Multiple sequence alignment - TraesCS4A01G178100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G178100 chr4A 100.000 8012 0 0 1 8012 450336075 450344086 0.000000e+00 14796.0
1 TraesCS4A01G178100 chr4A 94.757 267 12 2 4282 4547 556696192 556696457 1.610000e-111 414.0
2 TraesCS4A01G178100 chr4A 100.000 28 0 0 2980 3007 3148318 3148291 1.500000e-02 52.8
3 TraesCS4A01G178100 chr4D 96.888 4145 93 14 152 4287 119744916 119749033 0.000000e+00 6907.0
4 TraesCS4A01G178100 chr4D 96.603 2149 66 6 4940 7082 119749691 119751838 0.000000e+00 3557.0
5 TraesCS4A01G178100 chr4D 84.906 795 59 23 7237 8008 119752007 119752763 0.000000e+00 747.0
6 TraesCS4A01G178100 chr4D 93.883 376 19 4 4537 4909 119749024 119749398 1.510000e-156 564.0
7 TraesCS4A01G178100 chr4D 94.064 219 10 2 4728 4945 119749397 119749613 5.990000e-86 329.0
8 TraesCS4A01G178100 chr4B 93.677 2214 83 17 1 2198 182234064 182236236 0.000000e+00 3260.0
9 TraesCS4A01G178100 chr4B 95.582 2037 79 7 5054 7082 182240788 182242821 0.000000e+00 3253.0
10 TraesCS4A01G178100 chr4B 90.633 1121 48 23 3177 4287 182239166 182240239 0.000000e+00 1435.0
11 TraesCS4A01G178100 chr4B 95.699 744 29 2 2180 2920 182236415 182237158 0.000000e+00 1194.0
12 TraesCS4A01G178100 chr4B 83.753 794 67 23 7237 8008 182243013 182243766 0.000000e+00 695.0
13 TraesCS4A01G178100 chr4B 97.260 219 5 1 2913 3130 182238960 182239178 3.530000e-98 370.0
14 TraesCS4A01G178100 chr4B 82.991 341 28 7 4721 5056 182240370 182240685 1.700000e-71 281.0
15 TraesCS4A01G178100 chr4B 88.360 189 15 5 4537 4720 182240230 182240416 3.760000e-53 220.0
16 TraesCS4A01G178100 chr4B 97.101 69 2 0 7083 7151 182242942 182243010 5.080000e-22 117.0
17 TraesCS4A01G178100 chr3A 98.084 261 4 1 4286 4545 630924984 630925244 3.410000e-123 453.0
18 TraesCS4A01G178100 chr3A 95.472 265 10 2 4282 4545 429625052 429624789 9.610000e-114 422.0
19 TraesCS4A01G178100 chr3A 95.057 263 11 2 4286 4546 509840217 509839955 5.790000e-111 412.0
20 TraesCS4A01G178100 chr3A 88.333 60 6 1 4662 4720 731738905 731738846 4.010000e-08 71.3
21 TraesCS4A01G178100 chr3A 89.286 56 2 3 7798 7853 418753073 418753022 5.190000e-07 67.6
22 TraesCS4A01G178100 chr5A 96.226 265 9 1 4282 4545 595917788 595917524 4.440000e-117 433.0
23 TraesCS4A01G178100 chr5A 95.113 266 12 1 4281 4545 635455556 635455821 1.240000e-112 418.0
24 TraesCS4A01G178100 chr5A 94.231 52 3 0 7807 7858 594959676 594959625 6.670000e-11 80.5
25 TraesCS4A01G178100 chr2A 96.183 262 9 1 4285 4545 606050392 606050131 2.070000e-115 427.0
26 TraesCS4A01G178100 chr7A 94.717 265 13 1 4282 4545 33371034 33371298 2.080000e-110 411.0
27 TraesCS4A01G178100 chr1A 95.019 261 12 1 4286 4545 287430879 287430619 7.480000e-110 409.0
28 TraesCS4A01G178100 chr6A 85.279 197 23 5 4723 4916 507589547 507589740 1.760000e-46 198.0
29 TraesCS4A01G178100 chr6A 96.970 33 0 1 7214 7246 602728345 602728376 4.000000e-03 54.7
30 TraesCS4A01G178100 chr6D 86.127 173 21 3 4744 4914 367127689 367127860 4.940000e-42 183.0
31 TraesCS4A01G178100 chr6D 85.549 173 22 3 4744 4914 367082101 367082272 2.300000e-40 178.0
32 TraesCS4A01G178100 chr6D 90.385 52 5 0 7809 7860 445417001 445417052 1.440000e-07 69.4
33 TraesCS4A01G178100 chr6D 94.595 37 1 1 2979 3014 34947973 34947937 1.000000e-03 56.5
34 TraesCS4A01G178100 chr5B 74.783 230 45 11 4722 4943 366021147 366021371 3.080000e-14 91.6
35 TraesCS4A01G178100 chr5B 97.778 45 1 0 7813 7857 192382493 192382537 2.400000e-10 78.7
36 TraesCS4A01G178100 chr5D 97.778 45 1 0 7813 7857 177683460 177683504 2.400000e-10 78.7
37 TraesCS4A01G178100 chr5D 97.674 43 1 0 7812 7854 230024100 230024142 3.100000e-09 75.0
38 TraesCS4A01G178100 chr3B 95.652 46 2 0 7808 7853 782841216 782841261 3.100000e-09 75.0
39 TraesCS4A01G178100 chr1D 94.000 50 2 1 7813 7861 253525986 253525937 3.100000e-09 75.0
40 TraesCS4A01G178100 chr1D 83.099 71 9 3 4652 4720 475530461 475530530 2.410000e-05 62.1
41 TraesCS4A01G178100 chr2B 87.931 58 4 2 7800 7857 65314909 65314963 1.870000e-06 65.8
42 TraesCS4A01G178100 chr6B 96.875 32 1 0 2979 3010 71867112 71867081 4.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G178100 chr4A 450336075 450344086 8011 False 14796.000000 14796 100.000000 1 8012 1 chr4A.!!$F1 8011
1 TraesCS4A01G178100 chr4D 119744916 119752763 7847 False 2420.800000 6907 93.268800 152 8008 5 chr4D.!!$F1 7856
2 TraesCS4A01G178100 chr4B 182234064 182243766 9702 False 1202.777778 3260 91.672889 1 8008 9 chr4B.!!$F1 8007

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
56 61 0.105778 CATCCCCTCTTTCTCGGAGC 59.894 60.000 0.00 0.0 0.00 4.70 F
117 122 0.107945 CCGAGCTCCTCTTTTCCCTG 60.108 60.000 8.47 0.0 0.00 4.45 F
124 129 0.254462 CCTCTTTTCCCTGCTCCTCC 59.746 60.000 0.00 0.0 0.00 4.30 F
157 162 0.746659 GCCATTACCCACAATGCTCC 59.253 55.000 0.00 0.0 35.06 4.70 F
306 318 0.962356 ATCTTGCGCCCCTTCTGTTG 60.962 55.000 4.18 0.0 0.00 3.33 F
1166 1185 0.963225 TGGATCAGACGGTCACGAAA 59.037 50.000 11.27 0.0 44.60 3.46 F
1446 1465 1.070758 TCTGTCTGTGAACAGCCTTCC 59.929 52.381 5.55 0.0 45.12 3.46 F
2286 2506 0.608856 ATCGGCACATGTTTCAGGCA 60.609 50.000 0.00 0.0 0.00 4.75 F
2539 2761 2.727123 ACATGGTGGTGTTCTGTTCA 57.273 45.000 0.00 0.0 0.00 3.18 F
4302 6338 0.042131 TGTACTCCCTCCGGTCCATT 59.958 55.000 0.00 0.0 0.00 3.16 F
4537 6573 0.037046 GCGGAGTAAAAAGGACCGGA 60.037 55.000 9.46 0.0 43.15 5.14 F
6086 8505 0.539051 GCCAGCCTGATGTCTACACT 59.461 55.000 0.00 0.0 0.00 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1166 1185 0.033699 GGGAAGCTCCTTGAATGCCT 60.034 55.000 0.00 0.00 36.57 4.75 R
1337 1356 0.250234 CCTCGAATTGTCCTCCTGCA 59.750 55.000 0.00 0.00 0.00 4.41 R
2071 2093 0.400213 ACAATTCTCCGTGGAGCCAA 59.600 50.000 11.17 1.90 41.71 4.52 R
2153 2175 4.156190 TGAGTTTAGTGAAGGAGCTACTCG 59.844 45.833 0.00 0.00 0.00 4.18 R
2210 2430 3.061295 GCACACTATCACGTGATGAACAG 59.939 47.826 35.46 27.09 41.93 3.16 R
2284 2504 4.342092 AGTTAAACCCAGATGCCATTATGC 59.658 41.667 0.00 0.00 0.00 3.14 R
3365 5397 3.201708 CCTGATCCATCCTTGGTCTCTTT 59.798 47.826 0.00 0.00 44.06 2.52 R
3603 5635 0.815615 GCCAAATGGAGCCGGTAGAG 60.816 60.000 1.90 0.00 37.39 2.43 R
4518 6554 0.037046 TCCGGTCCTTTTTACTCCGC 60.037 55.000 0.00 0.00 39.87 5.54 R
5679 8095 0.741221 CTGTTACCTGAAGCGCCTCC 60.741 60.000 2.29 0.00 0.00 4.30 R
6518 8937 1.089112 CAGCAAATGCCTCGATCACA 58.911 50.000 0.94 0.00 43.38 3.58 R
7697 10257 0.026803 GGCTTCGCTGCAAGAATACG 59.973 55.000 13.51 0.00 34.07 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 35 4.080299 GGTACCCTATCCATCCATCCAATC 60.080 50.000 0.00 0.00 0.00 2.67
39 44 1.925623 TCCATCCAATCCCCCTTCAT 58.074 50.000 0.00 0.00 0.00 2.57
48 53 0.123266 TCCCCCTTCATCCCCTCTTT 59.877 55.000 0.00 0.00 0.00 2.52
49 54 0.553333 CCCCCTTCATCCCCTCTTTC 59.447 60.000 0.00 0.00 0.00 2.62
50 55 1.601248 CCCCTTCATCCCCTCTTTCT 58.399 55.000 0.00 0.00 0.00 2.52
51 56 1.492599 CCCCTTCATCCCCTCTTTCTC 59.507 57.143 0.00 0.00 0.00 2.87
52 57 1.139853 CCCTTCATCCCCTCTTTCTCG 59.860 57.143 0.00 0.00 0.00 4.04
53 58 1.139853 CCTTCATCCCCTCTTTCTCGG 59.860 57.143 0.00 0.00 0.00 4.63
54 59 2.111384 CTTCATCCCCTCTTTCTCGGA 58.889 52.381 0.00 0.00 0.00 4.55
55 60 1.781786 TCATCCCCTCTTTCTCGGAG 58.218 55.000 0.00 0.00 0.00 4.63
56 61 0.105778 CATCCCCTCTTTCTCGGAGC 59.894 60.000 0.00 0.00 0.00 4.70
117 122 0.107945 CCGAGCTCCTCTTTTCCCTG 60.108 60.000 8.47 0.00 0.00 4.45
118 123 0.742635 CGAGCTCCTCTTTTCCCTGC 60.743 60.000 8.47 0.00 0.00 4.85
119 124 0.617935 GAGCTCCTCTTTTCCCTGCT 59.382 55.000 0.87 0.00 0.00 4.24
120 125 0.617935 AGCTCCTCTTTTCCCTGCTC 59.382 55.000 0.00 0.00 0.00 4.26
121 126 0.393673 GCTCCTCTTTTCCCTGCTCC 60.394 60.000 0.00 0.00 0.00 4.70
122 127 1.284313 CTCCTCTTTTCCCTGCTCCT 58.716 55.000 0.00 0.00 0.00 3.69
123 128 1.209261 CTCCTCTTTTCCCTGCTCCTC 59.791 57.143 0.00 0.00 0.00 3.71
124 129 0.254462 CCTCTTTTCCCTGCTCCTCC 59.746 60.000 0.00 0.00 0.00 4.30
125 130 0.254462 CTCTTTTCCCTGCTCCTCCC 59.746 60.000 0.00 0.00 0.00 4.30
126 131 1.208165 TCTTTTCCCTGCTCCTCCCC 61.208 60.000 0.00 0.00 0.00 4.81
127 132 2.543067 CTTTTCCCTGCTCCTCCCCG 62.543 65.000 0.00 0.00 0.00 5.73
148 153 3.093835 CCCCTCCGCCATTACCCA 61.094 66.667 0.00 0.00 0.00 4.51
157 162 0.746659 GCCATTACCCACAATGCTCC 59.253 55.000 0.00 0.00 35.06 4.70
231 236 3.902881 TTCTTCTCTCCATCTTGCTCC 57.097 47.619 0.00 0.00 0.00 4.70
248 256 9.723601 ATCTTGCTCCTCAGATTTATAAGATTC 57.276 33.333 0.00 0.00 30.61 2.52
249 257 8.708378 TCTTGCTCCTCAGATTTATAAGATTCA 58.292 33.333 0.00 0.00 0.00 2.57
306 318 0.962356 ATCTTGCGCCCCTTCTGTTG 60.962 55.000 4.18 0.00 0.00 3.33
412 425 8.011844 TGCTACATCTATATGTGGTATCCATC 57.988 38.462 4.09 0.00 45.99 3.51
496 509 1.827344 ACGCATCAGGATGTCTCAAGA 59.173 47.619 10.69 0.00 40.80 3.02
497 510 2.234661 ACGCATCAGGATGTCTCAAGAA 59.765 45.455 10.69 0.00 40.80 2.52
514 527 4.523173 TCAAGAACTCGTGTCTTCATACCT 59.477 41.667 0.00 0.00 0.00 3.08
519 532 6.433404 AGAACTCGTGTCTTCATACCTCTTTA 59.567 38.462 0.00 0.00 0.00 1.85
532 545 7.686434 TCATACCTCTTTACTTGTTTAAGCCT 58.314 34.615 0.00 0.00 37.43 4.58
561 574 7.836183 AGCTCTTGGATTGGACATACTTAATTT 59.164 33.333 0.00 0.00 0.00 1.82
570 583 7.517614 TGGACATACTTAATTTTCAACAGCA 57.482 32.000 0.00 0.00 0.00 4.41
618 634 2.355837 GCACGTCAGTCCGCTTCA 60.356 61.111 0.00 0.00 0.00 3.02
642 658 2.012673 GATCTTGGCCACATGTCACTC 58.987 52.381 3.88 0.00 0.00 3.51
682 699 8.552034 GCATAAGTAATACTGGTTTGAAGCTAG 58.448 37.037 0.00 0.00 0.00 3.42
683 700 9.601217 CATAAGTAATACTGGTTTGAAGCTAGT 57.399 33.333 3.36 3.36 0.00 2.57
717 734 5.588568 CAAACTTAATTTGCATTTGCCGA 57.411 34.783 0.00 0.00 41.30 5.54
720 737 2.663826 TAATTTGCATTTGCCGACCC 57.336 45.000 0.00 0.00 41.18 4.46
726 743 1.064758 TGCATTTGCCGACCCTCTAAT 60.065 47.619 0.00 0.00 41.18 1.73
736 753 1.153449 CCCTCTAATTGCACGCGGA 60.153 57.895 12.47 0.00 0.00 5.54
737 754 1.154205 CCCTCTAATTGCACGCGGAG 61.154 60.000 12.47 3.23 0.00 4.63
752 769 4.043200 GAGCACGCCACCTTTGCC 62.043 66.667 0.00 0.00 36.91 4.52
832 849 9.191995 CAAACAGTTCCACCATTTCTTTTATAC 57.808 33.333 0.00 0.00 0.00 1.47
833 850 7.141100 ACAGTTCCACCATTTCTTTTATACG 57.859 36.000 0.00 0.00 0.00 3.06
834 851 6.713450 ACAGTTCCACCATTTCTTTTATACGT 59.287 34.615 0.00 0.00 0.00 3.57
835 852 7.879160 ACAGTTCCACCATTTCTTTTATACGTA 59.121 33.333 0.00 0.00 0.00 3.57
882 899 2.111756 GAACGCTGCAAACAGTTTGAG 58.888 47.619 27.16 20.47 46.30 3.02
952 971 3.732721 GCAAGTGTTTCTTTGCATCTGTC 59.267 43.478 4.48 0.00 33.63 3.51
977 996 7.660208 TCACTAACACCTTCTTATCCTTTGAAC 59.340 37.037 0.00 0.00 0.00 3.18
999 1018 2.159421 GCAGGTGCTTGATGATCACAAG 60.159 50.000 22.94 22.94 44.92 3.16
1011 1030 7.875327 TGATGATCACAAGATGTCATCAAAT 57.125 32.000 15.20 1.20 44.22 2.32
1134 1153 7.855784 TCTTCTTATCCTTGTGATATGCCTA 57.144 36.000 0.00 0.00 35.87 3.93
1166 1185 0.963225 TGGATCAGACGGTCACGAAA 59.037 50.000 11.27 0.00 44.60 3.46
1313 1332 3.703052 GAGAATGGGCCTGTTGAATCAAT 59.297 43.478 4.53 0.00 0.00 2.57
1326 1345 7.407393 TGTTGAATCAATGGATAAAGATGCA 57.593 32.000 0.00 0.00 37.85 3.96
1334 1353 8.070034 TCAATGGATAAAGATGCAGTTCAATT 57.930 30.769 0.00 0.00 36.77 2.32
1337 1356 5.716228 TGGATAAAGATGCAGTTCAATTGGT 59.284 36.000 5.42 0.00 0.00 3.67
1446 1465 1.070758 TCTGTCTGTGAACAGCCTTCC 59.929 52.381 5.55 0.00 45.12 3.46
1473 1492 2.906182 CTACTGCCGATTCTGCGCCA 62.906 60.000 4.18 0.00 0.00 5.69
1506 1525 4.790718 ACCTGAGTTTTCTTACCTTGGT 57.209 40.909 0.00 0.00 0.00 3.67
1584 1603 2.551504 GGACAACGTAATTGGTGAGGGT 60.552 50.000 0.00 0.00 43.20 4.34
1602 1621 3.054655 AGGGTGGATATGGTGTTGTGTAC 60.055 47.826 0.00 0.00 0.00 2.90
1908 1927 3.724478 ACCCAGAGGTCAGAATATGTCA 58.276 45.455 0.00 0.00 46.45 3.58
2071 2093 5.591067 TGTTAACAACGGGAATCTTGAAAGT 59.409 36.000 5.64 0.00 0.00 2.66
2210 2430 9.103861 CTTAGGATCTCTGTACTTCCAAAATTC 57.896 37.037 0.00 0.00 0.00 2.17
2222 2442 5.299279 ACTTCCAAAATTCTGTTCATCACGT 59.701 36.000 0.00 0.00 0.00 4.49
2284 2504 1.135603 CACATCGGCACATGTTTCAGG 60.136 52.381 0.00 0.00 34.60 3.86
2286 2506 0.608856 ATCGGCACATGTTTCAGGCA 60.609 50.000 0.00 0.00 0.00 4.75
2321 2541 7.178274 TCTGGGTTTAACTATCGTACCAAGTTA 59.822 37.037 0.00 5.64 35.23 2.24
2340 2560 9.431887 CCAAGTTATTAGCCGCTAGAAATTATA 57.568 33.333 0.00 0.00 0.00 0.98
2539 2761 2.727123 ACATGGTGGTGTTCTGTTCA 57.273 45.000 0.00 0.00 0.00 3.18
2546 2768 3.251004 GGTGGTGTTCTGTTCAGTCATTC 59.749 47.826 0.00 0.91 0.00 2.67
2579 2801 8.847196 GTTCTTAATTTTACCTATAGCCTTGGG 58.153 37.037 0.00 0.00 0.00 4.12
2836 3058 7.332926 GCCATGGTATATATGAGTCAGTTTCTG 59.667 40.741 14.67 0.00 0.00 3.02
3365 5397 4.371786 GGTGTATCGATCTGAATGCTGAA 58.628 43.478 0.00 0.00 0.00 3.02
3603 5635 9.231297 TCTTATTTGGTTATCCTATATGCTTGC 57.769 33.333 0.00 0.00 34.23 4.01
3611 5643 2.826128 TCCTATATGCTTGCTCTACCGG 59.174 50.000 0.00 0.00 0.00 5.28
3872 5904 6.945938 TTTCGTCCAAATGAGGTAAAGAAA 57.054 33.333 0.00 0.00 0.00 2.52
3881 5913 7.867909 CCAAATGAGGTAAAGAAAGAAGGAAAC 59.132 37.037 0.00 0.00 0.00 2.78
3894 5926 7.785028 AGAAAGAAGGAAACCCTAAACATCTTT 59.215 33.333 7.45 7.45 38.02 2.52
4155 6190 8.985805 GCTACAGACTTCTCTTATCTCTACTAC 58.014 40.741 0.00 0.00 0.00 2.73
4234 6270 2.038387 GTGGTTGTCACCTGTCAGTT 57.962 50.000 0.00 0.00 44.61 3.16
4283 6319 9.336171 GAAATTTTCAGCCTAGAATAGAGTGAT 57.664 33.333 4.25 0.00 42.77 3.06
4284 6320 8.674263 AATTTTCAGCCTAGAATAGAGTGATG 57.326 34.615 0.00 0.00 42.77 3.07
4285 6321 6.798427 TTTCAGCCTAGAATAGAGTGATGT 57.202 37.500 0.00 0.00 42.77 3.06
4287 6323 6.885952 TCAGCCTAGAATAGAGTGATGTAC 57.114 41.667 0.00 0.00 42.77 2.90
4288 6324 6.606069 TCAGCCTAGAATAGAGTGATGTACT 58.394 40.000 0.00 0.00 42.77 2.73
4296 6332 3.209091 AGTGATGTACTCCCTCCGG 57.791 57.895 0.00 0.00 33.17 5.14
4297 6333 0.335361 AGTGATGTACTCCCTCCGGT 59.665 55.000 0.00 0.00 33.17 5.28
4298 6334 0.745468 GTGATGTACTCCCTCCGGTC 59.255 60.000 0.00 0.00 0.00 4.79
4299 6335 0.396695 TGATGTACTCCCTCCGGTCC 60.397 60.000 0.00 0.00 0.00 4.46
4300 6336 0.396695 GATGTACTCCCTCCGGTCCA 60.397 60.000 0.00 0.00 0.00 4.02
4301 6337 0.264955 ATGTACTCCCTCCGGTCCAT 59.735 55.000 0.00 0.00 0.00 3.41
4302 6338 0.042131 TGTACTCCCTCCGGTCCATT 59.958 55.000 0.00 0.00 0.00 3.16
4303 6339 1.201424 GTACTCCCTCCGGTCCATTT 58.799 55.000 0.00 0.00 0.00 2.32
4304 6340 1.558294 GTACTCCCTCCGGTCCATTTT 59.442 52.381 0.00 0.00 0.00 1.82
4305 6341 1.961133 ACTCCCTCCGGTCCATTTTA 58.039 50.000 0.00 0.00 0.00 1.52
4306 6342 1.838077 ACTCCCTCCGGTCCATTTTAG 59.162 52.381 0.00 0.00 0.00 1.85
4307 6343 1.838077 CTCCCTCCGGTCCATTTTAGT 59.162 52.381 0.00 0.00 0.00 2.24
4308 6344 2.238898 CTCCCTCCGGTCCATTTTAGTT 59.761 50.000 0.00 0.00 0.00 2.24
4309 6345 2.026636 TCCCTCCGGTCCATTTTAGTTG 60.027 50.000 0.00 0.00 0.00 3.16
4310 6346 1.743394 CCTCCGGTCCATTTTAGTTGC 59.257 52.381 0.00 0.00 0.00 4.17
4311 6347 2.432444 CTCCGGTCCATTTTAGTTGCA 58.568 47.619 0.00 0.00 0.00 4.08
4312 6348 3.016736 CTCCGGTCCATTTTAGTTGCAT 58.983 45.455 0.00 0.00 0.00 3.96
4313 6349 4.196193 CTCCGGTCCATTTTAGTTGCATA 58.804 43.478 0.00 0.00 0.00 3.14
4314 6350 4.787551 TCCGGTCCATTTTAGTTGCATAT 58.212 39.130 0.00 0.00 0.00 1.78
4315 6351 5.931294 TCCGGTCCATTTTAGTTGCATATA 58.069 37.500 0.00 0.00 0.00 0.86
4316 6352 6.358178 TCCGGTCCATTTTAGTTGCATATAA 58.642 36.000 0.00 0.00 0.00 0.98
4317 6353 6.485313 TCCGGTCCATTTTAGTTGCATATAAG 59.515 38.462 0.00 0.00 0.00 1.73
4318 6354 6.262273 CCGGTCCATTTTAGTTGCATATAAGT 59.738 38.462 0.00 0.00 0.00 2.24
4319 6355 7.201785 CCGGTCCATTTTAGTTGCATATAAGTT 60.202 37.037 0.00 0.00 0.00 2.66
4320 6356 8.188139 CGGTCCATTTTAGTTGCATATAAGTTT 58.812 33.333 0.00 0.00 0.00 2.66
4321 6357 9.869757 GGTCCATTTTAGTTGCATATAAGTTTT 57.130 29.630 0.00 0.00 0.00 2.43
4331 6367 9.463443 AGTTGCATATAAGTTTTGTTTGAAGTC 57.537 29.630 0.00 0.00 0.00 3.01
4332 6368 9.243637 GTTGCATATAAGTTTTGTTTGAAGTCA 57.756 29.630 0.00 0.00 0.00 3.41
4333 6369 9.809096 TTGCATATAAGTTTTGTTTGAAGTCAA 57.191 25.926 0.00 0.00 0.00 3.18
4334 6370 9.809096 TGCATATAAGTTTTGTTTGAAGTCAAA 57.191 25.926 2.32 2.32 42.90 2.69
4338 6374 8.947055 ATAAGTTTTGTTTGAAGTCAAAGCAT 57.053 26.923 6.72 5.35 45.36 3.79
4339 6375 6.892310 AGTTTTGTTTGAAGTCAAAGCATC 57.108 33.333 6.72 0.00 45.36 3.91
4340 6376 6.633856 AGTTTTGTTTGAAGTCAAAGCATCT 58.366 32.000 6.72 1.10 45.36 2.90
4341 6377 6.753744 AGTTTTGTTTGAAGTCAAAGCATCTC 59.246 34.615 6.72 0.00 45.36 2.75
4342 6378 6.455360 TTTGTTTGAAGTCAAAGCATCTCT 57.545 33.333 6.72 0.00 45.36 3.10
4343 6379 7.566760 TTTGTTTGAAGTCAAAGCATCTCTA 57.433 32.000 6.72 0.00 45.36 2.43
4344 6380 6.545504 TGTTTGAAGTCAAAGCATCTCTAC 57.454 37.500 6.72 0.00 45.36 2.59
4345 6381 6.291377 TGTTTGAAGTCAAAGCATCTCTACT 58.709 36.000 6.72 0.00 45.36 2.57
4346 6382 6.767902 TGTTTGAAGTCAAAGCATCTCTACTT 59.232 34.615 6.72 0.00 45.36 2.24
4347 6383 7.283127 TGTTTGAAGTCAAAGCATCTCTACTTT 59.717 33.333 6.72 0.00 45.36 2.66
4353 6389 4.537135 AAAGCATCTCTACTTTGACCGA 57.463 40.909 0.00 0.00 34.88 4.69
4354 6390 4.537135 AAGCATCTCTACTTTGACCGAA 57.463 40.909 0.00 0.00 0.00 4.30
4355 6391 4.744795 AGCATCTCTACTTTGACCGAAT 57.255 40.909 0.00 0.00 0.00 3.34
4356 6392 5.091261 AGCATCTCTACTTTGACCGAATT 57.909 39.130 0.00 0.00 0.00 2.17
4357 6393 5.491982 AGCATCTCTACTTTGACCGAATTT 58.508 37.500 0.00 0.00 0.00 1.82
4358 6394 6.640518 AGCATCTCTACTTTGACCGAATTTA 58.359 36.000 0.00 0.00 0.00 1.40
4359 6395 7.275920 AGCATCTCTACTTTGACCGAATTTAT 58.724 34.615 0.00 0.00 0.00 1.40
4360 6396 8.421784 AGCATCTCTACTTTGACCGAATTTATA 58.578 33.333 0.00 0.00 0.00 0.98
4361 6397 9.042008 GCATCTCTACTTTGACCGAATTTATAA 57.958 33.333 0.00 0.00 0.00 0.98
4389 6425 9.915629 AAAAAGTATTAACATTTACGATGCCAA 57.084 25.926 0.00 0.00 0.00 4.52
4390 6426 9.915629 AAAAGTATTAACATTTACGATGCCAAA 57.084 25.926 0.00 0.00 0.00 3.28
4392 6428 9.730420 AAGTATTAACATTTACGATGCCAAATC 57.270 29.630 0.00 0.00 0.00 2.17
4393 6429 8.898761 AGTATTAACATTTACGATGCCAAATCA 58.101 29.630 0.00 0.00 0.00 2.57
4394 6430 9.509855 GTATTAACATTTACGATGCCAAATCAA 57.490 29.630 0.00 0.00 0.00 2.57
4396 6432 8.994429 TTAACATTTACGATGCCAAATCAATT 57.006 26.923 0.00 0.00 0.00 2.32
4397 6433 7.903995 AACATTTACGATGCCAAATCAATTT 57.096 28.000 0.00 0.00 0.00 1.82
4398 6434 7.903995 ACATTTACGATGCCAAATCAATTTT 57.096 28.000 0.00 0.00 0.00 1.82
4399 6435 7.741198 ACATTTACGATGCCAAATCAATTTTG 58.259 30.769 0.00 0.00 43.64 2.44
4400 6436 7.387397 ACATTTACGATGCCAAATCAATTTTGT 59.613 29.630 0.00 0.00 42.68 2.83
4401 6437 7.721286 TTTACGATGCCAAATCAATTTTGTT 57.279 28.000 0.00 0.00 42.68 2.83
4402 6438 8.818141 TTTACGATGCCAAATCAATTTTGTTA 57.182 26.923 0.00 0.00 42.68 2.41
4403 6439 6.949578 ACGATGCCAAATCAATTTTGTTAG 57.050 33.333 0.00 0.00 42.68 2.34
4404 6440 6.686630 ACGATGCCAAATCAATTTTGTTAGA 58.313 32.000 0.00 0.00 42.68 2.10
4405 6441 7.322664 ACGATGCCAAATCAATTTTGTTAGAT 58.677 30.769 0.00 0.00 42.68 1.98
4406 6442 7.818930 ACGATGCCAAATCAATTTTGTTAGATT 59.181 29.630 0.00 0.00 42.68 2.40
4407 6443 8.323140 CGATGCCAAATCAATTTTGTTAGATTC 58.677 33.333 0.00 0.00 42.68 2.52
4408 6444 9.153721 GATGCCAAATCAATTTTGTTAGATTCA 57.846 29.630 0.00 0.00 42.68 2.57
4409 6445 9.675464 ATGCCAAATCAATTTTGTTAGATTCAT 57.325 25.926 0.00 0.00 42.68 2.57
4410 6446 9.504708 TGCCAAATCAATTTTGTTAGATTCATT 57.495 25.926 0.00 0.00 42.68 2.57
4429 6465 9.438291 GATTCATTACGAAATGTAGTTTCATGG 57.562 33.333 0.00 0.00 45.24 3.66
4430 6466 7.315247 TCATTACGAAATGTAGTTTCATGGG 57.685 36.000 0.00 0.00 45.24 4.00
4431 6467 7.106890 TCATTACGAAATGTAGTTTCATGGGA 58.893 34.615 0.00 0.00 45.24 4.37
4432 6468 7.773224 TCATTACGAAATGTAGTTTCATGGGAT 59.227 33.333 0.00 0.00 45.24 3.85
4433 6469 9.051679 CATTACGAAATGTAGTTTCATGGGATA 57.948 33.333 0.00 0.00 45.24 2.59
4434 6470 9.793259 ATTACGAAATGTAGTTTCATGGGATAT 57.207 29.630 0.00 0.00 45.24 1.63
4450 6486 9.919416 TCATGGGATATATATTTGGTATGGTTG 57.081 33.333 0.00 0.00 0.00 3.77
4451 6487 9.919416 CATGGGATATATATTTGGTATGGTTGA 57.081 33.333 0.00 0.00 0.00 3.18
4506 6542 6.203808 ACTTTACAAAGTTTGACTTGACCC 57.796 37.500 22.23 0.00 46.52 4.46
4507 6543 5.712917 ACTTTACAAAGTTTGACTTGACCCA 59.287 36.000 22.23 0.00 46.52 4.51
4508 6544 6.209788 ACTTTACAAAGTTTGACTTGACCCAA 59.790 34.615 22.23 1.18 46.52 4.12
4509 6545 6.591750 TTACAAAGTTTGACTTGACCCAAA 57.408 33.333 22.23 0.00 38.66 3.28
4510 6546 5.675684 ACAAAGTTTGACTTGACCCAAAT 57.324 34.783 22.23 0.00 38.66 2.32
4511 6547 5.660460 ACAAAGTTTGACTTGACCCAAATC 58.340 37.500 22.23 0.00 38.66 2.17
4512 6548 5.422012 ACAAAGTTTGACTTGACCCAAATCT 59.578 36.000 22.23 0.00 38.66 2.40
4513 6549 6.605594 ACAAAGTTTGACTTGACCCAAATCTA 59.394 34.615 22.23 0.00 38.66 1.98
4514 6550 7.123547 ACAAAGTTTGACTTGACCCAAATCTAA 59.876 33.333 22.23 0.00 38.66 2.10
4515 6551 7.839680 AAGTTTGACTTGACCCAAATCTAAT 57.160 32.000 0.00 0.00 37.00 1.73
4516 6552 8.934023 AAGTTTGACTTGACCCAAATCTAATA 57.066 30.769 0.00 0.00 37.00 0.98
4517 6553 9.533831 AAGTTTGACTTGACCCAAATCTAATAT 57.466 29.630 0.00 0.00 37.00 1.28
4518 6554 8.960591 AGTTTGACTTGACCCAAATCTAATATG 58.039 33.333 0.00 0.00 35.14 1.78
4519 6555 6.942532 TGACTTGACCCAAATCTAATATGC 57.057 37.500 0.00 0.00 0.00 3.14
4520 6556 5.527214 TGACTTGACCCAAATCTAATATGCG 59.473 40.000 0.00 0.00 0.00 4.73
4521 6557 4.821805 ACTTGACCCAAATCTAATATGCGG 59.178 41.667 0.00 0.00 0.00 5.69
4522 6558 4.698201 TGACCCAAATCTAATATGCGGA 57.302 40.909 0.00 0.00 0.00 5.54
4523 6559 4.641396 TGACCCAAATCTAATATGCGGAG 58.359 43.478 0.00 0.00 0.00 4.63
4524 6560 4.102524 TGACCCAAATCTAATATGCGGAGT 59.897 41.667 0.00 0.00 0.00 3.85
4525 6561 5.305902 TGACCCAAATCTAATATGCGGAGTA 59.694 40.000 0.00 0.00 0.00 2.59
4526 6562 6.182507 ACCCAAATCTAATATGCGGAGTAA 57.817 37.500 0.00 0.00 0.00 2.24
4527 6563 6.597562 ACCCAAATCTAATATGCGGAGTAAA 58.402 36.000 0.00 0.00 0.00 2.01
4528 6564 7.057894 ACCCAAATCTAATATGCGGAGTAAAA 58.942 34.615 0.00 0.00 0.00 1.52
4529 6565 7.558444 ACCCAAATCTAATATGCGGAGTAAAAA 59.442 33.333 0.00 0.00 0.00 1.94
4530 6566 8.076178 CCCAAATCTAATATGCGGAGTAAAAAG 58.924 37.037 0.00 0.00 0.00 2.27
4531 6567 8.076178 CCAAATCTAATATGCGGAGTAAAAAGG 58.924 37.037 0.00 0.00 0.00 3.11
4532 6568 8.836413 CAAATCTAATATGCGGAGTAAAAAGGA 58.164 33.333 0.00 0.00 0.00 3.36
4533 6569 7.964604 ATCTAATATGCGGAGTAAAAAGGAC 57.035 36.000 0.00 0.00 0.00 3.85
4534 6570 6.285990 TCTAATATGCGGAGTAAAAAGGACC 58.714 40.000 0.00 0.00 0.00 4.46
4535 6571 1.734163 ATGCGGAGTAAAAAGGACCG 58.266 50.000 0.00 0.00 45.26 4.79
4536 6572 0.320946 TGCGGAGTAAAAAGGACCGG 60.321 55.000 0.00 0.00 43.15 5.28
4537 6573 0.037046 GCGGAGTAAAAAGGACCGGA 60.037 55.000 9.46 0.00 43.15 5.14
4538 6574 2.005560 GCGGAGTAAAAAGGACCGGAG 61.006 57.143 9.46 0.00 43.15 4.63
4686 6723 1.749634 CCTCCGTCTGGGTTACTAGTG 59.250 57.143 5.39 0.00 37.00 2.74
4689 6726 2.040813 TCCGTCTGGGTTACTAGTGACT 59.959 50.000 16.47 0.00 37.00 3.41
4693 6730 4.483311 GTCTGGGTTACTAGTGACTTTCG 58.517 47.826 16.47 4.67 0.00 3.46
4735 6772 7.563724 TGACCTTAGTTGGTTTATTAGTCCT 57.436 36.000 0.00 0.00 41.00 3.85
4762 6799 9.646427 TTTTGTATTTTGTGCTAAACTTTGACT 57.354 25.926 0.00 0.00 0.00 3.41
4916 7136 2.559698 TTGACCCAAAATGCGAGAGA 57.440 45.000 0.00 0.00 0.00 3.10
4945 7165 5.189145 ACAAACCCGGATGAAGATAGTACTT 59.811 40.000 0.73 0.00 0.00 2.24
4947 7167 5.952347 ACCCGGATGAAGATAGTACTTTT 57.048 39.130 0.73 0.00 0.00 2.27
5012 7318 5.300752 TCTGTCACAAGTCTTTCAGGATTC 58.699 41.667 0.00 0.00 0.00 2.52
5152 7568 9.308318 GTCACTAGTCTCTTTTGGAATTATCTC 57.692 37.037 0.00 0.00 0.00 2.75
5307 7723 1.357690 CACTAATACTCGCCGCCGA 59.642 57.895 0.00 0.00 42.01 5.54
5469 7885 4.101448 CACTGGAAGGCGGGGGAG 62.101 72.222 0.00 0.00 39.30 4.30
5724 8142 5.184864 CACCAACCAGCTATACCAATCAAAA 59.815 40.000 0.00 0.00 0.00 2.44
5761 8179 7.701809 TTTGTAATTTCCCTTTTACTTTGCG 57.298 32.000 0.00 0.00 31.16 4.85
5783 8201 4.495184 CGTCGCACCATTTTAGGAATTACC 60.495 45.833 0.00 0.00 39.35 2.85
5786 8204 5.099575 CGCACCATTTTAGGAATTACCAAC 58.900 41.667 0.00 0.00 42.04 3.77
5928 8347 2.011046 GCCAGCCTTCTCTAGCACAAG 61.011 57.143 0.00 0.00 0.00 3.16
6053 8472 4.240888 TCAAGCTTCTCGAAGACATGAAG 58.759 43.478 10.68 5.68 40.79 3.02
6086 8505 0.539051 GCCAGCCTGATGTCTACACT 59.461 55.000 0.00 0.00 0.00 3.55
6257 8676 4.980573 ACGATATGGAGAAGCTACTCTCT 58.019 43.478 13.76 0.37 41.45 3.10
6503 8922 2.743183 GCTAGCATTTCCATGGACGACT 60.743 50.000 15.91 12.11 0.00 4.18
6509 8928 1.262417 TTCCATGGACGACTGCTACA 58.738 50.000 15.91 0.00 0.00 2.74
6518 8937 4.181578 GGACGACTGCTACATACAACAAT 58.818 43.478 0.00 0.00 0.00 2.71
6538 8957 1.089920 GTGATCGAGGCATTTGCTGT 58.910 50.000 2.12 0.00 41.70 4.40
6602 9021 1.630126 GCTCAGAGGGGATGAAGCCA 61.630 60.000 0.00 0.00 0.00 4.75
6626 9045 7.378966 CAGATACAAAGACCTTCTGTTGTCTA 58.621 38.462 0.00 0.00 40.84 2.59
6638 9057 6.128363 CCTTCTGTTGTCTAATAAACGGGTTC 60.128 42.308 0.00 0.00 34.14 3.62
6707 9126 3.825833 GAGGCTCGATGTACCGGCG 62.826 68.421 0.00 0.00 0.00 6.46
6713 9132 0.041047 TCGATGTACCGGCGAATACG 60.041 55.000 9.30 6.65 42.93 3.06
6719 9138 1.848608 GTACCGGCGAATACGTCTTTC 59.151 52.381 9.30 0.00 42.31 2.62
6810 9229 4.095932 ACATGAAGCATATGCAGTGTGAAG 59.904 41.667 28.62 12.77 45.16 3.02
6878 9297 5.359194 AAGGAATGACCGACAAGATGTAT 57.641 39.130 0.00 0.00 44.74 2.29
6935 9354 4.283467 ACTGAGCTTGTCATGGTGTAACTA 59.717 41.667 0.00 0.00 32.98 2.24
6943 9362 6.860790 TGTCATGGTGTAACTAACCTCATA 57.139 37.500 0.00 0.00 38.60 2.15
6975 9394 3.387699 TGGTGTTGAGTTCATCTGACTGA 59.612 43.478 0.00 0.00 0.00 3.41
7009 9428 4.256920 CGTTCCTCTTCATGTCTGGAATT 58.743 43.478 12.50 0.00 38.77 2.17
7010 9429 5.419542 CGTTCCTCTTCATGTCTGGAATTA 58.580 41.667 12.50 0.00 38.77 1.40
7014 9433 9.050601 GTTCCTCTTCATGTCTGGAATTAATAG 57.949 37.037 12.50 0.00 38.77 1.73
7022 9441 5.815581 TGTCTGGAATTAATAGTGCAACCT 58.184 37.500 0.00 0.00 37.80 3.50
7051 9470 9.260002 CAAATTAACTACTGCCAGAATTGTTTT 57.740 29.630 0.00 0.00 0.00 2.43
7151 9692 8.023021 ACTCTCAAGTGATATGCCACTATTTA 57.977 34.615 0.00 0.00 45.82 1.40
7152 9693 8.147058 ACTCTCAAGTGATATGCCACTATTTAG 58.853 37.037 0.00 0.00 45.82 1.85
7153 9694 8.023021 TCTCAAGTGATATGCCACTATTTAGT 57.977 34.615 0.00 0.00 45.82 2.24
7154 9695 9.143155 TCTCAAGTGATATGCCACTATTTAGTA 57.857 33.333 0.00 0.00 45.82 1.82
7155 9696 9.197694 CTCAAGTGATATGCCACTATTTAGTAC 57.802 37.037 0.00 0.00 45.82 2.73
7156 9697 8.148351 TCAAGTGATATGCCACTATTTAGTACC 58.852 37.037 0.00 0.00 45.82 3.34
7157 9698 7.857404 AGTGATATGCCACTATTTAGTACCT 57.143 36.000 0.00 0.00 44.82 3.08
7158 9699 7.897864 AGTGATATGCCACTATTTAGTACCTC 58.102 38.462 0.00 0.00 44.82 3.85
7159 9700 7.038941 AGTGATATGCCACTATTTAGTACCTCC 60.039 40.741 0.00 0.00 44.82 4.30
7160 9701 7.016914 TGATATGCCACTATTTAGTACCTCCT 58.983 38.462 0.00 0.00 34.13 3.69
7161 9702 7.512746 TGATATGCCACTATTTAGTACCTCCTT 59.487 37.037 0.00 0.00 34.13 3.36
7162 9703 6.576778 ATGCCACTATTTAGTACCTCCTTT 57.423 37.500 0.00 0.00 34.13 3.11
7163 9704 5.741011 TGCCACTATTTAGTACCTCCTTTG 58.259 41.667 0.00 0.00 34.13 2.77
7164 9705 5.249852 TGCCACTATTTAGTACCTCCTTTGT 59.750 40.000 0.00 0.00 34.13 2.83
7165 9706 6.178324 GCCACTATTTAGTACCTCCTTTGTT 58.822 40.000 0.00 0.00 34.13 2.83
7166 9707 6.315642 GCCACTATTTAGTACCTCCTTTGTTC 59.684 42.308 0.00 0.00 34.13 3.18
7167 9708 6.822170 CCACTATTTAGTACCTCCTTTGTTCC 59.178 42.308 0.00 0.00 34.13 3.62
7168 9709 7.391620 CACTATTTAGTACCTCCTTTGTTCCA 58.608 38.462 0.00 0.00 34.13 3.53
7169 9710 7.881232 CACTATTTAGTACCTCCTTTGTTCCAA 59.119 37.037 0.00 0.00 34.13 3.53
7170 9711 8.442374 ACTATTTAGTACCTCCTTTGTTCCAAA 58.558 33.333 0.00 0.00 34.13 3.28
7171 9712 9.462606 CTATTTAGTACCTCCTTTGTTCCAAAT 57.537 33.333 0.00 0.00 0.00 2.32
7173 9714 9.816787 ATTTAGTACCTCCTTTGTTCCAAATAA 57.183 29.630 0.00 0.00 0.00 1.40
7174 9715 8.857694 TTAGTACCTCCTTTGTTCCAAATAAG 57.142 34.615 0.00 0.00 0.00 1.73
7175 9716 6.849151 AGTACCTCCTTTGTTCCAAATAAGT 58.151 36.000 0.00 0.00 0.00 2.24
7176 9717 6.715264 AGTACCTCCTTTGTTCCAAATAAGTG 59.285 38.462 0.00 0.00 0.00 3.16
7177 9718 5.701224 ACCTCCTTTGTTCCAAATAAGTGA 58.299 37.500 0.00 0.00 0.00 3.41
7178 9719 5.535030 ACCTCCTTTGTTCCAAATAAGTGAC 59.465 40.000 0.00 0.00 0.00 3.67
7179 9720 5.334879 CCTCCTTTGTTCCAAATAAGTGACG 60.335 44.000 0.00 0.00 0.00 4.35
7180 9721 5.127491 TCCTTTGTTCCAAATAAGTGACGT 58.873 37.500 0.00 0.00 0.00 4.34
7181 9722 5.008217 TCCTTTGTTCCAAATAAGTGACGTG 59.992 40.000 0.00 0.00 0.00 4.49
7182 9723 3.889196 TGTTCCAAATAAGTGACGTGC 57.111 42.857 0.00 0.00 0.00 5.34
7183 9724 3.472652 TGTTCCAAATAAGTGACGTGCT 58.527 40.909 0.00 0.00 0.00 4.40
7184 9725 3.880490 TGTTCCAAATAAGTGACGTGCTT 59.120 39.130 0.00 0.00 0.00 3.91
7185 9726 4.336993 TGTTCCAAATAAGTGACGTGCTTT 59.663 37.500 0.00 0.00 0.00 3.51
7186 9727 5.527951 TGTTCCAAATAAGTGACGTGCTTTA 59.472 36.000 0.00 0.00 0.00 1.85
7187 9728 5.856126 TCCAAATAAGTGACGTGCTTTAG 57.144 39.130 0.00 0.00 0.00 1.85
7188 9729 5.302360 TCCAAATAAGTGACGTGCTTTAGT 58.698 37.500 0.00 0.00 0.00 2.24
7189 9730 5.761234 TCCAAATAAGTGACGTGCTTTAGTT 59.239 36.000 0.00 0.00 0.00 2.24
7190 9731 6.073440 TCCAAATAAGTGACGTGCTTTAGTTC 60.073 38.462 0.00 0.00 0.00 3.01
7191 9732 6.293190 CCAAATAAGTGACGTGCTTTAGTTCA 60.293 38.462 0.00 0.00 0.00 3.18
7192 9733 6.854496 AATAAGTGACGTGCTTTAGTTCAA 57.146 33.333 0.00 0.00 0.00 2.69
7193 9734 6.854496 ATAAGTGACGTGCTTTAGTTCAAA 57.146 33.333 0.00 0.00 0.00 2.69
7194 9735 5.751243 AAGTGACGTGCTTTAGTTCAAAT 57.249 34.783 0.00 0.00 0.00 2.32
7195 9736 5.751243 AGTGACGTGCTTTAGTTCAAATT 57.249 34.783 0.00 0.00 0.00 1.82
7196 9737 5.510671 AGTGACGTGCTTTAGTTCAAATTG 58.489 37.500 0.00 0.00 0.00 2.32
7197 9738 5.065988 AGTGACGTGCTTTAGTTCAAATTGT 59.934 36.000 0.00 0.00 0.00 2.71
7198 9739 5.741982 GTGACGTGCTTTAGTTCAAATTGTT 59.258 36.000 0.00 0.00 0.00 2.83
7199 9740 6.252655 GTGACGTGCTTTAGTTCAAATTGTTT 59.747 34.615 0.00 0.00 0.00 2.83
7200 9741 6.252441 TGACGTGCTTTAGTTCAAATTGTTTG 59.748 34.615 0.00 0.00 41.96 2.93
7231 9772 9.645128 AAATCATGACAGTTATTATGGAATGGA 57.355 29.630 0.00 0.00 0.00 3.41
7232 9773 8.859236 ATCATGACAGTTATTATGGAATGGAG 57.141 34.615 0.00 0.00 0.00 3.86
7233 9774 7.226441 TCATGACAGTTATTATGGAATGGAGG 58.774 38.462 0.00 0.00 0.00 4.30
7234 9775 5.940617 TGACAGTTATTATGGAATGGAGGG 58.059 41.667 0.00 0.00 0.00 4.30
7235 9776 5.669904 TGACAGTTATTATGGAATGGAGGGA 59.330 40.000 0.00 0.00 0.00 4.20
7278 9819 6.265196 AGCAGTCATAGTCATTTTGTTTTGGA 59.735 34.615 0.00 0.00 0.00 3.53
7364 9905 7.345653 TCAGGTGAAGTTGAGATTATATCAGGT 59.654 37.037 0.00 0.00 0.00 4.00
7411 9952 9.423061 ACTGCTAAAATAACAAATGGTCATTTC 57.577 29.630 6.01 0.00 38.84 2.17
7421 9962 0.964700 TGGTCATTTCATTTGGCGCA 59.035 45.000 10.83 0.00 0.00 6.09
7422 9963 1.067706 TGGTCATTTCATTTGGCGCAG 60.068 47.619 10.83 0.00 0.00 5.18
7423 9964 1.067635 GGTCATTTCATTTGGCGCAGT 60.068 47.619 10.83 0.00 0.00 4.40
7467 10016 7.262772 AGGTGAATGATATGTGCTTTTGATTG 58.737 34.615 0.00 0.00 0.00 2.67
7468 10017 7.123098 AGGTGAATGATATGTGCTTTTGATTGA 59.877 33.333 0.00 0.00 0.00 2.57
7469 10018 7.221452 GGTGAATGATATGTGCTTTTGATTGAC 59.779 37.037 0.00 0.00 0.00 3.18
7478 10027 6.058833 TGTGCTTTTGATTGACTACTAACCA 58.941 36.000 0.00 0.00 0.00 3.67
7500 10049 8.848474 ACCATGGTTTCTATAATAGCATGTAC 57.152 34.615 13.00 0.00 42.94 2.90
7501 10050 8.660435 ACCATGGTTTCTATAATAGCATGTACT 58.340 33.333 13.00 0.00 42.94 2.73
7512 10061 8.885693 ATAATAGCATGTACTATGTCAGGAGA 57.114 34.615 0.00 0.00 33.12 3.71
7513 10062 6.832520 ATAGCATGTACTATGTCAGGAGAG 57.167 41.667 0.00 0.00 31.57 3.20
7514 10063 4.541705 AGCATGTACTATGTCAGGAGAGT 58.458 43.478 0.00 0.00 0.00 3.24
7515 10064 4.959210 AGCATGTACTATGTCAGGAGAGTT 59.041 41.667 0.00 0.00 0.00 3.01
7560 10116 8.078596 GTCTGCAGTCTGTTCAGAAATAATTTT 58.921 33.333 14.67 0.00 38.42 1.82
7561 10117 8.632679 TCTGCAGTCTGTTCAGAAATAATTTTT 58.367 29.630 14.67 0.00 34.30 1.94
7562 10118 9.897744 CTGCAGTCTGTTCAGAAATAATTTTTA 57.102 29.630 5.25 0.00 0.00 1.52
7608 10164 4.286291 ACTGACGATAAACCCCTTTCTCTT 59.714 41.667 0.00 0.00 0.00 2.85
7611 10167 3.585732 ACGATAAACCCCTTTCTCTTCCA 59.414 43.478 0.00 0.00 0.00 3.53
7615 10171 1.140772 ACCCCTTTCTCTTCCACCCC 61.141 60.000 0.00 0.00 0.00 4.95
7619 10175 2.853077 CCCTTTCTCTTCCACCCCTAAT 59.147 50.000 0.00 0.00 0.00 1.73
7647 10207 8.616076 CATCTGAAGTACTCTGTTTCTTGTTTT 58.384 33.333 0.00 0.00 0.00 2.43
7654 10214 4.584743 ACTCTGTTTCTTGTTTTCCCATCC 59.415 41.667 0.00 0.00 0.00 3.51
7661 10221 4.686891 TCTTGTTTTCCCATCCCATGATT 58.313 39.130 0.00 0.00 0.00 2.57
7666 10226 5.129155 TGTTTTCCCATCCCATGATTGAATC 59.871 40.000 0.00 0.00 0.00 2.52
7667 10227 4.539596 TTCCCATCCCATGATTGAATCA 57.460 40.909 10.65 10.65 44.55 2.57
7668 10228 4.539596 TCCCATCCCATGATTGAATCAA 57.460 40.909 12.36 0.00 43.50 2.57
7669 10229 5.082633 TCCCATCCCATGATTGAATCAAT 57.917 39.130 12.36 8.39 43.50 2.57
7670 10230 4.836175 TCCCATCCCATGATTGAATCAATG 59.164 41.667 13.82 10.66 43.50 2.82
7671 10231 4.020573 CCCATCCCATGATTGAATCAATGG 60.021 45.833 21.48 21.48 43.50 3.16
7694 10254 9.927081 ATGGTTCAGGAACTAGAAAAATATGAT 57.073 29.630 11.56 0.00 40.94 2.45
7697 10257 8.841300 GTTCAGGAACTAGAAAAATATGATCCC 58.159 37.037 0.00 0.00 36.02 3.85
7707 10267 7.875971 AGAAAAATATGATCCCGTATTCTTGC 58.124 34.615 0.00 0.00 34.34 4.01
7750 10310 5.337788 TGGAATATGGGGTTAAAAAGCACT 58.662 37.500 0.00 0.00 32.37 4.40
7751 10311 5.186797 TGGAATATGGGGTTAAAAAGCACTG 59.813 40.000 0.00 0.00 32.37 3.66
7762 10322 6.793680 GGTTAAAAAGCACTGTATGTTCGTAC 59.206 38.462 0.00 0.00 0.00 3.67
7763 10323 5.352643 AAAAAGCACTGTATGTTCGTACC 57.647 39.130 0.00 0.00 0.00 3.34
7767 10327 4.575885 AGCACTGTATGTTCGTACCATTT 58.424 39.130 0.00 0.00 0.00 2.32
7770 10330 5.808540 GCACTGTATGTTCGTACCATTTCTA 59.191 40.000 0.60 0.00 0.00 2.10
7774 10334 7.544566 ACTGTATGTTCGTACCATTTCTAAGTG 59.455 37.037 0.60 0.00 0.00 3.16
7789 10349 6.801539 TTCTAAGTGTAACATGCCTTCTTG 57.198 37.500 0.00 0.00 41.43 3.02
7797 10357 6.595716 GTGTAACATGCCTTCTTGTCTTCTAT 59.404 38.462 0.00 0.00 36.32 1.98
7825 10385 9.331282 AGTATAGATTTGGTGTTCTAAATCAGC 57.669 33.333 15.43 0.00 46.66 4.26
7826 10386 5.551760 AGATTTGGTGTTCTAAATCAGCG 57.448 39.130 15.43 0.00 46.66 5.18
7827 10387 5.245531 AGATTTGGTGTTCTAAATCAGCGA 58.754 37.500 15.43 0.00 46.66 4.93
7828 10388 4.742438 TTTGGTGTTCTAAATCAGCGAC 57.258 40.909 0.00 0.00 35.23 5.19
7830 10390 3.734463 TGGTGTTCTAAATCAGCGACAA 58.266 40.909 0.00 0.00 35.23 3.18
7832 10392 4.759693 TGGTGTTCTAAATCAGCGACAATT 59.240 37.500 0.00 0.00 35.23 2.32
7833 10393 5.935206 TGGTGTTCTAAATCAGCGACAATTA 59.065 36.000 0.00 0.00 35.23 1.40
7834 10394 6.428465 TGGTGTTCTAAATCAGCGACAATTAA 59.572 34.615 0.00 0.00 35.23 1.40
7835 10395 7.120579 TGGTGTTCTAAATCAGCGACAATTAAT 59.879 33.333 0.00 0.00 35.23 1.40
7836 10396 8.609176 GGTGTTCTAAATCAGCGACAATTAATA 58.391 33.333 0.00 0.00 0.00 0.98
7839 10399 9.599322 GTTCTAAATCAGCGACAATTAATATGG 57.401 33.333 0.00 0.00 0.00 2.74
7840 10400 9.554395 TTCTAAATCAGCGACAATTAATATGGA 57.446 29.630 0.00 0.00 0.00 3.41
7841 10401 9.725019 TCTAAATCAGCGACAATTAATATGGAT 57.275 29.630 0.00 0.00 0.00 3.41
7842 10402 9.979270 CTAAATCAGCGACAATTAATATGGATC 57.021 33.333 0.00 0.00 0.00 3.36
7843 10403 6.653273 ATCAGCGACAATTAATATGGATCG 57.347 37.500 0.00 0.00 0.00 3.69
7844 10404 4.929211 TCAGCGACAATTAATATGGATCGG 59.071 41.667 0.00 0.00 0.00 4.18
7845 10405 4.929211 CAGCGACAATTAATATGGATCGGA 59.071 41.667 0.00 0.00 0.00 4.55
7846 10406 5.062683 CAGCGACAATTAATATGGATCGGAG 59.937 44.000 0.00 0.00 0.00 4.63
7847 10407 4.330074 GCGACAATTAATATGGATCGGAGG 59.670 45.833 0.00 0.00 0.00 4.30
7848 10408 4.870426 CGACAATTAATATGGATCGGAGGG 59.130 45.833 0.00 0.00 0.00 4.30
7849 10409 5.337250 CGACAATTAATATGGATCGGAGGGA 60.337 44.000 0.00 0.00 0.00 4.20
7850 10410 6.054860 ACAATTAATATGGATCGGAGGGAG 57.945 41.667 0.00 0.00 0.00 4.30
7851 10411 5.548056 ACAATTAATATGGATCGGAGGGAGT 59.452 40.000 0.00 0.00 0.00 3.85
7867 10427 2.972713 GGGAGTAGCATACAATCCTGGA 59.027 50.000 0.00 0.00 46.26 3.86
7871 10431 6.166982 GGAGTAGCATACAATCCTGGAATAC 58.833 44.000 0.00 0.00 46.26 1.89
7878 10438 6.072286 GCATACAATCCTGGAATACATTCTGG 60.072 42.308 0.00 5.40 37.00 3.86
7897 10457 3.691575 TGGAATTTCCATTCGGTTGCTA 58.308 40.909 14.24 0.00 42.67 3.49
7911 10472 4.097714 CGGTTGCTATAACATGCTTTGTG 58.902 43.478 0.00 0.00 38.99 3.33
7953 10514 8.896320 TTTGCTATACTGTTTTAGTGAAGACA 57.104 30.769 0.00 0.00 40.65 3.41
7954 10515 8.896320 TTGCTATACTGTTTTAGTGAAGACAA 57.104 30.769 0.00 0.00 40.65 3.18
7969 10530 4.081087 TGAAGACAAGTATAAGCTGGGACC 60.081 45.833 0.00 0.00 0.00 4.46
7971 10532 2.504175 GACAAGTATAAGCTGGGACCCA 59.496 50.000 14.08 14.08 0.00 4.51
7975 10536 4.214993 AGTATAAGCTGGGACCCACTAT 57.785 45.455 9.95 9.42 0.00 2.12
7989 10550 6.473758 GGACCCACTATTGATAAATACTCCC 58.526 44.000 0.00 0.00 0.00 4.30
7994 10555 7.386851 CCACTATTGATAAATACTCCCGATGT 58.613 38.462 0.00 0.00 0.00 3.06
8008 10569 2.628178 CCCGATGTAGCCTGAAGACATA 59.372 50.000 0.00 0.00 33.99 2.29
8009 10570 3.553096 CCCGATGTAGCCTGAAGACATAC 60.553 52.174 0.00 0.00 33.99 2.39
8010 10571 3.300857 CGATGTAGCCTGAAGACATACG 58.699 50.000 0.00 0.00 33.99 3.06
8011 10572 3.243101 CGATGTAGCCTGAAGACATACGT 60.243 47.826 0.00 0.00 33.99 3.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 35 0.553333 GAAAGAGGGGATGAAGGGGG 59.447 60.000 0.00 0.00 0.00 5.40
39 44 2.052690 CGCTCCGAGAAAGAGGGGA 61.053 63.158 0.00 0.00 39.83 4.81
52 57 3.621394 GACGCTCGCATTCGCTCC 61.621 66.667 0.00 0.00 35.30 4.70
53 58 2.572448 GAGACGCTCGCATTCGCTC 61.572 63.158 0.00 0.00 35.30 5.03
54 59 2.580867 GAGACGCTCGCATTCGCT 60.581 61.111 0.00 0.00 35.30 4.93
55 60 3.965701 CGAGACGCTCGCATTCGC 61.966 66.667 14.50 0.00 46.75 4.70
69 74 4.279671 AGTGAGATCCAGTTATTAGCCGAG 59.720 45.833 0.00 0.00 0.00 4.63
70 75 4.215908 AGTGAGATCCAGTTATTAGCCGA 58.784 43.478 0.00 0.00 0.00 5.54
127 132 3.168528 TAATGGCGGAGGGGGAGC 61.169 66.667 0.00 0.00 0.00 4.70
128 133 2.819284 GGTAATGGCGGAGGGGGAG 61.819 68.421 0.00 0.00 0.00 4.30
129 134 2.770904 GGTAATGGCGGAGGGGGA 60.771 66.667 0.00 0.00 0.00 4.81
130 135 3.886001 GGGTAATGGCGGAGGGGG 61.886 72.222 0.00 0.00 0.00 5.40
131 136 3.093835 TGGGTAATGGCGGAGGGG 61.094 66.667 0.00 0.00 0.00 4.79
168 173 1.128692 CTGAAATCTGGACGGCGAAAC 59.871 52.381 16.62 3.27 0.00 2.78
248 256 4.807304 GCATCCTAAATGCCAAAGTTGATG 59.193 41.667 0.00 0.00 39.01 3.07
249 257 4.713321 AGCATCCTAAATGCCAAAGTTGAT 59.287 37.500 6.40 0.00 45.59 2.57
408 421 1.888512 CCGCCCTTTGATTATGGATGG 59.111 52.381 0.00 0.00 0.00 3.51
409 422 1.888512 CCCGCCCTTTGATTATGGATG 59.111 52.381 0.00 0.00 0.00 3.51
412 425 2.504367 CTACCCGCCCTTTGATTATGG 58.496 52.381 0.00 0.00 0.00 2.74
496 509 5.470047 AAAGAGGTATGAAGACACGAGTT 57.530 39.130 0.00 0.00 0.00 3.01
497 510 5.711036 AGTAAAGAGGTATGAAGACACGAGT 59.289 40.000 0.00 0.00 0.00 4.18
514 527 6.796705 GCTACAGGCTTAAACAAGTAAAGA 57.203 37.500 0.00 0.00 38.06 2.52
532 545 4.716784 AGTATGTCCAATCCAAGAGCTACA 59.283 41.667 0.00 0.00 0.00 2.74
561 574 4.040461 ACCTAGAGCTTACTTGCTGTTGAA 59.960 41.667 0.00 0.00 44.17 2.69
570 583 5.308237 CCATTCCCATACCTAGAGCTTACTT 59.692 44.000 0.00 0.00 0.00 2.24
618 634 2.224843 TGACATGTGGCCAAGATCAAGT 60.225 45.455 7.24 3.93 0.00 3.16
642 658 9.760660 GTATTACTTATGCAGAAAGAACAACAG 57.239 33.333 16.26 0.00 0.00 3.16
682 699 7.490055 CAAATTAAGTTTGCACACGAATGTAC 58.510 34.615 6.86 0.00 40.62 2.90
683 700 7.616103 CAAATTAAGTTTGCACACGAATGTA 57.384 32.000 6.86 0.00 40.62 2.29
684 701 6.509317 CAAATTAAGTTTGCACACGAATGT 57.491 33.333 6.86 0.40 40.62 2.71
709 726 2.024414 GCAATTAGAGGGTCGGCAAAT 58.976 47.619 0.00 0.00 0.00 2.32
716 733 1.429148 CCGCGTGCAATTAGAGGGTC 61.429 60.000 4.92 0.00 0.00 4.46
717 734 1.449601 CCGCGTGCAATTAGAGGGT 60.450 57.895 4.92 0.00 0.00 4.34
720 737 1.083806 TGCTCCGCGTGCAATTAGAG 61.084 55.000 19.16 10.37 37.51 2.43
752 769 0.109342 ACCACCAAGCTGAAGACCAG 59.891 55.000 0.00 0.00 45.67 4.00
882 899 7.436673 GTCTGTGGACACTTAATATCATCTGTC 59.563 40.741 3.91 0.00 41.75 3.51
952 971 7.360101 CGTTCAAAGGATAAGAAGGTGTTAGTG 60.360 40.741 0.00 0.00 0.00 2.74
977 996 2.276166 TGTGATCATCAAGCACCTGCG 61.276 52.381 0.00 0.00 43.80 5.18
999 1018 3.374988 TGAGCGTGGAATTTGATGACATC 59.625 43.478 8.59 8.59 0.00 3.06
1011 1030 1.344438 AGTGATTCTGTGAGCGTGGAA 59.656 47.619 0.00 0.00 0.00 3.53
1166 1185 0.033699 GGGAAGCTCCTTGAATGCCT 60.034 55.000 0.00 0.00 36.57 4.75
1212 1231 1.625818 ACCCTGACTTCTGTGATGTCC 59.374 52.381 9.90 0.00 36.36 4.02
1313 1332 5.716228 ACCAATTGAACTGCATCTTTATCCA 59.284 36.000 7.12 0.00 0.00 3.41
1326 1345 1.425066 TCCTCCTGCACCAATTGAACT 59.575 47.619 7.12 0.00 0.00 3.01
1334 1353 0.321564 CGAATTGTCCTCCTGCACCA 60.322 55.000 0.00 0.00 0.00 4.17
1337 1356 0.250234 CCTCGAATTGTCCTCCTGCA 59.750 55.000 0.00 0.00 0.00 4.41
1446 1465 1.787155 GAATCGGCAGTAGCATGTACG 59.213 52.381 0.00 0.00 44.61 3.67
1473 1492 0.617820 ACTCAGGTAGGCCGTCCAAT 60.618 55.000 18.73 0.00 40.50 3.16
1506 1525 0.541764 GAGTGAACCAATGGCCCCAA 60.542 55.000 0.00 0.00 0.00 4.12
1584 1603 2.568062 ACGGTACACAACACCATATCCA 59.432 45.455 0.00 0.00 35.67 3.41
1602 1621 2.287788 GCCATTTGATAATCTGCCACGG 60.288 50.000 0.00 0.00 0.00 4.94
1697 1716 7.175104 AGTCAACACAATAAACCCATAGACAT 58.825 34.615 0.00 0.00 0.00 3.06
1799 1818 0.807667 CCACTCTGAATTCCCGCTCG 60.808 60.000 2.27 0.00 0.00 5.03
1947 1969 8.244113 GCTAAAACAATAGAAACATAACAGGCT 58.756 33.333 0.00 0.00 0.00 4.58
2071 2093 0.400213 ACAATTCTCCGTGGAGCCAA 59.600 50.000 11.17 1.90 41.71 4.52
2153 2175 4.156190 TGAGTTTAGTGAAGGAGCTACTCG 59.844 45.833 0.00 0.00 0.00 4.18
2210 2430 3.061295 GCACACTATCACGTGATGAACAG 59.939 47.826 35.46 27.09 41.93 3.16
2222 2442 4.535526 TGTTAGCTCTTGCACACTATCA 57.464 40.909 0.00 0.00 42.74 2.15
2284 2504 4.342092 AGTTAAACCCAGATGCCATTATGC 59.658 41.667 0.00 0.00 0.00 3.14
2286 2506 6.655003 CGATAGTTAAACCCAGATGCCATTAT 59.345 38.462 0.00 0.00 0.00 1.28
2579 2801 5.138125 TCAAATTGATGTTTCCAAGAGCC 57.862 39.130 0.00 0.00 0.00 4.70
2836 3058 9.500785 TGGATAAATTTTGGAGGAAATGAAAAC 57.499 29.630 0.00 0.00 30.06 2.43
2879 3101 8.630054 AAACTAATTGTTAGCATCCACAACTA 57.370 30.769 0.00 0.00 38.03 2.24
3365 5397 3.201708 CCTGATCCATCCTTGGTCTCTTT 59.798 47.826 0.00 0.00 44.06 2.52
3603 5635 0.815615 GCCAAATGGAGCCGGTAGAG 60.816 60.000 1.90 0.00 37.39 2.43
3611 5643 2.171448 TCCTCTCTAAGCCAAATGGAGC 59.829 50.000 2.98 0.00 37.39 4.70
3872 5904 6.267699 CCAAAAGATGTTTAGGGTTTCCTTCT 59.732 38.462 0.00 0.00 41.56 2.85
4155 6190 6.561614 ACTCTTGGTGTGTACAATACGATAG 58.438 40.000 0.00 1.88 46.19 2.08
4156 6191 6.519679 ACTCTTGGTGTGTACAATACGATA 57.480 37.500 0.00 0.00 0.00 2.92
4157 6192 5.401531 ACTCTTGGTGTGTACAATACGAT 57.598 39.130 0.00 0.00 0.00 3.73
4234 6270 2.031258 TTCAGACGCCAGAAACACAA 57.969 45.000 0.00 0.00 0.00 3.33
4291 6327 2.432444 TGCAACTAAAATGGACCGGAG 58.568 47.619 9.46 0.00 0.00 4.63
4292 6328 2.570415 TGCAACTAAAATGGACCGGA 57.430 45.000 9.46 0.00 0.00 5.14
4293 6329 6.262273 ACTTATATGCAACTAAAATGGACCGG 59.738 38.462 0.00 0.00 0.00 5.28
4294 6330 7.259290 ACTTATATGCAACTAAAATGGACCG 57.741 36.000 0.00 0.00 0.00 4.79
4295 6331 9.869757 AAAACTTATATGCAACTAAAATGGACC 57.130 29.630 0.00 0.00 0.00 4.46
4305 6341 9.463443 GACTTCAAACAAAACTTATATGCAACT 57.537 29.630 0.00 0.00 0.00 3.16
4306 6342 9.243637 TGACTTCAAACAAAACTTATATGCAAC 57.756 29.630 0.00 0.00 0.00 4.17
4307 6343 9.809096 TTGACTTCAAACAAAACTTATATGCAA 57.191 25.926 0.00 0.00 32.11 4.08
4308 6344 9.809096 TTTGACTTCAAACAAAACTTATATGCA 57.191 25.926 0.07 0.00 40.55 3.96
4313 6349 8.947055 ATGCTTTGACTTCAAACAAAACTTAT 57.053 26.923 0.07 0.00 40.55 1.73
4314 6350 8.250332 AGATGCTTTGACTTCAAACAAAACTTA 58.750 29.630 0.07 0.00 40.55 2.24
4315 6351 7.099120 AGATGCTTTGACTTCAAACAAAACTT 58.901 30.769 0.07 0.00 40.55 2.66
4316 6352 6.633856 AGATGCTTTGACTTCAAACAAAACT 58.366 32.000 0.07 4.36 40.55 2.66
4317 6353 6.753744 AGAGATGCTTTGACTTCAAACAAAAC 59.246 34.615 0.07 0.00 40.55 2.43
4318 6354 6.866480 AGAGATGCTTTGACTTCAAACAAAA 58.134 32.000 0.07 0.00 40.55 2.44
4319 6355 6.455360 AGAGATGCTTTGACTTCAAACAAA 57.545 33.333 0.07 0.00 40.55 2.83
4320 6356 6.767902 AGTAGAGATGCTTTGACTTCAAACAA 59.232 34.615 0.07 0.00 40.55 2.83
4321 6357 6.291377 AGTAGAGATGCTTTGACTTCAAACA 58.709 36.000 0.07 5.22 40.55 2.83
4322 6358 6.793492 AGTAGAGATGCTTTGACTTCAAAC 57.207 37.500 0.07 0.14 40.55 2.93
4323 6359 7.807977 AAAGTAGAGATGCTTTGACTTCAAA 57.192 32.000 4.39 4.39 42.90 2.69
4332 6368 4.537135 TCGGTCAAAGTAGAGATGCTTT 57.463 40.909 0.00 0.00 35.55 3.51
4333 6369 4.537135 TTCGGTCAAAGTAGAGATGCTT 57.463 40.909 0.00 0.00 0.00 3.91
4334 6370 4.744795 ATTCGGTCAAAGTAGAGATGCT 57.255 40.909 0.00 0.00 0.00 3.79
4335 6371 5.803020 AAATTCGGTCAAAGTAGAGATGC 57.197 39.130 0.00 0.00 0.00 3.91
4363 6399 9.915629 TTGGCATCGTAAATGTTAATACTTTTT 57.084 25.926 0.00 0.00 34.56 1.94
4364 6400 9.915629 TTTGGCATCGTAAATGTTAATACTTTT 57.084 25.926 0.00 0.00 36.15 2.27
4366 6402 9.730420 GATTTGGCATCGTAAATGTTAATACTT 57.270 29.630 0.00 0.00 0.00 2.24
4367 6403 8.898761 TGATTTGGCATCGTAAATGTTAATACT 58.101 29.630 0.00 0.00 0.00 2.12
4368 6404 9.509855 TTGATTTGGCATCGTAAATGTTAATAC 57.490 29.630 0.00 0.00 0.00 1.89
4370 6406 9.598517 AATTGATTTGGCATCGTAAATGTTAAT 57.401 25.926 0.00 0.00 0.00 1.40
4371 6407 8.994429 AATTGATTTGGCATCGTAAATGTTAA 57.006 26.923 0.00 0.00 0.00 2.01
4372 6408 8.994429 AAATTGATTTGGCATCGTAAATGTTA 57.006 26.923 0.00 0.00 0.00 2.41
4373 6409 7.903995 AAATTGATTTGGCATCGTAAATGTT 57.096 28.000 0.00 0.00 0.00 2.71
4374 6410 7.741198 CAAAATTGATTTGGCATCGTAAATGT 58.259 30.769 0.00 0.00 43.85 2.71
4424 6460 9.919416 CAACCATACCAAATATATATCCCATGA 57.081 33.333 0.00 0.00 0.00 3.07
4425 6461 9.919416 TCAACCATACCAAATATATATCCCATG 57.081 33.333 0.00 0.00 0.00 3.66
4484 6520 6.202516 TGGGTCAAGTCAAACTTTGTAAAG 57.797 37.500 2.94 2.94 36.03 1.85
4485 6521 6.591750 TTGGGTCAAGTCAAACTTTGTAAA 57.408 33.333 1.44 0.00 36.03 2.01
4486 6522 6.591750 TTTGGGTCAAGTCAAACTTTGTAA 57.408 33.333 1.44 0.00 36.03 2.41
4487 6523 6.605594 AGATTTGGGTCAAGTCAAACTTTGTA 59.394 34.615 1.44 0.00 36.03 2.41
4488 6524 5.422012 AGATTTGGGTCAAGTCAAACTTTGT 59.578 36.000 1.44 0.00 36.03 2.83
4489 6525 5.906073 AGATTTGGGTCAAGTCAAACTTTG 58.094 37.500 6.06 0.00 36.03 2.77
4490 6526 7.654022 TTAGATTTGGGTCAAGTCAAACTTT 57.346 32.000 6.06 0.00 36.03 2.66
4491 6527 7.839680 ATTAGATTTGGGTCAAGTCAAACTT 57.160 32.000 6.06 0.00 39.39 2.66
4492 6528 8.960591 CATATTAGATTTGGGTCAAGTCAAACT 58.039 33.333 6.06 0.00 35.97 2.66
4493 6529 7.702348 GCATATTAGATTTGGGTCAAGTCAAAC 59.298 37.037 6.06 0.00 35.97 2.93
4494 6530 7.415095 CGCATATTAGATTTGGGTCAAGTCAAA 60.415 37.037 6.06 0.00 33.48 2.69
4495 6531 6.038161 CGCATATTAGATTTGGGTCAAGTCAA 59.962 38.462 6.06 0.58 33.48 3.18
4496 6532 5.527214 CGCATATTAGATTTGGGTCAAGTCA 59.473 40.000 6.06 0.00 33.48 3.41
4497 6533 5.049405 CCGCATATTAGATTTGGGTCAAGTC 60.049 44.000 0.00 0.00 31.63 3.01
4498 6534 4.821805 CCGCATATTAGATTTGGGTCAAGT 59.178 41.667 0.00 0.00 0.00 3.16
4499 6535 5.063204 TCCGCATATTAGATTTGGGTCAAG 58.937 41.667 0.00 0.00 0.00 3.02
4500 6536 5.042463 TCCGCATATTAGATTTGGGTCAA 57.958 39.130 0.00 0.00 0.00 3.18
4501 6537 4.102524 ACTCCGCATATTAGATTTGGGTCA 59.897 41.667 0.00 0.00 0.00 4.02
4502 6538 4.642429 ACTCCGCATATTAGATTTGGGTC 58.358 43.478 0.00 0.00 0.00 4.46
4503 6539 4.706842 ACTCCGCATATTAGATTTGGGT 57.293 40.909 0.00 0.00 0.00 4.51
4504 6540 7.504924 TTTTACTCCGCATATTAGATTTGGG 57.495 36.000 0.00 0.00 0.00 4.12
4505 6541 8.076178 CCTTTTTACTCCGCATATTAGATTTGG 58.924 37.037 0.00 0.00 0.00 3.28
4506 6542 8.836413 TCCTTTTTACTCCGCATATTAGATTTG 58.164 33.333 0.00 0.00 0.00 2.32
4507 6543 8.837389 GTCCTTTTTACTCCGCATATTAGATTT 58.163 33.333 0.00 0.00 0.00 2.17
4508 6544 7.444487 GGTCCTTTTTACTCCGCATATTAGATT 59.556 37.037 0.00 0.00 0.00 2.40
4509 6545 6.935208 GGTCCTTTTTACTCCGCATATTAGAT 59.065 38.462 0.00 0.00 0.00 1.98
4510 6546 6.285990 GGTCCTTTTTACTCCGCATATTAGA 58.714 40.000 0.00 0.00 0.00 2.10
4511 6547 5.176958 CGGTCCTTTTTACTCCGCATATTAG 59.823 44.000 0.00 0.00 35.01 1.73
4512 6548 5.051816 CGGTCCTTTTTACTCCGCATATTA 58.948 41.667 0.00 0.00 35.01 0.98
4513 6549 3.875134 CGGTCCTTTTTACTCCGCATATT 59.125 43.478 0.00 0.00 35.01 1.28
4514 6550 3.463944 CGGTCCTTTTTACTCCGCATAT 58.536 45.455 0.00 0.00 35.01 1.78
4515 6551 2.419021 CCGGTCCTTTTTACTCCGCATA 60.419 50.000 0.00 0.00 39.87 3.14
4516 6552 1.677820 CCGGTCCTTTTTACTCCGCAT 60.678 52.381 0.00 0.00 39.87 4.73
4517 6553 0.320946 CCGGTCCTTTTTACTCCGCA 60.321 55.000 0.00 0.00 39.87 5.69
4518 6554 0.037046 TCCGGTCCTTTTTACTCCGC 60.037 55.000 0.00 0.00 39.87 5.54
4519 6555 1.405121 CCTCCGGTCCTTTTTACTCCG 60.405 57.143 0.00 0.00 40.72 4.63
4520 6556 1.065636 CCCTCCGGTCCTTTTTACTCC 60.066 57.143 0.00 0.00 0.00 3.85
4521 6557 1.904537 TCCCTCCGGTCCTTTTTACTC 59.095 52.381 0.00 0.00 0.00 2.59
4522 6558 1.907255 CTCCCTCCGGTCCTTTTTACT 59.093 52.381 0.00 0.00 0.00 2.24
4523 6559 1.627329 ACTCCCTCCGGTCCTTTTTAC 59.373 52.381 0.00 0.00 0.00 2.01
4524 6560 2.034436 ACTCCCTCCGGTCCTTTTTA 57.966 50.000 0.00 0.00 0.00 1.52
4525 6561 2.034436 TACTCCCTCCGGTCCTTTTT 57.966 50.000 0.00 0.00 0.00 1.94
4526 6562 2.117051 GATACTCCCTCCGGTCCTTTT 58.883 52.381 0.00 0.00 0.00 2.27
4527 6563 1.007963 TGATACTCCCTCCGGTCCTTT 59.992 52.381 0.00 0.00 0.00 3.11
4528 6564 0.635009 TGATACTCCCTCCGGTCCTT 59.365 55.000 0.00 0.00 0.00 3.36
4529 6565 0.186386 CTGATACTCCCTCCGGTCCT 59.814 60.000 0.00 0.00 0.00 3.85
4530 6566 0.828343 CCTGATACTCCCTCCGGTCC 60.828 65.000 0.00 0.00 0.00 4.46
4531 6567 0.106116 ACCTGATACTCCCTCCGGTC 60.106 60.000 0.00 0.00 0.00 4.79
4532 6568 1.229131 TACCTGATACTCCCTCCGGT 58.771 55.000 0.00 0.00 34.93 5.28
4533 6569 2.376695 TTACCTGATACTCCCTCCGG 57.623 55.000 0.00 0.00 0.00 5.14
4534 6570 2.628657 CCTTTACCTGATACTCCCTCCG 59.371 54.545 0.00 0.00 0.00 4.63
4535 6571 3.924922 TCCTTTACCTGATACTCCCTCC 58.075 50.000 0.00 0.00 0.00 4.30
4536 6572 5.209659 TCTTCCTTTACCTGATACTCCCTC 58.790 45.833 0.00 0.00 0.00 4.30
4537 6573 5.222278 TCTTCCTTTACCTGATACTCCCT 57.778 43.478 0.00 0.00 0.00 4.20
4538 6574 5.952347 TTCTTCCTTTACCTGATACTCCC 57.048 43.478 0.00 0.00 0.00 4.30
4539 6575 7.797062 AGAATTCTTCCTTTACCTGATACTCC 58.203 38.462 0.88 0.00 0.00 3.85
4540 6576 9.103861 CAAGAATTCTTCCTTTACCTGATACTC 57.896 37.037 17.91 0.00 33.11 2.59
4541 6577 8.606830 ACAAGAATTCTTCCTTTACCTGATACT 58.393 33.333 17.91 0.00 33.11 2.12
4689 6726 7.432838 GGTCAAAGTTTAGCACAAAATACGAAA 59.567 33.333 0.00 0.00 0.00 3.46
4693 6730 9.394477 CTAAGGTCAAAGTTTAGCACAAAATAC 57.606 33.333 0.00 0.00 0.00 1.89
4916 7136 4.360951 TCTTCATCCGGGTTTGTTAGTT 57.639 40.909 0.00 0.00 0.00 2.24
4947 7167 9.582431 CAAGTACTACCTTCATCGATTCTAAAA 57.418 33.333 0.00 0.00 0.00 1.52
4949 7169 8.515695 TCAAGTACTACCTTCATCGATTCTAA 57.484 34.615 0.00 0.00 0.00 2.10
5064 7477 7.496346 ACAGTCTAGTGGAAAATGAATCCTA 57.504 36.000 0.00 0.00 37.85 2.94
5076 7489 4.838423 TCTGAATCCAAACAGTCTAGTGGA 59.162 41.667 0.39 0.39 44.07 4.02
5152 7568 6.775629 AGAAGAAGGTAAGATAGAGCTAGTGG 59.224 42.308 0.00 0.00 0.00 4.00
5679 8095 0.741221 CTGTTACCTGAAGCGCCTCC 60.741 60.000 2.29 0.00 0.00 4.30
5761 8179 4.396790 TGGTAATTCCTAAAATGGTGCGAC 59.603 41.667 0.00 0.00 37.07 5.19
5783 8201 8.296799 TCATTTTTCGGAAATCAAATCAGTTG 57.703 30.769 3.67 0.00 38.71 3.16
5812 8231 5.303078 AGCATCTCGAAGACCTACACATATT 59.697 40.000 0.00 0.00 0.00 1.28
5928 8347 1.734465 CTGCATCTCGGTGAAAAGGTC 59.266 52.381 0.00 0.00 0.00 3.85
6392 8811 1.315690 TGTTGAACGTCCGAGTCTCT 58.684 50.000 0.00 0.00 0.00 3.10
6503 8922 5.415221 TCGATCACATTGTTGTATGTAGCA 58.585 37.500 0.00 0.00 36.64 3.49
6509 8928 3.872696 TGCCTCGATCACATTGTTGTAT 58.127 40.909 0.00 0.00 33.76 2.29
6518 8937 1.089112 CAGCAAATGCCTCGATCACA 58.911 50.000 0.94 0.00 43.38 3.58
6551 8970 6.423604 GGTTAAATGTGTCCTCCATGTTTTTG 59.576 38.462 0.00 0.00 0.00 2.44
6602 9021 6.426646 AGACAACAGAAGGTCTTTGTATCT 57.573 37.500 0.00 0.00 41.40 1.98
6626 9045 2.560542 TGCATTGCTGAACCCGTTTATT 59.439 40.909 10.49 0.00 0.00 1.40
6638 9057 0.390735 GGAAAAGGGCTGCATTGCTG 60.391 55.000 10.49 10.68 0.00 4.41
6707 9126 4.989168 ACAGAGTTGTGGAAAGACGTATTC 59.011 41.667 0.00 0.07 35.83 1.75
6713 9132 4.496507 GCAAGAACAGAGTTGTGGAAAGAC 60.497 45.833 0.00 0.00 37.67 3.01
6719 9138 0.588252 CCGCAAGAACAGAGTTGTGG 59.412 55.000 0.56 0.56 45.33 4.17
6810 9229 2.149578 GGAGTATGTGATGGCATCTGC 58.850 52.381 26.49 19.16 41.14 4.26
6878 9297 0.250467 GGTTCTCCTGTTGCAGAGCA 60.250 55.000 0.00 0.00 36.47 4.26
6935 9354 9.253832 TCAACACCATAATCAATTTATGAGGTT 57.746 29.630 6.86 7.46 46.88 3.50
6943 9362 9.028284 AGATGAACTCAACACCATAATCAATTT 57.972 29.630 0.00 0.00 0.00 1.82
6975 9394 6.648879 TGAAGAGGAACGGATTTTTCATTT 57.351 33.333 0.00 0.00 0.00 2.32
7009 9428 8.801882 AGTTAATTTGCTAGGTTGCACTATTA 57.198 30.769 0.00 0.00 43.20 0.98
7010 9429 7.703058 AGTTAATTTGCTAGGTTGCACTATT 57.297 32.000 0.00 0.00 43.20 1.73
7014 9433 6.314784 CAGTAGTTAATTTGCTAGGTTGCAC 58.685 40.000 0.00 0.00 43.20 4.57
7022 9441 7.393234 ACAATTCTGGCAGTAGTTAATTTGCTA 59.607 33.333 15.27 0.00 36.79 3.49
7141 9682 5.742063 ACAAAGGAGGTACTAAATAGTGGC 58.258 41.667 3.36 0.00 41.55 5.01
7162 9703 3.472652 AGCACGTCACTTATTTGGAACA 58.527 40.909 0.00 0.00 0.00 3.18
7163 9704 4.483476 AAGCACGTCACTTATTTGGAAC 57.517 40.909 0.00 0.00 0.00 3.62
7164 9705 5.761234 ACTAAAGCACGTCACTTATTTGGAA 59.239 36.000 0.98 0.00 0.00 3.53
7165 9706 5.302360 ACTAAAGCACGTCACTTATTTGGA 58.698 37.500 0.98 0.00 0.00 3.53
7166 9707 5.607119 ACTAAAGCACGTCACTTATTTGG 57.393 39.130 0.98 0.00 0.00 3.28
7167 9708 6.655062 TGAACTAAAGCACGTCACTTATTTG 58.345 36.000 0.98 0.00 0.00 2.32
7168 9709 6.854496 TGAACTAAAGCACGTCACTTATTT 57.146 33.333 0.98 0.00 0.00 1.40
7169 9710 6.854496 TTGAACTAAAGCACGTCACTTATT 57.146 33.333 0.98 0.00 0.00 1.40
7170 9711 6.854496 TTTGAACTAAAGCACGTCACTTAT 57.146 33.333 0.98 0.00 0.00 1.73
7171 9712 6.854496 ATTTGAACTAAAGCACGTCACTTA 57.146 33.333 0.98 0.00 0.00 2.24
7172 9713 5.751243 ATTTGAACTAAAGCACGTCACTT 57.249 34.783 0.00 0.00 0.00 3.16
7173 9714 5.065988 ACAATTTGAACTAAAGCACGTCACT 59.934 36.000 2.79 0.00 0.00 3.41
7174 9715 5.270853 ACAATTTGAACTAAAGCACGTCAC 58.729 37.500 2.79 0.00 0.00 3.67
7175 9716 5.493133 ACAATTTGAACTAAAGCACGTCA 57.507 34.783 2.79 0.00 0.00 4.35
7176 9717 6.470877 TCAAACAATTTGAACTAAAGCACGTC 59.529 34.615 2.79 0.00 45.94 4.34
7177 9718 6.326375 TCAAACAATTTGAACTAAAGCACGT 58.674 32.000 2.79 0.00 45.94 4.49
7178 9719 6.804534 TCAAACAATTTGAACTAAAGCACG 57.195 33.333 2.79 0.00 45.94 5.34
7205 9746 9.645128 TCCATTCCATAATAACTGTCATGATTT 57.355 29.630 0.00 0.00 0.00 2.17
7206 9747 9.293404 CTCCATTCCATAATAACTGTCATGATT 57.707 33.333 0.00 0.00 0.00 2.57
7207 9748 7.886970 CCTCCATTCCATAATAACTGTCATGAT 59.113 37.037 0.00 0.00 0.00 2.45
7208 9749 7.226441 CCTCCATTCCATAATAACTGTCATGA 58.774 38.462 0.00 0.00 0.00 3.07
7209 9750 6.432162 CCCTCCATTCCATAATAACTGTCATG 59.568 42.308 0.00 0.00 0.00 3.07
7210 9751 6.332635 TCCCTCCATTCCATAATAACTGTCAT 59.667 38.462 0.00 0.00 0.00 3.06
7211 9752 5.669904 TCCCTCCATTCCATAATAACTGTCA 59.330 40.000 0.00 0.00 0.00 3.58
7212 9753 6.183361 ACTCCCTCCATTCCATAATAACTGTC 60.183 42.308 0.00 0.00 0.00 3.51
7213 9754 5.672194 ACTCCCTCCATTCCATAATAACTGT 59.328 40.000 0.00 0.00 0.00 3.55
7214 9755 6.192970 ACTCCCTCCATTCCATAATAACTG 57.807 41.667 0.00 0.00 0.00 3.16
7215 9756 9.047947 GTATACTCCCTCCATTCCATAATAACT 57.952 37.037 0.00 0.00 0.00 2.24
7216 9757 8.822805 TGTATACTCCCTCCATTCCATAATAAC 58.177 37.037 4.17 0.00 0.00 1.89
7217 9758 8.982471 TGTATACTCCCTCCATTCCATAATAA 57.018 34.615 4.17 0.00 0.00 1.40
7218 9759 9.574577 AATGTATACTCCCTCCATTCCATAATA 57.425 33.333 4.17 0.00 0.00 0.98
7219 9760 8.468547 AATGTATACTCCCTCCATTCCATAAT 57.531 34.615 4.17 0.00 0.00 1.28
7220 9761 7.888514 AATGTATACTCCCTCCATTCCATAA 57.111 36.000 4.17 0.00 0.00 1.90
7221 9762 7.888514 AAATGTATACTCCCTCCATTCCATA 57.111 36.000 4.17 0.00 0.00 2.74
7222 9763 6.786843 AAATGTATACTCCCTCCATTCCAT 57.213 37.500 4.17 0.00 0.00 3.41
7223 9764 6.159575 TCAAAATGTATACTCCCTCCATTCCA 59.840 38.462 4.17 0.00 0.00 3.53
7224 9765 6.601332 TCAAAATGTATACTCCCTCCATTCC 58.399 40.000 4.17 0.00 0.00 3.01
7225 9766 7.391833 GGATCAAAATGTATACTCCCTCCATTC 59.608 40.741 4.17 0.00 0.00 2.67
7226 9767 7.074237 AGGATCAAAATGTATACTCCCTCCATT 59.926 37.037 4.17 0.00 0.00 3.16
7227 9768 6.564152 AGGATCAAAATGTATACTCCCTCCAT 59.436 38.462 4.17 0.00 0.00 3.41
7228 9769 5.911178 AGGATCAAAATGTATACTCCCTCCA 59.089 40.000 4.17 0.00 0.00 3.86
7229 9770 6.441088 AGGATCAAAATGTATACTCCCTCC 57.559 41.667 4.17 2.14 0.00 4.30
7230 9771 7.100409 GCTAGGATCAAAATGTATACTCCCTC 58.900 42.308 4.17 0.00 0.00 4.30
7231 9772 6.558775 TGCTAGGATCAAAATGTATACTCCCT 59.441 38.462 4.17 0.00 0.00 4.20
7232 9773 6.769512 TGCTAGGATCAAAATGTATACTCCC 58.230 40.000 4.17 0.00 0.00 4.30
7233 9774 7.445945 ACTGCTAGGATCAAAATGTATACTCC 58.554 38.462 4.17 0.81 0.00 3.85
7234 9775 8.144478 TGACTGCTAGGATCAAAATGTATACTC 58.856 37.037 4.17 0.00 0.00 2.59
7235 9776 8.023021 TGACTGCTAGGATCAAAATGTATACT 57.977 34.615 4.17 0.00 0.00 2.12
7278 9819 5.798132 TCTGAATCAGCTTACAGACACATT 58.202 37.500 5.18 0.00 35.01 2.71
7302 9843 4.654091 ATTCACTCCACACAAACCTTTG 57.346 40.909 0.00 0.00 43.62 2.77
7304 9845 5.010282 GGATATTCACTCCACACAAACCTT 58.990 41.667 0.00 0.00 32.72 3.50
7306 9847 4.589908 AGGATATTCACTCCACACAAACC 58.410 43.478 0.00 0.00 35.08 3.27
7364 9905 6.858993 GCAGTTACCGTTAACATGAAAATGAA 59.141 34.615 5.62 0.00 40.25 2.57
7380 9921 7.309920 ACCATTTGTTATTTTAGCAGTTACCG 58.690 34.615 0.00 0.00 0.00 4.02
7381 9922 8.301002 TGACCATTTGTTATTTTAGCAGTTACC 58.699 33.333 0.00 0.00 0.00 2.85
7411 9952 0.729116 CAGGTCTACTGCGCCAAATG 59.271 55.000 4.18 0.00 40.97 2.32
7421 9962 6.879458 CACCTAGCAATAAAAACAGGTCTACT 59.121 38.462 0.00 0.00 34.18 2.57
7422 9963 6.877322 TCACCTAGCAATAAAAACAGGTCTAC 59.123 38.462 0.00 0.00 34.18 2.59
7423 9964 7.011499 TCACCTAGCAATAAAAACAGGTCTA 57.989 36.000 0.00 0.00 34.18 2.59
7500 10049 2.762887 TGCCTCAACTCTCCTGACATAG 59.237 50.000 0.00 0.00 0.00 2.23
7501 10050 2.497675 GTGCCTCAACTCTCCTGACATA 59.502 50.000 0.00 0.00 0.00 2.29
7512 10061 1.067283 CACGAGATGAGTGCCTCAACT 60.067 52.381 12.57 12.57 44.29 3.16
7513 10062 1.354040 CACGAGATGAGTGCCTCAAC 58.646 55.000 8.66 6.66 44.04 3.18
7514 10063 0.247460 CCACGAGATGAGTGCCTCAA 59.753 55.000 8.66 0.00 44.04 3.02
7515 10064 1.607801 CCCACGAGATGAGTGCCTCA 61.608 60.000 7.26 7.26 44.99 3.86
7532 10088 0.681733 TCTGAACAGACTGCAGACCC 59.318 55.000 23.35 9.04 34.02 4.46
7560 10116 7.607615 ACCTTCTCAAACCAAGTAGTACTAA 57.392 36.000 3.61 0.00 0.00 2.24
7561 10117 7.946776 AGTACCTTCTCAAACCAAGTAGTACTA 59.053 37.037 2.50 0.00 0.00 1.82
7562 10118 6.781507 AGTACCTTCTCAAACCAAGTAGTACT 59.218 38.462 0.00 0.00 0.00 2.73
7608 10164 4.111577 ACTTCAGATGAATTAGGGGTGGA 58.888 43.478 0.00 0.00 33.01 4.02
7611 10167 6.098982 CAGAGTACTTCAGATGAATTAGGGGT 59.901 42.308 0.00 0.00 33.01 4.95
7615 10171 9.868277 AGAAACAGAGTACTTCAGATGAATTAG 57.132 33.333 0.00 0.00 33.01 1.73
7619 10175 7.500992 ACAAGAAACAGAGTACTTCAGATGAA 58.499 34.615 0.00 0.00 0.00 2.57
7647 10207 4.539596 TTGATTCAATCATGGGATGGGA 57.460 40.909 0.00 0.00 39.39 4.37
7654 10214 5.361571 TCCTGAACCATTGATTCAATCATGG 59.638 40.000 19.46 19.46 40.58 3.66
7661 10221 6.373005 TCTAGTTCCTGAACCATTGATTCA 57.627 37.500 6.41 0.00 42.06 2.57
7666 10226 9.793252 CATATTTTTCTAGTTCCTGAACCATTG 57.207 33.333 6.41 0.00 42.06 2.82
7667 10227 9.753674 TCATATTTTTCTAGTTCCTGAACCATT 57.246 29.630 6.41 0.00 42.06 3.16
7668 10228 9.927081 ATCATATTTTTCTAGTTCCTGAACCAT 57.073 29.630 6.41 0.00 42.06 3.55
7669 10229 9.396022 GATCATATTTTTCTAGTTCCTGAACCA 57.604 33.333 6.41 0.00 42.06 3.67
7670 10230 8.841300 GGATCATATTTTTCTAGTTCCTGAACC 58.159 37.037 6.41 0.00 42.06 3.62
7671 10231 8.841300 GGGATCATATTTTTCTAGTTCCTGAAC 58.159 37.037 1.75 1.75 41.45 3.18
7694 10254 0.248012 TTCGCTGCAAGAATACGGGA 59.752 50.000 0.00 0.00 34.07 5.14
7697 10257 0.026803 GGCTTCGCTGCAAGAATACG 59.973 55.000 13.51 0.00 34.07 3.06
7707 10267 1.078214 TTCCAGATGGGCTTCGCTG 60.078 57.895 0.00 0.00 36.21 5.18
7750 10310 7.380536 ACACTTAGAAATGGTACGAACATACA 58.619 34.615 0.00 0.00 0.00 2.29
7751 10311 7.823149 ACACTTAGAAATGGTACGAACATAC 57.177 36.000 0.00 0.00 0.00 2.39
7762 10322 6.375455 AGAAGGCATGTTACACTTAGAAATGG 59.625 38.462 0.00 0.00 0.00 3.16
7763 10323 7.383102 AGAAGGCATGTTACACTTAGAAATG 57.617 36.000 0.00 0.00 0.00 2.32
7767 10327 5.865085 ACAAGAAGGCATGTTACACTTAGA 58.135 37.500 0.00 0.00 0.00 2.10
7770 10330 4.718961 AGACAAGAAGGCATGTTACACTT 58.281 39.130 0.00 0.00 0.00 3.16
7774 10334 8.718102 TTATAGAAGACAAGAAGGCATGTTAC 57.282 34.615 0.00 0.00 0.00 2.50
7814 10374 9.554395 TCCATATTAATTGTCGCTGATTTAGAA 57.446 29.630 0.00 0.00 0.00 2.10
7815 10375 9.725019 ATCCATATTAATTGTCGCTGATTTAGA 57.275 29.630 0.00 0.00 0.00 2.10
7822 10382 4.929211 TCCGATCCATATTAATTGTCGCTG 59.071 41.667 0.00 0.00 0.00 5.18
7824 10384 4.330074 CCTCCGATCCATATTAATTGTCGC 59.670 45.833 0.00 0.00 0.00 5.19
7825 10385 4.870426 CCCTCCGATCCATATTAATTGTCG 59.130 45.833 0.00 0.00 0.00 4.35
7826 10386 6.049955 TCCCTCCGATCCATATTAATTGTC 57.950 41.667 0.00 0.00 0.00 3.18
7827 10387 5.548056 ACTCCCTCCGATCCATATTAATTGT 59.452 40.000 0.00 0.00 0.00 2.71
7828 10388 6.054860 ACTCCCTCCGATCCATATTAATTG 57.945 41.667 0.00 0.00 0.00 2.32
7830 10390 5.364157 GCTACTCCCTCCGATCCATATTAAT 59.636 44.000 0.00 0.00 0.00 1.40
7832 10392 4.264217 TGCTACTCCCTCCGATCCATATTA 60.264 45.833 0.00 0.00 0.00 0.98
7833 10393 3.100671 GCTACTCCCTCCGATCCATATT 58.899 50.000 0.00 0.00 0.00 1.28
7834 10394 2.043115 TGCTACTCCCTCCGATCCATAT 59.957 50.000 0.00 0.00 0.00 1.78
7835 10395 1.427753 TGCTACTCCCTCCGATCCATA 59.572 52.381 0.00 0.00 0.00 2.74
7836 10396 0.188587 TGCTACTCCCTCCGATCCAT 59.811 55.000 0.00 0.00 0.00 3.41
7837 10397 0.188587 ATGCTACTCCCTCCGATCCA 59.811 55.000 0.00 0.00 0.00 3.41
7838 10398 1.819903 GTATGCTACTCCCTCCGATCC 59.180 57.143 0.00 0.00 0.00 3.36
7839 10399 2.515854 TGTATGCTACTCCCTCCGATC 58.484 52.381 0.00 0.00 0.00 3.69
7840 10400 2.677542 TGTATGCTACTCCCTCCGAT 57.322 50.000 0.00 0.00 0.00 4.18
7841 10401 2.447408 TTGTATGCTACTCCCTCCGA 57.553 50.000 0.00 0.00 0.00 4.55
7842 10402 2.028930 GGATTGTATGCTACTCCCTCCG 60.029 54.545 0.00 0.00 0.00 4.63
7843 10403 3.007398 CAGGATTGTATGCTACTCCCTCC 59.993 52.174 0.00 0.00 0.00 4.30
7844 10404 3.007398 CCAGGATTGTATGCTACTCCCTC 59.993 52.174 0.00 0.00 0.00 4.30
7845 10405 2.975489 CCAGGATTGTATGCTACTCCCT 59.025 50.000 0.00 0.00 0.00 4.20
7846 10406 2.972713 TCCAGGATTGTATGCTACTCCC 59.027 50.000 0.00 0.00 0.00 4.30
7847 10407 4.689612 TTCCAGGATTGTATGCTACTCC 57.310 45.455 0.00 0.00 0.00 3.85
7848 10408 6.759272 TGTATTCCAGGATTGTATGCTACTC 58.241 40.000 0.00 0.00 0.00 2.59
7849 10409 6.747414 TGTATTCCAGGATTGTATGCTACT 57.253 37.500 0.00 0.00 0.00 2.57
7850 10410 7.880195 AGAATGTATTCCAGGATTGTATGCTAC 59.120 37.037 0.00 0.00 37.51 3.58
7851 10411 7.879677 CAGAATGTATTCCAGGATTGTATGCTA 59.120 37.037 0.00 0.00 37.51 3.49
7878 10438 6.791303 TGTTATAGCAACCGAATGGAAATTC 58.209 36.000 0.00 0.00 39.21 2.17
7889 10449 4.097714 CACAAAGCATGTTATAGCAACCG 58.902 43.478 0.00 0.00 41.46 4.44
7897 10457 5.922544 GCTGAGAAAACACAAAGCATGTTAT 59.077 36.000 0.00 0.00 41.46 1.89
7931 10492 8.535690 ACTTGTCTTCACTAAAACAGTATAGC 57.464 34.615 0.00 0.00 34.98 2.97
7937 10498 9.209175 AGCTTATACTTGTCTTCACTAAAACAG 57.791 33.333 0.00 0.00 0.00 3.16
7938 10499 8.988934 CAGCTTATACTTGTCTTCACTAAAACA 58.011 33.333 0.00 0.00 0.00 2.83
7940 10501 7.606456 CCCAGCTTATACTTGTCTTCACTAAAA 59.394 37.037 0.00 0.00 0.00 1.52
7941 10502 7.038587 TCCCAGCTTATACTTGTCTTCACTAAA 60.039 37.037 0.00 0.00 0.00 1.85
7944 10505 4.777896 TCCCAGCTTATACTTGTCTTCACT 59.222 41.667 0.00 0.00 0.00 3.41
7945 10506 4.870991 GTCCCAGCTTATACTTGTCTTCAC 59.129 45.833 0.00 0.00 0.00 3.18
7946 10507 4.081087 GGTCCCAGCTTATACTTGTCTTCA 60.081 45.833 0.00 0.00 0.00 3.02
7948 10509 3.200165 GGGTCCCAGCTTATACTTGTCTT 59.800 47.826 1.78 0.00 0.00 3.01
7949 10510 2.772515 GGGTCCCAGCTTATACTTGTCT 59.227 50.000 1.78 0.00 0.00 3.41
7950 10511 2.504175 TGGGTCCCAGCTTATACTTGTC 59.496 50.000 6.47 0.00 0.00 3.18
7951 10512 2.238898 GTGGGTCCCAGCTTATACTTGT 59.761 50.000 12.21 0.00 32.34 3.16
7952 10513 2.505819 AGTGGGTCCCAGCTTATACTTG 59.494 50.000 12.21 0.00 32.34 3.16
7953 10514 2.846950 AGTGGGTCCCAGCTTATACTT 58.153 47.619 12.21 0.00 32.34 2.24
7954 10515 2.570386 AGTGGGTCCCAGCTTATACT 57.430 50.000 12.21 0.00 32.34 2.12
7961 10522 3.857157 TTATCAATAGTGGGTCCCAGC 57.143 47.619 12.21 6.62 32.34 4.85
7969 10530 7.386851 ACATCGGGAGTATTTATCAATAGTGG 58.613 38.462 0.00 0.00 29.84 4.00
7971 10532 8.251721 GCTACATCGGGAGTATTTATCAATAGT 58.748 37.037 0.00 0.00 32.03 2.12
7975 10536 5.542635 AGGCTACATCGGGAGTATTTATCAA 59.457 40.000 0.00 0.00 0.00 2.57
7989 10550 3.243101 ACGTATGTCTTCAGGCTACATCG 60.243 47.826 3.98 9.91 35.54 3.84


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.