Multiple sequence alignment - TraesCS4A01G166000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G166000 chr4A 100.000 2920 0 0 1 2920 398500003 398497084 0.000000e+00 5393
1 TraesCS4A01G166000 chr4A 97.417 1936 42 6 703 2633 329170870 329172802 0.000000e+00 3291
2 TraesCS4A01G166000 chr4A 92.136 852 45 8 699 1545 615184990 615184156 0.000000e+00 1182
3 TraesCS4A01G166000 chr4A 96.119 335 13 0 2586 2920 329172794 329173128 5.500000e-152 547
4 TraesCS4A01G166000 chr4A 91.755 376 30 1 1 375 533593716 533594091 3.330000e-144 521
5 TraesCS4A01G166000 chr4A 90.691 376 34 1 1 375 28811271 28811646 1.560000e-137 499
6 TraesCS4A01G166000 chr4A 91.613 155 13 0 221 375 398490505 398490351 6.340000e-52 215
7 TraesCS4A01G166000 chr2A 97.436 2223 52 3 702 2920 176886329 176884108 0.000000e+00 3784
8 TraesCS4A01G166000 chr2A 96.848 1935 56 4 703 2633 642253574 642251641 0.000000e+00 3230
9 TraesCS4A01G166000 chr2A 93.770 305 19 0 2588 2892 642251647 642251343 2.650000e-125 459
10 TraesCS4A01G166000 chr2A 88.710 310 30 4 386 694 758922388 758922083 9.880000e-100 374
11 TraesCS4A01G166000 chr1B 89.137 2283 117 48 701 2896 549889859 549887621 0.000000e+00 2721
12 TraesCS4A01G166000 chr3A 89.203 991 48 16 1963 2920 581852728 581853692 0.000000e+00 1182
13 TraesCS4A01G166000 chr3A 76.386 1118 190 53 700 1768 194791114 194792206 4.280000e-148 534
14 TraesCS4A01G166000 chr3A 90.000 270 14 4 702 971 581852446 581852702 1.300000e-88 337
15 TraesCS4A01G166000 chr6D 94.058 690 32 4 702 1386 438886553 438885868 0.000000e+00 1038
16 TraesCS4A01G166000 chr7D 76.646 1109 194 51 702 1768 535786006 535784921 1.180000e-153 553
17 TraesCS4A01G166000 chr7B 91.467 375 32 0 1 375 608221456 608221082 1.550000e-142 516
18 TraesCS4A01G166000 chr7B 76.448 794 143 31 1148 1919 198147970 198147199 9.810000e-105 390
19 TraesCS4A01G166000 chr7B 78.656 253 48 4 2671 2918 571520922 571520671 2.330000e-36 163
20 TraesCS4A01G166000 chr5B 89.037 374 38 3 2 375 435644224 435643854 7.370000e-126 460
21 TraesCS4A01G166000 chr6A 88.961 308 28 5 388 694 527380258 527379956 2.750000e-100 375
22 TraesCS4A01G166000 chr6A 88.636 308 29 5 388 694 527457055 527456753 1.280000e-98 370
23 TraesCS4A01G166000 chr6A 91.057 123 11 0 248 370 204311949 204311827 1.800000e-37 167
24 TraesCS4A01G166000 chr2B 88.571 315 25 8 388 695 772052783 772053093 3.550000e-99 372
25 TraesCS4A01G166000 chr2B 80.478 251 41 5 2670 2913 485325720 485325471 4.970000e-43 185
26 TraesCS4A01G166000 chr2B 79.365 252 40 9 2670 2913 245733997 245734244 1.800000e-37 167
27 TraesCS4A01G166000 chr2D 88.927 289 27 4 407 694 629202333 629202049 4.630000e-93 351
28 TraesCS4A01G166000 chr2D 78.571 280 51 6 2586 2860 5091513 5091788 2.990000e-40 176
29 TraesCS4A01G166000 chr1D 81.569 255 38 6 2611 2860 298453765 298453515 4.930000e-48 202
30 TraesCS4A01G166000 chr5D 93.000 100 6 1 256 354 152548144 152548243 8.430000e-31 145
31 TraesCS4A01G166000 chr1A 91.000 100 8 1 256 354 144764200 144764299 1.830000e-27 134
32 TraesCS4A01G166000 chr3B 90.099 101 7 2 256 354 57216079 57216178 8.490000e-26 128
33 TraesCS4A01G166000 chr3B 74.312 327 64 9 2586 2896 1161365 1161687 1.420000e-23 121


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G166000 chr4A 398497084 398500003 2919 True 5393.0 5393 100.0000 1 2920 1 chr4A.!!$R2 2919
1 TraesCS4A01G166000 chr4A 329170870 329173128 2258 False 1919.0 3291 96.7680 703 2920 2 chr4A.!!$F3 2217
2 TraesCS4A01G166000 chr4A 615184156 615184990 834 True 1182.0 1182 92.1360 699 1545 1 chr4A.!!$R3 846
3 TraesCS4A01G166000 chr2A 176884108 176886329 2221 True 3784.0 3784 97.4360 702 2920 1 chr2A.!!$R1 2218
4 TraesCS4A01G166000 chr2A 642251343 642253574 2231 True 1844.5 3230 95.3090 703 2892 2 chr2A.!!$R3 2189
5 TraesCS4A01G166000 chr1B 549887621 549889859 2238 True 2721.0 2721 89.1370 701 2896 1 chr1B.!!$R1 2195
6 TraesCS4A01G166000 chr3A 581852446 581853692 1246 False 759.5 1182 89.6015 702 2920 2 chr3A.!!$F2 2218
7 TraesCS4A01G166000 chr3A 194791114 194792206 1092 False 534.0 534 76.3860 700 1768 1 chr3A.!!$F1 1068
8 TraesCS4A01G166000 chr6D 438885868 438886553 685 True 1038.0 1038 94.0580 702 1386 1 chr6D.!!$R1 684
9 TraesCS4A01G166000 chr7D 535784921 535786006 1085 True 553.0 553 76.6460 702 1768 1 chr7D.!!$R1 1066
10 TraesCS4A01G166000 chr7B 198147199 198147970 771 True 390.0 390 76.4480 1148 1919 1 chr7B.!!$R1 771

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
387 388 0.033504 ACGTTTCACTGGATGCGTCT 59.966 50.0 5.77 0.0 31.28 4.18 F
568 569 0.107831 AACTTTAGCTGACCACCGCA 59.892 50.0 0.00 0.0 0.00 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1661 1743 5.784578 TTTTTCCCTACTTTTTCTCTGCC 57.215 39.13 0.00 0.00 0.00 4.85 R
2118 2259 5.994668 AGTGATGAGAGTTTCAGAAAGTTCC 59.005 40.00 4.66 1.47 39.68 3.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.114616 CAGTGAACTGCGCCCGAG 61.115 66.667 4.18 0.00 37.15 4.63
20 21 4.314440 TGAACTGCGCCCGAGCTT 62.314 61.111 4.18 0.00 38.13 3.74
21 22 3.491652 GAACTGCGCCCGAGCTTC 61.492 66.667 4.18 0.00 38.13 3.86
29 30 3.382832 CCCGAGCTTCCGTCCACT 61.383 66.667 0.00 0.00 0.00 4.00
30 31 2.125912 CCGAGCTTCCGTCCACTG 60.126 66.667 0.00 0.00 0.00 3.66
31 32 2.811317 CGAGCTTCCGTCCACTGC 60.811 66.667 0.00 0.00 0.00 4.40
32 33 2.435059 GAGCTTCCGTCCACTGCC 60.435 66.667 0.00 0.00 0.00 4.85
33 34 2.925170 AGCTTCCGTCCACTGCCT 60.925 61.111 0.00 0.00 0.00 4.75
34 35 2.743928 GCTTCCGTCCACTGCCTG 60.744 66.667 0.00 0.00 0.00 4.85
35 36 2.743928 CTTCCGTCCACTGCCTGC 60.744 66.667 0.00 0.00 0.00 4.85
36 37 3.535629 CTTCCGTCCACTGCCTGCA 62.536 63.158 0.00 0.00 0.00 4.41
46 47 1.511305 CTGCCTGCAGCTCATTTGG 59.489 57.895 8.66 0.00 44.23 3.28
47 48 1.228644 TGCCTGCAGCTCATTTGGT 60.229 52.632 8.66 0.00 44.23 3.67
48 49 0.828762 TGCCTGCAGCTCATTTGGTT 60.829 50.000 8.66 0.00 44.23 3.67
49 50 0.108945 GCCTGCAGCTCATTTGGTTC 60.109 55.000 8.66 0.00 38.99 3.62
50 51 1.250328 CCTGCAGCTCATTTGGTTCA 58.750 50.000 8.66 0.00 0.00 3.18
51 52 1.614903 CCTGCAGCTCATTTGGTTCAA 59.385 47.619 8.66 0.00 0.00 2.69
52 53 2.352421 CCTGCAGCTCATTTGGTTCAAG 60.352 50.000 8.66 0.00 0.00 3.02
53 54 2.295349 CTGCAGCTCATTTGGTTCAAGT 59.705 45.455 0.00 0.00 0.00 3.16
54 55 2.694628 TGCAGCTCATTTGGTTCAAGTT 59.305 40.909 0.00 0.00 0.00 2.66
55 56 3.132646 TGCAGCTCATTTGGTTCAAGTTT 59.867 39.130 0.00 0.00 0.00 2.66
56 57 3.737774 GCAGCTCATTTGGTTCAAGTTTC 59.262 43.478 0.00 0.00 0.00 2.78
57 58 4.737352 GCAGCTCATTTGGTTCAAGTTTCA 60.737 41.667 0.00 0.00 0.00 2.69
58 59 4.741676 CAGCTCATTTGGTTCAAGTTTCAC 59.258 41.667 0.00 0.00 0.00 3.18
59 60 3.730715 GCTCATTTGGTTCAAGTTTCACG 59.269 43.478 0.00 0.00 0.00 4.35
60 61 4.733523 GCTCATTTGGTTCAAGTTTCACGT 60.734 41.667 0.00 0.00 0.00 4.49
61 62 4.667262 TCATTTGGTTCAAGTTTCACGTG 58.333 39.130 9.94 9.94 0.00 4.49
62 63 4.156922 TCATTTGGTTCAAGTTTCACGTGT 59.843 37.500 16.51 0.00 0.00 4.49
63 64 3.479505 TTGGTTCAAGTTTCACGTGTG 57.520 42.857 16.51 6.08 0.00 3.82
64 65 1.131504 TGGTTCAAGTTTCACGTGTGC 59.868 47.619 16.51 7.03 0.00 4.57
65 66 1.452717 GTTCAAGTTTCACGTGTGCG 58.547 50.000 16.51 0.00 44.93 5.34
76 77 2.751436 GTGTGCGTGGCCATGGAT 60.751 61.111 26.22 0.00 0.00 3.41
77 78 2.751036 TGTGCGTGGCCATGGATG 60.751 61.111 26.22 1.46 0.00 3.51
78 79 2.751436 GTGCGTGGCCATGGATGT 60.751 61.111 26.22 0.00 0.00 3.06
79 80 2.751036 TGCGTGGCCATGGATGTG 60.751 61.111 26.22 2.74 0.00 3.21
80 81 4.197498 GCGTGGCCATGGATGTGC 62.197 66.667 26.22 9.90 0.00 4.57
81 82 2.751036 CGTGGCCATGGATGTGCA 60.751 61.111 18.40 0.00 0.00 4.57
82 83 2.767445 CGTGGCCATGGATGTGCAG 61.767 63.158 18.40 0.00 0.00 4.41
83 84 1.679977 GTGGCCATGGATGTGCAGT 60.680 57.895 18.40 0.00 0.00 4.40
84 85 0.394216 GTGGCCATGGATGTGCAGTA 60.394 55.000 18.40 0.00 0.00 2.74
85 86 0.394216 TGGCCATGGATGTGCAGTAC 60.394 55.000 18.40 0.00 0.00 2.73
86 87 1.439353 GGCCATGGATGTGCAGTACG 61.439 60.000 18.40 0.00 0.00 3.67
87 88 1.439353 GCCATGGATGTGCAGTACGG 61.439 60.000 18.40 0.00 0.00 4.02
88 89 1.439353 CCATGGATGTGCAGTACGGC 61.439 60.000 5.56 11.37 0.00 5.68
89 90 0.744057 CATGGATGTGCAGTACGGCA 60.744 55.000 17.06 17.06 42.53 5.69
90 91 0.462581 ATGGATGTGCAGTACGGCAG 60.463 55.000 21.34 0.00 45.96 4.85
91 92 1.079127 GGATGTGCAGTACGGCAGT 60.079 57.895 21.34 12.80 45.96 4.40
92 93 1.361668 GGATGTGCAGTACGGCAGTG 61.362 60.000 21.34 0.00 45.96 3.66
97 98 4.284123 CAGTACGGCAGTGCACAT 57.716 55.556 21.04 3.73 35.31 3.21
98 99 2.081526 CAGTACGGCAGTGCACATC 58.918 57.895 21.04 9.74 35.31 3.06
99 100 1.446099 AGTACGGCAGTGCACATCG 60.446 57.895 21.04 20.19 35.31 3.84
100 101 1.736645 GTACGGCAGTGCACATCGT 60.737 57.895 26.23 26.23 37.78 3.73
101 102 1.736282 TACGGCAGTGCACATCGTG 60.736 57.895 29.00 17.51 35.60 4.35
110 111 3.857854 CACATCGTGCAGCTCGCC 61.858 66.667 12.05 0.00 41.33 5.54
112 113 4.827087 CATCGTGCAGCTCGCCCT 62.827 66.667 12.05 0.00 41.33 5.19
113 114 4.521062 ATCGTGCAGCTCGCCCTC 62.521 66.667 12.05 0.00 41.33 4.30
126 127 4.007644 CCCTCTGCGCAGTCCACA 62.008 66.667 34.70 16.10 0.00 4.17
127 128 2.740055 CCTCTGCGCAGTCCACAC 60.740 66.667 34.70 0.00 0.00 3.82
128 129 2.029518 CTCTGCGCAGTCCACACA 59.970 61.111 34.70 14.59 0.00 3.72
129 130 1.595109 CTCTGCGCAGTCCACACAA 60.595 57.895 34.70 13.83 0.00 3.33
130 131 1.153269 TCTGCGCAGTCCACACAAA 60.153 52.632 34.70 11.47 0.00 2.83
131 132 0.746204 TCTGCGCAGTCCACACAAAA 60.746 50.000 34.70 10.68 0.00 2.44
132 133 0.100325 CTGCGCAGTCCACACAAAAA 59.900 50.000 29.24 0.00 0.00 1.94
159 160 2.903284 GCACCAATTTGTGTGGCTG 58.097 52.632 11.00 0.00 40.02 4.85
160 161 0.600782 GCACCAATTTGTGTGGCTGG 60.601 55.000 11.00 0.00 40.02 4.85
161 162 0.600782 CACCAATTTGTGTGGCTGGC 60.601 55.000 1.51 0.00 40.02 4.85
162 163 0.760189 ACCAATTTGTGTGGCTGGCT 60.760 50.000 2.00 0.00 40.02 4.75
163 164 1.255882 CCAATTTGTGTGGCTGGCTA 58.744 50.000 2.00 0.00 0.00 3.93
164 165 1.617850 CCAATTTGTGTGGCTGGCTAA 59.382 47.619 2.00 0.00 0.00 3.09
165 166 2.610232 CCAATTTGTGTGGCTGGCTAAC 60.610 50.000 2.00 1.41 0.00 2.34
166 167 0.881118 ATTTGTGTGGCTGGCTAACG 59.119 50.000 2.00 0.00 0.00 3.18
167 168 1.791103 TTTGTGTGGCTGGCTAACGC 61.791 55.000 2.00 0.43 0.00 4.84
168 169 2.668212 GTGTGGCTGGCTAACGCA 60.668 61.111 2.00 0.00 38.10 5.24
169 170 2.040544 GTGTGGCTGGCTAACGCAT 61.041 57.895 2.00 0.00 38.10 4.73
170 171 1.745115 TGTGGCTGGCTAACGCATC 60.745 57.895 2.00 0.00 38.10 3.91
171 172 2.511373 TGGCTGGCTAACGCATCG 60.511 61.111 2.00 0.00 38.10 3.84
172 173 3.941836 GGCTGGCTAACGCATCGC 61.942 66.667 0.00 0.00 38.10 4.58
173 174 2.892425 GCTGGCTAACGCATCGCT 60.892 61.111 0.00 0.00 38.10 4.93
174 175 1.591594 GCTGGCTAACGCATCGCTA 60.592 57.895 0.00 0.00 38.10 4.26
175 176 0.946221 GCTGGCTAACGCATCGCTAT 60.946 55.000 0.00 0.00 38.10 2.97
176 177 0.786581 CTGGCTAACGCATCGCTATG 59.213 55.000 0.00 0.00 38.10 2.23
177 178 0.387565 TGGCTAACGCATCGCTATGA 59.612 50.000 1.73 0.00 38.10 2.15
178 179 1.063806 GGCTAACGCATCGCTATGAG 58.936 55.000 1.73 0.97 38.71 2.90
179 180 0.436531 GCTAACGCATCGCTATGAGC 59.563 55.000 1.73 0.00 36.46 4.26
188 189 4.014065 GCTATGAGCGACCGGTTC 57.986 61.111 9.42 2.43 0.00 3.62
189 190 1.141019 GCTATGAGCGACCGGTTCA 59.859 57.895 9.42 9.65 40.34 3.18
190 191 1.146358 GCTATGAGCGACCGGTTCAC 61.146 60.000 9.42 0.55 38.78 3.18
191 192 0.456221 CTATGAGCGACCGGTTCACT 59.544 55.000 9.42 6.61 38.78 3.41
192 193 0.892755 TATGAGCGACCGGTTCACTT 59.107 50.000 9.42 3.87 38.78 3.16
193 194 0.389948 ATGAGCGACCGGTTCACTTC 60.390 55.000 9.42 3.52 38.78 3.01
194 195 1.289380 GAGCGACCGGTTCACTTCT 59.711 57.895 9.42 0.00 0.00 2.85
195 196 0.319641 GAGCGACCGGTTCACTTCTT 60.320 55.000 9.42 0.00 0.00 2.52
196 197 0.106149 AGCGACCGGTTCACTTCTTT 59.894 50.000 9.42 0.00 0.00 2.52
197 198 0.942252 GCGACCGGTTCACTTCTTTT 59.058 50.000 9.42 0.00 0.00 2.27
198 199 1.332686 GCGACCGGTTCACTTCTTTTT 59.667 47.619 9.42 0.00 0.00 1.94
199 200 2.545106 GCGACCGGTTCACTTCTTTTTA 59.455 45.455 9.42 0.00 0.00 1.52
200 201 3.002553 GCGACCGGTTCACTTCTTTTTAA 59.997 43.478 9.42 0.00 0.00 1.52
201 202 4.319984 GCGACCGGTTCACTTCTTTTTAAT 60.320 41.667 9.42 0.00 0.00 1.40
202 203 5.144359 CGACCGGTTCACTTCTTTTTAATG 58.856 41.667 9.42 0.00 0.00 1.90
203 204 5.447624 ACCGGTTCACTTCTTTTTAATGG 57.552 39.130 0.00 0.00 0.00 3.16
204 205 4.279922 ACCGGTTCACTTCTTTTTAATGGG 59.720 41.667 0.00 0.00 0.00 4.00
205 206 4.521256 CCGGTTCACTTCTTTTTAATGGGA 59.479 41.667 0.00 0.00 0.00 4.37
206 207 5.185056 CCGGTTCACTTCTTTTTAATGGGAT 59.815 40.000 0.00 0.00 0.00 3.85
207 208 6.092748 CGGTTCACTTCTTTTTAATGGGATG 58.907 40.000 0.00 0.00 0.00 3.51
208 209 6.398095 GGTTCACTTCTTTTTAATGGGATGG 58.602 40.000 0.00 0.00 0.00 3.51
209 210 6.398095 GTTCACTTCTTTTTAATGGGATGGG 58.602 40.000 0.00 0.00 0.00 4.00
210 211 5.898120 TCACTTCTTTTTAATGGGATGGGA 58.102 37.500 0.00 0.00 0.00 4.37
211 212 5.951747 TCACTTCTTTTTAATGGGATGGGAG 59.048 40.000 0.00 0.00 0.00 4.30
212 213 5.127682 CACTTCTTTTTAATGGGATGGGAGG 59.872 44.000 0.00 0.00 0.00 4.30
213 214 3.642141 TCTTTTTAATGGGATGGGAGGC 58.358 45.455 0.00 0.00 0.00 4.70
214 215 2.065899 TTTTAATGGGATGGGAGGCG 57.934 50.000 0.00 0.00 0.00 5.52
215 216 0.467290 TTTAATGGGATGGGAGGCGC 60.467 55.000 0.00 0.00 0.00 6.53
216 217 1.640593 TTAATGGGATGGGAGGCGCA 61.641 55.000 10.83 0.00 0.00 6.09
217 218 1.426251 TAATGGGATGGGAGGCGCAT 61.426 55.000 10.83 0.00 39.69 4.73
218 219 2.302517 AATGGGATGGGAGGCGCATT 62.303 55.000 10.83 0.00 41.13 3.56
219 220 2.123726 GGGATGGGAGGCGCATTT 60.124 61.111 10.83 0.00 37.16 2.32
220 221 2.196245 GGGATGGGAGGCGCATTTC 61.196 63.158 10.83 3.16 37.16 2.17
221 222 1.453745 GGATGGGAGGCGCATTTCA 60.454 57.895 10.83 5.10 37.16 2.69
222 223 1.728490 GGATGGGAGGCGCATTTCAC 61.728 60.000 10.83 5.31 37.16 3.18
223 224 0.749454 GATGGGAGGCGCATTTCACT 60.749 55.000 10.83 0.00 37.16 3.41
224 225 0.323725 ATGGGAGGCGCATTTCACTT 60.324 50.000 10.83 0.00 33.22 3.16
225 226 0.326595 TGGGAGGCGCATTTCACTTA 59.673 50.000 10.83 0.00 0.00 2.24
226 227 1.064758 TGGGAGGCGCATTTCACTTAT 60.065 47.619 10.83 0.00 0.00 1.73
227 228 2.171659 TGGGAGGCGCATTTCACTTATA 59.828 45.455 10.83 0.00 0.00 0.98
228 229 3.181445 TGGGAGGCGCATTTCACTTATAT 60.181 43.478 10.83 0.00 0.00 0.86
229 230 4.041075 TGGGAGGCGCATTTCACTTATATA 59.959 41.667 10.83 0.00 0.00 0.86
230 231 5.186198 GGGAGGCGCATTTCACTTATATAT 58.814 41.667 10.83 0.00 0.00 0.86
231 232 5.648092 GGGAGGCGCATTTCACTTATATATT 59.352 40.000 10.83 0.00 0.00 1.28
232 233 6.151144 GGGAGGCGCATTTCACTTATATATTT 59.849 38.462 10.83 0.00 0.00 1.40
233 234 7.309194 GGGAGGCGCATTTCACTTATATATTTT 60.309 37.037 10.83 0.00 0.00 1.82
234 235 7.538678 GGAGGCGCATTTCACTTATATATTTTG 59.461 37.037 10.83 0.00 0.00 2.44
235 236 7.940850 AGGCGCATTTCACTTATATATTTTGT 58.059 30.769 10.83 0.00 0.00 2.83
236 237 7.862372 AGGCGCATTTCACTTATATATTTTGTG 59.138 33.333 10.83 0.00 0.00 3.33
237 238 7.358352 GGCGCATTTCACTTATATATTTTGTGC 60.358 37.037 10.83 0.00 36.45 4.57
238 239 7.167302 GCGCATTTCACTTATATATTTTGTGCA 59.833 33.333 0.30 0.00 36.98 4.57
239 240 8.684655 CGCATTTCACTTATATATTTTGTGCAG 58.315 33.333 0.00 0.00 0.00 4.41
240 241 8.482429 GCATTTCACTTATATATTTTGTGCAGC 58.518 33.333 0.00 0.00 0.00 5.25
241 242 9.740239 CATTTCACTTATATATTTTGTGCAGCT 57.260 29.630 0.00 0.00 0.00 4.24
242 243 9.956720 ATTTCACTTATATATTTTGTGCAGCTC 57.043 29.630 0.00 0.00 0.00 4.09
243 244 7.177498 TCACTTATATATTTTGTGCAGCTCG 57.823 36.000 0.00 0.00 0.00 5.03
244 245 6.202762 TCACTTATATATTTTGTGCAGCTCGG 59.797 38.462 0.00 0.00 0.00 4.63
245 246 3.904136 ATATATTTTGTGCAGCTCGGC 57.096 42.857 0.00 0.00 0.00 5.54
246 247 0.740737 ATATTTTGTGCAGCTCGGCC 59.259 50.000 0.00 0.00 0.00 6.13
247 248 1.312371 TATTTTGTGCAGCTCGGCCC 61.312 55.000 0.00 0.00 0.00 5.80
248 249 3.940174 TATTTTGTGCAGCTCGGCCCA 62.940 52.381 0.00 0.00 0.00 5.36
257 258 2.270205 CTCGGCCCAGAGCAACAT 59.730 61.111 0.00 0.00 46.50 2.71
258 259 2.046023 TCGGCCCAGAGCAACATG 60.046 61.111 0.00 0.00 46.50 3.21
259 260 3.818787 CGGCCCAGAGCAACATGC 61.819 66.667 0.00 0.00 46.50 4.06
269 270 1.566563 GCAACATGCGGCTCTATCG 59.433 57.895 0.00 0.00 31.71 2.92
270 271 1.835483 GCAACATGCGGCTCTATCGG 61.835 60.000 0.00 0.00 31.71 4.18
271 272 1.595382 AACATGCGGCTCTATCGGC 60.595 57.895 0.00 0.00 0.00 5.54
279 280 4.286320 CTCTATCGGCGGCGGCTT 62.286 66.667 31.73 19.90 39.81 4.35
280 281 4.585526 TCTATCGGCGGCGGCTTG 62.586 66.667 31.73 18.74 39.81 4.01
290 291 4.090057 GCGGCTTGCAGTTCCGAC 62.090 66.667 22.06 12.29 45.53 4.79
291 292 3.423154 CGGCTTGCAGTTCCGACC 61.423 66.667 15.44 0.00 45.53 4.79
292 293 2.281484 GGCTTGCAGTTCCGACCA 60.281 61.111 0.00 0.00 0.00 4.02
293 294 2.617274 GGCTTGCAGTTCCGACCAC 61.617 63.158 0.00 0.00 0.00 4.16
294 295 2.954753 GCTTGCAGTTCCGACCACG 61.955 63.158 0.00 0.00 39.43 4.94
295 296 1.300620 CTTGCAGTTCCGACCACGA 60.301 57.895 0.00 0.00 42.66 4.35
296 297 1.284982 CTTGCAGTTCCGACCACGAG 61.285 60.000 0.00 0.00 42.66 4.18
297 298 3.112709 GCAGTTCCGACCACGAGC 61.113 66.667 0.00 0.00 42.66 5.03
298 299 2.432628 CAGTTCCGACCACGAGCC 60.433 66.667 0.00 0.00 42.66 4.70
299 300 3.692406 AGTTCCGACCACGAGCCC 61.692 66.667 0.00 0.00 42.66 5.19
300 301 3.998672 GTTCCGACCACGAGCCCA 61.999 66.667 0.00 0.00 42.66 5.36
301 302 3.000819 TTCCGACCACGAGCCCAT 61.001 61.111 0.00 0.00 42.66 4.00
302 303 3.309436 TTCCGACCACGAGCCCATG 62.309 63.158 0.00 0.00 42.66 3.66
304 305 4.758251 CGACCACGAGCCCATGCA 62.758 66.667 0.00 0.00 42.66 3.96
305 306 2.821366 GACCACGAGCCCATGCAG 60.821 66.667 0.00 0.00 41.13 4.41
306 307 3.612247 GACCACGAGCCCATGCAGT 62.612 63.158 0.00 0.00 41.13 4.40
307 308 2.238847 GACCACGAGCCCATGCAGTA 62.239 60.000 0.00 0.00 41.13 2.74
308 309 1.815421 CCACGAGCCCATGCAGTAC 60.815 63.158 0.00 0.00 41.13 2.73
309 310 2.167219 CACGAGCCCATGCAGTACG 61.167 63.158 0.00 0.00 41.13 3.67
310 311 3.264897 CGAGCCCATGCAGTACGC 61.265 66.667 0.00 3.22 41.13 4.42
311 312 2.187946 GAGCCCATGCAGTACGCT 59.812 61.111 10.27 0.00 43.06 5.07
312 313 2.124983 AGCCCATGCAGTACGCTG 60.125 61.111 10.27 6.68 45.23 5.18
313 314 2.125147 GCCCATGCAGTACGCTGA 60.125 61.111 10.27 0.00 45.28 4.26
314 315 2.464459 GCCCATGCAGTACGCTGAC 61.464 63.158 10.27 0.00 45.28 3.51
315 316 2.167219 CCCATGCAGTACGCTGACG 61.167 63.158 10.27 0.00 45.28 4.35
316 317 2.697425 CATGCAGTACGCTGACGC 59.303 61.111 10.27 0.00 45.28 5.19
317 318 2.509336 ATGCAGTACGCTGACGCC 60.509 61.111 10.27 0.00 45.28 5.68
318 319 4.735132 TGCAGTACGCTGACGCCC 62.735 66.667 10.27 0.00 45.28 6.13
319 320 4.436998 GCAGTACGCTGACGCCCT 62.437 66.667 0.00 0.00 45.28 5.19
320 321 2.202623 CAGTACGCTGACGCCCTC 60.203 66.667 0.00 0.00 45.28 4.30
321 322 3.450115 AGTACGCTGACGCCCTCC 61.450 66.667 0.00 0.00 45.53 4.30
322 323 3.755628 GTACGCTGACGCCCTCCA 61.756 66.667 0.00 0.00 45.53 3.86
323 324 2.758327 TACGCTGACGCCCTCCAT 60.758 61.111 0.00 0.00 45.53 3.41
324 325 3.076258 TACGCTGACGCCCTCCATG 62.076 63.158 0.00 0.00 45.53 3.66
325 326 4.457496 CGCTGACGCCCTCCATGT 62.457 66.667 0.00 0.00 0.00 3.21
326 327 2.045926 GCTGACGCCCTCCATGTT 60.046 61.111 0.00 0.00 0.00 2.71
327 328 2.109126 GCTGACGCCCTCCATGTTC 61.109 63.158 0.00 0.00 0.00 3.18
328 329 1.450312 CTGACGCCCTCCATGTTCC 60.450 63.158 0.00 0.00 0.00 3.62
329 330 2.124695 GACGCCCTCCATGTTCCC 60.125 66.667 0.00 0.00 0.00 3.97
330 331 3.699134 GACGCCCTCCATGTTCCCC 62.699 68.421 0.00 0.00 0.00 4.81
331 332 3.727258 CGCCCTCCATGTTCCCCA 61.727 66.667 0.00 0.00 0.00 4.96
332 333 3.018901 GCCCTCCATGTTCCCCAT 58.981 61.111 0.00 0.00 0.00 4.00
333 334 1.152673 GCCCTCCATGTTCCCCATC 60.153 63.158 0.00 0.00 0.00 3.51
334 335 1.649271 GCCCTCCATGTTCCCCATCT 61.649 60.000 0.00 0.00 0.00 2.90
335 336 0.475906 CCCTCCATGTTCCCCATCTC 59.524 60.000 0.00 0.00 0.00 2.75
336 337 0.475906 CCTCCATGTTCCCCATCTCC 59.524 60.000 0.00 0.00 0.00 3.71
337 338 1.216064 CTCCATGTTCCCCATCTCCA 58.784 55.000 0.00 0.00 0.00 3.86
338 339 0.918983 TCCATGTTCCCCATCTCCAC 59.081 55.000 0.00 0.00 0.00 4.02
339 340 0.921896 CCATGTTCCCCATCTCCACT 59.078 55.000 0.00 0.00 0.00 4.00
340 341 1.285962 CCATGTTCCCCATCTCCACTT 59.714 52.381 0.00 0.00 0.00 3.16
341 342 2.372264 CATGTTCCCCATCTCCACTTG 58.628 52.381 0.00 0.00 0.00 3.16
342 343 0.038166 TGTTCCCCATCTCCACTTGC 59.962 55.000 0.00 0.00 0.00 4.01
343 344 0.038166 GTTCCCCATCTCCACTTGCA 59.962 55.000 0.00 0.00 0.00 4.08
344 345 0.329261 TTCCCCATCTCCACTTGCAG 59.671 55.000 0.00 0.00 0.00 4.41
345 346 0.842030 TCCCCATCTCCACTTGCAGT 60.842 55.000 0.00 0.00 0.00 4.40
346 347 0.393537 CCCCATCTCCACTTGCAGTC 60.394 60.000 0.00 0.00 0.00 3.51
347 348 0.393537 CCCATCTCCACTTGCAGTCC 60.394 60.000 0.00 0.00 0.00 3.85
348 349 0.325933 CCATCTCCACTTGCAGTCCA 59.674 55.000 0.00 0.00 0.00 4.02
349 350 1.678123 CCATCTCCACTTGCAGTCCAG 60.678 57.143 0.00 0.00 0.00 3.86
350 351 1.002888 CATCTCCACTTGCAGTCCAGT 59.997 52.381 0.00 0.00 0.00 4.00
351 352 0.681733 TCTCCACTTGCAGTCCAGTC 59.318 55.000 0.00 0.00 0.00 3.51
352 353 0.394192 CTCCACTTGCAGTCCAGTCA 59.606 55.000 0.00 0.00 0.00 3.41
353 354 0.106708 TCCACTTGCAGTCCAGTCAC 59.893 55.000 0.00 0.00 0.00 3.67
354 355 0.107456 CCACTTGCAGTCCAGTCACT 59.893 55.000 0.00 0.00 0.00 3.41
355 356 1.224075 CACTTGCAGTCCAGTCACTG 58.776 55.000 0.00 0.00 45.82 3.66
364 365 4.994744 CAGTCACTGGATGCGTGA 57.005 55.556 0.00 7.56 38.94 4.35
365 366 3.215642 CAGTCACTGGATGCGTGAA 57.784 52.632 11.94 0.00 42.45 3.18
366 367 1.073964 CAGTCACTGGATGCGTGAAG 58.926 55.000 11.94 6.17 42.45 3.02
367 368 0.969149 AGTCACTGGATGCGTGAAGA 59.031 50.000 11.94 0.00 42.45 2.87
368 369 1.344438 AGTCACTGGATGCGTGAAGAA 59.656 47.619 11.94 0.00 42.45 2.52
369 370 1.461127 GTCACTGGATGCGTGAAGAAC 59.539 52.381 11.94 0.24 42.45 3.01
383 384 2.548057 TGAAGAACGTTTCACTGGATGC 59.452 45.455 0.46 0.00 32.39 3.91
384 385 1.148310 AGAACGTTTCACTGGATGCG 58.852 50.000 0.46 0.00 0.00 4.73
385 386 0.865769 GAACGTTTCACTGGATGCGT 59.134 50.000 0.46 0.00 36.02 5.24
386 387 0.865769 AACGTTTCACTGGATGCGTC 59.134 50.000 0.00 0.00 34.31 5.19
387 388 0.033504 ACGTTTCACTGGATGCGTCT 59.966 50.000 5.77 0.00 31.28 4.18
388 389 1.271379 ACGTTTCACTGGATGCGTCTA 59.729 47.619 5.77 0.00 31.28 2.59
389 390 2.288579 ACGTTTCACTGGATGCGTCTAA 60.289 45.455 5.77 0.00 31.28 2.10
390 391 2.734606 CGTTTCACTGGATGCGTCTAAA 59.265 45.455 5.77 0.00 0.00 1.85
391 392 3.185594 CGTTTCACTGGATGCGTCTAAAA 59.814 43.478 5.77 0.00 0.00 1.52
392 393 4.142902 CGTTTCACTGGATGCGTCTAAAAT 60.143 41.667 5.77 0.00 0.00 1.82
393 394 4.944962 TTCACTGGATGCGTCTAAAATG 57.055 40.909 5.77 0.00 0.00 2.32
394 395 3.937814 TCACTGGATGCGTCTAAAATGT 58.062 40.909 5.77 0.00 0.00 2.71
395 396 3.932710 TCACTGGATGCGTCTAAAATGTC 59.067 43.478 5.77 0.00 0.00 3.06
396 397 3.684305 CACTGGATGCGTCTAAAATGTCA 59.316 43.478 5.77 0.00 0.00 3.58
397 398 4.333649 CACTGGATGCGTCTAAAATGTCAT 59.666 41.667 5.77 0.00 0.00 3.06
398 399 5.523552 CACTGGATGCGTCTAAAATGTCATA 59.476 40.000 5.77 0.00 0.00 2.15
399 400 5.755375 ACTGGATGCGTCTAAAATGTCATAG 59.245 40.000 5.77 0.00 0.00 2.23
400 401 5.670485 TGGATGCGTCTAAAATGTCATAGT 58.330 37.500 5.77 0.00 0.00 2.12
401 402 5.523552 TGGATGCGTCTAAAATGTCATAGTG 59.476 40.000 5.77 0.00 0.00 2.74
402 403 5.523916 GGATGCGTCTAAAATGTCATAGTGT 59.476 40.000 5.77 0.00 0.00 3.55
403 404 6.037172 GGATGCGTCTAAAATGTCATAGTGTT 59.963 38.462 5.77 0.00 0.00 3.32
404 405 6.164408 TGCGTCTAAAATGTCATAGTGTTG 57.836 37.500 0.00 0.00 0.00 3.33
405 406 5.929415 TGCGTCTAAAATGTCATAGTGTTGA 59.071 36.000 0.00 0.00 0.00 3.18
406 407 6.593770 TGCGTCTAAAATGTCATAGTGTTGAT 59.406 34.615 0.00 0.00 0.00 2.57
407 408 6.901887 GCGTCTAAAATGTCATAGTGTTGATG 59.098 38.462 0.00 0.00 0.00 3.07
408 409 6.901887 CGTCTAAAATGTCATAGTGTTGATGC 59.098 38.462 0.00 0.00 0.00 3.91
409 410 7.412891 CGTCTAAAATGTCATAGTGTTGATGCA 60.413 37.037 0.00 0.00 0.00 3.96
410 411 8.236586 GTCTAAAATGTCATAGTGTTGATGCAA 58.763 33.333 0.00 0.00 0.00 4.08
411 412 8.791675 TCTAAAATGTCATAGTGTTGATGCAAA 58.208 29.630 0.00 0.00 0.00 3.68
412 413 9.577110 CTAAAATGTCATAGTGTTGATGCAAAT 57.423 29.630 0.00 0.00 0.00 2.32
413 414 7.821595 AAATGTCATAGTGTTGATGCAAATG 57.178 32.000 0.00 0.00 0.00 2.32
414 415 6.762702 ATGTCATAGTGTTGATGCAAATGA 57.237 33.333 0.00 0.00 0.00 2.57
415 416 5.941733 TGTCATAGTGTTGATGCAAATGAC 58.058 37.500 12.38 12.38 40.58 3.06
416 417 5.472820 TGTCATAGTGTTGATGCAAATGACA 59.527 36.000 15.74 15.74 43.69 3.58
417 418 6.025896 GTCATAGTGTTGATGCAAATGACAG 58.974 40.000 13.58 0.00 40.28 3.51
418 419 5.939296 TCATAGTGTTGATGCAAATGACAGA 59.061 36.000 0.00 0.00 0.00 3.41
419 420 6.600427 TCATAGTGTTGATGCAAATGACAGAT 59.400 34.615 0.00 0.00 0.00 2.90
420 421 5.306532 AGTGTTGATGCAAATGACAGATC 57.693 39.130 0.00 0.00 0.00 2.75
421 422 5.008331 AGTGTTGATGCAAATGACAGATCT 58.992 37.500 0.00 0.00 0.00 2.75
422 423 5.475909 AGTGTTGATGCAAATGACAGATCTT 59.524 36.000 0.00 0.00 0.00 2.40
423 424 6.015688 AGTGTTGATGCAAATGACAGATCTTT 60.016 34.615 0.00 0.00 0.00 2.52
424 425 6.089016 GTGTTGATGCAAATGACAGATCTTTG 59.911 38.462 0.00 0.00 33.93 2.77
428 429 4.430137 GCAAATGACAGATCTTTGCTGA 57.570 40.909 17.84 0.00 46.94 4.26
429 430 4.995124 GCAAATGACAGATCTTTGCTGAT 58.005 39.130 17.84 0.00 46.94 2.90
430 431 5.408356 GCAAATGACAGATCTTTGCTGATT 58.592 37.500 17.84 0.00 46.94 2.57
431 432 5.867716 GCAAATGACAGATCTTTGCTGATTT 59.132 36.000 17.84 4.64 46.94 2.17
432 433 6.367969 GCAAATGACAGATCTTTGCTGATTTT 59.632 34.615 17.84 0.00 46.94 1.82
433 434 7.543172 GCAAATGACAGATCTTTGCTGATTTTA 59.457 33.333 17.84 0.00 46.94 1.52
434 435 8.857216 CAAATGACAGATCTTTGCTGATTTTAC 58.143 33.333 0.00 0.00 36.86 2.01
435 436 7.692460 ATGACAGATCTTTGCTGATTTTACA 57.308 32.000 0.00 0.00 36.86 2.41
436 437 7.509141 TGACAGATCTTTGCTGATTTTACAA 57.491 32.000 0.00 0.00 36.86 2.41
437 438 7.939782 TGACAGATCTTTGCTGATTTTACAAA 58.060 30.769 0.00 0.00 36.86 2.83
438 439 7.862372 TGACAGATCTTTGCTGATTTTACAAAC 59.138 33.333 0.00 0.00 36.86 2.93
439 440 7.147976 ACAGATCTTTGCTGATTTTACAAACC 58.852 34.615 0.00 0.00 36.86 3.27
440 441 7.014615 ACAGATCTTTGCTGATTTTACAAACCT 59.985 33.333 0.00 0.00 36.86 3.50
441 442 7.327761 CAGATCTTTGCTGATTTTACAAACCTG 59.672 37.037 0.00 0.00 35.39 4.00
442 443 6.463995 TCTTTGCTGATTTTACAAACCTGT 57.536 33.333 0.00 0.00 39.75 4.00
443 444 6.872920 TCTTTGCTGATTTTACAAACCTGTT 58.127 32.000 0.00 0.00 36.96 3.16
444 445 7.327214 TCTTTGCTGATTTTACAAACCTGTTT 58.673 30.769 0.00 0.00 36.96 2.83
460 461 4.599047 CTGTTTGGCAGGATTTGGTAAA 57.401 40.909 0.00 0.00 41.42 2.01
461 462 5.151297 CTGTTTGGCAGGATTTGGTAAAT 57.849 39.130 0.00 0.00 41.42 1.40
462 463 5.550290 CTGTTTGGCAGGATTTGGTAAATT 58.450 37.500 0.00 0.00 41.42 1.82
463 464 5.303971 TGTTTGGCAGGATTTGGTAAATTG 58.696 37.500 0.00 0.00 0.00 2.32
464 465 5.070981 TGTTTGGCAGGATTTGGTAAATTGA 59.929 36.000 0.00 0.00 0.00 2.57
465 466 6.172630 GTTTGGCAGGATTTGGTAAATTGAT 58.827 36.000 0.00 0.00 0.00 2.57
466 467 6.371595 TTGGCAGGATTTGGTAAATTGATT 57.628 33.333 0.00 0.00 0.00 2.57
467 468 7.487822 TTGGCAGGATTTGGTAAATTGATTA 57.512 32.000 0.00 0.00 0.00 1.75
468 469 7.111247 TGGCAGGATTTGGTAAATTGATTAG 57.889 36.000 0.00 0.00 0.00 1.73
469 470 6.894654 TGGCAGGATTTGGTAAATTGATTAGA 59.105 34.615 0.00 0.00 0.00 2.10
470 471 7.147915 TGGCAGGATTTGGTAAATTGATTAGAC 60.148 37.037 0.00 0.00 0.00 2.59
471 472 7.203218 GCAGGATTTGGTAAATTGATTAGACC 58.797 38.462 0.00 0.00 0.00 3.85
472 473 7.147915 GCAGGATTTGGTAAATTGATTAGACCA 60.148 37.037 6.40 6.40 35.38 4.02
473 474 8.748412 CAGGATTTGGTAAATTGATTAGACCAA 58.252 33.333 14.48 14.48 40.89 3.67
474 475 8.971073 AGGATTTGGTAAATTGATTAGACCAAG 58.029 33.333 16.41 0.00 42.22 3.61
475 476 8.197439 GGATTTGGTAAATTGATTAGACCAAGG 58.803 37.037 16.41 0.00 42.22 3.61
476 477 7.475137 TTTGGTAAATTGATTAGACCAAGGG 57.525 36.000 16.41 0.00 42.22 3.95
477 478 6.395780 TGGTAAATTGATTAGACCAAGGGA 57.604 37.500 7.57 0.00 34.69 4.20
478 479 6.795590 TGGTAAATTGATTAGACCAAGGGAA 58.204 36.000 7.57 0.00 34.69 3.97
479 480 7.418378 TGGTAAATTGATTAGACCAAGGGAAT 58.582 34.615 7.57 0.00 34.69 3.01
480 481 7.898636 TGGTAAATTGATTAGACCAAGGGAATT 59.101 33.333 7.57 0.00 34.69 2.17
481 482 8.758829 GGTAAATTGATTAGACCAAGGGAATTT 58.241 33.333 0.00 0.00 0.00 1.82
482 483 9.586435 GTAAATTGATTAGACCAAGGGAATTTG 57.414 33.333 0.00 0.00 0.00 2.32
483 484 7.797121 AATTGATTAGACCAAGGGAATTTGT 57.203 32.000 0.00 0.00 0.00 2.83
484 485 7.797121 ATTGATTAGACCAAGGGAATTTGTT 57.203 32.000 0.00 0.00 0.00 2.83
485 486 7.610580 TTGATTAGACCAAGGGAATTTGTTT 57.389 32.000 0.00 0.00 0.00 2.83
486 487 6.991938 TGATTAGACCAAGGGAATTTGTTTG 58.008 36.000 0.00 0.00 0.00 2.93
487 488 6.780031 TGATTAGACCAAGGGAATTTGTTTGA 59.220 34.615 0.00 0.00 0.00 2.69
488 489 7.288852 TGATTAGACCAAGGGAATTTGTTTGAA 59.711 33.333 0.00 0.00 0.00 2.69
489 490 5.535753 AGACCAAGGGAATTTGTTTGAAG 57.464 39.130 0.00 0.00 0.00 3.02
490 491 4.344968 AGACCAAGGGAATTTGTTTGAAGG 59.655 41.667 0.00 0.00 0.00 3.46
491 492 4.037222 ACCAAGGGAATTTGTTTGAAGGT 58.963 39.130 0.00 0.00 0.00 3.50
492 493 4.473196 ACCAAGGGAATTTGTTTGAAGGTT 59.527 37.500 0.00 0.00 0.00 3.50
493 494 5.045213 ACCAAGGGAATTTGTTTGAAGGTTT 60.045 36.000 0.00 0.00 0.00 3.27
494 495 5.527214 CCAAGGGAATTTGTTTGAAGGTTTC 59.473 40.000 0.00 0.00 0.00 2.78
495 496 5.948742 AGGGAATTTGTTTGAAGGTTTCA 57.051 34.783 0.00 0.00 38.04 2.69
496 497 6.499106 AGGGAATTTGTTTGAAGGTTTCAT 57.501 33.333 0.00 0.00 39.84 2.57
497 498 6.899089 AGGGAATTTGTTTGAAGGTTTCATT 58.101 32.000 0.00 0.00 39.84 2.57
498 499 6.767423 AGGGAATTTGTTTGAAGGTTTCATTG 59.233 34.615 0.00 0.00 39.84 2.82
499 500 6.542005 GGGAATTTGTTTGAAGGTTTCATTGT 59.458 34.615 0.00 0.00 39.84 2.71
500 501 7.408910 GGAATTTGTTTGAAGGTTTCATTGTG 58.591 34.615 0.00 0.00 39.84 3.33
501 502 7.065683 GGAATTTGTTTGAAGGTTTCATTGTGT 59.934 33.333 0.00 0.00 39.84 3.72
502 503 6.718454 TTTGTTTGAAGGTTTCATTGTGTG 57.282 33.333 0.00 0.00 39.84 3.82
503 504 5.651387 TGTTTGAAGGTTTCATTGTGTGA 57.349 34.783 0.00 0.00 39.84 3.58
504 505 5.649557 TGTTTGAAGGTTTCATTGTGTGAG 58.350 37.500 0.00 0.00 39.84 3.51
505 506 5.184864 TGTTTGAAGGTTTCATTGTGTGAGT 59.815 36.000 0.00 0.00 39.84 3.41
506 507 5.913137 TTGAAGGTTTCATTGTGTGAGTT 57.087 34.783 0.00 0.00 39.84 3.01
507 508 7.094162 TGTTTGAAGGTTTCATTGTGTGAGTTA 60.094 33.333 0.00 0.00 39.84 2.24
508 509 6.371809 TGAAGGTTTCATTGTGTGAGTTAC 57.628 37.500 0.00 0.00 38.29 2.50
509 510 6.119536 TGAAGGTTTCATTGTGTGAGTTACT 58.880 36.000 0.00 0.00 38.29 2.24
510 511 7.276658 TGAAGGTTTCATTGTGTGAGTTACTA 58.723 34.615 0.00 0.00 38.29 1.82
511 512 7.771361 TGAAGGTTTCATTGTGTGAGTTACTAA 59.229 33.333 0.00 0.00 38.29 2.24
512 513 7.730364 AGGTTTCATTGTGTGAGTTACTAAG 57.270 36.000 0.00 0.00 38.29 2.18
513 514 6.204882 AGGTTTCATTGTGTGAGTTACTAAGC 59.795 38.462 0.00 0.00 38.29 3.09
514 515 6.204882 GGTTTCATTGTGTGAGTTACTAAGCT 59.795 38.462 0.00 0.00 38.29 3.74
515 516 7.386848 GGTTTCATTGTGTGAGTTACTAAGCTA 59.613 37.037 0.00 0.00 38.29 3.32
516 517 8.936864 GTTTCATTGTGTGAGTTACTAAGCTAT 58.063 33.333 0.00 0.00 38.29 2.97
565 566 8.782339 TTTAATAGTAACTTTAGCTGACCACC 57.218 34.615 0.00 0.00 0.00 4.61
566 567 3.314541 AGTAACTTTAGCTGACCACCG 57.685 47.619 0.00 0.00 0.00 4.94
567 568 1.730612 GTAACTTTAGCTGACCACCGC 59.269 52.381 0.00 0.00 0.00 5.68
568 569 0.107831 AACTTTAGCTGACCACCGCA 59.892 50.000 0.00 0.00 0.00 5.69
569 570 0.324943 ACTTTAGCTGACCACCGCAT 59.675 50.000 0.00 0.00 0.00 4.73
570 571 1.553248 ACTTTAGCTGACCACCGCATA 59.447 47.619 0.00 0.00 0.00 3.14
571 572 1.933853 CTTTAGCTGACCACCGCATAC 59.066 52.381 0.00 0.00 0.00 2.39
572 573 0.899019 TTAGCTGACCACCGCATACA 59.101 50.000 0.00 0.00 0.00 2.29
573 574 0.459899 TAGCTGACCACCGCATACAG 59.540 55.000 0.00 0.00 0.00 2.74
574 575 1.218047 GCTGACCACCGCATACAGA 59.782 57.895 0.00 0.00 0.00 3.41
575 576 0.391130 GCTGACCACCGCATACAGAA 60.391 55.000 0.00 0.00 0.00 3.02
576 577 1.743772 GCTGACCACCGCATACAGAAT 60.744 52.381 0.00 0.00 0.00 2.40
577 578 1.935873 CTGACCACCGCATACAGAATG 59.064 52.381 0.00 0.00 46.00 2.67
578 579 1.552792 TGACCACCGCATACAGAATGA 59.447 47.619 0.00 0.00 39.69 2.57
579 580 2.027653 TGACCACCGCATACAGAATGAA 60.028 45.455 0.00 0.00 39.69 2.57
580 581 3.006940 GACCACCGCATACAGAATGAAA 58.993 45.455 0.00 0.00 39.69 2.69
581 582 3.417101 ACCACCGCATACAGAATGAAAA 58.583 40.909 0.00 0.00 39.69 2.29
582 583 4.016444 ACCACCGCATACAGAATGAAAAT 58.984 39.130 0.00 0.00 39.69 1.82
583 584 4.142403 ACCACCGCATACAGAATGAAAATG 60.142 41.667 0.00 0.00 39.69 2.32
584 585 4.353737 CACCGCATACAGAATGAAAATGG 58.646 43.478 0.00 0.00 39.69 3.16
585 586 4.096231 CACCGCATACAGAATGAAAATGGA 59.904 41.667 0.00 0.00 39.69 3.41
586 587 4.336433 ACCGCATACAGAATGAAAATGGAG 59.664 41.667 0.00 0.00 39.69 3.86
587 588 4.285292 CGCATACAGAATGAAAATGGAGC 58.715 43.478 0.00 0.00 39.69 4.70
588 589 4.036027 CGCATACAGAATGAAAATGGAGCT 59.964 41.667 0.00 0.00 39.69 4.09
589 590 5.237127 CGCATACAGAATGAAAATGGAGCTA 59.763 40.000 0.00 0.00 39.69 3.32
590 591 6.565435 CGCATACAGAATGAAAATGGAGCTAG 60.565 42.308 0.00 0.00 39.69 3.42
591 592 6.261826 GCATACAGAATGAAAATGGAGCTAGT 59.738 38.462 0.00 0.00 39.69 2.57
592 593 7.201767 GCATACAGAATGAAAATGGAGCTAGTT 60.202 37.037 0.00 0.00 39.69 2.24
593 594 9.330063 CATACAGAATGAAAATGGAGCTAGTTA 57.670 33.333 0.00 0.00 39.69 2.24
594 595 7.856145 ACAGAATGAAAATGGAGCTAGTTAG 57.144 36.000 0.00 0.00 39.69 2.34
595 596 7.398024 ACAGAATGAAAATGGAGCTAGTTAGT 58.602 34.615 0.00 0.00 39.69 2.24
596 597 8.540388 ACAGAATGAAAATGGAGCTAGTTAGTA 58.460 33.333 0.00 0.00 39.69 1.82
597 598 9.039870 CAGAATGAAAATGGAGCTAGTTAGTAG 57.960 37.037 0.00 0.00 39.69 2.57
623 624 7.180322 CTGTAAGGCATATGGAGATGATACT 57.820 40.000 4.56 0.00 0.00 2.12
624 625 8.298729 CTGTAAGGCATATGGAGATGATACTA 57.701 38.462 4.56 0.00 0.00 1.82
625 626 8.844865 TGTAAGGCATATGGAGATGATACTAT 57.155 34.615 4.56 0.00 0.00 2.12
626 627 9.271921 TGTAAGGCATATGGAGATGATACTATT 57.728 33.333 4.56 0.00 0.00 1.73
627 628 9.539825 GTAAGGCATATGGAGATGATACTATTG 57.460 37.037 4.56 0.00 0.00 1.90
628 629 7.134362 AGGCATATGGAGATGATACTATTGG 57.866 40.000 4.56 0.00 0.00 3.16
629 630 6.675746 AGGCATATGGAGATGATACTATTGGT 59.324 38.462 4.56 0.00 0.00 3.67
630 631 7.183475 AGGCATATGGAGATGATACTATTGGTT 59.817 37.037 4.56 0.00 0.00 3.67
631 632 7.831193 GGCATATGGAGATGATACTATTGGTTT 59.169 37.037 4.56 0.00 0.00 3.27
632 633 8.887717 GCATATGGAGATGATACTATTGGTTTC 58.112 37.037 4.56 0.00 0.00 2.78
664 665 9.529325 TTTCCGTATTATTCTATGAACACAGAG 57.471 33.333 0.00 0.00 0.00 3.35
665 666 7.145985 TCCGTATTATTCTATGAACACAGAGC 58.854 38.462 0.00 0.00 0.00 4.09
666 667 6.923508 CCGTATTATTCTATGAACACAGAGCA 59.076 38.462 0.00 0.00 0.00 4.26
667 668 7.438160 CCGTATTATTCTATGAACACAGAGCAA 59.562 37.037 0.00 0.00 0.00 3.91
668 669 8.982685 CGTATTATTCTATGAACACAGAGCAAT 58.017 33.333 0.00 0.00 0.00 3.56
673 674 8.969260 ATTCTATGAACACAGAGCAATTATGA 57.031 30.769 0.00 0.00 0.00 2.15
674 675 8.969260 TTCTATGAACACAGAGCAATTATGAT 57.031 30.769 0.00 0.00 0.00 2.45
679 680 8.510243 TGAACACAGAGCAATTATGATATGTT 57.490 30.769 0.00 0.00 44.30 2.71
680 681 8.400186 TGAACACAGAGCAATTATGATATGTTG 58.600 33.333 0.00 0.00 44.30 3.33
681 682 7.870509 ACACAGAGCAATTATGATATGTTGT 57.129 32.000 0.00 0.00 44.30 3.32
682 683 7.700505 ACACAGAGCAATTATGATATGTTGTG 58.299 34.615 0.00 0.00 44.30 3.33
683 684 7.553760 ACACAGAGCAATTATGATATGTTGTGA 59.446 33.333 0.00 0.00 44.30 3.58
684 685 7.854422 CACAGAGCAATTATGATATGTTGTGAC 59.146 37.037 0.00 0.00 44.30 3.67
685 686 7.012704 ACAGAGCAATTATGATATGTTGTGACC 59.987 37.037 0.00 0.00 44.30 4.02
686 687 6.488006 AGAGCAATTATGATATGTTGTGACCC 59.512 38.462 0.00 0.00 0.00 4.46
687 688 6.367983 AGCAATTATGATATGTTGTGACCCT 58.632 36.000 0.00 0.00 0.00 4.34
688 689 6.835488 AGCAATTATGATATGTTGTGACCCTT 59.165 34.615 0.00 0.00 0.00 3.95
689 690 7.342799 AGCAATTATGATATGTTGTGACCCTTT 59.657 33.333 0.00 0.00 0.00 3.11
690 691 7.436080 GCAATTATGATATGTTGTGACCCTTTG 59.564 37.037 0.00 0.00 0.00 2.77
691 692 8.685427 CAATTATGATATGTTGTGACCCTTTGA 58.315 33.333 0.00 0.00 0.00 2.69
692 693 8.821686 ATTATGATATGTTGTGACCCTTTGAA 57.178 30.769 0.00 0.00 0.00 2.69
693 694 8.821686 TTATGATATGTTGTGACCCTTTGAAT 57.178 30.769 0.00 0.00 0.00 2.57
694 695 7.722949 ATGATATGTTGTGACCCTTTGAATT 57.277 32.000 0.00 0.00 0.00 2.17
695 696 8.821686 ATGATATGTTGTGACCCTTTGAATTA 57.178 30.769 0.00 0.00 0.00 1.40
696 697 8.279970 TGATATGTTGTGACCCTTTGAATTAG 57.720 34.615 0.00 0.00 0.00 1.73
697 698 8.106462 TGATATGTTGTGACCCTTTGAATTAGA 58.894 33.333 0.00 0.00 0.00 2.10
698 699 8.877864 ATATGTTGTGACCCTTTGAATTAGAA 57.122 30.769 0.00 0.00 0.00 2.10
934 942 2.296073 TTTAACCCGTGGCCATTCTT 57.704 45.000 9.72 0.51 0.00 2.52
949 958 5.136105 GCCATTCTTTCTGTATCCCAATCT 58.864 41.667 0.00 0.00 0.00 2.40
974 986 0.912486 AAATCCCTAGCTGCGAAGGT 59.088 50.000 18.66 0.00 0.00 3.50
1035 1059 4.457496 CGTGCGCCATGGAGAGGT 62.457 66.667 20.86 0.00 0.00 3.85
1061 1085 2.681344 GGAACAACGTCTTCAACCAAGT 59.319 45.455 7.91 0.00 33.27 3.16
1190 1250 5.615289 AGTCACATCAGAGCTTAGTTTTGT 58.385 37.500 0.00 0.00 0.00 2.83
1584 1666 3.719924 TGGAAAGCTTGCAAATGACAAG 58.280 40.909 6.80 10.99 45.88 3.16
1742 1825 7.841956 AGTGTAGTGATTTATGCTCTAGTTGT 58.158 34.615 0.00 0.00 0.00 3.32
2118 2259 3.887621 TGGGATAAACTGGAGAACTCG 57.112 47.619 0.00 0.00 0.00 4.18
2155 2296 4.198530 TCTCATCACTGCAACAAGAACAA 58.801 39.130 0.00 0.00 0.00 2.83
2194 2335 4.090819 ACTTTCTGAACCTCTAGTCCTCC 58.909 47.826 0.00 0.00 0.00 4.30
2753 2955 1.246056 ATGAGCTTGCGCACCATGTT 61.246 50.000 11.12 0.00 39.10 2.71
2901 3133 2.368011 GGCGGGAAGAGGCTAAGGT 61.368 63.158 0.00 0.00 0.00 3.50
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.114616 CTCGGGCGCAGTTCACTG 61.115 66.667 10.83 2.31 46.40 3.66
3 4 4.314440 AAGCTCGGGCGCAGTTCA 62.314 61.111 10.83 0.00 44.37 3.18
4 5 3.491652 GAAGCTCGGGCGCAGTTC 61.492 66.667 10.83 0.00 44.37 3.01
12 13 3.382832 AGTGGACGGAAGCTCGGG 61.383 66.667 0.00 0.00 0.00 5.14
13 14 2.125912 CAGTGGACGGAAGCTCGG 60.126 66.667 0.00 0.00 0.00 4.63
14 15 2.811317 GCAGTGGACGGAAGCTCG 60.811 66.667 0.00 0.00 0.00 5.03
15 16 2.435059 GGCAGTGGACGGAAGCTC 60.435 66.667 0.00 0.00 0.00 4.09
16 17 2.925170 AGGCAGTGGACGGAAGCT 60.925 61.111 0.00 0.00 0.00 3.74
17 18 2.743928 CAGGCAGTGGACGGAAGC 60.744 66.667 0.00 0.00 0.00 3.86
18 19 2.743928 GCAGGCAGTGGACGGAAG 60.744 66.667 0.00 0.00 0.00 3.46
19 20 3.535629 CTGCAGGCAGTGGACGGAA 62.536 63.158 13.02 0.00 39.10 4.30
20 21 4.007644 CTGCAGGCAGTGGACGGA 62.008 66.667 13.02 0.00 39.10 4.69
22 23 4.694233 AGCTGCAGGCAGTGGACG 62.694 66.667 21.19 0.00 45.24 4.79
23 24 2.745492 GAGCTGCAGGCAGTGGAC 60.745 66.667 21.19 5.90 45.24 4.02
24 25 2.133359 AATGAGCTGCAGGCAGTGGA 62.133 55.000 21.19 6.88 45.24 4.02
25 26 1.248785 AAATGAGCTGCAGGCAGTGG 61.249 55.000 21.19 0.00 45.24 4.00
26 27 0.109272 CAAATGAGCTGCAGGCAGTG 60.109 55.000 21.19 7.86 45.24 3.66
27 28 1.248785 CCAAATGAGCTGCAGGCAGT 61.249 55.000 21.19 9.22 45.24 4.40
28 29 1.248785 ACCAAATGAGCTGCAGGCAG 61.249 55.000 17.12 16.68 46.15 4.85
29 30 0.828762 AACCAAATGAGCTGCAGGCA 60.829 50.000 17.12 0.00 44.79 4.75
30 31 0.108945 GAACCAAATGAGCTGCAGGC 60.109 55.000 17.12 7.98 42.19 4.85
31 32 1.250328 TGAACCAAATGAGCTGCAGG 58.750 50.000 17.12 0.00 0.00 4.85
32 33 2.295349 ACTTGAACCAAATGAGCTGCAG 59.705 45.455 10.11 10.11 0.00 4.41
33 34 2.309613 ACTTGAACCAAATGAGCTGCA 58.690 42.857 1.02 0.00 0.00 4.41
34 35 3.375782 AACTTGAACCAAATGAGCTGC 57.624 42.857 0.00 0.00 0.00 5.25
35 36 4.741676 GTGAAACTTGAACCAAATGAGCTG 59.258 41.667 0.00 0.00 0.00 4.24
36 37 4.498009 CGTGAAACTTGAACCAAATGAGCT 60.498 41.667 0.00 0.00 31.75 4.09
37 38 3.730715 CGTGAAACTTGAACCAAATGAGC 59.269 43.478 0.00 0.00 31.75 4.26
38 39 4.734854 CACGTGAAACTTGAACCAAATGAG 59.265 41.667 10.90 0.00 38.55 2.90
39 40 4.156922 ACACGTGAAACTTGAACCAAATGA 59.843 37.500 25.01 0.00 38.55 2.57
40 41 4.265085 CACACGTGAAACTTGAACCAAATG 59.735 41.667 25.01 0.00 38.55 2.32
41 42 4.420168 CACACGTGAAACTTGAACCAAAT 58.580 39.130 25.01 0.00 38.55 2.32
42 43 3.827625 CACACGTGAAACTTGAACCAAA 58.172 40.909 25.01 0.00 38.55 3.28
43 44 2.414824 GCACACGTGAAACTTGAACCAA 60.415 45.455 25.01 0.00 38.55 3.67
44 45 1.131504 GCACACGTGAAACTTGAACCA 59.868 47.619 25.01 0.00 38.55 3.67
45 46 1.822581 GCACACGTGAAACTTGAACC 58.177 50.000 25.01 0.00 38.55 3.62
46 47 1.452717 CGCACACGTGAAACTTGAAC 58.547 50.000 25.01 0.00 38.55 3.18
47 48 3.887777 CGCACACGTGAAACTTGAA 57.112 47.368 25.01 0.00 38.55 2.69
59 60 2.751436 ATCCATGGCCACGCACAC 60.751 61.111 8.16 0.00 0.00 3.82
60 61 2.751036 CATCCATGGCCACGCACA 60.751 61.111 8.16 0.00 0.00 4.57
61 62 2.751436 ACATCCATGGCCACGCAC 60.751 61.111 8.16 0.00 0.00 5.34
62 63 2.751036 CACATCCATGGCCACGCA 60.751 61.111 8.16 0.00 0.00 5.24
63 64 4.197498 GCACATCCATGGCCACGC 62.197 66.667 8.16 3.43 0.00 5.34
64 65 2.751036 TGCACATCCATGGCCACG 60.751 61.111 8.16 0.00 0.00 4.94
65 66 0.394216 TACTGCACATCCATGGCCAC 60.394 55.000 8.16 0.00 0.00 5.01
66 67 0.394216 GTACTGCACATCCATGGCCA 60.394 55.000 8.56 8.56 0.00 5.36
67 68 1.439353 CGTACTGCACATCCATGGCC 61.439 60.000 6.96 0.00 0.00 5.36
68 69 1.439353 CCGTACTGCACATCCATGGC 61.439 60.000 6.96 0.00 0.00 4.40
69 70 1.439353 GCCGTACTGCACATCCATGG 61.439 60.000 4.97 4.97 0.00 3.66
70 71 0.744057 TGCCGTACTGCACATCCATG 60.744 55.000 7.99 0.00 36.04 3.66
71 72 0.462581 CTGCCGTACTGCACATCCAT 60.463 55.000 7.99 0.00 36.04 3.41
72 73 1.079197 CTGCCGTACTGCACATCCA 60.079 57.895 7.99 0.00 36.04 3.41
73 74 1.079127 ACTGCCGTACTGCACATCC 60.079 57.895 7.99 0.00 36.04 3.51
74 75 1.970917 GCACTGCCGTACTGCACATC 61.971 60.000 7.99 0.00 36.04 3.06
75 76 2.034879 GCACTGCCGTACTGCACAT 61.035 57.895 7.99 0.00 36.04 3.21
76 77 2.664851 GCACTGCCGTACTGCACA 60.665 61.111 7.99 0.00 36.04 4.57
77 78 2.664851 TGCACTGCCGTACTGCAC 60.665 61.111 7.99 0.00 36.00 4.57
78 79 2.664851 GTGCACTGCCGTACTGCA 60.665 61.111 10.32 11.67 38.60 4.41
79 80 1.970917 GATGTGCACTGCCGTACTGC 61.971 60.000 19.41 1.80 0.00 4.40
80 81 1.686566 CGATGTGCACTGCCGTACTG 61.687 60.000 19.41 0.00 0.00 2.74
81 82 1.446099 CGATGTGCACTGCCGTACT 60.446 57.895 19.41 0.00 0.00 2.73
82 83 1.736645 ACGATGTGCACTGCCGTAC 60.737 57.895 22.82 6.28 0.00 3.67
83 84 1.736282 CACGATGTGCACTGCCGTA 60.736 57.895 23.34 3.42 31.83 4.02
84 85 3.043713 CACGATGTGCACTGCCGT 61.044 61.111 19.41 19.82 0.00 5.68
109 110 4.007644 TGTGGACTGCGCAGAGGG 62.008 66.667 42.03 18.91 0.00 4.30
110 111 2.740055 GTGTGGACTGCGCAGAGG 60.740 66.667 42.03 19.32 0.00 3.69
111 112 1.159713 TTTGTGTGGACTGCGCAGAG 61.160 55.000 42.03 20.13 0.00 3.35
112 113 0.746204 TTTTGTGTGGACTGCGCAGA 60.746 50.000 42.03 19.24 0.00 4.26
113 114 0.100325 TTTTTGTGTGGACTGCGCAG 59.900 50.000 34.89 34.89 0.00 5.18
114 115 2.184323 TTTTTGTGTGGACTGCGCA 58.816 47.368 10.98 10.98 0.00 6.09
129 130 0.831711 ATTGGTGCCCGAGCCTTTTT 60.832 50.000 0.00 0.00 38.69 1.94
130 131 0.831711 AATTGGTGCCCGAGCCTTTT 60.832 50.000 0.00 0.00 38.69 2.27
131 132 0.831711 AAATTGGTGCCCGAGCCTTT 60.832 50.000 0.00 0.00 38.69 3.11
132 133 1.228862 AAATTGGTGCCCGAGCCTT 60.229 52.632 0.00 0.00 38.69 4.35
133 134 1.978617 CAAATTGGTGCCCGAGCCT 60.979 57.895 0.00 0.00 38.69 4.58
134 135 2.275380 ACAAATTGGTGCCCGAGCC 61.275 57.895 0.00 0.00 38.69 4.70
135 136 1.080569 CACAAATTGGTGCCCGAGC 60.081 57.895 0.00 0.00 40.48 5.03
136 137 0.039256 CACACAAATTGGTGCCCGAG 60.039 55.000 13.13 0.00 42.55 4.63
137 138 1.459455 CCACACAAATTGGTGCCCGA 61.459 55.000 13.13 0.00 42.55 5.14
138 139 1.006337 CCACACAAATTGGTGCCCG 60.006 57.895 13.13 2.03 42.55 6.13
139 140 1.301637 GCCACACAAATTGGTGCCC 60.302 57.895 13.13 0.00 42.55 5.36
140 141 0.600782 CAGCCACACAAATTGGTGCC 60.601 55.000 13.13 2.12 42.55 5.01
141 142 0.600782 CCAGCCACACAAATTGGTGC 60.601 55.000 13.13 0.00 42.55 5.01
142 143 0.600782 GCCAGCCACACAAATTGGTG 60.601 55.000 11.62 11.62 44.35 4.17
143 144 0.760189 AGCCAGCCACACAAATTGGT 60.760 50.000 0.00 0.00 36.40 3.67
144 145 1.255882 TAGCCAGCCACACAAATTGG 58.744 50.000 0.00 0.00 37.17 3.16
145 146 2.676076 GTTAGCCAGCCACACAAATTG 58.324 47.619 0.00 0.00 0.00 2.32
146 147 1.269448 CGTTAGCCAGCCACACAAATT 59.731 47.619 0.00 0.00 0.00 1.82
147 148 0.881118 CGTTAGCCAGCCACACAAAT 59.119 50.000 0.00 0.00 0.00 2.32
148 149 1.791103 GCGTTAGCCAGCCACACAAA 61.791 55.000 0.00 0.00 37.42 2.83
149 150 2.258013 GCGTTAGCCAGCCACACAA 61.258 57.895 0.00 0.00 37.42 3.33
150 151 2.668212 GCGTTAGCCAGCCACACA 60.668 61.111 0.00 0.00 37.42 3.72
151 152 1.982073 GATGCGTTAGCCAGCCACAC 61.982 60.000 0.00 0.00 44.33 3.82
152 153 1.745115 GATGCGTTAGCCAGCCACA 60.745 57.895 0.00 0.00 44.33 4.17
153 154 2.813179 CGATGCGTTAGCCAGCCAC 61.813 63.158 0.00 0.00 44.33 5.01
154 155 2.511373 CGATGCGTTAGCCAGCCA 60.511 61.111 0.00 0.00 44.33 4.75
155 156 2.971428 TAGCGATGCGTTAGCCAGCC 62.971 60.000 4.05 0.00 44.33 4.85
156 157 0.946221 ATAGCGATGCGTTAGCCAGC 60.946 55.000 4.05 0.00 44.33 4.85
157 158 0.786581 CATAGCGATGCGTTAGCCAG 59.213 55.000 0.00 0.00 44.33 4.85
158 159 0.387565 TCATAGCGATGCGTTAGCCA 59.612 50.000 1.33 0.00 44.33 4.75
159 160 1.063806 CTCATAGCGATGCGTTAGCC 58.936 55.000 1.33 0.00 44.33 3.93
160 161 0.436531 GCTCATAGCGATGCGTTAGC 59.563 55.000 1.33 2.39 45.41 3.09
171 172 1.141019 TGAACCGGTCGCTCATAGC 59.859 57.895 8.04 0.00 38.02 2.97
172 173 0.456221 AGTGAACCGGTCGCTCATAG 59.544 55.000 8.04 0.00 43.97 2.23
173 174 0.892755 AAGTGAACCGGTCGCTCATA 59.107 50.000 8.04 0.00 46.69 2.15
174 175 0.389948 GAAGTGAACCGGTCGCTCAT 60.390 55.000 8.04 0.00 46.69 2.90
175 176 1.006571 GAAGTGAACCGGTCGCTCA 60.007 57.895 8.04 5.21 46.69 4.26
176 177 0.319641 AAGAAGTGAACCGGTCGCTC 60.320 55.000 8.04 1.75 46.69 5.03
178 179 0.942252 AAAAGAAGTGAACCGGTCGC 59.058 50.000 8.04 8.59 36.98 5.19
179 180 4.799419 TTAAAAAGAAGTGAACCGGTCG 57.201 40.909 8.04 0.00 0.00 4.79
180 181 5.458015 CCATTAAAAAGAAGTGAACCGGTC 58.542 41.667 8.04 1.72 0.00 4.79
181 182 4.279922 CCCATTAAAAAGAAGTGAACCGGT 59.720 41.667 0.00 0.00 0.00 5.28
182 183 4.521256 TCCCATTAAAAAGAAGTGAACCGG 59.479 41.667 0.00 0.00 0.00 5.28
183 184 5.699097 TCCCATTAAAAAGAAGTGAACCG 57.301 39.130 0.00 0.00 0.00 4.44
184 185 6.398095 CCATCCCATTAAAAAGAAGTGAACC 58.602 40.000 0.00 0.00 0.00 3.62
185 186 6.210584 TCCCATCCCATTAAAAAGAAGTGAAC 59.789 38.462 0.00 0.00 0.00 3.18
186 187 6.318913 TCCCATCCCATTAAAAAGAAGTGAA 58.681 36.000 0.00 0.00 0.00 3.18
187 188 5.898120 TCCCATCCCATTAAAAAGAAGTGA 58.102 37.500 0.00 0.00 0.00 3.41
188 189 5.127682 CCTCCCATCCCATTAAAAAGAAGTG 59.872 44.000 0.00 0.00 0.00 3.16
189 190 5.272402 CCTCCCATCCCATTAAAAAGAAGT 58.728 41.667 0.00 0.00 0.00 3.01
190 191 4.100035 GCCTCCCATCCCATTAAAAAGAAG 59.900 45.833 0.00 0.00 0.00 2.85
191 192 4.030216 GCCTCCCATCCCATTAAAAAGAA 58.970 43.478 0.00 0.00 0.00 2.52
192 193 3.642141 GCCTCCCATCCCATTAAAAAGA 58.358 45.455 0.00 0.00 0.00 2.52
193 194 2.362077 CGCCTCCCATCCCATTAAAAAG 59.638 50.000 0.00 0.00 0.00 2.27
194 195 2.383855 CGCCTCCCATCCCATTAAAAA 58.616 47.619 0.00 0.00 0.00 1.94
195 196 2.026905 GCGCCTCCCATCCCATTAAAA 61.027 52.381 0.00 0.00 0.00 1.52
196 197 0.467290 GCGCCTCCCATCCCATTAAA 60.467 55.000 0.00 0.00 0.00 1.52
197 198 1.150536 GCGCCTCCCATCCCATTAA 59.849 57.895 0.00 0.00 0.00 1.40
198 199 1.426251 ATGCGCCTCCCATCCCATTA 61.426 55.000 4.18 0.00 0.00 1.90
199 200 2.302517 AATGCGCCTCCCATCCCATT 62.303 55.000 4.18 0.00 0.00 3.16
200 201 2.302517 AAATGCGCCTCCCATCCCAT 62.303 55.000 4.18 0.00 0.00 4.00
201 202 2.909457 GAAATGCGCCTCCCATCCCA 62.909 60.000 4.18 0.00 0.00 4.37
202 203 2.123726 AAATGCGCCTCCCATCCC 60.124 61.111 4.18 0.00 0.00 3.85
203 204 1.453745 TGAAATGCGCCTCCCATCC 60.454 57.895 4.18 0.00 0.00 3.51
204 205 0.749454 AGTGAAATGCGCCTCCCATC 60.749 55.000 4.18 0.00 0.00 3.51
205 206 0.323725 AAGTGAAATGCGCCTCCCAT 60.324 50.000 4.18 0.00 0.00 4.00
206 207 0.326595 TAAGTGAAATGCGCCTCCCA 59.673 50.000 4.18 0.00 0.00 4.37
207 208 1.680338 ATAAGTGAAATGCGCCTCCC 58.320 50.000 4.18 0.00 0.00 4.30
208 209 6.743575 AATATATAAGTGAAATGCGCCTCC 57.256 37.500 4.18 0.00 0.00 4.30
209 210 8.076178 ACAAAATATATAAGTGAAATGCGCCTC 58.924 33.333 4.18 0.00 0.00 4.70
210 211 7.862372 CACAAAATATATAAGTGAAATGCGCCT 59.138 33.333 4.18 0.00 32.14 5.52
211 212 7.358352 GCACAAAATATATAAGTGAAATGCGCC 60.358 37.037 4.18 0.00 32.14 6.53
212 213 7.167302 TGCACAAAATATATAAGTGAAATGCGC 59.833 33.333 0.00 0.00 32.14 6.09
213 214 8.559222 TGCACAAAATATATAAGTGAAATGCG 57.441 30.769 13.32 0.00 32.14 4.73
214 215 8.482429 GCTGCACAAAATATATAAGTGAAATGC 58.518 33.333 13.32 6.75 32.14 3.56
215 216 9.740239 AGCTGCACAAAATATATAAGTGAAATG 57.260 29.630 1.02 4.38 32.14 2.32
216 217 9.956720 GAGCTGCACAAAATATATAAGTGAAAT 57.043 29.630 1.02 0.00 32.14 2.17
217 218 8.122330 CGAGCTGCACAAAATATATAAGTGAAA 58.878 33.333 1.02 3.59 32.14 2.69
218 219 7.254761 CCGAGCTGCACAAAATATATAAGTGAA 60.255 37.037 1.02 5.04 32.14 3.18
219 220 6.202762 CCGAGCTGCACAAAATATATAAGTGA 59.797 38.462 1.02 2.45 32.14 3.41
220 221 6.365839 CCGAGCTGCACAAAATATATAAGTG 58.634 40.000 1.02 7.42 0.00 3.16
221 222 5.049405 GCCGAGCTGCACAAAATATATAAGT 60.049 40.000 1.02 0.00 0.00 2.24
222 223 5.385617 GCCGAGCTGCACAAAATATATAAG 58.614 41.667 1.02 0.00 0.00 1.73
223 224 4.215399 GGCCGAGCTGCACAAAATATATAA 59.785 41.667 1.02 0.00 0.00 0.98
224 225 3.751175 GGCCGAGCTGCACAAAATATATA 59.249 43.478 1.02 0.00 0.00 0.86
225 226 2.554032 GGCCGAGCTGCACAAAATATAT 59.446 45.455 1.02 0.00 0.00 0.86
226 227 1.946768 GGCCGAGCTGCACAAAATATA 59.053 47.619 1.02 0.00 0.00 0.86
227 228 0.740737 GGCCGAGCTGCACAAAATAT 59.259 50.000 1.02 0.00 0.00 1.28
228 229 1.312371 GGGCCGAGCTGCACAAAATA 61.312 55.000 1.02 0.00 33.82 1.40
229 230 2.639327 GGGCCGAGCTGCACAAAAT 61.639 57.895 1.02 0.00 33.82 1.82
230 231 3.294493 GGGCCGAGCTGCACAAAA 61.294 61.111 1.02 0.00 33.82 2.44
231 232 4.577677 TGGGCCGAGCTGCACAAA 62.578 61.111 0.00 0.00 42.87 2.83
240 241 2.110967 CATGTTGCTCTGGGCCGAG 61.111 63.158 8.78 8.78 40.92 4.63
241 242 2.046023 CATGTTGCTCTGGGCCGA 60.046 61.111 0.00 0.00 40.92 5.54
242 243 3.818787 GCATGTTGCTCTGGGCCG 61.819 66.667 0.00 0.00 40.96 6.13
243 244 3.818787 CGCATGTTGCTCTGGGCC 61.819 66.667 0.00 0.00 42.25 5.80
244 245 3.818787 CCGCATGTTGCTCTGGGC 61.819 66.667 0.00 0.00 42.25 5.36
245 246 3.818787 GCCGCATGTTGCTCTGGG 61.819 66.667 0.00 0.00 42.25 4.45
246 247 2.749044 AGCCGCATGTTGCTCTGG 60.749 61.111 5.42 0.00 42.25 3.86
250 251 0.877649 CGATAGAGCCGCATGTTGCT 60.878 55.000 10.35 10.35 39.23 3.91
251 252 1.566563 CGATAGAGCCGCATGTTGC 59.433 57.895 0.00 0.00 38.20 4.17
252 253 1.835483 GCCGATAGAGCCGCATGTTG 61.835 60.000 0.00 0.00 39.76 3.33
253 254 1.595382 GCCGATAGAGCCGCATGTT 60.595 57.895 0.00 0.00 39.76 2.71
254 255 2.029666 GCCGATAGAGCCGCATGT 59.970 61.111 0.00 0.00 39.76 3.21
255 256 3.108289 CGCCGATAGAGCCGCATG 61.108 66.667 0.00 0.00 39.76 4.06
256 257 4.363990 CCGCCGATAGAGCCGCAT 62.364 66.667 0.00 0.00 39.76 4.73
262 263 4.286320 AAGCCGCCGCCGATAGAG 62.286 66.667 0.00 0.00 36.29 2.43
263 264 4.585526 CAAGCCGCCGCCGATAGA 62.586 66.667 0.00 0.00 36.29 1.98
273 274 4.090057 GTCGGAACTGCAAGCCGC 62.090 66.667 14.62 7.96 44.45 6.53
274 275 3.423154 GGTCGGAACTGCAAGCCG 61.423 66.667 13.58 13.58 46.08 5.52
275 276 2.281484 TGGTCGGAACTGCAAGCC 60.281 61.111 0.00 0.00 37.60 4.35
276 277 2.946762 GTGGTCGGAACTGCAAGC 59.053 61.111 0.00 0.00 37.60 4.01
277 278 1.284982 CTCGTGGTCGGAACTGCAAG 61.285 60.000 0.00 0.00 37.59 4.01
278 279 1.300620 CTCGTGGTCGGAACTGCAA 60.301 57.895 0.00 0.00 37.69 4.08
279 280 2.338620 CTCGTGGTCGGAACTGCA 59.661 61.111 0.00 0.00 37.69 4.41
280 281 3.112709 GCTCGTGGTCGGAACTGC 61.113 66.667 0.00 0.00 37.69 4.40
281 282 2.432628 GGCTCGTGGTCGGAACTG 60.433 66.667 0.00 0.00 37.69 3.16
282 283 3.692406 GGGCTCGTGGTCGGAACT 61.692 66.667 0.00 0.00 37.69 3.01
283 284 3.310860 ATGGGCTCGTGGTCGGAAC 62.311 63.158 0.00 0.00 37.69 3.62
284 285 3.000819 ATGGGCTCGTGGTCGGAA 61.001 61.111 0.00 0.00 37.69 4.30
285 286 3.770040 CATGGGCTCGTGGTCGGA 61.770 66.667 0.00 0.00 37.69 4.55
287 288 4.758251 TGCATGGGCTCGTGGTCG 62.758 66.667 8.15 0.00 41.91 4.79
288 289 2.238847 TACTGCATGGGCTCGTGGTC 62.239 60.000 8.15 0.00 41.91 4.02
289 290 2.290287 TACTGCATGGGCTCGTGGT 61.290 57.895 8.15 0.06 41.91 4.16
290 291 1.815421 GTACTGCATGGGCTCGTGG 60.815 63.158 8.15 0.00 41.91 4.94
291 292 2.167219 CGTACTGCATGGGCTCGTG 61.167 63.158 0.00 0.00 41.91 4.35
292 293 2.184322 CGTACTGCATGGGCTCGT 59.816 61.111 0.00 0.00 41.91 4.18
293 294 3.264897 GCGTACTGCATGGGCTCG 61.265 66.667 0.00 0.00 45.45 5.03
302 303 4.436998 AGGGCGTCAGCGTACTGC 62.437 66.667 0.00 2.08 46.35 4.40
303 304 2.202623 GAGGGCGTCAGCGTACTG 60.203 66.667 1.64 0.00 46.35 2.74
304 305 3.450115 GGAGGGCGTCAGCGTACT 61.450 66.667 9.66 0.00 46.35 2.73
305 306 3.077519 ATGGAGGGCGTCAGCGTAC 62.078 63.158 9.66 0.00 46.35 3.67
306 307 2.758327 ATGGAGGGCGTCAGCGTA 60.758 61.111 9.66 0.00 46.35 4.42
307 308 4.457496 CATGGAGGGCGTCAGCGT 62.457 66.667 9.66 0.00 46.35 5.07
308 309 3.958147 AACATGGAGGGCGTCAGCG 62.958 63.158 9.66 0.00 46.35 5.18
309 310 2.045926 AACATGGAGGGCGTCAGC 60.046 61.111 9.66 0.00 44.18 4.26
310 311 1.450312 GGAACATGGAGGGCGTCAG 60.450 63.158 9.66 1.08 0.00 3.51
311 312 2.668632 GGAACATGGAGGGCGTCA 59.331 61.111 9.66 0.00 0.00 4.35
312 313 2.124695 GGGAACATGGAGGGCGTC 60.125 66.667 0.00 0.00 0.00 5.19
313 314 3.728373 GGGGAACATGGAGGGCGT 61.728 66.667 0.00 0.00 0.00 5.68
314 315 2.965716 GATGGGGAACATGGAGGGCG 62.966 65.000 0.00 0.00 40.72 6.13
315 316 1.152673 GATGGGGAACATGGAGGGC 60.153 63.158 0.00 0.00 40.72 5.19
316 317 0.475906 GAGATGGGGAACATGGAGGG 59.524 60.000 0.00 0.00 40.72 4.30
317 318 0.475906 GGAGATGGGGAACATGGAGG 59.524 60.000 0.00 0.00 40.72 4.30
318 319 1.133976 GTGGAGATGGGGAACATGGAG 60.134 57.143 0.00 0.00 40.72 3.86
319 320 0.918983 GTGGAGATGGGGAACATGGA 59.081 55.000 0.00 0.00 40.72 3.41
320 321 0.921896 AGTGGAGATGGGGAACATGG 59.078 55.000 0.00 0.00 40.72 3.66
321 322 2.372264 CAAGTGGAGATGGGGAACATG 58.628 52.381 0.00 0.00 40.72 3.21
322 323 1.341383 GCAAGTGGAGATGGGGAACAT 60.341 52.381 0.00 0.00 44.18 2.71
323 324 0.038166 GCAAGTGGAGATGGGGAACA 59.962 55.000 0.00 0.00 0.00 3.18
324 325 0.038166 TGCAAGTGGAGATGGGGAAC 59.962 55.000 0.00 0.00 0.00 3.62
325 326 0.329261 CTGCAAGTGGAGATGGGGAA 59.671 55.000 0.00 0.00 35.31 3.97
326 327 1.993653 CTGCAAGTGGAGATGGGGA 59.006 57.895 0.00 0.00 35.31 4.81
327 328 4.651867 CTGCAAGTGGAGATGGGG 57.348 61.111 0.00 0.00 35.31 4.96
347 348 1.073964 CTTCACGCATCCAGTGACTG 58.926 55.000 5.42 5.42 46.81 3.51
348 349 0.969149 TCTTCACGCATCCAGTGACT 59.031 50.000 0.00 0.00 46.81 3.41
349 350 1.461127 GTTCTTCACGCATCCAGTGAC 59.539 52.381 0.00 0.00 46.81 3.67
350 351 1.795768 GTTCTTCACGCATCCAGTGA 58.204 50.000 0.00 0.00 45.68 3.41
351 352 0.439985 CGTTCTTCACGCATCCAGTG 59.560 55.000 0.00 0.00 43.37 3.66
352 353 2.827604 CGTTCTTCACGCATCCAGT 58.172 52.632 0.00 0.00 43.37 4.00
362 363 2.548057 GCATCCAGTGAAACGTTCTTCA 59.452 45.455 0.00 0.00 45.86 3.02
363 364 2.411547 CGCATCCAGTGAAACGTTCTTC 60.412 50.000 0.00 0.00 45.86 2.87
364 365 1.531149 CGCATCCAGTGAAACGTTCTT 59.469 47.619 0.00 0.00 45.86 2.52
365 366 1.148310 CGCATCCAGTGAAACGTTCT 58.852 50.000 0.00 0.00 45.86 3.01
366 367 0.865769 ACGCATCCAGTGAAACGTTC 59.134 50.000 0.00 0.00 45.86 3.95
367 368 0.865769 GACGCATCCAGTGAAACGTT 59.134 50.000 0.00 0.00 45.86 3.99
368 369 0.033504 AGACGCATCCAGTGAAACGT 59.966 50.000 0.00 0.00 45.86 3.99
369 370 1.990799 TAGACGCATCCAGTGAAACG 58.009 50.000 0.00 0.00 45.86 3.60
370 371 4.742438 TTTTAGACGCATCCAGTGAAAC 57.258 40.909 0.00 0.00 0.00 2.78
371 372 4.759693 ACATTTTAGACGCATCCAGTGAAA 59.240 37.500 0.00 0.00 0.00 2.69
372 373 4.323417 ACATTTTAGACGCATCCAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
373 374 3.932710 GACATTTTAGACGCATCCAGTGA 59.067 43.478 0.00 0.00 0.00 3.41
374 375 3.684305 TGACATTTTAGACGCATCCAGTG 59.316 43.478 0.00 0.00 0.00 3.66
375 376 3.937814 TGACATTTTAGACGCATCCAGT 58.062 40.909 0.00 0.00 0.00 4.00
376 377 5.755375 ACTATGACATTTTAGACGCATCCAG 59.245 40.000 0.00 0.00 0.00 3.86
377 378 5.523552 CACTATGACATTTTAGACGCATCCA 59.476 40.000 0.00 0.00 0.00 3.41
378 379 5.523916 ACACTATGACATTTTAGACGCATCC 59.476 40.000 0.00 0.00 0.00 3.51
379 380 6.589830 ACACTATGACATTTTAGACGCATC 57.410 37.500 0.00 0.00 0.00 3.91
380 381 6.593770 TCAACACTATGACATTTTAGACGCAT 59.406 34.615 0.00 0.00 0.00 4.73
381 382 5.929415 TCAACACTATGACATTTTAGACGCA 59.071 36.000 0.00 0.00 0.00 5.24
382 383 6.403333 TCAACACTATGACATTTTAGACGC 57.597 37.500 0.00 0.00 0.00 5.19
383 384 6.901887 GCATCAACACTATGACATTTTAGACG 59.098 38.462 0.00 0.00 30.82 4.18
384 385 7.751732 TGCATCAACACTATGACATTTTAGAC 58.248 34.615 0.00 0.00 30.82 2.59
385 386 7.920160 TGCATCAACACTATGACATTTTAGA 57.080 32.000 0.00 0.00 30.82 2.10
386 387 8.969121 TTTGCATCAACACTATGACATTTTAG 57.031 30.769 0.00 0.00 30.82 1.85
387 388 9.356433 CATTTGCATCAACACTATGACATTTTA 57.644 29.630 0.00 0.00 30.82 1.52
388 389 8.089597 TCATTTGCATCAACACTATGACATTTT 58.910 29.630 0.00 0.00 30.82 1.82
389 390 7.543172 GTCATTTGCATCAACACTATGACATTT 59.457 33.333 13.12 0.00 39.42 2.32
390 391 7.031372 GTCATTTGCATCAACACTATGACATT 58.969 34.615 13.12 0.00 39.42 2.71
391 392 6.151480 TGTCATTTGCATCAACACTATGACAT 59.849 34.615 15.26 0.00 41.80 3.06
392 393 5.472820 TGTCATTTGCATCAACACTATGACA 59.527 36.000 15.26 15.26 43.02 3.58
393 394 5.941733 TGTCATTTGCATCAACACTATGAC 58.058 37.500 11.93 11.93 39.73 3.06
394 395 5.939296 TCTGTCATTTGCATCAACACTATGA 59.061 36.000 0.00 0.00 0.00 2.15
395 396 6.185852 TCTGTCATTTGCATCAACACTATG 57.814 37.500 0.00 0.00 0.00 2.23
396 397 6.827251 AGATCTGTCATTTGCATCAACACTAT 59.173 34.615 0.00 0.00 0.00 2.12
397 398 6.175471 AGATCTGTCATTTGCATCAACACTA 58.825 36.000 0.00 0.00 0.00 2.74
398 399 5.008331 AGATCTGTCATTTGCATCAACACT 58.992 37.500 0.00 0.00 0.00 3.55
399 400 5.306532 AGATCTGTCATTTGCATCAACAC 57.693 39.130 0.00 0.00 0.00 3.32
400 401 5.970317 AAGATCTGTCATTTGCATCAACA 57.030 34.783 0.00 0.00 0.00 3.33
401 402 6.627690 CAAAGATCTGTCATTTGCATCAAC 57.372 37.500 0.00 0.00 0.00 3.18
408 409 7.884816 AAAATCAGCAAAGATCTGTCATTTG 57.115 32.000 0.00 0.00 37.07 2.32
409 410 8.579006 TGTAAAATCAGCAAAGATCTGTCATTT 58.421 29.630 0.00 0.00 33.48 2.32
410 411 8.114331 TGTAAAATCAGCAAAGATCTGTCATT 57.886 30.769 0.00 0.00 33.48 2.57
411 412 7.692460 TGTAAAATCAGCAAAGATCTGTCAT 57.308 32.000 0.00 0.00 33.48 3.06
412 413 7.509141 TTGTAAAATCAGCAAAGATCTGTCA 57.491 32.000 0.00 0.00 33.48 3.58
413 414 7.327032 GGTTTGTAAAATCAGCAAAGATCTGTC 59.673 37.037 0.00 0.00 33.50 3.51
414 415 7.014615 AGGTTTGTAAAATCAGCAAAGATCTGT 59.985 33.333 0.00 0.00 33.50 3.41
415 416 7.327761 CAGGTTTGTAAAATCAGCAAAGATCTG 59.672 37.037 0.00 0.00 33.50 2.90
416 417 7.014615 ACAGGTTTGTAAAATCAGCAAAGATCT 59.985 33.333 0.00 0.00 35.25 2.75
417 418 7.147976 ACAGGTTTGTAAAATCAGCAAAGATC 58.852 34.615 0.00 0.00 35.25 2.75
418 419 7.054491 ACAGGTTTGTAAAATCAGCAAAGAT 57.946 32.000 0.00 0.00 35.25 2.40
419 420 6.463995 ACAGGTTTGTAAAATCAGCAAAGA 57.536 33.333 0.00 0.00 35.25 2.52
420 421 7.401080 CAAACAGGTTTGTAAAATCAGCAAAG 58.599 34.615 15.03 0.00 43.52 2.77
421 422 6.314896 CCAAACAGGTTTGTAAAATCAGCAAA 59.685 34.615 20.00 0.00 46.19 3.68
422 423 5.814705 CCAAACAGGTTTGTAAAATCAGCAA 59.185 36.000 20.00 0.00 46.19 3.91
423 424 5.355596 CCAAACAGGTTTGTAAAATCAGCA 58.644 37.500 20.00 0.00 46.19 4.41
424 425 4.211164 GCCAAACAGGTTTGTAAAATCAGC 59.789 41.667 20.00 11.63 46.19 4.26
425 426 5.355596 TGCCAAACAGGTTTGTAAAATCAG 58.644 37.500 20.00 6.64 46.19 2.90
426 427 5.344743 TGCCAAACAGGTTTGTAAAATCA 57.655 34.783 20.00 8.00 46.19 2.57
427 428 5.905480 CTGCCAAACAGGTTTGTAAAATC 57.095 39.130 20.00 6.08 46.19 2.17
439 440 4.599047 TTTACCAAATCCTGCCAAACAG 57.401 40.909 0.00 0.00 46.77 3.16
440 441 5.070981 TCAATTTACCAAATCCTGCCAAACA 59.929 36.000 0.00 0.00 0.00 2.83
441 442 5.546526 TCAATTTACCAAATCCTGCCAAAC 58.453 37.500 0.00 0.00 0.00 2.93
442 443 5.815233 TCAATTTACCAAATCCTGCCAAA 57.185 34.783 0.00 0.00 0.00 3.28
443 444 6.371595 AATCAATTTACCAAATCCTGCCAA 57.628 33.333 0.00 0.00 0.00 4.52
444 445 6.894654 TCTAATCAATTTACCAAATCCTGCCA 59.105 34.615 0.00 0.00 0.00 4.92
445 446 7.203218 GTCTAATCAATTTACCAAATCCTGCC 58.797 38.462 0.00 0.00 0.00 4.85
446 447 7.147915 TGGTCTAATCAATTTACCAAATCCTGC 60.148 37.037 7.01 0.00 37.29 4.85
447 448 8.292444 TGGTCTAATCAATTTACCAAATCCTG 57.708 34.615 7.01 0.00 37.29 3.86
448 449 8.893563 TTGGTCTAATCAATTTACCAAATCCT 57.106 30.769 14.90 0.00 44.87 3.24
449 450 8.197439 CCTTGGTCTAATCAATTTACCAAATCC 58.803 37.037 16.66 0.00 46.51 3.01
450 451 8.197439 CCCTTGGTCTAATCAATTTACCAAATC 58.803 37.037 16.66 0.00 46.51 2.17
451 452 7.898636 TCCCTTGGTCTAATCAATTTACCAAAT 59.101 33.333 16.66 0.00 46.51 2.32
452 453 7.242359 TCCCTTGGTCTAATCAATTTACCAAA 58.758 34.615 16.66 6.32 46.51 3.28
453 454 6.795590 TCCCTTGGTCTAATCAATTTACCAA 58.204 36.000 15.76 15.76 45.47 3.67
454 455 6.395780 TCCCTTGGTCTAATCAATTTACCA 57.604 37.500 5.85 5.85 38.42 3.25
455 456 7.898014 ATTCCCTTGGTCTAATCAATTTACC 57.102 36.000 0.00 0.00 0.00 2.85
456 457 9.586435 CAAATTCCCTTGGTCTAATCAATTTAC 57.414 33.333 0.00 0.00 0.00 2.01
457 458 9.320295 ACAAATTCCCTTGGTCTAATCAATTTA 57.680 29.630 0.00 0.00 0.00 1.40
458 459 8.206126 ACAAATTCCCTTGGTCTAATCAATTT 57.794 30.769 0.00 0.00 0.00 1.82
459 460 7.797121 ACAAATTCCCTTGGTCTAATCAATT 57.203 32.000 0.00 0.00 0.00 2.32
460 461 7.797121 AACAAATTCCCTTGGTCTAATCAAT 57.203 32.000 0.00 0.00 0.00 2.57
461 462 7.288852 TCAAACAAATTCCCTTGGTCTAATCAA 59.711 33.333 0.00 0.00 0.00 2.57
462 463 6.780031 TCAAACAAATTCCCTTGGTCTAATCA 59.220 34.615 0.00 0.00 0.00 2.57
463 464 7.227049 TCAAACAAATTCCCTTGGTCTAATC 57.773 36.000 0.00 0.00 0.00 1.75
464 465 7.256296 CCTTCAAACAAATTCCCTTGGTCTAAT 60.256 37.037 0.00 0.00 0.00 1.73
465 466 6.041523 CCTTCAAACAAATTCCCTTGGTCTAA 59.958 38.462 0.00 0.00 0.00 2.10
466 467 5.538433 CCTTCAAACAAATTCCCTTGGTCTA 59.462 40.000 0.00 0.00 0.00 2.59
467 468 4.344968 CCTTCAAACAAATTCCCTTGGTCT 59.655 41.667 0.00 0.00 0.00 3.85
468 469 4.100963 ACCTTCAAACAAATTCCCTTGGTC 59.899 41.667 0.00 0.00 0.00 4.02
469 470 4.037222 ACCTTCAAACAAATTCCCTTGGT 58.963 39.130 0.00 0.00 0.00 3.67
470 471 4.687901 ACCTTCAAACAAATTCCCTTGG 57.312 40.909 0.00 0.00 0.00 3.61
471 472 6.112058 TGAAACCTTCAAACAAATTCCCTTG 58.888 36.000 0.00 0.00 36.59 3.61
472 473 6.306643 TGAAACCTTCAAACAAATTCCCTT 57.693 33.333 0.00 0.00 36.59 3.95
473 474 5.948742 TGAAACCTTCAAACAAATTCCCT 57.051 34.783 0.00 0.00 36.59 4.20
474 475 6.542005 ACAATGAAACCTTCAAACAAATTCCC 59.458 34.615 0.00 0.00 43.95 3.97
475 476 7.065683 ACACAATGAAACCTTCAAACAAATTCC 59.934 33.333 0.00 0.00 43.95 3.01
476 477 7.904461 CACACAATGAAACCTTCAAACAAATTC 59.096 33.333 0.00 0.00 43.95 2.17
477 478 7.605691 TCACACAATGAAACCTTCAAACAAATT 59.394 29.630 0.00 0.00 43.95 1.82
478 479 7.102346 TCACACAATGAAACCTTCAAACAAAT 58.898 30.769 0.00 0.00 43.95 2.32
479 480 6.459066 TCACACAATGAAACCTTCAAACAAA 58.541 32.000 0.00 0.00 43.95 2.83
480 481 6.030548 TCACACAATGAAACCTTCAAACAA 57.969 33.333 0.00 0.00 43.95 2.83
481 482 5.184864 ACTCACACAATGAAACCTTCAAACA 59.815 36.000 0.00 0.00 43.95 2.83
482 483 5.650543 ACTCACACAATGAAACCTTCAAAC 58.349 37.500 0.00 0.00 43.95 2.93
483 484 5.913137 ACTCACACAATGAAACCTTCAAA 57.087 34.783 0.00 0.00 43.95 2.69
484 485 5.913137 AACTCACACAATGAAACCTTCAA 57.087 34.783 0.00 0.00 43.95 2.69
485 486 6.119536 AGTAACTCACACAATGAAACCTTCA 58.880 36.000 0.00 0.00 45.01 3.02
486 487 6.619801 AGTAACTCACACAATGAAACCTTC 57.380 37.500 0.00 0.00 36.69 3.46
487 488 7.255139 GCTTAGTAACTCACACAATGAAACCTT 60.255 37.037 0.00 0.00 36.69 3.50
488 489 6.204882 GCTTAGTAACTCACACAATGAAACCT 59.795 38.462 0.00 0.00 36.69 3.50
489 490 6.204882 AGCTTAGTAACTCACACAATGAAACC 59.795 38.462 0.00 0.00 36.69 3.27
490 491 7.190920 AGCTTAGTAACTCACACAATGAAAC 57.809 36.000 0.00 0.00 36.69 2.78
539 540 9.223099 GGTGGTCAGCTAAAGTTACTATTAAAA 57.777 33.333 0.00 0.00 0.00 1.52
540 541 7.546667 CGGTGGTCAGCTAAAGTTACTATTAAA 59.453 37.037 0.00 0.00 0.00 1.52
541 542 7.037438 CGGTGGTCAGCTAAAGTTACTATTAA 58.963 38.462 0.00 0.00 0.00 1.40
542 543 6.567050 CGGTGGTCAGCTAAAGTTACTATTA 58.433 40.000 0.00 0.00 0.00 0.98
543 544 5.416947 CGGTGGTCAGCTAAAGTTACTATT 58.583 41.667 0.00 0.00 0.00 1.73
544 545 4.679905 GCGGTGGTCAGCTAAAGTTACTAT 60.680 45.833 0.00 0.00 0.00 2.12
545 546 3.367703 GCGGTGGTCAGCTAAAGTTACTA 60.368 47.826 0.00 0.00 0.00 1.82
546 547 2.612221 GCGGTGGTCAGCTAAAGTTACT 60.612 50.000 0.00 0.00 0.00 2.24
547 548 1.730612 GCGGTGGTCAGCTAAAGTTAC 59.269 52.381 0.00 0.00 0.00 2.50
548 549 1.345089 TGCGGTGGTCAGCTAAAGTTA 59.655 47.619 0.00 0.00 35.86 2.24
549 550 0.107831 TGCGGTGGTCAGCTAAAGTT 59.892 50.000 0.00 0.00 35.86 2.66
550 551 0.324943 ATGCGGTGGTCAGCTAAAGT 59.675 50.000 0.00 0.00 35.86 2.66
551 552 1.933853 GTATGCGGTGGTCAGCTAAAG 59.066 52.381 0.00 0.00 35.86 1.85
552 553 1.276705 TGTATGCGGTGGTCAGCTAAA 59.723 47.619 0.00 0.00 35.86 1.85
553 554 0.899019 TGTATGCGGTGGTCAGCTAA 59.101 50.000 0.00 0.00 35.86 3.09
554 555 0.459899 CTGTATGCGGTGGTCAGCTA 59.540 55.000 0.00 0.00 35.86 3.32
555 556 1.219124 CTGTATGCGGTGGTCAGCT 59.781 57.895 0.00 0.00 35.86 4.24
556 557 0.391130 TTCTGTATGCGGTGGTCAGC 60.391 55.000 0.00 0.00 35.44 4.26
557 558 1.935873 CATTCTGTATGCGGTGGTCAG 59.064 52.381 0.00 0.00 0.00 3.51
558 559 1.552792 TCATTCTGTATGCGGTGGTCA 59.447 47.619 0.00 0.00 34.06 4.02
559 560 2.309528 TCATTCTGTATGCGGTGGTC 57.690 50.000 0.00 0.00 34.06 4.02
560 561 2.779755 TTCATTCTGTATGCGGTGGT 57.220 45.000 0.00 0.00 34.06 4.16
561 562 4.353737 CATTTTCATTCTGTATGCGGTGG 58.646 43.478 0.00 0.00 34.06 4.61
562 563 4.096231 TCCATTTTCATTCTGTATGCGGTG 59.904 41.667 0.00 0.00 34.06 4.94
563 564 4.269183 TCCATTTTCATTCTGTATGCGGT 58.731 39.130 0.00 0.00 34.06 5.68
564 565 4.790766 GCTCCATTTTCATTCTGTATGCGG 60.791 45.833 0.00 0.00 34.06 5.69
565 566 4.036027 AGCTCCATTTTCATTCTGTATGCG 59.964 41.667 0.00 0.00 34.06 4.73
566 567 5.511234 AGCTCCATTTTCATTCTGTATGC 57.489 39.130 0.00 0.00 34.06 3.14
567 568 7.798596 ACTAGCTCCATTTTCATTCTGTATG 57.201 36.000 0.00 0.00 35.45 2.39
568 569 9.553064 CTAACTAGCTCCATTTTCATTCTGTAT 57.447 33.333 0.00 0.00 0.00 2.29
569 570 8.540388 ACTAACTAGCTCCATTTTCATTCTGTA 58.460 33.333 0.00 0.00 0.00 2.74
570 571 7.398024 ACTAACTAGCTCCATTTTCATTCTGT 58.602 34.615 0.00 0.00 0.00 3.41
571 572 7.856145 ACTAACTAGCTCCATTTTCATTCTG 57.144 36.000 0.00 0.00 0.00 3.02
572 573 7.713073 GCTACTAACTAGCTCCATTTTCATTCT 59.287 37.037 0.00 0.00 44.24 2.40
573 574 7.041712 GGCTACTAACTAGCTCCATTTTCATTC 60.042 40.741 0.00 0.00 46.53 2.67
574 575 6.768381 GGCTACTAACTAGCTCCATTTTCATT 59.232 38.462 0.00 0.00 46.53 2.57
575 576 6.100424 AGGCTACTAACTAGCTCCATTTTCAT 59.900 38.462 0.00 0.00 46.53 2.57
576 577 5.425539 AGGCTACTAACTAGCTCCATTTTCA 59.574 40.000 0.00 0.00 46.53 2.69
577 578 5.755861 CAGGCTACTAACTAGCTCCATTTTC 59.244 44.000 0.00 0.00 46.53 2.29
578 579 5.189934 ACAGGCTACTAACTAGCTCCATTTT 59.810 40.000 0.00 0.00 46.53 1.82
579 580 4.717280 ACAGGCTACTAACTAGCTCCATTT 59.283 41.667 0.00 0.00 46.53 2.32
580 581 4.290942 ACAGGCTACTAACTAGCTCCATT 58.709 43.478 0.00 0.00 46.53 3.16
581 582 3.917300 ACAGGCTACTAACTAGCTCCAT 58.083 45.455 0.00 0.00 46.53 3.41
582 583 3.383698 ACAGGCTACTAACTAGCTCCA 57.616 47.619 0.00 0.00 46.53 3.86
583 584 4.278919 CCTTACAGGCTACTAACTAGCTCC 59.721 50.000 0.00 0.00 46.53 4.70
584 585 5.441709 CCTTACAGGCTACTAACTAGCTC 57.558 47.826 0.00 0.00 46.53 4.09
598 599 4.897509 TCATCTCCATATGCCTTACAGG 57.102 45.455 0.00 0.00 38.80 4.00
599 600 7.180322 AGTATCATCTCCATATGCCTTACAG 57.820 40.000 0.00 0.00 0.00 2.74
600 601 8.844865 ATAGTATCATCTCCATATGCCTTACA 57.155 34.615 0.00 0.00 0.00 2.41
601 602 9.539825 CAATAGTATCATCTCCATATGCCTTAC 57.460 37.037 0.00 0.00 0.00 2.34
602 603 8.708378 CCAATAGTATCATCTCCATATGCCTTA 58.292 37.037 0.00 0.00 0.00 2.69
603 604 7.183475 ACCAATAGTATCATCTCCATATGCCTT 59.817 37.037 0.00 0.00 0.00 4.35
604 605 6.675746 ACCAATAGTATCATCTCCATATGCCT 59.324 38.462 0.00 0.00 0.00 4.75
605 606 6.893583 ACCAATAGTATCATCTCCATATGCC 58.106 40.000 0.00 0.00 0.00 4.40
606 607 8.798859 AAACCAATAGTATCATCTCCATATGC 57.201 34.615 0.00 0.00 0.00 3.14
638 639 9.529325 CTCTGTGTTCATAGAATAATACGGAAA 57.471 33.333 1.42 0.00 33.46 3.13
639 640 7.652105 GCTCTGTGTTCATAGAATAATACGGAA 59.348 37.037 1.42 0.00 33.46 4.30
640 641 7.145985 GCTCTGTGTTCATAGAATAATACGGA 58.854 38.462 1.42 0.00 33.01 4.69
641 642 6.923508 TGCTCTGTGTTCATAGAATAATACGG 59.076 38.462 1.42 0.00 0.00 4.02
642 643 7.930513 TGCTCTGTGTTCATAGAATAATACG 57.069 36.000 1.42 0.00 0.00 3.06
648 649 8.969260 TCATAATTGCTCTGTGTTCATAGAAT 57.031 30.769 1.42 0.00 0.00 2.40
649 650 8.969260 ATCATAATTGCTCTGTGTTCATAGAA 57.031 30.769 1.42 0.00 0.00 2.10
652 653 9.783081 ACATATCATAATTGCTCTGTGTTCATA 57.217 29.630 0.00 0.00 0.00 2.15
653 654 8.687292 ACATATCATAATTGCTCTGTGTTCAT 57.313 30.769 0.00 0.00 0.00 2.57
654 655 8.400186 CAACATATCATAATTGCTCTGTGTTCA 58.600 33.333 0.00 0.00 0.00 3.18
655 656 8.400947 ACAACATATCATAATTGCTCTGTGTTC 58.599 33.333 0.00 0.00 0.00 3.18
656 657 8.186163 CACAACATATCATAATTGCTCTGTGTT 58.814 33.333 0.00 0.00 0.00 3.32
657 658 7.553760 TCACAACATATCATAATTGCTCTGTGT 59.446 33.333 0.00 0.00 32.96 3.72
658 659 7.854422 GTCACAACATATCATAATTGCTCTGTG 59.146 37.037 0.00 0.00 0.00 3.66
659 660 7.012704 GGTCACAACATATCATAATTGCTCTGT 59.987 37.037 0.00 0.00 0.00 3.41
660 661 7.358066 GGTCACAACATATCATAATTGCTCTG 58.642 38.462 0.00 0.00 0.00 3.35
661 662 6.488006 GGGTCACAACATATCATAATTGCTCT 59.512 38.462 0.00 0.00 0.00 4.09
662 663 6.488006 AGGGTCACAACATATCATAATTGCTC 59.512 38.462 0.00 0.00 0.00 4.26
663 664 6.367983 AGGGTCACAACATATCATAATTGCT 58.632 36.000 0.00 0.00 0.00 3.91
664 665 6.639632 AGGGTCACAACATATCATAATTGC 57.360 37.500 0.00 0.00 0.00 3.56
665 666 8.685427 TCAAAGGGTCACAACATATCATAATTG 58.315 33.333 0.00 0.00 0.00 2.32
666 667 8.821686 TCAAAGGGTCACAACATATCATAATT 57.178 30.769 0.00 0.00 0.00 1.40
667 668 8.821686 TTCAAAGGGTCACAACATATCATAAT 57.178 30.769 0.00 0.00 0.00 1.28
668 669 8.821686 ATTCAAAGGGTCACAACATATCATAA 57.178 30.769 0.00 0.00 0.00 1.90
669 670 8.821686 AATTCAAAGGGTCACAACATATCATA 57.178 30.769 0.00 0.00 0.00 2.15
670 671 7.722949 AATTCAAAGGGTCACAACATATCAT 57.277 32.000 0.00 0.00 0.00 2.45
671 672 8.106462 TCTAATTCAAAGGGTCACAACATATCA 58.894 33.333 0.00 0.00 0.00 2.15
672 673 8.506168 TCTAATTCAAAGGGTCACAACATATC 57.494 34.615 0.00 0.00 0.00 1.63
673 674 8.877864 TTCTAATTCAAAGGGTCACAACATAT 57.122 30.769 0.00 0.00 0.00 1.78
674 675 8.877864 ATTCTAATTCAAAGGGTCACAACATA 57.122 30.769 0.00 0.00 0.00 2.29
675 676 7.781324 ATTCTAATTCAAAGGGTCACAACAT 57.219 32.000 0.00 0.00 0.00 2.71
676 677 7.595819 AATTCTAATTCAAAGGGTCACAACA 57.404 32.000 0.00 0.00 0.00 3.33
677 678 9.010029 TCTAATTCTAATTCAAAGGGTCACAAC 57.990 33.333 0.00 0.00 0.00 3.32
678 679 9.231297 CTCTAATTCTAATTCAAAGGGTCACAA 57.769 33.333 0.00 0.00 0.00 3.33
679 680 8.383175 ACTCTAATTCTAATTCAAAGGGTCACA 58.617 33.333 0.00 0.00 0.00 3.58
680 681 8.794335 ACTCTAATTCTAATTCAAAGGGTCAC 57.206 34.615 0.00 0.00 0.00 3.67
694 695 8.711170 CCCCAGGTGTAATTAACTCTAATTCTA 58.289 37.037 0.00 0.00 38.44 2.10
695 696 7.184022 ACCCCAGGTGTAATTAACTCTAATTCT 59.816 37.037 0.00 0.00 35.55 2.40
696 697 7.344134 ACCCCAGGTGTAATTAACTCTAATTC 58.656 38.462 0.00 0.00 35.55 2.17
697 698 7.280044 ACCCCAGGTGTAATTAACTCTAATT 57.720 36.000 0.00 0.00 36.77 1.40
698 699 6.903340 ACCCCAGGTGTAATTAACTCTAAT 57.097 37.500 0.00 0.00 32.98 1.73
934 942 6.387192 TTTGAAGGAGATTGGGATACAGAA 57.613 37.500 0.00 0.00 39.74 3.02
949 958 1.134401 CGCAGCTAGGGATTTGAAGGA 60.134 52.381 0.00 0.00 0.00 3.36
1061 1085 4.717629 CGTTGACAGAGCCGCCGA 62.718 66.667 0.00 0.00 0.00 5.54
1661 1743 5.784578 TTTTTCCCTACTTTTTCTCTGCC 57.215 39.130 0.00 0.00 0.00 4.85
1742 1825 6.215841 TCACACAAATCCCCTACTAACCAATA 59.784 38.462 0.00 0.00 0.00 1.90
2118 2259 5.994668 AGTGATGAGAGTTTCAGAAAGTTCC 59.005 40.000 4.66 1.47 39.68 3.62
2637 2839 1.344496 CCCAATCCCTCTCCTACCACT 60.344 57.143 0.00 0.00 0.00 4.00
2753 2955 1.592400 CGAGCCACTTCCGTCCACTA 61.592 60.000 0.00 0.00 0.00 2.74
2827 3059 3.316573 CTCTTCCCGCCTTCGCCTT 62.317 63.158 0.00 0.00 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.