33.64 3.46
132 133 4.786425 AGAAAGTCTTCAGTCAAAGCCTT 58.214 39.130 0.00 0.00 33.64 4.35
133 134 4.429854 AGAAAGTCTTCAGTCAAAGCCT 57.570 40.909 0.00 0.00 33.64 4.58
134 135 6.619801 TTAAGAAAGTCTTCAGTCAAAGCC 57.380 37.500 0.00 0.00 37.89 4.35
135 136 9.521503 AAAATTAAGAAAGTCTTCAGTCAAAGC 57.478 29.630 0.00 0.00 37.89 3.51
171 172 9.750125 GGATGAAGACAAACAAACTTAAGAAAT 57.250 29.630 10.09 0.00 0.00 2.17
172 173 8.966868 AGGATGAAGACAAACAAACTTAAGAAA 58.033 29.630 10.09 0.00 0.00 2.52
173 174 8.519799 AGGATGAAGACAAACAAACTTAAGAA 57.480 30.769 10.09 0.00 0.00 2.52
174 175 8.519799 AAGGATGAAGACAAACAAACTTAAGA 57.480 30.769 10.09 0.00 0.00 2.10
175 176 9.586435 AAAAGGATGAAGACAAACAAACTTAAG 57.414 29.630 0.00 0.00 0.00 1.85
176 177 9.936759 AAAAAGGATGAAGACAAACAAACTTAA 57.063 25.926 0.00 0.00 0.00 1.85
210 211 6.645415 ACACATAGTACAGAAAGTGTAAGCAC 59.355 38.462 0.00 0.00 43.49 4.40
211 212 6.755206 ACACATAGTACAGAAAGTGTAAGCA 58.245 36.000 0.00 0.00 43.49 3.91
212 213 7.091443 AGACACATAGTACAGAAAGTGTAAGC 58.909 38.462 8.77 0.00 43.49 3.09
213 214 8.916654 CAAGACACATAGTACAGAAAGTGTAAG 58.083 37.037 8.77 1.58 43.49 2.34
214 215 8.418662 ACAAGACACATAGTACAGAAAGTGTAA 58.581 33.333 8.77 0.00 43.49 2.41
215 216 7.948357 ACAAGACACATAGTACAGAAAGTGTA 58.052 34.615 8.77 0.00 39.98 2.90
216 217 6.817184 ACAAGACACATAGTACAGAAAGTGT 58.183 36.000 8.61 8.61 42.29 3.55
217 218 7.715265 AACAAGACACATAGTACAGAAAGTG 57.285 36.000 0.00 0.00 0.00 3.16
218 219 8.732746 AAAACAAGACACATAGTACAGAAAGT 57.267 30.769 0.00 0.00 0.00 2.66
235 236 9.859427 GGACATCATGATGAATTAAAAACAAGA 57.141 29.630 36.37 0.00 41.20 3.02
236 237 9.642327 TGGACATCATGATGAATTAAAAACAAG 57.358 29.630 36.37 10.06 41.20 3.16
253 254 5.382616 ACATGACATAAGCATGGACATCAT 58.617 37.500 0.00 0.00 45.62 2.45
254 255 4.784177 ACATGACATAAGCATGGACATCA 58.216 39.130 0.00 0.00 45.62 3.07
255 256 4.818005 TGACATGACATAAGCATGGACATC 59.182 41.667 0.00 0.00 45.62 3.06
256 257 4.784177 TGACATGACATAAGCATGGACAT 58.216 39.130 0.00 0.00 45.62 3.06
257 258 4.219264 TGACATGACATAAGCATGGACA 57.781 40.909 0.00 0.00 45.62 4.02
258 259 4.577693 ACATGACATGACATAAGCATGGAC 59.422 41.667 22.19 0.00 45.62 4.02
259 260 4.784177 ACATGACATGACATAAGCATGGA 58.216 39.130 22.19 0.00 45.62 3.41
260 261 4.820173 AGACATGACATGACATAAGCATGG 59.180 41.667 22.19 0.00 45.62 3.66
261 262 5.748592 CAGACATGACATGACATAAGCATG 58.251 41.667 22.19 16.56 46.49 4.06
262 263 4.275196 GCAGACATGACATGACATAAGCAT 59.725 41.667 22.19 0.00 0.00 3.79
263 264 3.624410 GCAGACATGACATGACATAAGCA 59.376 43.478 22.19 0.00 0.00 3.91
264 265 3.624410 TGCAGACATGACATGACATAAGC 59.376 43.478 22.19 16.67 0.00 3.09
265 266 5.758784 AGATGCAGACATGACATGACATAAG 59.241 40.000 22.19 8.44 36.35 1.73
266 267 5.526111 CAGATGCAGACATGACATGACATAA 59.474 40.000 22.19 5.78 36.35 1.90
267 268 5.054477 CAGATGCAGACATGACATGACATA 58.946 41.667 22.19 6.80 36.35 2.29
268 269 3.877508 CAGATGCAGACATGACATGACAT 59.122 43.478 22.19 17.07 36.35 3.06
269 270 3.055675 TCAGATGCAGACATGACATGACA 60.056 43.478 22.19 13.51 36.35 3.58
270 271 3.528532 TCAGATGCAGACATGACATGAC 58.471 45.455 22.19 15.62 36.35 3.06
271 272 3.197116 ACTCAGATGCAGACATGACATGA 59.803 43.478 22.19 0.00 36.35 3.07
272 273 3.532542 ACTCAGATGCAGACATGACATG 58.467 45.455 14.02 14.02 36.35 3.21
273 274 3.908643 ACTCAGATGCAGACATGACAT 57.091 42.857 0.00 0.00 36.35 3.06
274 275 3.766051 AGTACTCAGATGCAGACATGACA 59.234 43.478 0.00 0.00 36.35 3.58
275 276 4.383850 AGTACTCAGATGCAGACATGAC 57.616 45.455 0.00 0.00 36.35 3.06
276 277 6.721704 ATAAGTACTCAGATGCAGACATGA 57.278 37.500 0.00 0.00 36.35 3.07
277 278 6.423302 GGAATAAGTACTCAGATGCAGACATG 59.577 42.308 0.00 0.00 36.35 3.21
278 279 6.520272 GGAATAAGTACTCAGATGCAGACAT 58.480 40.000 0.00 0.00 39.98 3.06
279 280 5.450550 CGGAATAAGTACTCAGATGCAGACA 60.451 44.000 0.00 0.00 0.00 3.41
280 281 4.979197 CGGAATAAGTACTCAGATGCAGAC 59.021 45.833 0.00 0.00 0.00 3.51
281 282 4.499865 GCGGAATAAGTACTCAGATGCAGA 60.500 45.833 0.00 0.00 0.00 4.26
282 283 3.738282 GCGGAATAAGTACTCAGATGCAG 59.262 47.826 0.00 0.00 0.00 4.41
283 284 3.384789 AGCGGAATAAGTACTCAGATGCA 59.615 43.478 0.00 0.00 0.00 3.96
284 285 3.738282 CAGCGGAATAAGTACTCAGATGC 59.262 47.826 0.00 0.00 0.00 3.91
285 286 3.738282 GCAGCGGAATAAGTACTCAGATG 59.262 47.826 0.00 0.00 0.00 2.90
286 287 3.384789 TGCAGCGGAATAAGTACTCAGAT 59.615 43.478 0.00 0.00 0.00 2.90
287 288 2.758423 TGCAGCGGAATAAGTACTCAGA 59.242 45.455 0.00 0.00 0.00 3.27
288 289 3.165058 TGCAGCGGAATAAGTACTCAG 57.835 47.619 0.00 0.00 0.00 3.35
289 290 3.056107 ACTTGCAGCGGAATAAGTACTCA 60.056 43.478 0.00 0.00 32.05 3.41
290 291 3.522553 ACTTGCAGCGGAATAAGTACTC 58.477 45.455 0.00 0.00 32.05 2.59
291 292 3.611766 ACTTGCAGCGGAATAAGTACT 57.388 42.857 0.00 0.00 32.05 2.73
292 293 4.430908 ACTACTTGCAGCGGAATAAGTAC 58.569 43.478 0.00 0.00 35.26 2.73
293 294 4.730949 ACTACTTGCAGCGGAATAAGTA 57.269 40.909 3.08 3.08 35.26 2.24
294 295 3.611766 ACTACTTGCAGCGGAATAAGT 57.388 42.857 1.12 1.12 37.21 2.24
295 296 4.184629 AGAACTACTTGCAGCGGAATAAG 58.815 43.478 0.00 0.00 0.00 1.73
296 297 4.202245 AGAACTACTTGCAGCGGAATAA 57.798 40.909 0.00 0.00 0.00 1.40
297 298 3.887621 AGAACTACTTGCAGCGGAATA 57.112 42.857 0.00 0.00 0.00 1.75
298 299 2.770164 AGAACTACTTGCAGCGGAAT 57.230 45.000 0.00 0.00 0.00 3.01
299 300 2.413837 GAAGAACTACTTGCAGCGGAA 58.586 47.619 0.00 0.00 39.13 4.30
300 301 1.668919 CGAAGAACTACTTGCAGCGGA 60.669 52.381 0.00 0.00 39.13 5.54
301 302 0.716108 CGAAGAACTACTTGCAGCGG 59.284 55.000 0.00 0.00 39.13 5.52
302 303 0.093705 GCGAAGAACTACTTGCAGCG 59.906 55.000 0.00 0.00 39.13 5.18
303 304 1.391826 GAGCGAAGAACTACTTGCAGC 59.608 52.381 0.00 0.00 39.13 5.25
304 305 2.665537 CTGAGCGAAGAACTACTTGCAG 59.334 50.000 0.00 0.00 39.13 4.41
305 306 2.610479 CCTGAGCGAAGAACTACTTGCA 60.610 50.000 0.00 0.00 39.13 4.08
306 307 1.996191 CCTGAGCGAAGAACTACTTGC 59.004 52.381 0.00 0.00 39.13 4.01
307 308 3.577649 TCCTGAGCGAAGAACTACTTG 57.422 47.619 0.00 0.00 39.13 3.16
308 309 4.810191 ATTCCTGAGCGAAGAACTACTT 57.190 40.909 0.00 0.00 42.03 2.24
309 310 4.810191 AATTCCTGAGCGAAGAACTACT 57.190 40.909 0.00 0.00 0.00 2.57
310 311 4.330347 GGAAATTCCTGAGCGAAGAACTAC 59.670 45.833 4.46 0.00 32.53 2.73
311 312 4.504858 GGAAATTCCTGAGCGAAGAACTA 58.495 43.478 4.46 0.00 32.53 2.24
312 313 3.339141 GGAAATTCCTGAGCGAAGAACT 58.661 45.455 4.46 0.00 32.53 3.01
313 314 3.748868 GGAAATTCCTGAGCGAAGAAC 57.251 47.619 4.46 0.00 32.53 3.01
328 329 4.044571 TGAGGAATTTCAGGGTGAGGAAAT 59.955 41.667 0.00 0.00 43.54 2.17
329 330 3.397618 TGAGGAATTTCAGGGTGAGGAAA 59.602 43.478 0.00 0.00 37.41 3.13
330 331 2.986019 TGAGGAATTTCAGGGTGAGGAA 59.014 45.455 0.00 0.00 0.00 3.36
331 332 2.573462 CTGAGGAATTTCAGGGTGAGGA 59.427 50.000 0.00 0.00 40.69 3.71
332 333 2.996631 CTGAGGAATTTCAGGGTGAGG 58.003 52.381 0.00 0.00 40.69 3.86
359 360 9.074576 GGGGGTGAATAGACGATTTTTATAAAT 57.925 33.333 0.00 0.00 36.68 1.40
360 361 8.454570 GGGGGTGAATAGACGATTTTTATAAA 57.545 34.615 0.00 0.00 0.00 1.40
382 383 1.674962 CGTTAAGTCGACTAGAGGGGG 59.325 57.143 20.39 1.07 0.00 5.40
383 384 1.065251 GCGTTAAGTCGACTAGAGGGG 59.935 57.143 20.39 7.63 0.00 4.79
384 385 1.741706 TGCGTTAAGTCGACTAGAGGG 59.258 52.381 20.39 8.71 0.00 4.30
385 386 2.419324 AGTGCGTTAAGTCGACTAGAGG 59.581 50.000 20.39 16.03 0.00 3.69
386 387 3.743567 AGTGCGTTAAGTCGACTAGAG 57.256 47.619 20.39 11.75 0.00 2.43
387 388 4.023792 TGAAAGTGCGTTAAGTCGACTAGA 60.024 41.667 20.39 7.29 0.00 2.43
388 389 4.224433 TGAAAGTGCGTTAAGTCGACTAG 58.776 43.478 20.39 11.75 0.00 2.57
389 390 4.224433 CTGAAAGTGCGTTAAGTCGACTA 58.776 43.478 20.39 0.04 0.00 2.59
390 391 3.050619 CTGAAAGTGCGTTAAGTCGACT 58.949 45.455 13.58 13.58 0.00 4.18
391 392 2.155155 CCTGAAAGTGCGTTAAGTCGAC 59.845 50.000 7.70 7.70 0.00 4.20
392 393 2.034939 TCCTGAAAGTGCGTTAAGTCGA 59.965 45.455 0.00 0.00 0.00 4.20
393 394 2.400399 TCCTGAAAGTGCGTTAAGTCG 58.600 47.619 0.00 0.00 0.00 4.18
394 395 3.808174 ACTTCCTGAAAGTGCGTTAAGTC 59.192 43.478 0.00 0.00 46.61 3.01
395 396 3.805207 ACTTCCTGAAAGTGCGTTAAGT 58.195 40.909 0.00 0.00 46.61 2.24
405 406 9.118236 GTTTCATTTTTCGATACTTCCTGAAAG 57.882 33.333 0.00 0.00 41.08 2.62
406 407 7.801315 CGTTTCATTTTTCGATACTTCCTGAAA 59.199 33.333 0.00 0.00 0.00 2.69
407 408 7.041644 ACGTTTCATTTTTCGATACTTCCTGAA 60.042 33.333 0.00 0.00 0.00 3.02
408 409 6.425721 ACGTTTCATTTTTCGATACTTCCTGA 59.574 34.615 0.00 0.00 0.00 3.86
409 410 6.519761 CACGTTTCATTTTTCGATACTTCCTG 59.480 38.462 0.00 0.00 0.00 3.86
410 411 6.204108 ACACGTTTCATTTTTCGATACTTCCT 59.796 34.615 0.00 0.00 0.00 3.36
411 412 6.302313 CACACGTTTCATTTTTCGATACTTCC 59.698 38.462 0.00 0.00 0.00 3.46
412 413 7.067116 TCACACGTTTCATTTTTCGATACTTC 58.933 34.615 0.00 0.00 0.00 3.01
413 414 6.950545 TCACACGTTTCATTTTTCGATACTT 58.049 32.000 0.00 0.00 0.00 2.24
414 415 6.533819 TCACACGTTTCATTTTTCGATACT 57.466 33.333 0.00 0.00 0.00 2.12
415 416 7.775729 AATCACACGTTTCATTTTTCGATAC 57.224 32.000 0.00 0.00 0.00 2.24
417 418 8.964420 ATTAATCACACGTTTCATTTTTCGAT 57.036 26.923 0.00 0.00 0.00 3.59
418 419 8.686418 CAATTAATCACACGTTTCATTTTTCGA 58.314 29.630 0.00 0.00 0.00 3.71
419 420 8.476142 ACAATTAATCACACGTTTCATTTTTCG 58.524 29.630 0.00 0.00 0.00 3.46
423 424 9.352784 CCATACAATTAATCACACGTTTCATTT 57.647 29.630 0.00 0.00 0.00 2.32
424 425 7.973388 CCCATACAATTAATCACACGTTTCATT 59.027 33.333 0.00 0.00 0.00 2.57
425 426 7.338196 TCCCATACAATTAATCACACGTTTCAT 59.662 33.333 0.00 0.00 0.00 2.57
426 427 6.655425 TCCCATACAATTAATCACACGTTTCA 59.345 34.615 0.00 0.00 0.00 2.69
427 428 7.079182 TCCCATACAATTAATCACACGTTTC 57.921 36.000 0.00 0.00 0.00 2.78
428 429 6.094881 CCTCCCATACAATTAATCACACGTTT 59.905 38.462 0.00 0.00 0.00 3.60
429 430 5.588648 CCTCCCATACAATTAATCACACGTT 59.411 40.000 0.00 0.00 0.00 3.99
430 431 5.104693 TCCTCCCATACAATTAATCACACGT 60.105 40.000 0.00 0.00 0.00 4.49
431 432 5.364778 TCCTCCCATACAATTAATCACACG 58.635 41.667 0.00 0.00 0.00 4.49
432 433 7.651808 CATTCCTCCCATACAATTAATCACAC 58.348 38.462 0.00 0.00 0.00 3.82
433 434 6.265196 GCATTCCTCCCATACAATTAATCACA 59.735 38.462 0.00 0.00 0.00 3.58
434 435 6.294731 GGCATTCCTCCCATACAATTAATCAC 60.295 42.308 0.00 0.00 0.00 3.06
435 436 5.774690 GGCATTCCTCCCATACAATTAATCA 59.225 40.000 0.00 0.00 0.00 2.57
436 437 5.774690 TGGCATTCCTCCCATACAATTAATC 59.225 40.000 0.00 0.00 0.00 1.75
437 438 5.539955 GTGGCATTCCTCCCATACAATTAAT 59.460 40.000 0.00 0.00 32.95 1.40
438 439 4.892934 GTGGCATTCCTCCCATACAATTAA 59.107 41.667 0.00 0.00 32.95 1.40
439 440 4.469657 GTGGCATTCCTCCCATACAATTA 58.530 43.478 0.00 0.00 32.95 1.40
440 441 3.299503 GTGGCATTCCTCCCATACAATT 58.700 45.455 0.00 0.00 32.95 2.32
441 442 2.424812 GGTGGCATTCCTCCCATACAAT 60.425 50.000 0.00 0.00 39.55 2.71
442 443 1.064017 GGTGGCATTCCTCCCATACAA 60.064 52.381 0.00 0.00 39.55 2.41
443 444 0.550914 GGTGGCATTCCTCCCATACA 59.449 55.000 0.00 0.00 39.55 2.29
444 445 0.535102 CGGTGGCATTCCTCCCATAC 60.535 60.000 0.00 0.00 41.84 2.39
445 446 0.692756 TCGGTGGCATTCCTCCCATA 60.693 55.000 0.00 0.00 41.84 2.74
446 447 2.000701 TCGGTGGCATTCCTCCCAT 61.001 57.895 0.00 0.00 41.84 4.00
447 448 2.609299 TCGGTGGCATTCCTCCCA 60.609 61.111 0.00 0.00 41.84 4.37
448 449 2.124695 GTCGGTGGCATTCCTCCC 60.125 66.667 0.00 0.00 41.84 4.30
449 450 2.511600 CGTCGGTGGCATTCCTCC 60.512 66.667 0.00 0.00 41.52 4.30
450 451 1.519455 CTCGTCGGTGGCATTCCTC 60.519 63.158 0.00 0.00 0.00 3.71
451 452 2.579201 CTCGTCGGTGGCATTCCT 59.421 61.111 0.00 0.00 0.00 3.36
452 453 2.511600 CCTCGTCGGTGGCATTCC 60.512 66.667 0.00 0.00 0.00 3.01
453 454 2.264794 ACCTCGTCGGTGGCATTC 59.735 61.111 0.00 0.00 46.80 2.67
461 462 2.811317 GAGCAAGCACCTCGTCGG 60.811 66.667 0.00 0.00 39.35 4.79
462 463 3.175240 CGAGCAAGCACCTCGTCG 61.175 66.667 11.12 0.00 45.17 5.12
466 467 1.841663 TTTTCGCGAGCAAGCACCTC 61.842 55.000 9.59 0.00 36.85 3.85
467 468 1.845809 CTTTTCGCGAGCAAGCACCT 61.846 55.000 9.59 0.00 36.85 4.00
468 469 1.441016 CTTTTCGCGAGCAAGCACC 60.441 57.895 9.59 0.00 36.85 5.01
469 470 0.166814 ATCTTTTCGCGAGCAAGCAC 59.833 50.000 20.02 0.00 36.85 4.40
470 471 0.166597 CATCTTTTCGCGAGCAAGCA 59.833 50.000 20.02 12.24 36.85 3.91
471 472 0.166814 ACATCTTTTCGCGAGCAAGC 59.833 50.000 20.02 0.00 0.00 4.01
472 473 1.728971 AGACATCTTTTCGCGAGCAAG 59.271 47.619 19.17 19.17 0.00 4.01
473 474 1.726791 GAGACATCTTTTCGCGAGCAA 59.273 47.619 9.59 5.74 0.00 3.91
474 475 1.350193 GAGACATCTTTTCGCGAGCA 58.650 50.000 9.59 0.00 0.00 4.26
475 476 0.647925 GGAGACATCTTTTCGCGAGC 59.352 55.000 9.59 0.00 0.00 5.03
476 477 1.656095 GTGGAGACATCTTTTCGCGAG 59.344 52.381 9.59 0.00 46.14 5.03
477 478 1.000394 TGTGGAGACATCTTTTCGCGA 60.000 47.619 3.71 3.71 46.14 5.87
478 479 1.428448 TGTGGAGACATCTTTTCGCG 58.572 50.000 0.00 0.00 46.14 5.87
479 480 2.548057 TGTTGTGGAGACATCTTTTCGC 59.452 45.455 0.00 0.00 46.14 4.70
480 481 3.559655 TGTGTTGTGGAGACATCTTTTCG 59.440 43.478 0.00 0.00 46.14 3.46
481 482 4.261197 GGTGTGTTGTGGAGACATCTTTTC 60.261 45.833 0.00 0.00 46.14 2.29
482 483 3.632145 GGTGTGTTGTGGAGACATCTTTT 59.368 43.478 0.00 0.00 46.14 2.27
483 484 3.214328 GGTGTGTTGTGGAGACATCTTT 58.786 45.455 0.00 0.00 46.14 2.52
484 485 2.487265 GGGTGTGTTGTGGAGACATCTT 60.487 50.000 0.00 0.00 46.14 2.40
485 486 1.072331 GGGTGTGTTGTGGAGACATCT 59.928 52.381 0.00 0.00 46.14 2.90
486 487 1.072331 AGGGTGTGTTGTGGAGACATC 59.928 52.381 0.00 0.00 46.14 3.06
487 488 1.140312 AGGGTGTGTTGTGGAGACAT 58.860 50.000 0.00 0.00 46.14 3.06
488 489 0.916086 AAGGGTGTGTTGTGGAGACA 59.084 50.000 0.00 0.00 38.70 3.41
489 490 1.947456 GAAAGGGTGTGTTGTGGAGAC 59.053 52.381 0.00 0.00 0.00 3.36
490 491 1.562008 TGAAAGGGTGTGTTGTGGAGA 59.438 47.619 0.00 0.00 0.00 3.71
491 492 1.676006 GTGAAAGGGTGTGTTGTGGAG 59.324 52.381 0.00 0.00 0.00 3.86
492 493 1.683629 GGTGAAAGGGTGTGTTGTGGA 60.684 52.381 0.00 0.00 0.00 4.02
493 494 0.744281 GGTGAAAGGGTGTGTTGTGG 59.256 55.000 0.00 0.00 0.00 4.17
494 495 1.468985 TGGTGAAAGGGTGTGTTGTG 58.531 50.000 0.00 0.00 0.00 3.33
495 496 2.031120 CATGGTGAAAGGGTGTGTTGT 58.969 47.619 0.00 0.00 0.00 3.32
496 497 2.031120 ACATGGTGAAAGGGTGTGTTG 58.969 47.619 0.00 0.00 0.00 3.33
497 498 2.452600 ACATGGTGAAAGGGTGTGTT 57.547 45.000 0.00 0.00 0.00 3.32
498 499 3.806949 ATACATGGTGAAAGGGTGTGT 57.193 42.857 0.00 0.00 0.00 3.72
499 500 7.012327 CACTTATATACATGGTGAAAGGGTGTG 59.988 40.741 0.00 0.00 0.00 3.82
500 501 7.054124 CACTTATATACATGGTGAAAGGGTGT 58.946 38.462 0.00 0.00 0.00 4.16
501 502 6.486657 CCACTTATATACATGGTGAAAGGGTG 59.513 42.308 0.00 0.00 0.00 4.61
502 503 6.410388 CCCACTTATATACATGGTGAAAGGGT 60.410 42.308 0.00 0.00 0.00 4.34
503 504 6.003950 CCCACTTATATACATGGTGAAAGGG 58.996 44.000 0.00 0.00 0.00 3.95
504 505 6.601332 ACCCACTTATATACATGGTGAAAGG 58.399 40.000 0.00 0.00 0.00 3.11
505 506 7.509546 AGACCCACTTATATACATGGTGAAAG 58.490 38.462 0.00 0.00 0.00 2.62
506 507 7.419750 GGAGACCCACTTATATACATGGTGAAA 60.420 40.741 0.00 0.00 0.00 2.69
507 508 6.042781 GGAGACCCACTTATATACATGGTGAA 59.957 42.308 0.00 0.00 0.00 3.18
508 509 5.542635 GGAGACCCACTTATATACATGGTGA 59.457 44.000 0.00 0.00 0.00 4.02
509 510 5.794894 GGAGACCCACTTATATACATGGTG 58.205 45.833 0.00 0.00 0.00 4.17
524 525 4.226193 TCATTGCAATGTGGGAGACCCA 62.226 50.000 32.67 11.85 45.32 4.51
525 526 1.616725 TCATTGCAATGTGGGAGACCC 60.617 52.381 32.67 0.00 41.95 4.46
526 527 1.838112 TCATTGCAATGTGGGAGACC 58.162 50.000 32.67 0.00 42.55 3.85
527 528 3.256631 AGTTTCATTGCAATGTGGGAGAC 59.743 43.478 32.67 20.69 37.65 3.36
528 529 3.499338 AGTTTCATTGCAATGTGGGAGA 58.501 40.909 32.67 14.57 37.65 3.71
529 530 3.947910 AGTTTCATTGCAATGTGGGAG 57.052 42.857 32.67 11.94 37.65 4.30
530 531 4.218200 CACTAGTTTCATTGCAATGTGGGA 59.782 41.667 32.67 15.61 37.65 4.37
531 532 4.218200 TCACTAGTTTCATTGCAATGTGGG 59.782 41.667 32.67 20.87 37.65 4.61
532 533 5.375417 TCACTAGTTTCATTGCAATGTGG 57.625 39.130 32.67 20.47 37.65 4.17
533 534 7.878477 AATTCACTAGTTTCATTGCAATGTG 57.122 32.000 32.67 23.13 37.65 3.21
537 538 9.421806 CCAAATAATTCACTAGTTTCATTGCAA 57.578 29.630 0.00 0.00 0.00 4.08
538 539 8.801299 TCCAAATAATTCACTAGTTTCATTGCA 58.199 29.630 0.00 0.00 0.00 4.08
539 540 9.076596 GTCCAAATAATTCACTAGTTTCATTGC 57.923 33.333 0.00 0.00 0.00 3.56
542 543 9.739276 TGAGTCCAAATAATTCACTAGTTTCAT 57.261 29.630 0.00 0.00 0.00 2.57
543 544 9.739276 ATGAGTCCAAATAATTCACTAGTTTCA 57.261 29.630 0.00 0.00 0.00 2.69
545 546 9.739276 TGATGAGTCCAAATAATTCACTAGTTT 57.261 29.630 0.00 0.00 0.00 2.66
546 547 9.911788 ATGATGAGTCCAAATAATTCACTAGTT 57.088 29.630 0.00 0.00 0.00 2.24
547 548 9.911788 AATGATGAGTCCAAATAATTCACTAGT 57.088 29.630 0.00 0.00 0.00 2.57
550 551 9.028284 ACAAATGATGAGTCCAAATAATTCACT 57.972 29.630 0.00 0.00 0.00 3.41
551 552 9.294030 GACAAATGATGAGTCCAAATAATTCAC 57.706 33.333 0.00 0.00 0.00 3.18
552 553 9.246670 AGACAAATGATGAGTCCAAATAATTCA 57.753 29.630 0.00 0.00 32.82 2.57
553 554 9.727627 GAGACAAATGATGAGTCCAAATAATTC 57.272 33.333 0.00 0.00 32.82 2.17
554 555 9.471702 AGAGACAAATGATGAGTCCAAATAATT 57.528 29.630 0.00 0.00 32.82 1.40
555 556 9.471702 AAGAGACAAATGATGAGTCCAAATAAT 57.528 29.630 0.00 0.00 32.82 1.28
556 557 8.868522 AAGAGACAAATGATGAGTCCAAATAA 57.131 30.769 0.00 0.00 32.82 1.40
557 558 8.868522 AAAGAGACAAATGATGAGTCCAAATA 57.131 30.769 0.00 0.00 32.82 1.40
558 559 7.771927 AAAGAGACAAATGATGAGTCCAAAT 57.228 32.000 0.00 0.00 32.82 2.32
559 560 7.428020 CAAAAGAGACAAATGATGAGTCCAAA 58.572 34.615 0.00 0.00 32.82 3.28
560 561 6.515531 GCAAAAGAGACAAATGATGAGTCCAA 60.516 38.462 0.00 0.00 32.82 3.53
561 562 5.048504 GCAAAAGAGACAAATGATGAGTCCA 60.049 40.000 0.00 0.00 32.82 4.02
562 563 5.182760 AGCAAAAGAGACAAATGATGAGTCC 59.817 40.000 0.00 0.00 32.82 3.85
563 564 6.084925 CAGCAAAAGAGACAAATGATGAGTC 58.915 40.000 0.00 0.00 29.35 3.36
564 565 5.048224 CCAGCAAAAGAGACAAATGATGAGT 60.048 40.000 0.00 0.00 29.35 3.41
565 566 5.399858 CCAGCAAAAGAGACAAATGATGAG 58.600 41.667 0.00 0.00 29.35 2.90
566 567 4.321452 GCCAGCAAAAGAGACAAATGATGA 60.321 41.667 0.00 0.00 29.35 2.92
567 568 3.924686 GCCAGCAAAAGAGACAAATGATG 59.075 43.478 0.00 0.00 0.00 3.07
568 569 3.575256 TGCCAGCAAAAGAGACAAATGAT 59.425 39.130 0.00 0.00 0.00 2.45
569 570 2.957680 TGCCAGCAAAAGAGACAAATGA 59.042 40.909 0.00 0.00 0.00 2.57
570 571 3.374220 TGCCAGCAAAAGAGACAAATG 57.626 42.857 0.00 0.00 0.00 2.32
571 572 3.385755 ACTTGCCAGCAAAAGAGACAAAT 59.614 39.130 6.52 0.00 35.33 2.32
572 573 2.760092 ACTTGCCAGCAAAAGAGACAAA 59.240 40.909 6.52 0.00 35.33 2.83
573 574 2.378038 ACTTGCCAGCAAAAGAGACAA 58.622 42.857 6.52 0.00 35.33 3.18
574 575 2.057137 ACTTGCCAGCAAAAGAGACA 57.943 45.000 6.52 0.00 35.33 3.41
575 576 4.379918 GGAATACTTGCCAGCAAAAGAGAC 60.380 45.833 6.52 0.00 35.33 3.36
576 577 3.758554 GGAATACTTGCCAGCAAAAGAGA 59.241 43.478 6.52 0.00 35.33 3.10
577 578 3.507233 TGGAATACTTGCCAGCAAAAGAG 59.493 43.478 6.52 0.00 35.33 2.85
578 579 3.495331 TGGAATACTTGCCAGCAAAAGA 58.505 40.909 6.52 0.00 35.33 2.52
579 580 3.841643 CTGGAATACTTGCCAGCAAAAG 58.158 45.455 6.52 0.00 44.53 2.27
580 581 3.940209 CTGGAATACTTGCCAGCAAAA 57.060 42.857 6.52 0.00 44.53 2.44
586 587 4.211125 TGTTTTGTCTGGAATACTTGCCA 58.789 39.130 0.00 0.00 0.00 4.92
587 588 4.846779 TGTTTTGTCTGGAATACTTGCC 57.153 40.909 0.00 0.00 0.00 4.52
588 589 6.533367 TGTTTTGTTTTGTCTGGAATACTTGC 59.467 34.615 0.00 0.00 0.00 4.01
589 590 8.472683 TTGTTTTGTTTTGTCTGGAATACTTG 57.527 30.769 0.00 0.00 0.00 3.16
590 591 9.665719 AATTGTTTTGTTTTGTCTGGAATACTT 57.334 25.926 0.00 0.00 0.00 2.24
594 595 9.612066 ACATAATTGTTTTGTTTTGTCTGGAAT 57.388 25.926 0.00 0.00 29.55 3.01
595 596 8.877779 CACATAATTGTTTTGTTTTGTCTGGAA 58.122 29.630 0.00 0.00 32.34 3.53
596 597 8.253810 TCACATAATTGTTTTGTTTTGTCTGGA 58.746 29.630 0.00 0.00 32.34 3.86
597 598 8.417780 TCACATAATTGTTTTGTTTTGTCTGG 57.582 30.769 0.00 0.00 32.34 3.86
598 599 9.086336 ACTCACATAATTGTTTTGTTTTGTCTG 57.914 29.630 0.00 0.00 32.34 3.51
667 668 1.406898 CTAGCAGTCGCCAGAATCTCA 59.593 52.381 0.00 0.00 39.83 3.27
668 669 1.867698 GCTAGCAGTCGCCAGAATCTC 60.868 57.143 10.63 0.00 39.83 2.75
675 676 2.752640 TACCGCTAGCAGTCGCCA 60.753 61.111 16.45 0.00 39.83 5.69
822 830 5.702065 TCCCTGCCATTTATTAGTGTGTA 57.298 39.130 0.00 0.00 0.00 2.90
848 856 3.668656 GTGCGCCAAATCTTAAACAACTC 59.331 43.478 4.18 0.00 0.00 3.01
932 940 4.991776 TGTGATCTTATTTTGGGGTGTGA 58.008 39.130 0.00 0.00 0.00 3.58
960 968 3.814504 ATTGGAGAAGGGAAGAGCAAA 57.185 42.857 0.00 0.00 0.00 3.68
1015 1023 3.790437 CTCCTCCATGCCCGTGCT 61.790 66.667 0.00 0.00 38.71 4.40
1056 1064 0.188342 AGAAAAGGAAAGCCAGGCCA 59.812 50.000 8.22 0.00 36.29 5.36
1065 1073 2.616842 GCACACGGAGAAGAAAAGGAAA 59.383 45.455 0.00 0.00 0.00 3.13
1072 1080 1.300620 CCACGCACACGGAGAAGAA 60.301 57.895 0.00 0.00 46.04 2.52
1311 1325 2.677979 GGGGAAGTTGTCGAAGCGC 61.678 63.158 0.00 0.00 0.00 5.92
2295 2820 3.000819 ATGAACGTCCCGCCAGGA 61.001 61.111 0.00 0.00 44.91 3.86
2311 2836 1.680522 CTGTACAGGCTCTCCGGCAT 61.681 60.000 15.49 0.00 41.46 4.40
2409 2934 1.433053 CGAACTGTTTCACCACGGCA 61.433 55.000 0.00 0.00 0.00 5.69
2688 3229 4.541779 TGTTTTATTTGCCGTGCAGTAAG 58.458 39.130 0.00 0.00 40.61 2.34
2694 3237 3.179048 GAGGATGTTTTATTTGCCGTGC 58.821 45.455 0.00 0.00 0.00 5.34
2698 3241 8.664798 GTTTTAATGGAGGATGTTTTATTTGCC 58.335 33.333 0.00 0.00 0.00 4.52
2738 3281 7.612065 AAACTATGATAGTACCATGGTGCTA 57.388 36.000 35.50 35.50 44.77 3.49
2742 3285 8.314751 GCATCTAAACTATGATAGTACCATGGT 58.685 37.037 23.55 23.55 38.26 3.55
2750 3293 9.836864 TCATGTTTGCATCTAAACTATGATAGT 57.163 29.630 0.00 0.00 40.36 2.12
2779 3322 2.676748 CTGGAGATGCTCTAACCTCCT 58.323 52.381 0.00 0.00 44.13 3.69
2781 3324 1.069978 GGCTGGAGATGCTCTAACCTC 59.930 57.143 0.00 0.00 0.00 3.85
2812 3355 2.697819 GCGATTTTAGGCGCCCTTA 58.302 52.632 26.15 7.15 46.93 2.69
2934 3482 4.287720 ACTTCGCCGAACTTTGAATTTTC 58.712 39.130 0.00 0.00 0.00 2.29
2938 3486 3.550030 CCAAACTTCGCCGAACTTTGAAT 60.550 43.478 24.16 0.00 31.71 2.57
3061 3614 3.456039 GACGACAACGACGACGGC 61.456 66.667 12.58 0.00 44.46 5.68
3085 3647 1.292223 CCGCGTCAAGGAGGAGAAA 59.708 57.895 4.92 0.00 0.00 2.52
3135 3697 2.192979 CGCCACCAGCCCACATAT 59.807 61.111 0.00 0.00 38.78 1.78
3286 3850 4.125695 ACGACGCGGCCCTAGAAC 62.126 66.667 12.47 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.