Multiple sequence alignment - TraesCS4A01G171800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G171800 chr4A 100.000 7255 0 0 1 7255 436378868 436386122 0.000000e+00 13398.0
1 TraesCS4A01G171800 chr4A 85.150 633 94 0 4792 5424 385772745 385773377 0.000000e+00 649.0
2 TraesCS4A01G171800 chr4A 93.548 93 5 1 6719 6810 173652950 173652858 3.530000e-28 137.0
3 TraesCS4A01G171800 chr4A 92.473 93 6 1 6719 6810 520182060 520181968 1.640000e-26 132.0
4 TraesCS4A01G171800 chr4A 90.722 97 8 1 6715 6810 530173874 530173970 2.120000e-25 128.0
5 TraesCS4A01G171800 chr4A 84.127 126 18 2 6997 7120 687177777 687177652 3.550000e-23 121.0
6 TraesCS4A01G171800 chr4D 97.385 4704 96 15 789 5484 130575694 130571010 0.000000e+00 7980.0
7 TraesCS4A01G171800 chr4D 96.950 787 24 0 5810 6596 130570745 130569959 0.000000e+00 1321.0
8 TraesCS4A01G171800 chr4D 84.992 633 95 0 4792 5424 164881771 164882403 1.710000e-180 643.0
9 TraesCS4A01G171800 chr4D 83.412 633 71 12 1 609 130576308 130575686 2.290000e-154 556.0
10 TraesCS4A01G171800 chr4D 97.285 221 2 2 5592 5811 130571012 130570795 8.890000e-99 372.0
11 TraesCS4A01G171800 chr4D 97.297 148 3 1 7109 7255 130569763 130569616 4.350000e-62 250.0
12 TraesCS4A01G171800 chr4D 86.702 188 19 5 602 788 70335880 70335698 3.430000e-48 204.0
13 TraesCS4A01G171800 chr4D 96.078 51 1 1 6665 6715 130569916 130569867 1.680000e-11 82.4
14 TraesCS4A01G171800 chr4D 97.143 35 1 0 6681 6715 130569959 130569925 7.860000e-05 60.2
15 TraesCS4A01G171800 chrUn 98.289 3390 47 8 2099 5484 55739235 55735853 0.000000e+00 5928.0
16 TraesCS4A01G171800 chrUn 96.538 1300 36 4 789 2084 55741346 55740052 0.000000e+00 2143.0
17 TraesCS4A01G171800 chrUn 97.487 756 16 2 5810 6565 55735586 55734834 0.000000e+00 1288.0
18 TraesCS4A01G171800 chrUn 81.705 563 72 19 1 538 55742046 55741490 2.400000e-119 440.0
19 TraesCS4A01G171800 chrUn 98.190 221 3 1 5592 5811 55735855 55735635 1.140000e-102 385.0
20 TraesCS4A01G171800 chrUn 87.027 185 20 4 607 789 70301612 70301794 9.540000e-49 206.0
21 TraesCS4A01G171800 chrUn 92.308 143 3 1 7113 7255 55732382 55732248 5.740000e-46 196.0
22 TraesCS4A01G171800 chrUn 96.104 77 1 2 6625 6700 55734825 55734750 2.750000e-24 124.0
23 TraesCS4A01G171800 chrUn 100.000 32 0 0 2077 2108 55739435 55739404 7.860000e-05 60.2
24 TraesCS4A01G171800 chr4B 85.150 633 94 0 4792 5424 207102378 207103010 0.000000e+00 649.0
25 TraesCS4A01G171800 chr4B 89.256 121 9 4 5475 5593 591136175 591136293 1.630000e-31 148.0
26 TraesCS4A01G171800 chr4B 86.555 119 16 0 6991 7109 27399418 27399536 1.640000e-26 132.0
27 TraesCS4A01G171800 chr4B 87.640 89 9 2 6803 6889 434476199 434476111 1.290000e-17 102.0
28 TraesCS4A01G171800 chr5D 82.665 623 105 1 4792 5414 447875136 447874517 3.830000e-152 549.0
29 TraesCS4A01G171800 chr5D 87.634 186 19 4 606 789 30728633 30728816 5.700000e-51 213.0
30 TraesCS4A01G171800 chr5D 87.047 193 19 5 610 801 326386606 326386419 5.700000e-51 213.0
31 TraesCS4A01G171800 chr5D 86.667 195 19 6 607 797 339068966 339068775 7.380000e-50 209.0
32 TraesCS4A01G171800 chr5D 85.000 200 24 6 600 796 334887342 334887146 1.600000e-46 198.0
33 TraesCS4A01G171800 chr5D 91.579 95 7 1 6717 6810 90314140 90314234 5.910000e-26 130.0
34 TraesCS4A01G171800 chr5D 89.041 73 5 3 4587 4658 447875286 447875216 3.610000e-13 87.9
35 TraesCS4A01G171800 chr5A 82.343 623 107 1 4792 5414 565743480 565742861 8.280000e-149 538.0
36 TraesCS4A01G171800 chr5A 86.301 73 7 3 4587 4658 654417026 654416956 7.800000e-10 76.8
37 TraesCS4A01G171800 chr5B 81.380 623 113 1 4792 5414 546810247 546809628 8.400000e-139 505.0
38 TraesCS4A01G171800 chr5B 87.770 139 9 7 5481 5614 576921366 576921231 9.750000e-34 156.0
39 TraesCS4A01G171800 chr5B 90.083 121 7 2 5477 5593 576921246 576921365 1.260000e-32 152.0
40 TraesCS4A01G171800 chr5B 89.256 121 9 2 5477 5593 86581216 86581336 1.630000e-31 148.0
41 TraesCS4A01G171800 chr5B 86.667 120 15 1 6991 7110 108559715 108559597 1.640000e-26 132.0
42 TraesCS4A01G171800 chr5B 95.181 83 3 1 6729 6810 473790477 473790395 5.910000e-26 130.0
43 TraesCS4A01G171800 chr5B 96.721 61 2 0 6830 6890 698260657 698260717 1.290000e-17 102.0
44 TraesCS4A01G171800 chr7A 87.978 183 18 3 611 789 730830857 730830675 5.700000e-51 213.0
45 TraesCS4A01G171800 chr6D 87.912 182 19 3 610 789 316230242 316230422 2.050000e-50 211.0
46 TraesCS4A01G171800 chr6D 89.216 102 9 2 6710 6810 329858479 329858379 7.640000e-25 126.0
47 TraesCS4A01G171800 chr3B 80.989 263 48 2 4815 5076 570068718 570068457 2.650000e-49 207.0
48 TraesCS4A01G171800 chr3B 85.366 123 18 0 6991 7113 697907441 697907319 2.120000e-25 128.0
49 TraesCS4A01G171800 chr3B 93.651 63 3 1 6824 6885 801009432 801009370 7.750000e-15 93.5
50 TraesCS4A01G171800 chr2D 84.615 208 29 3 597 801 48184504 48184297 3.430000e-48 204.0
51 TraesCS4A01G171800 chr2D 89.216 102 9 2 6710 6810 516381929 516381829 7.640000e-25 126.0
52 TraesCS4A01G171800 chr6B 91.803 122 6 3 5478 5595 119827865 119827744 4.500000e-37 167.0
53 TraesCS4A01G171800 chr6B 90.517 116 7 3 5482 5593 119827746 119827861 4.530000e-32 150.0
54 TraesCS4A01G171800 chr6B 92.857 98 5 2 6730 6825 488550205 488550302 2.730000e-29 141.0
55 TraesCS4A01G171800 chr6B 95.385 65 2 1 6824 6887 642725773 642725709 1.290000e-17 102.0
56 TraesCS4A01G171800 chr1D 90.435 115 9 2 5482 5595 360356247 360356360 4.530000e-32 150.0
57 TraesCS4A01G171800 chr1D 90.435 115 8 3 5482 5594 96183611 96183498 1.630000e-31 148.0
58 TraesCS4A01G171800 chr1D 92.754 69 4 1 6824 6891 17613630 17613698 1.670000e-16 99.0
59 TraesCS4A01G171800 chr2B 89.831 118 8 3 5482 5598 547858397 547858283 1.630000e-31 148.0
60 TraesCS4A01G171800 chr2B 85.612 139 17 2 6983 7119 26551630 26551493 7.590000e-30 143.0
61 TraesCS4A01G171800 chr2B 94.624 93 4 1 6719 6810 34111181 34111089 7.590000e-30 143.0
62 TraesCS4A01G171800 chr2B 84.173 139 19 2 6983 7119 26533960 26533823 1.640000e-26 132.0
63 TraesCS4A01G171800 chr2B 78.443 167 16 11 6720 6885 510894742 510894889 2.790000e-14 91.6
64 TraesCS4A01G171800 chr2B 86.301 73 7 3 4587 4658 62787031 62787101 7.800000e-10 76.8
65 TraesCS4A01G171800 chr1B 85.926 135 17 2 6977 7110 12810824 12810691 7.590000e-30 143.0
66 TraesCS4A01G171800 chr1B 85.600 125 18 0 6984 7108 301265583 301265459 1.640000e-26 132.0
67 TraesCS4A01G171800 chr1B 85.366 123 18 0 6985 7107 674620750 674620628 2.120000e-25 128.0
68 TraesCS4A01G171800 chr1B 87.500 72 7 2 4588 4658 141681397 141681467 1.680000e-11 82.4
69 TraesCS4A01G171800 chr6A 96.875 64 1 1 6824 6886 610234845 610234908 9.950000e-19 106.0
70 TraesCS4A01G171800 chr6A 90.909 77 4 2 6811 6886 578699938 578700012 4.630000e-17 100.0
71 TraesCS4A01G171800 chr7B 90.909 77 4 2 6811 6886 745482637 745482711 4.630000e-17 100.0
72 TraesCS4A01G171800 chr2A 87.671 73 6 3 4587 4658 611734591 611734521 1.680000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G171800 chr4A 436378868 436386122 7254 False 13398.000000 13398 100.000000 1 7255 1 chr4A.!!$F2 7254
1 TraesCS4A01G171800 chr4A 385772745 385773377 632 False 649.000000 649 85.150000 4792 5424 1 chr4A.!!$F1 632
2 TraesCS4A01G171800 chr4D 130569616 130576308 6692 True 1517.371429 7980 95.078571 1 7255 7 chr4D.!!$R2 7254
3 TraesCS4A01G171800 chr4D 164881771 164882403 632 False 643.000000 643 84.992000 4792 5424 1 chr4D.!!$F1 632
4 TraesCS4A01G171800 chrUn 55732248 55742046 9798 True 1320.525000 5928 95.077625 1 7255 8 chrUn.!!$R1 7254
5 TraesCS4A01G171800 chr4B 207102378 207103010 632 False 649.000000 649 85.150000 4792 5424 1 chr4B.!!$F2 632
6 TraesCS4A01G171800 chr5D 447874517 447875286 769 True 318.450000 549 85.853000 4587 5414 2 chr5D.!!$R4 827
7 TraesCS4A01G171800 chr5A 565742861 565743480 619 True 538.000000 538 82.343000 4792 5414 1 chr5A.!!$R1 622
8 TraesCS4A01G171800 chr5B 546809628 546810247 619 True 505.000000 505 81.380000 4792 5414 1 chr5B.!!$R3 622


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
877 986 0.323542 AGACCGGACCGACAGAAGAT 60.324 55.000 17.49 0.0 0.00 2.40 F
1327 1436 0.320697 GGAACGAACTACTGGGCTGT 59.679 55.000 0.00 0.0 0.00 4.40 F
2498 3412 0.038166 TCCCCTCATGGCAAGTCAAC 59.962 55.000 0.00 0.0 0.00 3.18 F
3376 4294 0.252696 TGCTGGATCACCTACCCAGT 60.253 55.000 0.00 0.0 46.86 4.00 F
3692 4610 3.626217 CCAATAAGGCGAGAGGGTAAAAC 59.374 47.826 0.00 0.0 0.00 2.43 F
5502 6420 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.0 0.00 2.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1993 2102 1.603455 ACGGTGATGCCTTTGGTGG 60.603 57.895 0.0 0.00 34.25 4.61 R
3109 4027 2.544277 GCTTGCTGCTTCAACACAATCA 60.544 45.455 0.0 0.00 38.95 2.57 R
3413 4331 2.194201 AAAGTACCACATCCGGTTGG 57.806 50.000 16.7 15.95 40.67 3.77 R
4299 5217 3.782523 ACATTCCAGGAATAGAAGAGCCA 59.217 43.478 14.8 0.00 30.44 4.75 R
5576 6494 0.042131 ATGTACTCCCTCCGTCCCAA 59.958 55.000 0.0 0.00 0.00 4.12 R
6597 7601 0.037790 GTGACTGTGAGAGGTCCTGC 60.038 60.000 0.0 0.00 0.00 4.85 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.408756 TTTAGCCATAAATCTTTCTGCACAT 57.591 32.000 0.00 0.00 0.00 3.21
26 27 8.518430 TTAGCCATAAATCTTTCTGCACATAA 57.482 30.769 0.00 0.00 0.00 1.90
30 31 9.101655 GCCATAAATCTTTCTGCACATAATTTT 57.898 29.630 0.00 0.00 0.00 1.82
39 40 8.674263 TTTCTGCACATAATTTTCAATTGGTT 57.326 26.923 5.42 0.00 0.00 3.67
71 72 6.712998 CCATATGACAACCGGTTATTCCATTA 59.287 38.462 21.79 11.12 35.57 1.90
74 75 7.654022 ATGACAACCGGTTATTCCATTATTT 57.346 32.000 21.79 0.00 35.57 1.40
83 84 8.147704 CCGGTTATTCCATTATTTTGCCTTATT 58.852 33.333 0.00 0.00 35.57 1.40
136 137 5.556915 ACAAATTCCCGAGACACATCTTTA 58.443 37.500 0.00 0.00 34.34 1.85
138 139 6.072673 ACAAATTCCCGAGACACATCTTTAAC 60.073 38.462 0.00 0.00 34.34 2.01
152 153 8.410912 ACACATCTTTAACTTTAAAAGTCCCAC 58.589 33.333 0.00 0.00 41.91 4.61
217 241 9.506018 TGTTTCTTGACTTCATGAATTAGATCA 57.494 29.630 8.96 5.63 38.99 2.92
219 243 7.761651 TCTTGACTTCATGAATTAGATCACG 57.238 36.000 8.96 6.34 30.82 4.35
220 244 7.547227 TCTTGACTTCATGAATTAGATCACGA 58.453 34.615 8.96 8.30 30.82 4.35
222 246 8.722480 TTGACTTCATGAATTAGATCACGATT 57.278 30.769 8.96 0.00 30.82 3.34
239 263 7.770801 TCACGATTAATTGAATACTCAGTGG 57.229 36.000 9.79 0.00 31.69 4.00
248 272 6.698008 TTGAATACTCAGTGGCATAATTGG 57.302 37.500 0.00 0.00 31.69 3.16
259 283 5.013183 AGTGGCATAATTGGTAGGATAGACC 59.987 44.000 0.00 0.00 37.49 3.85
261 285 5.221843 TGGCATAATTGGTAGGATAGACCAC 60.222 44.000 0.00 0.00 46.70 4.16
320 344 7.122799 ACTCTCTTATAAATTTCCTTGGTTGCC 59.877 37.037 0.00 0.00 0.00 4.52
435 459 7.518211 CGGAAAGCATGAAATATAATCACGTCA 60.518 37.037 0.00 0.00 0.00 4.35
453 477 6.984474 TCACGTCAAAAGTCTATTTTCAGTCT 59.016 34.615 0.00 0.00 0.00 3.24
460 484 6.672266 AAGTCTATTTTCAGTCTGACTCCA 57.328 37.500 7.49 0.00 34.23 3.86
471 495 4.151335 CAGTCTGACTCCACTTCATTTTCG 59.849 45.833 7.49 0.00 0.00 3.46
487 511 0.796312 TTCGCTCCGAAACAATCTGC 59.204 50.000 0.00 0.00 43.00 4.26
506 530 3.814625 TGCATACAAATTATCCGCTCCA 58.185 40.909 0.00 0.00 0.00 3.86
507 531 4.397420 TGCATACAAATTATCCGCTCCAT 58.603 39.130 0.00 0.00 0.00 3.41
563 668 1.824852 GGGAAAAGCATCACCCGATTT 59.175 47.619 0.00 0.00 32.73 2.17
572 677 4.999950 AGCATCACCCGATTTCATCTAATC 59.000 41.667 0.00 0.00 0.00 1.75
582 687 7.345192 CCGATTTCATCTAATCCGTTTACAAG 58.655 38.462 0.00 0.00 32.12 3.16
589 694 8.262227 TCATCTAATCCGTTTACAAGTGGTATT 58.738 33.333 0.00 0.00 0.00 1.89
595 700 4.143052 CCGTTTACAAGTGGTATTTCCGTC 60.143 45.833 0.00 0.00 39.52 4.79
597 702 5.389098 CGTTTACAAGTGGTATTTCCGTCAG 60.389 44.000 0.00 0.00 39.52 3.51
600 705 4.906618 ACAAGTGGTATTTCCGTCAGATT 58.093 39.130 0.00 0.00 39.52 2.40
601 706 6.045072 ACAAGTGGTATTTCCGTCAGATTA 57.955 37.500 0.00 0.00 39.52 1.75
602 707 6.469410 ACAAGTGGTATTTCCGTCAGATTAA 58.531 36.000 0.00 0.00 39.52 1.40
603 708 7.110155 ACAAGTGGTATTTCCGTCAGATTAAT 58.890 34.615 0.00 0.00 39.52 1.40
604 709 8.262227 ACAAGTGGTATTTCCGTCAGATTAATA 58.738 33.333 0.00 0.00 39.52 0.98
605 710 9.273016 CAAGTGGTATTTCCGTCAGATTAATAT 57.727 33.333 0.00 0.00 39.52 1.28
614 719 9.543231 TTTCCGTCAGATTAATATATAGGGTCT 57.457 33.333 0.00 0.00 0.00 3.85
615 720 8.521170 TCCGTCAGATTAATATATAGGGTCTG 57.479 38.462 9.40 9.40 34.45 3.51
616 721 8.114102 TCCGTCAGATTAATATATAGGGTCTGT 58.886 37.037 12.92 0.00 34.68 3.41
617 722 8.407064 CCGTCAGATTAATATATAGGGTCTGTC 58.593 40.741 12.92 9.10 34.68 3.51
618 723 9.179909 CGTCAGATTAATATATAGGGTCTGTCT 57.820 37.037 12.92 0.00 34.68 3.41
638 743 9.278978 TCTGTCTAAGACACATCTAGATATGAC 57.721 37.037 17.82 11.42 37.67 3.06
639 744 8.980481 TGTCTAAGACACATCTAGATATGACA 57.020 34.615 17.82 7.35 37.67 3.58
640 745 9.579932 TGTCTAAGACACATCTAGATATGACAT 57.420 33.333 17.82 7.18 37.67 3.06
668 773 9.593565 ACTATATCACATCTAACCTGATCTTCA 57.406 33.333 0.00 0.00 0.00 3.02
669 774 9.853555 CTATATCACATCTAACCTGATCTTCAC 57.146 37.037 0.00 0.00 0.00 3.18
670 775 6.805016 ATCACATCTAACCTGATCTTCACT 57.195 37.500 0.00 0.00 0.00 3.41
671 776 5.970592 TCACATCTAACCTGATCTTCACTG 58.029 41.667 0.00 0.00 0.00 3.66
672 777 5.481824 TCACATCTAACCTGATCTTCACTGT 59.518 40.000 0.00 0.00 0.00 3.55
673 778 5.579904 CACATCTAACCTGATCTTCACTGTG 59.420 44.000 0.17 0.17 0.00 3.66
674 779 5.247110 ACATCTAACCTGATCTTCACTGTGT 59.753 40.000 7.79 0.00 0.00 3.72
675 780 5.808366 TCTAACCTGATCTTCACTGTGTT 57.192 39.130 7.79 0.00 0.00 3.32
676 781 6.174720 TCTAACCTGATCTTCACTGTGTTT 57.825 37.500 7.79 0.00 0.00 2.83
677 782 5.991606 TCTAACCTGATCTTCACTGTGTTTG 59.008 40.000 7.79 0.00 0.00 2.93
678 783 4.156455 ACCTGATCTTCACTGTGTTTGT 57.844 40.909 7.79 0.00 0.00 2.83
679 784 3.879295 ACCTGATCTTCACTGTGTTTGTG 59.121 43.478 7.79 0.00 36.82 3.33
680 785 3.251729 CCTGATCTTCACTGTGTTTGTGG 59.748 47.826 7.79 0.07 36.21 4.17
681 786 3.879295 CTGATCTTCACTGTGTTTGTGGT 59.121 43.478 7.79 0.00 36.21 4.16
682 787 3.876914 TGATCTTCACTGTGTTTGTGGTC 59.123 43.478 7.79 2.03 36.21 4.02
683 788 3.627395 TCTTCACTGTGTTTGTGGTCT 57.373 42.857 7.79 0.00 36.21 3.85
684 789 4.746535 TCTTCACTGTGTTTGTGGTCTA 57.253 40.909 7.79 0.00 36.21 2.59
685 790 5.290493 TCTTCACTGTGTTTGTGGTCTAT 57.710 39.130 7.79 0.00 36.21 1.98
686 791 5.680619 TCTTCACTGTGTTTGTGGTCTATT 58.319 37.500 7.79 0.00 36.21 1.73
687 792 6.119536 TCTTCACTGTGTTTGTGGTCTATTT 58.880 36.000 7.79 0.00 36.21 1.40
688 793 6.601613 TCTTCACTGTGTTTGTGGTCTATTTT 59.398 34.615 7.79 0.00 36.21 1.82
689 794 6.767524 TCACTGTGTTTGTGGTCTATTTTT 57.232 33.333 7.79 0.00 36.21 1.94
736 841 9.513906 TTTCCTTGTTGATGTGTATTTATGAGA 57.486 29.630 0.00 0.00 0.00 3.27
737 842 8.722480 TCCTTGTTGATGTGTATTTATGAGAG 57.278 34.615 0.00 0.00 0.00 3.20
738 843 8.321353 TCCTTGTTGATGTGTATTTATGAGAGT 58.679 33.333 0.00 0.00 0.00 3.24
739 844 8.950210 CCTTGTTGATGTGTATTTATGAGAGTT 58.050 33.333 0.00 0.00 0.00 3.01
753 858 8.948631 TTTATGAGAGTTTAGATGTGACATCC 57.051 34.615 21.05 6.69 0.00 3.51
754 859 6.805016 ATGAGAGTTTAGATGTGACATCCT 57.195 37.500 21.05 11.37 0.00 3.24
755 860 6.611613 TGAGAGTTTAGATGTGACATCCTT 57.388 37.500 21.05 7.22 0.00 3.36
756 861 7.718334 TGAGAGTTTAGATGTGACATCCTTA 57.282 36.000 21.05 6.22 0.00 2.69
757 862 7.776107 TGAGAGTTTAGATGTGACATCCTTAG 58.224 38.462 21.05 0.00 0.00 2.18
758 863 7.615757 TGAGAGTTTAGATGTGACATCCTTAGA 59.384 37.037 21.05 1.88 0.00 2.10
759 864 8.367660 AGAGTTTAGATGTGACATCCTTAGAA 57.632 34.615 21.05 7.16 0.00 2.10
760 865 8.816894 AGAGTTTAGATGTGACATCCTTAGAAA 58.183 33.333 21.05 11.24 0.00 2.52
761 866 9.436957 GAGTTTAGATGTGACATCCTTAGAAAA 57.563 33.333 21.05 9.88 0.00 2.29
762 867 9.220767 AGTTTAGATGTGACATCCTTAGAAAAC 57.779 33.333 21.05 18.54 0.00 2.43
763 868 8.999431 GTTTAGATGTGACATCCTTAGAAAACA 58.001 33.333 21.05 0.00 0.00 2.83
764 869 9.739276 TTTAGATGTGACATCCTTAGAAAACAT 57.261 29.630 21.05 1.75 0.00 2.71
765 870 7.856145 AGATGTGACATCCTTAGAAAACATC 57.144 36.000 21.05 0.00 41.77 3.06
766 871 7.628234 AGATGTGACATCCTTAGAAAACATCT 58.372 34.615 21.05 8.71 44.92 2.90
767 872 8.762645 AGATGTGACATCCTTAGAAAACATCTA 58.237 33.333 21.05 0.00 46.74 1.98
768 873 8.954950 ATGTGACATCCTTAGAAAACATCTAG 57.045 34.615 0.00 0.00 41.59 2.43
769 874 8.134202 TGTGACATCCTTAGAAAACATCTAGA 57.866 34.615 0.00 0.00 41.59 2.43
770 875 8.762645 TGTGACATCCTTAGAAAACATCTAGAT 58.237 33.333 0.00 0.00 41.59 1.98
771 876 9.039870 GTGACATCCTTAGAAAACATCTAGATG 57.960 37.037 27.63 27.63 42.94 2.90
841 950 4.687483 CCGTTTACATCCGTACTTTCAGTT 59.313 41.667 0.00 0.00 0.00 3.16
842 951 5.389098 CCGTTTACATCCGTACTTTCAGTTG 60.389 44.000 0.00 0.00 0.00 3.16
877 986 0.323542 AGACCGGACCGACAGAAGAT 60.324 55.000 17.49 0.00 0.00 2.40
1015 1124 2.126071 AGATGGCCGACGACAACG 60.126 61.111 0.00 0.00 45.75 4.10
1113 1222 0.398522 TCCCATCTCCGCACCATACT 60.399 55.000 0.00 0.00 0.00 2.12
1201 1310 2.543777 AGTTTCCAAGAGCTTACGCA 57.456 45.000 0.00 0.00 39.10 5.24
1320 1429 1.183676 AGCCGGTGGAACGAACTACT 61.184 55.000 1.90 0.00 38.12 2.57
1327 1436 0.320697 GGAACGAACTACTGGGCTGT 59.679 55.000 0.00 0.00 0.00 4.40
1345 1454 3.663908 CTGTCGCGTTTTGATTGATCTC 58.336 45.455 5.77 0.00 0.00 2.75
1375 1484 8.922058 TCTGTGGTAGATTAGTTCGTTTATTC 57.078 34.615 0.00 0.00 0.00 1.75
1382 1491 4.566659 TTAGTTCGTTTATTCGCCGTTC 57.433 40.909 0.00 0.00 0.00 3.95
1431 1540 0.512952 GGCGTGTAGAAGCAAGTGTG 59.487 55.000 0.00 0.00 34.54 3.82
1455 1564 4.664150 TGTTTTGATTTCTGGGTTGGTC 57.336 40.909 0.00 0.00 0.00 4.02
1461 1570 4.148838 TGATTTCTGGGTTGGTCGATTTT 58.851 39.130 0.00 0.00 0.00 1.82
1559 1668 1.344763 AGGGCGGCTCTGTTGATATAC 59.655 52.381 9.56 0.00 0.00 1.47
1573 1682 8.739972 TCTGTTGATATACGTGTGCATCTATAT 58.260 33.333 0.00 0.00 0.00 0.86
1578 1687 9.614792 TGATATACGTGTGCATCTATATAGAGT 57.385 33.333 17.22 10.28 35.50 3.24
1582 1691 7.747155 ACGTGTGCATCTATATAGAGTTACT 57.253 36.000 17.22 0.00 35.50 2.24
1583 1692 8.843885 ACGTGTGCATCTATATAGAGTTACTA 57.156 34.615 17.22 0.99 35.50 1.82
1625 1734 1.070134 TGCAGCCGTCCAATATAGGTC 59.930 52.381 0.00 0.00 0.00 3.85
1654 1763 3.571590 ACCAAAAGCAACCTGGTCATTA 58.428 40.909 0.00 0.00 39.27 1.90
1671 1780 9.981114 CTGGTCATTAAGACTTTAACCAAAATT 57.019 29.630 0.00 0.00 46.72 1.82
1763 1872 5.010516 CAGATGCTCTACTTATAGTGCCTGT 59.989 44.000 6.06 0.00 44.06 4.00
1767 1876 5.422331 TGCTCTACTTATAGTGCCTGTCTTT 59.578 40.000 6.06 0.00 44.06 2.52
1993 2102 1.301009 GGACAAGGATCGGGATCGC 60.301 63.158 0.00 0.00 38.69 4.58
2251 3164 5.807011 GGTGATAGATTTCCAAAATGCACAC 59.193 40.000 0.00 0.00 0.00 3.82
2498 3412 0.038166 TCCCCTCATGGCAAGTCAAC 59.962 55.000 0.00 0.00 0.00 3.18
2774 3690 0.822944 CACTGGATTGTGCCACACCA 60.823 55.000 6.95 6.95 33.52 4.17
3234 4152 5.961272 TCACCAACCAAGTTTTTCTTCTTC 58.039 37.500 0.00 0.00 33.63 2.87
3376 4294 0.252696 TGCTGGATCACCTACCCAGT 60.253 55.000 0.00 0.00 46.86 4.00
3413 4331 6.538742 ACCACATTGTACTACTGCATTATGAC 59.461 38.462 0.00 0.00 0.00 3.06
3628 4546 9.811655 CATCTGTAACTACAATACAAACACTTG 57.188 33.333 0.00 0.00 35.50 3.16
3692 4610 3.626217 CCAATAAGGCGAGAGGGTAAAAC 59.374 47.826 0.00 0.00 0.00 2.43
3805 4723 6.680872 GCTTTCTCTACGTAAGCACCTCTTAT 60.681 42.308 13.71 0.00 42.84 1.73
3806 4724 6.770746 TTCTCTACGTAAGCACCTCTTATT 57.229 37.500 0.00 0.00 39.29 1.40
3807 4725 7.870509 TTCTCTACGTAAGCACCTCTTATTA 57.129 36.000 0.00 0.00 39.29 0.98
4625 5543 1.130373 CATGCTCGGCGTGTTTATGTT 59.870 47.619 6.85 0.00 40.30 2.71
5383 6301 2.183679 ACCTAGACCAGAGCAGGAAAG 58.816 52.381 0.00 0.00 32.25 2.62
5432 6350 3.458118 TGCAGTTACAGGTATAGCCCAAT 59.542 43.478 0.00 0.00 38.26 3.16
5476 6394 6.157994 TGGCCAACTAATTATCCTCTTGTACT 59.842 38.462 0.61 0.00 0.00 2.73
5488 6406 9.725206 TTATCCTCTTGTACTAAATTACTCCCT 57.275 33.333 0.00 0.00 0.00 4.20
5489 6407 7.657023 TCCTCTTGTACTAAATTACTCCCTC 57.343 40.000 0.00 0.00 0.00 4.30
5490 6408 6.610425 TCCTCTTGTACTAAATTACTCCCTCC 59.390 42.308 0.00 0.00 0.00 4.30
5491 6409 6.461110 TCTTGTACTAAATTACTCCCTCCG 57.539 41.667 0.00 0.00 0.00 4.63
5492 6410 5.954150 TCTTGTACTAAATTACTCCCTCCGT 59.046 40.000 0.00 0.00 0.00 4.69
5493 6411 5.841957 TGTACTAAATTACTCCCTCCGTC 57.158 43.478 0.00 0.00 0.00 4.79
5494 6412 4.646492 TGTACTAAATTACTCCCTCCGTCC 59.354 45.833 0.00 0.00 0.00 4.79
5495 6413 3.036819 ACTAAATTACTCCCTCCGTCCC 58.963 50.000 0.00 0.00 0.00 4.46
5496 6414 1.961133 AAATTACTCCCTCCGTCCCA 58.039 50.000 0.00 0.00 0.00 4.37
5497 6415 1.961133 AATTACTCCCTCCGTCCCAA 58.039 50.000 0.00 0.00 0.00 4.12
5498 6416 1.961133 ATTACTCCCTCCGTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
5499 6417 1.732117 TTACTCCCTCCGTCCCAAAA 58.268 50.000 0.00 0.00 0.00 2.44
5500 6418 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
5501 6419 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
5502 6420 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
5503 6421 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
5504 6422 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
5505 6423 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
5506 6424 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
5507 6425 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
5508 6426 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
5509 6427 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
5510 6428 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
5511 6429 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
5512 6430 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
5513 6431 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
5514 6432 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
5515 6433 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
5516 6434 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
5517 6435 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
5518 6436 8.923270 TCCCAAAATTCTTGTCTTAGATTTGTT 58.077 29.630 0.00 0.00 28.79 2.83
5519 6437 9.546428 CCCAAAATTCTTGTCTTAGATTTGTTT 57.454 29.630 0.00 0.00 28.79 2.83
5527 6445 9.268268 TCTTGTCTTAGATTTGTTTCAATACGT 57.732 29.630 0.00 0.00 0.00 3.57
5557 6475 9.962783 AAGTACTTAATACATCCGTATTGAGAC 57.037 33.333 18.48 13.32 46.85 3.36
5558 6476 9.128404 AGTACTTAATACATCCGTATTGAGACA 57.872 33.333 18.48 7.59 46.85 3.41
5559 6477 9.740239 GTACTTAATACATCCGTATTGAGACAA 57.260 33.333 18.48 0.00 46.85 3.18
5561 6479 9.832445 ACTTAATACATCCGTATTGAGACAAAT 57.168 29.630 18.48 0.17 46.85 2.32
5566 6484 9.698309 ATACATCCGTATTGAGACAAATCTAAG 57.302 33.333 0.00 0.00 34.53 2.18
5567 6485 7.782049 ACATCCGTATTGAGACAAATCTAAGA 58.218 34.615 0.00 0.00 34.34 2.10
5568 6486 7.707035 ACATCCGTATTGAGACAAATCTAAGAC 59.293 37.037 0.00 0.00 34.34 3.01
5569 6487 7.165460 TCCGTATTGAGACAAATCTAAGACA 57.835 36.000 0.00 0.00 34.34 3.41
5570 6488 7.608153 TCCGTATTGAGACAAATCTAAGACAA 58.392 34.615 0.00 0.00 34.34 3.18
5571 6489 7.759886 TCCGTATTGAGACAAATCTAAGACAAG 59.240 37.037 0.00 0.00 34.34 3.16
5572 6490 7.759886 CCGTATTGAGACAAATCTAAGACAAGA 59.240 37.037 0.00 0.00 34.34 3.02
5573 6491 9.140286 CGTATTGAGACAAATCTAAGACAAGAA 57.860 33.333 0.00 0.00 34.34 2.52
5579 6497 9.617975 GAGACAAATCTAAGACAAGAATTTTGG 57.382 33.333 0.00 0.00 34.34 3.28
5580 6498 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
5581 6499 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
5582 6500 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
5583 6501 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
5584 6502 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
5585 6503 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
5586 6504 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
5587 6505 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
5588 6506 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
5589 6507 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
5590 6508 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
5725 6644 8.607459 CAGGTAGTTACTGCTGATGAATTAAAG 58.393 37.037 0.00 0.00 0.00 1.85
5845 6815 8.500837 TCTTTTTGTTATGCGTATGTTTTCAG 57.499 30.769 0.00 0.00 0.00 3.02
5920 6890 7.018235 GCTTTTCTGTTAGCTGATTCTGTTAC 58.982 38.462 0.00 0.00 34.57 2.50
6030 7000 2.623416 GTTTCTGGAGTTGGAAAGGTGG 59.377 50.000 0.00 0.00 33.00 4.61
6167 7137 1.308069 AAGCAAAGACGGCGATGCAT 61.308 50.000 20.95 0.00 41.18 3.96
6288 7258 7.370383 TCTTTTCCAATGACAATAGTGCTTTC 58.630 34.615 0.00 0.00 0.00 2.62
6467 7437 2.487934 CAGGGTATGCCATTCTCTTCG 58.512 52.381 1.04 0.00 36.17 3.79
6494 7464 3.315191 GCGCCCTTGAAAGATTATTAGCA 59.685 43.478 0.00 0.00 0.00 3.49
6565 7535 4.646945 TCTTGAACAACTTGGCATGGTAAA 59.353 37.500 5.31 0.00 0.00 2.01
6596 7600 8.523915 TCCTGTTATTACATTACTACGGAAGA 57.476 34.615 0.00 0.00 32.86 2.87
6597 7601 8.627403 TCCTGTTATTACATTACTACGGAAGAG 58.373 37.037 0.00 0.00 32.86 2.85
6598 7602 7.381678 CCTGTTATTACATTACTACGGAAGAGC 59.618 40.741 0.00 0.00 32.86 4.09
6600 7604 7.919091 TGTTATTACATTACTACGGAAGAGCAG 59.081 37.037 0.00 0.00 0.00 4.24
6601 7605 3.802948 ACATTACTACGGAAGAGCAGG 57.197 47.619 0.00 0.00 0.00 4.85
6602 7606 3.362706 ACATTACTACGGAAGAGCAGGA 58.637 45.455 0.00 0.00 0.00 3.86
6605 7609 0.039911 ACTACGGAAGAGCAGGACCT 59.960 55.000 0.00 0.00 0.00 3.85
6606 7610 0.741915 CTACGGAAGAGCAGGACCTC 59.258 60.000 0.00 0.00 0.00 3.85
6608 7612 0.968393 ACGGAAGAGCAGGACCTCTC 60.968 60.000 11.11 11.11 41.19 3.20
6610 7614 0.534873 GGAAGAGCAGGACCTCTCAC 59.465 60.000 17.83 12.71 41.19 3.51
6611 7615 1.261480 GAAGAGCAGGACCTCTCACA 58.739 55.000 17.83 0.00 41.19 3.58
6612 7616 1.204467 GAAGAGCAGGACCTCTCACAG 59.796 57.143 17.83 0.00 41.19 3.66
6613 7617 0.114168 AGAGCAGGACCTCTCACAGT 59.886 55.000 17.83 1.30 37.66 3.55
6614 7618 0.530288 GAGCAGGACCTCTCACAGTC 59.470 60.000 13.18 0.00 0.00 3.51
6615 7619 0.178950 AGCAGGACCTCTCACAGTCA 60.179 55.000 0.00 0.00 34.58 3.41
6616 7620 0.037790 GCAGGACCTCTCACAGTCAC 60.038 60.000 0.00 0.00 34.58 3.67
6618 7622 2.796557 CAGGACCTCTCACAGTCACTA 58.203 52.381 0.00 0.00 34.58 2.74
6619 7623 3.360867 CAGGACCTCTCACAGTCACTAT 58.639 50.000 0.00 0.00 34.58 2.12
6620 7624 3.380004 CAGGACCTCTCACAGTCACTATC 59.620 52.174 0.00 0.00 34.58 2.08
6621 7625 3.010696 AGGACCTCTCACAGTCACTATCA 59.989 47.826 0.00 0.00 34.58 2.15
6622 7626 3.957497 GGACCTCTCACAGTCACTATCAT 59.043 47.826 0.00 0.00 34.58 2.45
6623 7627 5.103898 AGGACCTCTCACAGTCACTATCATA 60.104 44.000 0.00 0.00 34.58 2.15
6624 7628 5.772672 GGACCTCTCACAGTCACTATCATAT 59.227 44.000 0.00 0.00 34.58 1.78
6625 7629 6.943146 GGACCTCTCACAGTCACTATCATATA 59.057 42.308 0.00 0.00 34.58 0.86
6626 7630 7.120579 GGACCTCTCACAGTCACTATCATATAG 59.879 44.444 0.00 0.00 34.58 1.31
6627 7631 7.522542 ACCTCTCACAGTCACTATCATATAGT 58.477 38.462 0.00 0.00 0.00 2.12
6628 7632 8.661345 ACCTCTCACAGTCACTATCATATAGTA 58.339 37.037 0.00 0.00 0.00 1.82
6629 7633 9.679661 CCTCTCACAGTCACTATCATATAGTAT 57.320 37.037 0.00 0.00 0.00 2.12
6640 7644 9.452065 CACTATCATATAGTATCATTACGTGCC 57.548 37.037 0.00 0.00 33.32 5.01
6641 7645 8.630917 ACTATCATATAGTATCATTACGTGCCC 58.369 37.037 0.00 0.00 33.32 5.36
6642 7646 6.844097 TCATATAGTATCATTACGTGCCCA 57.156 37.500 0.00 0.00 33.32 5.36
6643 7647 7.418337 TCATATAGTATCATTACGTGCCCAT 57.582 36.000 0.00 0.00 33.32 4.00
6644 7648 7.264947 TCATATAGTATCATTACGTGCCCATG 58.735 38.462 0.00 0.00 33.32 3.66
6645 7649 5.738619 ATAGTATCATTACGTGCCCATGA 57.261 39.130 0.00 0.99 33.32 3.07
6646 7650 4.623932 AGTATCATTACGTGCCCATGAT 57.376 40.909 14.77 14.77 40.16 2.45
6647 7651 5.738619 AGTATCATTACGTGCCCATGATA 57.261 39.130 13.37 13.37 38.38 2.15
6648 7652 6.299805 AGTATCATTACGTGCCCATGATAT 57.700 37.500 17.43 9.29 40.40 1.63
6649 7653 6.711277 AGTATCATTACGTGCCCATGATATT 58.289 36.000 17.43 13.36 40.40 1.28
6650 7654 7.847096 AGTATCATTACGTGCCCATGATATTA 58.153 34.615 17.43 3.47 40.40 0.98
6651 7655 6.985188 ATCATTACGTGCCCATGATATTAC 57.015 37.500 0.00 0.00 36.15 1.89
6652 7656 5.242434 TCATTACGTGCCCATGATATTACC 58.758 41.667 0.00 0.00 0.00 2.85
6653 7657 4.967084 TTACGTGCCCATGATATTACCT 57.033 40.909 0.00 0.00 0.00 3.08
6654 7658 3.402628 ACGTGCCCATGATATTACCTC 57.597 47.619 0.00 0.00 0.00 3.85
6655 7659 2.038557 ACGTGCCCATGATATTACCTCC 59.961 50.000 0.00 0.00 0.00 4.30
6656 7660 2.615493 CGTGCCCATGATATTACCTCCC 60.615 54.545 0.00 0.00 0.00 4.30
6657 7661 1.992557 TGCCCATGATATTACCTCCCC 59.007 52.381 0.00 0.00 0.00 4.81
6658 7662 1.992557 GCCCATGATATTACCTCCCCA 59.007 52.381 0.00 0.00 0.00 4.96
6659 7663 2.025887 GCCCATGATATTACCTCCCCAG 60.026 54.545 0.00 0.00 0.00 4.45
6660 7664 3.260205 CCCATGATATTACCTCCCCAGT 58.740 50.000 0.00 0.00 0.00 4.00
6661 7665 3.657727 CCCATGATATTACCTCCCCAGTT 59.342 47.826 0.00 0.00 0.00 3.16
6662 7666 4.263506 CCCATGATATTACCTCCCCAGTTC 60.264 50.000 0.00 0.00 0.00 3.01
6663 7667 4.350816 CCATGATATTACCTCCCCAGTTCA 59.649 45.833 0.00 0.00 0.00 3.18
6664 7668 5.014544 CCATGATATTACCTCCCCAGTTCAT 59.985 44.000 0.00 0.00 0.00 2.57
6665 7669 6.215431 CCATGATATTACCTCCCCAGTTCATA 59.785 42.308 0.00 0.00 0.00 2.15
6666 7670 6.935240 TGATATTACCTCCCCAGTTCATAG 57.065 41.667 0.00 0.00 0.00 2.23
6667 7671 6.390504 TGATATTACCTCCCCAGTTCATAGT 58.609 40.000 0.00 0.00 0.00 2.12
6716 7720 9.886132 AATAAGTTGTGGTTGTTATCTACTAGG 57.114 33.333 0.00 0.00 0.00 3.02
6717 7721 7.549147 AAGTTGTGGTTGTTATCTACTAGGA 57.451 36.000 0.00 0.00 0.00 2.94
6718 7722 7.171630 AGTTGTGGTTGTTATCTACTAGGAG 57.828 40.000 0.00 0.00 0.00 3.69
6719 7723 6.724905 AGTTGTGGTTGTTATCTACTAGGAGT 59.275 38.462 0.78 0.00 0.00 3.85
6720 7724 7.892241 AGTTGTGGTTGTTATCTACTAGGAGTA 59.108 37.037 0.78 0.00 0.00 2.59
6721 7725 7.636150 TGTGGTTGTTATCTACTAGGAGTAC 57.364 40.000 0.78 0.14 0.00 2.73
6722 7726 7.408543 TGTGGTTGTTATCTACTAGGAGTACT 58.591 38.462 0.78 0.00 0.00 2.73
6724 7728 8.404765 GTGGTTGTTATCTACTAGGAGTACTTC 58.595 40.741 0.78 0.00 0.00 3.01
6725 7729 8.334734 TGGTTGTTATCTACTAGGAGTACTTCT 58.665 37.037 9.15 9.15 0.00 2.85
6726 7730 9.187996 GGTTGTTATCTACTAGGAGTACTTCTT 57.812 37.037 9.53 0.00 0.00 2.52
6729 7733 9.107177 TGTTATCTACTAGGAGTACTTCTTTCG 57.893 37.037 9.53 1.25 0.00 3.46
6730 7734 9.108284 GTTATCTACTAGGAGTACTTCTTTCGT 57.892 37.037 9.53 7.28 0.00 3.85
6733 7737 5.883503 ACTAGGAGTACTTCTTTCGTCTG 57.116 43.478 9.53 0.00 0.00 3.51
6735 7739 6.002704 ACTAGGAGTACTTCTTTCGTCTGAA 58.997 40.000 9.53 0.00 0.00 3.02
6736 7740 5.786264 AGGAGTACTTCTTTCGTCTGAAA 57.214 39.130 0.00 0.00 41.69 2.69
6737 7741 6.158023 AGGAGTACTTCTTTCGTCTGAAAA 57.842 37.500 0.00 0.00 43.21 2.29
6738 7742 6.760291 AGGAGTACTTCTTTCGTCTGAAAAT 58.240 36.000 0.00 0.00 43.21 1.82
6741 7745 7.813627 GGAGTACTTCTTTCGTCTGAAAATACT 59.186 37.037 0.00 0.00 43.21 2.12
6742 7746 9.194271 GAGTACTTCTTTCGTCTGAAAATACTT 57.806 33.333 0.00 0.00 43.21 2.24
6743 7747 8.979574 AGTACTTCTTTCGTCTGAAAATACTTG 58.020 33.333 0.00 0.00 43.21 3.16
6744 7748 7.787725 ACTTCTTTCGTCTGAAAATACTTGT 57.212 32.000 0.00 0.00 43.21 3.16
6745 7749 7.852516 ACTTCTTTCGTCTGAAAATACTTGTC 58.147 34.615 0.00 0.00 43.21 3.18
6746 7750 7.494625 ACTTCTTTCGTCTGAAAATACTTGTCA 59.505 33.333 0.00 0.00 43.21 3.58
6748 7752 8.018677 TCTTTCGTCTGAAAATACTTGTCATC 57.981 34.615 0.00 0.00 43.21 2.92
6751 7755 7.722795 TCGTCTGAAAATACTTGTCATCAAA 57.277 32.000 0.00 0.00 32.87 2.69
6752 7756 8.148807 TCGTCTGAAAATACTTGTCATCAAAA 57.851 30.769 0.00 0.00 32.87 2.44
6755 7759 9.897744 GTCTGAAAATACTTGTCATCAAAATGA 57.102 29.630 0.00 0.00 39.63 2.57
6765 7769 8.869109 ACTTGTCATCAAAATGATAAAAAGGGA 58.131 29.630 0.00 0.00 43.62 4.20
6767 7771 9.656040 TTGTCATCAAAATGATAAAAAGGGATG 57.344 29.630 0.00 0.00 43.62 3.51
6768 7772 8.814931 TGTCATCAAAATGATAAAAAGGGATGT 58.185 29.630 0.00 0.00 43.62 3.06
6840 7844 7.317722 ACATCCCTTAGTTTAGATACATCCC 57.682 40.000 0.00 0.00 0.00 3.85
6841 7845 7.082972 ACATCCCTTAGTTTAGATACATCCCT 58.917 38.462 0.00 0.00 0.00 4.20
6842 7846 7.572861 ACATCCCTTAGTTTAGATACATCCCTT 59.427 37.037 0.00 0.00 0.00 3.95
6843 7847 8.440771 CATCCCTTAGTTTAGATACATCCCTTT 58.559 37.037 0.00 0.00 0.00 3.11
6844 7848 8.401955 TCCCTTAGTTTAGATACATCCCTTTT 57.598 34.615 0.00 0.00 0.00 2.27
6845 7849 8.842764 TCCCTTAGTTTAGATACATCCCTTTTT 58.157 33.333 0.00 0.00 0.00 1.94
6860 7864 9.657419 ACATCCCTTTTTATTCATTTTGATGAC 57.343 29.630 0.00 0.00 32.39 3.06
6861 7865 9.656040 CATCCCTTTTTATTCATTTTGATGACA 57.344 29.630 0.00 0.00 0.00 3.58
6863 7867 9.709495 TCCCTTTTTATTCATTTTGATGACAAG 57.291 29.630 0.00 0.00 37.32 3.16
6864 7868 9.492973 CCCTTTTTATTCATTTTGATGACAAGT 57.507 29.630 0.00 0.00 37.32 3.16
6873 7877 9.958234 TTCATTTTGATGACAAGTATTTTCGAA 57.042 25.926 0.00 0.00 37.32 3.71
6874 7878 9.393249 TCATTTTGATGACAAGTATTTTCGAAC 57.607 29.630 0.00 0.00 37.32 3.95
6875 7879 7.830217 TTTTGATGACAAGTATTTTCGAACG 57.170 32.000 0.00 0.00 37.32 3.95
6876 7880 6.772770 TTGATGACAAGTATTTTCGAACGA 57.227 33.333 0.00 0.00 0.00 3.85
6877 7881 6.772770 TGATGACAAGTATTTTCGAACGAA 57.227 33.333 0.00 5.53 0.00 3.85
6878 7882 6.817396 TGATGACAAGTATTTTCGAACGAAG 58.183 36.000 9.46 0.23 35.38 3.79
6879 7883 5.585500 TGACAAGTATTTTCGAACGAAGG 57.415 39.130 9.46 0.00 35.38 3.46
6880 7884 4.449743 TGACAAGTATTTTCGAACGAAGGG 59.550 41.667 9.46 0.00 35.38 3.95
6881 7885 4.634199 ACAAGTATTTTCGAACGAAGGGA 58.366 39.130 9.46 1.97 35.38 4.20
6882 7886 4.689345 ACAAGTATTTTCGAACGAAGGGAG 59.311 41.667 9.46 1.94 35.38 4.30
6885 7889 6.218108 AGTATTTTCGAACGAAGGGAGTAT 57.782 37.500 9.46 2.44 35.38 2.12
6910 7914 6.322456 TCTCCGTCTAGATTCACTCATTTCAT 59.678 38.462 0.00 0.00 0.00 2.57
6912 7916 6.980978 TCCGTCTAGATTCACTCATTTCATTC 59.019 38.462 0.00 0.00 0.00 2.67
6980 7984 8.836268 ATTTTTGTTCAACATGCTATGATGTT 57.164 26.923 0.00 0.00 45.51 2.71
7003 8007 9.754382 TGTTGTATTATATTACTTTCTCCGTCC 57.246 33.333 6.40 0.00 0.00 4.79
7004 8008 8.909671 GTTGTATTATATTACTTTCTCCGTCCG 58.090 37.037 6.40 0.00 0.00 4.79
7005 8009 8.394971 TGTATTATATTACTTTCTCCGTCCGA 57.605 34.615 6.40 0.00 0.00 4.55
7006 8010 8.849168 TGTATTATATTACTTTCTCCGTCCGAA 58.151 33.333 6.40 0.00 0.00 4.30
7007 8011 9.683069 GTATTATATTACTTTCTCCGTCCGAAA 57.317 33.333 0.00 0.00 0.00 3.46
7009 8013 9.774413 ATTATATTACTTTCTCCGTCCGAAATT 57.226 29.630 0.00 0.00 30.75 1.82
7011 8015 6.898912 ATTACTTTCTCCGTCCGAAATTAC 57.101 37.500 0.00 0.00 30.75 1.89
7012 8016 4.532314 ACTTTCTCCGTCCGAAATTACT 57.468 40.909 0.00 0.00 30.75 2.24
7013 8017 4.891260 ACTTTCTCCGTCCGAAATTACTT 58.109 39.130 0.00 0.00 30.75 2.24
7014 8018 4.689345 ACTTTCTCCGTCCGAAATTACTTG 59.311 41.667 0.00 0.00 30.75 3.16
7015 8019 3.947910 TCTCCGTCCGAAATTACTTGT 57.052 42.857 0.00 0.00 0.00 3.16
7016 8020 4.261578 TCTCCGTCCGAAATTACTTGTT 57.738 40.909 0.00 0.00 0.00 2.83
7017 8021 4.634199 TCTCCGTCCGAAATTACTTGTTT 58.366 39.130 0.00 0.00 0.00 2.83
7018 8022 5.058490 TCTCCGTCCGAAATTACTTGTTTT 58.942 37.500 0.00 0.00 0.00 2.43
7019 8023 6.222389 TCTCCGTCCGAAATTACTTGTTTTA 58.778 36.000 0.00 0.00 0.00 1.52
7020 8024 6.366877 TCTCCGTCCGAAATTACTTGTTTTAG 59.633 38.462 0.00 0.00 0.00 1.85
7021 8025 6.222389 TCCGTCCGAAATTACTTGTTTTAGA 58.778 36.000 0.00 0.00 0.00 2.10
7022 8026 6.705381 TCCGTCCGAAATTACTTGTTTTAGAA 59.295 34.615 0.00 0.00 0.00 2.10
7023 8027 7.226325 TCCGTCCGAAATTACTTGTTTTAGAAA 59.774 33.333 0.00 0.00 0.00 2.52
7024 8028 8.019094 CCGTCCGAAATTACTTGTTTTAGAAAT 58.981 33.333 0.00 0.00 0.00 2.17
7080 8084 7.928307 ATATCCATTTCTATCCATTTCCACG 57.072 36.000 0.00 0.00 0.00 4.94
7081 8085 5.366482 TCCATTTCTATCCATTTCCACGA 57.634 39.130 0.00 0.00 0.00 4.35
7082 8086 5.123227 TCCATTTCTATCCATTTCCACGAC 58.877 41.667 0.00 0.00 0.00 4.34
7083 8087 4.881273 CCATTTCTATCCATTTCCACGACA 59.119 41.667 0.00 0.00 0.00 4.35
7084 8088 5.356751 CCATTTCTATCCATTTCCACGACAA 59.643 40.000 0.00 0.00 0.00 3.18
7085 8089 6.458751 CCATTTCTATCCATTTCCACGACAAG 60.459 42.308 0.00 0.00 0.00 3.16
7086 8090 4.819105 TCTATCCATTTCCACGACAAGT 57.181 40.909 0.00 0.00 0.00 3.16
7087 8091 5.925506 TCTATCCATTTCCACGACAAGTA 57.074 39.130 0.00 0.00 0.00 2.24
7088 8092 6.288941 TCTATCCATTTCCACGACAAGTAA 57.711 37.500 0.00 0.00 0.00 2.24
7089 8093 6.884832 TCTATCCATTTCCACGACAAGTAAT 58.115 36.000 0.00 0.00 0.00 1.89
7090 8094 7.335627 TCTATCCATTTCCACGACAAGTAATT 58.664 34.615 0.00 0.00 0.00 1.40
7091 8095 6.834168 ATCCATTTCCACGACAAGTAATTT 57.166 33.333 0.00 0.00 0.00 1.82
7092 8096 6.249035 TCCATTTCCACGACAAGTAATTTC 57.751 37.500 0.00 0.00 0.00 2.17
7093 8097 5.086058 CCATTTCCACGACAAGTAATTTCG 58.914 41.667 0.00 6.13 38.73 3.46
7094 8098 4.735662 TTTCCACGACAAGTAATTTCGG 57.264 40.909 10.55 0.00 37.07 4.30
7095 8099 3.663995 TCCACGACAAGTAATTTCGGA 57.336 42.857 10.55 0.00 37.07 4.55
7096 8100 3.319755 TCCACGACAAGTAATTTCGGAC 58.680 45.455 10.55 0.00 37.07 4.79
7097 8101 2.091588 CCACGACAAGTAATTTCGGACG 59.908 50.000 10.55 0.00 37.07 4.79
7098 8102 2.091588 CACGACAAGTAATTTCGGACGG 59.908 50.000 10.55 0.00 37.07 4.79
7099 8103 2.030007 ACGACAAGTAATTTCGGACGGA 60.030 45.455 10.55 0.00 37.07 4.69
7100 8104 2.597305 CGACAAGTAATTTCGGACGGAG 59.403 50.000 0.00 0.00 0.00 4.63
7101 8105 2.928116 GACAAGTAATTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
7102 8106 2.277084 CAAGTAATTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
7103 8107 1.856629 AGTAATTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
7104 8108 1.755380 AGTAATTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
7105 8109 1.479730 GTAATTTCGGACGGAGGGAGT 59.520 52.381 0.00 0.00 0.00 3.85
7106 8110 1.856629 AATTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
7107 8111 2.083628 ATTTCGGACGGAGGGAGTAT 57.916 50.000 0.00 0.00 0.00 2.12
7200 10341 6.472016 TGCATTGTAAGAGGTCTAATTGTGA 58.528 36.000 0.00 0.00 0.00 3.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 9.941325 ATAACCAATTGAAAATTATGTGCAGAA 57.059 25.926 7.12 0.00 0.00 3.02
17 18 9.153721 ACATAACCAATTGAAAATTATGTGCAG 57.846 29.630 22.62 8.80 42.18 4.41
45 46 4.080243 TGGAATAACCGGTTGTCATATGGT 60.080 41.667 30.08 5.95 42.61 3.55
46 47 4.456535 TGGAATAACCGGTTGTCATATGG 58.543 43.478 30.08 0.00 42.61 2.74
83 84 9.838339 ATTGAGACTTCAAGTTCTCTCTAAAAA 57.162 29.630 14.38 4.33 45.89 1.94
108 109 6.659242 AGATGTGTCTCGGGAATTTGTTTTAT 59.341 34.615 0.00 0.00 0.00 1.40
168 169 4.910195 TGTCTTCCAAGCACATCTATGTT 58.090 39.130 0.00 0.00 39.39 2.71
170 171 4.880120 ACATGTCTTCCAAGCACATCTATG 59.120 41.667 0.00 0.00 30.08 2.23
172 173 4.558226 ACATGTCTTCCAAGCACATCTA 57.442 40.909 0.00 0.00 30.08 1.98
184 185 7.194607 TCATGAAGTCAAGAAACATGTCTTC 57.805 36.000 12.08 12.08 40.79 2.87
217 241 6.112734 TGCCACTGAGTATTCAATTAATCGT 58.887 36.000 0.00 0.00 31.69 3.73
222 246 8.849168 CCAATTATGCCACTGAGTATTCAATTA 58.151 33.333 0.00 0.00 31.69 1.40
248 272 4.901868 AGATCTCTCGTGGTCTATCCTAC 58.098 47.826 0.00 0.00 37.07 3.18
259 283 3.857549 TTGGACTCAAGATCTCTCGTG 57.142 47.619 0.00 0.00 32.80 4.35
303 327 3.492337 ACTCGGCAACCAAGGAAATTTA 58.508 40.909 0.00 0.00 0.00 1.40
305 329 1.995376 ACTCGGCAACCAAGGAAATT 58.005 45.000 0.00 0.00 0.00 1.82
311 335 2.004583 TCGATTACTCGGCAACCAAG 57.995 50.000 2.41 0.00 45.10 3.61
320 344 4.840401 TTGCAGAAATGTCGATTACTCG 57.160 40.909 0.00 0.00 46.41 4.18
385 409 6.144854 GCAAGCGCATCAAGATTCATTAATA 58.855 36.000 11.47 0.00 38.36 0.98
395 419 1.233950 TTTCCGCAAGCGCATCAAGA 61.234 50.000 11.47 0.00 38.40 3.02
430 454 6.984474 TCAGACTGAAAATAGACTTTTGACGT 59.016 34.615 1.64 0.00 0.00 4.34
435 459 7.442666 GTGGAGTCAGACTGAAAATAGACTTTT 59.557 37.037 8.15 0.00 36.56 2.27
442 466 6.419484 TGAAGTGGAGTCAGACTGAAAATA 57.581 37.500 8.15 0.00 0.00 1.40
447 471 4.963318 AAATGAAGTGGAGTCAGACTGA 57.037 40.909 8.15 0.00 0.00 3.41
453 477 3.067106 GAGCGAAAATGAAGTGGAGTCA 58.933 45.455 0.00 0.00 0.00 3.41
471 495 2.677836 TGTATGCAGATTGTTTCGGAGC 59.322 45.455 0.00 0.00 0.00 4.70
485 509 3.814625 TGGAGCGGATAATTTGTATGCA 58.185 40.909 0.00 0.00 0.00 3.96
486 510 5.376854 AATGGAGCGGATAATTTGTATGC 57.623 39.130 0.00 0.00 0.00 3.14
487 511 6.969366 TGAAATGGAGCGGATAATTTGTATG 58.031 36.000 0.00 0.00 0.00 2.39
526 550 6.462909 GCTTTTCCCAATCCTTAACCATATGG 60.463 42.308 20.68 20.68 42.17 2.74
563 668 6.045072 ACCACTTGTAAACGGATTAGATGA 57.955 37.500 0.00 0.00 0.00 2.92
572 677 3.747529 ACGGAAATACCACTTGTAAACGG 59.252 43.478 0.00 0.00 38.90 4.44
589 694 8.967918 CAGACCCTATATATTAATCTGACGGAA 58.032 37.037 0.00 0.00 35.22 4.30
612 717 9.278978 GTCATATCTAGATGTGTCTTAGACAGA 57.721 37.037 23.88 15.21 43.57 3.41
613 718 9.061435 TGTCATATCTAGATGTGTCTTAGACAG 57.939 37.037 23.88 3.05 43.57 3.51
614 719 8.980481 TGTCATATCTAGATGTGTCTTAGACA 57.020 34.615 23.88 17.81 40.50 3.41
642 747 9.593565 TGAAGATCAGGTTAGATGTGATATAGT 57.406 33.333 0.00 0.00 30.93 2.12
643 748 9.853555 GTGAAGATCAGGTTAGATGTGATATAG 57.146 37.037 0.00 0.00 30.93 1.31
644 749 9.593565 AGTGAAGATCAGGTTAGATGTGATATA 57.406 33.333 0.00 0.00 30.93 0.86
645 750 8.366401 CAGTGAAGATCAGGTTAGATGTGATAT 58.634 37.037 0.00 0.00 30.93 1.63
646 751 7.343057 ACAGTGAAGATCAGGTTAGATGTGATA 59.657 37.037 0.00 0.00 30.93 2.15
647 752 6.155910 ACAGTGAAGATCAGGTTAGATGTGAT 59.844 38.462 0.00 0.00 33.53 3.06
648 753 5.481824 ACAGTGAAGATCAGGTTAGATGTGA 59.518 40.000 0.00 0.00 0.00 3.58
649 754 5.579904 CACAGTGAAGATCAGGTTAGATGTG 59.420 44.000 0.00 0.00 0.00 3.21
650 755 5.247110 ACACAGTGAAGATCAGGTTAGATGT 59.753 40.000 7.81 0.00 0.00 3.06
651 756 5.728471 ACACAGTGAAGATCAGGTTAGATG 58.272 41.667 7.81 0.00 0.00 2.90
652 757 6.365970 AACACAGTGAAGATCAGGTTAGAT 57.634 37.500 7.81 0.00 0.00 1.98
653 758 5.808366 AACACAGTGAAGATCAGGTTAGA 57.192 39.130 7.81 0.00 0.00 2.10
654 759 5.760253 ACAAACACAGTGAAGATCAGGTTAG 59.240 40.000 7.81 0.00 0.00 2.34
655 760 5.527214 CACAAACACAGTGAAGATCAGGTTA 59.473 40.000 7.81 0.00 39.30 2.85
656 761 4.336433 CACAAACACAGTGAAGATCAGGTT 59.664 41.667 7.81 0.00 39.30 3.50
657 762 3.879295 CACAAACACAGTGAAGATCAGGT 59.121 43.478 7.81 0.00 39.30 4.00
658 763 3.251729 CCACAAACACAGTGAAGATCAGG 59.748 47.826 7.81 0.00 39.30 3.86
659 764 3.879295 ACCACAAACACAGTGAAGATCAG 59.121 43.478 7.81 0.00 39.30 2.90
660 765 3.876914 GACCACAAACACAGTGAAGATCA 59.123 43.478 7.81 0.00 39.30 2.92
661 766 4.130118 AGACCACAAACACAGTGAAGATC 58.870 43.478 7.81 0.00 39.30 2.75
662 767 4.156455 AGACCACAAACACAGTGAAGAT 57.844 40.909 7.81 0.00 39.30 2.40
663 768 3.627395 AGACCACAAACACAGTGAAGA 57.373 42.857 7.81 0.00 39.30 2.87
664 769 6.377327 AAATAGACCACAAACACAGTGAAG 57.623 37.500 7.81 0.00 39.30 3.02
665 770 6.767524 AAAATAGACCACAAACACAGTGAA 57.232 33.333 7.81 0.00 39.30 3.18
666 771 6.767524 AAAAATAGACCACAAACACAGTGA 57.232 33.333 7.81 0.00 39.30 3.41
710 815 9.513906 TCTCATAAATACACATCAACAAGGAAA 57.486 29.630 0.00 0.00 0.00 3.13
711 816 9.166173 CTCTCATAAATACACATCAACAAGGAA 57.834 33.333 0.00 0.00 0.00 3.36
712 817 8.321353 ACTCTCATAAATACACATCAACAAGGA 58.679 33.333 0.00 0.00 0.00 3.36
713 818 8.498054 ACTCTCATAAATACACATCAACAAGG 57.502 34.615 0.00 0.00 0.00 3.61
727 832 9.553064 GGATGTCACATCTAAACTCTCATAAAT 57.447 33.333 17.46 0.00 0.00 1.40
728 833 8.762645 AGGATGTCACATCTAAACTCTCATAAA 58.237 33.333 17.46 0.00 0.00 1.40
729 834 8.311395 AGGATGTCACATCTAAACTCTCATAA 57.689 34.615 17.46 0.00 0.00 1.90
730 835 7.904558 AGGATGTCACATCTAAACTCTCATA 57.095 36.000 17.46 0.00 0.00 2.15
731 836 6.805016 AGGATGTCACATCTAAACTCTCAT 57.195 37.500 17.46 0.00 0.00 2.90
732 837 6.611613 AAGGATGTCACATCTAAACTCTCA 57.388 37.500 17.46 0.00 0.00 3.27
733 838 8.001881 TCTAAGGATGTCACATCTAAACTCTC 57.998 38.462 17.46 0.00 0.00 3.20
734 839 7.962995 TCTAAGGATGTCACATCTAAACTCT 57.037 36.000 17.46 2.09 0.00 3.24
735 840 9.436957 TTTTCTAAGGATGTCACATCTAAACTC 57.563 33.333 17.46 0.00 0.00 3.01
736 841 9.220767 GTTTTCTAAGGATGTCACATCTAAACT 57.779 33.333 17.46 3.19 0.00 2.66
737 842 8.999431 TGTTTTCTAAGGATGTCACATCTAAAC 58.001 33.333 17.46 15.71 0.00 2.01
738 843 9.739276 ATGTTTTCTAAGGATGTCACATCTAAA 57.261 29.630 17.46 7.88 0.00 1.85
739 844 9.383519 GATGTTTTCTAAGGATGTCACATCTAA 57.616 33.333 17.46 2.83 37.41 2.10
740 845 8.762645 AGATGTTTTCTAAGGATGTCACATCTA 58.237 33.333 17.46 2.37 44.89 1.98
741 846 7.628234 AGATGTTTTCTAAGGATGTCACATCT 58.372 34.615 17.46 1.18 42.98 2.90
742 847 7.856145 AGATGTTTTCTAAGGATGTCACATC 57.144 36.000 9.53 9.53 39.62 3.06
743 848 8.762645 TCTAGATGTTTTCTAAGGATGTCACAT 58.237 33.333 0.00 0.00 36.50 3.21
744 849 8.134202 TCTAGATGTTTTCTAAGGATGTCACA 57.866 34.615 0.00 0.00 36.50 3.58
745 850 9.039870 CATCTAGATGTTTTCTAAGGATGTCAC 57.960 37.037 22.42 0.00 36.15 3.67
808 914 8.606602 AGTACGGATGTAAACGGATTAATTTTC 58.393 33.333 0.00 0.00 30.94 2.29
841 950 0.978907 TCTGATCTTGCAGCACCTCA 59.021 50.000 0.00 0.00 35.86 3.86
842 951 1.367659 GTCTGATCTTGCAGCACCTC 58.632 55.000 0.00 0.00 35.86 3.85
913 1022 2.607750 GGGTCTCTGGCCTGGTCA 60.608 66.667 10.07 0.00 0.00 4.02
1064 1173 0.393537 GCAGGGAGATCAGGTGGTTG 60.394 60.000 0.00 0.00 0.00 3.77
1201 1310 3.005554 CCAGATCAAACGAGCACAAGAT 58.994 45.455 0.00 0.00 0.00 2.40
1320 1429 1.169661 AATCAAAACGCGACAGCCCA 61.170 50.000 15.93 0.00 41.18 5.36
1327 1436 1.060553 GCGAGATCAATCAAAACGCGA 59.939 47.619 15.93 0.00 35.78 5.87
1345 1454 4.265556 CGAACTAATCTACCACAGAAAGCG 59.734 45.833 0.00 0.00 36.67 4.68
1375 1484 1.489824 CAACACTAACCGAACGGCG 59.510 57.895 13.32 4.80 39.32 6.46
1382 1491 2.744709 CCCCGCCAACACTAACCG 60.745 66.667 0.00 0.00 0.00 4.44
1431 1540 5.182487 ACCAACCCAGAAATCAAAACAAAC 58.818 37.500 0.00 0.00 0.00 2.93
1455 1564 4.202010 ACTGATGCCCCGAAAATAAAATCG 60.202 41.667 0.00 0.00 38.74 3.34
1461 1570 6.042781 ACTCTATTACTGATGCCCCGAAAATA 59.957 38.462 0.00 0.00 0.00 1.40
1597 1706 2.401766 GGACGGCTGCATCAACCAG 61.402 63.158 0.50 0.00 0.00 4.00
1625 1734 2.124122 GGTTGCTTTTGGTTAACGCTG 58.876 47.619 0.00 0.00 32.56 5.18
1654 1763 6.756542 GCACACAGAATTTTGGTTAAAGTCTT 59.243 34.615 0.57 0.00 45.97 3.01
1671 1780 2.355007 CCAGTGTATCCATGCACACAGA 60.355 50.000 19.37 0.00 45.99 3.41
1763 1872 9.661954 ACCCATATAGAGAATAGAGACAAAAGA 57.338 33.333 0.00 0.00 0.00 2.52
1767 1876 9.742144 GAGTACCCATATAGAGAATAGAGACAA 57.258 37.037 0.00 0.00 0.00 3.18
1993 2102 1.603455 ACGGTGATGCCTTTGGTGG 60.603 57.895 0.00 0.00 34.25 4.61
2774 3690 9.557061 TGACAGTACATAAAGATCTATAGACGT 57.443 33.333 4.10 0.00 0.00 4.34
3109 4027 2.544277 GCTTGCTGCTTCAACACAATCA 60.544 45.455 0.00 0.00 38.95 2.57
3234 4152 6.985645 TGAAATCAACAAAACTGAAGAATGGG 59.014 34.615 0.00 0.00 0.00 4.00
3376 4294 8.952278 GTAGTACAATGTGGTGGAAATAAATGA 58.048 33.333 0.00 0.00 0.00 2.57
3413 4331 2.194201 AAAGTACCACATCCGGTTGG 57.806 50.000 16.70 15.95 40.67 3.77
3527 4445 9.371136 TGAAAATGCTCTAGACAAAGTATACAG 57.629 33.333 5.50 0.00 0.00 2.74
3529 4447 9.372369 AGTGAAAATGCTCTAGACAAAGTATAC 57.628 33.333 0.00 0.00 0.00 1.47
3533 4451 6.058183 ACAGTGAAAATGCTCTAGACAAAGT 58.942 36.000 0.00 0.00 33.50 2.66
3628 4546 4.377841 CCACGAAGCATCTTCAACTCTTTC 60.378 45.833 7.27 0.00 0.00 2.62
3805 4723 5.541845 CATCTCGACTGGATGGCTATTTAA 58.458 41.667 5.46 0.00 37.50 1.52
3806 4724 5.139435 CATCTCGACTGGATGGCTATTTA 57.861 43.478 5.46 0.00 37.50 1.40
3807 4725 4.000331 CATCTCGACTGGATGGCTATTT 58.000 45.455 5.46 0.00 37.50 1.40
4299 5217 3.782523 ACATTCCAGGAATAGAAGAGCCA 59.217 43.478 14.80 0.00 30.44 4.75
5432 6350 7.067496 TGGCCACAGGAAAACAATTAAATAA 57.933 32.000 0.00 0.00 0.00 1.40
5476 6394 3.119009 TGGGACGGAGGGAGTAATTTA 57.881 47.619 0.00 0.00 0.00 1.40
5481 6399 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
5482 6400 1.004394 GAATTTTGGGACGGAGGGAGT 59.996 52.381 0.00 0.00 0.00 3.85
5483 6401 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
5484 6402 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
5485 6403 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
5486 6404 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
5487 6405 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
5488 6406 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
5489 6407 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
5490 6408 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
5491 6409 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
5492 6410 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
5493 6411 9.546428 AAACAAATCTAAGACAAGAATTTTGGG 57.454 29.630 0.00 0.00 33.04 4.12
5501 6419 9.268268 ACGTATTGAAACAAATCTAAGACAAGA 57.732 29.630 0.00 0.00 0.00 3.02
5531 6449 9.962783 GTCTCAATACGGATGTATTAAGTACTT 57.037 33.333 13.68 13.68 46.91 2.24
5532 6450 9.128404 TGTCTCAATACGGATGTATTAAGTACT 57.872 33.333 0.00 0.00 46.91 2.73
5533 6451 9.740239 TTGTCTCAATACGGATGTATTAAGTAC 57.260 33.333 0.74 0.00 46.91 2.73
5535 6453 9.832445 ATTTGTCTCAATACGGATGTATTAAGT 57.168 29.630 0.74 0.00 46.91 2.24
5540 6458 9.698309 CTTAGATTTGTCTCAATACGGATGTAT 57.302 33.333 0.00 0.00 43.14 2.29
5541 6459 8.909923 TCTTAGATTTGTCTCAATACGGATGTA 58.090 33.333 0.00 0.00 34.45 2.29
5542 6460 7.707035 GTCTTAGATTTGTCTCAATACGGATGT 59.293 37.037 0.00 0.00 0.00 3.06
5543 6461 7.706607 TGTCTTAGATTTGTCTCAATACGGATG 59.293 37.037 0.00 0.00 0.00 3.51
5544 6462 7.782049 TGTCTTAGATTTGTCTCAATACGGAT 58.218 34.615 0.00 0.00 0.00 4.18
5545 6463 7.165460 TGTCTTAGATTTGTCTCAATACGGA 57.835 36.000 0.00 0.00 0.00 4.69
5546 6464 7.759886 TCTTGTCTTAGATTTGTCTCAATACGG 59.240 37.037 0.00 0.00 0.00 4.02
5547 6465 8.689251 TCTTGTCTTAGATTTGTCTCAATACG 57.311 34.615 0.00 0.00 0.00 3.06
5553 6471 9.617975 CCAAAATTCTTGTCTTAGATTTGTCTC 57.382 33.333 0.00 0.00 28.79 3.36
5554 6472 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
5555 6473 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
5556 6474 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
5557 6475 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
5558 6476 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
5559 6477 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
5560 6478 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
5561 6479 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
5562 6480 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
5563 6481 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
5564 6482 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
5565 6483 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
5566 6484 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
5567 6485 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
5568 6486 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
5569 6487 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
5570 6488 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
5571 6489 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
5572 6490 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
5573 6491 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
5574 6492 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
5575 6493 0.178926 TGTACTCCCTCCGTCCCAAA 60.179 55.000 0.00 0.00 0.00 3.28
5576 6494 0.042131 ATGTACTCCCTCCGTCCCAA 59.958 55.000 0.00 0.00 0.00 4.12
5577 6495 0.928505 TATGTACTCCCTCCGTCCCA 59.071 55.000 0.00 0.00 0.00 4.37
5578 6496 1.133544 ACTATGTACTCCCTCCGTCCC 60.134 57.143 0.00 0.00 0.00 4.46
5579 6497 2.361643 ACTATGTACTCCCTCCGTCC 57.638 55.000 0.00 0.00 0.00 4.79
5580 6498 4.396522 ACATACTATGTACTCCCTCCGTC 58.603 47.826 0.00 0.00 42.78 4.79
5581 6499 4.104420 AGACATACTATGTACTCCCTCCGT 59.896 45.833 1.45 0.00 45.03 4.69
5582 6500 4.456222 CAGACATACTATGTACTCCCTCCG 59.544 50.000 1.45 0.00 45.03 4.63
5583 6501 4.218852 GCAGACATACTATGTACTCCCTCC 59.781 50.000 1.45 0.00 45.03 4.30
5584 6502 4.827835 TGCAGACATACTATGTACTCCCTC 59.172 45.833 1.45 0.00 45.03 4.30
5585 6503 4.804597 TGCAGACATACTATGTACTCCCT 58.195 43.478 1.45 0.00 45.03 4.20
5586 6504 5.531122 TTGCAGACATACTATGTACTCCC 57.469 43.478 1.45 0.00 45.03 4.30
5587 6505 6.986817 ACAATTGCAGACATACTATGTACTCC 59.013 38.462 5.05 0.00 45.03 3.85
5588 6506 8.425577 AACAATTGCAGACATACTATGTACTC 57.574 34.615 5.05 0.00 45.03 2.59
5589 6507 8.260818 AGAACAATTGCAGACATACTATGTACT 58.739 33.333 5.05 0.00 45.03 2.73
5590 6508 8.425577 AGAACAATTGCAGACATACTATGTAC 57.574 34.615 5.05 0.00 45.03 2.90
5725 6644 9.902684 ATAATGTCCTCATATTCTTCATCATCC 57.097 33.333 0.00 0.00 33.49 3.51
5845 6815 2.203070 CCCGACATGGCAGGCTAC 60.203 66.667 0.00 0.00 35.87 3.58
5920 6890 6.961554 GCGTCAAACAAAGTATTAGGAATGAG 59.038 38.462 0.00 0.00 0.00 2.90
6030 7000 2.846193 TGAACCTCACTAAACAGTGCC 58.154 47.619 0.00 0.00 39.49 5.01
6167 7137 2.888414 GTTTCCACCGAATTTCCTTCCA 59.112 45.455 0.00 0.00 0.00 3.53
6288 7258 6.223138 TGCTGTAAATCGAACAAACTACAG 57.777 37.500 0.00 2.21 39.36 2.74
6467 7437 3.850122 AATCTTTCAAGGGCGCTAAAC 57.150 42.857 7.64 0.00 0.00 2.01
6494 7464 8.443176 AGGGTAAAGCTAAAGGTAAAGTTACTT 58.557 33.333 0.00 0.00 34.16 2.24
6591 7561 0.534873 GTGAGAGGTCCTGCTCTTCC 59.465 60.000 15.28 4.76 32.44 3.46
6596 7600 0.178950 TGACTGTGAGAGGTCCTGCT 60.179 55.000 0.00 0.00 0.00 4.24
6597 7601 0.037790 GTGACTGTGAGAGGTCCTGC 60.038 60.000 0.00 0.00 0.00 4.85
6598 7602 1.626686 AGTGACTGTGAGAGGTCCTG 58.373 55.000 0.00 0.00 0.00 3.86
6600 7604 3.357203 TGATAGTGACTGTGAGAGGTCC 58.643 50.000 0.00 0.00 0.00 4.46
6601 7605 6.892658 ATATGATAGTGACTGTGAGAGGTC 57.107 41.667 0.00 0.00 0.00 3.85
6602 7606 7.522542 ACTATATGATAGTGACTGTGAGAGGT 58.477 38.462 0.00 0.00 0.00 3.85
6614 7618 9.452065 GGCACGTAATGATACTATATGATAGTG 57.548 37.037 9.00 0.00 0.00 2.74
6615 7619 8.630917 GGGCACGTAATGATACTATATGATAGT 58.369 37.037 4.63 4.63 0.00 2.12
6616 7620 8.630037 TGGGCACGTAATGATACTATATGATAG 58.370 37.037 0.00 0.00 0.00 2.08
6618 7622 7.418337 TGGGCACGTAATGATACTATATGAT 57.582 36.000 0.00 0.00 0.00 2.45
6619 7623 6.844097 TGGGCACGTAATGATACTATATGA 57.156 37.500 0.00 0.00 0.00 2.15
6620 7624 7.264947 TCATGGGCACGTAATGATACTATATG 58.735 38.462 0.00 0.00 0.00 1.78
6621 7625 7.418337 TCATGGGCACGTAATGATACTATAT 57.582 36.000 0.00 0.00 0.00 0.86
6622 7626 6.844097 TCATGGGCACGTAATGATACTATA 57.156 37.500 0.00 0.00 0.00 1.31
6623 7627 5.738619 TCATGGGCACGTAATGATACTAT 57.261 39.130 0.00 0.00 0.00 2.12
6624 7628 5.738619 ATCATGGGCACGTAATGATACTA 57.261 39.130 11.38 0.00 38.85 1.82
6625 7629 4.623932 ATCATGGGCACGTAATGATACT 57.376 40.909 11.38 0.00 38.85 2.12
6626 7630 6.985188 AATATCATGGGCACGTAATGATAC 57.015 37.500 17.57 0.00 42.86 2.24
6627 7631 7.045416 GGTAATATCATGGGCACGTAATGATA 58.955 38.462 17.54 17.54 43.70 2.15
6628 7632 5.880332 GGTAATATCATGGGCACGTAATGAT 59.120 40.000 15.31 15.31 42.30 2.45
6629 7633 5.012664 AGGTAATATCATGGGCACGTAATGA 59.987 40.000 0.00 0.00 34.96 2.57
6631 7635 5.488341 GAGGTAATATCATGGGCACGTAAT 58.512 41.667 0.00 0.00 0.00 1.89
6633 7637 3.259876 GGAGGTAATATCATGGGCACGTA 59.740 47.826 0.00 0.00 0.00 3.57
6634 7638 2.038557 GGAGGTAATATCATGGGCACGT 59.961 50.000 0.00 0.00 0.00 4.49
6635 7639 2.615493 GGGAGGTAATATCATGGGCACG 60.615 54.545 0.00 0.00 0.00 5.34
6636 7640 2.290960 GGGGAGGTAATATCATGGGCAC 60.291 54.545 0.00 0.00 0.00 5.01
6637 7641 1.992557 GGGGAGGTAATATCATGGGCA 59.007 52.381 0.00 0.00 0.00 5.36
6638 7642 1.992557 TGGGGAGGTAATATCATGGGC 59.007 52.381 0.00 0.00 0.00 5.36
6639 7643 3.260205 ACTGGGGAGGTAATATCATGGG 58.740 50.000 0.00 0.00 0.00 4.00
6640 7644 4.350816 TGAACTGGGGAGGTAATATCATGG 59.649 45.833 0.00 0.00 0.00 3.66
6641 7645 5.567037 TGAACTGGGGAGGTAATATCATG 57.433 43.478 0.00 0.00 0.00 3.07
6642 7646 7.025620 ACTATGAACTGGGGAGGTAATATCAT 58.974 38.462 0.00 0.00 0.00 2.45
6643 7647 6.390504 ACTATGAACTGGGGAGGTAATATCA 58.609 40.000 0.00 0.00 0.00 2.15
6644 7648 6.936968 ACTATGAACTGGGGAGGTAATATC 57.063 41.667 0.00 0.00 0.00 1.63
6645 7649 8.184249 TGATACTATGAACTGGGGAGGTAATAT 58.816 37.037 0.00 0.00 0.00 1.28
6646 7650 7.541074 TGATACTATGAACTGGGGAGGTAATA 58.459 38.462 0.00 0.00 0.00 0.98
6647 7651 6.390504 TGATACTATGAACTGGGGAGGTAAT 58.609 40.000 0.00 0.00 0.00 1.89
6648 7652 5.784023 TGATACTATGAACTGGGGAGGTAA 58.216 41.667 0.00 0.00 0.00 2.85
6649 7653 5.412617 TGATACTATGAACTGGGGAGGTA 57.587 43.478 0.00 0.00 0.00 3.08
6650 7654 4.280789 TGATACTATGAACTGGGGAGGT 57.719 45.455 0.00 0.00 0.00 3.85
6651 7655 6.669591 TGATATGATACTATGAACTGGGGAGG 59.330 42.308 0.00 0.00 0.00 4.30
6652 7656 7.724490 TGATATGATACTATGAACTGGGGAG 57.276 40.000 0.00 0.00 0.00 4.30
6653 7657 8.685257 AATGATATGATACTATGAACTGGGGA 57.315 34.615 0.00 0.00 0.00 4.81
6654 7658 9.170734 CAAATGATATGATACTATGAACTGGGG 57.829 37.037 0.00 0.00 0.00 4.96
6655 7659 9.730705 ACAAATGATATGATACTATGAACTGGG 57.269 33.333 0.00 0.00 0.00 4.45
6715 7719 7.813627 AGTATTTTCAGACGAAAGAAGTACTCC 59.186 37.037 0.00 0.00 42.00 3.85
6716 7720 8.745464 AGTATTTTCAGACGAAAGAAGTACTC 57.255 34.615 0.00 0.00 42.00 2.59
6717 7721 8.979574 CAAGTATTTTCAGACGAAAGAAGTACT 58.020 33.333 0.00 0.00 42.00 2.73
6718 7722 8.762426 ACAAGTATTTTCAGACGAAAGAAGTAC 58.238 33.333 0.00 0.00 42.00 2.73
6719 7723 8.882415 ACAAGTATTTTCAGACGAAAGAAGTA 57.118 30.769 0.00 0.00 42.00 2.24
6720 7724 7.494625 TGACAAGTATTTTCAGACGAAAGAAGT 59.505 33.333 0.00 0.00 42.00 3.01
6721 7725 7.851508 TGACAAGTATTTTCAGACGAAAGAAG 58.148 34.615 0.00 0.00 42.00 2.85
6722 7726 7.780008 TGACAAGTATTTTCAGACGAAAGAA 57.220 32.000 0.00 0.00 42.00 2.52
6724 7728 7.796838 TGATGACAAGTATTTTCAGACGAAAG 58.203 34.615 0.00 0.00 42.00 2.62
6725 7729 7.722795 TGATGACAAGTATTTTCAGACGAAA 57.277 32.000 0.00 0.00 39.38 3.46
6726 7730 7.722795 TTGATGACAAGTATTTTCAGACGAA 57.277 32.000 0.00 0.00 0.00 3.85
6728 7732 8.843733 CATTTTGATGACAAGTATTTTCAGACG 58.156 33.333 0.00 0.00 37.32 4.18
6729 7733 9.897744 TCATTTTGATGACAAGTATTTTCAGAC 57.102 29.630 0.00 0.00 37.32 3.51
6741 7745 9.656040 CATCCCTTTTTATCATTTTGATGACAA 57.344 29.630 0.30 0.00 37.70 3.18
6742 7746 8.814931 ACATCCCTTTTTATCATTTTGATGACA 58.185 29.630 0.00 0.00 37.70 3.58
6814 7818 9.047947 GGGATGTATCTAAACTAAGGGATGTAT 57.952 37.037 0.00 0.00 0.00 2.29
6815 7819 8.239478 AGGGATGTATCTAAACTAAGGGATGTA 58.761 37.037 0.00 0.00 0.00 2.29
6816 7820 7.082972 AGGGATGTATCTAAACTAAGGGATGT 58.917 38.462 0.00 0.00 0.00 3.06
6817 7821 7.560796 AGGGATGTATCTAAACTAAGGGATG 57.439 40.000 0.00 0.00 0.00 3.51
6818 7822 8.582891 AAAGGGATGTATCTAAACTAAGGGAT 57.417 34.615 0.00 0.00 0.00 3.85
6819 7823 8.401955 AAAAGGGATGTATCTAAACTAAGGGA 57.598 34.615 0.00 0.00 0.00 4.20
6834 7838 9.657419 GTCATCAAAATGAATAAAAAGGGATGT 57.343 29.630 0.00 0.00 43.42 3.06
6835 7839 9.656040 TGTCATCAAAATGAATAAAAAGGGATG 57.344 29.630 0.00 0.00 43.42 3.51
6837 7841 9.709495 CTTGTCATCAAAATGAATAAAAAGGGA 57.291 29.630 0.00 0.00 43.42 4.20
6838 7842 9.492973 ACTTGTCATCAAAATGAATAAAAAGGG 57.507 29.630 0.00 0.00 43.42 3.95
6847 7851 9.958234 TTCGAAAATACTTGTCATCAAAATGAA 57.042 25.926 0.00 0.00 43.42 2.57
6848 7852 9.393249 GTTCGAAAATACTTGTCATCAAAATGA 57.607 29.630 0.00 0.00 39.63 2.57
6849 7853 8.357966 CGTTCGAAAATACTTGTCATCAAAATG 58.642 33.333 0.00 0.00 32.87 2.32
6850 7854 8.286800 TCGTTCGAAAATACTTGTCATCAAAAT 58.713 29.630 0.00 0.00 32.87 1.82
6851 7855 7.631822 TCGTTCGAAAATACTTGTCATCAAAA 58.368 30.769 0.00 0.00 32.87 2.44
6852 7856 7.179927 TCGTTCGAAAATACTTGTCATCAAA 57.820 32.000 0.00 0.00 32.87 2.69
6853 7857 6.772770 TCGTTCGAAAATACTTGTCATCAA 57.227 33.333 0.00 0.00 0.00 2.57
6854 7858 6.128661 CCTTCGTTCGAAAATACTTGTCATCA 60.129 38.462 0.00 0.00 0.00 3.07
6855 7859 6.241385 CCTTCGTTCGAAAATACTTGTCATC 58.759 40.000 0.00 0.00 0.00 2.92
6856 7860 5.121768 CCCTTCGTTCGAAAATACTTGTCAT 59.878 40.000 0.00 0.00 0.00 3.06
6857 7861 4.449743 CCCTTCGTTCGAAAATACTTGTCA 59.550 41.667 0.00 0.00 0.00 3.58
6858 7862 4.687483 TCCCTTCGTTCGAAAATACTTGTC 59.313 41.667 0.00 0.00 0.00 3.18
6859 7863 4.634199 TCCCTTCGTTCGAAAATACTTGT 58.366 39.130 0.00 0.00 0.00 3.16
6860 7864 4.689345 ACTCCCTTCGTTCGAAAATACTTG 59.311 41.667 0.00 0.00 0.00 3.16
6861 7865 4.891260 ACTCCCTTCGTTCGAAAATACTT 58.109 39.130 0.00 0.00 0.00 2.24
6862 7866 4.532314 ACTCCCTTCGTTCGAAAATACT 57.468 40.909 0.00 0.00 0.00 2.12
6863 7867 6.271566 AGATACTCCCTTCGTTCGAAAATAC 58.728 40.000 0.00 0.00 0.00 1.89
6864 7868 6.460676 GGAGATACTCCCTTCGTTCGAAAATA 60.461 42.308 0.00 0.00 44.36 1.40
6865 7869 5.340439 AGATACTCCCTTCGTTCGAAAAT 57.660 39.130 0.00 0.00 0.00 1.82
6866 7870 4.381292 GGAGATACTCCCTTCGTTCGAAAA 60.381 45.833 0.00 0.00 44.36 2.29
6867 7871 3.129988 GGAGATACTCCCTTCGTTCGAAA 59.870 47.826 0.00 0.00 44.36 3.46
6868 7872 2.686915 GGAGATACTCCCTTCGTTCGAA 59.313 50.000 6.54 7.40 44.36 3.71
6869 7873 2.295885 GGAGATACTCCCTTCGTTCGA 58.704 52.381 6.54 0.00 44.36 3.71
6870 7874 2.778187 GGAGATACTCCCTTCGTTCG 57.222 55.000 6.54 0.00 44.36 3.95
6879 7883 5.310451 AGTGAATCTAGACGGAGATACTCC 58.690 45.833 7.65 7.65 46.44 3.85
6880 7884 5.992829 TGAGTGAATCTAGACGGAGATACTC 59.007 44.000 14.31 14.31 39.71 2.59
6881 7885 5.931294 TGAGTGAATCTAGACGGAGATACT 58.069 41.667 0.00 0.00 35.01 2.12
6882 7886 6.811253 ATGAGTGAATCTAGACGGAGATAC 57.189 41.667 0.00 0.00 35.01 2.24
6885 7889 5.652452 TGAAATGAGTGAATCTAGACGGAGA 59.348 40.000 0.00 0.00 0.00 3.71
6890 7894 8.484641 TGTGAATGAAATGAGTGAATCTAGAC 57.515 34.615 0.00 0.00 0.00 2.59
6910 7914 5.369833 TCTCCGTCCAAAATTAACTGTGAA 58.630 37.500 0.00 0.00 0.00 3.18
6912 7916 4.994852 TCTCTCCGTCCAAAATTAACTGTG 59.005 41.667 0.00 0.00 0.00 3.66
6923 7927 8.707796 ATATAAGAAATACTCTCTCCGTCCAA 57.292 34.615 0.00 0.00 31.02 3.53
6924 7928 7.942894 TGATATAAGAAATACTCTCTCCGTCCA 59.057 37.037 0.00 0.00 31.02 4.02
6955 7959 8.836268 AACATCATAGCATGTTGAACAAAAAT 57.164 26.923 0.62 0.00 43.88 1.82
6980 7984 8.394971 TCGGACGGAGAAAGTAATATAATACA 57.605 34.615 0.93 0.00 0.00 2.29
6985 7989 9.683069 GTAATTTCGGACGGAGAAAGTAATATA 57.317 33.333 9.84 0.00 39.02 0.86
6992 7996 4.689345 ACAAGTAATTTCGGACGGAGAAAG 59.311 41.667 7.91 0.00 40.39 2.62
6993 7997 4.634199 ACAAGTAATTTCGGACGGAGAAA 58.366 39.130 5.04 5.04 41.17 2.52
6994 7998 4.261578 ACAAGTAATTTCGGACGGAGAA 57.738 40.909 0.00 0.00 0.00 2.87
6995 7999 3.947910 ACAAGTAATTTCGGACGGAGA 57.052 42.857 0.00 0.00 0.00 3.71
6996 8000 5.352643 AAAACAAGTAATTTCGGACGGAG 57.647 39.130 0.00 0.00 0.00 4.63
6997 8001 6.222389 TCTAAAACAAGTAATTTCGGACGGA 58.778 36.000 0.00 0.00 0.00 4.69
6998 8002 6.470557 TCTAAAACAAGTAATTTCGGACGG 57.529 37.500 0.00 0.00 0.00 4.79
6999 8003 8.944212 ATTTCTAAAACAAGTAATTTCGGACG 57.056 30.769 0.00 0.00 0.00 4.79
7054 8058 9.618890 CGTGGAAATGGATAGAAATGGATATAT 57.381 33.333 0.00 0.00 0.00 0.86
7055 8059 8.821817 TCGTGGAAATGGATAGAAATGGATATA 58.178 33.333 0.00 0.00 0.00 0.86
7056 8060 7.607991 GTCGTGGAAATGGATAGAAATGGATAT 59.392 37.037 0.00 0.00 0.00 1.63
7057 8061 6.934645 GTCGTGGAAATGGATAGAAATGGATA 59.065 38.462 0.00 0.00 0.00 2.59
7058 8062 5.765182 GTCGTGGAAATGGATAGAAATGGAT 59.235 40.000 0.00 0.00 0.00 3.41
7059 8063 5.123227 GTCGTGGAAATGGATAGAAATGGA 58.877 41.667 0.00 0.00 0.00 3.41
7060 8064 4.881273 TGTCGTGGAAATGGATAGAAATGG 59.119 41.667 0.00 0.00 0.00 3.16
7061 8065 6.094048 ACTTGTCGTGGAAATGGATAGAAATG 59.906 38.462 0.00 0.00 0.00 2.32
7062 8066 6.180472 ACTTGTCGTGGAAATGGATAGAAAT 58.820 36.000 0.00 0.00 0.00 2.17
7063 8067 5.556915 ACTTGTCGTGGAAATGGATAGAAA 58.443 37.500 0.00 0.00 0.00 2.52
7064 8068 5.160607 ACTTGTCGTGGAAATGGATAGAA 57.839 39.130 0.00 0.00 0.00 2.10
7065 8069 4.819105 ACTTGTCGTGGAAATGGATAGA 57.181 40.909 0.00 0.00 0.00 1.98
7066 8070 7.553881 AATTACTTGTCGTGGAAATGGATAG 57.446 36.000 0.00 0.00 0.00 2.08
7067 8071 7.201574 CGAAATTACTTGTCGTGGAAATGGATA 60.202 37.037 0.00 0.00 0.00 2.59
7068 8072 6.403200 CGAAATTACTTGTCGTGGAAATGGAT 60.403 38.462 0.00 0.00 0.00 3.41
7069 8073 5.106869 CGAAATTACTTGTCGTGGAAATGGA 60.107 40.000 0.00 0.00 0.00 3.41
7070 8074 5.086058 CGAAATTACTTGTCGTGGAAATGG 58.914 41.667 0.00 0.00 0.00 3.16
7071 8075 5.086058 CCGAAATTACTTGTCGTGGAAATG 58.914 41.667 0.00 0.00 32.93 2.32
7072 8076 4.998672 TCCGAAATTACTTGTCGTGGAAAT 59.001 37.500 0.00 0.00 32.93 2.17
7073 8077 4.211794 GTCCGAAATTACTTGTCGTGGAAA 59.788 41.667 0.00 0.00 32.93 3.13
7074 8078 3.742369 GTCCGAAATTACTTGTCGTGGAA 59.258 43.478 0.00 0.00 32.93 3.53
7075 8079 3.319755 GTCCGAAATTACTTGTCGTGGA 58.680 45.455 0.00 0.00 32.93 4.02
7076 8080 2.091588 CGTCCGAAATTACTTGTCGTGG 59.908 50.000 0.00 0.00 32.93 4.94
7077 8081 2.091588 CCGTCCGAAATTACTTGTCGTG 59.908 50.000 0.00 0.00 32.93 4.35
7078 8082 2.030007 TCCGTCCGAAATTACTTGTCGT 60.030 45.455 0.00 0.00 32.93 4.34
7079 8083 2.597305 CTCCGTCCGAAATTACTTGTCG 59.403 50.000 0.00 0.00 34.58 4.35
7080 8084 2.928116 CCTCCGTCCGAAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
7081 8085 2.354403 CCCTCCGTCCGAAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
7082 8086 2.093869 TCCCTCCGTCCGAAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
7083 8087 2.167900 CTCCCTCCGTCCGAAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
7084 8088 1.755380 CTCCCTCCGTCCGAAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
7085 8089 1.479730 ACTCCCTCCGTCCGAAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
7086 8090 1.856629 ACTCCCTCCGTCCGAAATTA 58.143 50.000 0.00 0.00 0.00 1.40
7087 8091 1.856629 TACTCCCTCCGTCCGAAATT 58.143 50.000 0.00 0.00 0.00 1.82
7088 8092 2.083628 ATACTCCCTCCGTCCGAAAT 57.916 50.000 0.00 0.00 0.00 2.17
7089 8093 2.734755 TATACTCCCTCCGTCCGAAA 57.265 50.000 0.00 0.00 0.00 3.46
7090 8094 2.107031 TGATATACTCCCTCCGTCCGAA 59.893 50.000 0.00 0.00 0.00 4.30
7091 8095 1.701292 TGATATACTCCCTCCGTCCGA 59.299 52.381 0.00 0.00 0.00 4.55
7092 8096 2.195741 TGATATACTCCCTCCGTCCG 57.804 55.000 0.00 0.00 0.00 4.79
7093 8097 4.857679 AGTATGATATACTCCCTCCGTCC 58.142 47.826 0.00 0.00 0.00 4.79
7094 8098 6.887013 TCTAGTATGATATACTCCCTCCGTC 58.113 44.000 4.86 0.00 0.00 4.79
7095 8099 6.887886 TCTAGTATGATATACTCCCTCCGT 57.112 41.667 4.86 0.00 0.00 4.69
7096 8100 8.215050 AGATTCTAGTATGATATACTCCCTCCG 58.785 40.741 4.86 0.00 0.00 4.63
7097 8101 9.930158 AAGATTCTAGTATGATATACTCCCTCC 57.070 37.037 4.86 0.00 0.00 4.30



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.