Multiple sequence alignment - TraesCS4A01G167300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G167300 chr4A 100.000 5870 0 0 1 5870 413581882 413576013 0.000000e+00 10840.0
1 TraesCS4A01G167300 chr4A 96.313 217 8 0 5619 5835 413568140 413567924 2.010000e-94 357.0
2 TraesCS4A01G167300 chr4A 95.000 180 8 1 3045 3223 413578761 413578582 1.250000e-71 281.0
3 TraesCS4A01G167300 chr4A 95.000 180 8 1 3122 3301 413578838 413578660 1.250000e-71 281.0
4 TraesCS4A01G167300 chr4A 78.661 478 55 27 1592 2030 721797665 721797196 2.080000e-69 274.0
5 TraesCS4A01G167300 chr4A 90.323 186 13 1 5439 5619 413568357 413568172 7.600000e-59 239.0
6 TraesCS4A01G167300 chr4A 94.231 52 3 0 5220 5271 413576590 413576539 4.880000e-11 80.5
7 TraesCS4A01G167300 chr4A 94.231 52 3 0 5293 5344 413576663 413576612 4.880000e-11 80.5
8 TraesCS4A01G167300 chr4A 100.000 28 0 0 5415 5442 352495900 352495927 1.100000e-02 52.8
9 TraesCS4A01G167300 chr4A 100.000 28 0 0 5415 5442 413568424 413568397 1.100000e-02 52.8
10 TraesCS4A01G167300 chr4B 93.871 2382 83 22 846 3187 245087327 245084969 0.000000e+00 3531.0
11 TraesCS4A01G167300 chr4B 95.442 1119 33 8 3308 4415 245084968 245083857 0.000000e+00 1768.0
12 TraesCS4A01G167300 chr4B 89.959 986 54 15 4453 5413 245083862 245082897 0.000000e+00 1230.0
13 TraesCS4A01G167300 chr4B 88.866 485 29 9 404 866 245087832 245087351 1.830000e-159 573.0
14 TraesCS4A01G167300 chr4B 93.122 189 9 3 170 357 245589443 245589258 2.080000e-69 274.0
15 TraesCS4A01G167300 chr4B 97.203 143 3 1 3123 3265 245085110 245084969 2.110000e-59 241.0
16 TraesCS4A01G167300 chr4B 97.917 48 1 0 5297 5344 245083083 245083036 3.770000e-12 84.2
17 TraesCS4A01G167300 chr4D 94.938 1699 47 16 3363 5038 216744485 216746167 0.000000e+00 2625.0
18 TraesCS4A01G167300 chr4D 90.689 1611 46 49 762 2336 216741925 216743467 0.000000e+00 2049.0
19 TraesCS4A01G167300 chr4D 93.896 901 33 5 2334 3214 216743549 216744447 0.000000e+00 1339.0
20 TraesCS4A01G167300 chr4D 90.614 586 30 9 170 732 216740189 216740772 0.000000e+00 754.0
21 TraesCS4A01G167300 chr4D 97.129 209 5 1 3122 3330 216744278 216744485 9.360000e-93 351.0
22 TraesCS4A01G167300 chr4D 93.548 217 13 1 5619 5835 268500317 268500102 7.340000e-84 322.0
23 TraesCS4A01G167300 chr4D 82.262 389 34 12 5036 5416 216750779 216751140 2.660000e-78 303.0
24 TraesCS4A01G167300 chr4D 88.889 189 16 1 5439 5622 268492214 268492026 1.650000e-55 228.0
25 TraesCS4A01G167300 chr4D 87.831 189 18 1 5439 5622 268500534 268500346 3.560000e-52 217.0
26 TraesCS4A01G167300 chr4D 93.069 101 6 1 3192 3292 216744270 216744369 4.740000e-31 147.0
27 TraesCS4A01G167300 chr4D 90.099 101 9 1 3037 3136 216744347 216744447 4.770000e-26 130.0
28 TraesCS4A01G167300 chr4D 86.585 82 5 3 5269 5344 216750917 216750998 1.050000e-12 86.1
29 TraesCS4A01G167300 chr5B 95.434 219 8 1 5619 5835 672282673 672282455 1.210000e-91 348.0
30 TraesCS4A01G167300 chr5B 95.392 217 10 0 5619 5835 672274394 672274178 4.350000e-91 346.0
31 TraesCS4A01G167300 chr5B 91.005 189 12 1 5439 5622 672274611 672274423 3.510000e-62 250.0
32 TraesCS4A01G167300 chr5B 80.386 311 48 11 2190 2495 184297004 184296702 2.130000e-54 224.0
33 TraesCS4A01G167300 chr1D 93.578 218 11 3 5619 5835 269341849 269342064 7.340000e-84 322.0
34 TraesCS4A01G167300 chr1D 92.661 218 13 3 5619 5835 269324095 269324310 1.590000e-80 311.0
35 TraesCS4A01G167300 chr1D 78.657 417 45 26 1592 1970 448761708 448761298 2.730000e-58 237.0
36 TraesCS4A01G167300 chr1D 89.785 186 14 1 5439 5619 269323878 269324063 3.540000e-57 233.0
37 TraesCS4A01G167300 chr1D 89.785 186 14 2 5439 5619 269341632 269341817 3.540000e-57 233.0
38 TraesCS4A01G167300 chr1D 97.222 36 1 0 1553 1588 22942558 22942523 1.770000e-05 62.1
39 TraesCS4A01G167300 chr1D 100.000 28 0 0 5415 5442 269323811 269323838 1.100000e-02 52.8
40 TraesCS4A01G167300 chr1B 93.548 217 12 2 5619 5835 134649476 134649262 7.340000e-84 322.0
41 TraesCS4A01G167300 chr1B 93.548 217 13 1 5619 5835 134656687 134656472 7.340000e-84 322.0
42 TraesCS4A01G167300 chr1B 88.360 189 17 1 5439 5622 134649693 134649505 7.660000e-54 222.0
43 TraesCS4A01G167300 chr5D 91.441 222 14 4 5619 5835 460258483 460258262 3.440000e-77 300.0
44 TraesCS4A01G167300 chr5D 80.064 311 49 10 2190 2495 174005044 174005346 9.900000e-53 219.0
45 TraesCS4A01G167300 chr5D 97.222 36 1 0 1553 1588 401279475 401279440 1.770000e-05 62.1
46 TraesCS4A01G167300 chr2B 78.870 478 55 27 1592 2030 708836843 708837313 1.250000e-71 281.0
47 TraesCS4A01G167300 chr2B 81.818 319 41 12 1717 2025 780396657 780396346 9.760000e-63 252.0
48 TraesCS4A01G167300 chr2B 97.222 36 1 0 1553 1588 37901209 37901174 1.770000e-05 62.1
49 TraesCS4A01G167300 chr2B 100.000 28 0 0 5415 5442 586776015 586775988 1.100000e-02 52.8
50 TraesCS4A01G167300 chr7B 82.407 324 41 11 1717 2030 687939591 687939908 9.700000e-68 268.0
51 TraesCS4A01G167300 chr7B 100.000 28 0 0 5415 5442 244569081 244569054 1.100000e-02 52.8
52 TraesCS4A01G167300 chr6A 83.168 303 38 12 1742 2032 353894939 353894638 1.250000e-66 265.0
53 TraesCS4A01G167300 chr6A 97.222 36 1 0 1553 1588 29543938 29543903 1.770000e-05 62.1
54 TraesCS4A01G167300 chr5A 80.707 311 47 11 2190 2495 197210468 197210770 4.580000e-56 230.0
55 TraesCS4A01G167300 chr5A 84.034 119 13 4 1433 1551 627351202 627351314 6.220000e-20 110.0
56 TraesCS4A01G167300 chr5A 87.879 66 8 0 5182 5247 283101260 283101325 1.750000e-10 78.7
57 TraesCS4A01G167300 chr3D 95.172 145 7 0 5439 5583 217580556 217580700 4.580000e-56 230.0
58 TraesCS4A01G167300 chr3D 100.000 28 0 0 5415 5442 217580489 217580516 1.100000e-02 52.8
59 TraesCS4A01G167300 chr3A 95.172 145 7 0 5439 5583 291819886 291819742 4.580000e-56 230.0
60 TraesCS4A01G167300 chr3A 84.956 113 11 4 1439 1551 691491231 691491125 6.220000e-20 110.0
61 TraesCS4A01G167300 chr3A 100.000 28 0 0 5415 5442 291819953 291819926 1.100000e-02 52.8
62 TraesCS4A01G167300 chr7A 86.175 217 22 6 1339 1555 154039437 154039229 1.650000e-55 228.0
63 TraesCS4A01G167300 chrUn 77.938 417 48 24 1592 1970 111340038 111339628 2.750000e-53 220.0
64 TraesCS4A01G167300 chrUn 100.000 28 0 0 5415 5442 186637 186664 1.100000e-02 52.8
65 TraesCS4A01G167300 chr6D 78.019 414 47 25 1592 1967 467485251 467485658 2.750000e-53 220.0
66 TraesCS4A01G167300 chr7D 97.222 36 1 0 1553 1588 75551994 75552029 1.770000e-05 62.1
67 TraesCS4A01G167300 chr7D 100.000 28 0 0 5415 5442 126809849 126809876 1.100000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G167300 chr4A 413576013 413581882 5869 True 10840.000000 10840 100.000000 1 5870 1 chr4A.!!$R1 5869
1 TraesCS4A01G167300 chr4A 413567924 413568424 500 True 216.266667 357 95.545333 5415 5835 3 chr4A.!!$R3 420
2 TraesCS4A01G167300 chr4B 245082897 245087832 4935 True 1237.866667 3531 93.876333 404 5413 6 chr4B.!!$R2 5009
3 TraesCS4A01G167300 chr4D 216740189 216746167 5978 False 1056.428571 2625 92.919143 170 5038 7 chr4D.!!$F1 4868

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
815 1962 0.038310 AGGCTAAAGTGTTGGAGGCC 59.962 55.000 0.00 0.00 38.50 5.19 F
1337 2559 0.179045 GATGTGCCCCTCGCTACATT 60.179 55.000 0.00 0.00 38.50 2.71 F
1912 3146 0.749649 GTGCACATGTTTTGTCCCCA 59.250 50.000 13.17 0.00 36.00 4.96 F
2164 3399 1.411977 CCATGCCCAAACTGTTGAACA 59.588 47.619 0.00 0.00 36.83 3.18 F
2426 3745 1.559682 GGGGAGCCAATGACAGTAGAA 59.440 52.381 0.00 0.00 0.00 2.10 F
4159 5507 0.032540 GGACCTTTTGGCAGTGCAAG 59.967 55.000 18.61 11.84 45.59 4.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2543 3862 1.815003 CCTGTTTCCCATCTTCTGCAC 59.185 52.381 0.00 0.0 0.0 4.57 R
3032 4371 2.496899 ACTTACAAGCTGGGTCCATG 57.503 50.000 0.00 0.0 0.0 3.66 R
3819 5158 1.937191 AAAACCCCGAAGCATTGGAT 58.063 45.000 0.00 0.0 0.0 3.41 R
4135 5483 1.000896 CTGCCAAAAGGTCCCCGAT 60.001 57.895 0.00 0.0 0.0 4.18 R
4168 5516 0.745845 CTTCAGAGCCCGACCCAATG 60.746 60.000 0.00 0.0 0.0 2.82 R
5199 6564 0.106819 AGGCCTGGCAGAGCTTAATG 60.107 55.000 22.05 0.0 0.0 1.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 7.845066 AGAACCCTTAAATTAGAGCTTAACG 57.155 36.000 0.00 0.00 0.00 3.18
27 28 6.315642 AGAACCCTTAAATTAGAGCTTAACGC 59.684 38.462 0.00 0.00 39.57 4.84
28 29 4.569564 ACCCTTAAATTAGAGCTTAACGCG 59.430 41.667 3.53 3.53 45.59 6.01
29 30 4.569564 CCCTTAAATTAGAGCTTAACGCGT 59.430 41.667 5.58 5.58 45.59 6.01
30 31 5.750067 CCCTTAAATTAGAGCTTAACGCGTA 59.250 40.000 14.46 0.00 45.59 4.42
31 32 6.074463 CCCTTAAATTAGAGCTTAACGCGTAG 60.074 42.308 14.46 8.75 45.59 3.51
32 33 6.694411 CCTTAAATTAGAGCTTAACGCGTAGA 59.306 38.462 14.46 0.00 45.59 2.59
33 34 7.221452 CCTTAAATTAGAGCTTAACGCGTAGAA 59.779 37.037 14.46 9.45 45.59 2.10
34 35 6.570690 AAATTAGAGCTTAACGCGTAGAAG 57.429 37.500 22.87 22.87 45.59 2.85
35 36 4.691860 TTAGAGCTTAACGCGTAGAAGT 57.308 40.909 25.78 16.76 45.59 3.01
36 37 5.801350 TTAGAGCTTAACGCGTAGAAGTA 57.199 39.130 25.78 13.70 45.59 2.24
37 38 4.275838 AGAGCTTAACGCGTAGAAGTAG 57.724 45.455 25.78 13.77 45.59 2.57
38 39 3.688673 AGAGCTTAACGCGTAGAAGTAGT 59.311 43.478 25.78 15.73 45.59 2.73
39 40 4.872691 AGAGCTTAACGCGTAGAAGTAGTA 59.127 41.667 25.78 7.20 45.59 1.82
40 41 4.902964 AGCTTAACGCGTAGAAGTAGTAC 58.097 43.478 25.78 14.23 45.59 2.73
41 42 4.633565 AGCTTAACGCGTAGAAGTAGTACT 59.366 41.667 25.78 15.72 45.59 2.73
42 43 4.727655 GCTTAACGCGTAGAAGTAGTACTG 59.272 45.833 25.78 7.87 0.00 2.74
43 44 5.672321 GCTTAACGCGTAGAAGTAGTACTGT 60.672 44.000 25.78 5.77 0.00 3.55
44 45 6.455646 GCTTAACGCGTAGAAGTAGTACTGTA 60.456 42.308 25.78 4.88 0.00 2.74
45 46 7.539712 TTAACGCGTAGAAGTAGTACTGTAT 57.460 36.000 14.46 0.00 0.00 2.29
46 47 6.428385 AACGCGTAGAAGTAGTACTGTATT 57.572 37.500 14.46 0.00 0.00 1.89
47 48 7.539712 AACGCGTAGAAGTAGTACTGTATTA 57.460 36.000 14.46 0.00 0.00 0.98
48 49 7.539712 ACGCGTAGAAGTAGTACTGTATTAA 57.460 36.000 11.67 0.00 0.00 1.40
49 50 7.974675 ACGCGTAGAAGTAGTACTGTATTAAA 58.025 34.615 11.67 0.00 0.00 1.52
50 51 8.616076 ACGCGTAGAAGTAGTACTGTATTAAAT 58.384 33.333 11.67 0.00 0.00 1.40
62 63 9.216117 AGTACTGTATTAAATATTGAATCCGCC 57.784 33.333 0.95 0.00 0.00 6.13
63 64 8.995220 GTACTGTATTAAATATTGAATCCGCCA 58.005 33.333 0.95 0.00 0.00 5.69
64 65 7.871853 ACTGTATTAAATATTGAATCCGCCAC 58.128 34.615 0.95 0.00 0.00 5.01
65 66 7.040686 ACTGTATTAAATATTGAATCCGCCACC 60.041 37.037 0.95 0.00 0.00 4.61
66 67 7.001674 TGTATTAAATATTGAATCCGCCACCT 58.998 34.615 0.95 0.00 0.00 4.00
67 68 6.575162 ATTAAATATTGAATCCGCCACCTC 57.425 37.500 0.00 0.00 0.00 3.85
68 69 3.576078 AATATTGAATCCGCCACCTCA 57.424 42.857 0.00 0.00 0.00 3.86
69 70 3.576078 ATATTGAATCCGCCACCTCAA 57.424 42.857 0.00 0.00 32.67 3.02
70 71 1.463674 ATTGAATCCGCCACCTCAAC 58.536 50.000 0.00 0.00 31.00 3.18
71 72 0.400213 TTGAATCCGCCACCTCAACT 59.600 50.000 0.00 0.00 0.00 3.16
72 73 0.400213 TGAATCCGCCACCTCAACTT 59.600 50.000 0.00 0.00 0.00 2.66
73 74 1.202879 TGAATCCGCCACCTCAACTTT 60.203 47.619 0.00 0.00 0.00 2.66
74 75 1.886542 GAATCCGCCACCTCAACTTTT 59.113 47.619 0.00 0.00 0.00 2.27
75 76 1.247567 ATCCGCCACCTCAACTTTTG 58.752 50.000 0.00 0.00 0.00 2.44
76 77 0.181587 TCCGCCACCTCAACTTTTGA 59.818 50.000 0.00 0.00 38.17 2.69
77 78 1.202879 TCCGCCACCTCAACTTTTGAT 60.203 47.619 0.00 0.00 39.30 2.57
78 79 1.068333 CCGCCACCTCAACTTTTGATG 60.068 52.381 0.00 0.00 39.30 3.07
79 80 1.879380 CGCCACCTCAACTTTTGATGA 59.121 47.619 0.00 0.00 39.30 2.92
80 81 2.293122 CGCCACCTCAACTTTTGATGAA 59.707 45.455 0.00 0.00 39.30 2.57
81 82 3.057315 CGCCACCTCAACTTTTGATGAAT 60.057 43.478 0.00 0.00 39.30 2.57
82 83 4.155826 CGCCACCTCAACTTTTGATGAATA 59.844 41.667 0.00 0.00 39.30 1.75
83 84 5.335583 CGCCACCTCAACTTTTGATGAATAA 60.336 40.000 0.00 0.00 39.30 1.40
84 85 6.454795 GCCACCTCAACTTTTGATGAATAAA 58.545 36.000 0.00 0.00 39.30 1.40
85 86 7.099120 GCCACCTCAACTTTTGATGAATAAAT 58.901 34.615 0.00 0.00 39.30 1.40
86 87 8.250332 GCCACCTCAACTTTTGATGAATAAATA 58.750 33.333 0.00 0.00 39.30 1.40
122 123 2.905959 CGCAAGTCATCTCAATTGCA 57.094 45.000 0.00 0.00 46.48 4.08
123 124 3.206034 CGCAAGTCATCTCAATTGCAA 57.794 42.857 0.00 0.00 46.48 4.08
124 125 3.168963 CGCAAGTCATCTCAATTGCAAG 58.831 45.455 4.94 0.00 46.48 4.01
125 126 3.365666 CGCAAGTCATCTCAATTGCAAGT 60.366 43.478 4.94 0.00 46.48 3.16
126 127 4.553323 GCAAGTCATCTCAATTGCAAGTT 58.447 39.130 4.94 0.00 45.66 2.66
127 128 4.384846 GCAAGTCATCTCAATTGCAAGTTG 59.615 41.667 4.94 9.89 45.66 3.16
128 129 5.765176 CAAGTCATCTCAATTGCAAGTTGA 58.235 37.500 7.16 17.56 34.63 3.18
132 133 1.973138 CTCAATTGCAAGTTGAGCGG 58.027 50.000 25.12 12.77 44.07 5.52
133 134 1.536766 CTCAATTGCAAGTTGAGCGGA 59.463 47.619 25.12 9.40 44.07 5.54
134 135 2.161855 TCAATTGCAAGTTGAGCGGAT 58.838 42.857 7.16 0.00 32.23 4.18
135 136 3.342719 TCAATTGCAAGTTGAGCGGATA 58.657 40.909 7.16 0.00 32.23 2.59
136 137 3.947196 TCAATTGCAAGTTGAGCGGATAT 59.053 39.130 7.16 0.00 32.23 1.63
137 138 4.035558 TCAATTGCAAGTTGAGCGGATATC 59.964 41.667 7.16 0.00 32.23 1.63
138 139 1.953559 TGCAAGTTGAGCGGATATCC 58.046 50.000 12.14 12.14 33.85 2.59
139 140 1.230324 GCAAGTTGAGCGGATATCCC 58.770 55.000 16.36 8.96 0.00 3.85
140 141 1.884235 CAAGTTGAGCGGATATCCCC 58.116 55.000 16.36 7.28 0.00 4.81
141 142 1.417890 CAAGTTGAGCGGATATCCCCT 59.582 52.381 16.36 12.62 0.00 4.79
142 143 1.807814 AGTTGAGCGGATATCCCCTT 58.192 50.000 16.36 1.57 0.00 3.95
143 144 1.694696 AGTTGAGCGGATATCCCCTTC 59.305 52.381 16.36 11.21 0.00 3.46
144 145 1.416401 GTTGAGCGGATATCCCCTTCA 59.584 52.381 16.36 13.51 0.00 3.02
145 146 1.801242 TGAGCGGATATCCCCTTCAA 58.199 50.000 16.36 0.27 0.00 2.69
146 147 2.123589 TGAGCGGATATCCCCTTCAAA 58.876 47.619 16.36 0.00 0.00 2.69
147 148 2.507886 TGAGCGGATATCCCCTTCAAAA 59.492 45.455 16.36 0.00 0.00 2.44
148 149 3.053991 TGAGCGGATATCCCCTTCAAAAA 60.054 43.478 16.36 0.00 0.00 1.94
214 215 3.552890 GGTGGGCTTTTGTGATCAAGAAC 60.553 47.826 0.00 0.00 34.88 3.01
301 303 1.535462 ACGGAAACTCCAAGAAATGCG 59.465 47.619 0.00 0.00 35.91 4.73
382 384 1.008538 CACACCGCAAGAAGCCAAC 60.009 57.895 0.00 0.00 41.38 3.77
406 408 2.100916 CGACCCCAAATCGAGACATACT 59.899 50.000 0.00 0.00 42.25 2.12
499 502 4.144297 CCAAGATTGGGACAGAGTTTTGA 58.856 43.478 3.52 0.00 44.70 2.69
520 523 2.926779 AGCACCTGGAGCTGCTCA 60.927 61.111 28.95 15.11 39.66 4.26
525 528 1.302285 CCTGGAGCTGCTCAATGGT 59.698 57.895 28.95 0.00 31.08 3.55
586 589 4.961511 TTCTGCTGCGCCGTCGTT 62.962 61.111 4.18 0.00 38.14 3.85
630 641 1.078285 AGGAGAGAGACGGTCGGTC 60.078 63.158 1.89 2.39 46.45 4.79
640 651 2.762875 GGTCGGTCGGGAGGGAAT 60.763 66.667 0.00 0.00 0.00 3.01
677 692 0.179124 CGGAGAGGAAGAGGCTTTCG 60.179 60.000 0.00 0.00 0.00 3.46
699 723 4.035675 CGTTTATTGGATCTTCTTCAGGCC 59.964 45.833 0.00 0.00 0.00 5.19
722 746 1.547372 TGAACGGGCCACTACTTACTC 59.453 52.381 4.39 0.00 0.00 2.59
728 752 3.056035 CGGGCCACTACTTACTCTTTTCT 60.056 47.826 4.39 0.00 0.00 2.52
758 782 2.474410 ACAGGCCACTACTTACTTGC 57.526 50.000 5.01 0.00 0.00 4.01
808 1955 2.789409 CCTGGCTAGGCTAAAGTGTT 57.211 50.000 18.18 0.00 37.25 3.32
809 1956 2.359900 CCTGGCTAGGCTAAAGTGTTG 58.640 52.381 18.18 0.00 37.25 3.33
811 1958 1.982226 TGGCTAGGCTAAAGTGTTGGA 59.018 47.619 18.18 0.00 0.00 3.53
812 1959 2.027192 TGGCTAGGCTAAAGTGTTGGAG 60.027 50.000 18.18 0.00 0.00 3.86
814 1961 2.633488 CTAGGCTAAAGTGTTGGAGGC 58.367 52.381 0.00 0.00 34.84 4.70
815 1962 0.038310 AGGCTAAAGTGTTGGAGGCC 59.962 55.000 0.00 0.00 38.50 5.19
962 2179 5.070047 CCACCCCGTGTAGTAGAAATAGAAT 59.930 44.000 0.00 0.00 0.00 2.40
1065 2282 6.259608 CAGCTCAGGATTTTGTTATCGATTCT 59.740 38.462 1.71 0.00 0.00 2.40
1124 2341 1.885850 GGTTTCTCGGCGTGTGTGT 60.886 57.895 6.85 0.00 0.00 3.72
1125 2342 1.275657 GTTTCTCGGCGTGTGTGTG 59.724 57.895 6.85 0.00 0.00 3.82
1248 2469 2.597903 GTGGGGGAGGCCAGATTC 59.402 66.667 5.01 0.00 0.00 2.52
1273 2494 1.152355 TTTTGGGCCTGAGGTTGGG 60.152 57.895 4.53 0.00 0.00 4.12
1337 2559 0.179045 GATGTGCCCCTCGCTACATT 60.179 55.000 0.00 0.00 38.50 2.71
1359 2581 5.883685 TCTTATGATGCTGATCCTTCTGT 57.116 39.130 0.00 0.00 0.00 3.41
1551 2775 7.279536 GCTTGATGACTGTTGATGATCTCTTAA 59.720 37.037 0.00 0.00 0.00 1.85
1552 2776 9.327628 CTTGATGACTGTTGATGATCTCTTAAT 57.672 33.333 0.00 0.00 0.00 1.40
1555 2779 6.351711 TGACTGTTGATGATCTCTTAATGGG 58.648 40.000 0.00 0.00 0.00 4.00
1556 2780 5.128919 ACTGTTGATGATCTCTTAATGGGC 58.871 41.667 0.00 0.00 0.00 5.36
1560 2784 6.436847 TGTTGATGATCTCTTAATGGGCAAAA 59.563 34.615 0.00 0.00 0.00 2.44
1637 2861 8.345565 GTTCTATGTTTCAACTGTCAAGATGTT 58.654 33.333 0.00 0.00 0.00 2.71
1694 2918 3.393278 TGCTTTAACAGGGTAGGTTCTGT 59.607 43.478 0.00 0.00 45.06 3.41
1710 2934 7.092137 AGGTTCTGTTGTTGTTTAACCTAAC 57.908 36.000 2.82 0.00 43.65 2.34
1748 2972 8.885722 GCCAAATATTGACAAATTGATTCATGT 58.114 29.630 0.00 0.00 0.00 3.21
1883 3111 3.613030 TCACTGGACATGTGATGATTGG 58.387 45.455 1.15 0.00 39.23 3.16
1884 3112 3.009363 TCACTGGACATGTGATGATTGGT 59.991 43.478 1.15 0.00 39.23 3.67
1887 3115 4.011698 CTGGACATGTGATGATTGGTTGA 58.988 43.478 1.15 0.00 0.00 3.18
1912 3146 0.749649 GTGCACATGTTTTGTCCCCA 59.250 50.000 13.17 0.00 36.00 4.96
1927 3161 3.392947 TGTCCCCATTTGTCAGACAAGTA 59.607 43.478 15.61 3.15 39.53 2.24
1967 3201 6.682423 TTGGATGATATGCACAAGTACTTG 57.318 37.500 29.76 29.76 45.58 3.16
2075 3309 4.261072 CCTGATGCTGACTGTATTTGATGC 60.261 45.833 0.00 0.00 0.00 3.91
2079 3313 5.089970 TGCTGACTGTATTTGATGCTACT 57.910 39.130 0.00 0.00 0.00 2.57
2086 3320 8.094548 TGACTGTATTTGATGCTACTTAGTTGT 58.905 33.333 0.00 0.00 0.00 3.32
2164 3399 1.411977 CCATGCCCAAACTGTTGAACA 59.588 47.619 0.00 0.00 36.83 3.18
2380 3699 7.016153 TGGTTAACTTCACTTCATATGGTCT 57.984 36.000 5.42 0.00 0.00 3.85
2426 3745 1.559682 GGGGAGCCAATGACAGTAGAA 59.440 52.381 0.00 0.00 0.00 2.10
2507 3826 6.119240 TCAATGGTGAGTCTCATTCTCTTT 57.881 37.500 5.68 0.00 31.95 2.52
2543 3862 3.617540 TGACAAAAGGTATTGCACACG 57.382 42.857 0.00 0.00 33.52 4.49
2645 3980 4.011966 TGATGGCTGCATACTTCCTATG 57.988 45.455 0.50 0.00 36.08 2.23
2646 3981 2.936919 TGGCTGCATACTTCCTATGG 57.063 50.000 0.50 0.00 33.83 2.74
2649 3984 3.714280 TGGCTGCATACTTCCTATGGTAA 59.286 43.478 0.50 0.00 33.83 2.85
2671 4007 8.034804 GGTAACAAAGTATAACTACGGAGGAAA 58.965 37.037 0.00 0.00 32.82 3.13
2685 4021 3.815401 CGGAGGAAACTGAACATCTTTGT 59.185 43.478 0.00 0.00 44.43 2.83
2705 4041 9.796120 TCTTTGTTGGAAATTTTTGTAGTGTAG 57.204 29.630 0.00 0.00 0.00 2.74
2777 4116 2.027192 GTGGATCTAGACCAAACCAGCA 60.027 50.000 13.53 0.00 39.22 4.41
2778 4117 2.027192 TGGATCTAGACCAAACCAGCAC 60.027 50.000 10.51 0.00 34.25 4.40
2785 4124 1.671845 GACCAAACCAGCACGTGTTTA 59.328 47.619 18.38 0.00 33.57 2.01
2910 4249 9.169592 TGACTAATTACTTTGCTGTATTTACCC 57.830 33.333 0.00 0.00 0.00 3.69
2937 4276 9.410556 GCTCACATTTTTCTGTATTTTACACAT 57.589 29.630 0.00 0.00 34.46 3.21
3032 4371 4.883585 TCCTTATTGCTGGTCATGATGAAC 59.116 41.667 2.92 2.92 33.88 3.18
3058 4397 4.299978 GACCCAGCTTGTAAGTATCGATC 58.700 47.826 0.00 0.00 0.00 3.69
3059 4398 3.069729 ACCCAGCTTGTAAGTATCGATCC 59.930 47.826 0.00 0.00 0.00 3.36
3060 4399 3.555168 CCCAGCTTGTAAGTATCGATCCC 60.555 52.174 0.00 0.00 0.00 3.85
3061 4400 3.322254 CCAGCTTGTAAGTATCGATCCCT 59.678 47.826 0.00 0.00 0.00 4.20
3062 4401 4.202264 CCAGCTTGTAAGTATCGATCCCTT 60.202 45.833 0.00 8.31 0.00 3.95
3063 4402 5.360591 CAGCTTGTAAGTATCGATCCCTTT 58.639 41.667 13.56 3.13 0.00 3.11
3064 4403 6.462487 CCAGCTTGTAAGTATCGATCCCTTTA 60.462 42.308 13.56 2.32 0.00 1.85
3065 4404 6.984474 CAGCTTGTAAGTATCGATCCCTTTAA 59.016 38.462 13.56 9.64 0.00 1.52
3066 4405 6.985059 AGCTTGTAAGTATCGATCCCTTTAAC 59.015 38.462 13.56 8.75 0.00 2.01
3067 4406 6.985059 GCTTGTAAGTATCGATCCCTTTAACT 59.015 38.462 13.56 2.76 0.00 2.24
3068 4407 7.169476 GCTTGTAAGTATCGATCCCTTTAACTC 59.831 40.741 13.56 0.00 0.00 3.01
3069 4408 7.649533 TGTAAGTATCGATCCCTTTAACTCA 57.350 36.000 13.56 0.00 0.00 3.41
3070 4409 7.713750 TGTAAGTATCGATCCCTTTAACTCAG 58.286 38.462 13.56 0.00 0.00 3.35
3071 4410 7.558807 TGTAAGTATCGATCCCTTTAACTCAGA 59.441 37.037 13.56 0.00 0.00 3.27
3072 4411 7.604657 AAGTATCGATCCCTTTAACTCAGAT 57.395 36.000 0.00 0.00 0.00 2.90
3073 4412 7.222000 AGTATCGATCCCTTTAACTCAGATC 57.778 40.000 0.00 0.00 0.00 2.75
3074 4413 6.778069 AGTATCGATCCCTTTAACTCAGATCA 59.222 38.462 0.00 0.00 34.34 2.92
3075 4414 6.678568 ATCGATCCCTTTAACTCAGATCAT 57.321 37.500 0.00 0.00 34.34 2.45
3076 4415 6.485830 TCGATCCCTTTAACTCAGATCATT 57.514 37.500 0.00 0.00 34.34 2.57
3077 4416 6.283694 TCGATCCCTTTAACTCAGATCATTG 58.716 40.000 0.00 0.00 34.34 2.82
3078 4417 5.468072 CGATCCCTTTAACTCAGATCATTGG 59.532 44.000 0.00 0.00 34.34 3.16
3079 4418 5.116084 TCCCTTTAACTCAGATCATTGGG 57.884 43.478 0.00 0.00 0.00 4.12
3080 4419 4.540099 TCCCTTTAACTCAGATCATTGGGT 59.460 41.667 0.00 0.00 31.70 4.51
3081 4420 5.015178 TCCCTTTAACTCAGATCATTGGGTT 59.985 40.000 5.62 5.62 43.82 4.11
3082 4421 5.126061 CCCTTTAACTCAGATCATTGGGTTG 59.874 44.000 9.83 0.00 41.67 3.77
3083 4422 5.711976 CCTTTAACTCAGATCATTGGGTTGT 59.288 40.000 9.83 0.00 41.67 3.32
3084 4423 6.127897 CCTTTAACTCAGATCATTGGGTTGTC 60.128 42.308 9.83 0.00 41.67 3.18
3085 4424 4.371624 AACTCAGATCATTGGGTTGTCA 57.628 40.909 0.00 0.00 40.18 3.58
3086 4425 3.947868 ACTCAGATCATTGGGTTGTCAG 58.052 45.455 0.00 0.00 0.00 3.51
3087 4426 3.328931 ACTCAGATCATTGGGTTGTCAGT 59.671 43.478 0.00 0.00 0.00 3.41
3088 4427 4.532126 ACTCAGATCATTGGGTTGTCAGTA 59.468 41.667 0.00 0.00 0.00 2.74
3089 4428 5.013079 ACTCAGATCATTGGGTTGTCAGTAA 59.987 40.000 0.00 0.00 0.00 2.24
3090 4429 5.245531 TCAGATCATTGGGTTGTCAGTAAC 58.754 41.667 0.00 0.00 0.00 2.50
3091 4430 5.013079 TCAGATCATTGGGTTGTCAGTAACT 59.987 40.000 0.00 0.00 0.00 2.24
3092 4431 5.352569 CAGATCATTGGGTTGTCAGTAACTC 59.647 44.000 0.00 0.00 0.00 3.01
3093 4432 4.974645 TCATTGGGTTGTCAGTAACTCT 57.025 40.909 0.00 0.00 32.22 3.24
3094 4433 5.304686 TCATTGGGTTGTCAGTAACTCTT 57.695 39.130 0.00 0.00 32.22 2.85
3095 4434 6.428083 TCATTGGGTTGTCAGTAACTCTTA 57.572 37.500 0.00 0.00 32.22 2.10
3096 4435 7.016153 TCATTGGGTTGTCAGTAACTCTTAT 57.984 36.000 0.00 0.00 32.22 1.73
3097 4436 7.458397 TCATTGGGTTGTCAGTAACTCTTATT 58.542 34.615 0.00 0.00 32.22 1.40
3098 4437 7.390440 TCATTGGGTTGTCAGTAACTCTTATTG 59.610 37.037 0.00 0.00 32.22 1.90
3099 4438 6.428083 TGGGTTGTCAGTAACTCTTATTGA 57.572 37.500 0.00 0.00 32.22 2.57
3100 4439 7.016153 TGGGTTGTCAGTAACTCTTATTGAT 57.984 36.000 0.00 0.00 34.91 2.57
3101 4440 8.141298 TGGGTTGTCAGTAACTCTTATTGATA 57.859 34.615 0.00 0.00 34.91 2.15
3102 4441 8.598916 TGGGTTGTCAGTAACTCTTATTGATAA 58.401 33.333 0.00 0.00 34.91 1.75
3103 4442 9.614792 GGGTTGTCAGTAACTCTTATTGATAAT 57.385 33.333 1.83 0.00 36.16 1.28
3132 4471 8.985805 ACTTTTAGAACCACTTTGTAAGTATCG 58.014 33.333 0.00 0.00 40.46 2.92
3133 4472 9.199982 CTTTTAGAACCACTTTGTAAGTATCGA 57.800 33.333 0.00 0.00 40.46 3.59
3134 4473 9.715121 TTTTAGAACCACTTTGTAAGTATCGAT 57.285 29.630 2.16 2.16 40.46 3.59
3176 4515 6.428083 TGGGTTGTCAGTAACTCTTATTGA 57.572 37.500 0.00 0.00 32.22 2.57
3228 4567 7.184067 AGTATCGATCCCTTTAACTCAGTTT 57.816 36.000 0.00 0.00 0.00 2.66
3562 4901 5.761234 TCCAGTTACATGAATTATAACCGGC 59.239 40.000 0.00 0.00 29.83 6.13
3616 4955 7.494298 GGAGACTATCTGAGAAAAGGAATTCAC 59.506 40.741 7.93 0.00 0.00 3.18
3682 5021 8.433893 CGCTCAATCTTAGTTGATATGATGAAG 58.566 37.037 0.00 0.00 37.47 3.02
3714 5053 7.597288 AATTTTACTGCCAAGGTTTCTAGTT 57.403 32.000 0.00 0.00 0.00 2.24
3768 5107 7.390162 TGCTGTGTAAGTTGACATGATATTCAA 59.610 33.333 0.00 0.00 0.00 2.69
3818 5157 6.265196 TGAAAACTGGCATATCAAAGAGTGTT 59.735 34.615 0.00 0.00 0.00 3.32
3819 5158 7.446931 TGAAAACTGGCATATCAAAGAGTGTTA 59.553 33.333 0.00 0.00 0.00 2.41
3821 5160 7.559590 AACTGGCATATCAAAGAGTGTTATC 57.440 36.000 0.00 0.00 0.00 1.75
3822 5161 6.058183 ACTGGCATATCAAAGAGTGTTATCC 58.942 40.000 0.00 0.00 0.00 2.59
3823 5162 6.000246 TGGCATATCAAAGAGTGTTATCCA 58.000 37.500 0.00 0.00 0.00 3.41
3824 5163 6.422333 TGGCATATCAAAGAGTGTTATCCAA 58.578 36.000 0.00 0.00 0.00 3.53
3952 5298 4.207891 TGTCTTCCATCTTAACTGAGGC 57.792 45.455 0.00 0.00 0.00 4.70
4047 5393 5.115480 TGTGAAGCGAGCATCATGTAATTA 58.885 37.500 6.29 0.00 33.17 1.40
4050 5396 5.817296 TGAAGCGAGCATCATGTAATTACTT 59.183 36.000 16.33 7.62 33.17 2.24
4051 5397 5.663795 AGCGAGCATCATGTAATTACTTG 57.336 39.130 20.21 20.21 33.17 3.16
4099 5445 9.522804 CCAAGTGAACTTTACTAGTATCTCATC 57.477 37.037 2.79 0.59 35.54 2.92
4135 5483 5.186409 GTCTTACAGGTATTACACAGACCCA 59.814 44.000 0.00 0.00 33.40 4.51
4159 5507 0.032540 GGACCTTTTGGCAGTGCAAG 59.967 55.000 18.61 11.84 45.59 4.01
4235 5583 8.705594 AGCAGTACAACAAGGTATCATAACTAT 58.294 33.333 0.00 0.00 0.00 2.12
4290 5639 3.503748 AGCATGCAGACAACTTTAGTTCC 59.496 43.478 21.98 0.00 35.83 3.62
4331 5680 7.475137 AAAATTCCCATATCGTTTGGAGAAA 57.525 32.000 3.18 0.00 36.26 2.52
4414 5764 6.507900 GCTAACAGTCTTAGCTATGACATCA 58.492 40.000 30.60 17.09 42.91 3.07
4415 5765 6.980978 GCTAACAGTCTTAGCTATGACATCAA 59.019 38.462 30.60 17.58 42.91 2.57
4416 5766 7.492669 GCTAACAGTCTTAGCTATGACATCAAA 59.507 37.037 30.60 16.56 42.91 2.69
4417 5767 7.840342 AACAGTCTTAGCTATGACATCAAAG 57.160 36.000 30.60 18.88 35.81 2.77
4418 5768 5.814705 ACAGTCTTAGCTATGACATCAAAGC 59.185 40.000 30.60 10.60 35.81 3.51
4445 5795 6.451393 TCAAAGCCATTTATGTGGTGTTTAC 58.549 36.000 0.00 0.00 41.47 2.01
4460 5810 1.877443 GTTTACGGACATGCACCAGTT 59.123 47.619 9.64 0.00 0.00 3.16
4521 5871 3.952323 ACACAGTACGCAGACCTACATAT 59.048 43.478 0.00 0.00 0.00 1.78
4536 5886 5.889289 ACCTACATATAAAATTTGGTGCCGT 59.111 36.000 0.00 0.00 0.00 5.68
4688 6047 3.952323 GGTTATGGAAGAAAAGGTAGGGC 59.048 47.826 0.00 0.00 0.00 5.19
4710 6069 3.728076 TCTCGACCCTTTCCATATTCG 57.272 47.619 0.00 0.00 0.00 3.34
4837 6196 1.900337 GCTACCACCTCTACACCCCTT 60.900 57.143 0.00 0.00 0.00 3.95
4839 6198 0.492276 ACCACCTCTACACCCCTTCT 59.508 55.000 0.00 0.00 0.00 2.85
4858 6217 0.976641 TGAGGTTGAAGCGGTCATCT 59.023 50.000 0.00 0.00 35.70 2.90
4917 6279 6.001449 TCTTGTATTCCCATGAACCCTAAG 57.999 41.667 0.00 0.00 32.13 2.18
5049 6412 5.756347 TCATTTGTTTGTAGCACTAAGACGT 59.244 36.000 0.00 0.00 0.00 4.34
5050 6413 6.259167 TCATTTGTTTGTAGCACTAAGACGTT 59.741 34.615 0.00 0.00 0.00 3.99
5051 6414 5.398176 TTGTTTGTAGCACTAAGACGTTG 57.602 39.130 0.00 0.00 0.00 4.10
5070 6433 6.262601 ACGTTGTGTCACCAAAAAGAATTAG 58.737 36.000 0.00 0.00 0.00 1.73
5137 6502 3.967203 GCATTTGTGTGCATTTGGTTT 57.033 38.095 0.00 0.00 44.43 3.27
5148 6513 5.982516 TGTGCATTTGGTTTGTAAACATCTC 59.017 36.000 9.44 0.00 40.63 2.75
5149 6514 6.183360 TGTGCATTTGGTTTGTAAACATCTCT 60.183 34.615 9.44 0.00 40.63 3.10
5150 6515 7.013750 TGTGCATTTGGTTTGTAAACATCTCTA 59.986 33.333 9.44 0.00 40.63 2.43
5151 6516 7.326063 GTGCATTTGGTTTGTAAACATCTCTAC 59.674 37.037 9.44 0.00 40.63 2.59
5152 6517 7.230510 TGCATTTGGTTTGTAAACATCTCTACT 59.769 33.333 9.44 0.00 40.63 2.57
5153 6518 7.538678 GCATTTGGTTTGTAAACATCTCTACTG 59.461 37.037 9.44 0.00 40.63 2.74
5157 6522 9.616156 TTGGTTTGTAAACATCTCTACTGTTAA 57.384 29.630 9.44 0.00 40.63 2.01
5165 6530 5.342866 ACATCTCTACTGTTAAGGGGAGTT 58.657 41.667 0.00 0.00 31.94 3.01
5184 6549 2.157834 TGGTGTTTGTACTAGTGGCG 57.842 50.000 5.39 0.00 0.00 5.69
5189 6554 3.310501 GTGTTTGTACTAGTGGCGTGTTT 59.689 43.478 5.39 0.00 0.00 2.83
5190 6555 3.310227 TGTTTGTACTAGTGGCGTGTTTG 59.690 43.478 5.39 0.00 0.00 2.93
5191 6556 2.157834 TGTACTAGTGGCGTGTTTGG 57.842 50.000 5.39 0.00 0.00 3.28
5192 6557 1.413445 TGTACTAGTGGCGTGTTTGGT 59.587 47.619 5.39 0.00 0.00 3.67
5193 6558 2.158928 TGTACTAGTGGCGTGTTTGGTT 60.159 45.455 5.39 0.00 0.00 3.67
5194 6559 1.305201 ACTAGTGGCGTGTTTGGTTG 58.695 50.000 0.00 0.00 0.00 3.77
5195 6560 0.040425 CTAGTGGCGTGTTTGGTTGC 60.040 55.000 0.00 0.00 0.00 4.17
5196 6561 0.464735 TAGTGGCGTGTTTGGTTGCT 60.465 50.000 0.00 0.00 0.00 3.91
5197 6562 1.140804 GTGGCGTGTTTGGTTGCTT 59.859 52.632 0.00 0.00 0.00 3.91
5198 6563 1.140589 TGGCGTGTTTGGTTGCTTG 59.859 52.632 0.00 0.00 0.00 4.01
5199 6564 2.237066 GGCGTGTTTGGTTGCTTGC 61.237 57.895 0.00 0.00 0.00 4.01
5200 6565 1.518133 GCGTGTTTGGTTGCTTGCA 60.518 52.632 0.00 0.00 0.00 4.08
5201 6566 0.875474 GCGTGTTTGGTTGCTTGCAT 60.875 50.000 0.00 0.00 0.00 3.96
5202 6567 1.569708 CGTGTTTGGTTGCTTGCATT 58.430 45.000 0.00 0.00 0.00 3.56
5203 6568 2.736978 CGTGTTTGGTTGCTTGCATTA 58.263 42.857 0.00 0.00 0.00 1.90
5204 6569 3.119291 CGTGTTTGGTTGCTTGCATTAA 58.881 40.909 0.00 0.00 0.00 1.40
5205 6570 3.182173 CGTGTTTGGTTGCTTGCATTAAG 59.818 43.478 0.00 0.00 39.49 1.85
5217 6582 1.732417 GCATTAAGCTCTGCCAGGCC 61.732 60.000 9.64 0.00 41.15 5.19
5218 6583 0.106819 CATTAAGCTCTGCCAGGCCT 60.107 55.000 9.64 0.00 0.00 5.19
5290 6687 0.177836 TTGCTCGCATTAGCTAGGCA 59.822 50.000 16.64 8.97 43.19 4.75
5311 6708 1.539827 CGTGTGGGAAGAAATTGACCC 59.460 52.381 0.00 0.00 42.37 4.46
5314 6711 2.235891 GTGGGAAGAAATTGACCCGTT 58.764 47.619 0.00 0.00 44.70 4.44
5315 6712 2.626266 GTGGGAAGAAATTGACCCGTTT 59.374 45.455 0.00 0.00 44.70 3.60
5316 6713 2.625790 TGGGAAGAAATTGACCCGTTTG 59.374 45.455 0.00 0.00 44.70 2.93
5317 6714 2.029380 GGGAAGAAATTGACCCGTTTGG 60.029 50.000 0.00 0.00 41.37 3.28
5351 6748 2.132996 CCAAAAGCTGGCCCACACA 61.133 57.895 0.00 0.00 38.76 3.72
5358 6755 1.178534 GCTGGCCCACACAAAGCTTA 61.179 55.000 0.00 0.00 0.00 3.09
5363 6760 1.068434 GCCCACACAAAGCTTAAAGCA 59.932 47.619 0.00 0.00 45.56 3.91
5367 6764 3.550842 CCACACAAAGCTTAAAGCACCTC 60.551 47.826 0.00 0.00 45.56 3.85
5378 6775 2.282745 GCACCTCTTGCCTGGCTT 60.283 61.111 21.03 0.00 46.63 4.35
5381 6778 0.538057 CACCTCTTGCCTGGCTTTGA 60.538 55.000 21.03 13.43 0.00 2.69
5388 6785 0.605319 TGCCTGGCTTTGAGGTAACG 60.605 55.000 21.03 0.00 46.39 3.18
5391 6788 0.321653 CTGGCTTTGAGGTAACGGCT 60.322 55.000 0.00 0.00 46.39 5.52
5396 6793 2.488153 GCTTTGAGGTAACGGCTGAATT 59.512 45.455 0.00 0.00 46.39 2.17
5400 6797 0.679960 AGGTAACGGCTGAATTGGCC 60.680 55.000 0.00 0.00 45.57 5.36
5401 6798 0.679960 GGTAACGGCTGAATTGGCCT 60.680 55.000 3.32 2.90 46.73 5.19
5413 6810 3.582208 TGAATTGGCCTTTTATGCAACCT 59.418 39.130 3.32 0.00 0.00 3.50
5455 6895 1.253593 ACAGAGCTCACGCATGGAGA 61.254 55.000 17.77 0.00 39.10 3.71
5504 6944 8.021898 TGGAAAACTGAAGATGGAAAAGATTT 57.978 30.769 0.00 0.00 0.00 2.17
5506 6946 8.768019 GGAAAACTGAAGATGGAAAAGATTTTG 58.232 33.333 0.00 0.00 0.00 2.44
5508 6948 5.464168 ACTGAAGATGGAAAAGATTTTGCG 58.536 37.500 5.30 0.00 40.78 4.85
5515 6955 7.601856 AGATGGAAAAGATTTTGCGTAATCAA 58.398 30.769 11.70 0.00 40.78 2.57
5543 6983 5.744171 TCTGCCAAAACAGAGCTAATATGA 58.256 37.500 0.00 0.00 41.72 2.15
5565 7005 5.724854 TGAAAAGTCTACTAGTATTGGGCCT 59.275 40.000 4.53 0.00 0.00 5.19
5571 7011 3.917324 ACTAGTATTGGGCCTAGGCTA 57.083 47.619 32.18 19.23 41.60 3.93
5581 7021 2.885266 GGGCCTAGGCTAATGCTTTTAC 59.115 50.000 32.18 11.41 41.60 2.01
5583 7023 3.951680 GGCCTAGGCTAATGCTTTTACAA 59.048 43.478 32.18 0.00 41.60 2.41
5626 7103 2.031120 TGTGCCAAGGAAAAAGACCAG 58.969 47.619 0.00 0.00 0.00 4.00
5637 7114 2.514458 AAAGACCAGGCATACCCTTG 57.486 50.000 0.00 0.00 43.06 3.61
5722 7199 6.937436 TTTTCTCCTACGCTCTTTTCTTTT 57.063 33.333 0.00 0.00 0.00 2.27
5763 7240 0.914417 TGCCTAGCCCTAGCAAACCT 60.914 55.000 0.00 0.00 43.56 3.50
5765 7242 1.489230 GCCTAGCCCTAGCAAACCTAA 59.511 52.381 0.00 0.00 43.56 2.69
5835 7312 1.996292 CACGAAAGCGAGGAATCAGA 58.004 50.000 0.00 0.00 41.64 3.27
5836 7313 2.544685 CACGAAAGCGAGGAATCAGAT 58.455 47.619 0.00 0.00 41.64 2.90
5837 7314 2.537625 CACGAAAGCGAGGAATCAGATC 59.462 50.000 0.00 0.00 41.64 2.75
5838 7315 2.428890 ACGAAAGCGAGGAATCAGATCT 59.571 45.455 0.00 0.00 41.64 2.75
5839 7316 3.049206 CGAAAGCGAGGAATCAGATCTC 58.951 50.000 0.00 0.00 40.82 2.75
5840 7317 3.489908 CGAAAGCGAGGAATCAGATCTCA 60.490 47.826 0.00 0.00 40.82 3.27
5841 7318 4.437239 GAAAGCGAGGAATCAGATCTCAA 58.563 43.478 0.00 0.00 0.00 3.02
5842 7319 3.451141 AGCGAGGAATCAGATCTCAAC 57.549 47.619 0.00 0.00 0.00 3.18
5843 7320 2.102252 AGCGAGGAATCAGATCTCAACC 59.898 50.000 0.00 0.00 0.00 3.77
5844 7321 2.804933 GCGAGGAATCAGATCTCAACCC 60.805 54.545 0.00 0.00 0.00 4.11
5845 7322 2.224161 CGAGGAATCAGATCTCAACCCC 60.224 54.545 0.00 0.00 0.00 4.95
5846 7323 2.774234 GAGGAATCAGATCTCAACCCCA 59.226 50.000 0.00 0.00 0.00 4.96
5847 7324 3.192944 AGGAATCAGATCTCAACCCCAA 58.807 45.455 0.00 0.00 0.00 4.12
5848 7325 3.054065 AGGAATCAGATCTCAACCCCAAC 60.054 47.826 0.00 0.00 0.00 3.77
5849 7326 3.308402 GGAATCAGATCTCAACCCCAACA 60.308 47.826 0.00 0.00 0.00 3.33
5850 7327 4.335416 GAATCAGATCTCAACCCCAACAA 58.665 43.478 0.00 0.00 0.00 2.83
5851 7328 3.140325 TCAGATCTCAACCCCAACAAC 57.860 47.619 0.00 0.00 0.00 3.32
5852 7329 2.441375 TCAGATCTCAACCCCAACAACA 59.559 45.455 0.00 0.00 0.00 3.33
5853 7330 3.074390 TCAGATCTCAACCCCAACAACAT 59.926 43.478 0.00 0.00 0.00 2.71
5854 7331 3.441572 CAGATCTCAACCCCAACAACATC 59.558 47.826 0.00 0.00 0.00 3.06
5855 7332 3.074390 AGATCTCAACCCCAACAACATCA 59.926 43.478 0.00 0.00 0.00 3.07
5856 7333 3.524095 TCTCAACCCCAACAACATCAT 57.476 42.857 0.00 0.00 0.00 2.45
5857 7334 3.420893 TCTCAACCCCAACAACATCATC 58.579 45.455 0.00 0.00 0.00 2.92
5858 7335 2.158559 TCAACCCCAACAACATCATCG 58.841 47.619 0.00 0.00 0.00 3.84
5859 7336 0.887933 AACCCCAACAACATCATCGC 59.112 50.000 0.00 0.00 0.00 4.58
5860 7337 0.965363 ACCCCAACAACATCATCGCC 60.965 55.000 0.00 0.00 0.00 5.54
5861 7338 0.964860 CCCCAACAACATCATCGCCA 60.965 55.000 0.00 0.00 0.00 5.69
5862 7339 1.105457 CCCAACAACATCATCGCCAT 58.895 50.000 0.00 0.00 0.00 4.40
5863 7340 1.066002 CCCAACAACATCATCGCCATC 59.934 52.381 0.00 0.00 0.00 3.51
5864 7341 1.744522 CCAACAACATCATCGCCATCA 59.255 47.619 0.00 0.00 0.00 3.07
5865 7342 2.478370 CCAACAACATCATCGCCATCAC 60.478 50.000 0.00 0.00 0.00 3.06
5866 7343 2.112380 ACAACATCATCGCCATCACA 57.888 45.000 0.00 0.00 0.00 3.58
5867 7344 1.739466 ACAACATCATCGCCATCACAC 59.261 47.619 0.00 0.00 0.00 3.82
5868 7345 2.011947 CAACATCATCGCCATCACACT 58.988 47.619 0.00 0.00 0.00 3.55
5869 7346 2.408271 ACATCATCGCCATCACACTT 57.592 45.000 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.175716 CGTTAAGCTCTAATTTAAGGGTTCTTG 58.824 37.037 0.00 0.00 34.59 3.02
1 2 7.148289 GCGTTAAGCTCTAATTTAAGGGTTCTT 60.148 37.037 0.00 0.00 44.04 2.52
2 3 6.315642 GCGTTAAGCTCTAATTTAAGGGTTCT 59.684 38.462 0.00 0.00 44.04 3.01
3 4 6.484540 GCGTTAAGCTCTAATTTAAGGGTTC 58.515 40.000 0.00 0.00 44.04 3.62
4 5 5.064325 CGCGTTAAGCTCTAATTTAAGGGTT 59.936 40.000 0.00 0.00 45.59 4.11
5 6 4.569564 CGCGTTAAGCTCTAATTTAAGGGT 59.430 41.667 0.00 0.00 45.59 4.34
6 7 4.569564 ACGCGTTAAGCTCTAATTTAAGGG 59.430 41.667 5.58 0.00 45.59 3.95
7 8 5.713822 ACGCGTTAAGCTCTAATTTAAGG 57.286 39.130 5.58 0.00 45.59 2.69
8 9 7.675270 TCTACGCGTTAAGCTCTAATTTAAG 57.325 36.000 20.78 2.05 45.59 1.85
9 10 7.756722 ACTTCTACGCGTTAAGCTCTAATTTAA 59.243 33.333 20.78 0.00 45.59 1.52
10 11 7.253422 ACTTCTACGCGTTAAGCTCTAATTTA 58.747 34.615 20.78 0.00 45.59 1.40
11 12 6.098017 ACTTCTACGCGTTAAGCTCTAATTT 58.902 36.000 20.78 0.55 45.59 1.82
12 13 5.648572 ACTTCTACGCGTTAAGCTCTAATT 58.351 37.500 20.78 1.29 45.59 1.40
13 14 5.246145 ACTTCTACGCGTTAAGCTCTAAT 57.754 39.130 20.78 2.01 45.59 1.73
14 15 4.691860 ACTTCTACGCGTTAAGCTCTAA 57.308 40.909 20.78 0.00 45.59 2.10
15 16 4.872691 ACTACTTCTACGCGTTAAGCTCTA 59.127 41.667 20.78 9.41 45.59 2.43
16 17 3.688673 ACTACTTCTACGCGTTAAGCTCT 59.311 43.478 20.78 8.75 45.59 4.09
17 18 4.013582 ACTACTTCTACGCGTTAAGCTC 57.986 45.455 20.78 0.00 45.59 4.09
18 19 4.633565 AGTACTACTTCTACGCGTTAAGCT 59.366 41.667 20.78 13.96 45.59 3.74
19 20 4.727655 CAGTACTACTTCTACGCGTTAAGC 59.272 45.833 20.78 8.55 43.95 3.09
20 21 5.862811 ACAGTACTACTTCTACGCGTTAAG 58.137 41.667 20.78 23.09 0.00 1.85
21 22 5.862924 ACAGTACTACTTCTACGCGTTAA 57.137 39.130 20.78 12.00 0.00 2.01
22 23 7.539712 AATACAGTACTACTTCTACGCGTTA 57.460 36.000 20.78 2.75 0.00 3.18
23 24 6.428385 AATACAGTACTACTTCTACGCGTT 57.572 37.500 20.78 0.00 0.00 4.84
24 25 7.539712 TTAATACAGTACTACTTCTACGCGT 57.460 36.000 19.17 19.17 0.00 6.01
36 37 9.216117 GGCGGATTCAATATTTAATACAGTACT 57.784 33.333 5.61 0.00 0.00 2.73
37 38 8.995220 TGGCGGATTCAATATTTAATACAGTAC 58.005 33.333 5.61 0.00 0.00 2.73
38 39 8.995220 GTGGCGGATTCAATATTTAATACAGTA 58.005 33.333 5.61 0.00 0.00 2.74
39 40 7.040686 GGTGGCGGATTCAATATTTAATACAGT 60.041 37.037 5.61 0.00 0.00 3.55
40 41 7.174946 AGGTGGCGGATTCAATATTTAATACAG 59.825 37.037 5.61 0.70 0.00 2.74
41 42 7.001674 AGGTGGCGGATTCAATATTTAATACA 58.998 34.615 5.61 0.00 0.00 2.29
42 43 7.174253 TGAGGTGGCGGATTCAATATTTAATAC 59.826 37.037 0.00 0.00 0.00 1.89
43 44 7.227873 TGAGGTGGCGGATTCAATATTTAATA 58.772 34.615 0.00 0.00 0.00 0.98
44 45 6.068010 TGAGGTGGCGGATTCAATATTTAAT 58.932 36.000 0.00 0.00 0.00 1.40
45 46 5.441500 TGAGGTGGCGGATTCAATATTTAA 58.558 37.500 0.00 0.00 0.00 1.52
46 47 5.042463 TGAGGTGGCGGATTCAATATTTA 57.958 39.130 0.00 0.00 0.00 1.40
47 48 3.897239 TGAGGTGGCGGATTCAATATTT 58.103 40.909 0.00 0.00 0.00 1.40
48 49 3.576078 TGAGGTGGCGGATTCAATATT 57.424 42.857 0.00 0.00 0.00 1.28
49 50 3.117888 AGTTGAGGTGGCGGATTCAATAT 60.118 43.478 0.00 0.00 32.76 1.28
50 51 2.238646 AGTTGAGGTGGCGGATTCAATA 59.761 45.455 0.00 0.00 32.76 1.90
51 52 1.004745 AGTTGAGGTGGCGGATTCAAT 59.995 47.619 0.00 0.00 32.76 2.57
52 53 0.400213 AGTTGAGGTGGCGGATTCAA 59.600 50.000 0.00 0.00 0.00 2.69
53 54 0.400213 AAGTTGAGGTGGCGGATTCA 59.600 50.000 0.00 0.00 0.00 2.57
54 55 1.534729 AAAGTTGAGGTGGCGGATTC 58.465 50.000 0.00 0.00 0.00 2.52
55 56 1.613437 CAAAAGTTGAGGTGGCGGATT 59.387 47.619 0.00 0.00 0.00 3.01
56 57 1.202879 TCAAAAGTTGAGGTGGCGGAT 60.203 47.619 0.00 0.00 34.08 4.18
57 58 0.181587 TCAAAAGTTGAGGTGGCGGA 59.818 50.000 0.00 0.00 34.08 5.54
58 59 1.068333 CATCAAAAGTTGAGGTGGCGG 60.068 52.381 0.00 0.00 43.98 6.13
59 60 1.879380 TCATCAAAAGTTGAGGTGGCG 59.121 47.619 2.94 0.00 43.98 5.69
60 61 4.525912 ATTCATCAAAAGTTGAGGTGGC 57.474 40.909 2.94 0.00 43.98 5.01
82 83 9.620660 CTTGCGTATTCTTGGTTAAACTTATTT 57.379 29.630 0.00 0.00 0.00 1.40
83 84 8.789762 ACTTGCGTATTCTTGGTTAAACTTATT 58.210 29.630 0.00 0.00 0.00 1.40
84 85 8.331730 ACTTGCGTATTCTTGGTTAAACTTAT 57.668 30.769 0.00 0.00 0.00 1.73
85 86 7.441760 TGACTTGCGTATTCTTGGTTAAACTTA 59.558 33.333 0.00 0.00 0.00 2.24
86 87 6.261381 TGACTTGCGTATTCTTGGTTAAACTT 59.739 34.615 0.00 0.00 0.00 2.66
87 88 5.761234 TGACTTGCGTATTCTTGGTTAAACT 59.239 36.000 0.00 0.00 0.00 2.66
88 89 5.992729 TGACTTGCGTATTCTTGGTTAAAC 58.007 37.500 0.00 0.00 0.00 2.01
89 90 6.653320 AGATGACTTGCGTATTCTTGGTTAAA 59.347 34.615 0.00 0.00 0.00 1.52
90 91 6.170506 AGATGACTTGCGTATTCTTGGTTAA 58.829 36.000 0.00 0.00 0.00 2.01
91 92 5.730550 AGATGACTTGCGTATTCTTGGTTA 58.269 37.500 0.00 0.00 0.00 2.85
92 93 4.579869 AGATGACTTGCGTATTCTTGGTT 58.420 39.130 0.00 0.00 0.00 3.67
93 94 4.184629 GAGATGACTTGCGTATTCTTGGT 58.815 43.478 0.00 0.00 0.00 3.67
94 95 4.183865 TGAGATGACTTGCGTATTCTTGG 58.816 43.478 0.00 0.00 0.00 3.61
95 96 5.784750 TTGAGATGACTTGCGTATTCTTG 57.215 39.130 0.00 0.00 0.00 3.02
96 97 6.676456 GCAATTGAGATGACTTGCGTATTCTT 60.676 38.462 10.34 0.00 35.20 2.52
97 98 5.220739 GCAATTGAGATGACTTGCGTATTCT 60.221 40.000 10.34 0.00 35.20 2.40
98 99 4.966366 GCAATTGAGATGACTTGCGTATTC 59.034 41.667 10.34 0.00 35.20 1.75
99 100 4.395854 TGCAATTGAGATGACTTGCGTATT 59.604 37.500 10.34 0.00 45.31 1.89
100 101 3.940852 TGCAATTGAGATGACTTGCGTAT 59.059 39.130 10.34 0.00 45.31 3.06
101 102 3.333804 TGCAATTGAGATGACTTGCGTA 58.666 40.909 10.34 0.00 45.31 4.42
102 103 2.153645 TGCAATTGAGATGACTTGCGT 58.846 42.857 10.34 0.00 45.31 5.24
103 104 2.905959 TGCAATTGAGATGACTTGCG 57.094 45.000 10.34 0.00 45.31 4.85
104 105 4.170292 ACTTGCAATTGAGATGACTTGC 57.830 40.909 10.34 0.00 43.25 4.01
105 106 5.765176 TCAACTTGCAATTGAGATGACTTG 58.235 37.500 10.34 0.00 32.34 3.16
114 115 1.603456 TCCGCTCAACTTGCAATTGA 58.397 45.000 10.34 17.56 34.89 2.57
115 116 2.642139 ATCCGCTCAACTTGCAATTG 57.358 45.000 0.00 7.39 0.00 2.32
116 117 3.316308 GGATATCCGCTCAACTTGCAATT 59.684 43.478 5.86 0.00 0.00 2.32
117 118 2.880890 GGATATCCGCTCAACTTGCAAT 59.119 45.455 5.86 0.00 0.00 3.56
118 119 2.288666 GGATATCCGCTCAACTTGCAA 58.711 47.619 5.86 0.00 0.00 4.08
119 120 1.475034 GGGATATCCGCTCAACTTGCA 60.475 52.381 15.69 0.00 36.71 4.08
120 121 1.230324 GGGATATCCGCTCAACTTGC 58.770 55.000 15.69 0.00 36.71 4.01
121 122 1.884235 GGGGATATCCGCTCAACTTG 58.116 55.000 27.18 0.00 44.66 3.16
145 146 4.562552 CGCCCCTTAATGGTGTTCATTTTT 60.563 41.667 0.00 0.00 43.04 1.94
146 147 3.056179 CGCCCCTTAATGGTGTTCATTTT 60.056 43.478 0.00 0.00 43.04 1.82
147 148 2.495669 CGCCCCTTAATGGTGTTCATTT 59.504 45.455 0.00 0.00 43.04 2.32
148 149 2.099405 CGCCCCTTAATGGTGTTCATT 58.901 47.619 0.00 0.00 46.79 2.57
149 150 1.283613 TCGCCCCTTAATGGTGTTCAT 59.716 47.619 5.05 0.00 37.79 2.57
150 151 0.693622 TCGCCCCTTAATGGTGTTCA 59.306 50.000 5.05 0.00 34.90 3.18
151 152 1.828979 TTCGCCCCTTAATGGTGTTC 58.171 50.000 5.05 0.00 34.90 3.18
152 153 2.375146 GATTCGCCCCTTAATGGTGTT 58.625 47.619 5.05 0.00 34.90 3.32
153 154 1.409661 GGATTCGCCCCTTAATGGTGT 60.410 52.381 5.05 0.00 34.90 4.16
154 155 1.318576 GGATTCGCCCCTTAATGGTG 58.681 55.000 0.00 0.00 34.62 4.17
155 156 0.179029 CGGATTCGCCCCTTAATGGT 60.179 55.000 0.00 0.00 0.00 3.55
156 157 0.179029 ACGGATTCGCCCCTTAATGG 60.179 55.000 0.00 0.00 40.63 3.16
157 158 2.413837 CTACGGATTCGCCCCTTAATG 58.586 52.381 0.00 0.00 40.63 1.90
158 159 1.346722 CCTACGGATTCGCCCCTTAAT 59.653 52.381 0.00 0.00 40.63 1.40
159 160 0.754472 CCTACGGATTCGCCCCTTAA 59.246 55.000 0.00 0.00 40.63 1.85
160 161 0.106066 TCCTACGGATTCGCCCCTTA 60.106 55.000 0.00 0.00 40.63 2.69
161 162 0.979187 TTCCTACGGATTCGCCCCTT 60.979 55.000 0.00 0.00 40.63 3.95
162 163 1.382146 TTCCTACGGATTCGCCCCT 60.382 57.895 0.00 0.00 40.63 4.79
163 164 1.069258 CTTCCTACGGATTCGCCCC 59.931 63.158 0.00 0.00 40.63 5.80
164 165 0.462789 TTCTTCCTACGGATTCGCCC 59.537 55.000 0.00 0.00 40.63 6.13
165 166 1.136500 ACTTCTTCCTACGGATTCGCC 59.864 52.381 0.00 0.00 40.63 5.54
166 167 2.159282 TGACTTCTTCCTACGGATTCGC 60.159 50.000 0.00 0.00 40.63 4.70
167 168 3.777465 TGACTTCTTCCTACGGATTCG 57.223 47.619 0.00 0.00 43.02 3.34
168 169 5.326200 TCTTGACTTCTTCCTACGGATTC 57.674 43.478 0.00 0.00 0.00 2.52
182 183 2.695147 CAAAAGCCCACCTTCTTGACTT 59.305 45.455 0.00 0.00 31.99 3.01
186 187 2.031120 TCACAAAAGCCCACCTTCTTG 58.969 47.619 0.00 0.00 31.99 3.02
214 215 1.691196 TTTGAGGGTGTTTCTGCAGG 58.309 50.000 15.13 0.00 0.00 4.85
259 260 1.679139 CCCTTGCAGGCGAATTGATA 58.321 50.000 0.00 0.00 32.73 2.15
325 327 5.178797 TGGAAGTTCTTGATTCGATTCTCC 58.821 41.667 8.63 5.90 0.00 3.71
382 384 1.084370 GTCTCGATTTGGGGTCGCTG 61.084 60.000 0.00 0.00 38.88 5.18
406 408 2.417339 GTATAGGACGATTGCTGCGA 57.583 50.000 0.00 0.00 0.00 5.10
437 440 1.893919 GCTCGAGGCTTTCTCAGGGT 61.894 60.000 15.58 0.00 42.55 4.34
465 468 2.905736 CCAATCTTGGTCCCCAAATGTT 59.094 45.455 0.55 0.00 43.44 2.71
489 492 3.937706 CCAGGTGCTCTATCAAAACTCTG 59.062 47.826 0.00 0.00 0.00 3.35
492 495 3.620966 GCTCCAGGTGCTCTATCAAAACT 60.621 47.826 6.23 0.00 0.00 2.66
520 523 1.303317 GCACGGTCCCTTCACCATT 60.303 57.895 0.00 0.00 36.01 3.16
630 641 0.394352 CCCTTCACAATTCCCTCCCG 60.394 60.000 0.00 0.00 0.00 5.14
640 651 2.597217 CCTTGGCGCCCTTCACAA 60.597 61.111 26.77 9.46 0.00 3.33
677 692 5.067023 CAGGCCTGAAGAAGATCCAATAAAC 59.933 44.000 29.88 0.00 0.00 2.01
699 723 0.034896 AAGTAGTGGCCCGTTCACAG 59.965 55.000 0.00 0.00 37.58 3.66
758 782 0.324738 TCTGGTCCACTAGGCCTCAG 60.325 60.000 9.68 9.04 33.72 3.35
803 1950 2.002018 TTTTCCGGGCCTCCAACACT 62.002 55.000 0.84 0.00 0.00 3.55
804 1951 1.524008 CTTTTCCGGGCCTCCAACAC 61.524 60.000 0.84 0.00 0.00 3.32
805 1952 1.228429 CTTTTCCGGGCCTCCAACA 60.228 57.895 0.84 0.00 0.00 3.33
806 1953 2.636412 GCTTTTCCGGGCCTCCAAC 61.636 63.158 0.84 0.00 0.00 3.77
807 1954 2.282887 GCTTTTCCGGGCCTCCAA 60.283 61.111 0.84 0.00 0.00 3.53
808 1955 4.360405 GGCTTTTCCGGGCCTCCA 62.360 66.667 11.81 0.00 44.48 3.86
814 1961 0.036306 ACTGTAGTGGCTTTTCCGGG 59.964 55.000 0.00 0.00 37.80 5.73
815 1962 1.439679 GACTGTAGTGGCTTTTCCGG 58.560 55.000 0.00 0.00 37.80 5.14
926 2143 4.994756 GGGTGGGTGCTTGGTGGG 62.995 72.222 0.00 0.00 0.00 4.61
962 2179 2.448926 TCGGAATTCGAAGCACTTGA 57.551 45.000 3.35 0.00 45.86 3.02
997 2214 2.273370 TACCTCGTGAGAAACATCGC 57.727 50.000 0.00 0.00 41.32 4.58
1065 2282 1.445410 CGTCGGCGACAGATCCAAA 60.445 57.895 35.62 0.00 41.33 3.28
1124 2341 1.601477 TCGTACTCCGTCCTGCACA 60.601 57.895 0.00 0.00 37.94 4.57
1125 2342 1.154073 GTCGTACTCCGTCCTGCAC 60.154 63.158 0.00 0.00 37.94 4.57
1248 2469 3.302344 CAGGCCCAAAACCCCACG 61.302 66.667 0.00 0.00 0.00 4.94
1273 2494 1.869767 CCGCAGTCTCATCCTAAATGC 59.130 52.381 0.00 0.00 0.00 3.56
1337 2559 5.883685 ACAGAAGGATCAGCATCATAAGA 57.116 39.130 0.00 0.00 0.00 2.10
1359 2581 2.378038 GAGCCCAACTGCAATCCATAA 58.622 47.619 0.00 0.00 0.00 1.90
1531 2755 6.351711 CCCATTAAGAGATCATCAACAGTCA 58.648 40.000 0.00 0.00 0.00 3.41
1551 2775 3.175594 AGAATGTGGACATTTTGCCCAT 58.824 40.909 6.46 0.00 45.72 4.00
1552 2776 2.607499 AGAATGTGGACATTTTGCCCA 58.393 42.857 6.46 0.00 45.72 5.36
1555 2779 7.067494 ACCTATCTAAGAATGTGGACATTTTGC 59.933 37.037 6.46 0.00 45.72 3.68
1556 2780 8.511604 ACCTATCTAAGAATGTGGACATTTTG 57.488 34.615 6.46 0.00 45.72 2.44
1560 2784 5.905331 TGGACCTATCTAAGAATGTGGACAT 59.095 40.000 0.00 0.00 38.41 3.06
1615 2839 7.800155 TCAACATCTTGACAGTTGAAACATA 57.200 32.000 14.10 0.00 45.95 2.29
1616 2840 6.698008 TCAACATCTTGACAGTTGAAACAT 57.302 33.333 14.10 0.00 45.95 2.71
1622 2846 8.509690 AGAACAATATCAACATCTTGACAGTTG 58.490 33.333 9.90 9.90 39.28 3.16
1623 2847 8.627208 AGAACAATATCAACATCTTGACAGTT 57.373 30.769 0.00 0.00 39.28 3.16
1624 2848 8.627208 AAGAACAATATCAACATCTTGACAGT 57.373 30.769 0.00 0.00 39.28 3.55
1625 2849 8.724229 TGAAGAACAATATCAACATCTTGACAG 58.276 33.333 0.00 0.00 39.28 3.51
1626 2850 8.620116 TGAAGAACAATATCAACATCTTGACA 57.380 30.769 0.00 0.00 39.28 3.58
1627 2851 8.180267 CCTGAAGAACAATATCAACATCTTGAC 58.820 37.037 0.00 0.00 39.28 3.18
1628 2852 7.337689 CCCTGAAGAACAATATCAACATCTTGA 59.662 37.037 0.00 0.00 40.77 3.02
1629 2853 7.121759 ACCCTGAAGAACAATATCAACATCTTG 59.878 37.037 0.00 0.00 0.00 3.02
1637 2861 8.504811 TGGATATACCCTGAAGAACAATATCA 57.495 34.615 0.00 0.00 38.00 2.15
1694 2918 9.685828 GAATGCATAAGTTAGGTTAAACAACAA 57.314 29.630 0.00 0.00 0.00 2.83
1748 2972 9.667107 CATTATTTTTCCAGTCTGGTAAGTAGA 57.333 33.333 18.65 2.81 39.03 2.59
1850 3078 2.094026 TGTCCAGTGATCCTTGACGATG 60.094 50.000 0.00 0.00 38.40 3.84
1878 3106 4.241590 TGTGCACAAGATTCAACCAATC 57.758 40.909 19.28 0.00 41.37 2.67
1883 3111 5.291614 ACAAAACATGTGCACAAGATTCAAC 59.708 36.000 27.42 0.00 41.93 3.18
1884 3112 5.417811 ACAAAACATGTGCACAAGATTCAA 58.582 33.333 27.42 0.00 41.93 2.69
2032 3266 4.270325 CAGGCAGTTATCTTTTACCGCTAC 59.730 45.833 0.00 0.00 0.00 3.58
2079 3313 8.990163 AACCTCAAGGAATAAAAGACAACTAA 57.010 30.769 2.30 0.00 38.94 2.24
2086 3320 6.789268 TGATGGAACCTCAAGGAATAAAAGA 58.211 36.000 2.30 0.00 38.94 2.52
2344 3663 4.534500 TGAAGTTAACCAATAGAGGGCAGA 59.466 41.667 0.88 0.00 0.00 4.26
2380 3699 9.551734 CATATGAGAACCTATGATTCTGTTTGA 57.448 33.333 0.00 0.00 36.53 2.69
2426 3745 4.711846 TCACAGATAGCTTGTGTGGTAGAT 59.288 41.667 14.95 0.00 41.62 1.98
2507 3826 8.637986 ACCTTTTGTCATTGCATTAGTAGAAAA 58.362 29.630 0.00 0.00 0.00 2.29
2543 3862 1.815003 CCTGTTTCCCATCTTCTGCAC 59.185 52.381 0.00 0.00 0.00 4.57
2645 3980 7.100458 TCCTCCGTAGTTATACTTTGTTACC 57.900 40.000 0.00 0.00 0.00 2.85
2646 3981 8.864024 GTTTCCTCCGTAGTTATACTTTGTTAC 58.136 37.037 0.00 0.00 0.00 2.50
2649 3984 7.039504 TCAGTTTCCTCCGTAGTTATACTTTGT 60.040 37.037 0.00 0.00 0.00 2.83
2663 3999 3.815401 ACAAAGATGTTCAGTTTCCTCCG 59.185 43.478 0.00 0.00 35.91 4.63
2671 4007 8.667463 CAAAAATTTCCAACAAAGATGTTCAGT 58.333 29.630 0.00 0.00 46.78 3.41
2729 4068 8.907222 AACTTTTCATAAATTTTGGCAGTCAT 57.093 26.923 0.00 0.00 0.00 3.06
2777 4116 3.119280 AGCAAAAGCCAAACTAAACACGT 60.119 39.130 0.00 0.00 0.00 4.49
2778 4117 3.242712 CAGCAAAAGCCAAACTAAACACG 59.757 43.478 0.00 0.00 0.00 4.49
2785 4124 8.071177 AGATAATAATCAGCAAAAGCCAAACT 57.929 30.769 0.00 0.00 34.28 2.66
2852 4191 7.715657 ACAAAATTGCTTTGACTAGTTCATGA 58.284 30.769 0.00 0.00 46.35 3.07
2910 4249 7.589587 TGTGTAAAATACAGAAAAATGTGAGCG 59.410 33.333 0.00 0.00 39.77 5.03
2937 4276 9.656323 AGAACCTTACTCTATGATATTGGTACA 57.344 33.333 0.00 0.00 0.00 2.90
3032 4371 2.496899 ACTTACAAGCTGGGTCCATG 57.503 50.000 0.00 0.00 0.00 3.66
3058 4397 4.860022 ACCCAATGATCTGAGTTAAAGGG 58.140 43.478 0.00 0.00 38.52 3.95
3059 4398 5.711976 ACAACCCAATGATCTGAGTTAAAGG 59.288 40.000 0.00 0.00 0.00 3.11
3060 4399 6.430925 TGACAACCCAATGATCTGAGTTAAAG 59.569 38.462 0.00 0.00 0.00 1.85
3061 4400 6.303054 TGACAACCCAATGATCTGAGTTAAA 58.697 36.000 0.00 0.00 0.00 1.52
3062 4401 5.875224 TGACAACCCAATGATCTGAGTTAA 58.125 37.500 0.00 0.00 0.00 2.01
3063 4402 5.013079 ACTGACAACCCAATGATCTGAGTTA 59.987 40.000 0.00 0.00 0.00 2.24
3064 4403 4.202503 ACTGACAACCCAATGATCTGAGTT 60.203 41.667 0.00 0.00 0.00 3.01
3065 4404 3.328931 ACTGACAACCCAATGATCTGAGT 59.671 43.478 0.00 0.00 0.00 3.41
3066 4405 3.947868 ACTGACAACCCAATGATCTGAG 58.052 45.455 0.00 0.00 0.00 3.35
3067 4406 5.013079 AGTTACTGACAACCCAATGATCTGA 59.987 40.000 0.00 0.00 0.00 3.27
3068 4407 5.248640 AGTTACTGACAACCCAATGATCTG 58.751 41.667 0.00 0.00 0.00 2.90
3069 4408 5.249393 AGAGTTACTGACAACCCAATGATCT 59.751 40.000 0.00 0.00 0.00 2.75
3070 4409 5.491982 AGAGTTACTGACAACCCAATGATC 58.508 41.667 0.00 0.00 0.00 2.92
3071 4410 5.505181 AGAGTTACTGACAACCCAATGAT 57.495 39.130 0.00 0.00 0.00 2.45
3072 4411 4.974645 AGAGTTACTGACAACCCAATGA 57.025 40.909 0.00 0.00 0.00 2.57
3073 4412 7.390440 TCAATAAGAGTTACTGACAACCCAATG 59.610 37.037 0.00 0.00 0.00 2.82
3074 4413 7.458397 TCAATAAGAGTTACTGACAACCCAAT 58.542 34.615 0.00 0.00 0.00 3.16
3075 4414 6.833041 TCAATAAGAGTTACTGACAACCCAA 58.167 36.000 0.00 0.00 0.00 4.12
3076 4415 6.428083 TCAATAAGAGTTACTGACAACCCA 57.572 37.500 0.00 0.00 0.00 4.51
3077 4416 9.614792 ATTATCAATAAGAGTTACTGACAACCC 57.385 33.333 0.00 0.00 0.00 4.11
3106 4445 8.985805 CGATACTTACAAAGTGGTTCTAAAAGT 58.014 33.333 2.59 0.00 42.84 2.66
3107 4446 9.199982 TCGATACTTACAAAGTGGTTCTAAAAG 57.800 33.333 2.59 0.00 42.84 2.27
3108 4447 9.715121 ATCGATACTTACAAAGTGGTTCTAAAA 57.285 29.630 0.00 0.00 42.84 1.52
3109 4448 9.362539 GATCGATACTTACAAAGTGGTTCTAAA 57.637 33.333 0.00 0.00 42.84 1.85
3110 4449 7.977853 GGATCGATACTTACAAAGTGGTTCTAA 59.022 37.037 0.00 0.00 42.84 2.10
3111 4450 7.417116 GGGATCGATACTTACAAAGTGGTTCTA 60.417 40.741 7.75 0.00 42.84 2.10
3112 4451 6.338937 GGATCGATACTTACAAAGTGGTTCT 58.661 40.000 0.00 0.00 42.84 3.01
3113 4452 5.522824 GGGATCGATACTTACAAAGTGGTTC 59.477 44.000 7.75 0.00 42.84 3.62
3114 4453 5.189145 AGGGATCGATACTTACAAAGTGGTT 59.811 40.000 7.75 0.00 42.84 3.67
3115 4454 4.715297 AGGGATCGATACTTACAAAGTGGT 59.285 41.667 7.75 0.00 42.84 4.16
3116 4455 5.277857 AGGGATCGATACTTACAAAGTGG 57.722 43.478 7.75 0.00 42.84 4.00
3117 4456 8.601476 GTTAAAGGGATCGATACTTACAAAGTG 58.399 37.037 7.75 0.00 42.84 3.16
3118 4457 8.537858 AGTTAAAGGGATCGATACTTACAAAGT 58.462 33.333 7.75 6.93 45.40 2.66
3119 4458 8.943909 AGTTAAAGGGATCGATACTTACAAAG 57.056 34.615 7.75 0.00 0.00 2.77
3120 4459 8.533657 TGAGTTAAAGGGATCGATACTTACAAA 58.466 33.333 7.75 4.59 0.00 2.83
3121 4460 8.070034 TGAGTTAAAGGGATCGATACTTACAA 57.930 34.615 7.75 6.43 0.00 2.41
3122 4461 7.341256 ACTGAGTTAAAGGGATCGATACTTACA 59.659 37.037 7.75 0.85 0.00 2.41
3123 4462 7.714703 ACTGAGTTAAAGGGATCGATACTTAC 58.285 38.462 7.75 7.24 0.00 2.34
3124 4463 7.893124 ACTGAGTTAAAGGGATCGATACTTA 57.107 36.000 7.75 0.00 0.00 2.24
3125 4464 6.793505 ACTGAGTTAAAGGGATCGATACTT 57.206 37.500 7.75 8.23 0.00 2.24
3126 4465 6.380274 TGAACTGAGTTAAAGGGATCGATACT 59.620 38.462 7.75 0.57 0.00 2.12
3127 4466 6.570692 TGAACTGAGTTAAAGGGATCGATAC 58.429 40.000 0.00 0.00 0.00 2.24
3128 4467 6.785337 TGAACTGAGTTAAAGGGATCGATA 57.215 37.500 0.00 0.00 0.00 2.92
3129 4468 5.677319 TGAACTGAGTTAAAGGGATCGAT 57.323 39.130 0.00 0.00 0.00 3.59
3130 4469 5.677319 ATGAACTGAGTTAAAGGGATCGA 57.323 39.130 0.00 0.00 0.00 3.59
3131 4470 5.065218 CCAATGAACTGAGTTAAAGGGATCG 59.935 44.000 0.00 0.00 0.00 3.69
3132 4471 5.358160 CCCAATGAACTGAGTTAAAGGGATC 59.642 44.000 15.17 0.00 34.49 3.36
3133 4472 5.222337 ACCCAATGAACTGAGTTAAAGGGAT 60.222 40.000 23.21 10.06 36.44 3.85
3134 4473 4.105697 ACCCAATGAACTGAGTTAAAGGGA 59.894 41.667 23.21 0.00 36.44 4.20
3228 4567 8.598916 TCAATAAGAGTTACTGACAACCCAATA 58.401 33.333 0.00 0.00 0.00 1.90
3456 4795 7.336931 ACGTGACAATCTAGAAAAAGGCAATAT 59.663 33.333 0.00 0.00 0.00 1.28
3457 4796 6.653320 ACGTGACAATCTAGAAAAAGGCAATA 59.347 34.615 0.00 0.00 0.00 1.90
3458 4797 5.473504 ACGTGACAATCTAGAAAAAGGCAAT 59.526 36.000 0.00 0.00 0.00 3.56
3459 4798 4.819630 ACGTGACAATCTAGAAAAAGGCAA 59.180 37.500 0.00 0.00 0.00 4.52
3562 4901 8.561738 AAAATGTAGGTGTACAGGAACTAATG 57.438 34.615 0.00 0.00 42.53 1.90
3682 5021 9.435688 AAACCTTGGCAGTAAAATTTGATTATC 57.564 29.630 0.00 0.00 0.00 1.75
3714 5053 9.877178 TTGGAATTTTGAAAGTAAAGCAACTAA 57.123 25.926 0.00 0.00 0.00 2.24
3731 5070 5.852282 ACTTACACAGCAGTTGGAATTTT 57.148 34.783 0.00 0.00 0.00 1.82
3818 5157 2.818751 AAACCCCGAAGCATTGGATA 57.181 45.000 0.00 0.00 0.00 2.59
3819 5158 1.937191 AAAACCCCGAAGCATTGGAT 58.063 45.000 0.00 0.00 0.00 3.41
3821 5160 4.340950 ACATATAAAACCCCGAAGCATTGG 59.659 41.667 0.00 0.00 0.00 3.16
3822 5161 5.514274 ACATATAAAACCCCGAAGCATTG 57.486 39.130 0.00 0.00 0.00 2.82
3823 5162 7.833285 ATAACATATAAAACCCCGAAGCATT 57.167 32.000 0.00 0.00 0.00 3.56
3824 5163 9.528489 AATATAACATATAAAACCCCGAAGCAT 57.472 29.630 0.00 0.00 0.00 3.79
4047 5393 7.566760 TTTGTAAACTGATCATCACACAAGT 57.433 32.000 0.00 0.00 0.00 3.16
4050 5396 5.048782 GGCTTTGTAAACTGATCATCACACA 60.049 40.000 0.00 0.00 0.00 3.72
4051 5397 5.048782 TGGCTTTGTAAACTGATCATCACAC 60.049 40.000 0.00 0.00 0.00 3.82
4135 5483 1.000896 CTGCCAAAAGGTCCCCGAT 60.001 57.895 0.00 0.00 0.00 4.18
4168 5516 0.745845 CTTCAGAGCCCGACCCAATG 60.746 60.000 0.00 0.00 0.00 2.82
4235 5583 6.449956 ACTTATGGTCTATCCCCTGTTTAGA 58.550 40.000 0.00 0.00 34.77 2.10
4279 5628 5.883673 TGTTGTTAGTGCTGGAACTAAAGTT 59.116 36.000 3.03 0.00 42.68 2.66
4290 5639 6.146021 GGGAATTTTTCATGTTGTTAGTGCTG 59.854 38.462 0.00 0.00 0.00 4.41
4331 5680 2.154567 ATGACCCATGCAGCAGATTT 57.845 45.000 0.00 0.00 0.00 2.17
4409 5759 2.250031 TGGCTTTGATGGCTTTGATGT 58.750 42.857 0.00 0.00 0.00 3.06
4410 5760 3.536956 ATGGCTTTGATGGCTTTGATG 57.463 42.857 0.00 0.00 0.00 3.07
4411 5761 4.563140 AAATGGCTTTGATGGCTTTGAT 57.437 36.364 0.00 0.00 32.02 2.57
4412 5762 5.046448 ACATAAATGGCTTTGATGGCTTTGA 60.046 36.000 13.42 0.00 32.02 2.69
4413 5763 5.064198 CACATAAATGGCTTTGATGGCTTTG 59.936 40.000 13.42 1.41 32.02 2.77
4414 5764 5.180271 CACATAAATGGCTTTGATGGCTTT 58.820 37.500 13.42 0.00 0.00 3.51
4415 5765 4.383335 CCACATAAATGGCTTTGATGGCTT 60.383 41.667 13.42 0.00 31.52 4.35
4416 5766 3.133362 CCACATAAATGGCTTTGATGGCT 59.867 43.478 13.42 0.00 31.52 4.75
4417 5767 3.118665 ACCACATAAATGGCTTTGATGGC 60.119 43.478 13.42 0.00 44.33 4.40
4418 5768 4.081531 ACACCACATAAATGGCTTTGATGG 60.082 41.667 13.42 8.72 44.33 3.51
4445 5795 0.238289 GTTCAACTGGTGCATGTCCG 59.762 55.000 0.00 0.00 0.00 4.79
4460 5810 4.524714 AGACTTCTAAGCTGTAGCAGTTCA 59.475 41.667 6.65 0.00 45.16 3.18
4521 5871 3.802948 ACAACACGGCACCAAATTTTA 57.197 38.095 0.00 0.00 0.00 1.52
4536 5886 2.862541 ACTGAAAGCATGGCTACAACA 58.137 42.857 0.00 0.00 38.25 3.33
4688 6047 3.990469 CGAATATGGAAAGGGTCGAGATG 59.010 47.826 0.00 0.00 0.00 2.90
4698 6057 4.976731 CCTACGAGTGACGAATATGGAAAG 59.023 45.833 0.00 0.00 45.77 2.62
4710 6069 6.197842 CGGTATTTATTGAACCTACGAGTGAC 59.802 42.308 0.00 0.00 0.00 3.67
4837 6196 0.976641 ATGACCGCTTCAACCTCAGA 59.023 50.000 0.00 0.00 37.92 3.27
4839 6198 0.976641 AGATGACCGCTTCAACCTCA 59.023 50.000 0.00 0.00 37.92 3.86
4858 6217 1.610624 GGCAATCCTTCACAACCTCGA 60.611 52.381 0.00 0.00 0.00 4.04
4917 6279 4.697352 ACAGAGTTCATAGTTCATTGTGCC 59.303 41.667 0.00 0.00 0.00 5.01
5049 6412 8.185505 GTGTACTAATTCTTTTTGGTGACACAA 58.814 33.333 8.08 0.00 42.67 3.33
5050 6413 7.337184 TGTGTACTAATTCTTTTTGGTGACACA 59.663 33.333 8.08 0.00 42.67 3.72
5051 6414 7.699566 TGTGTACTAATTCTTTTTGGTGACAC 58.300 34.615 0.00 0.00 42.67 3.67
5070 6433 7.919690 TGCTAGATGCTGAAAATTATGTGTAC 58.080 34.615 0.00 0.00 43.37 2.90
5079 6442 3.181503 CGCACTTGCTAGATGCTGAAAAT 60.182 43.478 15.92 0.00 43.37 1.82
5090 6453 3.066900 AGTGATACCTACGCACTTGCTAG 59.933 47.826 0.00 0.00 39.69 3.42
5110 6475 1.364901 GCACACAAATGCAGCCAGT 59.635 52.632 0.00 0.00 45.39 4.00
5111 6476 4.255126 GCACACAAATGCAGCCAG 57.745 55.556 0.00 0.00 45.39 4.85
5137 6502 6.727231 TCCCCTTAACAGTAGAGATGTTTACA 59.273 38.462 0.00 0.00 41.08 2.41
5148 6513 3.326880 ACACCAACTCCCCTTAACAGTAG 59.673 47.826 0.00 0.00 0.00 2.57
5149 6514 3.320129 ACACCAACTCCCCTTAACAGTA 58.680 45.455 0.00 0.00 0.00 2.74
5150 6515 2.132686 ACACCAACTCCCCTTAACAGT 58.867 47.619 0.00 0.00 0.00 3.55
5151 6516 2.951229 ACACCAACTCCCCTTAACAG 57.049 50.000 0.00 0.00 0.00 3.16
5152 6517 3.292460 CAAACACCAACTCCCCTTAACA 58.708 45.455 0.00 0.00 0.00 2.41
5153 6518 3.293337 ACAAACACCAACTCCCCTTAAC 58.707 45.455 0.00 0.00 0.00 2.01
5157 6522 2.132686 AGTACAAACACCAACTCCCCT 58.867 47.619 0.00 0.00 0.00 4.79
5165 6530 1.413445 ACGCCACTAGTACAAACACCA 59.587 47.619 0.00 0.00 0.00 4.17
5184 6549 4.713854 CTTAATGCAAGCAACCAAACAC 57.286 40.909 0.00 0.00 0.00 3.32
5195 6560 1.404391 CCTGGCAGAGCTTAATGCAAG 59.596 52.381 17.94 15.91 44.37 4.01
5196 6561 1.466856 CCTGGCAGAGCTTAATGCAA 58.533 50.000 17.94 8.62 44.37 4.08
5197 6562 1.033746 GCCTGGCAGAGCTTAATGCA 61.034 55.000 17.94 0.00 44.37 3.96
5198 6563 1.732308 GCCTGGCAGAGCTTAATGC 59.268 57.895 17.94 4.03 41.80 3.56
5199 6564 0.106819 AGGCCTGGCAGAGCTTAATG 60.107 55.000 22.05 0.00 0.00 1.90
5200 6565 0.106819 CAGGCCTGGCAGAGCTTAAT 60.107 55.000 26.14 3.40 0.00 1.40
5201 6566 1.300963 CAGGCCTGGCAGAGCTTAA 59.699 57.895 26.14 0.00 0.00 1.85
5202 6567 1.920325 ACAGGCCTGGCAGAGCTTA 60.920 57.895 35.42 0.00 34.19 3.09
5203 6568 3.255397 ACAGGCCTGGCAGAGCTT 61.255 61.111 35.42 10.21 34.19 3.74
5204 6569 4.031129 CACAGGCCTGGCAGAGCT 62.031 66.667 35.42 11.03 34.19 4.09
5217 6582 0.109132 GCCAATTTCTTCCCGCACAG 60.109 55.000 0.00 0.00 0.00 3.66
5218 6583 1.531739 GGCCAATTTCTTCCCGCACA 61.532 55.000 0.00 0.00 0.00 4.57
5290 6687 2.227194 GGTCAATTTCTTCCCACACGT 58.773 47.619 0.00 0.00 0.00 4.49
5311 6708 1.357334 CGACCCAACCAACCAAACG 59.643 57.895 0.00 0.00 0.00 3.60
5314 6711 0.250989 GATCCGACCCAACCAACCAA 60.251 55.000 0.00 0.00 0.00 3.67
5315 6712 1.377229 GATCCGACCCAACCAACCA 59.623 57.895 0.00 0.00 0.00 3.67
5316 6713 1.378119 GGATCCGACCCAACCAACC 60.378 63.158 0.00 0.00 0.00 3.77
5317 6714 0.250989 TTGGATCCGACCCAACCAAC 60.251 55.000 7.39 0.00 38.64 3.77
5318 6715 0.478942 TTTGGATCCGACCCAACCAA 59.521 50.000 7.39 0.00 42.80 3.67
5319 6716 0.478942 TTTTGGATCCGACCCAACCA 59.521 50.000 7.39 0.00 42.80 3.67
5320 6717 1.173913 CTTTTGGATCCGACCCAACC 58.826 55.000 7.39 0.00 42.80 3.77
5321 6718 0.526211 GCTTTTGGATCCGACCCAAC 59.474 55.000 7.39 0.00 42.80 3.77
5322 6719 0.404040 AGCTTTTGGATCCGACCCAA 59.596 50.000 7.39 0.00 41.53 4.12
5363 6760 0.251077 CTCAAAGCCAGGCAAGAGGT 60.251 55.000 15.80 0.00 0.00 3.85
5367 6764 1.541588 GTTACCTCAAAGCCAGGCAAG 59.458 52.381 15.80 5.20 33.84 4.01
5372 6769 0.321653 AGCCGTTACCTCAAAGCCAG 60.322 55.000 0.00 0.00 0.00 4.85
5378 6775 2.432444 CCAATTCAGCCGTTACCTCAA 58.568 47.619 0.00 0.00 0.00 3.02
5381 6778 0.679960 GGCCAATTCAGCCGTTACCT 60.680 55.000 0.00 0.00 41.41 3.08
5391 6788 3.582208 AGGTTGCATAAAAGGCCAATTCA 59.418 39.130 5.01 0.00 0.00 2.57
5396 6793 2.300956 TCAGGTTGCATAAAAGGCCA 57.699 45.000 5.01 0.00 0.00 5.36
5455 6895 3.977326 ACCAGACCTCTTTCCTTCTTTCT 59.023 43.478 0.00 0.00 0.00 2.52
5504 6944 4.257731 TGGCAGAATAGTTGATTACGCAA 58.742 39.130 0.00 0.00 0.00 4.85
5506 6946 4.875544 TTGGCAGAATAGTTGATTACGC 57.124 40.909 0.00 0.00 0.00 4.42
5508 6948 7.816640 TCTGTTTTGGCAGAATAGTTGATTAC 58.183 34.615 12.97 0.00 41.93 1.89
5515 6955 4.026356 AGCTCTGTTTTGGCAGAATAGT 57.974 40.909 12.97 0.00 43.92 2.12
5543 6983 6.326843 CCTAGGCCCAATACTAGTAGACTTTT 59.673 42.308 8.85 0.00 35.93 2.27
5587 7027 5.102313 GCACATAAGCGGCTTTTTCTATTT 58.898 37.500 21.72 0.00 0.00 1.40
5589 7029 3.066760 GGCACATAAGCGGCTTTTTCTAT 59.933 43.478 21.72 4.76 34.64 1.98
5598 7038 1.312371 TTCCTTGGCACATAAGCGGC 61.312 55.000 0.00 0.00 39.30 6.53
5626 7103 3.686016 CCCACATATACAAGGGTATGCC 58.314 50.000 0.00 0.00 40.40 4.40
5637 7114 5.546621 ATCGGCCATATACCCACATATAC 57.453 43.478 2.24 0.00 0.00 1.47
5677 7154 7.614124 AAAAGTAACGTAAGGTTGTGAAAGA 57.386 32.000 0.00 0.00 46.39 2.52
5748 7225 4.921644 AACTTTAGGTTTGCTAGGGCTA 57.078 40.909 0.00 0.00 39.59 3.93
5785 7262 3.302156 CCGACCGTTTTTCAATGCAAAAC 60.302 43.478 10.42 10.42 39.68 2.43
5835 7312 3.524095 TGATGTTGTTGGGGTTGAGAT 57.476 42.857 0.00 0.00 0.00 2.75
5836 7313 3.420893 GATGATGTTGTTGGGGTTGAGA 58.579 45.455 0.00 0.00 0.00 3.27
5837 7314 2.162208 CGATGATGTTGTTGGGGTTGAG 59.838 50.000 0.00 0.00 0.00 3.02
5838 7315 2.158559 CGATGATGTTGTTGGGGTTGA 58.841 47.619 0.00 0.00 0.00 3.18
5839 7316 1.402720 GCGATGATGTTGTTGGGGTTG 60.403 52.381 0.00 0.00 0.00 3.77
5840 7317 0.887933 GCGATGATGTTGTTGGGGTT 59.112 50.000 0.00 0.00 0.00 4.11
5841 7318 0.965363 GGCGATGATGTTGTTGGGGT 60.965 55.000 0.00 0.00 0.00 4.95
5842 7319 0.964860 TGGCGATGATGTTGTTGGGG 60.965 55.000 0.00 0.00 0.00 4.96
5843 7320 1.066002 GATGGCGATGATGTTGTTGGG 59.934 52.381 0.00 0.00 0.00 4.12
5844 7321 1.744522 TGATGGCGATGATGTTGTTGG 59.255 47.619 0.00 0.00 0.00 3.77
5845 7322 2.162008 TGTGATGGCGATGATGTTGTTG 59.838 45.455 0.00 0.00 0.00 3.33
5846 7323 2.162208 GTGTGATGGCGATGATGTTGTT 59.838 45.455 0.00 0.00 0.00 2.83
5847 7324 1.739466 GTGTGATGGCGATGATGTTGT 59.261 47.619 0.00 0.00 0.00 3.32
5848 7325 2.011947 AGTGTGATGGCGATGATGTTG 58.988 47.619 0.00 0.00 0.00 3.33
5849 7326 2.408271 AGTGTGATGGCGATGATGTT 57.592 45.000 0.00 0.00 0.00 2.71
5850 7327 2.408271 AAGTGTGATGGCGATGATGT 57.592 45.000 0.00 0.00 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.