Multiple sequence alignment - TraesCS4A01G172900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G172900 chr4A 100.000 2736 0 0 1 2736 439069956 439067221 0.000000e+00 5053.0
1 TraesCS4A01G172900 chr4A 78.652 178 34 4 2500 2675 214998731 214998556 6.190000e-22 115.0
2 TraesCS4A01G172900 chr4A 83.761 117 15 4 2587 2701 655915561 655915447 1.040000e-19 108.0
3 TraesCS4A01G172900 chr7D 94.456 992 54 1 1 991 461756634 461757625 0.000000e+00 1526.0
4 TraesCS4A01G172900 chr7D 93.857 993 58 3 1 991 438085580 438086571 0.000000e+00 1493.0
5 TraesCS4A01G172900 chr7D 93.750 992 60 2 1 992 181066956 181065967 0.000000e+00 1487.0
6 TraesCS4A01G172900 chr7D 92.492 666 47 2 1057 1719 91392922 91392257 0.000000e+00 950.0
7 TraesCS4A01G172900 chr7D 91.916 668 47 6 1057 1719 185138800 185138135 0.000000e+00 928.0
8 TraesCS4A01G172900 chr7D 94.505 182 10 0 1716 1897 91392168 91391987 5.770000e-72 281.0
9 TraesCS4A01G172900 chr7D 92.308 182 14 0 1716 1897 185137871 185137690 2.700000e-65 259.0
10 TraesCS4A01G172900 chr7D 89.017 173 16 2 1893 2063 91391909 91391738 7.680000e-51 211.0
11 TraesCS4A01G172900 chr7D 89.017 173 16 2 1893 2063 185137616 185137445 7.680000e-51 211.0
12 TraesCS4A01G172900 chr3D 94.135 989 56 2 1 989 212840019 212841005 0.000000e+00 1504.0
13 TraesCS4A01G172900 chr3D 93.946 991 60 0 1 991 92520207 92519217 0.000000e+00 1498.0
14 TraesCS4A01G172900 chr3D 93.845 991 60 1 1 991 350925795 350924806 0.000000e+00 1491.0
15 TraesCS4A01G172900 chr3D 82.759 116 18 2 2587 2701 225836217 225836331 4.820000e-18 102.0
16 TraesCS4A01G172900 chr3D 82.051 117 17 4 2587 2701 380027144 380027258 2.240000e-16 97.1
17 TraesCS4A01G172900 chr2D 93.882 997 57 2 1 994 170341441 170340446 0.000000e+00 1500.0
18 TraesCS4A01G172900 chr6D 93.845 991 59 2 1 991 69851887 69850899 0.000000e+00 1491.0
19 TraesCS4A01G172900 chr6D 80.315 127 23 2 2577 2701 219661902 219662028 8.070000e-16 95.3
20 TraesCS4A01G172900 chr3A 93.832 989 60 1 1 989 151816366 151815379 0.000000e+00 1487.0
21 TraesCS4A01G172900 chr7B 93.844 666 38 2 1057 1719 43881225 43880560 0.000000e+00 1000.0
22 TraesCS4A01G172900 chr7B 91.766 668 48 6 1057 1719 327275341 327274676 0.000000e+00 922.0
23 TraesCS4A01G172900 chr7B 93.407 182 12 0 1716 1897 43880466 43880285 1.250000e-68 270.0
24 TraesCS4A01G172900 chr7B 91.209 182 16 0 1716 1897 327274415 327274234 5.850000e-62 248.0
25 TraesCS4A01G172900 chr7B 89.017 173 16 2 1893 2063 43880211 43880040 7.680000e-51 211.0
26 TraesCS4A01G172900 chr7B 88.439 173 17 2 1893 2063 327274159 327273988 3.570000e-49 206.0
27 TraesCS4A01G172900 chr7A 93.694 666 39 2 1057 1719 93074642 93075307 0.000000e+00 994.0
28 TraesCS4A01G172900 chr7A 92.216 668 45 6 1057 1719 192670234 192669569 0.000000e+00 939.0
29 TraesCS4A01G172900 chr7A 95.055 182 9 0 1716 1897 93075542 93075723 1.240000e-73 287.0
30 TraesCS4A01G172900 chr7A 92.308 182 14 0 1716 1897 192669289 192669108 2.700000e-65 259.0
31 TraesCS4A01G172900 chr7A 89.595 173 15 2 1893 2063 192669034 192668863 1.650000e-52 217.0
32 TraesCS4A01G172900 chr5B 82.906 117 16 4 2587 2701 584933459 584933345 4.820000e-18 102.0
33 TraesCS4A01G172900 chr5A 82.353 119 19 2 2584 2701 307135872 307135989 4.820000e-18 102.0
34 TraesCS4A01G172900 chr2B 82.906 117 16 4 2587 2701 672190581 672190695 4.820000e-18 102.0
35 TraesCS4A01G172900 chr2B 82.759 116 18 2 2587 2701 737968223 737968109 4.820000e-18 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G172900 chr4A 439067221 439069956 2735 True 5053.000000 5053 100.000000 1 2736 1 chr4A.!!$R2 2735
1 TraesCS4A01G172900 chr7D 461756634 461757625 991 False 1526.000000 1526 94.456000 1 991 1 chr7D.!!$F2 990
2 TraesCS4A01G172900 chr7D 438085580 438086571 991 False 1493.000000 1493 93.857000 1 991 1 chr7D.!!$F1 990
3 TraesCS4A01G172900 chr7D 181065967 181066956 989 True 1487.000000 1487 93.750000 1 992 1 chr7D.!!$R1 991
4 TraesCS4A01G172900 chr7D 91391738 91392922 1184 True 480.666667 950 92.004667 1057 2063 3 chr7D.!!$R2 1006
5 TraesCS4A01G172900 chr7D 185137445 185138800 1355 True 466.000000 928 91.080333 1057 2063 3 chr7D.!!$R3 1006
6 TraesCS4A01G172900 chr3D 212840019 212841005 986 False 1504.000000 1504 94.135000 1 989 1 chr3D.!!$F1 988
7 TraesCS4A01G172900 chr3D 92519217 92520207 990 True 1498.000000 1498 93.946000 1 991 1 chr3D.!!$R1 990
8 TraesCS4A01G172900 chr3D 350924806 350925795 989 True 1491.000000 1491 93.845000 1 991 1 chr3D.!!$R2 990
9 TraesCS4A01G172900 chr2D 170340446 170341441 995 True 1500.000000 1500 93.882000 1 994 1 chr2D.!!$R1 993
10 TraesCS4A01G172900 chr6D 69850899 69851887 988 True 1491.000000 1491 93.845000 1 991 1 chr6D.!!$R1 990
11 TraesCS4A01G172900 chr3A 151815379 151816366 987 True 1487.000000 1487 93.832000 1 989 1 chr3A.!!$R1 988
12 TraesCS4A01G172900 chr7B 43880040 43881225 1185 True 493.666667 1000 92.089333 1057 2063 3 chr7B.!!$R1 1006
13 TraesCS4A01G172900 chr7B 327273988 327275341 1353 True 458.666667 922 90.471333 1057 2063 3 chr7B.!!$R2 1006
14 TraesCS4A01G172900 chr7A 93074642 93075723 1081 False 640.500000 994 94.374500 1057 1897 2 chr7A.!!$F1 840
15 TraesCS4A01G172900 chr7A 192668863 192670234 1371 True 471.666667 939 91.373000 1057 2063 3 chr7A.!!$R1 1006

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
455 456 2.409651 GACCAGCGAGCCTACGAG 59.59 66.667 0.0 0.0 35.09 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2404 2829 0.033504 AGACAGTCGACCGCAATGTT 59.966 50.0 13.01 0.0 0.0 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
101 102 7.422032 AAGGGATATTAAGGCCTCCTTTTAT 57.578 36.000 5.23 0.00 41.69 1.40
152 153 7.223582 CACATAGTGAATACATGAACTCCTCAC 59.776 40.741 0.00 3.61 34.23 3.51
203 204 4.574674 TTATTGTCACTCCAGGATTGCT 57.425 40.909 1.70 0.00 0.00 3.91
219 220 6.923508 CAGGATTGCTAGATCATAACACGTAA 59.076 38.462 0.00 0.00 0.00 3.18
455 456 2.409651 GACCAGCGAGCCTACGAG 59.590 66.667 0.00 0.00 35.09 4.18
639 644 5.107298 CGCGATAATTCTTTCTCCCTGATTC 60.107 44.000 0.00 0.00 0.00 2.52
651 657 6.655078 TCTCCCTGATTCTTTTTGGAAAAG 57.345 37.500 6.79 6.79 0.00 2.27
952 960 6.681777 CAAATTAGAGTCCAAAACAAGAGGG 58.318 40.000 0.00 0.00 0.00 4.30
1001 1009 2.584970 CGTATCACGGTGGCGCAT 60.585 61.111 10.83 0.00 38.08 4.73
1002 1010 2.870341 CGTATCACGGTGGCGCATG 61.870 63.158 10.83 0.00 38.08 4.06
1003 1011 1.520564 GTATCACGGTGGCGCATGA 60.521 57.895 10.83 4.79 0.00 3.07
1004 1012 1.520564 TATCACGGTGGCGCATGAC 60.521 57.895 10.83 1.73 0.00 3.06
1036 1044 4.035102 GGGCCTTCTCCCAGCGTT 62.035 66.667 0.84 0.00 45.82 4.84
1037 1045 2.666098 GGGCCTTCTCCCAGCGTTA 61.666 63.158 0.84 0.00 45.82 3.18
1038 1046 1.527370 GGCCTTCTCCCAGCGTTAT 59.473 57.895 0.00 0.00 0.00 1.89
1039 1047 0.107165 GGCCTTCTCCCAGCGTTATT 60.107 55.000 0.00 0.00 0.00 1.40
1040 1048 1.300481 GCCTTCTCCCAGCGTTATTC 58.700 55.000 0.00 0.00 0.00 1.75
1041 1049 1.134371 GCCTTCTCCCAGCGTTATTCT 60.134 52.381 0.00 0.00 0.00 2.40
1042 1050 2.681097 GCCTTCTCCCAGCGTTATTCTT 60.681 50.000 0.00 0.00 0.00 2.52
1043 1051 3.198872 CCTTCTCCCAGCGTTATTCTTC 58.801 50.000 0.00 0.00 0.00 2.87
1044 1052 2.579207 TCTCCCAGCGTTATTCTTCG 57.421 50.000 0.00 0.00 0.00 3.79
1045 1053 1.136305 TCTCCCAGCGTTATTCTTCGG 59.864 52.381 0.00 0.00 0.00 4.30
1046 1054 0.177141 TCCCAGCGTTATTCTTCGGG 59.823 55.000 0.00 0.00 0.00 5.14
1047 1055 0.177141 CCCAGCGTTATTCTTCGGGA 59.823 55.000 0.00 0.00 33.83 5.14
1048 1056 1.287425 CCAGCGTTATTCTTCGGGAC 58.713 55.000 0.00 0.00 0.00 4.46
1049 1057 1.287425 CAGCGTTATTCTTCGGGACC 58.713 55.000 0.00 0.00 0.00 4.46
1050 1058 1.134788 CAGCGTTATTCTTCGGGACCT 60.135 52.381 0.00 0.00 0.00 3.85
1051 1059 1.553704 AGCGTTATTCTTCGGGACCTT 59.446 47.619 0.00 0.00 0.00 3.50
1052 1060 2.027469 AGCGTTATTCTTCGGGACCTTT 60.027 45.455 0.00 0.00 0.00 3.11
1053 1061 2.350804 GCGTTATTCTTCGGGACCTTTC 59.649 50.000 0.00 0.00 0.00 2.62
1054 1062 3.592059 CGTTATTCTTCGGGACCTTTCA 58.408 45.455 0.00 0.00 0.00 2.69
1055 1063 3.370061 CGTTATTCTTCGGGACCTTTCAC 59.630 47.826 0.00 0.00 0.00 3.18
1068 1076 2.092592 ACCTTTCACGGACCTTGAAACT 60.093 45.455 19.33 7.36 37.91 2.66
1071 1079 2.526304 TCACGGACCTTGAAACTCAG 57.474 50.000 0.00 0.00 0.00 3.35
1108 1116 5.361857 GGAATTGAGATCAATGATTGTGGGT 59.638 40.000 8.76 0.00 45.06 4.51
1127 1135 4.724798 TGGGTACAAGATAGGCCTAAATGT 59.275 41.667 18.42 21.85 0.00 2.71
1136 1144 9.429359 CAAGATAGGCCTAAATGTTGTAGATAG 57.571 37.037 18.42 0.00 0.00 2.08
1154 1162 2.254152 AGTGGTGCCCTGAGATTCTA 57.746 50.000 0.00 0.00 0.00 2.10
1170 1178 9.308000 CTGAGATTCTATTCAGTTAGGATACCT 57.692 37.037 0.00 0.00 36.82 3.08
1223 1231 1.873591 GGCGCGAGATGGAAAATACAT 59.126 47.619 12.10 0.00 0.00 2.29
1266 1274 2.094854 CAGAAGATTTGCAGCAACCCTC 60.095 50.000 7.54 5.42 0.00 4.30
1305 1315 5.193679 GGGAGTTGTCCTTGCATATAGTTT 58.806 41.667 0.00 0.00 43.36 2.66
1330 1340 2.808543 GGGAGTACTCAAAGTTGCAGTG 59.191 50.000 23.91 0.00 0.00 3.66
1374 1384 1.299541 CTGCGTCAACAGTTTGGTCT 58.700 50.000 0.00 0.00 33.06 3.85
1385 1395 4.490706 ACAGTTTGGTCTACCTAAGGAGT 58.509 43.478 0.02 0.00 36.82 3.85
1400 1410 4.963318 AAGGAGTCTGAAATCAGTGTGA 57.037 40.909 10.06 0.00 44.12 3.58
1423 1433 1.949525 GATTACCAATCGCACCAGCAT 59.050 47.619 0.00 0.00 42.27 3.79
1466 1476 6.578020 CATCAGCGTATGCATTTCATTTTT 57.422 33.333 3.54 0.00 46.23 1.94
1528 1538 2.888594 ACCAATGACGAGGATGTTACG 58.111 47.619 0.00 0.00 0.00 3.18
1530 1540 2.159156 CCAATGACGAGGATGTTACGGA 60.159 50.000 0.00 0.00 0.00 4.69
1595 1605 7.559590 ACTTCATACACAGCAAAATCTATCC 57.440 36.000 0.00 0.00 0.00 2.59
1631 1641 1.742411 CGTGTGGTGTCCATGGGTATC 60.742 57.143 13.02 1.95 35.28 2.24
1644 1654 4.446167 CCATGGGTATCCTGCTGTAAATCA 60.446 45.833 2.85 0.00 0.00 2.57
1658 1668 5.278957 GCTGTAAATCATTTTGGTGGTCTGT 60.279 40.000 0.00 0.00 0.00 3.41
1666 1676 3.524095 TTTGGTGGTCTGTGGAATGAT 57.476 42.857 0.00 0.00 0.00 2.45
1701 1711 6.713762 TCAAACATTTGAAGGAGACAACAT 57.286 33.333 4.56 0.00 43.62 2.71
1762 2103 8.323567 AGCAATATCAACAAAAATTCAAGGGAT 58.676 29.630 0.00 0.00 0.00 3.85
1803 2144 5.087323 TGGAACTACTTGAGAGACTCCATT 58.913 41.667 0.00 0.00 29.93 3.16
1829 2170 4.160439 CACCTACTTGTCTCAGCCTAATCA 59.840 45.833 0.00 0.00 0.00 2.57
1841 2182 4.162131 TCAGCCTAATCATGTTACTGCTCA 59.838 41.667 0.00 0.00 0.00 4.26
1888 2229 7.128728 TCAGGGATCCTAAATTTCAGTTGGATA 59.871 37.037 12.58 0.00 34.82 2.59
1909 2332 7.155328 GGATACATTCAGATACCGAACATCTT 58.845 38.462 0.00 0.00 30.18 2.40
1917 2340 6.377429 TCAGATACCGAACATCTTGACTACTT 59.623 38.462 0.00 0.00 30.18 2.24
1928 2351 7.671302 ACATCTTGACTACTTCATAGTGTTGT 58.329 34.615 0.00 0.00 44.64 3.32
1933 2356 6.288294 TGACTACTTCATAGTGTTGTTGCTT 58.712 36.000 0.00 0.00 44.64 3.91
1948 2371 2.157421 GCTTGACTCCAGAAGCACG 58.843 57.895 0.00 0.00 43.44 5.34
1969 2394 2.033424 GTGAAGACACTCAGGTTTTGGC 59.967 50.000 0.00 0.00 42.99 4.52
1979 2404 1.732683 GGTTTTGGCGCATGGAACG 60.733 57.895 10.83 0.00 0.00 3.95
2017 2442 3.973516 ACGCTCGCGGAGTCACAA 61.974 61.111 16.18 0.00 44.69 3.33
2033 2458 6.949352 AGTCACAAATTGAGTCTGACATTT 57.051 33.333 10.88 4.82 31.61 2.32
2063 2488 5.104735 AGGTTTATAGAAGCAGTGAAGAGGG 60.105 44.000 0.00 0.00 0.00 4.30
2064 2489 2.998316 ATAGAAGCAGTGAAGAGGGC 57.002 50.000 0.00 0.00 0.00 5.19
2065 2490 1.644509 TAGAAGCAGTGAAGAGGGCA 58.355 50.000 0.00 0.00 0.00 5.36
2066 2491 0.767375 AGAAGCAGTGAAGAGGGCAA 59.233 50.000 0.00 0.00 0.00 4.52
2067 2492 1.163554 GAAGCAGTGAAGAGGGCAAG 58.836 55.000 0.00 0.00 0.00 4.01
2068 2493 0.475906 AAGCAGTGAAGAGGGCAAGT 59.524 50.000 0.00 0.00 0.00 3.16
2069 2494 0.250640 AGCAGTGAAGAGGGCAAGTG 60.251 55.000 0.00 0.00 0.00 3.16
2070 2495 0.536006 GCAGTGAAGAGGGCAAGTGT 60.536 55.000 0.00 0.00 0.00 3.55
2071 2496 1.972872 CAGTGAAGAGGGCAAGTGTT 58.027 50.000 0.00 0.00 0.00 3.32
2072 2497 1.876156 CAGTGAAGAGGGCAAGTGTTC 59.124 52.381 0.00 0.00 0.00 3.18
2073 2498 1.490490 AGTGAAGAGGGCAAGTGTTCA 59.510 47.619 0.00 0.00 0.00 3.18
2074 2499 1.604278 GTGAAGAGGGCAAGTGTTCAC 59.396 52.381 7.63 7.63 40.02 3.18
2075 2500 1.490490 TGAAGAGGGCAAGTGTTCACT 59.510 47.619 0.00 0.00 0.00 3.41
2076 2501 2.703536 TGAAGAGGGCAAGTGTTCACTA 59.296 45.455 5.87 0.00 0.00 2.74
2077 2502 3.327757 TGAAGAGGGCAAGTGTTCACTAT 59.672 43.478 5.87 0.00 0.00 2.12
2078 2503 4.530553 TGAAGAGGGCAAGTGTTCACTATA 59.469 41.667 5.87 0.00 0.00 1.31
2079 2504 5.012664 TGAAGAGGGCAAGTGTTCACTATAA 59.987 40.000 5.87 0.00 0.00 0.98
2080 2505 5.499004 AGAGGGCAAGTGTTCACTATAAA 57.501 39.130 5.87 0.00 0.00 1.40
2081 2506 5.876357 AGAGGGCAAGTGTTCACTATAAAA 58.124 37.500 5.87 0.00 0.00 1.52
2082 2507 6.303839 AGAGGGCAAGTGTTCACTATAAAAA 58.696 36.000 5.87 0.00 0.00 1.94
2083 2508 6.948309 AGAGGGCAAGTGTTCACTATAAAAAT 59.052 34.615 5.87 0.00 0.00 1.82
2084 2509 6.924111 AGGGCAAGTGTTCACTATAAAAATG 58.076 36.000 5.87 0.82 0.00 2.32
2085 2510 6.719370 AGGGCAAGTGTTCACTATAAAAATGA 59.281 34.615 5.87 0.00 0.00 2.57
2086 2511 6.806739 GGGCAAGTGTTCACTATAAAAATGAC 59.193 38.462 5.87 1.47 0.00 3.06
2087 2512 7.367285 GGCAAGTGTTCACTATAAAAATGACA 58.633 34.615 5.87 0.00 0.00 3.58
2088 2513 8.028938 GGCAAGTGTTCACTATAAAAATGACAT 58.971 33.333 5.87 0.00 0.00 3.06
2089 2514 9.065871 GCAAGTGTTCACTATAAAAATGACATC 57.934 33.333 5.87 0.00 0.00 3.06
2103 2528 7.482654 AAAATGACATCATATCACAGGTACG 57.517 36.000 0.00 0.00 35.10 3.67
2104 2529 4.584327 TGACATCATATCACAGGTACGG 57.416 45.455 0.00 0.00 0.00 4.02
2105 2530 4.211920 TGACATCATATCACAGGTACGGA 58.788 43.478 0.00 0.00 0.00 4.69
2106 2531 4.278419 TGACATCATATCACAGGTACGGAG 59.722 45.833 0.00 0.00 0.00 4.63
2107 2532 3.005897 ACATCATATCACAGGTACGGAGC 59.994 47.826 0.00 0.00 0.00 4.70
2108 2533 1.607148 TCATATCACAGGTACGGAGCG 59.393 52.381 0.00 0.00 0.00 5.03
2109 2534 0.314302 ATATCACAGGTACGGAGCGC 59.686 55.000 0.00 0.00 0.00 5.92
2110 2535 1.731433 TATCACAGGTACGGAGCGCC 61.731 60.000 2.29 0.00 0.00 6.53
2111 2536 4.814294 CACAGGTACGGAGCGCCC 62.814 72.222 2.29 3.94 0.00 6.13
2113 2538 4.814294 CAGGTACGGAGCGCCCAC 62.814 72.222 2.29 0.00 34.14 4.61
2115 2540 4.814294 GGTACGGAGCGCCCACAG 62.814 72.222 2.29 0.00 34.14 3.66
2124 2549 2.360350 CGCCCACAGCACCATCTT 60.360 61.111 0.00 0.00 44.04 2.40
2125 2550 2.693762 CGCCCACAGCACCATCTTG 61.694 63.158 0.00 0.00 44.04 3.02
2126 2551 2.998279 GCCCACAGCACCATCTTGC 61.998 63.158 0.00 0.00 42.97 4.01
2145 2570 0.917259 CGACTAGCATCTGTTCGTGC 59.083 55.000 0.00 0.00 41.57 5.34
2146 2571 1.281899 GACTAGCATCTGTTCGTGCC 58.718 55.000 0.00 0.00 42.20 5.01
2147 2572 0.608130 ACTAGCATCTGTTCGTGCCA 59.392 50.000 0.00 0.00 42.20 4.92
2148 2573 1.002366 CTAGCATCTGTTCGTGCCAC 58.998 55.000 0.00 0.00 42.20 5.01
2149 2574 0.735978 TAGCATCTGTTCGTGCCACG 60.736 55.000 11.80 11.80 42.20 4.94
2150 2575 2.476051 CATCTGTTCGTGCCACGC 59.524 61.111 13.39 0.00 42.21 5.34
2151 2576 3.112075 ATCTGTTCGTGCCACGCG 61.112 61.111 13.39 3.53 42.21 6.01
2154 2579 4.673298 TGTTCGTGCCACGCGGAT 62.673 61.111 13.39 0.00 42.21 4.18
2155 2580 4.147322 GTTCGTGCCACGCGGATG 62.147 66.667 13.39 0.00 42.21 3.51
2160 2585 4.321966 TGCCACGCGGATGGACAA 62.322 61.111 19.07 1.52 43.02 3.18
2161 2586 3.499737 GCCACGCGGATGGACAAG 61.500 66.667 19.07 0.00 43.02 3.16
2162 2587 2.047274 CCACGCGGATGGACAAGT 60.047 61.111 12.47 0.00 43.02 3.16
2163 2588 2.390599 CCACGCGGATGGACAAGTG 61.391 63.158 12.47 0.00 43.02 3.16
2164 2589 2.742372 ACGCGGATGGACAAGTGC 60.742 61.111 12.47 0.00 0.00 4.40
2165 2590 3.853330 CGCGGATGGACAAGTGCG 61.853 66.667 0.00 0.00 39.57 5.34
2166 2591 2.742372 GCGGATGGACAAGTGCGT 60.742 61.111 0.00 0.00 0.00 5.24
2167 2592 1.447140 GCGGATGGACAAGTGCGTA 60.447 57.895 0.00 0.00 0.00 4.42
2168 2593 1.017177 GCGGATGGACAAGTGCGTAA 61.017 55.000 0.00 0.00 0.00 3.18
2169 2594 0.999406 CGGATGGACAAGTGCGTAAG 59.001 55.000 0.00 0.00 43.44 2.34
2196 2621 2.526888 CCCCCACAGTCTAGTCTACA 57.473 55.000 0.00 0.00 0.00 2.74
2197 2622 2.816411 CCCCCACAGTCTAGTCTACAA 58.184 52.381 0.00 0.00 0.00 2.41
2198 2623 2.496470 CCCCCACAGTCTAGTCTACAAC 59.504 54.545 0.00 0.00 0.00 3.32
2199 2624 2.163815 CCCCACAGTCTAGTCTACAACG 59.836 54.545 0.00 0.00 0.00 4.10
2200 2625 3.079578 CCCACAGTCTAGTCTACAACGA 58.920 50.000 0.00 0.00 0.00 3.85
2201 2626 3.504906 CCCACAGTCTAGTCTACAACGAA 59.495 47.826 0.00 0.00 0.00 3.85
2202 2627 4.022589 CCCACAGTCTAGTCTACAACGAAA 60.023 45.833 0.00 0.00 0.00 3.46
2203 2628 4.916249 CCACAGTCTAGTCTACAACGAAAC 59.084 45.833 0.00 0.00 0.00 2.78
2204 2629 4.916249 CACAGTCTAGTCTACAACGAAACC 59.084 45.833 0.00 0.00 0.00 3.27
2205 2630 4.022503 ACAGTCTAGTCTACAACGAAACCC 60.023 45.833 0.00 0.00 0.00 4.11
2206 2631 3.190118 AGTCTAGTCTACAACGAAACCCG 59.810 47.826 0.00 0.00 45.44 5.28
2207 2632 2.489329 TCTAGTCTACAACGAAACCCGG 59.511 50.000 0.00 0.00 43.93 5.73
2208 2633 1.331214 AGTCTACAACGAAACCCGGA 58.669 50.000 0.73 0.00 43.93 5.14
2209 2634 1.271656 AGTCTACAACGAAACCCGGAG 59.728 52.381 0.73 0.00 43.93 4.63
2210 2635 1.270550 GTCTACAACGAAACCCGGAGA 59.729 52.381 0.73 0.00 43.93 3.71
2211 2636 1.270550 TCTACAACGAAACCCGGAGAC 59.729 52.381 0.73 0.00 43.93 3.36
2212 2637 0.318120 TACAACGAAACCCGGAGACC 59.682 55.000 0.73 0.00 43.93 3.85
2214 2639 2.501602 AACGAAACCCGGAGACCGT 61.502 57.895 0.73 4.36 46.80 4.83
2215 2640 1.178534 AACGAAACCCGGAGACCGTA 61.179 55.000 0.73 0.00 46.80 4.02
2216 2641 1.153958 CGAAACCCGGAGACCGTAC 60.154 63.158 0.73 0.00 46.80 3.67
2217 2642 1.216444 GAAACCCGGAGACCGTACC 59.784 63.158 0.73 0.00 46.80 3.34
2218 2643 1.533753 AAACCCGGAGACCGTACCA 60.534 57.895 0.73 0.00 46.80 3.25
2219 2644 1.538687 AAACCCGGAGACCGTACCAG 61.539 60.000 0.73 0.00 46.80 4.00
2220 2645 2.362120 CCCGGAGACCGTACCAGT 60.362 66.667 0.73 0.00 46.80 4.00
2221 2646 2.707849 CCCGGAGACCGTACCAGTG 61.708 68.421 0.73 0.00 46.80 3.66
2222 2647 1.975407 CCGGAGACCGTACCAGTGT 60.975 63.158 0.00 0.00 46.80 3.55
2223 2648 1.505353 CGGAGACCGTACCAGTGTC 59.495 63.158 1.80 0.50 42.73 3.67
2224 2649 1.505353 GGAGACCGTACCAGTGTCG 59.495 63.158 2.84 0.00 34.24 4.35
2225 2650 1.154073 GAGACCGTACCAGTGTCGC 60.154 63.158 0.00 0.00 34.24 5.19
2226 2651 2.503375 GACCGTACCAGTGTCGCG 60.503 66.667 0.00 0.00 0.00 5.87
2227 2652 3.259425 GACCGTACCAGTGTCGCGT 62.259 63.158 5.77 0.00 0.00 6.01
2228 2653 2.503375 CCGTACCAGTGTCGCGTC 60.503 66.667 5.77 0.00 0.00 5.19
2229 2654 2.559840 CGTACCAGTGTCGCGTCT 59.440 61.111 5.77 0.21 0.00 4.18
2230 2655 1.796355 CGTACCAGTGTCGCGTCTG 60.796 63.158 5.77 13.18 0.00 3.51
2231 2656 2.087009 GTACCAGTGTCGCGTCTGC 61.087 63.158 5.77 0.00 37.91 4.26
2232 2657 2.265904 TACCAGTGTCGCGTCTGCT 61.266 57.895 5.77 0.27 39.65 4.24
2233 2658 2.196382 TACCAGTGTCGCGTCTGCTC 62.196 60.000 5.77 0.00 39.65 4.26
2234 2659 3.168604 CAGTGTCGCGTCTGCTCG 61.169 66.667 5.77 0.00 39.65 5.03
2248 2673 3.458163 CTCGCCCGAGCTACCCAA 61.458 66.667 4.63 0.00 35.31 4.12
2249 2674 3.718210 CTCGCCCGAGCTACCCAAC 62.718 68.421 4.63 0.00 35.31 3.77
2250 2675 4.077184 CGCCCGAGCTACCCAACA 62.077 66.667 0.00 0.00 36.60 3.33
2251 2676 2.125106 GCCCGAGCTACCCAACAG 60.125 66.667 0.00 0.00 35.50 3.16
2252 2677 2.656069 GCCCGAGCTACCCAACAGA 61.656 63.158 0.00 0.00 35.50 3.41
2253 2678 1.972660 GCCCGAGCTACCCAACAGAT 61.973 60.000 0.00 0.00 35.50 2.90
2254 2679 0.179073 CCCGAGCTACCCAACAGATG 60.179 60.000 0.00 0.00 0.00 2.90
2255 2680 0.811616 CCGAGCTACCCAACAGATGC 60.812 60.000 0.00 0.00 0.00 3.91
2256 2681 1.148157 CGAGCTACCCAACAGATGCG 61.148 60.000 0.00 0.00 0.00 4.73
2257 2682 1.432270 GAGCTACCCAACAGATGCGC 61.432 60.000 0.00 0.00 0.00 6.09
2258 2683 2.813179 GCTACCCAACAGATGCGCG 61.813 63.158 0.00 0.00 0.00 6.86
2259 2684 2.813179 CTACCCAACAGATGCGCGC 61.813 63.158 27.26 27.26 0.00 6.86
2260 2685 3.597675 TACCCAACAGATGCGCGCA 62.598 57.895 38.27 38.27 0.00 6.09
2261 2686 3.736100 CCCAACAGATGCGCGCAA 61.736 61.111 39.68 21.85 0.00 4.85
2262 2687 2.202388 CCAACAGATGCGCGCAAG 60.202 61.111 39.68 30.40 43.44 4.01
2281 2706 4.609018 CGCCGCCCCTATGGTCTG 62.609 72.222 0.00 0.00 36.04 3.51
2282 2707 4.256180 GCCGCCCCTATGGTCTGG 62.256 72.222 0.00 0.00 36.04 3.86
2283 2708 2.768344 CCGCCCCTATGGTCTGGT 60.768 66.667 0.00 0.00 36.04 4.00
2284 2709 2.808206 CCGCCCCTATGGTCTGGTC 61.808 68.421 0.00 0.00 36.04 4.02
2285 2710 1.762460 CGCCCCTATGGTCTGGTCT 60.762 63.158 0.00 0.00 36.04 3.85
2286 2711 1.338136 CGCCCCTATGGTCTGGTCTT 61.338 60.000 0.00 0.00 36.04 3.01
2287 2712 0.470341 GCCCCTATGGTCTGGTCTTC 59.530 60.000 0.00 0.00 36.04 2.87
2288 2713 1.879575 CCCCTATGGTCTGGTCTTCA 58.120 55.000 0.00 0.00 0.00 3.02
2289 2714 1.486726 CCCCTATGGTCTGGTCTTCAC 59.513 57.143 0.00 0.00 0.00 3.18
2290 2715 1.486726 CCCTATGGTCTGGTCTTCACC 59.513 57.143 0.00 0.00 44.10 4.02
2299 2724 2.317230 GGTCTTCACCAACACACCG 58.683 57.895 0.00 0.00 43.17 4.94
2300 2725 1.647084 GTCTTCACCAACACACCGC 59.353 57.895 0.00 0.00 0.00 5.68
2301 2726 1.885388 TCTTCACCAACACACCGCG 60.885 57.895 0.00 0.00 0.00 6.46
2302 2727 2.125065 TTCACCAACACACCGCGT 60.125 55.556 4.92 0.00 0.00 6.01
2303 2728 2.101209 CTTCACCAACACACCGCGTC 62.101 60.000 4.92 0.00 0.00 5.19
2304 2729 3.995669 CACCAACACACCGCGTCG 61.996 66.667 4.92 0.00 0.00 5.12
2315 2740 4.678269 CGCGTCGGAGTCACACGT 62.678 66.667 12.98 0.00 35.91 4.49
2316 2741 2.799916 GCGTCGGAGTCACACGTC 60.800 66.667 12.98 4.22 35.91 4.34
2317 2742 2.126965 CGTCGGAGTCACACGTCC 60.127 66.667 5.21 0.00 0.00 4.79
2321 2746 2.733593 GGAGTCACACGTCCGCAC 60.734 66.667 0.00 0.00 0.00 5.34
2322 2747 2.733593 GAGTCACACGTCCGCACC 60.734 66.667 0.00 0.00 0.00 5.01
2323 2748 4.640855 AGTCACACGTCCGCACCG 62.641 66.667 0.00 0.00 0.00 4.94
2333 2758 2.552268 CCGCACCGGTTTACAACG 59.448 61.111 2.97 1.82 42.73 4.10
2334 2759 2.127534 CGCACCGGTTTACAACGC 60.128 61.111 2.97 1.67 0.00 4.84
2335 2760 2.253154 GCACCGGTTTACAACGCC 59.747 61.111 2.97 0.00 0.00 5.68
2336 2761 2.552268 CACCGGTTTACAACGCCG 59.448 61.111 2.97 0.00 44.55 6.46
2337 2762 2.108771 ACCGGTTTACAACGCCGT 59.891 55.556 0.00 0.00 43.56 5.68
2338 2763 2.246042 ACCGGTTTACAACGCCGTG 61.246 57.895 0.00 0.00 43.56 4.94
2339 2764 2.246042 CCGGTTTACAACGCCGTGT 61.246 57.895 0.00 0.00 43.56 4.49
2340 2765 1.083273 CGGTTTACAACGCCGTGTG 60.083 57.895 0.00 0.00 40.53 3.82
2341 2766 1.369568 GGTTTACAACGCCGTGTGC 60.370 57.895 0.00 0.00 32.75 4.57
2342 2767 1.352404 GTTTACAACGCCGTGTGCA 59.648 52.632 0.00 0.00 41.33 4.57
2343 2768 0.248134 GTTTACAACGCCGTGTGCAA 60.248 50.000 0.00 0.00 41.33 4.08
2344 2769 0.248134 TTTACAACGCCGTGTGCAAC 60.248 50.000 0.00 0.00 41.33 4.17
2345 2770 1.090625 TTACAACGCCGTGTGCAACT 61.091 50.000 0.00 0.00 41.33 3.16
2346 2771 1.492319 TACAACGCCGTGTGCAACTC 61.492 55.000 0.00 0.00 41.33 3.01
2353 2778 2.846918 GTGTGCAACTCGAGCGTC 59.153 61.111 13.61 1.67 38.04 5.19
2354 2779 2.355837 TGTGCAACTCGAGCGTCC 60.356 61.111 13.61 0.00 38.04 4.79
2355 2780 2.355837 GTGCAACTCGAGCGTCCA 60.356 61.111 13.61 1.76 33.85 4.02
2356 2781 2.355837 TGCAACTCGAGCGTCCAC 60.356 61.111 13.61 0.00 33.85 4.02
2357 2782 3.470567 GCAACTCGAGCGTCCACG 61.471 66.667 13.61 0.00 43.27 4.94
2367 2792 2.048597 CGTCCACGCCAGCTTACA 60.049 61.111 0.00 0.00 0.00 2.41
2368 2793 1.666553 CGTCCACGCCAGCTTACAA 60.667 57.895 0.00 0.00 0.00 2.41
2369 2794 1.866925 GTCCACGCCAGCTTACAAC 59.133 57.895 0.00 0.00 0.00 3.32
2370 2795 1.666553 TCCACGCCAGCTTACAACG 60.667 57.895 0.00 0.00 0.00 4.10
2371 2796 2.173382 CACGCCAGCTTACAACGC 59.827 61.111 0.00 0.00 0.00 4.84
2372 2797 3.047877 ACGCCAGCTTACAACGCC 61.048 61.111 0.00 0.00 0.00 5.68
2373 2798 4.147322 CGCCAGCTTACAACGCCG 62.147 66.667 0.00 0.00 0.00 6.46
2374 2799 4.460873 GCCAGCTTACAACGCCGC 62.461 66.667 0.00 0.00 0.00 6.53
2375 2800 4.147322 CCAGCTTACAACGCCGCG 62.147 66.667 12.14 12.14 0.00 6.46
2376 2801 4.147322 CAGCTTACAACGCCGCGG 62.147 66.667 24.05 24.05 0.00 6.46
2377 2802 4.675029 AGCTTACAACGCCGCGGT 62.675 61.111 28.70 7.90 0.00 5.68
2378 2803 4.143363 GCTTACAACGCCGCGGTC 62.143 66.667 28.70 18.03 0.00 4.79
2379 2804 3.834373 CTTACAACGCCGCGGTCG 61.834 66.667 30.82 30.82 0.00 4.79
2380 2805 4.340019 TTACAACGCCGCGGTCGA 62.340 61.111 36.24 18.93 38.10 4.20
2388 2813 3.744719 CCGCGGTCGACTCTTCCA 61.745 66.667 19.50 0.00 38.10 3.53
2389 2814 2.490217 CGCGGTCGACTCTTCCAT 59.510 61.111 16.46 0.00 38.10 3.41
2390 2815 1.586564 CGCGGTCGACTCTTCCATC 60.587 63.158 16.46 0.00 38.10 3.51
2391 2816 1.227002 GCGGTCGACTCTTCCATCC 60.227 63.158 16.46 0.00 0.00 3.51
2392 2817 1.945354 GCGGTCGACTCTTCCATCCA 61.945 60.000 16.46 0.00 0.00 3.41
2393 2818 0.747255 CGGTCGACTCTTCCATCCAT 59.253 55.000 16.46 0.00 0.00 3.41
2394 2819 1.536922 CGGTCGACTCTTCCATCCATG 60.537 57.143 16.46 0.00 0.00 3.66
2395 2820 1.576356 GTCGACTCTTCCATCCATGC 58.424 55.000 8.70 0.00 0.00 4.06
2396 2821 1.134699 GTCGACTCTTCCATCCATGCA 60.135 52.381 8.70 0.00 0.00 3.96
2397 2822 1.137675 TCGACTCTTCCATCCATGCAG 59.862 52.381 0.00 0.00 0.00 4.41
2398 2823 1.134580 CGACTCTTCCATCCATGCAGT 60.135 52.381 0.00 0.00 0.00 4.40
2399 2824 2.559440 GACTCTTCCATCCATGCAGTC 58.441 52.381 0.00 0.00 0.00 3.51
2400 2825 2.170187 GACTCTTCCATCCATGCAGTCT 59.830 50.000 0.00 0.00 0.00 3.24
2401 2826 2.575279 ACTCTTCCATCCATGCAGTCTT 59.425 45.455 0.00 0.00 0.00 3.01
2402 2827 3.776969 ACTCTTCCATCCATGCAGTCTTA 59.223 43.478 0.00 0.00 0.00 2.10
2403 2828 4.125703 CTCTTCCATCCATGCAGTCTTAC 58.874 47.826 0.00 0.00 0.00 2.34
2404 2829 3.519107 TCTTCCATCCATGCAGTCTTACA 59.481 43.478 0.00 0.00 0.00 2.41
2405 2830 3.998913 TCCATCCATGCAGTCTTACAA 57.001 42.857 0.00 0.00 0.00 2.41
2406 2831 3.609853 TCCATCCATGCAGTCTTACAAC 58.390 45.455 0.00 0.00 0.00 3.32
2407 2832 3.008923 TCCATCCATGCAGTCTTACAACA 59.991 43.478 0.00 0.00 0.00 3.33
2408 2833 3.949754 CCATCCATGCAGTCTTACAACAT 59.050 43.478 0.00 0.00 0.00 2.71
2409 2834 4.400251 CCATCCATGCAGTCTTACAACATT 59.600 41.667 0.00 0.00 0.00 2.71
2410 2835 5.337554 CATCCATGCAGTCTTACAACATTG 58.662 41.667 0.00 0.00 0.00 2.82
2411 2836 3.191162 TCCATGCAGTCTTACAACATTGC 59.809 43.478 0.00 0.00 0.00 3.56
2412 2837 2.967459 TGCAGTCTTACAACATTGCG 57.033 45.000 0.00 0.00 34.44 4.85
2413 2838 1.535028 TGCAGTCTTACAACATTGCGG 59.465 47.619 0.00 0.00 34.44 5.69
2414 2839 1.535462 GCAGTCTTACAACATTGCGGT 59.465 47.619 0.00 0.00 0.00 5.68
2415 2840 2.412847 GCAGTCTTACAACATTGCGGTC 60.413 50.000 0.00 0.00 0.00 4.79
2416 2841 2.066262 AGTCTTACAACATTGCGGTCG 58.934 47.619 0.00 0.00 0.00 4.79
2417 2842 2.063266 GTCTTACAACATTGCGGTCGA 58.937 47.619 0.00 0.00 0.00 4.20
2418 2843 2.063266 TCTTACAACATTGCGGTCGAC 58.937 47.619 7.13 7.13 0.00 4.20
2419 2844 2.066262 CTTACAACATTGCGGTCGACT 58.934 47.619 16.46 0.00 0.00 4.18
2420 2845 1.424403 TACAACATTGCGGTCGACTG 58.576 50.000 20.35 20.35 0.00 3.51
2421 2846 0.531974 ACAACATTGCGGTCGACTGT 60.532 50.000 24.68 13.42 0.00 3.55
2422 2847 0.163788 CAACATTGCGGTCGACTGTC 59.836 55.000 24.68 17.06 0.00 3.51
2423 2848 0.033504 AACATTGCGGTCGACTGTCT 59.966 50.000 24.68 7.83 0.00 3.41
2424 2849 0.388649 ACATTGCGGTCGACTGTCTC 60.389 55.000 24.68 9.66 0.00 3.36
2425 2850 0.388520 CATTGCGGTCGACTGTCTCA 60.389 55.000 24.68 12.18 0.00 3.27
2426 2851 0.532573 ATTGCGGTCGACTGTCTCAT 59.467 50.000 24.68 9.56 0.00 2.90
2427 2852 0.317160 TTGCGGTCGACTGTCTCATT 59.683 50.000 24.68 0.00 0.00 2.57
2428 2853 0.109272 TGCGGTCGACTGTCTCATTC 60.109 55.000 24.68 7.53 0.00 2.67
2429 2854 0.109272 GCGGTCGACTGTCTCATTCA 60.109 55.000 24.68 0.00 0.00 2.57
2430 2855 1.618861 CGGTCGACTGTCTCATTCAC 58.381 55.000 16.54 0.00 0.00 3.18
2431 2856 1.618861 GGTCGACTGTCTCATTCACG 58.381 55.000 16.46 0.00 0.00 4.35
2432 2857 0.985549 GTCGACTGTCTCATTCACGC 59.014 55.000 8.70 0.00 0.00 5.34
2433 2858 0.109272 TCGACTGTCTCATTCACGCC 60.109 55.000 6.21 0.00 0.00 5.68
2434 2859 1.406219 CGACTGTCTCATTCACGCCG 61.406 60.000 6.21 0.00 0.00 6.46
2435 2860 1.078759 GACTGTCTCATTCACGCCGG 61.079 60.000 0.00 0.00 0.00 6.13
2436 2861 2.434185 TGTCTCATTCACGCCGGC 60.434 61.111 19.07 19.07 0.00 6.13
2437 2862 2.434185 GTCTCATTCACGCCGGCA 60.434 61.111 28.98 7.02 0.00 5.69
2438 2863 1.815421 GTCTCATTCACGCCGGCAT 60.815 57.895 28.98 8.91 0.00 4.40
2439 2864 0.529773 GTCTCATTCACGCCGGCATA 60.530 55.000 28.98 7.90 0.00 3.14
2440 2865 0.529773 TCTCATTCACGCCGGCATAC 60.530 55.000 28.98 0.00 0.00 2.39
2441 2866 0.809636 CTCATTCACGCCGGCATACA 60.810 55.000 28.98 7.64 0.00 2.29
2442 2867 0.391793 TCATTCACGCCGGCATACAA 60.392 50.000 28.98 13.39 0.00 2.41
2443 2868 0.449786 CATTCACGCCGGCATACAAA 59.550 50.000 28.98 13.00 0.00 2.83
2444 2869 0.732571 ATTCACGCCGGCATACAAAG 59.267 50.000 28.98 10.77 0.00 2.77
2445 2870 1.917782 TTCACGCCGGCATACAAAGC 61.918 55.000 28.98 0.00 0.00 3.51
2451 2876 2.102946 GGCATACAAAGCCGCAGC 59.897 61.111 0.00 0.00 43.15 5.25
2464 2889 3.474034 GCAGCTGACTCACGCGTC 61.474 66.667 20.43 0.00 34.52 5.19
2465 2890 2.807045 CAGCTGACTCACGCGTCC 60.807 66.667 9.86 0.00 32.97 4.79
2466 2891 4.406173 AGCTGACTCACGCGTCCG 62.406 66.667 9.86 5.64 41.14 4.79
2479 2904 3.039588 GTCCGCGCCAACTTCGAA 61.040 61.111 0.00 0.00 0.00 3.71
2480 2905 3.039588 TCCGCGCCAACTTCGAAC 61.040 61.111 0.00 0.00 0.00 3.95
2481 2906 3.342627 CCGCGCCAACTTCGAACA 61.343 61.111 0.00 0.00 0.00 3.18
2482 2907 2.677003 CCGCGCCAACTTCGAACAT 61.677 57.895 0.00 0.00 0.00 2.71
2483 2908 1.225745 CGCGCCAACTTCGAACATC 60.226 57.895 0.00 0.00 0.00 3.06
2484 2909 1.225745 GCGCCAACTTCGAACATCG 60.226 57.895 0.00 0.00 42.10 3.84
2485 2910 1.897398 GCGCCAACTTCGAACATCGT 61.897 55.000 0.00 0.00 41.35 3.73
2486 2911 0.179250 CGCCAACTTCGAACATCGTG 60.179 55.000 0.00 0.00 41.35 4.35
2487 2912 0.165944 GCCAACTTCGAACATCGTGG 59.834 55.000 0.00 0.00 41.35 4.94
2488 2913 0.165944 CCAACTTCGAACATCGTGGC 59.834 55.000 0.00 0.00 41.35 5.01
2489 2914 0.165944 CAACTTCGAACATCGTGGCC 59.834 55.000 0.00 0.00 41.35 5.36
2490 2915 1.289109 AACTTCGAACATCGTGGCCG 61.289 55.000 0.00 0.00 41.35 6.13
2505 2930 2.595463 CCGACCCCCGCGTCTATA 60.595 66.667 4.92 0.00 36.84 1.31
2506 2931 1.975407 CCGACCCCCGCGTCTATAT 60.975 63.158 4.92 0.00 36.84 0.86
2507 2932 1.505353 CGACCCCCGCGTCTATATC 59.495 63.158 4.92 0.00 0.00 1.63
2508 2933 1.239296 CGACCCCCGCGTCTATATCA 61.239 60.000 4.92 0.00 0.00 2.15
2509 2934 0.963962 GACCCCCGCGTCTATATCAA 59.036 55.000 4.92 0.00 0.00 2.57
2510 2935 0.677842 ACCCCCGCGTCTATATCAAC 59.322 55.000 4.92 0.00 0.00 3.18
2511 2936 0.677288 CCCCCGCGTCTATATCAACA 59.323 55.000 4.92 0.00 0.00 3.33
2512 2937 1.069513 CCCCCGCGTCTATATCAACAA 59.930 52.381 4.92 0.00 0.00 2.83
2513 2938 2.484065 CCCCCGCGTCTATATCAACAAA 60.484 50.000 4.92 0.00 0.00 2.83
2514 2939 2.542595 CCCCGCGTCTATATCAACAAAC 59.457 50.000 4.92 0.00 0.00 2.93
2515 2940 2.542595 CCCGCGTCTATATCAACAAACC 59.457 50.000 4.92 0.00 0.00 3.27
2516 2941 2.217847 CCGCGTCTATATCAACAAACCG 59.782 50.000 4.92 0.00 0.00 4.44
2517 2942 2.217847 CGCGTCTATATCAACAAACCGG 59.782 50.000 0.00 0.00 0.00 5.28
2518 2943 3.450578 GCGTCTATATCAACAAACCGGA 58.549 45.455 9.46 0.00 0.00 5.14
2519 2944 3.489785 GCGTCTATATCAACAAACCGGAG 59.510 47.826 9.46 0.00 0.00 4.63
2520 2945 4.679662 CGTCTATATCAACAAACCGGAGT 58.320 43.478 9.46 0.00 0.00 3.85
2521 2946 4.738740 CGTCTATATCAACAAACCGGAGTC 59.261 45.833 9.46 0.00 0.00 3.36
2522 2947 4.738740 GTCTATATCAACAAACCGGAGTCG 59.261 45.833 9.46 0.00 0.00 4.18
2523 2948 1.717194 TATCAACAAACCGGAGTCGC 58.283 50.000 9.46 0.00 34.56 5.19
2524 2949 0.250124 ATCAACAAACCGGAGTCGCA 60.250 50.000 9.46 0.00 34.56 5.10
2525 2950 1.155424 TCAACAAACCGGAGTCGCAC 61.155 55.000 9.46 0.00 34.56 5.34
2526 2951 1.890510 AACAAACCGGAGTCGCACC 60.891 57.895 9.46 0.00 34.56 5.01
2527 2952 3.047877 CAAACCGGAGTCGCACCC 61.048 66.667 9.46 0.00 34.56 4.61
2528 2953 4.675029 AAACCGGAGTCGCACCCG 62.675 66.667 9.46 0.00 44.94 5.28
2550 2975 2.787249 CACGAATTGCTCAGCGGG 59.213 61.111 0.00 0.00 0.00 6.13
2551 2976 3.127533 ACGAATTGCTCAGCGGGC 61.128 61.111 0.00 0.00 0.00 6.13
2552 2977 4.228097 CGAATTGCTCAGCGGGCG 62.228 66.667 0.00 0.00 0.00 6.13
2553 2978 4.543084 GAATTGCTCAGCGGGCGC 62.543 66.667 0.00 0.00 42.33 6.53
2574 2999 4.569180 CAGGCCGCCACCCCTATG 62.569 72.222 13.15 0.00 0.00 2.23
2576 3001 4.564110 GGCCGCCACCCCTATGTC 62.564 72.222 3.91 0.00 0.00 3.06
2577 3002 4.564110 GCCGCCACCCCTATGTCC 62.564 72.222 0.00 0.00 0.00 4.02
2578 3003 3.873812 CCGCCACCCCTATGTCCC 61.874 72.222 0.00 0.00 0.00 4.46
2579 3004 3.087253 CGCCACCCCTATGTCCCA 61.087 66.667 0.00 0.00 0.00 4.37
2580 3005 2.919043 GCCACCCCTATGTCCCAG 59.081 66.667 0.00 0.00 0.00 4.45
2581 3006 2.001269 GCCACCCCTATGTCCCAGT 61.001 63.158 0.00 0.00 0.00 4.00
2582 3007 1.984288 GCCACCCCTATGTCCCAGTC 61.984 65.000 0.00 0.00 0.00 3.51
2583 3008 0.326618 CCACCCCTATGTCCCAGTCT 60.327 60.000 0.00 0.00 0.00 3.24
2584 3009 1.062428 CCACCCCTATGTCCCAGTCTA 60.062 57.143 0.00 0.00 0.00 2.59
2585 3010 2.040178 CACCCCTATGTCCCAGTCTAC 58.960 57.143 0.00 0.00 0.00 2.59
2586 3011 1.938069 ACCCCTATGTCCCAGTCTACT 59.062 52.381 0.00 0.00 0.00 2.57
2587 3012 2.091222 ACCCCTATGTCCCAGTCTACTC 60.091 54.545 0.00 0.00 0.00 2.59
2588 3013 2.599677 CCCTATGTCCCAGTCTACTCC 58.400 57.143 0.00 0.00 0.00 3.85
2589 3014 2.091278 CCCTATGTCCCAGTCTACTCCA 60.091 54.545 0.00 0.00 0.00 3.86
2590 3015 3.438668 CCCTATGTCCCAGTCTACTCCAT 60.439 52.174 0.00 0.00 0.00 3.41
2591 3016 3.829601 CCTATGTCCCAGTCTACTCCATC 59.170 52.174 0.00 0.00 0.00 3.51
2592 3017 2.919772 TGTCCCAGTCTACTCCATCA 57.080 50.000 0.00 0.00 0.00 3.07
2593 3018 3.184382 TGTCCCAGTCTACTCCATCAA 57.816 47.619 0.00 0.00 0.00 2.57
2594 3019 2.832129 TGTCCCAGTCTACTCCATCAAC 59.168 50.000 0.00 0.00 0.00 3.18
2595 3020 3.100671 GTCCCAGTCTACTCCATCAACT 58.899 50.000 0.00 0.00 0.00 3.16
2596 3021 3.131400 GTCCCAGTCTACTCCATCAACTC 59.869 52.174 0.00 0.00 0.00 3.01
2597 3022 3.011821 TCCCAGTCTACTCCATCAACTCT 59.988 47.826 0.00 0.00 0.00 3.24
2598 3023 3.131933 CCCAGTCTACTCCATCAACTCTG 59.868 52.174 0.00 0.00 0.00 3.35
2599 3024 3.131933 CCAGTCTACTCCATCAACTCTGG 59.868 52.174 0.00 0.00 34.91 3.86
2600 3025 4.019858 CAGTCTACTCCATCAACTCTGGA 58.980 47.826 0.00 0.00 40.49 3.86
2606 3031 3.507162 TCCATCAACTCTGGAGCAAAA 57.493 42.857 0.00 0.00 37.87 2.44
2607 3032 3.831323 TCCATCAACTCTGGAGCAAAAA 58.169 40.909 0.00 0.00 37.87 1.94
2629 3054 7.582667 AAAATAACATATTACCAGCCTCCAC 57.417 36.000 0.00 0.00 0.00 4.02
2630 3055 3.577805 AACATATTACCAGCCTCCACC 57.422 47.619 0.00 0.00 0.00 4.61
2631 3056 2.776665 ACATATTACCAGCCTCCACCT 58.223 47.619 0.00 0.00 0.00 4.00
2632 3057 2.439507 ACATATTACCAGCCTCCACCTG 59.560 50.000 0.00 0.00 0.00 4.00
2633 3058 0.837272 TATTACCAGCCTCCACCTGC 59.163 55.000 0.00 0.00 0.00 4.85
2634 3059 1.207488 ATTACCAGCCTCCACCTGCA 61.207 55.000 0.00 0.00 0.00 4.41
2635 3060 2.124507 TTACCAGCCTCCACCTGCAC 62.125 60.000 0.00 0.00 0.00 4.57
2636 3061 4.729918 CCAGCCTCCACCTGCACC 62.730 72.222 0.00 0.00 0.00 5.01
2640 3065 3.402681 CCTCCACCTGCACCGGAT 61.403 66.667 9.46 0.00 0.00 4.18
2641 3066 2.124983 CTCCACCTGCACCGGATG 60.125 66.667 9.46 3.68 0.00 3.51
2642 3067 3.687321 CTCCACCTGCACCGGATGG 62.687 68.421 9.46 6.86 42.84 3.51
2644 3069 4.415150 CACCTGCACCGGATGGCT 62.415 66.667 9.46 0.00 39.70 4.75
2645 3070 4.101448 ACCTGCACCGGATGGCTC 62.101 66.667 9.46 0.00 39.70 4.70
2646 3071 4.100084 CCTGCACCGGATGGCTCA 62.100 66.667 9.46 0.00 39.70 4.26
2647 3072 2.046023 CTGCACCGGATGGCTCAA 60.046 61.111 9.46 0.00 39.70 3.02
2648 3073 1.452651 CTGCACCGGATGGCTCAAT 60.453 57.895 9.46 0.00 39.70 2.57
2649 3074 1.721664 CTGCACCGGATGGCTCAATG 61.722 60.000 9.46 0.00 39.70 2.82
2650 3075 2.484062 GCACCGGATGGCTCAATGG 61.484 63.158 9.46 0.00 39.70 3.16
2651 3076 1.825191 CACCGGATGGCTCAATGGG 60.825 63.158 9.46 0.00 39.70 4.00
2652 3077 2.908940 CCGGATGGCTCAATGGGC 60.909 66.667 0.00 0.00 0.00 5.36
2653 3078 2.124193 CGGATGGCTCAATGGGCA 60.124 61.111 7.65 3.82 45.45 5.36
2657 3082 3.142162 TGGCTCAATGGGCATGCG 61.142 61.111 12.44 0.00 36.85 4.73
2658 3083 4.580551 GGCTCAATGGGCATGCGC 62.581 66.667 26.55 26.55 37.44 6.09
2659 3084 3.829044 GCTCAATGGGCATGCGCA 61.829 61.111 35.56 35.56 42.90 6.09
2660 3085 2.103538 CTCAATGGGCATGCGCAC 59.896 61.111 36.11 17.96 44.19 5.34
2666 3091 4.465512 GGGCATGCGCACAAGTCG 62.466 66.667 28.03 0.00 43.03 4.18
2675 3100 3.716006 CACAAGTCGCCGCCACTG 61.716 66.667 0.00 0.00 0.00 3.66
2686 3111 2.904866 GCCACTGCGGTTTGGTCA 60.905 61.111 0.00 0.00 36.97 4.02
2687 3112 2.485795 GCCACTGCGGTTTGGTCAA 61.486 57.895 0.00 0.00 36.97 3.18
2688 3113 1.358759 CCACTGCGGTTTGGTCAAC 59.641 57.895 0.00 0.00 34.18 3.18
2689 3114 1.101049 CCACTGCGGTTTGGTCAACT 61.101 55.000 0.00 0.00 35.46 3.16
2690 3115 0.738389 CACTGCGGTTTGGTCAACTT 59.262 50.000 0.00 0.00 35.46 2.66
2691 3116 1.134175 CACTGCGGTTTGGTCAACTTT 59.866 47.619 0.00 0.00 35.46 2.66
2692 3117 2.356382 CACTGCGGTTTGGTCAACTTTA 59.644 45.455 0.00 0.00 35.46 1.85
2693 3118 3.018149 ACTGCGGTTTGGTCAACTTTAA 58.982 40.909 0.00 0.00 35.46 1.52
2694 3119 3.181494 ACTGCGGTTTGGTCAACTTTAAC 60.181 43.478 0.00 0.00 35.46 2.01
2695 3120 2.753452 TGCGGTTTGGTCAACTTTAACA 59.247 40.909 0.00 0.00 35.46 2.41
2696 3121 3.192844 TGCGGTTTGGTCAACTTTAACAA 59.807 39.130 0.00 0.00 35.46 2.83
2697 3122 3.794564 GCGGTTTGGTCAACTTTAACAAG 59.205 43.478 0.00 0.00 35.46 3.16
2698 3123 3.794564 CGGTTTGGTCAACTTTAACAAGC 59.205 43.478 0.00 0.00 35.46 4.01
2699 3124 4.116961 GGTTTGGTCAACTTTAACAAGCC 58.883 43.478 0.00 0.00 35.75 4.35
2700 3125 4.382147 GGTTTGGTCAACTTTAACAAGCCA 60.382 41.667 2.59 0.00 40.65 4.75
2701 3126 4.379339 TTGGTCAACTTTAACAAGCCAC 57.621 40.909 0.00 0.00 32.57 5.01
2702 3127 2.691011 TGGTCAACTTTAACAAGCCACC 59.309 45.455 0.00 0.00 32.57 4.61
2703 3128 2.287368 GGTCAACTTTAACAAGCCACCG 60.287 50.000 0.00 0.00 32.57 4.94
2704 3129 1.950909 TCAACTTTAACAAGCCACCGG 59.049 47.619 0.00 0.00 32.57 5.28
2705 3130 1.000717 CAACTTTAACAAGCCACCGGG 60.001 52.381 6.32 0.00 32.57 5.73
2706 3131 0.184211 ACTTTAACAAGCCACCGGGT 59.816 50.000 6.32 0.00 36.17 5.28
2707 3132 0.879090 CTTTAACAAGCCACCGGGTC 59.121 55.000 6.32 0.00 36.17 4.46
2708 3133 0.885596 TTTAACAAGCCACCGGGTCG 60.886 55.000 6.32 0.00 36.17 4.79
2709 3134 1.756408 TTAACAAGCCACCGGGTCGA 61.756 55.000 6.32 0.00 36.17 4.20
2710 3135 1.756408 TAACAAGCCACCGGGTCGAA 61.756 55.000 6.32 0.00 36.17 3.71
2711 3136 2.046314 CAAGCCACCGGGTCGAAT 60.046 61.111 6.32 0.00 36.17 3.34
2712 3137 2.106683 CAAGCCACCGGGTCGAATC 61.107 63.158 6.32 0.00 36.17 2.52
2713 3138 2.589157 AAGCCACCGGGTCGAATCA 61.589 57.895 6.32 0.00 36.17 2.57
2714 3139 1.910580 AAGCCACCGGGTCGAATCAT 61.911 55.000 6.32 0.00 36.17 2.45
2715 3140 1.887707 GCCACCGGGTCGAATCATC 60.888 63.158 6.32 0.00 36.17 2.92
2724 3149 4.540153 CGAATCATCGGCTGGGTT 57.460 55.556 0.00 0.00 45.32 4.11
2725 3150 3.678921 CGAATCATCGGCTGGGTTA 57.321 52.632 0.00 0.00 45.32 2.85
2726 3151 1.217882 CGAATCATCGGCTGGGTTAC 58.782 55.000 0.00 0.00 45.32 2.50
2727 3152 1.202533 CGAATCATCGGCTGGGTTACT 60.203 52.381 0.00 0.00 45.32 2.24
2728 3153 2.484889 GAATCATCGGCTGGGTTACTC 58.515 52.381 0.00 0.00 0.00 2.59
2729 3154 0.759346 ATCATCGGCTGGGTTACTCC 59.241 55.000 0.00 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 8.496707 ACAAAAGATTTCATGCAAGTTCTTTT 57.503 26.923 16.58 16.58 38.03 2.27
101 102 8.855110 TGTTAATGCTTTGTTCCAATTCTCTAA 58.145 29.630 0.00 0.00 0.00 2.10
203 204 8.687292 AGTCACCTATTACGTGTTATGATCTA 57.313 34.615 0.00 0.00 32.86 1.98
219 220 7.148641 CGATCTTGCAAGTTATAGTCACCTAT 58.851 38.462 25.19 7.21 37.62 2.57
455 456 3.181478 CCTACCGTGAGTGAGTAATTCCC 60.181 52.174 0.00 0.00 0.00 3.97
470 471 0.398522 TCCATGATGCTCCCTACCGT 60.399 55.000 0.00 0.00 0.00 4.83
651 657 8.340443 CCTAAAACCAACGCTATAAAATCCTAC 58.660 37.037 0.00 0.00 0.00 3.18
952 960 8.754230 ACGTATCTACTTTTCCTAACACTTTC 57.246 34.615 0.00 0.00 0.00 2.62
1020 1028 0.107165 AATAACGCTGGGAGAAGGCC 60.107 55.000 0.00 0.00 0.00 5.19
1021 1029 1.134371 AGAATAACGCTGGGAGAAGGC 60.134 52.381 0.00 0.00 0.00 4.35
1022 1030 2.990066 AGAATAACGCTGGGAGAAGG 57.010 50.000 0.00 0.00 0.00 3.46
1023 1031 2.860735 CGAAGAATAACGCTGGGAGAAG 59.139 50.000 0.00 0.00 0.00 2.85
1024 1032 2.418197 CCGAAGAATAACGCTGGGAGAA 60.418 50.000 0.00 0.00 0.00 2.87
1025 1033 1.136305 CCGAAGAATAACGCTGGGAGA 59.864 52.381 0.00 0.00 0.00 3.71
1026 1034 1.571919 CCGAAGAATAACGCTGGGAG 58.428 55.000 0.00 0.00 0.00 4.30
1027 1035 0.177141 CCCGAAGAATAACGCTGGGA 59.823 55.000 0.00 0.00 37.35 4.37
1028 1036 0.177141 TCCCGAAGAATAACGCTGGG 59.823 55.000 0.00 0.00 36.48 4.45
1029 1037 1.287425 GTCCCGAAGAATAACGCTGG 58.713 55.000 0.00 0.00 0.00 4.85
1030 1038 1.134788 AGGTCCCGAAGAATAACGCTG 60.135 52.381 0.00 0.00 0.00 5.18
1031 1039 1.192428 AGGTCCCGAAGAATAACGCT 58.808 50.000 0.00 0.00 0.00 5.07
1032 1040 2.019948 AAGGTCCCGAAGAATAACGC 57.980 50.000 0.00 0.00 0.00 4.84
1033 1041 3.370061 GTGAAAGGTCCCGAAGAATAACG 59.630 47.826 0.00 0.00 0.00 3.18
1034 1042 3.370061 CGTGAAAGGTCCCGAAGAATAAC 59.630 47.826 0.00 0.00 0.00 1.89
1035 1043 3.592059 CGTGAAAGGTCCCGAAGAATAA 58.408 45.455 0.00 0.00 0.00 1.40
1036 1044 2.093869 CCGTGAAAGGTCCCGAAGAATA 60.094 50.000 0.00 0.00 0.00 1.75
1037 1045 1.338769 CCGTGAAAGGTCCCGAAGAAT 60.339 52.381 0.00 0.00 0.00 2.40
1038 1046 0.034337 CCGTGAAAGGTCCCGAAGAA 59.966 55.000 0.00 0.00 0.00 2.52
1039 1047 0.828762 TCCGTGAAAGGTCCCGAAGA 60.829 55.000 0.00 0.00 0.00 2.87
1040 1048 0.669625 GTCCGTGAAAGGTCCCGAAG 60.670 60.000 0.00 0.00 0.00 3.79
1041 1049 1.368579 GTCCGTGAAAGGTCCCGAA 59.631 57.895 0.00 0.00 0.00 4.30
1042 1050 2.576832 GGTCCGTGAAAGGTCCCGA 61.577 63.158 0.00 0.00 34.10 5.14
1043 1051 2.047560 GGTCCGTGAAAGGTCCCG 60.048 66.667 0.00 0.00 34.10 5.14
1044 1052 0.605589 CAAGGTCCGTGAAAGGTCCC 60.606 60.000 0.00 0.00 39.80 4.46
1045 1053 0.395312 TCAAGGTCCGTGAAAGGTCC 59.605 55.000 4.87 0.00 39.35 4.46
1046 1054 2.249844 TTCAAGGTCCGTGAAAGGTC 57.750 50.000 16.77 0.00 32.13 3.85
1047 1055 2.092592 AGTTTCAAGGTCCGTGAAAGGT 60.093 45.455 27.06 17.36 43.68 3.50
1048 1056 2.548480 GAGTTTCAAGGTCCGTGAAAGG 59.452 50.000 27.06 0.00 43.68 3.11
1049 1057 3.202906 TGAGTTTCAAGGTCCGTGAAAG 58.797 45.455 27.06 0.00 43.68 2.62
1050 1058 3.202906 CTGAGTTTCAAGGTCCGTGAAA 58.797 45.455 23.96 23.96 41.50 2.69
1051 1059 2.484770 CCTGAGTTTCAAGGTCCGTGAA 60.485 50.000 15.36 15.36 33.21 3.18
1052 1060 1.070134 CCTGAGTTTCAAGGTCCGTGA 59.930 52.381 3.03 3.03 0.00 4.35
1053 1061 1.512926 CCTGAGTTTCAAGGTCCGTG 58.487 55.000 0.00 0.00 0.00 4.94
1054 1062 0.250338 GCCTGAGTTTCAAGGTCCGT 60.250 55.000 0.00 0.00 0.00 4.69
1055 1063 0.035458 AGCCTGAGTTTCAAGGTCCG 59.965 55.000 0.00 0.00 0.00 4.79
1068 1076 0.473694 TTCCAGGGAGAACAGCCTGA 60.474 55.000 0.00 0.00 30.49 3.86
1071 1079 1.004745 TCAATTCCAGGGAGAACAGCC 59.995 52.381 0.00 0.00 0.00 4.85
1108 1116 8.313944 TCTACAACATTTAGGCCTATCTTGTA 57.686 34.615 14.74 18.56 0.00 2.41
1154 1162 4.954202 TGTCACGAGGTATCCTAACTGAAT 59.046 41.667 0.00 0.00 31.76 2.57
1170 1178 1.537348 CGGTTCAGAAGGTTGTCACGA 60.537 52.381 0.00 0.00 0.00 4.35
1223 1231 1.568504 AATCGTGGGGAGACTGCTTA 58.431 50.000 0.00 0.00 0.00 3.09
1266 1274 2.672996 CCCCCAACAAGCTCACCG 60.673 66.667 0.00 0.00 0.00 4.94
1290 1300 5.186256 TCCCACAAAACTATATGCAAGGA 57.814 39.130 0.00 0.00 0.00 3.36
1291 1301 4.949856 ACTCCCACAAAACTATATGCAAGG 59.050 41.667 0.00 0.00 0.00 3.61
1305 1315 3.211045 GCAACTTTGAGTACTCCCACAA 58.789 45.455 20.11 5.55 0.00 3.33
1330 1340 6.382869 AAAGCATATCTAACAGCAATGGTC 57.617 37.500 0.00 0.00 0.00 4.02
1374 1384 6.017192 ACACTGATTTCAGACTCCTTAGGTA 58.983 40.000 14.29 0.00 46.59 3.08
1385 1395 6.115446 GGTAATCCATCACACTGATTTCAGA 58.885 40.000 14.29 0.00 46.59 3.27
1400 1410 2.575532 CTGGTGCGATTGGTAATCCAT 58.424 47.619 0.00 0.00 43.91 3.41
1466 1476 5.538813 ACATATCTACCAAATACGCTCTGGA 59.461 40.000 0.88 0.00 34.16 3.86
1530 1540 6.060136 CCAGATGAAAGTACATGGACATCAT 58.940 40.000 22.48 22.48 37.27 2.45
1595 1605 0.436150 CACGATTCTCGGCATATGCG 59.564 55.000 21.04 15.85 45.59 4.73
1620 1630 2.487746 TACAGCAGGATACCCATGGA 57.512 50.000 15.22 0.00 33.88 3.41
1631 1641 4.021192 ACCACCAAAATGATTTACAGCAGG 60.021 41.667 0.00 0.00 0.00 4.85
1644 1654 3.843422 TCATTCCACAGACCACCAAAAT 58.157 40.909 0.00 0.00 0.00 1.82
1701 1711 0.950555 CAACCTGCTGCAGCGAACTA 60.951 55.000 32.11 14.66 45.83 2.24
1803 2144 0.321671 GCTGAGACAAGTAGGTGCCA 59.678 55.000 0.00 0.00 0.00 4.92
1829 2170 2.026822 CCTTCCCACTGAGCAGTAACAT 60.027 50.000 2.36 0.00 40.20 2.71
1841 2182 2.131023 GATGATCTTCCCCTTCCCACT 58.869 52.381 0.00 0.00 0.00 4.00
1888 2229 5.812642 GTCAAGATGTTCGGTATCTGAATGT 59.187 40.000 0.00 0.00 35.20 2.71
1909 2332 5.853936 AGCAACAACACTATGAAGTAGTCA 58.146 37.500 0.00 0.00 41.73 3.41
1917 2340 4.065088 GGAGTCAAGCAACAACACTATGA 58.935 43.478 0.00 0.00 0.00 2.15
1933 2356 0.750249 TTCACGTGCTTCTGGAGTCA 59.250 50.000 11.67 0.00 0.00 3.41
1948 2371 2.033424 GCCAAAACCTGAGTGTCTTCAC 59.967 50.000 0.00 0.00 44.15 3.18
1969 2394 3.168193 GTTTAAACATCCGTTCCATGCG 58.832 45.455 13.51 0.00 32.91 4.73
1979 2404 4.437390 CGTGAGCAGATGGTTTAAACATCC 60.437 45.833 18.18 5.39 44.45 3.51
2017 2442 5.437289 TTGCGAAAATGTCAGACTCAATT 57.563 34.783 1.31 0.00 0.00 2.32
2028 2453 6.072175 TGCTTCTATAAACCTTGCGAAAATGT 60.072 34.615 0.00 0.00 0.00 2.71
2032 2457 5.001232 ACTGCTTCTATAAACCTTGCGAAA 58.999 37.500 0.00 0.00 0.00 3.46
2033 2458 4.391830 CACTGCTTCTATAAACCTTGCGAA 59.608 41.667 0.00 0.00 0.00 4.70
2063 2488 8.970691 ATGTCATTTTTATAGTGAACACTTGC 57.029 30.769 12.66 1.91 42.54 4.01
2077 2502 9.040939 CGTACCTGTGATATGATGTCATTTTTA 57.959 33.333 0.19 0.00 37.76 1.52
2078 2503 7.012327 CCGTACCTGTGATATGATGTCATTTTT 59.988 37.037 0.19 0.00 37.76 1.94
2079 2504 6.483307 CCGTACCTGTGATATGATGTCATTTT 59.517 38.462 0.19 0.00 37.76 1.82
2080 2505 5.991606 CCGTACCTGTGATATGATGTCATTT 59.008 40.000 0.19 0.00 37.76 2.32
2081 2506 5.304357 TCCGTACCTGTGATATGATGTCATT 59.696 40.000 0.19 0.00 37.76 2.57
2082 2507 4.832823 TCCGTACCTGTGATATGATGTCAT 59.167 41.667 0.00 0.68 40.22 3.06
2083 2508 4.211920 TCCGTACCTGTGATATGATGTCA 58.788 43.478 0.00 0.00 0.00 3.58
2084 2509 4.799678 CTCCGTACCTGTGATATGATGTC 58.200 47.826 0.00 0.00 0.00 3.06
2085 2510 3.005897 GCTCCGTACCTGTGATATGATGT 59.994 47.826 0.00 0.00 0.00 3.06
2086 2511 3.579709 GCTCCGTACCTGTGATATGATG 58.420 50.000 0.00 0.00 0.00 3.07
2087 2512 2.229062 CGCTCCGTACCTGTGATATGAT 59.771 50.000 0.00 0.00 0.00 2.45
2088 2513 1.607148 CGCTCCGTACCTGTGATATGA 59.393 52.381 0.00 0.00 0.00 2.15
2089 2514 1.930817 GCGCTCCGTACCTGTGATATG 60.931 57.143 0.00 0.00 0.00 1.78
2090 2515 0.314302 GCGCTCCGTACCTGTGATAT 59.686 55.000 0.00 0.00 0.00 1.63
2091 2516 1.731433 GGCGCTCCGTACCTGTGATA 61.731 60.000 7.64 0.00 0.00 2.15
2092 2517 2.494918 GCGCTCCGTACCTGTGAT 59.505 61.111 0.00 0.00 0.00 3.06
2093 2518 3.755628 GGCGCTCCGTACCTGTGA 61.756 66.667 7.64 0.00 0.00 3.58
2094 2519 4.814294 GGGCGCTCCGTACCTGTG 62.814 72.222 7.64 0.00 0.00 3.66
2096 2521 4.814294 GTGGGCGCTCCGTACCTG 62.814 72.222 3.94 0.00 38.76 4.00
2098 2523 4.814294 CTGTGGGCGCTCCGTACC 62.814 72.222 3.94 0.00 38.76 3.34
2107 2532 2.360350 AAGATGGTGCTGTGGGCG 60.360 61.111 0.00 0.00 45.43 6.13
2108 2533 2.998279 GCAAGATGGTGCTGTGGGC 61.998 63.158 0.00 0.00 41.51 5.36
2109 2534 2.693762 CGCAAGATGGTGCTGTGGG 61.694 63.158 0.00 0.00 42.62 4.61
2110 2535 1.672030 TCGCAAGATGGTGCTGTGG 60.672 57.895 0.00 0.00 45.01 4.17
2111 2536 3.970721 TCGCAAGATGGTGCTGTG 58.029 55.556 0.00 0.00 45.01 3.66
2125 2550 0.917259 CACGAACAGATGCTAGTCGC 59.083 55.000 0.00 0.00 39.77 5.19
2126 2551 0.917259 GCACGAACAGATGCTAGTCG 59.083 55.000 0.00 0.00 38.84 4.18
2127 2552 1.281899 GGCACGAACAGATGCTAGTC 58.718 55.000 0.00 0.00 41.74 2.59
2128 2553 0.608130 TGGCACGAACAGATGCTAGT 59.392 50.000 0.00 0.00 41.74 2.57
2129 2554 1.002366 GTGGCACGAACAGATGCTAG 58.998 55.000 0.00 0.00 41.74 3.42
2130 2555 0.735978 CGTGGCACGAACAGATGCTA 60.736 55.000 34.85 0.00 46.05 3.49
2131 2556 2.029288 CGTGGCACGAACAGATGCT 61.029 57.895 34.85 0.00 46.05 3.79
2132 2557 2.476051 CGTGGCACGAACAGATGC 59.524 61.111 34.85 0.00 46.05 3.91
2133 2558 2.476051 GCGTGGCACGAACAGATG 59.524 61.111 40.94 12.28 46.05 2.90
2134 2559 3.112075 CGCGTGGCACGAACAGAT 61.112 61.111 40.94 0.00 46.05 2.90
2137 2562 4.673298 ATCCGCGTGGCACGAACA 62.673 61.111 40.94 23.61 46.05 3.18
2138 2563 4.147322 CATCCGCGTGGCACGAAC 62.147 66.667 40.94 23.95 46.05 3.95
2143 2568 4.321966 TTGTCCATCCGCGTGGCA 62.322 61.111 11.05 9.28 39.19 4.92
2144 2569 3.499737 CTTGTCCATCCGCGTGGC 61.500 66.667 11.05 6.98 39.19 5.01
2145 2570 2.047274 ACTTGTCCATCCGCGTGG 60.047 61.111 9.28 9.28 40.76 4.94
2146 2571 3.027170 GCACTTGTCCATCCGCGTG 62.027 63.158 4.92 0.00 0.00 5.34
2147 2572 2.742372 GCACTTGTCCATCCGCGT 60.742 61.111 4.92 0.00 0.00 6.01
2148 2573 3.853330 CGCACTTGTCCATCCGCG 61.853 66.667 0.00 0.00 36.47 6.46
2149 2574 1.017177 TTACGCACTTGTCCATCCGC 61.017 55.000 0.00 0.00 0.00 5.54
2150 2575 0.999406 CTTACGCACTTGTCCATCCG 59.001 55.000 0.00 0.00 0.00 4.18
2151 2576 0.727398 GCTTACGCACTTGTCCATCC 59.273 55.000 0.00 0.00 35.78 3.51
2152 2577 0.727398 GGCTTACGCACTTGTCCATC 59.273 55.000 0.00 0.00 38.10 3.51
2153 2578 1.019278 CGGCTTACGCACTTGTCCAT 61.019 55.000 0.00 0.00 38.10 3.41
2154 2579 1.666553 CGGCTTACGCACTTGTCCA 60.667 57.895 0.00 0.00 38.10 4.02
2155 2580 2.388232 CCGGCTTACGCACTTGTCC 61.388 63.158 0.00 0.00 42.52 4.02
2156 2581 3.023591 GCCGGCTTACGCACTTGTC 62.024 63.158 22.15 0.00 42.52 3.18
2157 2582 3.047877 GCCGGCTTACGCACTTGT 61.048 61.111 22.15 0.00 42.52 3.16
2158 2583 4.147322 CGCCGGCTTACGCACTTG 62.147 66.667 26.68 0.00 42.52 3.16
2177 2602 2.496470 GTTGTAGACTAGACTGTGGGGG 59.504 54.545 4.90 0.00 0.00 5.40
2178 2603 2.163815 CGTTGTAGACTAGACTGTGGGG 59.836 54.545 4.90 0.00 0.00 4.96
2179 2604 3.079578 TCGTTGTAGACTAGACTGTGGG 58.920 50.000 4.90 0.00 0.00 4.61
2180 2605 4.761235 TTCGTTGTAGACTAGACTGTGG 57.239 45.455 4.90 0.00 0.00 4.17
2181 2606 4.916249 GGTTTCGTTGTAGACTAGACTGTG 59.084 45.833 4.90 0.00 0.00 3.66
2182 2607 4.022503 GGGTTTCGTTGTAGACTAGACTGT 60.023 45.833 4.90 0.00 0.00 3.55
2183 2608 4.483311 GGGTTTCGTTGTAGACTAGACTG 58.517 47.826 4.90 0.00 0.00 3.51
2184 2609 3.190118 CGGGTTTCGTTGTAGACTAGACT 59.810 47.826 0.00 0.00 0.00 3.24
2185 2610 3.496155 CGGGTTTCGTTGTAGACTAGAC 58.504 50.000 0.00 0.00 0.00 2.59
2186 2611 2.489329 CCGGGTTTCGTTGTAGACTAGA 59.511 50.000 0.00 0.00 37.11 2.43
2187 2612 2.489329 TCCGGGTTTCGTTGTAGACTAG 59.511 50.000 0.00 0.00 37.11 2.57
2188 2613 2.489329 CTCCGGGTTTCGTTGTAGACTA 59.511 50.000 0.00 0.00 37.11 2.59
2189 2614 1.271656 CTCCGGGTTTCGTTGTAGACT 59.728 52.381 0.00 0.00 37.11 3.24
2190 2615 1.270550 TCTCCGGGTTTCGTTGTAGAC 59.729 52.381 0.00 0.00 37.11 2.59
2191 2616 1.270550 GTCTCCGGGTTTCGTTGTAGA 59.729 52.381 0.00 0.00 37.11 2.59
2192 2617 1.670967 GGTCTCCGGGTTTCGTTGTAG 60.671 57.143 0.00 0.00 37.11 2.74
2193 2618 0.318120 GGTCTCCGGGTTTCGTTGTA 59.682 55.000 0.00 0.00 37.11 2.41
2194 2619 1.070275 GGTCTCCGGGTTTCGTTGT 59.930 57.895 0.00 0.00 37.11 3.32
2195 2620 2.025418 CGGTCTCCGGGTTTCGTTG 61.025 63.158 0.00 0.00 44.15 4.10
2196 2621 2.341176 CGGTCTCCGGGTTTCGTT 59.659 61.111 0.00 0.00 44.15 3.85
2211 2636 2.503375 GACGCGACACTGGTACGG 60.503 66.667 15.93 0.00 42.99 4.02
2212 2637 1.796355 CAGACGCGACACTGGTACG 60.796 63.158 15.93 0.00 34.02 3.67
2213 2638 2.087009 GCAGACGCGACACTGGTAC 61.087 63.158 15.93 3.40 35.05 3.34
2214 2639 2.196382 GAGCAGACGCGACACTGGTA 62.196 60.000 25.80 0.00 43.34 3.25
2215 2640 3.559657 GAGCAGACGCGACACTGGT 62.560 63.158 25.95 25.95 45.42 4.00
2216 2641 2.807045 GAGCAGACGCGACACTGG 60.807 66.667 15.93 0.00 45.49 4.00
2217 2642 3.168604 CGAGCAGACGCGACACTG 61.169 66.667 15.93 19.34 45.49 3.66
2231 2656 3.458163 TTGGGTAGCTCGGGCGAG 61.458 66.667 0.00 0.00 44.37 5.03
2232 2657 3.766691 GTTGGGTAGCTCGGGCGA 61.767 66.667 0.00 0.00 44.37 5.54
2233 2658 4.077184 TGTTGGGTAGCTCGGGCG 62.077 66.667 0.00 0.00 44.37 6.13
2234 2659 1.972660 ATCTGTTGGGTAGCTCGGGC 61.973 60.000 0.00 0.00 39.06 6.13
2235 2660 0.179073 CATCTGTTGGGTAGCTCGGG 60.179 60.000 0.00 0.00 0.00 5.14
2236 2661 0.811616 GCATCTGTTGGGTAGCTCGG 60.812 60.000 0.00 0.00 0.00 4.63
2237 2662 1.148157 CGCATCTGTTGGGTAGCTCG 61.148 60.000 0.00 0.00 33.74 5.03
2238 2663 1.432270 GCGCATCTGTTGGGTAGCTC 61.432 60.000 0.30 0.00 40.30 4.09
2239 2664 1.450312 GCGCATCTGTTGGGTAGCT 60.450 57.895 0.30 0.00 40.30 3.32
2240 2665 2.813179 CGCGCATCTGTTGGGTAGC 61.813 63.158 8.75 0.00 40.30 3.58
2241 2666 2.813179 GCGCGCATCTGTTGGGTAG 61.813 63.158 29.10 0.00 40.30 3.18
2242 2667 2.817834 GCGCGCATCTGTTGGGTA 60.818 61.111 29.10 0.00 40.30 3.69
2244 2669 3.672255 CTTGCGCGCATCTGTTGGG 62.672 63.158 36.83 13.15 41.08 4.12
2245 2670 2.202388 CTTGCGCGCATCTGTTGG 60.202 61.111 36.83 14.54 0.00 3.77
2246 2671 2.872925 GCTTGCGCGCATCTGTTG 60.873 61.111 36.83 20.15 0.00 3.33
2247 2672 4.107051 GGCTTGCGCGCATCTGTT 62.107 61.111 36.83 0.00 36.88 3.16
2268 2693 0.470341 GAAGACCAGACCATAGGGGC 59.530 60.000 0.00 0.00 45.66 5.80
2269 2694 1.486726 GTGAAGACCAGACCATAGGGG 59.513 57.143 0.00 0.00 44.81 4.79
2270 2695 1.486726 GGTGAAGACCAGACCATAGGG 59.513 57.143 0.00 0.00 42.59 3.53
2271 2696 2.990066 GGTGAAGACCAGACCATAGG 57.010 55.000 0.00 0.00 42.59 2.57
2281 2706 1.782028 GCGGTGTGTTGGTGAAGACC 61.782 60.000 0.00 0.00 43.48 3.85
2282 2707 1.647084 GCGGTGTGTTGGTGAAGAC 59.353 57.895 0.00 0.00 0.00 3.01
2283 2708 1.885388 CGCGGTGTGTTGGTGAAGA 60.885 57.895 0.00 0.00 0.00 2.87
2284 2709 2.101209 GACGCGGTGTGTTGGTGAAG 62.101 60.000 12.47 0.00 0.00 3.02
2285 2710 2.125065 ACGCGGTGTGTTGGTGAA 60.125 55.556 12.47 0.00 0.00 3.18
2286 2711 2.586635 GACGCGGTGTGTTGGTGA 60.587 61.111 12.47 0.00 0.00 4.02
2287 2712 3.995669 CGACGCGGTGTGTTGGTG 61.996 66.667 12.47 0.00 0.00 4.17
2299 2724 2.799916 GACGTGTGACTCCGACGC 60.800 66.667 0.00 0.00 36.56 5.19
2300 2725 2.126965 GGACGTGTGACTCCGACG 60.127 66.667 0.00 0.00 39.03 5.12
2304 2729 2.733593 GTGCGGACGTGTGACTCC 60.734 66.667 0.00 0.00 0.00 3.85
2305 2730 2.733593 GGTGCGGACGTGTGACTC 60.734 66.667 0.00 0.00 0.00 3.36
2306 2731 4.640855 CGGTGCGGACGTGTGACT 62.641 66.667 0.00 0.00 0.00 3.41
2317 2742 2.127534 GCGTTGTAAACCGGTGCG 60.128 61.111 8.52 7.70 46.28 5.34
2318 2743 2.253154 GGCGTTGTAAACCGGTGC 59.747 61.111 8.52 4.77 46.28 5.01
2319 2744 2.552268 CGGCGTTGTAAACCGGTG 59.448 61.111 8.52 0.00 46.28 4.94
2323 2748 1.369568 GCACACGGCGTTGTAAACC 60.370 57.895 11.19 0.00 46.28 3.27
2324 2749 4.199130 GCACACGGCGTTGTAAAC 57.801 55.556 11.19 2.15 45.31 2.01
2333 2758 4.077188 GCTCGAGTTGCACACGGC 62.077 66.667 15.13 0.00 45.13 5.68
2334 2759 3.767230 CGCTCGAGTTGCACACGG 61.767 66.667 15.13 0.00 33.10 4.94
2335 2760 2.988549 GACGCTCGAGTTGCACACG 61.989 63.158 15.13 9.46 33.54 4.49
2336 2761 2.658707 GGACGCTCGAGTTGCACAC 61.659 63.158 15.13 0.00 0.00 3.82
2337 2762 2.355837 GGACGCTCGAGTTGCACA 60.356 61.111 15.13 0.00 0.00 4.57
2338 2763 2.355837 TGGACGCTCGAGTTGCAC 60.356 61.111 15.13 4.61 0.00 4.57
2339 2764 2.355837 GTGGACGCTCGAGTTGCA 60.356 61.111 15.13 10.16 0.00 4.08
2340 2765 3.470567 CGTGGACGCTCGAGTTGC 61.471 66.667 15.13 7.49 0.00 4.17
2350 2775 1.666553 TTGTAAGCTGGCGTGGACG 60.667 57.895 0.00 0.00 43.27 4.79
2351 2776 1.866925 GTTGTAAGCTGGCGTGGAC 59.133 57.895 0.00 0.00 0.00 4.02
2352 2777 1.666553 CGTTGTAAGCTGGCGTGGA 60.667 57.895 0.00 0.00 0.00 4.02
2353 2778 2.860293 CGTTGTAAGCTGGCGTGG 59.140 61.111 0.00 0.00 0.00 4.94
2354 2779 2.173382 GCGTTGTAAGCTGGCGTG 59.827 61.111 0.00 0.00 0.00 5.34
2355 2780 3.047877 GGCGTTGTAAGCTGGCGT 61.048 61.111 0.00 0.00 34.52 5.68
2356 2781 4.147322 CGGCGTTGTAAGCTGGCG 62.147 66.667 0.00 1.15 43.79 5.69
2357 2782 4.460873 GCGGCGTTGTAAGCTGGC 62.461 66.667 9.37 0.00 41.08 4.85
2358 2783 4.147322 CGCGGCGTTGTAAGCTGG 62.147 66.667 15.36 0.00 41.08 4.85
2359 2784 4.147322 CCGCGGCGTTGTAAGCTG 62.147 66.667 22.00 0.00 43.46 4.24
2360 2785 4.675029 ACCGCGGCGTTGTAAGCT 62.675 61.111 28.58 0.00 34.52 3.74
2361 2786 4.143363 GACCGCGGCGTTGTAAGC 62.143 66.667 28.58 0.00 0.00 3.09
2362 2787 3.834373 CGACCGCGGCGTTGTAAG 61.834 66.667 28.58 7.08 0.00 2.34
2363 2788 4.340019 TCGACCGCGGCGTTGTAA 62.340 61.111 30.84 15.86 38.28 2.41
2371 2796 2.938539 GATGGAAGAGTCGACCGCGG 62.939 65.000 26.86 26.86 38.28 6.46
2372 2797 1.586564 GATGGAAGAGTCGACCGCG 60.587 63.158 13.01 0.00 39.35 6.46
2373 2798 1.227002 GGATGGAAGAGTCGACCGC 60.227 63.158 13.01 4.79 0.00 5.68
2374 2799 0.747255 ATGGATGGAAGAGTCGACCG 59.253 55.000 13.01 0.00 0.00 4.79
2375 2800 1.808133 GCATGGATGGAAGAGTCGACC 60.808 57.143 13.01 3.77 0.00 4.79
2376 2801 1.134699 TGCATGGATGGAAGAGTCGAC 60.135 52.381 7.70 7.70 0.00 4.20
2377 2802 1.137675 CTGCATGGATGGAAGAGTCGA 59.862 52.381 0.00 0.00 0.00 4.20
2378 2803 1.134580 ACTGCATGGATGGAAGAGTCG 60.135 52.381 0.00 0.00 0.00 4.18
2379 2804 2.170187 AGACTGCATGGATGGAAGAGTC 59.830 50.000 0.00 0.00 0.00 3.36
2380 2805 2.194859 AGACTGCATGGATGGAAGAGT 58.805 47.619 0.00 0.00 0.00 3.24
2381 2806 3.278668 AAGACTGCATGGATGGAAGAG 57.721 47.619 0.00 0.00 0.00 2.85
2382 2807 3.519107 TGTAAGACTGCATGGATGGAAGA 59.481 43.478 0.00 0.00 0.00 2.87
2383 2808 3.877559 TGTAAGACTGCATGGATGGAAG 58.122 45.455 0.00 0.00 0.00 3.46
2384 2809 3.998913 TGTAAGACTGCATGGATGGAA 57.001 42.857 0.00 0.00 0.00 3.53
2385 2810 3.008923 TGTTGTAAGACTGCATGGATGGA 59.991 43.478 0.00 0.00 0.00 3.41
2386 2811 3.346315 TGTTGTAAGACTGCATGGATGG 58.654 45.455 0.00 0.00 0.00 3.51
2387 2812 5.337554 CAATGTTGTAAGACTGCATGGATG 58.662 41.667 0.00 0.00 0.00 3.51
2388 2813 4.142315 GCAATGTTGTAAGACTGCATGGAT 60.142 41.667 0.00 0.00 0.00 3.41
2389 2814 3.191162 GCAATGTTGTAAGACTGCATGGA 59.809 43.478 0.00 0.00 0.00 3.41
2390 2815 3.504863 GCAATGTTGTAAGACTGCATGG 58.495 45.455 0.00 0.00 0.00 3.66
2391 2816 3.165890 CGCAATGTTGTAAGACTGCATG 58.834 45.455 0.00 0.00 0.00 4.06
2392 2817 2.162208 CCGCAATGTTGTAAGACTGCAT 59.838 45.455 0.00 0.00 0.00 3.96
2393 2818 1.535028 CCGCAATGTTGTAAGACTGCA 59.465 47.619 0.00 0.00 0.00 4.41
2394 2819 1.535462 ACCGCAATGTTGTAAGACTGC 59.465 47.619 0.00 0.00 0.00 4.40
2395 2820 2.159841 CGACCGCAATGTTGTAAGACTG 60.160 50.000 0.00 0.00 0.00 3.51
2396 2821 2.066262 CGACCGCAATGTTGTAAGACT 58.934 47.619 0.00 0.00 0.00 3.24
2397 2822 2.063266 TCGACCGCAATGTTGTAAGAC 58.937 47.619 0.00 0.00 0.00 3.01
2398 2823 2.063266 GTCGACCGCAATGTTGTAAGA 58.937 47.619 3.51 0.00 0.00 2.10
2399 2824 2.066262 AGTCGACCGCAATGTTGTAAG 58.934 47.619 13.01 0.00 0.00 2.34
2400 2825 1.795872 CAGTCGACCGCAATGTTGTAA 59.204 47.619 13.01 0.00 0.00 2.41
2401 2826 1.269883 ACAGTCGACCGCAATGTTGTA 60.270 47.619 13.01 0.00 0.00 2.41
2402 2827 0.531974 ACAGTCGACCGCAATGTTGT 60.532 50.000 13.01 4.36 0.00 3.32
2403 2828 0.163788 GACAGTCGACCGCAATGTTG 59.836 55.000 13.01 3.65 0.00 3.33
2404 2829 0.033504 AGACAGTCGACCGCAATGTT 59.966 50.000 13.01 0.00 0.00 2.71
2405 2830 0.388649 GAGACAGTCGACCGCAATGT 60.389 55.000 13.01 9.67 0.00 2.71
2406 2831 0.388520 TGAGACAGTCGACCGCAATG 60.389 55.000 13.01 6.04 0.00 2.82
2407 2832 0.532573 ATGAGACAGTCGACCGCAAT 59.467 50.000 13.01 0.00 0.00 3.56
2408 2833 0.317160 AATGAGACAGTCGACCGCAA 59.683 50.000 13.01 0.00 0.00 4.85
2409 2834 0.109272 GAATGAGACAGTCGACCGCA 60.109 55.000 13.01 5.53 0.00 5.69
2410 2835 0.109272 TGAATGAGACAGTCGACCGC 60.109 55.000 13.01 1.54 30.57 5.68
2411 2836 1.618861 GTGAATGAGACAGTCGACCG 58.381 55.000 13.01 4.15 30.57 4.79
2412 2837 1.618861 CGTGAATGAGACAGTCGACC 58.381 55.000 13.01 0.00 30.57 4.79
2413 2838 0.985549 GCGTGAATGAGACAGTCGAC 59.014 55.000 7.70 7.70 30.57 4.20
2414 2839 0.109272 GGCGTGAATGAGACAGTCGA 60.109 55.000 0.00 0.00 30.57 4.20
2415 2840 1.406219 CGGCGTGAATGAGACAGTCG 61.406 60.000 0.00 0.00 30.57 4.18
2416 2841 1.078759 CCGGCGTGAATGAGACAGTC 61.079 60.000 6.01 0.00 0.00 3.51
2417 2842 1.079819 CCGGCGTGAATGAGACAGT 60.080 57.895 6.01 0.00 0.00 3.55
2418 2843 2.456119 GCCGGCGTGAATGAGACAG 61.456 63.158 12.58 0.00 0.00 3.51
2419 2844 2.434185 GCCGGCGTGAATGAGACA 60.434 61.111 12.58 0.00 0.00 3.41
2420 2845 0.529773 TATGCCGGCGTGAATGAGAC 60.530 55.000 31.45 0.00 0.00 3.36
2421 2846 0.529773 GTATGCCGGCGTGAATGAGA 60.530 55.000 31.45 6.12 0.00 3.27
2422 2847 0.809636 TGTATGCCGGCGTGAATGAG 60.810 55.000 31.45 0.00 0.00 2.90
2423 2848 0.391793 TTGTATGCCGGCGTGAATGA 60.392 50.000 31.45 7.82 0.00 2.57
2424 2849 0.449786 TTTGTATGCCGGCGTGAATG 59.550 50.000 31.45 0.00 0.00 2.67
2425 2850 0.732571 CTTTGTATGCCGGCGTGAAT 59.267 50.000 31.45 16.79 0.00 2.57
2426 2851 1.917782 GCTTTGTATGCCGGCGTGAA 61.918 55.000 31.45 19.78 0.00 3.18
2427 2852 2.395360 GCTTTGTATGCCGGCGTGA 61.395 57.895 31.45 14.71 0.00 4.35
2428 2853 2.100216 GCTTTGTATGCCGGCGTG 59.900 61.111 31.45 14.94 0.00 5.34
2429 2854 3.131478 GGCTTTGTATGCCGGCGT 61.131 61.111 27.04 27.04 41.03 5.68
2434 2859 2.102946 GCTGCGGCTTTGTATGCC 59.897 61.111 11.21 0.00 46.42 4.40
2447 2872 3.474034 GACGCGTGAGTCAGCTGC 61.474 66.667 20.70 4.26 40.65 5.25
2448 2873 2.807045 GGACGCGTGAGTCAGCTG 60.807 66.667 20.70 7.63 42.62 4.24
2449 2874 4.406173 CGGACGCGTGAGTCAGCT 62.406 66.667 20.70 0.00 42.62 4.24
2462 2887 3.039588 TTCGAAGTTGGCGCGGAC 61.040 61.111 8.83 1.89 0.00 4.79
2463 2888 3.039588 GTTCGAAGTTGGCGCGGA 61.040 61.111 8.83 0.00 0.00 5.54
2464 2889 2.563086 GATGTTCGAAGTTGGCGCGG 62.563 60.000 8.83 0.00 0.00 6.46
2465 2890 1.225745 GATGTTCGAAGTTGGCGCG 60.226 57.895 0.00 0.00 0.00 6.86
2466 2891 1.225745 CGATGTTCGAAGTTGGCGC 60.226 57.895 0.00 0.00 43.74 6.53
2467 2892 0.179250 CACGATGTTCGAAGTTGGCG 60.179 55.000 0.00 1.11 43.74 5.69
2468 2893 0.165944 CCACGATGTTCGAAGTTGGC 59.834 55.000 0.00 0.00 43.74 4.52
2469 2894 0.165944 GCCACGATGTTCGAAGTTGG 59.834 55.000 0.00 2.09 43.74 3.77
2470 2895 0.165944 GGCCACGATGTTCGAAGTTG 59.834 55.000 0.00 0.00 43.74 3.16
2471 2896 1.289109 CGGCCACGATGTTCGAAGTT 61.289 55.000 2.24 0.00 43.74 2.66
2472 2897 1.736645 CGGCCACGATGTTCGAAGT 60.737 57.895 2.24 0.00 43.74 3.01
2473 2898 1.445410 TCGGCCACGATGTTCGAAG 60.445 57.895 2.24 0.00 45.59 3.79
2474 2899 2.651945 TCGGCCACGATGTTCGAA 59.348 55.556 2.24 0.00 45.59 3.71
2488 2913 1.930908 GATATAGACGCGGGGGTCGG 61.931 65.000 12.47 0.00 41.81 4.79
2489 2914 1.239296 TGATATAGACGCGGGGGTCG 61.239 60.000 12.47 0.00 41.81 4.79
2490 2915 0.963962 TTGATATAGACGCGGGGGTC 59.036 55.000 12.47 7.71 37.19 4.46
2491 2916 0.677842 GTTGATATAGACGCGGGGGT 59.322 55.000 12.47 0.00 0.00 4.95
2492 2917 0.677288 TGTTGATATAGACGCGGGGG 59.323 55.000 12.47 0.00 0.00 5.40
2493 2918 2.519377 TTGTTGATATAGACGCGGGG 57.481 50.000 12.47 0.00 0.00 5.73
2494 2919 2.542595 GGTTTGTTGATATAGACGCGGG 59.457 50.000 12.47 0.00 0.00 6.13
2495 2920 2.217847 CGGTTTGTTGATATAGACGCGG 59.782 50.000 12.47 0.00 0.00 6.46
2496 2921 2.217847 CCGGTTTGTTGATATAGACGCG 59.782 50.000 3.53 3.53 0.00 6.01
2497 2922 3.450578 TCCGGTTTGTTGATATAGACGC 58.549 45.455 0.00 0.00 0.00 5.19
2498 2923 4.679662 ACTCCGGTTTGTTGATATAGACG 58.320 43.478 0.00 0.00 0.00 4.18
2499 2924 4.738740 CGACTCCGGTTTGTTGATATAGAC 59.261 45.833 0.00 0.00 0.00 2.59
2500 2925 4.735578 GCGACTCCGGTTTGTTGATATAGA 60.736 45.833 0.00 0.00 36.06 1.98
2501 2926 3.489785 GCGACTCCGGTTTGTTGATATAG 59.510 47.826 0.00 0.00 36.06 1.31
2502 2927 3.119065 TGCGACTCCGGTTTGTTGATATA 60.119 43.478 0.00 0.00 36.06 0.86
2503 2928 2.277084 GCGACTCCGGTTTGTTGATAT 58.723 47.619 0.00 0.00 36.06 1.63
2504 2929 1.001068 TGCGACTCCGGTTTGTTGATA 59.999 47.619 0.00 0.00 36.06 2.15
2505 2930 0.250124 TGCGACTCCGGTTTGTTGAT 60.250 50.000 0.00 0.00 36.06 2.57
2506 2931 1.144276 TGCGACTCCGGTTTGTTGA 59.856 52.632 0.00 0.00 36.06 3.18
2507 2932 1.278637 GTGCGACTCCGGTTTGTTG 59.721 57.895 0.00 4.66 36.06 3.33
2508 2933 1.890510 GGTGCGACTCCGGTTTGTT 60.891 57.895 0.00 0.00 36.06 2.83
2509 2934 2.280592 GGTGCGACTCCGGTTTGT 60.281 61.111 0.00 0.00 36.06 2.83
2510 2935 3.047877 GGGTGCGACTCCGGTTTG 61.048 66.667 0.00 0.00 36.06 2.93
2511 2936 4.675029 CGGGTGCGACTCCGGTTT 62.675 66.667 0.00 0.00 42.32 3.27
2523 2948 2.740826 AATTCGTGCGGACGGGTG 60.741 61.111 29.10 0.94 46.11 4.61
2524 2949 2.740826 CAATTCGTGCGGACGGGT 60.741 61.111 29.10 15.15 46.11 5.28
2525 2950 4.160635 GCAATTCGTGCGGACGGG 62.161 66.667 29.10 16.63 45.10 5.28
2533 2958 2.787249 CCCGCTGAGCAATTCGTG 59.213 61.111 4.88 0.00 0.00 4.35
2534 2959 3.127533 GCCCGCTGAGCAATTCGT 61.128 61.111 4.88 0.00 0.00 3.85
2535 2960 4.228097 CGCCCGCTGAGCAATTCG 62.228 66.667 4.88 0.00 0.00 3.34
2536 2961 4.543084 GCGCCCGCTGAGCAATTC 62.543 66.667 4.88 0.00 39.89 2.17
2557 2982 4.569180 CATAGGGGTGGCGGCCTG 62.569 72.222 21.46 4.03 0.00 4.85
2559 2984 4.564110 GACATAGGGGTGGCGGCC 62.564 72.222 13.32 13.32 0.00 6.13
2560 2985 4.564110 GGACATAGGGGTGGCGGC 62.564 72.222 0.00 0.00 0.00 6.53
2561 2986 3.873812 GGGACATAGGGGTGGCGG 61.874 72.222 0.00 0.00 0.00 6.13
2562 2987 3.087253 TGGGACATAGGGGTGGCG 61.087 66.667 0.00 0.00 0.00 5.69
2563 2988 1.984288 GACTGGGACATAGGGGTGGC 61.984 65.000 0.00 0.00 38.20 5.01
2564 2989 0.326618 AGACTGGGACATAGGGGTGG 60.327 60.000 0.00 0.00 38.20 4.61
2565 2990 2.040178 GTAGACTGGGACATAGGGGTG 58.960 57.143 0.00 0.00 38.20 4.61
2566 2991 1.938069 AGTAGACTGGGACATAGGGGT 59.062 52.381 0.00 0.00 38.20 4.95
2567 2992 2.599677 GAGTAGACTGGGACATAGGGG 58.400 57.143 0.00 0.00 38.20 4.79
2568 2993 2.091278 TGGAGTAGACTGGGACATAGGG 60.091 54.545 0.00 0.00 38.20 3.53
2569 2994 3.314307 TGGAGTAGACTGGGACATAGG 57.686 52.381 0.00 0.00 38.20 2.57
2570 2995 4.474394 TGATGGAGTAGACTGGGACATAG 58.526 47.826 0.00 0.00 38.20 2.23
2571 2996 4.536295 TGATGGAGTAGACTGGGACATA 57.464 45.455 0.00 0.00 38.20 2.29
2572 2997 3.404869 TGATGGAGTAGACTGGGACAT 57.595 47.619 0.00 0.00 38.20 3.06
2573 2998 2.832129 GTTGATGGAGTAGACTGGGACA 59.168 50.000 0.00 0.00 0.00 4.02
2574 2999 3.100671 AGTTGATGGAGTAGACTGGGAC 58.899 50.000 0.00 0.00 0.00 4.46
2575 3000 3.011821 AGAGTTGATGGAGTAGACTGGGA 59.988 47.826 0.00 0.00 0.00 4.37
2576 3001 3.131933 CAGAGTTGATGGAGTAGACTGGG 59.868 52.174 0.00 0.00 0.00 4.45
2577 3002 3.131933 CCAGAGTTGATGGAGTAGACTGG 59.868 52.174 0.00 0.00 40.51 4.00
2578 3003 4.019858 TCCAGAGTTGATGGAGTAGACTG 58.980 47.826 0.00 0.00 41.96 3.51
2579 3004 4.323569 TCCAGAGTTGATGGAGTAGACT 57.676 45.455 0.00 0.00 41.96 3.24
2586 3011 3.507162 TTTTGCTCCAGAGTTGATGGA 57.493 42.857 0.00 0.00 44.63 3.41
2604 3029 7.069455 GGTGGAGGCTGGTAATATGTTATTTTT 59.931 37.037 0.00 0.00 0.00 1.94
2605 3030 6.549736 GGTGGAGGCTGGTAATATGTTATTTT 59.450 38.462 0.00 0.00 0.00 1.82
2606 3031 6.068670 GGTGGAGGCTGGTAATATGTTATTT 58.931 40.000 0.00 0.00 0.00 1.40
2607 3032 5.372661 AGGTGGAGGCTGGTAATATGTTATT 59.627 40.000 0.00 0.00 0.00 1.40
2608 3033 4.913968 AGGTGGAGGCTGGTAATATGTTAT 59.086 41.667 0.00 0.00 0.00 1.89
2609 3034 4.102524 CAGGTGGAGGCTGGTAATATGTTA 59.897 45.833 0.00 0.00 0.00 2.41
2610 3035 3.117888 CAGGTGGAGGCTGGTAATATGTT 60.118 47.826 0.00 0.00 0.00 2.71
2611 3036 2.439507 CAGGTGGAGGCTGGTAATATGT 59.560 50.000 0.00 0.00 0.00 2.29
2612 3037 2.811873 GCAGGTGGAGGCTGGTAATATG 60.812 54.545 0.00 0.00 0.00 1.78
2613 3038 1.421646 GCAGGTGGAGGCTGGTAATAT 59.578 52.381 0.00 0.00 0.00 1.28
2614 3039 0.837272 GCAGGTGGAGGCTGGTAATA 59.163 55.000 0.00 0.00 0.00 0.98
2615 3040 1.207488 TGCAGGTGGAGGCTGGTAAT 61.207 55.000 0.00 0.00 0.00 1.89
2616 3041 1.845664 TGCAGGTGGAGGCTGGTAA 60.846 57.895 0.00 0.00 0.00 2.85
2617 3042 2.203922 TGCAGGTGGAGGCTGGTA 60.204 61.111 0.00 0.00 0.00 3.25
2618 3043 3.958860 GTGCAGGTGGAGGCTGGT 61.959 66.667 0.00 0.00 0.00 4.00
2619 3044 4.729918 GGTGCAGGTGGAGGCTGG 62.730 72.222 0.00 0.00 0.00 4.85
2623 3048 3.402681 ATCCGGTGCAGGTGGAGG 61.403 66.667 0.00 0.00 34.75 4.30
2624 3049 2.124983 CATCCGGTGCAGGTGGAG 60.125 66.667 0.00 0.00 34.75 3.86
2625 3050 3.716195 CCATCCGGTGCAGGTGGA 61.716 66.667 0.00 0.86 35.72 4.02
2627 3052 4.415150 AGCCATCCGGTGCAGGTG 62.415 66.667 14.09 0.00 33.28 4.00
2628 3053 4.101448 GAGCCATCCGGTGCAGGT 62.101 66.667 14.09 2.62 33.28 4.00
2629 3054 2.898920 ATTGAGCCATCCGGTGCAGG 62.899 60.000 14.09 7.75 33.28 4.85
2630 3055 1.452651 ATTGAGCCATCCGGTGCAG 60.453 57.895 14.09 0.00 33.28 4.41
2631 3056 1.750018 CATTGAGCCATCCGGTGCA 60.750 57.895 14.09 0.00 33.28 4.57
2632 3057 2.484062 CCATTGAGCCATCCGGTGC 61.484 63.158 0.00 2.95 33.28 5.01
2633 3058 1.825191 CCCATTGAGCCATCCGGTG 60.825 63.158 0.00 0.00 33.28 4.94
2634 3059 2.597340 CCCATTGAGCCATCCGGT 59.403 61.111 0.00 0.00 33.28 5.28
2635 3060 2.908940 GCCCATTGAGCCATCCGG 60.909 66.667 0.00 0.00 0.00 5.14
2636 3061 1.529948 ATGCCCATTGAGCCATCCG 60.530 57.895 0.00 0.00 0.00 4.18
2637 3062 2.046938 CATGCCCATTGAGCCATCC 58.953 57.895 0.00 0.00 0.00 3.51
2638 3063 1.366366 GCATGCCCATTGAGCCATC 59.634 57.895 6.36 0.00 0.00 3.51
2639 3064 2.495409 CGCATGCCCATTGAGCCAT 61.495 57.895 13.15 0.00 0.00 4.40
2640 3065 3.142162 CGCATGCCCATTGAGCCA 61.142 61.111 13.15 0.00 0.00 4.75
2641 3066 4.580551 GCGCATGCCCATTGAGCC 62.581 66.667 13.15 0.00 33.98 4.70
2642 3067 3.829044 TGCGCATGCCCATTGAGC 61.829 61.111 13.15 8.36 41.78 4.26
2643 3068 2.103538 GTGCGCATGCCCATTGAG 59.896 61.111 15.91 0.00 41.78 3.02
2644 3069 2.215465 CTTGTGCGCATGCCCATTGA 62.215 55.000 15.91 0.00 41.78 2.57
2645 3070 1.807981 CTTGTGCGCATGCCCATTG 60.808 57.895 15.91 0.00 41.78 2.82
2646 3071 2.216750 GACTTGTGCGCATGCCCATT 62.217 55.000 15.91 0.00 41.78 3.16
2647 3072 2.677524 ACTTGTGCGCATGCCCAT 60.678 55.556 15.91 0.00 41.78 4.00
2648 3073 3.364441 GACTTGTGCGCATGCCCA 61.364 61.111 15.91 6.51 41.78 5.36
2649 3074 4.465512 CGACTTGTGCGCATGCCC 62.466 66.667 15.91 3.10 41.78 5.36
2658 3083 3.716006 CAGTGGCGGCGACTTGTG 61.716 66.667 16.45 4.52 0.00 3.33
2669 3094 2.485795 TTGACCAAACCGCAGTGGC 61.486 57.895 0.00 0.00 43.94 5.01
2670 3095 1.101049 AGTTGACCAAACCGCAGTGG 61.101 55.000 0.00 0.00 46.41 4.00
2671 3096 0.738389 AAGTTGACCAAACCGCAGTG 59.262 50.000 0.00 0.00 39.85 3.66
2672 3097 1.470051 AAAGTTGACCAAACCGCAGT 58.530 45.000 0.00 0.00 39.85 4.40
2673 3098 3.181495 TGTTAAAGTTGACCAAACCGCAG 60.181 43.478 0.00 0.00 39.85 5.18
2674 3099 2.753452 TGTTAAAGTTGACCAAACCGCA 59.247 40.909 0.00 0.00 39.85 5.69
2675 3100 3.423996 TGTTAAAGTTGACCAAACCGC 57.576 42.857 0.00 0.00 39.85 5.68
2676 3101 3.794564 GCTTGTTAAAGTTGACCAAACCG 59.205 43.478 0.00 0.00 39.85 4.44
2677 3102 4.116961 GGCTTGTTAAAGTTGACCAAACC 58.883 43.478 0.00 0.00 39.85 3.27
2678 3103 4.565166 GTGGCTTGTTAAAGTTGACCAAAC 59.435 41.667 0.00 0.00 39.24 2.93
2679 3104 4.382147 GGTGGCTTGTTAAAGTTGACCAAA 60.382 41.667 0.00 0.00 35.69 3.28
2680 3105 3.131400 GGTGGCTTGTTAAAGTTGACCAA 59.869 43.478 0.00 0.00 35.69 3.67
2681 3106 2.691011 GGTGGCTTGTTAAAGTTGACCA 59.309 45.455 0.00 0.00 35.69 4.02
2682 3107 2.287368 CGGTGGCTTGTTAAAGTTGACC 60.287 50.000 0.00 0.00 35.69 4.02
2683 3108 2.287368 CCGGTGGCTTGTTAAAGTTGAC 60.287 50.000 0.00 0.00 35.69 3.18
2684 3109 1.950909 CCGGTGGCTTGTTAAAGTTGA 59.049 47.619 0.00 0.00 35.69 3.18
2685 3110 1.000717 CCCGGTGGCTTGTTAAAGTTG 60.001 52.381 0.00 0.00 35.69 3.16
2686 3111 1.324383 CCCGGTGGCTTGTTAAAGTT 58.676 50.000 0.00 0.00 35.69 2.66
2687 3112 0.184211 ACCCGGTGGCTTGTTAAAGT 59.816 50.000 0.00 0.00 35.69 2.66
2688 3113 0.879090 GACCCGGTGGCTTGTTAAAG 59.121 55.000 0.00 0.00 36.41 1.85
2689 3114 0.885596 CGACCCGGTGGCTTGTTAAA 60.886 55.000 0.00 0.00 33.59 1.52
2690 3115 1.301874 CGACCCGGTGGCTTGTTAA 60.302 57.895 0.00 0.00 33.59 2.01
2691 3116 1.756408 TTCGACCCGGTGGCTTGTTA 61.756 55.000 0.00 0.00 33.59 2.41
2692 3117 2.406002 ATTCGACCCGGTGGCTTGTT 62.406 55.000 0.00 0.00 33.59 2.83
2693 3118 2.798148 GATTCGACCCGGTGGCTTGT 62.798 60.000 0.00 0.00 33.59 3.16
2694 3119 2.046314 ATTCGACCCGGTGGCTTG 60.046 61.111 0.00 0.00 33.59 4.01
2695 3120 1.910580 ATGATTCGACCCGGTGGCTT 61.911 55.000 0.00 0.00 33.59 4.35
2696 3121 2.311688 GATGATTCGACCCGGTGGCT 62.312 60.000 0.00 0.00 33.59 4.75
2697 3122 1.887707 GATGATTCGACCCGGTGGC 60.888 63.158 0.00 0.00 33.59 5.01
2698 3123 4.438346 GATGATTCGACCCGGTGG 57.562 61.111 0.00 0.00 37.80 4.61
2707 3132 1.202533 AGTAACCCAGCCGATGATTCG 60.203 52.381 0.00 0.00 45.08 3.34
2708 3133 2.484889 GAGTAACCCAGCCGATGATTC 58.515 52.381 0.00 0.00 0.00 2.52
2709 3134 1.141053 GGAGTAACCCAGCCGATGATT 59.859 52.381 0.00 0.00 0.00 2.57
2710 3135 0.759346 GGAGTAACCCAGCCGATGAT 59.241 55.000 0.00 0.00 0.00 2.45
2711 3136 2.208527 GGAGTAACCCAGCCGATGA 58.791 57.895 0.00 0.00 0.00 2.92
2712 3137 4.857251 GGAGTAACCCAGCCGATG 57.143 61.111 0.00 0.00 0.00 3.84


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.