Multiple sequence alignment - TraesCS4A01G175700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G175700 chr4A 100.000 4598 0 0 1 4598 446624266 446619669 0.000000e+00 8492.0
1 TraesCS4A01G175700 chr4A 72.523 2533 606 77 1001 3491 713038409 713040893 0.000000e+00 739.0
2 TraesCS4A01G175700 chr4A 88.073 436 8 8 4163 4597 718479409 718479801 1.160000e-130 477.0
3 TraesCS4A01G175700 chr4D 96.706 3522 99 4 117 3635 123094844 123098351 0.000000e+00 5845.0
4 TraesCS4A01G175700 chr4D 96.273 161 6 0 258 418 123094590 123094750 9.810000e-67 265.0
5 TraesCS4A01G175700 chr4D 86.134 238 25 5 1 236 123094281 123094512 2.750000e-62 250.0
6 TraesCS4A01G175700 chr4D 81.643 207 22 7 3792 3992 123098346 123098542 1.710000e-34 158.0
7 TraesCS4A01G175700 chr4D 93.421 76 5 0 4080 4155 477524199 477524274 3.760000e-21 113.0
8 TraesCS4A01G175700 chr6B 96.241 3379 110 8 267 3637 155553402 155550033 0.000000e+00 5520.0
9 TraesCS4A01G175700 chr6B 89.474 437 14 7 4162 4597 397526456 397526861 1.470000e-144 523.0
10 TraesCS4A01G175700 chr6B 91.228 57 5 0 180 236 155634956 155634900 1.370000e-10 78.7
11 TraesCS4A01G175700 chr1A 95.071 2313 101 7 233 2539 121045962 121048267 0.000000e+00 3627.0
12 TraesCS4A01G175700 chr1A 93.363 1115 73 1 2523 3637 121048427 121049540 0.000000e+00 1648.0
13 TraesCS4A01G175700 chr1A 88.415 164 9 3 4372 4533 558465221 558465376 6.070000e-44 189.0
14 TraesCS4A01G175700 chr1A 86.719 128 11 5 4147 4270 558464957 558465082 2.230000e-28 137.0
15 TraesCS4A01G175700 chr1A 89.855 69 7 0 168 236 121045838 121045906 6.340000e-14 89.8
16 TraesCS4A01G175700 chr7D 78.851 2194 410 39 1308 3486 550892232 550894386 0.000000e+00 1432.0
17 TraesCS4A01G175700 chr7D 74.217 2618 600 66 1014 3595 555196199 555193621 0.000000e+00 1026.0
18 TraesCS4A01G175700 chr7D 73.965 2416 568 56 1107 3493 20598650 20601033 0.000000e+00 920.0
19 TraesCS4A01G175700 chr7D 72.492 2323 566 67 1309 3595 20332693 20334978 0.000000e+00 682.0
20 TraesCS4A01G175700 chr7D 90.062 161 15 1 3629 3789 124879224 124879065 1.680000e-49 207.0
21 TraesCS4A01G175700 chr1B 75.991 2674 575 56 845 3490 10410221 10407587 0.000000e+00 1319.0
22 TraesCS4A01G175700 chr1B 99.087 438 4 0 4161 4598 490441578 490442015 0.000000e+00 787.0
23 TraesCS4A01G175700 chr1B 93.810 210 13 0 3413 3622 173116512 173116721 2.670000e-82 316.0
24 TraesCS4A01G175700 chr1B 98.571 70 1 0 3340 3409 173115518 173115587 1.740000e-24 124.0
25 TraesCS4A01G175700 chr1B 78.846 208 26 11 3792 3992 173116729 173116925 1.740000e-24 124.0
26 TraesCS4A01G175700 chr4B 91.343 901 44 5 1 867 187620356 187621256 0.000000e+00 1201.0
27 TraesCS4A01G175700 chr4B 95.056 627 28 3 857 1481 187628729 187629354 0.000000e+00 983.0
28 TraesCS4A01G175700 chr4B 92.958 71 4 1 4083 4152 661153716 661153646 8.140000e-18 102.0
29 TraesCS4A01G175700 chr7B 79.028 1440 272 27 2061 3486 595676851 595678274 0.000000e+00 959.0
30 TraesCS4A01G175700 chr7B 73.865 2533 599 55 1088 3591 601114734 601117232 0.000000e+00 952.0
31 TraesCS4A01G175700 chr7B 98.678 454 2 4 4145 4598 673672808 673673257 0.000000e+00 802.0
32 TraesCS4A01G175700 chr7A 73.890 2589 578 83 947 3492 20980730 20983263 0.000000e+00 946.0
33 TraesCS4A01G175700 chr7A 73.476 2624 609 71 1014 3595 640662542 640665120 0.000000e+00 909.0
34 TraesCS4A01G175700 chr7A 92.174 115 4 3 4046 4155 118443816 118443702 1.710000e-34 158.0
35 TraesCS4A01G175700 chr7A 92.208 77 6 0 3631 3707 143353154 143353230 4.860000e-20 110.0
36 TraesCS4A01G175700 chr3B 89.435 407 9 16 4192 4597 747749705 747750078 2.490000e-132 483.0
37 TraesCS4A01G175700 chr3B 88.189 127 14 1 3659 3784 427156677 427156551 2.870000e-32 150.0
38 TraesCS4A01G175700 chr5D 79.286 420 33 24 4163 4573 107010085 107009711 1.280000e-60 244.0
39 TraesCS4A01G175700 chr5B 94.702 151 7 1 4432 4582 597089696 597089845 2.770000e-57 233.0
40 TraesCS4A01G175700 chr5B 75.740 169 33 8 3628 3792 609102307 609102143 1.370000e-10 78.7
41 TraesCS4A01G175700 chr5A 89.024 164 18 0 3631 3794 428808902 428808739 2.170000e-48 204.0
42 TraesCS4A01G175700 chrUn 88.623 167 9 3 4372 4536 74561266 74561424 1.310000e-45 195.0
43 TraesCS4A01G175700 chr2A 88.166 169 9 4 4372 4538 768192970 768193129 1.690000e-44 191.0
44 TraesCS4A01G175700 chr2A 90.164 122 12 0 3629 3750 607947675 607947554 4.760000e-35 159.0
45 TraesCS4A01G175700 chr2A 92.632 95 6 1 4162 4256 335679073 335679166 8.020000e-28 135.0
46 TraesCS4A01G175700 chr2A 88.496 113 8 4 4163 4270 768192719 768192831 1.040000e-26 132.0
47 TraesCS4A01G175700 chr3D 87.333 150 10 1 3629 3778 329602378 329602238 3.680000e-36 163.0
48 TraesCS4A01G175700 chr3D 93.103 87 5 1 4162 4247 67013034 67012948 4.830000e-25 126.0
49 TraesCS4A01G175700 chr1D 95.775 71 2 1 4085 4155 27893087 27893156 3.760000e-21 113.0
50 TraesCS4A01G175700 chr6D 100.000 36 0 0 4083 4118 14899730 14899695 2.970000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G175700 chr4A 446619669 446624266 4597 True 8492.000000 8492 100.000 1 4598 1 chr4A.!!$R1 4597
1 TraesCS4A01G175700 chr4A 713038409 713040893 2484 False 739.000000 739 72.523 1001 3491 1 chr4A.!!$F1 2490
2 TraesCS4A01G175700 chr4D 123094281 123098542 4261 False 1629.500000 5845 90.189 1 3992 4 chr4D.!!$F2 3991
3 TraesCS4A01G175700 chr6B 155550033 155553402 3369 True 5520.000000 5520 96.241 267 3637 1 chr6B.!!$R1 3370
4 TraesCS4A01G175700 chr1A 121045838 121049540 3702 False 1788.266667 3627 92.763 168 3637 3 chr1A.!!$F1 3469
5 TraesCS4A01G175700 chr7D 550892232 550894386 2154 False 1432.000000 1432 78.851 1308 3486 1 chr7D.!!$F3 2178
6 TraesCS4A01G175700 chr7D 555193621 555196199 2578 True 1026.000000 1026 74.217 1014 3595 1 chr7D.!!$R2 2581
7 TraesCS4A01G175700 chr7D 20598650 20601033 2383 False 920.000000 920 73.965 1107 3493 1 chr7D.!!$F2 2386
8 TraesCS4A01G175700 chr7D 20332693 20334978 2285 False 682.000000 682 72.492 1309 3595 1 chr7D.!!$F1 2286
9 TraesCS4A01G175700 chr1B 10407587 10410221 2634 True 1319.000000 1319 75.991 845 3490 1 chr1B.!!$R1 2645
10 TraesCS4A01G175700 chr4B 187620356 187621256 900 False 1201.000000 1201 91.343 1 867 1 chr4B.!!$F1 866
11 TraesCS4A01G175700 chr4B 187628729 187629354 625 False 983.000000 983 95.056 857 1481 1 chr4B.!!$F2 624
12 TraesCS4A01G175700 chr7B 595676851 595678274 1423 False 959.000000 959 79.028 2061 3486 1 chr7B.!!$F1 1425
13 TraesCS4A01G175700 chr7B 601114734 601117232 2498 False 952.000000 952 73.865 1088 3591 1 chr7B.!!$F2 2503
14 TraesCS4A01G175700 chr7A 20980730 20983263 2533 False 946.000000 946 73.890 947 3492 1 chr7A.!!$F1 2545
15 TraesCS4A01G175700 chr7A 640662542 640665120 2578 False 909.000000 909 73.476 1014 3595 1 chr7A.!!$F3 2581

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
41 42 0.839946 GGCAAGGATCCCAAGCTCTA 59.160 55.000 8.55 0.0 0.00 2.43 F
841 1327 1.892474 GTCTCAGCTCTGACTTGAGGT 59.108 52.381 11.58 0.0 44.45 3.85 F
1785 2275 0.250640 AGAAGGGCAGCAGAGTTGTG 60.251 55.000 0.00 0.0 0.00 3.33 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1785 2275 0.322816 TGCCTTCCCTGCTTGTGATC 60.323 55.0 0.0 0.0 0.00 2.92 R
2683 3357 0.817634 TTTGAACCACGCAGACCCAG 60.818 55.0 0.0 0.0 0.00 4.45 R
3722 4401 0.039074 CAGGTCTCTGCTCGTCGTTT 60.039 55.0 0.0 0.0 33.86 3.60 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 0.839946 GGCAAGGATCCCAAGCTCTA 59.160 55.000 8.55 0.00 0.00 2.43
44 45 3.265479 GGCAAGGATCCCAAGCTCTATAT 59.735 47.826 8.55 0.00 0.00 0.86
88 102 2.819608 GTGGTGACTGGTGTGCATAAAT 59.180 45.455 0.00 0.00 0.00 1.40
89 103 3.255642 GTGGTGACTGGTGTGCATAAATT 59.744 43.478 0.00 0.00 0.00 1.82
194 211 4.114997 GCCACGCCATGTTTCCCG 62.115 66.667 0.00 0.00 0.00 5.14
236 253 6.322491 GTGAGAGCAATTATTGGTTTGGTAC 58.678 40.000 11.06 3.85 42.23 3.34
237 254 6.007076 TGAGAGCAATTATTGGTTTGGTACA 58.993 36.000 11.06 0.00 42.23 2.90
282 753 5.297569 AGAAACTTTAACAGACCTGAGCT 57.702 39.130 3.76 0.00 0.00 4.09
326 800 2.488355 GGATCGACGAACGGCAGA 59.512 61.111 0.00 0.00 42.82 4.26
486 961 3.244875 TGGCTCAAAACTGCAAGATCCTA 60.245 43.478 0.00 0.00 37.43 2.94
615 1095 7.667575 TCCTTCTAGACTAGATCTGCAAATT 57.332 36.000 12.98 0.00 38.49 1.82
721 1201 6.663093 TGCAGAAGTATGGTAATTCATGGTTT 59.337 34.615 0.00 0.00 35.39 3.27
841 1327 1.892474 GTCTCAGCTCTGACTTGAGGT 59.108 52.381 11.58 0.00 44.45 3.85
1037 1526 2.805295 GCCGAATGGACATACGGAATCA 60.805 50.000 0.00 0.00 46.94 2.57
1072 1561 2.342406 TGAAATCTGGGTGGAGGAGA 57.658 50.000 0.00 0.00 0.00 3.71
1080 1569 2.368221 CTGGGTGGAGGAGATGAGAATC 59.632 54.545 0.00 0.00 0.00 2.52
1562 2051 6.043243 TGGGTCTCTGTCTCTCAAACTTATTT 59.957 38.462 0.00 0.00 0.00 1.40
1785 2275 0.250640 AGAAGGGCAGCAGAGTTGTG 60.251 55.000 0.00 0.00 0.00 3.33
2130 2621 9.668497 ATCCTTTATTTGAGTTACTTGTACCTC 57.332 33.333 0.00 0.00 0.00 3.85
2331 2822 5.241728 GCTTCAAGTTGATACAAGAAACCCT 59.758 40.000 6.36 0.00 0.00 4.34
2431 2922 4.588899 TGGTGTTGTTTATGAGGAGGATG 58.411 43.478 0.00 0.00 0.00 3.51
2683 3357 6.704512 GAGATCTTTTCAATCTCCGCTATC 57.295 41.667 0.00 0.00 42.13 2.08
2725 3399 0.539518 GAAGCTCCTTCCCAGGTCTC 59.460 60.000 0.00 0.00 41.69 3.36
3261 3938 5.157770 TGATAGAAGACCCCTTACCATCT 57.842 43.478 0.00 0.00 31.62 2.90
3408 4085 4.541705 TGGAGGTTCTAGAGATGAAGGAG 58.458 47.826 0.00 0.00 0.00 3.69
3591 4270 1.450312 GCAGTGGCGGCATACTCTT 60.450 57.895 17.19 0.00 0.00 2.85
3609 4288 0.762418 TTCGGTGACATTGACCCTGT 59.238 50.000 0.00 0.00 0.00 4.00
3628 4307 6.113411 CCCTGTTGGTCTCGAAATTAGTATT 58.887 40.000 0.00 0.00 0.00 1.89
3631 4310 8.818057 CCTGTTGGTCTCGAAATTAGTATTTAG 58.182 37.037 0.00 0.00 34.16 1.85
3632 4311 8.712285 TGTTGGTCTCGAAATTAGTATTTAGG 57.288 34.615 0.00 0.00 34.16 2.69
3633 4312 7.279313 TGTTGGTCTCGAAATTAGTATTTAGGC 59.721 37.037 0.00 0.00 34.16 3.93
3634 4313 6.285990 TGGTCTCGAAATTAGTATTTAGGCC 58.714 40.000 0.00 0.00 35.80 5.19
3635 4314 5.404667 GGTCTCGAAATTAGTATTTAGGCCG 59.595 44.000 0.00 0.00 34.16 6.13
3636 4315 4.986659 TCTCGAAATTAGTATTTAGGCCGC 59.013 41.667 0.00 0.00 34.16 6.53
3637 4316 3.737266 TCGAAATTAGTATTTAGGCCGCG 59.263 43.478 0.00 0.00 34.16 6.46
3638 4317 3.663493 CGAAATTAGTATTTAGGCCGCGC 60.663 47.826 0.00 0.00 34.16 6.86
3639 4318 2.833631 ATTAGTATTTAGGCCGCGCT 57.166 45.000 5.56 0.00 0.00 5.92
3640 4319 2.607631 TTAGTATTTAGGCCGCGCTT 57.392 45.000 5.56 0.00 0.00 4.68
3641 4320 1.860676 TAGTATTTAGGCCGCGCTTG 58.139 50.000 5.56 0.00 0.00 4.01
3642 4321 0.814010 AGTATTTAGGCCGCGCTTGG 60.814 55.000 5.56 0.18 0.00 3.61
3643 4322 0.812412 GTATTTAGGCCGCGCTTGGA 60.812 55.000 5.56 0.00 0.00 3.53
3644 4323 0.107831 TATTTAGGCCGCGCTTGGAT 59.892 50.000 5.56 0.00 0.00 3.41
3645 4324 1.447317 ATTTAGGCCGCGCTTGGATG 61.447 55.000 5.56 0.00 0.00 3.51
3656 4335 1.668419 GCTTGGATGCGGTGTATTCT 58.332 50.000 0.00 0.00 0.00 2.40
3657 4336 2.833794 GCTTGGATGCGGTGTATTCTA 58.166 47.619 0.00 0.00 0.00 2.10
3658 4337 3.202906 GCTTGGATGCGGTGTATTCTAA 58.797 45.455 0.00 0.00 0.00 2.10
3659 4338 3.815401 GCTTGGATGCGGTGTATTCTAAT 59.185 43.478 0.00 0.00 0.00 1.73
3660 4339 4.994852 GCTTGGATGCGGTGTATTCTAATA 59.005 41.667 0.00 0.00 0.00 0.98
3661 4340 5.643777 GCTTGGATGCGGTGTATTCTAATAT 59.356 40.000 0.00 0.00 0.00 1.28
3662 4341 6.402550 GCTTGGATGCGGTGTATTCTAATATG 60.403 42.308 0.00 0.00 0.00 1.78
3663 4342 5.487433 TGGATGCGGTGTATTCTAATATGG 58.513 41.667 0.00 0.00 0.00 2.74
3664 4343 5.247337 TGGATGCGGTGTATTCTAATATGGA 59.753 40.000 0.00 0.00 0.00 3.41
3665 4344 6.070251 TGGATGCGGTGTATTCTAATATGGAT 60.070 38.462 0.00 0.00 0.00 3.41
3666 4345 6.258727 GGATGCGGTGTATTCTAATATGGATG 59.741 42.308 0.00 0.00 0.00 3.51
3667 4346 6.109156 TGCGGTGTATTCTAATATGGATGT 57.891 37.500 0.00 0.00 0.00 3.06
3668 4347 7.234661 TGCGGTGTATTCTAATATGGATGTA 57.765 36.000 0.00 0.00 0.00 2.29
3669 4348 7.847096 TGCGGTGTATTCTAATATGGATGTAT 58.153 34.615 0.00 0.00 0.00 2.29
3670 4349 8.318412 TGCGGTGTATTCTAATATGGATGTATT 58.682 33.333 0.00 0.00 0.00 1.89
3671 4350 9.162764 GCGGTGTATTCTAATATGGATGTATTT 57.837 33.333 0.00 0.00 0.00 1.40
3685 4364 7.764695 TGGATGTATTTATTCTACACGTGTG 57.235 36.000 30.83 19.61 32.24 3.82
3686 4365 7.324935 TGGATGTATTTATTCTACACGTGTGT 58.675 34.615 30.83 15.70 46.87 3.72
3687 4366 7.490079 TGGATGTATTTATTCTACACGTGTGTC 59.510 37.037 30.83 9.62 43.74 3.67
3688 4367 7.705325 GGATGTATTTATTCTACACGTGTGTCT 59.295 37.037 30.83 14.58 43.74 3.41
3689 4368 8.997621 ATGTATTTATTCTACACGTGTGTCTT 57.002 30.769 30.83 15.08 43.74 3.01
3691 4370 9.345517 TGTATTTATTCTACACGTGTGTCTTAC 57.654 33.333 30.83 18.59 43.74 2.34
3692 4371 7.823149 ATTTATTCTACACGTGTGTCTTACC 57.177 36.000 30.83 0.00 43.74 2.85
3693 4372 4.859304 ATTCTACACGTGTGTCTTACCA 57.141 40.909 30.83 7.42 43.74 3.25
3694 4373 3.909776 TCTACACGTGTGTCTTACCAG 57.090 47.619 30.83 17.03 43.74 4.00
3695 4374 2.030540 TCTACACGTGTGTCTTACCAGC 60.031 50.000 30.83 0.00 43.74 4.85
3696 4375 0.249741 ACACGTGTGTCTTACCAGCC 60.250 55.000 22.71 0.00 40.24 4.85
3697 4376 0.249699 CACGTGTGTCTTACCAGCCA 60.250 55.000 7.58 0.00 0.00 4.75
3698 4377 0.685097 ACGTGTGTCTTACCAGCCAT 59.315 50.000 0.00 0.00 0.00 4.40
3699 4378 1.078709 CGTGTGTCTTACCAGCCATG 58.921 55.000 0.00 0.00 0.00 3.66
3700 4379 1.337728 CGTGTGTCTTACCAGCCATGA 60.338 52.381 0.00 0.00 0.00 3.07
3701 4380 2.778299 GTGTGTCTTACCAGCCATGAA 58.222 47.619 0.00 0.00 0.00 2.57
3702 4381 2.484264 GTGTGTCTTACCAGCCATGAAC 59.516 50.000 0.00 0.00 0.00 3.18
3703 4382 2.105649 TGTGTCTTACCAGCCATGAACA 59.894 45.455 0.00 0.00 0.00 3.18
3704 4383 2.744202 GTGTCTTACCAGCCATGAACAG 59.256 50.000 0.00 0.00 0.00 3.16
3705 4384 2.637382 TGTCTTACCAGCCATGAACAGA 59.363 45.455 0.00 0.00 0.00 3.41
3706 4385 3.264193 TGTCTTACCAGCCATGAACAGAT 59.736 43.478 0.00 0.00 0.00 2.90
3707 4386 4.263462 TGTCTTACCAGCCATGAACAGATT 60.263 41.667 0.00 0.00 0.00 2.40
3708 4387 4.702131 GTCTTACCAGCCATGAACAGATTT 59.298 41.667 0.00 0.00 0.00 2.17
3709 4388 5.183904 GTCTTACCAGCCATGAACAGATTTT 59.816 40.000 0.00 0.00 0.00 1.82
3710 4389 5.415701 TCTTACCAGCCATGAACAGATTTTC 59.584 40.000 0.00 0.00 0.00 2.29
3711 4390 3.499338 ACCAGCCATGAACAGATTTTCA 58.501 40.909 0.00 0.00 39.79 2.69
3712 4391 3.508793 ACCAGCCATGAACAGATTTTCAG 59.491 43.478 0.00 0.00 38.87 3.02
3713 4392 3.508762 CAGCCATGAACAGATTTTCAGC 58.491 45.455 0.00 0.00 38.87 4.26
3714 4393 3.192844 CAGCCATGAACAGATTTTCAGCT 59.807 43.478 0.00 0.00 38.87 4.24
3715 4394 3.192844 AGCCATGAACAGATTTTCAGCTG 59.807 43.478 7.63 7.63 38.87 4.24
3716 4395 3.675228 GCCATGAACAGATTTTCAGCTGG 60.675 47.826 15.13 0.00 38.87 4.85
3717 4396 3.760151 CCATGAACAGATTTTCAGCTGGA 59.240 43.478 15.13 0.46 37.65 3.86
3718 4397 4.219070 CCATGAACAGATTTTCAGCTGGAA 59.781 41.667 15.13 9.08 37.65 3.53
3719 4398 5.279106 CCATGAACAGATTTTCAGCTGGAAA 60.279 40.000 22.30 22.30 43.59 3.13
3720 4399 5.186996 TGAACAGATTTTCAGCTGGAAAC 57.813 39.130 22.50 15.41 44.89 2.78
3721 4400 4.644234 TGAACAGATTTTCAGCTGGAAACA 59.356 37.500 22.50 11.74 44.89 2.83
3722 4401 5.126869 TGAACAGATTTTCAGCTGGAAACAA 59.873 36.000 22.50 0.56 44.89 2.83
3723 4402 5.596836 ACAGATTTTCAGCTGGAAACAAA 57.403 34.783 22.50 7.86 44.89 2.83
3724 4403 5.976458 ACAGATTTTCAGCTGGAAACAAAA 58.024 33.333 22.50 16.19 44.89 2.44
3725 4404 5.812127 ACAGATTTTCAGCTGGAAACAAAAC 59.188 36.000 22.50 11.24 44.89 2.43
3726 4405 5.043248 AGATTTTCAGCTGGAAACAAAACG 58.957 37.500 22.50 0.00 44.89 3.60
3727 4406 4.442375 TTTTCAGCTGGAAACAAAACGA 57.558 36.364 16.51 0.00 44.89 3.85
3728 4407 3.414549 TTCAGCTGGAAACAAAACGAC 57.585 42.857 15.13 0.00 42.06 4.34
3729 4408 1.329292 TCAGCTGGAAACAAAACGACG 59.671 47.619 15.13 0.00 42.06 5.12
3730 4409 1.329292 CAGCTGGAAACAAAACGACGA 59.671 47.619 5.57 0.00 42.06 4.20
3731 4410 1.597663 AGCTGGAAACAAAACGACGAG 59.402 47.619 0.00 0.00 42.06 4.18
3732 4411 1.920272 GCTGGAAACAAAACGACGAGC 60.920 52.381 0.00 0.00 42.06 5.03
3733 4412 1.329292 CTGGAAACAAAACGACGAGCA 59.671 47.619 0.00 0.00 42.06 4.26
3734 4413 1.329292 TGGAAACAAAACGACGAGCAG 59.671 47.619 0.00 0.00 37.44 4.24
3735 4414 1.595794 GGAAACAAAACGACGAGCAGA 59.404 47.619 0.00 0.00 0.00 4.26
3736 4415 2.348591 GGAAACAAAACGACGAGCAGAG 60.349 50.000 0.00 0.00 0.00 3.35
3737 4416 2.218953 AACAAAACGACGAGCAGAGA 57.781 45.000 0.00 0.00 0.00 3.10
3738 4417 1.488527 ACAAAACGACGAGCAGAGAC 58.511 50.000 0.00 0.00 0.00 3.36
3739 4418 0.784778 CAAAACGACGAGCAGAGACC 59.215 55.000 0.00 0.00 0.00 3.85
3740 4419 0.674534 AAAACGACGAGCAGAGACCT 59.325 50.000 0.00 0.00 0.00 3.85
3741 4420 0.039074 AAACGACGAGCAGAGACCTG 60.039 55.000 0.00 0.00 43.22 4.00
3742 4421 1.173444 AACGACGAGCAGAGACCTGT 61.173 55.000 0.00 0.00 42.35 4.00
3743 4422 1.154131 CGACGAGCAGAGACCTGTG 60.154 63.158 0.00 0.00 42.35 3.66
3744 4423 1.857318 CGACGAGCAGAGACCTGTGT 61.857 60.000 0.00 0.00 42.35 3.72
3745 4424 0.109504 GACGAGCAGAGACCTGTGTC 60.110 60.000 0.00 0.00 42.35 3.67
3757 4436 3.816994 GACCTGTGTCTTTTACAAGGGT 58.183 45.455 0.00 0.00 43.56 4.34
3758 4437 4.964593 GACCTGTGTCTTTTACAAGGGTA 58.035 43.478 0.00 0.00 42.02 3.69
3759 4438 5.557866 GACCTGTGTCTTTTACAAGGGTAT 58.442 41.667 0.00 0.00 42.02 2.73
3760 4439 5.948842 ACCTGTGTCTTTTACAAGGGTATT 58.051 37.500 0.00 0.00 40.94 1.89
3761 4440 6.370453 ACCTGTGTCTTTTACAAGGGTATTT 58.630 36.000 0.00 0.00 40.94 1.40
3762 4441 6.264518 ACCTGTGTCTTTTACAAGGGTATTTG 59.735 38.462 0.00 0.00 40.94 2.32
3763 4442 6.488683 CCTGTGTCTTTTACAAGGGTATTTGA 59.511 38.462 0.00 0.00 40.63 2.69
3764 4443 7.308589 CCTGTGTCTTTTACAAGGGTATTTGAG 60.309 40.741 0.00 0.00 40.63 3.02
3765 4444 7.284074 TGTGTCTTTTACAAGGGTATTTGAGA 58.716 34.615 0.00 0.00 40.63 3.27
3766 4445 7.227910 TGTGTCTTTTACAAGGGTATTTGAGAC 59.772 37.037 0.00 0.00 40.63 3.36
3767 4446 7.227910 GTGTCTTTTACAAGGGTATTTGAGACA 59.772 37.037 0.00 0.00 40.63 3.41
3768 4447 7.444183 TGTCTTTTACAAGGGTATTTGAGACAG 59.556 37.037 0.00 0.00 33.86 3.51
3769 4448 7.660208 GTCTTTTACAAGGGTATTTGAGACAGA 59.340 37.037 0.00 0.00 31.62 3.41
3770 4449 8.215050 TCTTTTACAAGGGTATTTGAGACAGAA 58.785 33.333 0.00 0.00 0.00 3.02
3771 4450 8.754991 TTTTACAAGGGTATTTGAGACAGAAA 57.245 30.769 0.00 0.00 0.00 2.52
3772 4451 7.739498 TTACAAGGGTATTTGAGACAGAAAC 57.261 36.000 0.00 0.00 0.00 2.78
3773 4452 4.755123 ACAAGGGTATTTGAGACAGAAACG 59.245 41.667 0.00 0.00 0.00 3.60
3774 4453 3.939066 AGGGTATTTGAGACAGAAACGG 58.061 45.455 0.00 0.00 0.00 4.44
3775 4454 3.326880 AGGGTATTTGAGACAGAAACGGT 59.673 43.478 0.00 0.00 0.00 4.83
3776 4455 4.529377 AGGGTATTTGAGACAGAAACGGTA 59.471 41.667 0.00 0.00 0.00 4.02
3777 4456 5.012354 AGGGTATTTGAGACAGAAACGGTAA 59.988 40.000 0.00 0.00 0.00 2.85
3778 4457 5.878669 GGGTATTTGAGACAGAAACGGTAAT 59.121 40.000 0.00 0.00 0.00 1.89
3779 4458 6.036844 GGGTATTTGAGACAGAAACGGTAATC 59.963 42.308 0.00 0.00 0.00 1.75
3780 4459 6.036844 GGTATTTGAGACAGAAACGGTAATCC 59.963 42.308 0.00 0.00 0.00 3.01
3781 4460 4.610605 TTGAGACAGAAACGGTAATCCA 57.389 40.909 0.00 0.00 0.00 3.41
3782 4461 4.610605 TGAGACAGAAACGGTAATCCAA 57.389 40.909 0.00 0.00 0.00 3.53
3783 4462 4.963373 TGAGACAGAAACGGTAATCCAAA 58.037 39.130 0.00 0.00 0.00 3.28
3784 4463 4.753107 TGAGACAGAAACGGTAATCCAAAC 59.247 41.667 0.00 0.00 0.00 2.93
3785 4464 4.710324 AGACAGAAACGGTAATCCAAACA 58.290 39.130 0.00 0.00 0.00 2.83
3786 4465 5.127491 AGACAGAAACGGTAATCCAAACAA 58.873 37.500 0.00 0.00 0.00 2.83
3787 4466 5.238650 AGACAGAAACGGTAATCCAAACAAG 59.761 40.000 0.00 0.00 0.00 3.16
3788 4467 4.277423 ACAGAAACGGTAATCCAAACAAGG 59.723 41.667 0.00 0.00 0.00 3.61
3789 4468 3.254903 AGAAACGGTAATCCAAACAAGGC 59.745 43.478 0.00 0.00 0.00 4.35
3790 4469 1.541379 ACGGTAATCCAAACAAGGCC 58.459 50.000 0.00 0.00 0.00 5.19
3791 4470 1.074889 ACGGTAATCCAAACAAGGCCT 59.925 47.619 0.00 0.00 0.00 5.19
3792 4471 2.306512 ACGGTAATCCAAACAAGGCCTA 59.693 45.455 5.16 0.00 0.00 3.93
3811 4490 2.841442 AAGCCACTCAACTACAGACC 57.159 50.000 0.00 0.00 0.00 3.85
3855 4534 4.304110 TCGTGTAACTTCACCTTCATGTC 58.696 43.478 0.00 0.00 35.18 3.06
3857 4536 4.150627 CGTGTAACTTCACCTTCATGTCTG 59.849 45.833 0.00 0.00 35.18 3.51
3868 4547 4.766891 ACCTTCATGTCTGTATTGGTTTGG 59.233 41.667 0.00 0.00 0.00 3.28
3873 4552 5.596361 TCATGTCTGTATTGGTTTGGTTGTT 59.404 36.000 0.00 0.00 0.00 2.83
3874 4553 6.773200 TCATGTCTGTATTGGTTTGGTTGTTA 59.227 34.615 0.00 0.00 0.00 2.41
3875 4554 7.450014 TCATGTCTGTATTGGTTTGGTTGTTAT 59.550 33.333 0.00 0.00 0.00 1.89
3876 4555 7.589958 TGTCTGTATTGGTTTGGTTGTTATT 57.410 32.000 0.00 0.00 0.00 1.40
3877 4556 7.653647 TGTCTGTATTGGTTTGGTTGTTATTC 58.346 34.615 0.00 0.00 0.00 1.75
3878 4557 7.504238 TGTCTGTATTGGTTTGGTTGTTATTCT 59.496 33.333 0.00 0.00 0.00 2.40
3879 4558 7.807907 GTCTGTATTGGTTTGGTTGTTATTCTG 59.192 37.037 0.00 0.00 0.00 3.02
3883 4562 5.195001 TGGTTTGGTTGTTATTCTGAAGC 57.805 39.130 0.00 0.00 0.00 3.86
3886 4565 5.634859 GGTTTGGTTGTTATTCTGAAGCATG 59.365 40.000 0.00 0.00 0.00 4.06
3887 4566 5.389859 TTGGTTGTTATTCTGAAGCATGG 57.610 39.130 0.00 0.00 0.00 3.66
3888 4567 4.406456 TGGTTGTTATTCTGAAGCATGGT 58.594 39.130 0.00 0.00 0.00 3.55
3889 4568 5.565509 TGGTTGTTATTCTGAAGCATGGTA 58.434 37.500 0.00 0.00 0.00 3.25
3891 4570 6.663093 TGGTTGTTATTCTGAAGCATGGTATT 59.337 34.615 0.00 0.00 0.00 1.89
3893 4572 6.942532 TGTTATTCTGAAGCATGGTATTCC 57.057 37.500 0.00 0.00 0.00 3.01
3908 4587 6.877668 TGGTATTCCAAATACTGTACCAGA 57.122 37.500 9.11 0.00 41.25 3.86
3909 4588 7.260387 TGGTATTCCAAATACTGTACCAGAA 57.740 36.000 9.11 0.00 41.25 3.02
3911 4590 7.773224 TGGTATTCCAAATACTGTACCAGAATG 59.227 37.037 9.11 0.00 41.25 2.67
3912 4591 7.990886 GGTATTCCAAATACTGTACCAGAATGA 59.009 37.037 9.11 0.00 39.69 2.57
3913 4592 9.391006 GTATTCCAAATACTGTACCAGAATGAA 57.609 33.333 11.44 0.00 39.69 2.57
3914 4593 8.877864 ATTCCAAATACTGTACCAGAATGAAA 57.122 30.769 0.00 0.00 39.69 2.69
3915 4594 8.877864 TTCCAAATACTGTACCAGAATGAAAT 57.122 30.769 0.00 0.00 39.69 2.17
3916 4595 9.967451 TTCCAAATACTGTACCAGAATGAAATA 57.033 29.630 0.00 0.00 39.69 1.40
3919 4598 9.669353 CAAATACTGTACCAGAATGAAATATGC 57.331 33.333 0.00 0.00 39.69 3.14
3920 4599 9.632638 AAATACTGTACCAGAATGAAATATGCT 57.367 29.630 0.00 0.00 39.69 3.79
3921 4600 9.632638 AATACTGTACCAGAATGAAATATGCTT 57.367 29.630 0.00 0.00 39.69 3.91
3922 4601 7.325660 ACTGTACCAGAATGAAATATGCTTG 57.674 36.000 0.00 0.00 39.69 4.01
3923 4602 6.886459 ACTGTACCAGAATGAAATATGCTTGT 59.114 34.615 0.00 0.00 39.69 3.16
3924 4603 7.066284 ACTGTACCAGAATGAAATATGCTTGTC 59.934 37.037 0.00 0.00 39.69 3.18
3925 4604 5.490139 ACCAGAATGAAATATGCTTGTCG 57.510 39.130 0.00 0.00 39.69 4.35
3926 4605 4.943705 ACCAGAATGAAATATGCTTGTCGT 59.056 37.500 0.00 0.00 39.69 4.34
3936 4615 6.887376 AATATGCTTGTCGTTACTACTGTG 57.113 37.500 0.00 0.00 0.00 3.66
3949 4628 6.019398 CGTTACTACTGTGTTTGTGATTGTGA 60.019 38.462 0.00 0.00 0.00 3.58
3951 4630 6.363577 ACTACTGTGTTTGTGATTGTGAAG 57.636 37.500 0.00 0.00 0.00 3.02
3965 4644 5.124297 TGATTGTGAAGCATGGTATTGTCTG 59.876 40.000 0.00 0.00 0.00 3.51
3981 4660 7.328493 GGTATTGTCTGTTTATTCTGGTTTTGC 59.672 37.037 0.00 0.00 0.00 3.68
3992 4671 3.892284 TCTGGTTTTGCCTGTGAGTTAA 58.108 40.909 0.00 0.00 37.45 2.01
3993 4672 4.274147 TCTGGTTTTGCCTGTGAGTTAAA 58.726 39.130 0.00 0.00 37.45 1.52
3994 4673 4.892934 TCTGGTTTTGCCTGTGAGTTAAAT 59.107 37.500 0.00 0.00 37.45 1.40
3995 4674 6.065374 TCTGGTTTTGCCTGTGAGTTAAATA 58.935 36.000 0.00 0.00 37.45 1.40
3996 4675 6.547880 TCTGGTTTTGCCTGTGAGTTAAATAA 59.452 34.615 0.00 0.00 37.45 1.40
3997 4676 6.508777 TGGTTTTGCCTGTGAGTTAAATAAC 58.491 36.000 0.00 0.00 38.35 1.89
3998 4677 6.096987 TGGTTTTGCCTGTGAGTTAAATAACA 59.903 34.615 6.13 0.00 37.09 2.41
3999 4678 6.981559 GGTTTTGCCTGTGAGTTAAATAACAA 59.018 34.615 6.13 0.00 38.62 2.83
4000 4679 7.169140 GGTTTTGCCTGTGAGTTAAATAACAAG 59.831 37.037 6.13 0.00 38.62 3.16
4001 4680 7.575414 TTTGCCTGTGAGTTAAATAACAAGA 57.425 32.000 6.13 0.00 38.62 3.02
4002 4681 6.554334 TGCCTGTGAGTTAAATAACAAGAC 57.446 37.500 6.13 0.76 38.62 3.01
4003 4682 6.058833 TGCCTGTGAGTTAAATAACAAGACA 58.941 36.000 6.13 4.63 38.62 3.41
4004 4683 6.714810 TGCCTGTGAGTTAAATAACAAGACAT 59.285 34.615 6.13 0.00 38.62 3.06
4005 4684 7.230510 TGCCTGTGAGTTAAATAACAAGACATT 59.769 33.333 6.13 0.00 38.62 2.71
4006 4685 8.082242 GCCTGTGAGTTAAATAACAAGACATTT 58.918 33.333 6.13 0.00 38.62 2.32
4007 4686 9.398170 CCTGTGAGTTAAATAACAAGACATTTG 57.602 33.333 6.13 0.00 38.62 2.32
4008 4687 8.795786 TGTGAGTTAAATAACAAGACATTTGC 57.204 30.769 6.13 0.00 38.62 3.68
4009 4688 8.409371 TGTGAGTTAAATAACAAGACATTTGCA 58.591 29.630 6.13 0.00 38.62 4.08
4010 4689 9.410556 GTGAGTTAAATAACAAGACATTTGCAT 57.589 29.630 6.13 0.00 38.62 3.96
4011 4690 9.409312 TGAGTTAAATAACAAGACATTTGCATG 57.591 29.630 6.13 0.00 38.62 4.06
4012 4691 9.624697 GAGTTAAATAACAAGACATTTGCATGA 57.375 29.630 0.00 0.00 38.62 3.07
4025 4704 3.512978 GCATGATTGCGTTTGGGTT 57.487 47.368 0.00 0.00 39.49 4.11
4026 4705 1.349234 GCATGATTGCGTTTGGGTTC 58.651 50.000 0.00 0.00 39.49 3.62
4027 4706 1.616620 CATGATTGCGTTTGGGTTCG 58.383 50.000 0.00 0.00 0.00 3.95
4028 4707 0.525761 ATGATTGCGTTTGGGTTCGG 59.474 50.000 0.00 0.00 0.00 4.30
4029 4708 0.535328 TGATTGCGTTTGGGTTCGGA 60.535 50.000 0.00 0.00 0.00 4.55
4030 4709 0.109919 GATTGCGTTTGGGTTCGGAC 60.110 55.000 0.00 0.00 0.00 4.79
4031 4710 1.520600 ATTGCGTTTGGGTTCGGACC 61.521 55.000 3.45 3.45 45.75 4.46
4032 4711 2.281276 GCGTTTGGGTTCGGACCT 60.281 61.111 13.96 0.00 45.75 3.85
4033 4712 1.895231 GCGTTTGGGTTCGGACCTT 60.895 57.895 13.96 0.00 45.75 3.50
4034 4713 1.449726 GCGTTTGGGTTCGGACCTTT 61.450 55.000 13.96 0.00 45.75 3.11
4035 4714 0.309612 CGTTTGGGTTCGGACCTTTG 59.690 55.000 13.96 0.00 45.75 2.77
4036 4715 1.395635 GTTTGGGTTCGGACCTTTGT 58.604 50.000 13.96 0.00 45.75 2.83
4037 4716 1.066454 GTTTGGGTTCGGACCTTTGTG 59.934 52.381 13.96 0.00 45.75 3.33
4038 4717 0.547075 TTGGGTTCGGACCTTTGTGA 59.453 50.000 13.96 0.00 45.75 3.58
4039 4718 0.768622 TGGGTTCGGACCTTTGTGAT 59.231 50.000 13.96 0.00 45.75 3.06
4040 4719 1.979308 TGGGTTCGGACCTTTGTGATA 59.021 47.619 13.96 0.00 45.75 2.15
4041 4720 2.574369 TGGGTTCGGACCTTTGTGATAT 59.426 45.455 13.96 0.00 45.75 1.63
4042 4721 3.009695 TGGGTTCGGACCTTTGTGATATT 59.990 43.478 13.96 0.00 45.75 1.28
4043 4722 3.377172 GGGTTCGGACCTTTGTGATATTG 59.623 47.826 13.96 0.00 45.75 1.90
4044 4723 3.181500 GGTTCGGACCTTTGTGATATTGC 60.181 47.826 5.31 0.00 42.99 3.56
4045 4724 2.276201 TCGGACCTTTGTGATATTGCG 58.724 47.619 0.00 0.00 0.00 4.85
4046 4725 2.006888 CGGACCTTTGTGATATTGCGT 58.993 47.619 0.00 0.00 0.00 5.24
4047 4726 3.119065 TCGGACCTTTGTGATATTGCGTA 60.119 43.478 0.00 0.00 0.00 4.42
4048 4727 3.807622 CGGACCTTTGTGATATTGCGTAT 59.192 43.478 0.00 0.00 0.00 3.06
4049 4728 4.084537 CGGACCTTTGTGATATTGCGTATC 60.085 45.833 2.80 2.80 39.76 2.24
4050 4729 4.814234 GGACCTTTGTGATATTGCGTATCA 59.186 41.667 7.35 7.35 45.32 2.15
4064 4743 0.320697 GTATCAGGTGATACCGGGGC 59.679 60.000 16.32 0.00 46.87 5.80
4065 4744 0.190069 TATCAGGTGATACCGGGGCT 59.810 55.000 6.32 0.00 44.90 5.19
4066 4745 0.694444 ATCAGGTGATACCGGGGCTT 60.694 55.000 6.32 0.00 44.90 4.35
4067 4746 0.031917 TCAGGTGATACCGGGGCTTA 60.032 55.000 6.32 0.00 44.90 3.09
4068 4747 0.834612 CAGGTGATACCGGGGCTTAA 59.165 55.000 6.32 0.00 44.90 1.85
4069 4748 1.210967 CAGGTGATACCGGGGCTTAAA 59.789 52.381 6.32 0.00 44.90 1.52
4070 4749 2.132686 AGGTGATACCGGGGCTTAAAT 58.867 47.619 6.32 0.00 44.90 1.40
4071 4750 2.158667 AGGTGATACCGGGGCTTAAATG 60.159 50.000 6.32 0.00 44.90 2.32
4072 4751 1.607148 GTGATACCGGGGCTTAAATGC 59.393 52.381 6.32 0.00 0.00 3.56
4073 4752 1.493022 TGATACCGGGGCTTAAATGCT 59.507 47.619 6.32 0.00 0.00 3.79
4074 4753 2.152016 GATACCGGGGCTTAAATGCTC 58.848 52.381 6.32 0.00 0.00 4.26
4080 4759 2.071778 GGGCTTAAATGCTCCCATGA 57.928 50.000 0.00 0.00 38.62 3.07
4081 4760 2.601905 GGGCTTAAATGCTCCCATGAT 58.398 47.619 0.00 0.00 38.62 2.45
4082 4761 2.298163 GGGCTTAAATGCTCCCATGATG 59.702 50.000 0.00 0.00 38.62 3.07
4083 4762 2.288640 GGCTTAAATGCTCCCATGATGC 60.289 50.000 0.00 0.00 0.00 3.91
4084 4763 2.626743 GCTTAAATGCTCCCATGATGCT 59.373 45.455 0.00 0.00 0.00 3.79
4085 4764 3.069158 GCTTAAATGCTCCCATGATGCTT 59.931 43.478 0.00 0.00 0.00 3.91
4086 4765 4.442472 GCTTAAATGCTCCCATGATGCTTT 60.442 41.667 0.00 0.00 0.00 3.51
4087 4766 3.814005 AAATGCTCCCATGATGCTTTC 57.186 42.857 0.00 0.00 0.00 2.62
4088 4767 2.447408 ATGCTCCCATGATGCTTTCA 57.553 45.000 0.00 0.00 39.12 2.69
4089 4768 2.219080 TGCTCCCATGATGCTTTCAA 57.781 45.000 0.00 0.00 38.03 2.69
4090 4769 1.820519 TGCTCCCATGATGCTTTCAAC 59.179 47.619 0.00 0.00 38.03 3.18
4091 4770 1.820519 GCTCCCATGATGCTTTCAACA 59.179 47.619 0.00 0.00 38.03 3.33
4092 4771 2.429610 GCTCCCATGATGCTTTCAACAT 59.570 45.455 0.00 0.00 38.03 2.71
4093 4772 3.118884 GCTCCCATGATGCTTTCAACATT 60.119 43.478 0.00 0.00 38.03 2.71
4094 4773 4.679662 CTCCCATGATGCTTTCAACATTC 58.320 43.478 0.00 0.00 38.03 2.67
4095 4774 4.346730 TCCCATGATGCTTTCAACATTCT 58.653 39.130 0.00 0.00 38.03 2.40
4096 4775 4.158949 TCCCATGATGCTTTCAACATTCTG 59.841 41.667 0.00 0.00 38.03 3.02
4097 4776 3.863424 CCATGATGCTTTCAACATTCTGC 59.137 43.478 0.00 0.00 38.03 4.26
4098 4777 4.490743 CATGATGCTTTCAACATTCTGCA 58.509 39.130 0.00 0.00 38.03 4.41
4099 4778 4.587584 TGATGCTTTCAACATTCTGCAA 57.412 36.364 0.00 0.00 34.07 4.08
4100 4779 4.946445 TGATGCTTTCAACATTCTGCAAA 58.054 34.783 0.00 0.00 34.07 3.68
4101 4780 5.358090 TGATGCTTTCAACATTCTGCAAAA 58.642 33.333 0.00 0.00 34.07 2.44
4102 4781 5.816258 TGATGCTTTCAACATTCTGCAAAAA 59.184 32.000 0.00 0.00 34.07 1.94
4124 4803 8.846943 AAAAAGACCTTTTGAAGTCAACAAAT 57.153 26.923 8.33 0.00 41.45 2.32
4125 4804 8.846943 AAAAGACCTTTTGAAGTCAACAAATT 57.153 26.923 6.92 0.00 40.84 1.82
4126 4805 7.832503 AAGACCTTTTGAAGTCAACAAATTG 57.167 32.000 0.00 0.00 37.15 2.32
4127 4806 5.812127 AGACCTTTTGAAGTCAACAAATTGC 59.188 36.000 0.00 0.00 37.15 3.56
4128 4807 5.486526 ACCTTTTGAAGTCAACAAATTGCA 58.513 33.333 0.00 0.00 37.15 4.08
4129 4808 5.936956 ACCTTTTGAAGTCAACAAATTGCAA 59.063 32.000 0.00 0.00 37.15 4.08
4130 4809 6.429385 ACCTTTTGAAGTCAACAAATTGCAAA 59.571 30.769 1.71 0.00 37.15 3.68
4131 4810 6.742264 CCTTTTGAAGTCAACAAATTGCAAAC 59.258 34.615 1.71 0.00 37.15 2.93
4132 4811 6.791887 TTTGAAGTCAACAAATTGCAAACA 57.208 29.167 1.71 0.00 35.28 2.83
4133 4812 6.791887 TTGAAGTCAACAAATTGCAAACAA 57.208 29.167 1.71 0.00 40.87 2.83
4134 4813 6.406093 TGAAGTCAACAAATTGCAAACAAG 57.594 33.333 1.71 0.00 39.69 3.16
4135 4814 5.931146 TGAAGTCAACAAATTGCAAACAAGT 59.069 32.000 1.71 0.00 39.69 3.16
4136 4815 7.093354 TGAAGTCAACAAATTGCAAACAAGTA 58.907 30.769 1.71 0.00 39.69 2.24
4137 4816 6.885735 AGTCAACAAATTGCAAACAAGTAC 57.114 33.333 1.71 0.00 39.69 2.73
4138 4817 5.514914 AGTCAACAAATTGCAAACAAGTACG 59.485 36.000 1.71 0.00 39.69 3.67
4139 4818 4.800993 TCAACAAATTGCAAACAAGTACGG 59.199 37.500 1.71 0.00 39.69 4.02
4140 4819 3.120041 ACAAATTGCAAACAAGTACGGC 58.880 40.909 1.71 0.00 39.69 5.68
4141 4820 3.119291 CAAATTGCAAACAAGTACGGCA 58.881 40.909 1.71 0.00 39.69 5.69
4142 4821 2.704725 ATTGCAAACAAGTACGGCAG 57.295 45.000 1.71 0.00 39.69 4.85
4143 4822 0.030101 TTGCAAACAAGTACGGCAGC 59.970 50.000 0.00 0.00 35.68 5.25
4144 4823 1.081442 GCAAACAAGTACGGCAGCC 60.081 57.895 0.00 0.00 0.00 4.85
4145 4824 1.515521 GCAAACAAGTACGGCAGCCT 61.516 55.000 10.54 0.00 0.00 4.58
4146 4825 0.951558 CAAACAAGTACGGCAGCCTT 59.048 50.000 10.54 1.81 0.00 4.35
4147 4826 1.336755 CAAACAAGTACGGCAGCCTTT 59.663 47.619 10.54 0.00 0.00 3.11
4148 4827 1.235724 AACAAGTACGGCAGCCTTTC 58.764 50.000 10.54 0.00 0.00 2.62
4149 4828 0.107831 ACAAGTACGGCAGCCTTTCA 59.892 50.000 10.54 0.00 0.00 2.69
4150 4829 0.798776 CAAGTACGGCAGCCTTTCAG 59.201 55.000 10.54 0.00 0.00 3.02
4151 4830 0.685097 AAGTACGGCAGCCTTTCAGA 59.315 50.000 10.54 0.00 0.00 3.27
4152 4831 0.905357 AGTACGGCAGCCTTTCAGAT 59.095 50.000 10.54 0.00 0.00 2.90
4153 4832 1.279271 AGTACGGCAGCCTTTCAGATT 59.721 47.619 10.54 0.00 0.00 2.40
4154 4833 1.666189 GTACGGCAGCCTTTCAGATTC 59.334 52.381 10.54 0.00 0.00 2.52
4155 4834 0.678048 ACGGCAGCCTTTCAGATTCC 60.678 55.000 10.54 0.00 0.00 3.01
4156 4835 0.393537 CGGCAGCCTTTCAGATTCCT 60.394 55.000 10.54 0.00 0.00 3.36
4157 4836 1.101331 GGCAGCCTTTCAGATTCCTG 58.899 55.000 3.29 0.00 41.74 3.86
4158 4837 1.101331 GCAGCCTTTCAGATTCCTGG 58.899 55.000 0.00 0.00 40.76 4.45
4159 4838 1.615384 GCAGCCTTTCAGATTCCTGGT 60.615 52.381 0.00 0.00 40.76 4.00
4160 4839 2.089980 CAGCCTTTCAGATTCCTGGTG 58.910 52.381 0.00 0.00 40.76 4.17
4161 4840 0.813821 GCCTTTCAGATTCCTGGTGC 59.186 55.000 0.00 0.00 40.76 5.01
4162 4841 1.467920 CCTTTCAGATTCCTGGTGCC 58.532 55.000 0.00 0.00 40.76 5.01
4163 4842 1.272092 CCTTTCAGATTCCTGGTGCCA 60.272 52.381 0.00 0.00 40.76 4.92
4164 4843 1.815003 CTTTCAGATTCCTGGTGCCAC 59.185 52.381 0.00 0.00 40.76 5.01
4165 4844 1.067295 TTCAGATTCCTGGTGCCACT 58.933 50.000 0.00 0.00 40.76 4.00
4166 4845 0.325933 TCAGATTCCTGGTGCCACTG 59.674 55.000 0.00 0.00 40.76 3.66
4167 4846 0.679002 CAGATTCCTGGTGCCACTGG 60.679 60.000 0.00 0.00 36.77 4.00
4192 4871 2.768344 CTCCGGTGGGCAGGGTAT 60.768 66.667 0.00 0.00 0.00 2.73
4193 4872 3.087253 TCCGGTGGGCAGGGTATG 61.087 66.667 0.00 0.00 0.00 2.39
4194 4873 4.189580 CCGGTGGGCAGGGTATGG 62.190 72.222 0.00 0.00 0.00 2.74
4211 4890 2.270850 GCACCCGCCATACCTTGA 59.729 61.111 0.00 0.00 0.00 3.02
4212 4891 1.152963 GCACCCGCCATACCTTGAT 60.153 57.895 0.00 0.00 0.00 2.57
4213 4892 0.751643 GCACCCGCCATACCTTGATT 60.752 55.000 0.00 0.00 0.00 2.57
4214 4893 1.762708 CACCCGCCATACCTTGATTT 58.237 50.000 0.00 0.00 0.00 2.17
4215 4894 2.099405 CACCCGCCATACCTTGATTTT 58.901 47.619 0.00 0.00 0.00 1.82
4216 4895 2.495669 CACCCGCCATACCTTGATTTTT 59.504 45.455 0.00 0.00 0.00 1.94
4217 4896 2.495669 ACCCGCCATACCTTGATTTTTG 59.504 45.455 0.00 0.00 0.00 2.44
4218 4897 2.159114 CCCGCCATACCTTGATTTTTGG 60.159 50.000 0.00 0.00 0.00 3.28
4219 4898 2.539476 CGCCATACCTTGATTTTTGGC 58.461 47.619 1.70 1.70 44.78 4.52
4220 4899 3.608316 GCCATACCTTGATTTTTGGCA 57.392 42.857 6.86 0.00 46.87 4.92
4221 4900 3.936564 GCCATACCTTGATTTTTGGCAA 58.063 40.909 6.86 0.00 46.87 4.52
4222 4901 4.322567 GCCATACCTTGATTTTTGGCAAA 58.677 39.130 8.93 8.93 46.87 3.68
4223 4902 4.759183 GCCATACCTTGATTTTTGGCAAAA 59.241 37.500 20.81 20.81 46.87 2.44
4224 4903 5.240403 GCCATACCTTGATTTTTGGCAAAAA 59.760 36.000 32.89 32.89 46.87 1.94
4258 4937 6.456501 ACCTATGTATCTATCGCTTTTGACC 58.543 40.000 0.00 0.00 0.00 4.02
4259 4938 6.267928 ACCTATGTATCTATCGCTTTTGACCT 59.732 38.462 0.00 0.00 0.00 3.85
4260 4939 6.587990 CCTATGTATCTATCGCTTTTGACCTG 59.412 42.308 0.00 0.00 0.00 4.00
4261 4940 4.693283 TGTATCTATCGCTTTTGACCTGG 58.307 43.478 0.00 0.00 0.00 4.45
4262 4941 4.404394 TGTATCTATCGCTTTTGACCTGGA 59.596 41.667 0.00 0.00 0.00 3.86
4263 4942 3.247006 TCTATCGCTTTTGACCTGGAC 57.753 47.619 0.00 0.00 0.00 4.02
4264 4943 2.565391 TCTATCGCTTTTGACCTGGACA 59.435 45.455 0.00 0.00 0.00 4.02
4265 4944 2.496899 ATCGCTTTTGACCTGGACAT 57.503 45.000 0.00 0.00 0.00 3.06
4266 4945 1.808411 TCGCTTTTGACCTGGACATC 58.192 50.000 0.00 0.00 0.00 3.06
4267 4946 0.443869 CGCTTTTGACCTGGACATCG 59.556 55.000 0.00 0.00 0.00 3.84
4268 4947 0.804989 GCTTTTGACCTGGACATCGG 59.195 55.000 0.00 0.00 0.00 4.18
4269 4948 0.804989 CTTTTGACCTGGACATCGGC 59.195 55.000 0.00 0.00 0.00 5.54
4270 4949 0.953471 TTTTGACCTGGACATCGGCG 60.953 55.000 0.00 0.00 0.00 6.46
4271 4950 3.950794 TTGACCTGGACATCGGCGC 62.951 63.158 0.00 0.00 0.00 6.53
4272 4951 4.148825 GACCTGGACATCGGCGCT 62.149 66.667 7.64 0.00 0.00 5.92
4273 4952 4.148825 ACCTGGACATCGGCGCTC 62.149 66.667 7.64 0.00 0.00 5.03
4299 4978 3.109240 GAGAGCCTCGACGTACCC 58.891 66.667 0.00 0.00 0.00 3.69
4300 4979 2.439883 AGAGCCTCGACGTACCCC 60.440 66.667 0.00 0.00 0.00 4.95
4301 4980 2.753043 GAGCCTCGACGTACCCCA 60.753 66.667 0.00 0.00 0.00 4.96
4302 4981 3.061260 GAGCCTCGACGTACCCCAC 62.061 68.421 0.00 0.00 0.00 4.61
4303 4982 3.066814 GCCTCGACGTACCCCACT 61.067 66.667 0.00 0.00 0.00 4.00
4304 4983 2.882876 CCTCGACGTACCCCACTG 59.117 66.667 0.00 0.00 0.00 3.66
4305 4984 2.707849 CCTCGACGTACCCCACTGG 61.708 68.421 0.00 0.00 41.37 4.00
4306 4985 3.352338 CTCGACGTACCCCACTGGC 62.352 68.421 0.00 0.00 37.83 4.85
4307 4986 4.446413 CGACGTACCCCACTGGCC 62.446 72.222 0.00 0.00 37.83 5.36
4308 4987 4.091939 GACGTACCCCACTGGCCC 62.092 72.222 0.00 0.00 37.83 5.80
4309 4988 4.966274 ACGTACCCCACTGGCCCA 62.966 66.667 0.00 0.00 37.83 5.36
4310 4989 4.404098 CGTACCCCACTGGCCCAC 62.404 72.222 0.00 0.00 37.83 4.61
4311 4990 2.933834 GTACCCCACTGGCCCACT 60.934 66.667 0.00 0.00 37.83 4.00
4312 4991 2.609610 TACCCCACTGGCCCACTC 60.610 66.667 0.00 0.00 37.83 3.51
4313 4992 3.492457 TACCCCACTGGCCCACTCA 62.492 63.158 0.00 0.00 37.83 3.41
4314 4993 4.039092 CCCCACTGGCCCACTCAG 62.039 72.222 0.00 0.00 38.16 3.35
4315 4994 2.930019 CCCACTGGCCCACTCAGA 60.930 66.667 0.00 0.00 36.22 3.27
4316 4995 2.348998 CCACTGGCCCACTCAGAC 59.651 66.667 0.00 0.00 36.22 3.51
4317 4996 2.348998 CACTGGCCCACTCAGACC 59.651 66.667 0.00 0.00 36.22 3.85
4318 4997 2.930562 ACTGGCCCACTCAGACCC 60.931 66.667 0.00 0.00 36.22 4.46
4319 4998 2.930019 CTGGCCCACTCAGACCCA 60.930 66.667 0.00 0.00 34.36 4.51
4320 4999 3.249189 TGGCCCACTCAGACCCAC 61.249 66.667 0.00 0.00 0.00 4.61
4321 5000 4.035102 GGCCCACTCAGACCCACC 62.035 72.222 0.00 0.00 0.00 4.61
4322 5001 3.249189 GCCCACTCAGACCCACCA 61.249 66.667 0.00 0.00 0.00 4.17
4323 5002 2.829384 GCCCACTCAGACCCACCAA 61.829 63.158 0.00 0.00 0.00 3.67
4324 5003 1.073199 CCCACTCAGACCCACCAAC 59.927 63.158 0.00 0.00 0.00 3.77
4325 5004 1.301716 CCACTCAGACCCACCAACG 60.302 63.158 0.00 0.00 0.00 4.10
4326 5005 1.961277 CACTCAGACCCACCAACGC 60.961 63.158 0.00 0.00 0.00 4.84
4327 5006 2.738521 CTCAGACCCACCAACGCG 60.739 66.667 3.53 3.53 0.00 6.01
4328 5007 4.980805 TCAGACCCACCAACGCGC 62.981 66.667 5.73 0.00 0.00 6.86
4349 5028 3.897122 GCACCCACCCAGACCCAA 61.897 66.667 0.00 0.00 0.00 4.12
4350 5029 2.931107 CACCCACCCAGACCCAAA 59.069 61.111 0.00 0.00 0.00 3.28
4351 5030 1.530655 CACCCACCCAGACCCAAAC 60.531 63.158 0.00 0.00 0.00 2.93
4352 5031 2.282180 CCCACCCAGACCCAAACG 60.282 66.667 0.00 0.00 0.00 3.60
4353 5032 2.983592 CCACCCAGACCCAAACGC 60.984 66.667 0.00 0.00 0.00 4.84
4354 5033 3.353836 CACCCAGACCCAAACGCG 61.354 66.667 3.53 3.53 0.00 6.01
4355 5034 3.552384 ACCCAGACCCAAACGCGA 61.552 61.111 15.93 0.00 0.00 5.87
4356 5035 3.047877 CCCAGACCCAAACGCGAC 61.048 66.667 15.93 0.00 0.00 5.19
4357 5036 2.280524 CCAGACCCAAACGCGACA 60.281 61.111 15.93 0.00 0.00 4.35
4358 5037 2.317609 CCAGACCCAAACGCGACAG 61.318 63.158 15.93 0.46 0.00 3.51
4359 5038 1.594293 CAGACCCAAACGCGACAGT 60.594 57.895 15.93 1.86 0.00 3.55
4360 5039 1.594293 AGACCCAAACGCGACAGTG 60.594 57.895 15.93 4.50 0.00 3.66
4361 5040 3.236618 GACCCAAACGCGACAGTGC 62.237 63.158 15.93 0.00 0.00 4.40
4369 5048 4.961511 GCGACAGTGCGACACCCA 62.962 66.667 10.49 0.00 34.49 4.51
4370 5049 3.036084 CGACAGTGCGACACCCAC 61.036 66.667 6.39 0.00 34.49 4.61
4371 5050 2.665185 GACAGTGCGACACCCACC 60.665 66.667 6.39 0.00 34.49 4.61
4372 5051 4.250305 ACAGTGCGACACCCACCC 62.250 66.667 6.39 0.00 34.49 4.61
4373 5052 4.248842 CAGTGCGACACCCACCCA 62.249 66.667 6.39 0.00 34.49 4.51
4374 5053 3.484806 AGTGCGACACCCACCCAA 61.485 61.111 6.39 0.00 34.49 4.12
4375 5054 2.517402 GTGCGACACCCACCCAAA 60.517 61.111 0.00 0.00 0.00 3.28
4376 5055 2.517402 TGCGACACCCACCCAAAC 60.517 61.111 0.00 0.00 0.00 2.93
4377 5056 3.292159 GCGACACCCACCCAAACC 61.292 66.667 0.00 0.00 0.00 3.27
4378 5057 2.513895 CGACACCCACCCAAACCT 59.486 61.111 0.00 0.00 0.00 3.50
4379 5058 1.756024 CGACACCCACCCAAACCTA 59.244 57.895 0.00 0.00 0.00 3.08
4380 5059 0.321298 CGACACCCACCCAAACCTAG 60.321 60.000 0.00 0.00 0.00 3.02
4381 5060 0.608308 GACACCCACCCAAACCTAGC 60.608 60.000 0.00 0.00 0.00 3.42
4382 5061 1.674322 CACCCACCCAAACCTAGCG 60.674 63.158 0.00 0.00 0.00 4.26
4383 5062 2.750237 CCCACCCAAACCTAGCGC 60.750 66.667 0.00 0.00 0.00 5.92
4384 5063 3.124921 CCACCCAAACCTAGCGCG 61.125 66.667 0.00 0.00 0.00 6.86
4385 5064 3.124921 CACCCAAACCTAGCGCGG 61.125 66.667 8.83 0.00 0.00 6.46
4473 5152 3.984732 GGGGCTTGGAGGGCTGTT 61.985 66.667 0.00 0.00 0.00 3.16
4474 5153 2.677875 GGGCTTGGAGGGCTGTTG 60.678 66.667 0.00 0.00 0.00 3.33
4475 5154 3.376918 GGCTTGGAGGGCTGTTGC 61.377 66.667 0.00 0.00 38.76 4.17
4476 5155 2.598394 GCTTGGAGGGCTGTTGCA 60.598 61.111 0.00 0.00 41.91 4.08
4477 5156 2.924105 GCTTGGAGGGCTGTTGCAC 61.924 63.158 0.00 0.00 44.43 4.57
4486 5165 4.332637 CTGTTGCACAGCGGCACC 62.333 66.667 1.45 0.00 44.86 5.01
4487 5166 4.873810 TGTTGCACAGCGGCACCT 62.874 61.111 1.45 0.00 44.86 4.00
4488 5167 3.595758 GTTGCACAGCGGCACCTT 61.596 61.111 1.45 0.00 44.86 3.50
4489 5168 3.286751 TTGCACAGCGGCACCTTC 61.287 61.111 1.45 0.00 44.86 3.46
4490 5169 4.560743 TGCACAGCGGCACCTTCA 62.561 61.111 1.45 0.00 39.25 3.02
4491 5170 3.730761 GCACAGCGGCACCTTCAG 61.731 66.667 1.45 0.00 0.00 3.02
4492 5171 3.730761 CACAGCGGCACCTTCAGC 61.731 66.667 1.45 0.00 0.00 4.26
4555 5234 3.570638 CTCCAGCGGCGCATCAAG 61.571 66.667 35.02 20.39 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
89 103 9.515226 ACTCACCAGTCAGCTTATTTATAAAAA 57.485 29.630 1.21 0.00 0.00 1.94
194 211 1.882623 CACCAGCCCTTGAGAAACTTC 59.117 52.381 0.00 0.00 0.00 3.01
256 727 6.092807 GCTCAGGTCTGTTAAAGTTTCTATGG 59.907 42.308 0.00 0.00 0.00 2.74
282 753 2.259917 TCTGATGAGAAGCACTCCCAA 58.740 47.619 8.13 0.00 44.34 4.12
326 800 1.808945 CCGCTGCTTTGTTGAGAAGAT 59.191 47.619 0.00 0.00 0.00 2.40
425 900 3.503748 GTGGTTGGGAGAACAAGAAGATG 59.496 47.826 0.00 0.00 0.00 2.90
486 961 6.608002 TGGGTATTTGAGTAGTTTGGTTTTGT 59.392 34.615 0.00 0.00 0.00 2.83
615 1095 3.806949 AGGTGCTATTTCCTCCAAACA 57.193 42.857 0.00 0.00 0.00 2.83
650 1130 6.258160 CCAAGCATATTAAGGAACAACGAAG 58.742 40.000 0.00 0.00 0.00 3.79
841 1327 2.115052 ACAACCTCGGCCATTGCA 59.885 55.556 2.24 0.00 40.13 4.08
1037 1526 7.067859 CCCAGATTTCATATGTCTGATTGTTGT 59.932 37.037 18.65 0.00 41.38 3.32
1072 1561 6.893554 TCAATCCCATGAACAAAGATTCTCAT 59.106 34.615 0.00 0.00 0.00 2.90
1080 1569 4.081406 TGTCCTCAATCCCATGAACAAAG 58.919 43.478 0.00 0.00 0.00 2.77
1785 2275 0.322816 TGCCTTCCCTGCTTGTGATC 60.323 55.000 0.00 0.00 0.00 2.92
2130 2621 5.432885 AACAACTTTTCAAGTATGTCGGG 57.567 39.130 0.00 0.00 41.91 5.14
2331 2822 7.120051 TCCGGAATGATTTTATCCTACCAAAA 58.880 34.615 0.00 0.00 0.00 2.44
2469 2960 7.029563 CCTTCTTCATTTTGTGTATTACCAGC 58.970 38.462 0.00 0.00 0.00 4.85
2683 3357 0.817634 TTTGAACCACGCAGACCCAG 60.818 55.000 0.00 0.00 0.00 4.45
3163 3837 0.615331 GGAGACTCTCCCAATGTGCA 59.385 55.000 13.65 0.00 44.36 4.57
3591 4270 0.762418 AACAGGGTCAATGTCACCGA 59.238 50.000 0.00 0.00 34.33 4.69
3609 4288 6.764560 GGCCTAAATACTAATTTCGAGACCAA 59.235 38.462 0.00 0.00 36.67 3.67
3613 4292 4.986659 GCGGCCTAAATACTAATTTCGAGA 59.013 41.667 0.00 0.00 36.67 4.04
3622 4301 1.539496 CCAAGCGCGGCCTAAATACTA 60.539 52.381 8.83 0.00 0.00 1.82
3628 4307 2.513666 CATCCAAGCGCGGCCTAA 60.514 61.111 8.83 0.00 0.00 2.69
3637 4316 1.668419 AGAATACACCGCATCCAAGC 58.332 50.000 0.00 0.00 0.00 4.01
3638 4317 6.092670 CCATATTAGAATACACCGCATCCAAG 59.907 42.308 0.00 0.00 0.00 3.61
3639 4318 5.937540 CCATATTAGAATACACCGCATCCAA 59.062 40.000 0.00 0.00 0.00 3.53
3640 4319 5.247337 TCCATATTAGAATACACCGCATCCA 59.753 40.000 0.00 0.00 0.00 3.41
3641 4320 5.730550 TCCATATTAGAATACACCGCATCC 58.269 41.667 0.00 0.00 0.00 3.51
3642 4321 6.818644 ACATCCATATTAGAATACACCGCATC 59.181 38.462 0.00 0.00 0.00 3.91
3643 4322 6.711277 ACATCCATATTAGAATACACCGCAT 58.289 36.000 0.00 0.00 0.00 4.73
3644 4323 6.109156 ACATCCATATTAGAATACACCGCA 57.891 37.500 0.00 0.00 0.00 5.69
3645 4324 8.718102 AATACATCCATATTAGAATACACCGC 57.282 34.615 0.00 0.00 0.00 5.68
3659 4338 9.471084 CACACGTGTAGAATAAATACATCCATA 57.529 33.333 22.90 0.00 35.69 2.74
3660 4339 7.985184 ACACACGTGTAGAATAAATACATCCAT 59.015 33.333 22.90 0.00 42.90 3.41
3661 4340 7.324935 ACACACGTGTAGAATAAATACATCCA 58.675 34.615 22.90 0.00 42.90 3.41
3662 4341 7.705325 AGACACACGTGTAGAATAAATACATCC 59.295 37.037 22.90 0.00 45.05 3.51
3663 4342 8.630278 AGACACACGTGTAGAATAAATACATC 57.370 34.615 22.90 5.62 45.05 3.06
3664 4343 8.997621 AAGACACACGTGTAGAATAAATACAT 57.002 30.769 22.90 0.00 45.05 2.29
3665 4344 9.345517 GTAAGACACACGTGTAGAATAAATACA 57.654 33.333 22.90 0.00 45.05 2.29
3666 4345 8.801913 GGTAAGACACACGTGTAGAATAAATAC 58.198 37.037 22.90 14.81 45.05 1.89
3667 4346 8.522003 TGGTAAGACACACGTGTAGAATAAATA 58.478 33.333 22.90 4.22 45.05 1.40
3668 4347 7.380536 TGGTAAGACACACGTGTAGAATAAAT 58.619 34.615 22.90 5.17 45.05 1.40
3669 4348 6.747125 TGGTAAGACACACGTGTAGAATAAA 58.253 36.000 22.90 1.11 45.05 1.40
3670 4349 6.330004 TGGTAAGACACACGTGTAGAATAA 57.670 37.500 22.90 2.71 45.05 1.40
3671 4350 5.620654 GCTGGTAAGACACACGTGTAGAATA 60.621 44.000 22.90 9.88 45.05 1.75
3672 4351 4.806330 CTGGTAAGACACACGTGTAGAAT 58.194 43.478 22.90 10.90 45.05 2.40
3673 4352 3.551454 GCTGGTAAGACACACGTGTAGAA 60.551 47.826 22.90 2.50 45.05 2.10
3674 4353 2.030540 GCTGGTAAGACACACGTGTAGA 60.031 50.000 22.90 1.85 45.05 2.59
3675 4354 2.325761 GCTGGTAAGACACACGTGTAG 58.674 52.381 22.90 17.57 45.05 2.74
3676 4355 1.000060 GGCTGGTAAGACACACGTGTA 60.000 52.381 22.90 1.65 45.05 2.90
3677 4356 4.187689 ATGGCTGGTAAGACACACGTGT 62.188 50.000 17.22 17.22 46.98 4.49
3678 4357 0.249699 TGGCTGGTAAGACACACGTG 60.250 55.000 15.48 15.48 36.11 4.49
3679 4358 0.685097 ATGGCTGGTAAGACACACGT 59.315 50.000 0.00 0.00 46.98 4.49
3680 4359 1.078709 CATGGCTGGTAAGACACACG 58.921 55.000 0.00 0.00 46.98 4.49
3681 4360 2.472695 TCATGGCTGGTAAGACACAC 57.527 50.000 0.00 0.00 46.98 3.82
3682 4361 2.105649 TGTTCATGGCTGGTAAGACACA 59.894 45.455 0.00 0.00 46.98 3.72
3683 4362 2.744202 CTGTTCATGGCTGGTAAGACAC 59.256 50.000 0.00 0.00 46.98 3.67
3685 4364 3.334583 TCTGTTCATGGCTGGTAAGAC 57.665 47.619 0.00 0.00 0.00 3.01
3686 4365 4.574674 AATCTGTTCATGGCTGGTAAGA 57.425 40.909 0.00 0.00 0.00 2.10
3687 4366 5.183713 TGAAAATCTGTTCATGGCTGGTAAG 59.816 40.000 0.00 0.00 32.56 2.34
3688 4367 5.076182 TGAAAATCTGTTCATGGCTGGTAA 58.924 37.500 0.00 0.00 32.56 2.85
3689 4368 4.661222 TGAAAATCTGTTCATGGCTGGTA 58.339 39.130 0.00 0.00 32.56 3.25
3690 4369 3.499338 TGAAAATCTGTTCATGGCTGGT 58.501 40.909 0.00 0.00 32.56 4.00
3691 4370 3.675228 GCTGAAAATCTGTTCATGGCTGG 60.675 47.826 0.00 0.00 36.92 4.85
3692 4371 3.192844 AGCTGAAAATCTGTTCATGGCTG 59.807 43.478 0.00 0.00 37.53 4.85
3693 4372 3.192844 CAGCTGAAAATCTGTTCATGGCT 59.807 43.478 8.42 0.00 38.73 4.75
3694 4373 3.508762 CAGCTGAAAATCTGTTCATGGC 58.491 45.455 8.42 0.00 36.92 4.40
3695 4374 3.760151 TCCAGCTGAAAATCTGTTCATGG 59.240 43.478 17.39 0.00 38.33 3.66
3696 4375 5.381174 TTCCAGCTGAAAATCTGTTCATG 57.619 39.130 17.39 0.00 36.92 3.07
3697 4376 5.302568 TGTTTCCAGCTGAAAATCTGTTCAT 59.697 36.000 17.39 0.00 44.30 2.57
3698 4377 4.644234 TGTTTCCAGCTGAAAATCTGTTCA 59.356 37.500 17.39 0.00 44.30 3.18
3699 4378 5.186996 TGTTTCCAGCTGAAAATCTGTTC 57.813 39.130 17.39 0.00 44.30 3.18
3700 4379 5.596836 TTGTTTCCAGCTGAAAATCTGTT 57.403 34.783 17.39 0.00 44.30 3.16
3701 4380 5.596836 TTTGTTTCCAGCTGAAAATCTGT 57.403 34.783 17.39 0.00 44.30 3.41
3702 4381 5.051508 CGTTTTGTTTCCAGCTGAAAATCTG 60.052 40.000 17.39 4.53 44.30 2.90
3703 4382 5.043248 CGTTTTGTTTCCAGCTGAAAATCT 58.957 37.500 17.39 0.00 44.30 2.40
3704 4383 5.040635 TCGTTTTGTTTCCAGCTGAAAATC 58.959 37.500 17.39 8.85 44.30 2.17
3705 4384 4.803613 GTCGTTTTGTTTCCAGCTGAAAAT 59.196 37.500 17.39 0.00 44.30 1.82
3706 4385 4.170256 GTCGTTTTGTTTCCAGCTGAAAA 58.830 39.130 17.39 4.03 44.30 2.29
3707 4386 3.729462 CGTCGTTTTGTTTCCAGCTGAAA 60.729 43.478 17.39 11.04 40.64 2.69
3708 4387 2.223157 CGTCGTTTTGTTTCCAGCTGAA 60.223 45.455 17.39 4.81 0.00 3.02
3709 4388 1.329292 CGTCGTTTTGTTTCCAGCTGA 59.671 47.619 17.39 0.00 0.00 4.26
3710 4389 1.329292 TCGTCGTTTTGTTTCCAGCTG 59.671 47.619 6.78 6.78 0.00 4.24
3711 4390 1.597663 CTCGTCGTTTTGTTTCCAGCT 59.402 47.619 0.00 0.00 0.00 4.24
3712 4391 1.920272 GCTCGTCGTTTTGTTTCCAGC 60.920 52.381 0.00 0.00 0.00 4.85
3713 4392 1.329292 TGCTCGTCGTTTTGTTTCCAG 59.671 47.619 0.00 0.00 0.00 3.86
3714 4393 1.329292 CTGCTCGTCGTTTTGTTTCCA 59.671 47.619 0.00 0.00 0.00 3.53
3715 4394 1.595794 TCTGCTCGTCGTTTTGTTTCC 59.404 47.619 0.00 0.00 0.00 3.13
3716 4395 2.538449 TCTCTGCTCGTCGTTTTGTTTC 59.462 45.455 0.00 0.00 0.00 2.78
3717 4396 2.284417 GTCTCTGCTCGTCGTTTTGTTT 59.716 45.455 0.00 0.00 0.00 2.83
3718 4397 1.859080 GTCTCTGCTCGTCGTTTTGTT 59.141 47.619 0.00 0.00 0.00 2.83
3719 4398 1.488527 GTCTCTGCTCGTCGTTTTGT 58.511 50.000 0.00 0.00 0.00 2.83
3720 4399 0.784778 GGTCTCTGCTCGTCGTTTTG 59.215 55.000 0.00 0.00 0.00 2.44
3721 4400 0.674534 AGGTCTCTGCTCGTCGTTTT 59.325 50.000 0.00 0.00 0.00 2.43
3722 4401 0.039074 CAGGTCTCTGCTCGTCGTTT 60.039 55.000 0.00 0.00 33.86 3.60
3723 4402 1.173444 ACAGGTCTCTGCTCGTCGTT 61.173 55.000 0.00 0.00 44.59 3.85
3724 4403 1.601197 ACAGGTCTCTGCTCGTCGT 60.601 57.895 0.00 0.00 44.59 4.34
3725 4404 1.154131 CACAGGTCTCTGCTCGTCG 60.154 63.158 0.00 0.00 44.59 5.12
3726 4405 0.109504 GACACAGGTCTCTGCTCGTC 60.110 60.000 0.00 0.00 44.59 4.20
3727 4406 1.960612 GACACAGGTCTCTGCTCGT 59.039 57.895 0.00 0.00 44.59 4.18
3728 4407 4.878774 GACACAGGTCTCTGCTCG 57.121 61.111 0.00 0.00 44.59 5.03
3736 4415 3.816994 ACCCTTGTAAAAGACACAGGTC 58.183 45.455 0.00 0.00 38.72 3.85
3737 4416 3.945640 ACCCTTGTAAAAGACACAGGT 57.054 42.857 0.00 0.00 38.39 4.00
3738 4417 6.488683 TCAAATACCCTTGTAAAAGACACAGG 59.511 38.462 0.00 0.00 37.96 4.00
3739 4418 7.444183 TCTCAAATACCCTTGTAAAAGACACAG 59.556 37.037 0.00 0.00 37.96 3.66
3740 4419 7.227910 GTCTCAAATACCCTTGTAAAAGACACA 59.772 37.037 0.00 0.00 37.96 3.72
3741 4420 7.227910 TGTCTCAAATACCCTTGTAAAAGACAC 59.772 37.037 0.00 0.00 37.96 3.67
3742 4421 7.284074 TGTCTCAAATACCCTTGTAAAAGACA 58.716 34.615 0.00 0.00 35.29 3.41
3743 4422 7.660208 TCTGTCTCAAATACCCTTGTAAAAGAC 59.340 37.037 0.00 0.00 32.02 3.01
3744 4423 7.741785 TCTGTCTCAAATACCCTTGTAAAAGA 58.258 34.615 0.00 0.00 0.00 2.52
3745 4424 7.979444 TCTGTCTCAAATACCCTTGTAAAAG 57.021 36.000 0.00 0.00 0.00 2.27
3746 4425 8.626526 GTTTCTGTCTCAAATACCCTTGTAAAA 58.373 33.333 0.00 0.00 0.00 1.52
3747 4426 7.041644 CGTTTCTGTCTCAAATACCCTTGTAAA 60.042 37.037 0.00 0.00 0.00 2.01
3748 4427 6.425721 CGTTTCTGTCTCAAATACCCTTGTAA 59.574 38.462 0.00 0.00 0.00 2.41
3749 4428 5.929992 CGTTTCTGTCTCAAATACCCTTGTA 59.070 40.000 0.00 0.00 0.00 2.41
3750 4429 4.755123 CGTTTCTGTCTCAAATACCCTTGT 59.245 41.667 0.00 0.00 0.00 3.16
3751 4430 4.154195 CCGTTTCTGTCTCAAATACCCTTG 59.846 45.833 0.00 0.00 0.00 3.61
3752 4431 4.202430 ACCGTTTCTGTCTCAAATACCCTT 60.202 41.667 0.00 0.00 0.00 3.95
3753 4432 3.326880 ACCGTTTCTGTCTCAAATACCCT 59.673 43.478 0.00 0.00 0.00 4.34
3754 4433 3.671716 ACCGTTTCTGTCTCAAATACCC 58.328 45.455 0.00 0.00 0.00 3.69
3755 4434 6.036844 GGATTACCGTTTCTGTCTCAAATACC 59.963 42.308 0.00 0.00 0.00 2.73
3756 4435 6.592607 TGGATTACCGTTTCTGTCTCAAATAC 59.407 38.462 0.00 0.00 39.42 1.89
3757 4436 6.703319 TGGATTACCGTTTCTGTCTCAAATA 58.297 36.000 0.00 0.00 39.42 1.40
3758 4437 5.556915 TGGATTACCGTTTCTGTCTCAAAT 58.443 37.500 0.00 0.00 39.42 2.32
3759 4438 4.963373 TGGATTACCGTTTCTGTCTCAAA 58.037 39.130 0.00 0.00 39.42 2.69
3760 4439 4.610605 TGGATTACCGTTTCTGTCTCAA 57.389 40.909 0.00 0.00 39.42 3.02
3761 4440 4.610605 TTGGATTACCGTTTCTGTCTCA 57.389 40.909 0.00 0.00 39.42 3.27
3762 4441 4.753107 TGTTTGGATTACCGTTTCTGTCTC 59.247 41.667 0.00 0.00 39.42 3.36
3763 4442 4.710324 TGTTTGGATTACCGTTTCTGTCT 58.290 39.130 0.00 0.00 39.42 3.41
3764 4443 5.427036 TTGTTTGGATTACCGTTTCTGTC 57.573 39.130 0.00 0.00 39.42 3.51
3765 4444 4.277423 CCTTGTTTGGATTACCGTTTCTGT 59.723 41.667 0.00 0.00 39.42 3.41
3766 4445 4.794169 CCTTGTTTGGATTACCGTTTCTG 58.206 43.478 0.00 0.00 39.42 3.02
3767 4446 3.254903 GCCTTGTTTGGATTACCGTTTCT 59.745 43.478 0.00 0.00 39.42 2.52
3768 4447 3.571571 GCCTTGTTTGGATTACCGTTTC 58.428 45.455 0.00 0.00 39.42 2.78
3769 4448 2.297880 GGCCTTGTTTGGATTACCGTTT 59.702 45.455 0.00 0.00 39.42 3.60
3770 4449 1.890489 GGCCTTGTTTGGATTACCGTT 59.110 47.619 0.00 0.00 39.42 4.44
3771 4450 1.074889 AGGCCTTGTTTGGATTACCGT 59.925 47.619 0.00 0.00 39.42 4.83
3772 4451 1.834188 AGGCCTTGTTTGGATTACCG 58.166 50.000 0.00 0.00 39.42 4.02
3773 4452 3.130516 GCTTAGGCCTTGTTTGGATTACC 59.869 47.826 12.58 0.00 0.00 2.85
3774 4453 4.371855 GCTTAGGCCTTGTTTGGATTAC 57.628 45.455 12.58 0.00 0.00 1.89
3788 4467 2.233922 TCTGTAGTTGAGTGGCTTAGGC 59.766 50.000 0.00 0.00 37.82 3.93
3789 4468 3.368531 GGTCTGTAGTTGAGTGGCTTAGG 60.369 52.174 0.00 0.00 0.00 2.69
3790 4469 3.258372 TGGTCTGTAGTTGAGTGGCTTAG 59.742 47.826 0.00 0.00 0.00 2.18
3791 4470 3.006537 GTGGTCTGTAGTTGAGTGGCTTA 59.993 47.826 0.00 0.00 0.00 3.09
3792 4471 2.047061 TGGTCTGTAGTTGAGTGGCTT 58.953 47.619 0.00 0.00 0.00 4.35
3811 4490 3.139077 GGAAACTGGTAGTGGAACAGTG 58.861 50.000 0.00 0.00 44.58 3.66
3855 4534 7.881142 TCAGAATAACAACCAAACCAATACAG 58.119 34.615 0.00 0.00 0.00 2.74
3857 4536 7.328493 GCTTCAGAATAACAACCAAACCAATAC 59.672 37.037 0.00 0.00 0.00 1.89
3868 4547 7.148086 TGGAATACCATGCTTCAGAATAACAAC 60.148 37.037 0.00 0.00 41.77 3.32
3873 4552 9.066892 GTATTTGGAATACCATGCTTCAGAATA 57.933 33.333 0.00 0.00 46.34 1.75
3874 4553 7.781693 AGTATTTGGAATACCATGCTTCAGAAT 59.218 33.333 7.09 0.00 46.34 2.40
3875 4554 7.067372 CAGTATTTGGAATACCATGCTTCAGAA 59.933 37.037 7.09 0.00 46.34 3.02
3876 4555 6.543465 CAGTATTTGGAATACCATGCTTCAGA 59.457 38.462 7.09 0.00 46.34 3.27
3877 4556 6.319658 ACAGTATTTGGAATACCATGCTTCAG 59.680 38.462 7.09 0.00 46.34 3.02
3878 4557 6.186957 ACAGTATTTGGAATACCATGCTTCA 58.813 36.000 7.09 0.00 46.34 3.02
3879 4558 6.699575 ACAGTATTTGGAATACCATGCTTC 57.300 37.500 7.09 0.00 46.34 3.86
3900 4579 6.037062 CGACAAGCATATTTCATTCTGGTACA 59.963 38.462 0.00 0.00 0.00 2.90
3901 4580 6.037172 ACGACAAGCATATTTCATTCTGGTAC 59.963 38.462 0.00 0.00 0.00 3.34
3902 4581 6.112734 ACGACAAGCATATTTCATTCTGGTA 58.887 36.000 0.00 0.00 0.00 3.25
3903 4582 4.943705 ACGACAAGCATATTTCATTCTGGT 59.056 37.500 0.00 0.00 0.00 4.00
3904 4583 5.490139 ACGACAAGCATATTTCATTCTGG 57.510 39.130 0.00 0.00 0.00 3.86
3905 4584 7.688372 AGTAACGACAAGCATATTTCATTCTG 58.312 34.615 0.00 0.00 0.00 3.02
3906 4585 7.849804 AGTAACGACAAGCATATTTCATTCT 57.150 32.000 0.00 0.00 0.00 2.40
3907 4586 8.818057 AGTAGTAACGACAAGCATATTTCATTC 58.182 33.333 0.00 0.00 0.00 2.67
3908 4587 8.604035 CAGTAGTAACGACAAGCATATTTCATT 58.396 33.333 0.00 0.00 0.00 2.57
3909 4588 7.764443 ACAGTAGTAACGACAAGCATATTTCAT 59.236 33.333 0.00 0.00 0.00 2.57
3911 4590 7.063074 ACACAGTAGTAACGACAAGCATATTTC 59.937 37.037 0.00 0.00 0.00 2.17
3912 4591 6.872020 ACACAGTAGTAACGACAAGCATATTT 59.128 34.615 0.00 0.00 0.00 1.40
3913 4592 6.395629 ACACAGTAGTAACGACAAGCATATT 58.604 36.000 0.00 0.00 0.00 1.28
3914 4593 5.962433 ACACAGTAGTAACGACAAGCATAT 58.038 37.500 0.00 0.00 0.00 1.78
3915 4594 5.381174 ACACAGTAGTAACGACAAGCATA 57.619 39.130 0.00 0.00 0.00 3.14
3916 4595 4.252971 ACACAGTAGTAACGACAAGCAT 57.747 40.909 0.00 0.00 0.00 3.79
3917 4596 3.720949 ACACAGTAGTAACGACAAGCA 57.279 42.857 0.00 0.00 0.00 3.91
3919 4598 5.517411 TCACAAACACAGTAGTAACGACAAG 59.483 40.000 0.00 0.00 0.00 3.16
3920 4599 5.409211 TCACAAACACAGTAGTAACGACAA 58.591 37.500 0.00 0.00 0.00 3.18
3921 4600 4.996344 TCACAAACACAGTAGTAACGACA 58.004 39.130 0.00 0.00 0.00 4.35
3922 4601 6.019318 ACAATCACAAACACAGTAGTAACGAC 60.019 38.462 0.00 0.00 0.00 4.34
3923 4602 6.019398 CACAATCACAAACACAGTAGTAACGA 60.019 38.462 0.00 0.00 0.00 3.85
3924 4603 6.019398 TCACAATCACAAACACAGTAGTAACG 60.019 38.462 0.00 0.00 0.00 3.18
3925 4604 7.241663 TCACAATCACAAACACAGTAGTAAC 57.758 36.000 0.00 0.00 0.00 2.50
3926 4605 7.466725 GCTTCACAATCACAAACACAGTAGTAA 60.467 37.037 0.00 0.00 0.00 2.24
3936 4615 3.981211 ACCATGCTTCACAATCACAAAC 58.019 40.909 0.00 0.00 0.00 2.93
3949 4628 7.148018 CCAGAATAAACAGACAATACCATGCTT 60.148 37.037 0.00 0.00 0.00 3.91
3951 4630 6.095440 ACCAGAATAAACAGACAATACCATGC 59.905 38.462 0.00 0.00 0.00 4.06
3965 4644 5.195001 TCACAGGCAAAACCAGAATAAAC 57.805 39.130 0.00 0.00 43.14 2.01
3981 4660 9.398170 CAAATGTCTTGTTATTTAACTCACAGG 57.602 33.333 2.45 0.00 37.12 4.00
4008 4687 1.616620 CGAACCCAAACGCAATCATG 58.383 50.000 0.00 0.00 0.00 3.07
4009 4688 0.525761 CCGAACCCAAACGCAATCAT 59.474 50.000 0.00 0.00 0.00 2.45
4010 4689 0.535328 TCCGAACCCAAACGCAATCA 60.535 50.000 0.00 0.00 0.00 2.57
4011 4690 0.109919 GTCCGAACCCAAACGCAATC 60.110 55.000 0.00 0.00 0.00 2.67
4012 4691 1.520600 GGTCCGAACCCAAACGCAAT 61.521 55.000 0.00 0.00 39.93 3.56
4013 4692 2.188161 GGTCCGAACCCAAACGCAA 61.188 57.895 0.00 0.00 39.93 4.85
4014 4693 2.592287 GGTCCGAACCCAAACGCA 60.592 61.111 0.00 0.00 39.93 5.24
4022 4701 3.181500 GCAATATCACAAAGGTCCGAACC 60.181 47.826 0.00 0.00 46.87 3.62
4023 4702 3.485216 CGCAATATCACAAAGGTCCGAAC 60.485 47.826 0.00 0.00 0.00 3.95
4024 4703 2.675844 CGCAATATCACAAAGGTCCGAA 59.324 45.455 0.00 0.00 0.00 4.30
4025 4704 2.276201 CGCAATATCACAAAGGTCCGA 58.724 47.619 0.00 0.00 0.00 4.55
4026 4705 2.006888 ACGCAATATCACAAAGGTCCG 58.993 47.619 0.00 0.00 0.00 4.79
4027 4706 4.814234 TGATACGCAATATCACAAAGGTCC 59.186 41.667 4.00 0.00 43.99 4.46
4028 4707 5.050091 CCTGATACGCAATATCACAAAGGTC 60.050 44.000 4.00 0.00 43.99 3.85
4029 4708 4.816385 CCTGATACGCAATATCACAAAGGT 59.184 41.667 4.00 0.00 43.99 3.50
4030 4709 4.816385 ACCTGATACGCAATATCACAAAGG 59.184 41.667 4.00 6.53 43.99 3.11
4031 4710 5.523552 TCACCTGATACGCAATATCACAAAG 59.476 40.000 4.00 0.00 43.99 2.77
4032 4711 5.423886 TCACCTGATACGCAATATCACAAA 58.576 37.500 4.00 0.00 43.99 2.83
4033 4712 5.017294 TCACCTGATACGCAATATCACAA 57.983 39.130 4.00 0.00 43.99 3.33
4034 4713 4.664150 TCACCTGATACGCAATATCACA 57.336 40.909 4.00 0.00 43.99 3.58
4035 4714 6.633668 GTATCACCTGATACGCAATATCAC 57.366 41.667 9.21 0.00 43.99 3.06
4046 4725 0.190069 AGCCCCGGTATCACCTGATA 59.810 55.000 0.00 0.00 35.66 2.15
4047 4726 0.694444 AAGCCCCGGTATCACCTGAT 60.694 55.000 0.00 0.00 35.66 2.90
4048 4727 0.031917 TAAGCCCCGGTATCACCTGA 60.032 55.000 0.00 0.00 35.66 3.86
4049 4728 0.834612 TTAAGCCCCGGTATCACCTG 59.165 55.000 0.00 0.00 35.66 4.00
4050 4729 1.587066 TTTAAGCCCCGGTATCACCT 58.413 50.000 0.00 0.00 35.66 4.00
4051 4730 2.227194 CATTTAAGCCCCGGTATCACC 58.773 52.381 0.00 0.00 34.05 4.02
4052 4731 1.607148 GCATTTAAGCCCCGGTATCAC 59.393 52.381 0.00 0.00 0.00 3.06
4053 4732 1.493022 AGCATTTAAGCCCCGGTATCA 59.507 47.619 0.00 0.00 34.23 2.15
4054 4733 2.152016 GAGCATTTAAGCCCCGGTATC 58.848 52.381 0.00 0.00 34.23 2.24
4055 4734 1.202891 GGAGCATTTAAGCCCCGGTAT 60.203 52.381 0.00 0.00 34.23 2.73
4056 4735 0.181824 GGAGCATTTAAGCCCCGGTA 59.818 55.000 0.00 0.00 34.23 4.02
4057 4736 1.076995 GGAGCATTTAAGCCCCGGT 60.077 57.895 0.00 0.00 34.23 5.28
4058 4737 1.828224 GGGAGCATTTAAGCCCCGG 60.828 63.158 0.00 0.00 36.00 5.73
4059 4738 0.468029 ATGGGAGCATTTAAGCCCCG 60.468 55.000 0.00 0.00 43.69 5.73
4060 4739 1.043022 CATGGGAGCATTTAAGCCCC 58.957 55.000 0.00 0.00 42.15 5.80
4061 4740 2.071778 TCATGGGAGCATTTAAGCCC 57.928 50.000 0.00 0.00 41.08 5.19
4062 4741 2.288640 GCATCATGGGAGCATTTAAGCC 60.289 50.000 0.00 0.00 34.23 4.35
4063 4742 2.626743 AGCATCATGGGAGCATTTAAGC 59.373 45.455 7.49 0.00 0.00 3.09
4064 4743 4.931661 AAGCATCATGGGAGCATTTAAG 57.068 40.909 7.49 0.00 0.00 1.85
4065 4744 4.710865 TGAAAGCATCATGGGAGCATTTAA 59.289 37.500 7.49 0.00 31.50 1.52
4066 4745 4.279982 TGAAAGCATCATGGGAGCATTTA 58.720 39.130 7.49 0.00 31.50 1.40
4067 4746 3.101437 TGAAAGCATCATGGGAGCATTT 58.899 40.909 7.49 5.43 31.50 2.32
4068 4747 2.742348 TGAAAGCATCATGGGAGCATT 58.258 42.857 7.49 2.37 31.50 3.56
4069 4748 2.429610 GTTGAAAGCATCATGGGAGCAT 59.570 45.455 7.49 0.00 38.03 3.79
4070 4749 1.820519 GTTGAAAGCATCATGGGAGCA 59.179 47.619 7.49 0.00 38.03 4.26
4071 4750 1.820519 TGTTGAAAGCATCATGGGAGC 59.179 47.619 0.00 0.00 38.03 4.70
4072 4751 4.401519 AGAATGTTGAAAGCATCATGGGAG 59.598 41.667 0.00 0.00 38.03 4.30
4073 4752 4.158949 CAGAATGTTGAAAGCATCATGGGA 59.841 41.667 0.00 0.00 38.03 4.37
4074 4753 4.430007 CAGAATGTTGAAAGCATCATGGG 58.570 43.478 0.00 0.00 38.03 4.00
4075 4754 3.863424 GCAGAATGTTGAAAGCATCATGG 59.137 43.478 0.00 0.00 39.31 3.66
4076 4755 4.490743 TGCAGAATGTTGAAAGCATCATG 58.509 39.130 0.00 0.00 39.31 3.07
4077 4756 4.794278 TGCAGAATGTTGAAAGCATCAT 57.206 36.364 0.00 0.00 39.31 2.45
4078 4757 4.587584 TTGCAGAATGTTGAAAGCATCA 57.412 36.364 0.00 0.00 39.31 3.07
4079 4758 5.910637 TTTTGCAGAATGTTGAAAGCATC 57.089 34.783 0.00 0.00 39.31 3.91
4099 4778 8.846943 ATTTGTTGACTTCAAAAGGTCTTTTT 57.153 26.923 6.01 0.00 40.45 1.94
4100 4779 8.720562 CAATTTGTTGACTTCAAAAGGTCTTTT 58.279 29.630 3.12 3.12 42.91 2.27
4101 4780 7.148423 GCAATTTGTTGACTTCAAAAGGTCTTT 60.148 33.333 0.00 0.00 38.11 2.52
4102 4781 6.313658 GCAATTTGTTGACTTCAAAAGGTCTT 59.686 34.615 0.00 0.00 38.11 3.01
4103 4782 5.812127 GCAATTTGTTGACTTCAAAAGGTCT 59.188 36.000 0.00 0.00 38.11 3.85
4104 4783 5.580297 TGCAATTTGTTGACTTCAAAAGGTC 59.420 36.000 0.00 0.00 38.11 3.85
4105 4784 5.486526 TGCAATTTGTTGACTTCAAAAGGT 58.513 33.333 0.00 0.00 38.11 3.50
4106 4785 6.419980 TTGCAATTTGTTGACTTCAAAAGG 57.580 33.333 0.00 0.00 38.11 3.11
4107 4786 7.296660 TGTTTGCAATTTGTTGACTTCAAAAG 58.703 30.769 0.00 0.00 38.11 2.27
4108 4787 7.194607 TGTTTGCAATTTGTTGACTTCAAAA 57.805 28.000 0.00 0.00 38.11 2.44
4109 4788 6.791887 TGTTTGCAATTTGTTGACTTCAAA 57.208 29.167 0.00 0.00 37.63 2.69
4110 4789 6.426328 ACTTGTTTGCAATTTGTTGACTTCAA 59.574 30.769 0.00 0.00 33.65 2.69
4111 4790 5.931146 ACTTGTTTGCAATTTGTTGACTTCA 59.069 32.000 0.00 0.00 33.65 3.02
4112 4791 6.407475 ACTTGTTTGCAATTTGTTGACTTC 57.593 33.333 0.00 0.00 33.65 3.01
4113 4792 6.034470 CGTACTTGTTTGCAATTTGTTGACTT 59.966 34.615 0.00 0.00 33.65 3.01
4114 4793 5.514914 CGTACTTGTTTGCAATTTGTTGACT 59.485 36.000 0.00 0.00 33.65 3.41
4115 4794 5.276161 CCGTACTTGTTTGCAATTTGTTGAC 60.276 40.000 0.00 0.00 33.65 3.18
4116 4795 4.800993 CCGTACTTGTTTGCAATTTGTTGA 59.199 37.500 0.00 0.00 33.65 3.18
4117 4796 4.549871 GCCGTACTTGTTTGCAATTTGTTG 60.550 41.667 0.00 0.00 33.65 3.33
4118 4797 3.553917 GCCGTACTTGTTTGCAATTTGTT 59.446 39.130 0.00 0.00 33.65 2.83
4119 4798 3.120041 GCCGTACTTGTTTGCAATTTGT 58.880 40.909 0.00 0.02 33.65 2.83
4120 4799 3.119291 TGCCGTACTTGTTTGCAATTTG 58.881 40.909 0.00 0.00 33.65 2.32
4121 4800 3.380142 CTGCCGTACTTGTTTGCAATTT 58.620 40.909 0.00 0.00 33.65 1.82
4122 4801 2.862140 GCTGCCGTACTTGTTTGCAATT 60.862 45.455 0.00 0.00 33.65 2.32
4123 4802 1.335872 GCTGCCGTACTTGTTTGCAAT 60.336 47.619 0.00 0.00 33.65 3.56
4124 4803 0.030101 GCTGCCGTACTTGTTTGCAA 59.970 50.000 0.00 0.00 0.00 4.08
4125 4804 1.652012 GCTGCCGTACTTGTTTGCA 59.348 52.632 0.00 0.00 0.00 4.08
4126 4805 1.081442 GGCTGCCGTACTTGTTTGC 60.081 57.895 1.35 0.00 0.00 3.68
4127 4806 0.951558 AAGGCTGCCGTACTTGTTTG 59.048 50.000 13.96 0.00 0.00 2.93
4128 4807 1.607148 GAAAGGCTGCCGTACTTGTTT 59.393 47.619 13.96 6.27 0.00 2.83
4129 4808 1.235724 GAAAGGCTGCCGTACTTGTT 58.764 50.000 13.96 0.00 0.00 2.83
4130 4809 0.107831 TGAAAGGCTGCCGTACTTGT 59.892 50.000 13.96 0.00 0.00 3.16
4131 4810 0.798776 CTGAAAGGCTGCCGTACTTG 59.201 55.000 13.96 0.00 0.00 3.16
4132 4811 0.685097 TCTGAAAGGCTGCCGTACTT 59.315 50.000 13.96 5.56 0.00 2.24
4133 4812 0.905357 ATCTGAAAGGCTGCCGTACT 59.095 50.000 13.96 0.00 0.00 2.73
4134 4813 1.666189 GAATCTGAAAGGCTGCCGTAC 59.334 52.381 13.96 8.90 0.00 3.67
4135 4814 1.406887 GGAATCTGAAAGGCTGCCGTA 60.407 52.381 13.96 0.00 0.00 4.02
4136 4815 0.678048 GGAATCTGAAAGGCTGCCGT 60.678 55.000 13.96 7.28 0.00 5.68
4137 4816 0.393537 AGGAATCTGAAAGGCTGCCG 60.394 55.000 13.96 0.00 0.00 5.69
4138 4817 1.101331 CAGGAATCTGAAAGGCTGCC 58.899 55.000 11.65 11.65 43.49 4.85
4139 4818 1.101331 CCAGGAATCTGAAAGGCTGC 58.899 55.000 0.00 0.00 43.49 5.25
4140 4819 2.089980 CACCAGGAATCTGAAAGGCTG 58.910 52.381 0.00 0.00 43.49 4.85
4141 4820 1.615384 GCACCAGGAATCTGAAAGGCT 60.615 52.381 0.00 0.00 43.49 4.58
4142 4821 0.813821 GCACCAGGAATCTGAAAGGC 59.186 55.000 0.00 0.00 43.49 4.35
4143 4822 1.272092 TGGCACCAGGAATCTGAAAGG 60.272 52.381 0.00 0.00 43.49 3.11
4144 4823 1.815003 GTGGCACCAGGAATCTGAAAG 59.185 52.381 6.29 0.00 43.49 2.62
4145 4824 1.425066 AGTGGCACCAGGAATCTGAAA 59.575 47.619 15.27 0.00 43.49 2.69
4146 4825 1.067295 AGTGGCACCAGGAATCTGAA 58.933 50.000 15.27 0.00 43.49 3.02
4147 4826 0.325933 CAGTGGCACCAGGAATCTGA 59.674 55.000 15.27 0.00 43.49 3.27
4148 4827 0.679002 CCAGTGGCACCAGGAATCTG 60.679 60.000 18.94 6.58 40.59 2.90
4149 4828 1.687612 CCAGTGGCACCAGGAATCT 59.312 57.895 18.94 0.00 0.00 2.40
4150 4829 4.326255 CCAGTGGCACCAGGAATC 57.674 61.111 18.94 0.00 0.00 2.52
4175 4854 2.768344 ATACCCTGCCCACCGGAG 60.768 66.667 9.46 0.00 0.00 4.63
4176 4855 3.087253 CATACCCTGCCCACCGGA 61.087 66.667 9.46 0.00 0.00 5.14
4177 4856 4.189580 CCATACCCTGCCCACCGG 62.190 72.222 0.00 0.00 0.00 5.28
4178 4857 4.875713 GCCATACCCTGCCCACCG 62.876 72.222 0.00 0.00 0.00 4.94
4179 4858 3.738481 TGCCATACCCTGCCCACC 61.738 66.667 0.00 0.00 0.00 4.61
4180 4859 2.440247 GTGCCATACCCTGCCCAC 60.440 66.667 0.00 0.00 0.00 4.61
4181 4860 3.738481 GGTGCCATACCCTGCCCA 61.738 66.667 0.00 0.00 44.15 5.36
4194 4873 0.751643 AATCAAGGTATGGCGGGTGC 60.752 55.000 0.00 0.00 41.71 5.01
4195 4874 1.762708 AAATCAAGGTATGGCGGGTG 58.237 50.000 0.00 0.00 0.00 4.61
4196 4875 2.495669 CAAAAATCAAGGTATGGCGGGT 59.504 45.455 0.00 0.00 0.00 5.28
4197 4876 2.159114 CCAAAAATCAAGGTATGGCGGG 60.159 50.000 0.00 0.00 0.00 6.13
4198 4877 2.738321 GCCAAAAATCAAGGTATGGCGG 60.738 50.000 0.00 0.00 43.26 6.13
4199 4878 2.539476 GCCAAAAATCAAGGTATGGCG 58.461 47.619 0.00 0.00 43.26 5.69
4201 4880 6.874288 TTTTTGCCAAAAATCAAGGTATGG 57.126 33.333 11.16 0.00 35.57 2.74
4232 4911 8.251721 GGTCAAAAGCGATAGATACATAGGTAT 58.748 37.037 0.00 0.00 42.86 2.73
4233 4912 7.450634 AGGTCAAAAGCGATAGATACATAGGTA 59.549 37.037 0.00 0.00 39.76 3.08
4234 4913 6.267928 AGGTCAAAAGCGATAGATACATAGGT 59.732 38.462 0.00 0.00 39.76 3.08
4235 4914 6.587990 CAGGTCAAAAGCGATAGATACATAGG 59.412 42.308 0.00 0.00 39.76 2.57
4236 4915 6.587990 CCAGGTCAAAAGCGATAGATACATAG 59.412 42.308 0.00 0.00 39.76 2.23
4237 4916 6.266786 TCCAGGTCAAAAGCGATAGATACATA 59.733 38.462 0.00 0.00 39.76 2.29
4238 4917 5.070446 TCCAGGTCAAAAGCGATAGATACAT 59.930 40.000 0.00 0.00 39.76 2.29
4239 4918 4.404394 TCCAGGTCAAAAGCGATAGATACA 59.596 41.667 0.00 0.00 39.76 2.29
4240 4919 4.745620 GTCCAGGTCAAAAGCGATAGATAC 59.254 45.833 0.00 0.00 39.76 2.24
4241 4920 4.404394 TGTCCAGGTCAAAAGCGATAGATA 59.596 41.667 0.00 0.00 39.76 1.98
4242 4921 3.197766 TGTCCAGGTCAAAAGCGATAGAT 59.802 43.478 0.00 0.00 39.76 1.98
4243 4922 2.565391 TGTCCAGGTCAAAAGCGATAGA 59.435 45.455 0.00 0.00 39.76 1.98
4244 4923 2.972625 TGTCCAGGTCAAAAGCGATAG 58.027 47.619 0.00 0.00 0.00 2.08
4245 4924 3.531538 GATGTCCAGGTCAAAAGCGATA 58.468 45.455 0.00 0.00 0.00 2.92
4246 4925 2.359900 GATGTCCAGGTCAAAAGCGAT 58.640 47.619 0.00 0.00 0.00 4.58
4247 4926 1.808411 GATGTCCAGGTCAAAAGCGA 58.192 50.000 0.00 0.00 0.00 4.93
4248 4927 0.443869 CGATGTCCAGGTCAAAAGCG 59.556 55.000 0.00 0.00 0.00 4.68
4249 4928 0.804989 CCGATGTCCAGGTCAAAAGC 59.195 55.000 0.00 0.00 0.00 3.51
4250 4929 0.804989 GCCGATGTCCAGGTCAAAAG 59.195 55.000 0.00 0.00 0.00 2.27
4251 4930 0.953471 CGCCGATGTCCAGGTCAAAA 60.953 55.000 0.00 0.00 0.00 2.44
4252 4931 1.375396 CGCCGATGTCCAGGTCAAA 60.375 57.895 0.00 0.00 0.00 2.69
4253 4932 2.264480 CGCCGATGTCCAGGTCAA 59.736 61.111 0.00 0.00 0.00 3.18
4254 4933 4.451150 GCGCCGATGTCCAGGTCA 62.451 66.667 0.00 0.00 0.00 4.02
4255 4934 4.148825 AGCGCCGATGTCCAGGTC 62.149 66.667 2.29 0.00 0.00 3.85
4256 4935 4.148825 GAGCGCCGATGTCCAGGT 62.149 66.667 2.29 0.00 0.00 4.00
4258 4937 4.193334 TCGAGCGCCGATGTCCAG 62.193 66.667 15.44 0.00 43.23 3.86
4282 4961 2.479750 GGGGTACGTCGAGGCTCTC 61.480 68.421 13.50 4.79 0.00 3.20
4283 4962 2.439883 GGGGTACGTCGAGGCTCT 60.440 66.667 13.50 0.00 0.00 4.09
4284 4963 2.753043 TGGGGTACGTCGAGGCTC 60.753 66.667 3.87 3.87 0.00 4.70
4285 4964 3.066814 GTGGGGTACGTCGAGGCT 61.067 66.667 4.75 0.00 0.00 4.58
4286 4965 3.066814 AGTGGGGTACGTCGAGGC 61.067 66.667 4.75 0.00 0.00 4.70
4287 4966 2.707849 CCAGTGGGGTACGTCGAGG 61.708 68.421 0.00 3.03 0.00 4.63
4288 4967 2.882876 CCAGTGGGGTACGTCGAG 59.117 66.667 0.00 0.00 0.00 4.04
4289 4968 3.376078 GCCAGTGGGGTACGTCGA 61.376 66.667 12.15 0.00 39.65 4.20
4290 4969 4.446413 GGCCAGTGGGGTACGTCG 62.446 72.222 12.15 0.00 39.65 5.12
4291 4970 4.091939 GGGCCAGTGGGGTACGTC 62.092 72.222 12.15 0.00 39.65 4.34
4292 4971 4.966274 TGGGCCAGTGGGGTACGT 62.966 66.667 12.15 0.00 39.65 3.57
4293 4972 4.404098 GTGGGCCAGTGGGGTACG 62.404 72.222 6.40 0.00 39.65 3.67
4294 4973 2.933834 AGTGGGCCAGTGGGGTAC 60.934 66.667 14.44 0.00 39.65 3.34
4295 4974 2.609610 GAGTGGGCCAGTGGGGTA 60.610 66.667 20.91 0.00 39.65 3.69
4296 4975 4.918360 TGAGTGGGCCAGTGGGGT 62.918 66.667 20.91 0.00 39.65 4.95
4297 4976 4.039092 CTGAGTGGGCCAGTGGGG 62.039 72.222 20.91 4.50 40.85 4.96
4298 4977 2.930019 TCTGAGTGGGCCAGTGGG 60.930 66.667 20.91 11.06 33.57 4.61
4299 4978 2.348998 GTCTGAGTGGGCCAGTGG 59.651 66.667 20.91 11.43 33.57 4.00
4300 4979 2.348998 GGTCTGAGTGGGCCAGTG 59.651 66.667 20.91 5.36 33.57 3.66
4301 4980 2.930562 GGGTCTGAGTGGGCCAGT 60.931 66.667 15.23 15.23 33.57 4.00
4302 4981 2.930019 TGGGTCTGAGTGGGCCAG 60.930 66.667 6.40 0.00 0.00 4.85
4303 4982 3.249189 GTGGGTCTGAGTGGGCCA 61.249 66.667 0.00 0.00 0.00 5.36
4304 4983 4.035102 GGTGGGTCTGAGTGGGCC 62.035 72.222 0.00 0.00 0.00 5.80
4305 4984 2.829384 TTGGTGGGTCTGAGTGGGC 61.829 63.158 0.00 0.00 0.00 5.36
4306 4985 1.073199 GTTGGTGGGTCTGAGTGGG 59.927 63.158 0.00 0.00 0.00 4.61
4307 4986 1.301716 CGTTGGTGGGTCTGAGTGG 60.302 63.158 0.00 0.00 0.00 4.00
4308 4987 1.961277 GCGTTGGTGGGTCTGAGTG 60.961 63.158 0.00 0.00 0.00 3.51
4309 4988 2.426023 GCGTTGGTGGGTCTGAGT 59.574 61.111 0.00 0.00 0.00 3.41
4310 4989 2.738521 CGCGTTGGTGGGTCTGAG 60.739 66.667 0.00 0.00 0.00 3.35
4311 4990 4.980805 GCGCGTTGGTGGGTCTGA 62.981 66.667 8.43 0.00 0.00 3.27
4332 5011 3.444818 TTTGGGTCTGGGTGGGTGC 62.445 63.158 0.00 0.00 0.00 5.01
4333 5012 1.530655 GTTTGGGTCTGGGTGGGTG 60.531 63.158 0.00 0.00 0.00 4.61
4334 5013 2.931921 GTTTGGGTCTGGGTGGGT 59.068 61.111 0.00 0.00 0.00 4.51
4335 5014 2.282180 CGTTTGGGTCTGGGTGGG 60.282 66.667 0.00 0.00 0.00 4.61
4336 5015 2.983592 GCGTTTGGGTCTGGGTGG 60.984 66.667 0.00 0.00 0.00 4.61
4337 5016 3.353836 CGCGTTTGGGTCTGGGTG 61.354 66.667 0.00 0.00 0.00 4.61
4338 5017 3.552384 TCGCGTTTGGGTCTGGGT 61.552 61.111 5.77 0.00 0.00 4.51
4339 5018 3.047877 GTCGCGTTTGGGTCTGGG 61.048 66.667 5.77 0.00 0.00 4.45
4340 5019 2.280524 TGTCGCGTTTGGGTCTGG 60.281 61.111 5.77 0.00 0.00 3.86
4341 5020 1.594293 ACTGTCGCGTTTGGGTCTG 60.594 57.895 5.77 0.00 0.00 3.51
4342 5021 1.594293 CACTGTCGCGTTTGGGTCT 60.594 57.895 5.77 0.00 0.00 3.85
4343 5022 2.935955 CACTGTCGCGTTTGGGTC 59.064 61.111 5.77 0.00 0.00 4.46
4344 5023 3.276846 GCACTGTCGCGTTTGGGT 61.277 61.111 5.77 0.00 0.00 4.51
4352 5031 4.961511 TGGGTGTCGCACTGTCGC 62.962 66.667 9.31 0.00 34.40 5.19
4353 5032 3.036084 GTGGGTGTCGCACTGTCG 61.036 66.667 9.16 0.00 42.71 4.35
4354 5033 2.665185 GGTGGGTGTCGCACTGTC 60.665 66.667 14.52 0.00 44.85 3.51
4355 5034 4.250305 GGGTGGGTGTCGCACTGT 62.250 66.667 14.52 0.00 44.85 3.55
4356 5035 3.765894 TTGGGTGGGTGTCGCACTG 62.766 63.158 14.52 0.00 44.85 3.66
4357 5036 3.050354 TTTGGGTGGGTGTCGCACT 62.050 57.895 14.52 0.00 44.85 4.40
4358 5037 2.517402 TTTGGGTGGGTGTCGCAC 60.517 61.111 8.13 8.13 44.77 5.34
4359 5038 2.517402 GTTTGGGTGGGTGTCGCA 60.517 61.111 0.00 0.00 0.00 5.10
4360 5039 2.400269 TAGGTTTGGGTGGGTGTCGC 62.400 60.000 0.00 0.00 0.00 5.19
4361 5040 0.321298 CTAGGTTTGGGTGGGTGTCG 60.321 60.000 0.00 0.00 0.00 4.35
4362 5041 0.608308 GCTAGGTTTGGGTGGGTGTC 60.608 60.000 0.00 0.00 0.00 3.67
4363 5042 1.458927 GCTAGGTTTGGGTGGGTGT 59.541 57.895 0.00 0.00 0.00 4.16
4364 5043 1.674322 CGCTAGGTTTGGGTGGGTG 60.674 63.158 0.00 0.00 0.00 4.61
4365 5044 2.754375 CGCTAGGTTTGGGTGGGT 59.246 61.111 0.00 0.00 0.00 4.51
4366 5045 2.750237 GCGCTAGGTTTGGGTGGG 60.750 66.667 0.00 0.00 0.00 4.61
4367 5046 3.124921 CGCGCTAGGTTTGGGTGG 61.125 66.667 5.56 0.00 0.00 4.61
4368 5047 3.124921 CCGCGCTAGGTTTGGGTG 61.125 66.667 5.56 0.00 0.00 4.61
4456 5135 3.984732 AACAGCCCTCCAAGCCCC 61.985 66.667 0.00 0.00 0.00 5.80
4457 5136 2.677875 CAACAGCCCTCCAAGCCC 60.678 66.667 0.00 0.00 0.00 5.19
4458 5137 3.376918 GCAACAGCCCTCCAAGCC 61.377 66.667 0.00 0.00 0.00 4.35
4459 5138 2.598394 TGCAACAGCCCTCCAAGC 60.598 61.111 0.00 0.00 0.00 4.01
4460 5139 1.529010 TGTGCAACAGCCCTCCAAG 60.529 57.895 0.00 0.00 45.67 3.61
4461 5140 2.600164 TGTGCAACAGCCCTCCAA 59.400 55.556 0.00 0.00 45.67 3.53
4472 5151 3.286751 GAAGGTGCCGCTGTGCAA 61.287 61.111 0.00 0.00 44.11 4.08
4473 5152 4.560743 TGAAGGTGCCGCTGTGCA 62.561 61.111 0.00 0.00 39.37 4.57
4474 5153 3.730761 CTGAAGGTGCCGCTGTGC 61.731 66.667 0.00 0.00 0.00 4.57
4475 5154 3.730761 GCTGAAGGTGCCGCTGTG 61.731 66.667 0.00 0.00 0.00 3.66
4538 5217 3.570638 CTTGATGCGCCGCTGGAG 61.571 66.667 11.67 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.