Multiple sequence alignment - TraesCS4A01G165100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G165100 chr4A 100.000 3183 0 0 1 3183 385782526 385779344 0.000000e+00 5879.0
1 TraesCS4A01G165100 chr4A 92.918 946 65 2 1 946 620314374 620315317 0.000000e+00 1375.0
2 TraesCS4A01G165100 chr3D 87.965 1504 131 24 993 2450 30237081 30235582 0.000000e+00 1729.0
3 TraesCS4A01G165100 chr3D 94.136 938 47 3 1 938 101118257 101119186 0.000000e+00 1421.0
4 TraesCS4A01G165100 chr3B 87.434 1512 132 28 993 2461 51815490 51813994 0.000000e+00 1687.0
5 TraesCS4A01G165100 chr3B 88.094 1411 121 22 992 2360 52772037 52773442 0.000000e+00 1631.0
6 TraesCS4A01G165100 chr3B 94.286 35 2 0 2557 2591 741709838 741709804 2.000000e-03 54.7
7 TraesCS4A01G165100 chr3A 88.898 1270 107 14 993 2231 41992098 41990832 0.000000e+00 1533.0
8 TraesCS4A01G165100 chr1D 93.136 947 63 2 1 946 449723149 449724094 0.000000e+00 1387.0
9 TraesCS4A01G165100 chr1D 96.875 32 1 0 2557 2588 241243976 241244007 2.000000e-03 54.7
10 TraesCS4A01G165100 chr1D 94.286 35 2 0 2557 2591 315002143 315002109 2.000000e-03 54.7
11 TraesCS4A01G165100 chr1D 96.875 32 1 0 2557 2588 345709696 345709727 2.000000e-03 54.7
12 TraesCS4A01G165100 chr1D 96.875 32 1 0 2557 2588 404146347 404146316 2.000000e-03 54.7
13 TraesCS4A01G165100 chr1D 96.875 32 1 0 2557 2588 426175971 426175940 2.000000e-03 54.7
14 TraesCS4A01G165100 chr1D 96.875 32 1 0 2557 2588 454453519 454453550 2.000000e-03 54.7
15 TraesCS4A01G165100 chr1D 96.875 32 1 0 2557 2588 468550716 468550747 2.000000e-03 54.7
16 TraesCS4A01G165100 chr7D 92.940 949 59 4 1 949 160417570 160416630 0.000000e+00 1375.0
17 TraesCS4A01G165100 chr7D 100.000 31 0 0 952 982 235376444 235376414 1.230000e-04 58.4
18 TraesCS4A01G165100 chr5D 92.979 940 60 5 1 938 398211823 398210888 0.000000e+00 1365.0
19 TraesCS4A01G165100 chr5D 92.163 957 66 4 1 949 36839243 36838288 0.000000e+00 1343.0
20 TraesCS4A01G165100 chr5D 97.059 34 1 0 2557 2590 128572963 128572996 1.230000e-04 58.4
21 TraesCS4A01G165100 chr5D 100.000 30 0 0 2559 2588 209316988 209317017 4.440000e-04 56.5
22 TraesCS4A01G165100 chr2D 92.744 951 59 7 1 949 582517638 582516696 0.000000e+00 1365.0
23 TraesCS4A01G165100 chr2D 92.219 951 69 5 2 949 524179335 524178387 0.000000e+00 1341.0
24 TraesCS4A01G165100 chr2D 96.875 32 1 0 2557 2588 334082992 334083023 2.000000e-03 54.7
25 TraesCS4A01G165100 chr5A 92.389 946 68 3 1 946 137582416 137583357 0.000000e+00 1345.0
26 TraesCS4A01G165100 chr4B 91.100 809 49 5 941 1726 207124253 207123445 0.000000e+00 1074.0
27 TraesCS4A01G165100 chr4B 94.393 214 12 0 1711 1924 207118981 207118768 2.370000e-86 329.0
28 TraesCS4A01G165100 chr4B 88.571 175 10 2 2463 2637 207116060 207115896 1.500000e-48 204.0
29 TraesCS4A01G165100 chr4B 91.489 141 11 1 2691 2830 207115867 207115727 3.240000e-45 193.0
30 TraesCS4A01G165100 chr4D 91.615 644 37 4 1345 1972 164905028 164904386 0.000000e+00 874.0
31 TraesCS4A01G165100 chr4D 92.500 200 15 0 1974 2173 164888427 164888228 1.440000e-73 287.0
32 TraesCS4A01G165100 chr4D 100.000 36 0 0 1296 1331 164905060 164905025 2.050000e-07 67.6
33 TraesCS4A01G165100 chr2B 89.362 47 3 1 2557 2603 94092480 94092436 1.230000e-04 58.4
34 TraesCS4A01G165100 chr2B 96.875 32 1 0 2557 2588 545160180 545160211 2.000000e-03 54.7
35 TraesCS4A01G165100 chr7B 96.970 33 1 0 2557 2589 223176004 223176036 4.440000e-04 56.5
36 TraesCS4A01G165100 chr6A 96.970 33 1 0 2557 2589 585964259 585964291 4.440000e-04 56.5
37 TraesCS4A01G165100 chr1B 92.500 40 1 2 2557 2596 16452204 16452241 4.440000e-04 56.5
38 TraesCS4A01G165100 chrUn 96.875 32 1 0 2557 2588 29722122 29722091 2.000000e-03 54.7
39 TraesCS4A01G165100 chrUn 100.000 28 0 0 2557 2584 31521477 31521504 6.000000e-03 52.8
40 TraesCS4A01G165100 chr6D 96.774 31 1 0 2557 2587 1797297 1797267 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G165100 chr4A 385779344 385782526 3182 True 5879.0 5879 100.000000 1 3183 1 chr4A.!!$R1 3182
1 TraesCS4A01G165100 chr4A 620314374 620315317 943 False 1375.0 1375 92.918000 1 946 1 chr4A.!!$F1 945
2 TraesCS4A01G165100 chr3D 30235582 30237081 1499 True 1729.0 1729 87.965000 993 2450 1 chr3D.!!$R1 1457
3 TraesCS4A01G165100 chr3D 101118257 101119186 929 False 1421.0 1421 94.136000 1 938 1 chr3D.!!$F1 937
4 TraesCS4A01G165100 chr3B 51813994 51815490 1496 True 1687.0 1687 87.434000 993 2461 1 chr3B.!!$R1 1468
5 TraesCS4A01G165100 chr3B 52772037 52773442 1405 False 1631.0 1631 88.094000 992 2360 1 chr3B.!!$F1 1368
6 TraesCS4A01G165100 chr3A 41990832 41992098 1266 True 1533.0 1533 88.898000 993 2231 1 chr3A.!!$R1 1238
7 TraesCS4A01G165100 chr1D 449723149 449724094 945 False 1387.0 1387 93.136000 1 946 1 chr1D.!!$F3 945
8 TraesCS4A01G165100 chr7D 160416630 160417570 940 True 1375.0 1375 92.940000 1 949 1 chr7D.!!$R1 948
9 TraesCS4A01G165100 chr5D 398210888 398211823 935 True 1365.0 1365 92.979000 1 938 1 chr5D.!!$R2 937
10 TraesCS4A01G165100 chr5D 36838288 36839243 955 True 1343.0 1343 92.163000 1 949 1 chr5D.!!$R1 948
11 TraesCS4A01G165100 chr2D 582516696 582517638 942 True 1365.0 1365 92.744000 1 949 1 chr2D.!!$R2 948
12 TraesCS4A01G165100 chr2D 524178387 524179335 948 True 1341.0 1341 92.219000 2 949 1 chr2D.!!$R1 947
13 TraesCS4A01G165100 chr5A 137582416 137583357 941 False 1345.0 1345 92.389000 1 946 1 chr5A.!!$F1 945
14 TraesCS4A01G165100 chr4B 207123445 207124253 808 True 1074.0 1074 91.100000 941 1726 1 chr4B.!!$R1 785
15 TraesCS4A01G165100 chr4B 207115727 207118981 3254 True 242.0 329 91.484333 1711 2830 3 chr4B.!!$R2 1119
16 TraesCS4A01G165100 chr4D 164904386 164905060 674 True 470.8 874 95.807500 1296 1972 2 chr4D.!!$R2 676

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
498 520 0.029035 GTCGATGTCGGCGTCAGTAT 59.971 55.0 12.9 0.0 40.29 2.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2222 4254 1.080638 ACCTCAAATACCCCTTGGCA 58.919 50.0 0.0 0.0 33.59 4.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 1.192146 TCTTGGACAGGGGTTCCTCG 61.192 60.000 0.00 0.00 42.67 4.63
58 59 1.867363 ATAGCTCGTTTCACCCTCCT 58.133 50.000 0.00 0.00 0.00 3.69
97 98 2.006805 TTGTTGAACATGCCCATGGA 57.993 45.000 15.22 0.00 42.91 3.41
153 154 5.079689 TCACGGTTGTTCTATGCTATCAA 57.920 39.130 0.00 0.00 0.00 2.57
426 427 4.873129 CGGTAGCGGCATCAGCGT 62.873 66.667 6.39 0.00 43.41 5.07
498 520 0.029035 GTCGATGTCGGCGTCAGTAT 59.971 55.000 12.90 0.00 40.29 2.12
512 534 2.297315 GTCAGTATCATCATCGAGGCCA 59.703 50.000 5.01 0.00 0.00 5.36
532 554 2.143876 ACCTGCAAACCTTGACTGTT 57.856 45.000 0.00 0.00 0.00 3.16
534 556 2.023673 CCTGCAAACCTTGACTGTTCA 58.976 47.619 0.00 0.00 0.00 3.18
600 622 1.618343 TCTCGTCTGCATCTTGGTCAA 59.382 47.619 0.00 0.00 0.00 3.18
611 633 0.593128 CTTGGTCAAAAGGCTCGGTG 59.407 55.000 0.00 0.00 0.00 4.94
769 795 4.351874 TGCCTACTTTCTAGCACAAGTT 57.648 40.909 7.00 0.00 34.92 2.66
825 851 6.719370 ACCTTTGCTAAAAAGTGGACATATCA 59.281 34.615 0.00 0.00 0.00 2.15
954 981 9.859427 CATGTCCAAAACATCACAAGTTATAAT 57.141 29.630 0.00 0.00 45.78 1.28
977 1004 3.952967 AGTGAACGGAGGGAGTATTAGAC 59.047 47.826 0.00 0.00 0.00 2.59
982 1009 1.614413 GGAGGGAGTATTAGACAGGCG 59.386 57.143 0.00 0.00 0.00 5.52
1008 1039 6.747280 GTCACAATCAACACTATATGCCAAAC 59.253 38.462 0.00 0.00 0.00 2.93
1023 1054 3.823873 TGCCAAACGTGATTATCTTTGGT 59.176 39.130 19.03 1.07 43.14 3.67
1096 1132 2.674796 ACCAGGTATCGACAAGCTTC 57.325 50.000 0.00 0.00 0.00 3.86
1108 1144 3.305403 CGACAAGCTTCTGACCTCAACTA 60.305 47.826 0.00 0.00 0.00 2.24
1118 1154 6.139679 TCTGACCTCAACTATTGGGAAATT 57.860 37.500 0.00 0.00 30.85 1.82
1204 1241 5.586243 CAGAAGGGTTATGTTGTGTGGATAG 59.414 44.000 0.00 0.00 0.00 2.08
1331 1373 0.167470 GCACACTAGCATGCACACTG 59.833 55.000 21.98 11.42 41.65 3.66
1336 1378 0.036105 CTAGCATGCACACTGGGTCA 60.036 55.000 21.98 0.00 0.00 4.02
1411 1457 1.064825 ATGGGTTGAACCGAGACCTT 58.935 50.000 8.47 0.00 39.83 3.50
1418 1464 3.269538 TGAACCGAGACCTTTGTTTCA 57.730 42.857 0.00 0.00 0.00 2.69
1431 1477 4.758688 CTTTGTTTCAAAGCAAAGGACCT 58.241 39.130 18.73 0.00 46.72 3.85
1646 1694 3.581755 AGCGCTTGTCGTAAATTACTGA 58.418 40.909 2.64 0.00 41.07 3.41
1740 1807 7.661536 ACCAGCATAGAGAAGTGTATTTCTA 57.338 36.000 0.00 0.00 37.53 2.10
1816 1883 1.894466 TGTACAAGCTTACCCGTGCTA 59.106 47.619 0.00 0.00 38.75 3.49
1824 1891 4.332828 AGCTTACCCGTGCTAGAAAAATT 58.667 39.130 0.00 0.00 37.81 1.82
1831 1898 5.048294 ACCCGTGCTAGAAAAATTAAAGGTG 60.048 40.000 0.00 0.00 0.00 4.00
1848 1915 4.236527 AGGTGAAAGAACCAACAGACTT 57.763 40.909 0.00 0.00 43.20 3.01
1849 1916 4.200092 AGGTGAAAGAACCAACAGACTTC 58.800 43.478 0.00 0.00 43.20 3.01
1852 1919 3.202151 TGAAAGAACCAACAGACTTCCCT 59.798 43.478 0.00 0.00 0.00 4.20
1882 1951 9.959749 TTCTTATGTTTCGCAAATCTTACTTTT 57.040 25.926 0.00 0.00 0.00 2.27
1894 1964 9.353999 GCAAATCTTACTTTTTAAATCATCCGT 57.646 29.630 0.00 0.00 0.00 4.69
1934 3048 4.503714 TGATCCTTATGAACCACCTTCC 57.496 45.455 0.00 0.00 0.00 3.46
1940 3054 2.879103 ATGAACCACCTTCCGATTGT 57.121 45.000 0.00 0.00 0.00 2.71
1950 3064 1.927174 CTTCCGATTGTGAGGTTAGCG 59.073 52.381 0.00 0.00 0.00 4.26
1951 3065 0.892755 TCCGATTGTGAGGTTAGCGT 59.107 50.000 0.00 0.00 0.00 5.07
2019 3563 9.032420 GTATTATTGCCAGTTACTCTGTAAGAC 57.968 37.037 0.00 0.00 38.67 3.01
2030 3578 5.373981 ACTCTGTAAGACGTTCCTAGTTG 57.626 43.478 0.00 0.00 38.67 3.16
2031 3579 4.826183 ACTCTGTAAGACGTTCCTAGTTGT 59.174 41.667 0.00 0.00 38.67 3.32
2034 3582 6.849502 TCTGTAAGACGTTCCTAGTTGTATG 58.150 40.000 0.00 0.00 38.67 2.39
2049 3597 9.436957 CCTAGTTGTATGATGATGGGTATTAAC 57.563 37.037 0.00 0.00 0.00 2.01
2072 3620 5.185828 ACTTCATTGATTGAGCCCTTTAACC 59.814 40.000 0.00 0.00 35.27 2.85
2156 4021 5.814188 GCTGATCAAGTTGTGTCATATCTCA 59.186 40.000 12.01 0.00 0.00 3.27
2166 4197 6.198650 TGTGTCATATCTCAAAGCAAATGG 57.801 37.500 0.00 0.00 0.00 3.16
2205 4236 5.581085 AGAGACGTATGCTATGGACAAAAAC 59.419 40.000 0.00 0.00 0.00 2.43
2211 4242 6.688385 CGTATGCTATGGACAAAAACATTCTG 59.312 38.462 0.00 0.00 0.00 3.02
2222 4254 7.445096 GGACAAAAACATTCTGGAAATTGGATT 59.555 33.333 0.00 0.00 0.00 3.01
2251 4291 8.269317 CAAGGGGTATTTGAGGTAGTGTTTATA 58.731 37.037 0.00 0.00 0.00 0.98
2281 4321 5.713792 AGAGTGATGATAGTATGGGAACG 57.286 43.478 0.00 0.00 0.00 3.95
2293 4337 9.871238 GATAGTATGGGAACGTATTGACATAAT 57.129 33.333 0.00 0.00 33.58 1.28
2302 4346 9.135843 GGAACGTATTGACATAATGATCGAATA 57.864 33.333 0.00 0.00 0.00 1.75
2416 4685 7.440505 ACCCCACCTAAATTTTGTAAAGTTT 57.559 32.000 0.00 0.00 33.32 2.66
2444 4713 8.911247 AACACACACAAGAAAAACTTTCTATC 57.089 30.769 2.22 0.00 36.61 2.08
2490 4808 7.668886 AGTGGATTCTTATCATTTGATCATCCC 59.331 37.037 0.00 0.00 36.05 3.85
2542 4860 5.636903 ATGTGCTCCATATTTGGTACTCT 57.363 39.130 1.86 0.00 44.06 3.24
2547 4865 4.345257 GCTCCATATTTGGTACTCTCTCCA 59.655 45.833 1.86 0.00 44.06 3.86
2548 4866 5.012561 GCTCCATATTTGGTACTCTCTCCAT 59.987 44.000 1.86 0.00 44.06 3.41
2549 4867 6.211584 GCTCCATATTTGGTACTCTCTCCATA 59.788 42.308 1.86 0.00 44.06 2.74
2550 4868 7.256332 GCTCCATATTTGGTACTCTCTCCATAA 60.256 40.741 1.86 0.00 44.06 1.90
2551 4869 8.561536 TCCATATTTGGTACTCTCTCCATAAA 57.438 34.615 1.86 0.00 44.06 1.40
2552 4870 8.651389 TCCATATTTGGTACTCTCTCCATAAAG 58.349 37.037 1.86 0.00 44.06 1.85
2553 4871 8.651389 CCATATTTGGTACTCTCTCCATAAAGA 58.349 37.037 0.00 0.00 38.30 2.52
2586 4904 8.196378 AGAAATATAAGAGCGTTTAGATCCCT 57.804 34.615 0.00 0.00 35.47 4.20
2611 4929 9.727859 CTAGTACCTAGCAGTGATTTCTATAGA 57.272 37.037 0.00 0.00 0.00 1.98
2617 4935 7.647318 CCTAGCAGTGATTTCTATAGATATGCG 59.353 40.741 10.06 0.00 0.00 4.73
2637 4955 3.316308 GCGCATGAGGATACCAAGAATTT 59.684 43.478 0.30 0.00 37.17 1.82
2638 4956 4.202050 GCGCATGAGGATACCAAGAATTTT 60.202 41.667 0.30 0.00 37.17 1.82
2641 4959 6.238842 CGCATGAGGATACCAAGAATTTTCAT 60.239 38.462 0.00 0.00 37.17 2.57
2642 4960 7.144000 GCATGAGGATACCAAGAATTTTCATC 58.856 38.462 0.00 0.00 37.17 2.92
2645 4963 5.192927 AGGATACCAAGAATTTTCATCGCA 58.807 37.500 0.00 0.00 37.17 5.10
2646 4964 5.829924 AGGATACCAAGAATTTTCATCGCAT 59.170 36.000 0.00 0.00 37.17 4.73
2649 4967 8.134895 GGATACCAAGAATTTTCATCGCATTTA 58.865 33.333 0.00 0.00 0.00 1.40
2650 4968 8.856490 ATACCAAGAATTTTCATCGCATTTAC 57.144 30.769 0.00 0.00 0.00 2.01
2651 4969 6.924111 ACCAAGAATTTTCATCGCATTTACT 58.076 32.000 0.00 0.00 0.00 2.24
2652 4970 7.029563 ACCAAGAATTTTCATCGCATTTACTC 58.970 34.615 0.00 0.00 0.00 2.59
2653 4971 7.028962 CCAAGAATTTTCATCGCATTTACTCA 58.971 34.615 0.00 0.00 0.00 3.41
2654 4972 7.541783 CCAAGAATTTTCATCGCATTTACTCAA 59.458 33.333 0.00 0.00 0.00 3.02
2655 4973 8.368126 CAAGAATTTTCATCGCATTTACTCAAC 58.632 33.333 0.00 0.00 0.00 3.18
2656 4974 7.820648 AGAATTTTCATCGCATTTACTCAACT 58.179 30.769 0.00 0.00 0.00 3.16
2657 4975 8.299570 AGAATTTTCATCGCATTTACTCAACTT 58.700 29.630 0.00 0.00 0.00 2.66
2658 4976 8.452989 AATTTTCATCGCATTTACTCAACTTC 57.547 30.769 0.00 0.00 0.00 3.01
2659 4977 6.801539 TTTCATCGCATTTACTCAACTTCT 57.198 33.333 0.00 0.00 0.00 2.85
2661 4979 8.492673 TTTCATCGCATTTACTCAACTTCTAT 57.507 30.769 0.00 0.00 0.00 1.98
2665 4983 9.416794 CATCGCATTTACTCAACTTCTATAGAT 57.583 33.333 2.58 0.00 0.00 1.98
2671 4989 8.744008 TTTACTCAACTTCTATAGATATGCGC 57.256 34.615 2.58 0.00 0.00 6.09
2672 4990 6.332735 ACTCAACTTCTATAGATATGCGCA 57.667 37.500 14.96 14.96 0.00 6.09
2673 4991 6.929625 ACTCAACTTCTATAGATATGCGCAT 58.070 36.000 28.23 28.23 0.00 4.73
2674 4992 6.810676 ACTCAACTTCTATAGATATGCGCATG 59.189 38.462 32.48 14.03 0.00 4.06
2675 4993 6.924111 TCAACTTCTATAGATATGCGCATGA 58.076 36.000 32.48 16.24 0.00 3.07
2676 4994 7.031975 TCAACTTCTATAGATATGCGCATGAG 58.968 38.462 32.48 17.80 0.00 2.90
2677 4995 5.900425 ACTTCTATAGATATGCGCATGAGG 58.100 41.667 32.48 20.21 0.00 3.86
2678 4996 5.654209 ACTTCTATAGATATGCGCATGAGGA 59.346 40.000 32.48 13.46 0.00 3.71
2679 4997 6.323482 ACTTCTATAGATATGCGCATGAGGAT 59.677 38.462 32.48 18.00 0.00 3.24
2680 4998 6.324561 TCTATAGATATGCGCATGAGGATC 57.675 41.667 32.48 24.83 0.00 3.36
2681 4999 6.067350 TCTATAGATATGCGCATGAGGATCT 58.933 40.000 32.48 29.54 34.92 2.75
2682 5000 3.248495 AGATATGCGCATGAGGATCTG 57.752 47.619 32.48 0.00 34.92 2.90
2683 5001 1.664659 GATATGCGCATGAGGATCTGC 59.335 52.381 32.48 2.90 36.40 4.26
2684 5002 0.393820 TATGCGCATGAGGATCTGCA 59.606 50.000 32.48 5.53 38.56 4.41
2685 5003 0.250770 ATGCGCATGAGGATCTGCAT 60.251 50.000 24.69 0.00 38.56 3.96
2686 5004 0.883370 TGCGCATGAGGATCTGCATC 60.883 55.000 5.66 0.00 38.56 3.91
2687 5005 0.603172 GCGCATGAGGATCTGCATCT 60.603 55.000 0.30 0.00 38.56 2.90
2688 5006 1.149148 CGCATGAGGATCTGCATCTG 58.851 55.000 0.00 0.00 38.56 2.90
2689 5007 0.875728 GCATGAGGATCTGCATCTGC 59.124 55.000 0.00 0.00 38.53 4.26
2707 5025 7.986889 TGCATCTGCAAACTGTAGATTAAGATA 59.013 33.333 1.61 0.00 45.45 1.98
2750 5068 2.044793 AGGATCTTTGAGGGACCACA 57.955 50.000 0.00 0.00 0.00 4.17
2755 5073 3.254093 TCTTTGAGGGACCACAGTCTA 57.746 47.619 0.00 0.00 43.05 2.59
2768 5086 7.711339 GGGACCACAGTCTACTTGAAATATTAG 59.289 40.741 0.00 0.00 43.05 1.73
2771 5089 8.041323 ACCACAGTCTACTTGAAATATTAGTGG 58.959 37.037 0.00 0.00 44.21 4.00
2801 5119 6.205298 TCTATCATATGGAGATACCTTGGGG 58.795 44.000 2.13 0.00 39.86 4.96
2807 5125 1.349357 GGAGATACCTTGGGGATGAGC 59.651 57.143 0.00 0.00 36.25 4.26
2813 5132 1.751927 CTTGGGGATGAGCAGCACC 60.752 63.158 0.00 0.00 41.61 5.01
2817 5136 2.202987 GGATGAGCAGCACCGGAG 60.203 66.667 9.46 0.00 0.00 4.63
2830 5149 5.679638 GCAGCACCGGAGAAAATAATTTCAT 60.680 40.000 9.46 0.00 46.03 2.57
2831 5150 5.973565 CAGCACCGGAGAAAATAATTTCATC 59.026 40.000 9.46 1.32 46.03 2.92
2832 5151 5.888161 AGCACCGGAGAAAATAATTTCATCT 59.112 36.000 9.46 0.00 46.03 2.90
2833 5152 6.378280 AGCACCGGAGAAAATAATTTCATCTT 59.622 34.615 9.46 0.00 46.03 2.40
2834 5153 6.693113 GCACCGGAGAAAATAATTTCATCTTC 59.307 38.462 9.46 0.00 46.03 2.87
2835 5154 7.415653 GCACCGGAGAAAATAATTTCATCTTCT 60.416 37.037 9.46 0.00 46.03 2.85
2836 5155 7.912250 CACCGGAGAAAATAATTTCATCTTCTG 59.088 37.037 9.46 0.29 46.03 3.02
2837 5156 6.914757 CCGGAGAAAATAATTTCATCTTCTGC 59.085 38.462 0.00 0.00 46.03 4.26
2838 5157 6.914757 CGGAGAAAATAATTTCATCTTCTGCC 59.085 38.462 6.07 0.00 46.03 4.85
2839 5158 7.201767 CGGAGAAAATAATTTCATCTTCTGCCT 60.202 37.037 6.07 0.00 46.03 4.75
2840 5159 8.473219 GGAGAAAATAATTTCATCTTCTGCCTT 58.527 33.333 6.07 0.00 46.03 4.35
2841 5160 9.866798 GAGAAAATAATTTCATCTTCTGCCTTT 57.133 29.630 6.07 0.00 46.03 3.11
2842 5161 9.649167 AGAAAATAATTTCATCTTCTGCCTTTG 57.351 29.630 6.07 0.00 46.03 2.77
2843 5162 9.643693 GAAAATAATTTCATCTTCTGCCTTTGA 57.356 29.630 0.00 0.00 43.62 2.69
2844 5163 9.649167 AAAATAATTTCATCTTCTGCCTTTGAG 57.351 29.630 0.00 0.00 0.00 3.02
2845 5164 7.951347 ATAATTTCATCTTCTGCCTTTGAGT 57.049 32.000 0.00 0.00 0.00 3.41
2846 5165 6.661304 AATTTCATCTTCTGCCTTTGAGTT 57.339 33.333 0.00 0.00 0.00 3.01
2847 5166 5.443185 TTTCATCTTCTGCCTTTGAGTTG 57.557 39.130 0.00 0.00 0.00 3.16
2848 5167 3.415212 TCATCTTCTGCCTTTGAGTTGG 58.585 45.455 0.00 0.00 0.00 3.77
2849 5168 3.072915 TCATCTTCTGCCTTTGAGTTGGA 59.927 43.478 0.00 0.00 0.00 3.53
2850 5169 3.576078 TCTTCTGCCTTTGAGTTGGAA 57.424 42.857 0.00 0.00 0.00 3.53
2851 5170 4.104383 TCTTCTGCCTTTGAGTTGGAAT 57.896 40.909 0.00 0.00 0.00 3.01
2852 5171 4.473444 TCTTCTGCCTTTGAGTTGGAATT 58.527 39.130 0.00 0.00 0.00 2.17
2853 5172 5.630121 TCTTCTGCCTTTGAGTTGGAATTA 58.370 37.500 0.00 0.00 0.00 1.40
2854 5173 6.248433 TCTTCTGCCTTTGAGTTGGAATTAT 58.752 36.000 0.00 0.00 0.00 1.28
2855 5174 7.402054 TCTTCTGCCTTTGAGTTGGAATTATA 58.598 34.615 0.00 0.00 0.00 0.98
2856 5175 7.554118 TCTTCTGCCTTTGAGTTGGAATTATAG 59.446 37.037 0.00 0.00 0.00 1.31
2857 5176 6.122277 TCTGCCTTTGAGTTGGAATTATAGG 58.878 40.000 0.00 0.00 0.00 2.57
2858 5177 6.069673 TCTGCCTTTGAGTTGGAATTATAGGA 60.070 38.462 0.00 0.00 0.00 2.94
2859 5178 6.489603 TGCCTTTGAGTTGGAATTATAGGAA 58.510 36.000 0.00 0.00 0.00 3.36
2860 5179 6.951198 TGCCTTTGAGTTGGAATTATAGGAAA 59.049 34.615 0.00 0.00 0.00 3.13
2861 5180 7.093945 TGCCTTTGAGTTGGAATTATAGGAAAC 60.094 37.037 0.00 0.00 0.00 2.78
2862 5181 7.093945 GCCTTTGAGTTGGAATTATAGGAAACA 60.094 37.037 0.00 0.00 0.00 2.83
2863 5182 8.971073 CCTTTGAGTTGGAATTATAGGAAACAT 58.029 33.333 0.00 0.00 0.00 2.71
2865 5184 8.519799 TTGAGTTGGAATTATAGGAAACATCC 57.480 34.615 0.00 0.00 0.00 3.51
2866 5185 7.638444 TGAGTTGGAATTATAGGAAACATCCA 58.362 34.615 0.00 0.00 33.88 3.41
2867 5186 8.281531 TGAGTTGGAATTATAGGAAACATCCAT 58.718 33.333 0.00 0.00 35.57 3.41
2868 5187 9.136323 GAGTTGGAATTATAGGAAACATCCATT 57.864 33.333 0.00 0.00 35.57 3.16
2869 5188 9.492730 AGTTGGAATTATAGGAAACATCCATTT 57.507 29.630 0.00 0.00 35.57 2.32
2870 5189 9.533253 GTTGGAATTATAGGAAACATCCATTTG 57.467 33.333 0.00 0.00 35.57 2.32
2871 5190 7.725251 TGGAATTATAGGAAACATCCATTTGC 58.275 34.615 0.00 0.00 30.90 3.68
2872 5191 7.154656 GGAATTATAGGAAACATCCATTTGCC 58.845 38.462 0.00 0.00 30.71 4.52
2873 5192 7.201992 GGAATTATAGGAAACATCCATTTGCCA 60.202 37.037 0.00 0.00 30.71 4.92
2874 5193 7.860649 ATTATAGGAAACATCCATTTGCCAT 57.139 32.000 0.00 0.00 30.71 4.40
2875 5194 8.954834 ATTATAGGAAACATCCATTTGCCATA 57.045 30.769 0.00 0.00 30.71 2.74
2876 5195 8.954834 TTATAGGAAACATCCATTTGCCATAT 57.045 30.769 0.00 0.00 30.71 1.78
2877 5196 7.860649 ATAGGAAACATCCATTTGCCATATT 57.139 32.000 0.00 0.00 30.71 1.28
2878 5197 6.564557 AGGAAACATCCATTTGCCATATTT 57.435 33.333 0.00 0.00 30.71 1.40
2879 5198 6.585416 AGGAAACATCCATTTGCCATATTTC 58.415 36.000 0.00 0.00 30.71 2.17
2880 5199 6.384886 AGGAAACATCCATTTGCCATATTTCT 59.615 34.615 0.00 0.00 30.71 2.52
2881 5200 6.480981 GGAAACATCCATTTGCCATATTTCTG 59.519 38.462 0.00 0.00 0.00 3.02
2882 5201 5.540400 ACATCCATTTGCCATATTTCTGG 57.460 39.130 0.00 0.00 39.45 3.86
2883 5202 5.210430 ACATCCATTTGCCATATTTCTGGA 58.790 37.500 0.00 0.00 38.69 3.86
2884 5203 5.662208 ACATCCATTTGCCATATTTCTGGAA 59.338 36.000 0.00 0.00 38.69 3.53
2885 5204 5.857471 TCCATTTGCCATATTTCTGGAAG 57.143 39.130 0.00 0.00 38.69 3.46
2886 5205 5.517924 TCCATTTGCCATATTTCTGGAAGA 58.482 37.500 0.00 0.00 44.68 2.87
2887 5206 6.138263 TCCATTTGCCATATTTCTGGAAGAT 58.862 36.000 0.00 0.00 46.36 2.40
2888 5207 6.041182 TCCATTTGCCATATTTCTGGAAGATG 59.959 38.462 0.00 0.00 46.36 2.90
2895 5214 6.010294 CATATTTCTGGAAGATGGATGTGC 57.990 41.667 0.00 0.00 46.36 4.57
2896 5215 3.438216 TTTCTGGAAGATGGATGTGCA 57.562 42.857 0.00 0.00 46.36 4.57
2897 5216 2.408271 TCTGGAAGATGGATGTGCAC 57.592 50.000 10.75 10.75 38.67 4.57
2898 5217 1.911357 TCTGGAAGATGGATGTGCACT 59.089 47.619 19.41 3.19 38.67 4.40
2899 5218 2.014857 CTGGAAGATGGATGTGCACTG 58.985 52.381 19.41 0.00 34.07 3.66
2900 5219 1.629861 TGGAAGATGGATGTGCACTGA 59.370 47.619 19.41 0.00 0.00 3.41
2901 5220 2.012673 GGAAGATGGATGTGCACTGAC 58.987 52.381 19.41 8.28 0.00 3.51
2902 5221 2.012673 GAAGATGGATGTGCACTGACC 58.987 52.381 19.41 17.59 0.00 4.02
2903 5222 0.986527 AGATGGATGTGCACTGACCA 59.013 50.000 23.85 23.85 35.09 4.02
2904 5223 1.562942 AGATGGATGTGCACTGACCAT 59.437 47.619 28.64 28.64 42.90 3.55
2905 5224 1.674441 GATGGATGTGCACTGACCATG 59.326 52.381 31.24 0.00 40.74 3.66
2906 5225 0.691904 TGGATGTGCACTGACCATGA 59.308 50.000 19.41 0.00 0.00 3.07
2907 5226 1.073603 TGGATGTGCACTGACCATGAA 59.926 47.619 19.41 0.00 0.00 2.57
2908 5227 1.470098 GGATGTGCACTGACCATGAAC 59.530 52.381 19.41 0.00 0.00 3.18
2909 5228 2.153645 GATGTGCACTGACCATGAACA 58.846 47.619 19.41 0.00 39.98 3.18
2910 5229 2.049888 TGTGCACTGACCATGAACAA 57.950 45.000 19.41 0.00 32.39 2.83
2911 5230 1.948834 TGTGCACTGACCATGAACAAG 59.051 47.619 19.41 0.00 32.39 3.16
2912 5231 1.267806 GTGCACTGACCATGAACAAGG 59.732 52.381 10.32 0.00 0.00 3.61
2913 5232 1.142667 TGCACTGACCATGAACAAGGA 59.857 47.619 3.07 0.00 0.00 3.36
2914 5233 2.224843 TGCACTGACCATGAACAAGGAT 60.225 45.455 3.07 0.00 0.00 3.24
2915 5234 2.163010 GCACTGACCATGAACAAGGATG 59.837 50.000 3.07 0.00 0.00 3.51
2916 5235 2.163010 CACTGACCATGAACAAGGATGC 59.837 50.000 3.07 0.00 0.00 3.91
2917 5236 2.224843 ACTGACCATGAACAAGGATGCA 60.225 45.455 3.07 0.00 0.00 3.96
2918 5237 3.021695 CTGACCATGAACAAGGATGCAT 58.978 45.455 0.00 0.00 0.00 3.96
2919 5238 2.756207 TGACCATGAACAAGGATGCATG 59.244 45.455 2.46 0.00 38.22 4.06
2920 5239 1.479323 ACCATGAACAAGGATGCATGC 59.521 47.619 11.82 11.82 37.41 4.06
2921 5240 1.478916 CCATGAACAAGGATGCATGCA 59.521 47.619 25.04 25.04 37.41 3.96
2922 5241 2.093921 CCATGAACAAGGATGCATGCAA 60.094 45.455 26.68 8.49 37.41 4.08
2923 5242 3.591023 CATGAACAAGGATGCATGCAAA 58.409 40.909 26.68 1.26 32.73 3.68
2924 5243 3.029320 TGAACAAGGATGCATGCAAAC 57.971 42.857 26.68 19.90 0.00 2.93
2925 5244 2.629137 TGAACAAGGATGCATGCAAACT 59.371 40.909 26.68 21.88 0.00 2.66
2926 5245 3.069872 TGAACAAGGATGCATGCAAACTT 59.930 39.130 26.68 26.04 0.00 2.66
2927 5246 3.308438 ACAAGGATGCATGCAAACTTC 57.692 42.857 27.44 19.84 0.00 3.01
2928 5247 2.895404 ACAAGGATGCATGCAAACTTCT 59.105 40.909 27.44 18.50 0.00 2.85
2929 5248 3.322828 ACAAGGATGCATGCAAACTTCTT 59.677 39.130 27.44 18.73 0.00 2.52
2930 5249 4.202284 ACAAGGATGCATGCAAACTTCTTT 60.202 37.500 27.44 19.34 0.00 2.52
2931 5250 4.612264 AGGATGCATGCAAACTTCTTTT 57.388 36.364 26.68 4.06 0.00 2.27
2932 5251 5.726980 AGGATGCATGCAAACTTCTTTTA 57.273 34.783 26.68 0.00 0.00 1.52
2933 5252 5.717119 AGGATGCATGCAAACTTCTTTTAG 58.283 37.500 26.68 0.00 0.00 1.85
2934 5253 4.866486 GGATGCATGCAAACTTCTTTTAGG 59.134 41.667 26.68 0.00 0.00 2.69
2935 5254 5.336690 GGATGCATGCAAACTTCTTTTAGGA 60.337 40.000 26.68 0.00 0.00 2.94
2936 5255 5.726980 TGCATGCAAACTTCTTTTAGGAT 57.273 34.783 20.30 0.00 0.00 3.24
2937 5256 6.100404 TGCATGCAAACTTCTTTTAGGATT 57.900 33.333 20.30 0.00 0.00 3.01
2938 5257 6.158598 TGCATGCAAACTTCTTTTAGGATTC 58.841 36.000 20.30 0.00 0.00 2.52
2939 5258 6.158598 GCATGCAAACTTCTTTTAGGATTCA 58.841 36.000 14.21 0.00 0.00 2.57
2940 5259 6.646240 GCATGCAAACTTCTTTTAGGATTCAA 59.354 34.615 14.21 0.00 0.00 2.69
2941 5260 7.359514 GCATGCAAACTTCTTTTAGGATTCAAC 60.360 37.037 14.21 0.00 0.00 3.18
2942 5261 7.346751 TGCAAACTTCTTTTAGGATTCAACT 57.653 32.000 0.00 0.00 0.00 3.16
2943 5262 7.781056 TGCAAACTTCTTTTAGGATTCAACTT 58.219 30.769 0.00 0.00 0.00 2.66
2944 5263 8.257306 TGCAAACTTCTTTTAGGATTCAACTTT 58.743 29.630 0.00 0.00 0.00 2.66
2945 5264 9.744468 GCAAACTTCTTTTAGGATTCAACTTTA 57.256 29.630 0.00 0.00 0.00 1.85
2961 5280 7.401484 TCAACTTTAAATTTTTCACCATCGC 57.599 32.000 0.00 0.00 0.00 4.58
2962 5281 7.206687 TCAACTTTAAATTTTTCACCATCGCT 58.793 30.769 0.00 0.00 0.00 4.93
2963 5282 7.708752 TCAACTTTAAATTTTTCACCATCGCTT 59.291 29.630 0.00 0.00 0.00 4.68
2964 5283 7.406799 ACTTTAAATTTTTCACCATCGCTTG 57.593 32.000 0.00 0.00 0.00 4.01
2973 5292 3.853104 CCATCGCTTGGGTCAGTAA 57.147 52.632 0.00 0.00 42.33 2.24
2974 5293 2.107950 CCATCGCTTGGGTCAGTAAA 57.892 50.000 0.00 0.00 42.33 2.01
2975 5294 2.432444 CCATCGCTTGGGTCAGTAAAA 58.568 47.619 0.00 0.00 42.33 1.52
2976 5295 3.016736 CCATCGCTTGGGTCAGTAAAAT 58.983 45.455 0.00 0.00 42.33 1.82
2977 5296 3.065371 CCATCGCTTGGGTCAGTAAAATC 59.935 47.826 0.00 0.00 42.33 2.17
2978 5297 2.706890 TCGCTTGGGTCAGTAAAATCC 58.293 47.619 0.00 0.00 0.00 3.01
2979 5298 1.396996 CGCTTGGGTCAGTAAAATCCG 59.603 52.381 0.00 0.00 0.00 4.18
2980 5299 1.743394 GCTTGGGTCAGTAAAATCCGG 59.257 52.381 0.00 0.00 0.00 5.14
2981 5300 1.743394 CTTGGGTCAGTAAAATCCGGC 59.257 52.381 0.00 0.00 0.00 6.13
2982 5301 0.693622 TGGGTCAGTAAAATCCGGCA 59.306 50.000 0.00 0.00 0.00 5.69
2983 5302 1.074084 TGGGTCAGTAAAATCCGGCAA 59.926 47.619 0.00 0.00 0.00 4.52
2984 5303 2.164338 GGGTCAGTAAAATCCGGCAAA 58.836 47.619 0.00 0.00 0.00 3.68
2985 5304 2.559231 GGGTCAGTAAAATCCGGCAAAA 59.441 45.455 0.00 0.00 0.00 2.44
2986 5305 3.006003 GGGTCAGTAAAATCCGGCAAAAA 59.994 43.478 0.00 0.00 0.00 1.94
3009 5328 8.693542 AAAATCAAGAAAAAGTGAGAACAGTG 57.306 30.769 0.00 0.00 0.00 3.66
3010 5329 7.396540 AATCAAGAAAAAGTGAGAACAGTGT 57.603 32.000 0.00 0.00 0.00 3.55
3011 5330 6.422776 TCAAGAAAAAGTGAGAACAGTGTC 57.577 37.500 0.00 0.00 0.00 3.67
3012 5331 6.173339 TCAAGAAAAAGTGAGAACAGTGTCT 58.827 36.000 0.00 0.00 0.00 3.41
3013 5332 6.655003 TCAAGAAAAAGTGAGAACAGTGTCTT 59.345 34.615 0.00 0.00 31.78 3.01
3014 5333 6.428385 AGAAAAAGTGAGAACAGTGTCTTG 57.572 37.500 0.00 0.00 0.00 3.02
3015 5334 5.355350 AGAAAAAGTGAGAACAGTGTCTTGG 59.645 40.000 0.00 0.00 0.00 3.61
3016 5335 4.487714 AAAGTGAGAACAGTGTCTTGGA 57.512 40.909 0.00 0.00 0.00 3.53
3017 5336 3.742433 AGTGAGAACAGTGTCTTGGAG 57.258 47.619 0.00 0.00 0.00 3.86
3018 5337 2.139118 GTGAGAACAGTGTCTTGGAGC 58.861 52.381 0.00 0.00 0.00 4.70
3019 5338 2.042464 TGAGAACAGTGTCTTGGAGCT 58.958 47.619 0.00 0.00 0.00 4.09
3020 5339 2.036475 TGAGAACAGTGTCTTGGAGCTC 59.964 50.000 4.71 4.71 0.00 4.09
3021 5340 2.036475 GAGAACAGTGTCTTGGAGCTCA 59.964 50.000 17.19 0.00 0.00 4.26
3022 5341 2.036992 AGAACAGTGTCTTGGAGCTCAG 59.963 50.000 17.19 5.30 0.00 3.35
3023 5342 0.683973 ACAGTGTCTTGGAGCTCAGG 59.316 55.000 17.19 4.78 0.00 3.86
3024 5343 0.036577 CAGTGTCTTGGAGCTCAGGG 60.037 60.000 17.19 4.40 0.00 4.45
3025 5344 0.178921 AGTGTCTTGGAGCTCAGGGA 60.179 55.000 17.19 6.85 0.00 4.20
3026 5345 0.908198 GTGTCTTGGAGCTCAGGGAT 59.092 55.000 17.19 0.00 0.00 3.85
3027 5346 0.907486 TGTCTTGGAGCTCAGGGATG 59.093 55.000 17.19 0.00 0.00 3.51
3028 5347 0.463474 GTCTTGGAGCTCAGGGATGC 60.463 60.000 17.19 0.00 0.00 3.91
3029 5348 0.911045 TCTTGGAGCTCAGGGATGCA 60.911 55.000 17.19 0.00 0.00 3.96
3030 5349 0.183014 CTTGGAGCTCAGGGATGCAT 59.817 55.000 17.19 0.00 30.59 3.96
3031 5350 0.106868 TTGGAGCTCAGGGATGCATG 60.107 55.000 17.19 0.00 30.59 4.06
3032 5351 1.276859 TGGAGCTCAGGGATGCATGT 61.277 55.000 17.19 0.00 0.00 3.21
3033 5352 0.106819 GGAGCTCAGGGATGCATGTT 60.107 55.000 17.19 0.00 0.00 2.71
3034 5353 1.684248 GGAGCTCAGGGATGCATGTTT 60.684 52.381 17.19 0.00 0.00 2.83
3035 5354 2.097825 GAGCTCAGGGATGCATGTTTT 58.902 47.619 9.40 0.00 0.00 2.43
3036 5355 3.282021 GAGCTCAGGGATGCATGTTTTA 58.718 45.455 9.40 0.00 0.00 1.52
3037 5356 3.019564 AGCTCAGGGATGCATGTTTTAC 58.980 45.455 2.46 0.00 0.00 2.01
3038 5357 3.019564 GCTCAGGGATGCATGTTTTACT 58.980 45.455 2.46 0.00 0.00 2.24
3039 5358 4.080356 AGCTCAGGGATGCATGTTTTACTA 60.080 41.667 2.46 0.00 0.00 1.82
3040 5359 4.823989 GCTCAGGGATGCATGTTTTACTAT 59.176 41.667 2.46 0.00 0.00 2.12
3041 5360 5.300286 GCTCAGGGATGCATGTTTTACTATT 59.700 40.000 2.46 0.00 0.00 1.73
3042 5361 6.183360 GCTCAGGGATGCATGTTTTACTATTT 60.183 38.462 2.46 0.00 0.00 1.40
3043 5362 7.631377 GCTCAGGGATGCATGTTTTACTATTTT 60.631 37.037 2.46 0.00 0.00 1.82
3044 5363 8.133024 TCAGGGATGCATGTTTTACTATTTTT 57.867 30.769 2.46 0.00 0.00 1.94
3064 5383 4.582701 TTTTGCTGGTCAATGTTACCTG 57.417 40.909 0.00 0.00 37.91 4.00
3065 5384 3.500448 TTGCTGGTCAATGTTACCTGA 57.500 42.857 0.00 0.00 37.98 3.86
3066 5385 3.500448 TGCTGGTCAATGTTACCTGAA 57.500 42.857 0.00 0.00 37.98 3.02
3067 5386 3.826524 TGCTGGTCAATGTTACCTGAAA 58.173 40.909 0.00 0.00 37.98 2.69
3068 5387 4.406456 TGCTGGTCAATGTTACCTGAAAT 58.594 39.130 0.00 0.00 37.98 2.17
3069 5388 4.458989 TGCTGGTCAATGTTACCTGAAATC 59.541 41.667 0.00 0.00 37.98 2.17
3070 5389 4.458989 GCTGGTCAATGTTACCTGAAATCA 59.541 41.667 0.00 0.00 37.98 2.57
3071 5390 5.126061 GCTGGTCAATGTTACCTGAAATCAT 59.874 40.000 0.00 0.00 37.98 2.45
3072 5391 6.350445 GCTGGTCAATGTTACCTGAAATCATT 60.350 38.462 0.00 0.00 37.98 2.57
3073 5392 7.148086 GCTGGTCAATGTTACCTGAAATCATTA 60.148 37.037 0.00 0.00 37.98 1.90
3074 5393 8.821686 TGGTCAATGTTACCTGAAATCATTAT 57.178 30.769 0.00 0.00 37.91 1.28
3075 5394 8.685427 TGGTCAATGTTACCTGAAATCATTATG 58.315 33.333 0.00 0.00 37.91 1.90
3076 5395 8.902806 GGTCAATGTTACCTGAAATCATTATGA 58.097 33.333 0.00 0.00 33.97 2.15
3077 5396 9.941664 GTCAATGTTACCTGAAATCATTATGAG 57.058 33.333 0.29 0.00 0.00 2.90
3078 5397 9.123902 TCAATGTTACCTGAAATCATTATGAGG 57.876 33.333 0.29 0.00 0.00 3.86
3079 5398 8.906867 CAATGTTACCTGAAATCATTATGAGGT 58.093 33.333 7.94 7.94 0.00 3.85
3080 5399 9.479549 AATGTTACCTGAAATCATTATGAGGTT 57.520 29.630 8.10 1.73 0.00 3.50
3081 5400 8.506168 TGTTACCTGAAATCATTATGAGGTTC 57.494 34.615 8.10 10.25 0.00 3.62
3082 5401 8.328758 TGTTACCTGAAATCATTATGAGGTTCT 58.671 33.333 16.95 5.51 30.20 3.01
3083 5402 9.832445 GTTACCTGAAATCATTATGAGGTTCTA 57.168 33.333 16.95 7.56 30.20 2.10
3092 5411 9.712305 AATCATTATGAGGTTCTAATAGGTTCG 57.288 33.333 0.29 0.00 0.00 3.95
3093 5412 8.246430 TCATTATGAGGTTCTAATAGGTTCGT 57.754 34.615 0.00 0.00 0.00 3.85
3094 5413 8.358148 TCATTATGAGGTTCTAATAGGTTCGTC 58.642 37.037 0.00 0.00 0.00 4.20
3095 5414 4.996788 TGAGGTTCTAATAGGTTCGTCC 57.003 45.455 0.00 0.00 0.00 4.79
3097 5416 5.021458 TGAGGTTCTAATAGGTTCGTCCTT 58.979 41.667 7.16 0.00 45.67 3.36
3098 5417 5.105473 TGAGGTTCTAATAGGTTCGTCCTTG 60.105 44.000 7.16 0.00 45.67 3.61
3099 5418 4.776308 AGGTTCTAATAGGTTCGTCCTTGT 59.224 41.667 7.16 0.32 45.67 3.16
3100 5419 5.954150 AGGTTCTAATAGGTTCGTCCTTGTA 59.046 40.000 7.16 1.28 45.67 2.41
3101 5420 6.438425 AGGTTCTAATAGGTTCGTCCTTGTAA 59.562 38.462 7.16 0.00 45.67 2.41
3102 5421 7.125356 AGGTTCTAATAGGTTCGTCCTTGTAAT 59.875 37.037 7.16 0.00 45.67 1.89
3103 5422 7.437565 GGTTCTAATAGGTTCGTCCTTGTAATC 59.562 40.741 7.16 0.00 45.67 1.75
3104 5423 7.893124 TCTAATAGGTTCGTCCTTGTAATCT 57.107 36.000 7.16 0.00 45.67 2.40
3105 5424 7.713750 TCTAATAGGTTCGTCCTTGTAATCTG 58.286 38.462 7.16 0.00 45.67 2.90
3106 5425 2.973945 AGGTTCGTCCTTGTAATCTGC 58.026 47.619 0.00 0.00 45.67 4.26
3107 5426 2.301870 AGGTTCGTCCTTGTAATCTGCA 59.698 45.455 0.00 0.00 45.67 4.41
3108 5427 2.673368 GGTTCGTCCTTGTAATCTGCAG 59.327 50.000 7.63 7.63 0.00 4.41
3109 5428 2.672961 TCGTCCTTGTAATCTGCAGG 57.327 50.000 15.13 0.00 0.00 4.85
3110 5429 2.176045 TCGTCCTTGTAATCTGCAGGA 58.824 47.619 15.13 0.00 0.00 3.86
3111 5430 2.766263 TCGTCCTTGTAATCTGCAGGAT 59.234 45.455 15.13 5.61 35.97 3.24
3112 5431 3.958147 TCGTCCTTGTAATCTGCAGGATA 59.042 43.478 15.13 4.53 33.71 2.59
3113 5432 4.588951 TCGTCCTTGTAATCTGCAGGATAT 59.411 41.667 15.13 0.00 33.71 1.63
3114 5433 4.687948 CGTCCTTGTAATCTGCAGGATATG 59.312 45.833 15.13 1.03 33.71 1.78
3115 5434 5.509670 CGTCCTTGTAATCTGCAGGATATGA 60.510 44.000 15.13 0.00 33.71 2.15
3116 5435 6.471146 GTCCTTGTAATCTGCAGGATATGAT 58.529 40.000 15.13 0.00 33.71 2.45
3117 5436 6.370994 GTCCTTGTAATCTGCAGGATATGATG 59.629 42.308 15.13 0.00 33.71 3.07
3118 5437 6.270695 TCCTTGTAATCTGCAGGATATGATGA 59.729 38.462 15.13 0.34 33.71 2.92
3119 5438 6.594547 CCTTGTAATCTGCAGGATATGATGAG 59.405 42.308 15.13 1.85 33.71 2.90
3120 5439 6.046290 TGTAATCTGCAGGATATGATGAGG 57.954 41.667 15.13 0.00 33.71 3.86
3121 5440 5.545335 TGTAATCTGCAGGATATGATGAGGT 59.455 40.000 15.13 0.00 33.71 3.85
3122 5441 4.554960 ATCTGCAGGATATGATGAGGTG 57.445 45.455 15.13 0.00 32.04 4.00
3123 5442 3.580039 TCTGCAGGATATGATGAGGTGA 58.420 45.455 15.13 0.00 0.00 4.02
3124 5443 3.969312 TCTGCAGGATATGATGAGGTGAA 59.031 43.478 15.13 0.00 0.00 3.18
3125 5444 4.409901 TCTGCAGGATATGATGAGGTGAAA 59.590 41.667 15.13 0.00 0.00 2.69
3126 5445 4.711399 TGCAGGATATGATGAGGTGAAAG 58.289 43.478 0.00 0.00 0.00 2.62
3127 5446 4.164796 TGCAGGATATGATGAGGTGAAAGT 59.835 41.667 0.00 0.00 0.00 2.66
3128 5447 4.514441 GCAGGATATGATGAGGTGAAAGTG 59.486 45.833 0.00 0.00 0.00 3.16
3129 5448 5.061853 CAGGATATGATGAGGTGAAAGTGG 58.938 45.833 0.00 0.00 0.00 4.00
3130 5449 4.723789 AGGATATGATGAGGTGAAAGTGGT 59.276 41.667 0.00 0.00 0.00 4.16
3131 5450 5.059833 GGATATGATGAGGTGAAAGTGGTC 58.940 45.833 0.00 0.00 0.00 4.02
3132 5451 5.396772 GGATATGATGAGGTGAAAGTGGTCA 60.397 44.000 0.00 0.00 0.00 4.02
3133 5452 3.126001 TGATGAGGTGAAAGTGGTCAC 57.874 47.619 0.00 0.00 45.99 3.67
3148 5467 5.344207 GTGGTCACACTTCTTTATCACAC 57.656 43.478 0.00 0.00 44.29 3.82
3149 5468 4.213482 GTGGTCACACTTCTTTATCACACC 59.787 45.833 0.00 0.00 44.29 4.16
3150 5469 4.141597 TGGTCACACTTCTTTATCACACCA 60.142 41.667 0.00 0.00 0.00 4.17
3151 5470 4.213482 GGTCACACTTCTTTATCACACCAC 59.787 45.833 0.00 0.00 0.00 4.16
3152 5471 4.055360 TCACACTTCTTTATCACACCACG 58.945 43.478 0.00 0.00 0.00 4.94
3153 5472 4.055360 CACACTTCTTTATCACACCACGA 58.945 43.478 0.00 0.00 0.00 4.35
3154 5473 4.690748 CACACTTCTTTATCACACCACGAT 59.309 41.667 0.00 0.00 0.00 3.73
3155 5474 5.179368 CACACTTCTTTATCACACCACGATT 59.821 40.000 0.00 0.00 0.00 3.34
3156 5475 5.179368 ACACTTCTTTATCACACCACGATTG 59.821 40.000 0.00 0.00 0.00 2.67
3157 5476 5.179368 CACTTCTTTATCACACCACGATTGT 59.821 40.000 0.00 0.00 0.00 2.71
3158 5477 5.763204 ACTTCTTTATCACACCACGATTGTT 59.237 36.000 0.00 0.00 0.00 2.83
3159 5478 5.605564 TCTTTATCACACCACGATTGTTG 57.394 39.130 0.00 0.00 0.00 3.33
3160 5479 4.454161 TCTTTATCACACCACGATTGTTGG 59.546 41.667 0.00 0.00 0.00 3.77
3161 5480 0.881118 ATCACACCACGATTGTTGGC 59.119 50.000 0.00 0.00 0.00 4.52
3162 5481 0.464554 TCACACCACGATTGTTGGCA 60.465 50.000 0.00 0.00 0.00 4.92
3163 5482 0.597568 CACACCACGATTGTTGGCAT 59.402 50.000 0.00 0.00 0.00 4.40
3164 5483 0.597568 ACACCACGATTGTTGGCATG 59.402 50.000 0.00 0.00 0.00 4.06
3165 5484 0.109179 CACCACGATTGTTGGCATGG 60.109 55.000 0.00 0.00 0.00 3.66
3166 5485 1.153784 CCACGATTGTTGGCATGGC 60.154 57.895 13.29 13.29 0.00 4.40
3167 5486 1.597797 CCACGATTGTTGGCATGGCT 61.598 55.000 21.08 0.00 0.00 4.75
3168 5487 1.093972 CACGATTGTTGGCATGGCTA 58.906 50.000 21.08 10.42 0.00 3.93
3169 5488 1.472082 CACGATTGTTGGCATGGCTAA 59.528 47.619 21.08 12.88 0.00 3.09
3170 5489 2.094803 CACGATTGTTGGCATGGCTAAA 60.095 45.455 21.08 11.94 29.49 1.85
3171 5490 2.560542 ACGATTGTTGGCATGGCTAAAA 59.439 40.909 21.08 14.66 29.49 1.52
3172 5491 3.006323 ACGATTGTTGGCATGGCTAAAAA 59.994 39.130 21.08 13.79 31.25 1.94
3173 5492 3.367630 CGATTGTTGGCATGGCTAAAAAC 59.632 43.478 21.08 15.83 29.53 2.43
3174 5493 2.829741 TGTTGGCATGGCTAAAAACC 57.170 45.000 21.08 1.14 29.49 3.27
3175 5494 2.042464 TGTTGGCATGGCTAAAAACCA 58.958 42.857 21.08 3.91 42.61 3.67
3176 5495 2.435805 TGTTGGCATGGCTAAAAACCAA 59.564 40.909 21.08 6.93 41.49 3.67
3177 5496 3.118261 TGTTGGCATGGCTAAAAACCAAA 60.118 39.130 21.08 0.00 41.49 3.28
3178 5497 3.118905 TGGCATGGCTAAAAACCAAAC 57.881 42.857 21.08 0.00 41.49 2.93
3179 5498 2.435805 TGGCATGGCTAAAAACCAAACA 59.564 40.909 21.08 0.00 41.49 2.83
3180 5499 3.072184 TGGCATGGCTAAAAACCAAACAT 59.928 39.130 21.08 0.00 41.49 2.71
3181 5500 4.284490 TGGCATGGCTAAAAACCAAACATA 59.716 37.500 21.08 0.00 41.49 2.29
3182 5501 5.221722 TGGCATGGCTAAAAACCAAACATAA 60.222 36.000 21.08 0.00 41.49 1.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 1.666189 GTGAAACGAGCTATTGAGGCC 59.334 52.381 0.00 0.00 0.00 5.19
58 59 2.692709 TGATTTGGCCTCCTGGAAAA 57.307 45.000 3.32 0.00 34.57 2.29
123 124 5.595885 CATAGAACAACCGTGAGATGATCT 58.404 41.667 0.00 0.00 35.38 2.75
131 132 4.729227 TGATAGCATAGAACAACCGTGA 57.271 40.909 0.00 0.00 0.00 4.35
326 327 1.474077 GTGATCACAAAGATGGCACCC 59.526 52.381 21.07 0.00 37.00 4.61
498 520 0.178767 CAGGTTGGCCTCGATGATGA 59.821 55.000 3.32 0.00 44.97 2.92
512 534 2.143876 ACAGTCAAGGTTTGCAGGTT 57.856 45.000 0.00 0.00 0.00 3.50
532 554 8.362639 AGTACCTCGACTTTTTGTTTACTATGA 58.637 33.333 0.00 0.00 0.00 2.15
600 622 0.106149 AACGAAGACACCGAGCCTTT 59.894 50.000 0.00 0.00 0.00 3.11
611 633 4.733405 GGAAACATGTCAAACAACGAAGAC 59.267 41.667 0.00 0.00 0.00 3.01
769 795 7.736447 AAAATTTTCCGTGAATTTTGGCATA 57.264 28.000 0.00 0.00 42.16 3.14
825 851 1.586154 CCGGTGAATTTCAGGCGCTT 61.586 55.000 7.64 0.00 0.00 4.68
954 981 5.128919 GTCTAATACTCCCTCCGTTCACTA 58.871 45.833 0.00 0.00 0.00 2.74
961 988 1.614413 GCCTGTCTAATACTCCCTCCG 59.386 57.143 0.00 0.00 0.00 4.63
977 1004 0.238289 GTGTTGATTGTGACCGCCTG 59.762 55.000 0.00 0.00 0.00 4.85
982 1009 4.881273 TGGCATATAGTGTTGATTGTGACC 59.119 41.667 0.00 0.00 0.00 4.02
1008 1039 6.851222 AGAATGCTACCAAAGATAATCACG 57.149 37.500 0.00 0.00 0.00 4.35
1096 1132 5.945784 TCAATTTCCCAATAGTTGAGGTCAG 59.054 40.000 0.00 0.00 0.00 3.51
1108 1144 7.229106 CCAAAGAATGTTTGTCAATTTCCCAAT 59.771 33.333 2.22 0.00 0.00 3.16
1118 1154 4.341806 AGTCATGCCAAAGAATGTTTGTCA 59.658 37.500 2.22 0.00 0.00 3.58
1190 1227 0.107214 CCCCGCTATCCACACAACAT 60.107 55.000 0.00 0.00 0.00 2.71
1204 1241 0.958876 CCTGAACCACTTAACCCCGC 60.959 60.000 0.00 0.00 0.00 6.13
1331 1373 2.433318 GAGTGCAGCTCGTGACCC 60.433 66.667 0.00 0.00 34.13 4.46
1336 1378 2.644212 CCTCTGGAGTGCAGCTCGT 61.644 63.158 6.80 0.00 45.03 4.18
1411 1457 4.502962 CAAGGTCCTTTGCTTTGAAACAA 58.497 39.130 0.00 0.00 0.00 2.83
1431 1477 7.270047 ACCTACTCTGCGTATATTTTTAGCAA 58.730 34.615 0.00 0.00 37.38 3.91
1436 1482 9.609346 AAACATACCTACTCTGCGTATATTTTT 57.391 29.630 0.00 0.00 0.00 1.94
1580 1628 3.613030 TCAAGCTAGCAATGCAGATCAA 58.387 40.909 18.83 0.00 0.00 2.57
1646 1694 9.466497 ACATACCTCAATGAATGTAGAATTGTT 57.534 29.630 0.00 0.00 33.84 2.83
1719 1785 9.594936 ACCTATAGAAATACACTTCTCTATGCT 57.405 33.333 0.00 0.00 36.95 3.79
1740 1807 5.393866 AGTGGGACATTCAAAAACACCTAT 58.606 37.500 0.00 0.00 44.52 2.57
1807 1874 5.048294 CACCTTTAATTTTTCTAGCACGGGT 60.048 40.000 0.00 0.00 0.00 5.28
1816 1883 9.378551 GTTGGTTCTTTCACCTTTAATTTTTCT 57.621 29.630 0.00 0.00 37.75 2.52
1824 1891 5.751586 AGTCTGTTGGTTCTTTCACCTTTA 58.248 37.500 0.00 0.00 37.75 1.85
1831 1898 3.821748 AGGGAAGTCTGTTGGTTCTTTC 58.178 45.455 0.00 0.00 0.00 2.62
1882 1951 5.424757 CAGTGAACCCTACGGATGATTTAA 58.575 41.667 0.00 0.00 0.00 1.52
1894 1964 5.397899 GGATCATCAATTCCAGTGAACCCTA 60.398 44.000 0.00 0.00 32.13 3.53
1934 3048 6.764877 ATATTTACGCTAACCTCACAATCG 57.235 37.500 0.00 0.00 0.00 3.34
1940 3054 7.148373 GGTGTTCAAATATTTACGCTAACCTCA 60.148 37.037 12.21 0.00 0.00 3.86
2019 3563 4.991056 CCCATCATCATACAACTAGGAACG 59.009 45.833 0.00 0.00 0.00 3.95
2034 3582 9.903682 CAATCAATGAAGTTAATACCCATCATC 57.096 33.333 0.00 0.00 0.00 2.92
2049 3597 5.654497 GGTTAAAGGGCTCAATCAATGAAG 58.346 41.667 0.00 0.00 37.67 3.02
2156 4021 4.479158 TCCTGTAAGAACCCATTTGCTTT 58.521 39.130 0.00 0.00 34.07 3.51
2166 4197 5.579564 ACGTCTCTAATCCTGTAAGAACC 57.420 43.478 0.00 0.00 34.07 3.62
2205 4236 4.475051 TGGCAATCCAATTTCCAGAATG 57.525 40.909 0.00 0.00 39.99 2.67
2222 4254 1.080638 ACCTCAAATACCCCTTGGCA 58.919 50.000 0.00 0.00 33.59 4.92
2251 4291 9.253832 CCCATACTATCATCACTCTTTCTAGAT 57.746 37.037 0.00 0.00 0.00 1.98
2316 4583 7.596995 TGTTGGGTCGAAACATTTCAATTTATC 59.403 33.333 5.28 0.00 37.01 1.75
2337 4604 3.366679 GCCACATGAGTCATTCTTGTTGG 60.367 47.826 1.86 5.94 40.94 3.77
2442 4711 9.413734 CCACTTTATTCAAGGGATTCTTTAGAT 57.586 33.333 0.00 0.00 38.32 1.98
2444 4713 8.807948 TCCACTTTATTCAAGGGATTCTTTAG 57.192 34.615 0.00 0.00 38.32 1.85
2450 4722 9.942526 ATAAGAATCCACTTTATTCAAGGGATT 57.057 29.630 13.08 13.08 45.73 3.01
2451 4723 9.579932 GATAAGAATCCACTTTATTCAAGGGAT 57.420 33.333 0.00 0.00 38.32 3.85
2562 4880 9.575783 CTAGGGATCTAAACGCTCTTATATTTC 57.424 37.037 0.00 0.00 32.98 2.17
2611 4929 3.261643 TCTTGGTATCCTCATGCGCATAT 59.738 43.478 24.84 15.48 0.00 1.78
2617 4935 6.455360 TGAAAATTCTTGGTATCCTCATGC 57.545 37.500 0.00 0.00 0.00 4.06
2637 4955 9.249457 CTATAGAAGTTGAGTAAATGCGATGAA 57.751 33.333 0.00 0.00 0.00 2.57
2638 4956 8.630037 TCTATAGAAGTTGAGTAAATGCGATGA 58.370 33.333 0.00 0.00 0.00 2.92
2645 4963 9.360093 GCGCATATCTATAGAAGTTGAGTAAAT 57.640 33.333 6.52 0.00 0.00 1.40
2646 4964 8.357402 TGCGCATATCTATAGAAGTTGAGTAAA 58.643 33.333 5.66 0.00 0.00 2.01
2649 4967 6.332735 TGCGCATATCTATAGAAGTTGAGT 57.667 37.500 5.66 0.00 0.00 3.41
2650 4968 7.031975 TCATGCGCATATCTATAGAAGTTGAG 58.968 38.462 24.84 4.24 0.00 3.02
2651 4969 6.924111 TCATGCGCATATCTATAGAAGTTGA 58.076 36.000 24.84 9.62 0.00 3.18
2652 4970 6.255237 CCTCATGCGCATATCTATAGAAGTTG 59.745 42.308 24.84 7.08 0.00 3.16
2653 4971 6.153510 TCCTCATGCGCATATCTATAGAAGTT 59.846 38.462 24.84 0.00 0.00 2.66
2654 4972 5.654209 TCCTCATGCGCATATCTATAGAAGT 59.346 40.000 24.84 0.00 0.00 3.01
2655 4973 6.141560 TCCTCATGCGCATATCTATAGAAG 57.858 41.667 24.84 8.18 0.00 2.85
2656 4974 6.548993 AGATCCTCATGCGCATATCTATAGAA 59.451 38.462 24.92 5.33 0.00 2.10
2657 4975 6.016443 CAGATCCTCATGCGCATATCTATAGA 60.016 42.308 25.41 15.89 0.00 1.98
2658 4976 6.151004 CAGATCCTCATGCGCATATCTATAG 58.849 44.000 25.41 14.37 0.00 1.31
2659 4977 5.508657 GCAGATCCTCATGCGCATATCTATA 60.509 44.000 25.41 11.16 31.87 1.31
2661 4979 3.429960 GCAGATCCTCATGCGCATATCTA 60.430 47.826 25.41 13.30 31.87 1.98
2665 4983 0.393820 TGCAGATCCTCATGCGCATA 59.606 50.000 24.84 7.98 45.54 3.14
2666 4984 0.250770 ATGCAGATCCTCATGCGCAT 60.251 50.000 19.28 19.28 45.54 4.73
2667 4985 0.883370 GATGCAGATCCTCATGCGCA 60.883 55.000 14.96 14.96 45.54 6.09
2668 4986 0.603172 AGATGCAGATCCTCATGCGC 60.603 55.000 0.00 0.00 45.54 6.09
2669 4987 1.149148 CAGATGCAGATCCTCATGCG 58.851 55.000 0.00 0.00 45.54 4.73
2670 4988 0.875728 GCAGATGCAGATCCTCATGC 59.124 55.000 0.00 0.24 42.86 4.06
2682 5000 6.668541 TCTTAATCTACAGTTTGCAGATGC 57.331 37.500 0.00 0.00 31.22 3.91
2707 5025 6.515272 AAGGTTGAGTAAATGCGATGAAAT 57.485 33.333 0.00 0.00 0.00 2.17
2782 5100 4.784838 TCATCCCCAAGGTATCTCCATATG 59.215 45.833 0.00 0.00 39.02 1.78
2801 5119 0.391661 TTTCTCCGGTGCTGCTCATC 60.392 55.000 0.00 0.00 0.00 2.92
2807 5125 5.309323 TGAAATTATTTTCTCCGGTGCTG 57.691 39.130 0.00 0.00 41.54 4.41
2813 5132 6.914757 GGCAGAAGATGAAATTATTTTCTCCG 59.085 38.462 10.54 0.00 41.54 4.63
2817 5136 9.643693 TCAAAGGCAGAAGATGAAATTATTTTC 57.356 29.630 3.62 3.62 41.39 2.29
2830 5149 3.576078 TTCCAACTCAAAGGCAGAAGA 57.424 42.857 0.00 0.00 0.00 2.87
2831 5150 4.861102 AATTCCAACTCAAAGGCAGAAG 57.139 40.909 0.00 0.00 0.00 2.85
2832 5151 6.603201 CCTATAATTCCAACTCAAAGGCAGAA 59.397 38.462 0.00 0.00 0.00 3.02
2833 5152 6.069673 TCCTATAATTCCAACTCAAAGGCAGA 60.070 38.462 0.00 0.00 0.00 4.26
2834 5153 6.122277 TCCTATAATTCCAACTCAAAGGCAG 58.878 40.000 0.00 0.00 0.00 4.85
2835 5154 6.073447 TCCTATAATTCCAACTCAAAGGCA 57.927 37.500 0.00 0.00 0.00 4.75
2836 5155 7.093945 TGTTTCCTATAATTCCAACTCAAAGGC 60.094 37.037 0.00 0.00 0.00 4.35
2837 5156 8.348285 TGTTTCCTATAATTCCAACTCAAAGG 57.652 34.615 0.00 0.00 0.00 3.11
2839 5158 8.966868 GGATGTTTCCTATAATTCCAACTCAAA 58.033 33.333 0.00 0.00 39.14 2.69
2840 5159 8.112822 TGGATGTTTCCTATAATTCCAACTCAA 58.887 33.333 0.00 0.00 43.07 3.02
2841 5160 7.638444 TGGATGTTTCCTATAATTCCAACTCA 58.362 34.615 0.00 0.00 43.07 3.41
2842 5161 8.697507 ATGGATGTTTCCTATAATTCCAACTC 57.302 34.615 0.00 0.00 43.07 3.01
2843 5162 9.492730 AAATGGATGTTTCCTATAATTCCAACT 57.507 29.630 0.00 0.00 43.07 3.16
2844 5163 9.533253 CAAATGGATGTTTCCTATAATTCCAAC 57.467 33.333 0.00 0.00 43.07 3.77
2845 5164 8.203485 GCAAATGGATGTTTCCTATAATTCCAA 58.797 33.333 0.00 0.00 43.07 3.53
2846 5165 7.201992 GGCAAATGGATGTTTCCTATAATTCCA 60.202 37.037 0.00 0.00 43.07 3.53
2847 5166 7.154656 GGCAAATGGATGTTTCCTATAATTCC 58.845 38.462 0.00 0.00 43.07 3.01
2848 5167 7.725251 TGGCAAATGGATGTTTCCTATAATTC 58.275 34.615 0.00 0.00 43.07 2.17
2849 5168 7.673641 TGGCAAATGGATGTTTCCTATAATT 57.326 32.000 0.00 0.00 43.07 1.40
2850 5169 7.860649 ATGGCAAATGGATGTTTCCTATAAT 57.139 32.000 0.00 0.00 43.07 1.28
2851 5170 8.954834 ATATGGCAAATGGATGTTTCCTATAA 57.045 30.769 0.00 0.00 43.07 0.98
2852 5171 8.954834 AATATGGCAAATGGATGTTTCCTATA 57.045 30.769 0.00 0.00 43.07 1.31
2853 5172 7.860649 AATATGGCAAATGGATGTTTCCTAT 57.139 32.000 0.00 0.00 43.07 2.57
2854 5173 7.564660 AGAAATATGGCAAATGGATGTTTCCTA 59.435 33.333 0.00 0.00 43.07 2.94
2855 5174 6.384886 AGAAATATGGCAAATGGATGTTTCCT 59.615 34.615 0.00 0.00 43.07 3.36
2856 5175 6.480981 CAGAAATATGGCAAATGGATGTTTCC 59.519 38.462 0.00 0.00 42.94 3.13
2857 5176 6.480981 CCAGAAATATGGCAAATGGATGTTTC 59.519 38.462 0.00 0.00 32.48 2.78
2858 5177 6.156602 TCCAGAAATATGGCAAATGGATGTTT 59.843 34.615 0.00 0.00 40.41 2.83
2859 5178 5.662208 TCCAGAAATATGGCAAATGGATGTT 59.338 36.000 0.00 0.00 40.41 2.71
2860 5179 5.210430 TCCAGAAATATGGCAAATGGATGT 58.790 37.500 0.00 0.00 40.41 3.06
2861 5180 5.794726 TCCAGAAATATGGCAAATGGATG 57.205 39.130 0.00 0.00 40.41 3.51
2862 5181 6.138263 TCTTCCAGAAATATGGCAAATGGAT 58.862 36.000 0.00 0.00 40.41 3.41
2863 5182 5.517924 TCTTCCAGAAATATGGCAAATGGA 58.482 37.500 0.00 0.00 40.41 3.41
2864 5183 5.857471 TCTTCCAGAAATATGGCAAATGG 57.143 39.130 0.00 0.00 40.41 3.16
2865 5184 6.041182 TCCATCTTCCAGAAATATGGCAAATG 59.959 38.462 13.14 0.00 40.41 2.32
2866 5185 6.138263 TCCATCTTCCAGAAATATGGCAAAT 58.862 36.000 13.14 0.00 40.41 2.32
2867 5186 5.517924 TCCATCTTCCAGAAATATGGCAAA 58.482 37.500 13.14 0.00 40.41 3.68
2868 5187 5.128033 TCCATCTTCCAGAAATATGGCAA 57.872 39.130 13.14 0.41 40.41 4.52
2869 5188 4.794311 TCCATCTTCCAGAAATATGGCA 57.206 40.909 13.14 0.00 40.41 4.92
2870 5189 5.048224 CACATCCATCTTCCAGAAATATGGC 60.048 44.000 13.14 0.00 40.41 4.40
2871 5190 5.048224 GCACATCCATCTTCCAGAAATATGG 60.048 44.000 12.27 12.27 42.11 2.74
2872 5191 5.533528 TGCACATCCATCTTCCAGAAATATG 59.466 40.000 0.00 0.00 0.00 1.78
2873 5192 5.533903 GTGCACATCCATCTTCCAGAAATAT 59.466 40.000 13.17 0.00 0.00 1.28
2874 5193 4.883585 GTGCACATCCATCTTCCAGAAATA 59.116 41.667 13.17 0.00 0.00 1.40
2875 5194 3.698040 GTGCACATCCATCTTCCAGAAAT 59.302 43.478 13.17 0.00 0.00 2.17
2876 5195 3.084039 GTGCACATCCATCTTCCAGAAA 58.916 45.455 13.17 0.00 0.00 2.52
2877 5196 2.306805 AGTGCACATCCATCTTCCAGAA 59.693 45.455 21.04 0.00 0.00 3.02
2878 5197 1.911357 AGTGCACATCCATCTTCCAGA 59.089 47.619 21.04 0.00 0.00 3.86
2879 5198 2.014857 CAGTGCACATCCATCTTCCAG 58.985 52.381 21.04 0.00 0.00 3.86
2880 5199 1.629861 TCAGTGCACATCCATCTTCCA 59.370 47.619 21.04 0.00 0.00 3.53
2881 5200 2.012673 GTCAGTGCACATCCATCTTCC 58.987 52.381 21.04 0.00 0.00 3.46
2882 5201 2.012673 GGTCAGTGCACATCCATCTTC 58.987 52.381 21.04 0.00 0.00 2.87
2883 5202 1.352017 TGGTCAGTGCACATCCATCTT 59.648 47.619 21.04 0.00 0.00 2.40
2884 5203 0.986527 TGGTCAGTGCACATCCATCT 59.013 50.000 21.04 0.00 0.00 2.90
2885 5204 1.674441 CATGGTCAGTGCACATCCATC 59.326 52.381 26.23 11.07 36.86 3.51
2886 5205 1.282738 TCATGGTCAGTGCACATCCAT 59.717 47.619 24.55 24.55 39.14 3.41
2887 5206 0.691904 TCATGGTCAGTGCACATCCA 59.308 50.000 21.04 22.15 0.00 3.41
2888 5207 1.470098 GTTCATGGTCAGTGCACATCC 59.530 52.381 21.04 17.40 0.00 3.51
2889 5208 2.153645 TGTTCATGGTCAGTGCACATC 58.846 47.619 21.04 8.44 0.00 3.06
2890 5209 2.275134 TGTTCATGGTCAGTGCACAT 57.725 45.000 21.04 0.00 0.00 3.21
2891 5210 1.948834 CTTGTTCATGGTCAGTGCACA 59.051 47.619 21.04 0.00 0.00 4.57
2892 5211 1.267806 CCTTGTTCATGGTCAGTGCAC 59.732 52.381 9.40 9.40 0.00 4.57
2893 5212 1.142667 TCCTTGTTCATGGTCAGTGCA 59.857 47.619 0.00 0.00 0.00 4.57
2894 5213 1.896220 TCCTTGTTCATGGTCAGTGC 58.104 50.000 0.00 0.00 0.00 4.40
2895 5214 2.163010 GCATCCTTGTTCATGGTCAGTG 59.837 50.000 0.00 0.00 0.00 3.66
2896 5215 2.224843 TGCATCCTTGTTCATGGTCAGT 60.225 45.455 0.00 0.00 0.00 3.41
2897 5216 2.439409 TGCATCCTTGTTCATGGTCAG 58.561 47.619 0.00 0.00 0.00 3.51
2898 5217 2.583024 TGCATCCTTGTTCATGGTCA 57.417 45.000 0.00 0.00 0.00 4.02
2899 5218 2.480759 GCATGCATCCTTGTTCATGGTC 60.481 50.000 14.21 0.00 37.40 4.02
2900 5219 1.479323 GCATGCATCCTTGTTCATGGT 59.521 47.619 14.21 0.00 37.40 3.55
2901 5220 1.478916 TGCATGCATCCTTGTTCATGG 59.521 47.619 18.46 0.00 37.40 3.66
2902 5221 2.951457 TGCATGCATCCTTGTTCATG 57.049 45.000 18.46 0.00 39.29 3.07
2903 5222 3.259876 AGTTTGCATGCATCCTTGTTCAT 59.740 39.130 23.37 0.00 0.00 2.57
2904 5223 2.629137 AGTTTGCATGCATCCTTGTTCA 59.371 40.909 23.37 0.00 0.00 3.18
2905 5224 3.308438 AGTTTGCATGCATCCTTGTTC 57.692 42.857 23.37 6.09 0.00 3.18
2906 5225 3.322828 AGAAGTTTGCATGCATCCTTGTT 59.677 39.130 27.44 16.84 0.00 2.83
2907 5226 2.895404 AGAAGTTTGCATGCATCCTTGT 59.105 40.909 27.44 22.80 0.00 3.16
2908 5227 3.587797 AGAAGTTTGCATGCATCCTTG 57.412 42.857 27.44 0.00 0.00 3.61
2909 5228 4.612264 AAAGAAGTTTGCATGCATCCTT 57.388 36.364 23.37 24.00 0.00 3.36
2910 5229 4.612264 AAAAGAAGTTTGCATGCATCCT 57.388 36.364 23.37 17.01 0.00 3.24
2911 5230 4.866486 CCTAAAAGAAGTTTGCATGCATCC 59.134 41.667 23.37 14.87 0.00 3.51
2912 5231 5.713025 TCCTAAAAGAAGTTTGCATGCATC 58.287 37.500 23.37 16.06 0.00 3.91
2913 5232 5.726980 TCCTAAAAGAAGTTTGCATGCAT 57.273 34.783 23.37 6.15 0.00 3.96
2914 5233 5.726980 ATCCTAAAAGAAGTTTGCATGCA 57.273 34.783 18.46 18.46 0.00 3.96
2915 5234 6.158598 TGAATCCTAAAAGAAGTTTGCATGC 58.841 36.000 11.82 11.82 0.00 4.06
2916 5235 7.869429 AGTTGAATCCTAAAAGAAGTTTGCATG 59.131 33.333 0.00 0.00 0.00 4.06
2917 5236 7.955918 AGTTGAATCCTAAAAGAAGTTTGCAT 58.044 30.769 0.00 0.00 0.00 3.96
2918 5237 7.346751 AGTTGAATCCTAAAAGAAGTTTGCA 57.653 32.000 0.00 0.00 0.00 4.08
2919 5238 8.648557 AAAGTTGAATCCTAAAAGAAGTTTGC 57.351 30.769 0.00 0.00 0.00 3.68
2935 5254 8.495148 GCGATGGTGAAAAATTTAAAGTTGAAT 58.505 29.630 1.03 0.00 0.00 2.57
2936 5255 7.708752 AGCGATGGTGAAAAATTTAAAGTTGAA 59.291 29.630 1.03 0.00 0.00 2.69
2937 5256 7.206687 AGCGATGGTGAAAAATTTAAAGTTGA 58.793 30.769 1.03 0.00 0.00 3.18
2938 5257 7.406799 AGCGATGGTGAAAAATTTAAAGTTG 57.593 32.000 1.03 0.00 0.00 3.16
2939 5258 7.042119 CCAAGCGATGGTGAAAAATTTAAAGTT 60.042 33.333 0.00 0.00 44.85 2.66
2940 5259 6.423604 CCAAGCGATGGTGAAAAATTTAAAGT 59.576 34.615 3.62 0.00 44.85 2.66
2941 5260 6.820459 CCAAGCGATGGTGAAAAATTTAAAG 58.180 36.000 3.62 0.00 44.85 1.85
2942 5261 6.777526 CCAAGCGATGGTGAAAAATTTAAA 57.222 33.333 3.62 0.00 44.85 1.52
2956 5275 3.065371 GGATTTTACTGACCCAAGCGATG 59.935 47.826 0.00 0.00 0.00 3.84
2957 5276 3.279434 GGATTTTACTGACCCAAGCGAT 58.721 45.455 0.00 0.00 0.00 4.58
2958 5277 2.706890 GGATTTTACTGACCCAAGCGA 58.293 47.619 0.00 0.00 0.00 4.93
2959 5278 1.396996 CGGATTTTACTGACCCAAGCG 59.603 52.381 0.00 0.00 0.00 4.68
2960 5279 1.743394 CCGGATTTTACTGACCCAAGC 59.257 52.381 0.00 0.00 0.00 4.01
2961 5280 1.743394 GCCGGATTTTACTGACCCAAG 59.257 52.381 5.05 0.00 0.00 3.61
2962 5281 1.074084 TGCCGGATTTTACTGACCCAA 59.926 47.619 5.05 0.00 0.00 4.12
2963 5282 0.693622 TGCCGGATTTTACTGACCCA 59.306 50.000 5.05 0.00 0.00 4.51
2964 5283 1.828979 TTGCCGGATTTTACTGACCC 58.171 50.000 5.05 0.00 0.00 4.46
2965 5284 3.926821 TTTTGCCGGATTTTACTGACC 57.073 42.857 5.05 0.00 0.00 4.02
2983 5302 9.143631 CACTGTTCTCACTTTTTCTTGATTTTT 57.856 29.630 0.00 0.00 0.00 1.94
2984 5303 8.306761 ACACTGTTCTCACTTTTTCTTGATTTT 58.693 29.630 0.00 0.00 0.00 1.82
2985 5304 7.830739 ACACTGTTCTCACTTTTTCTTGATTT 58.169 30.769 0.00 0.00 0.00 2.17
2986 5305 7.337942 AGACACTGTTCTCACTTTTTCTTGATT 59.662 33.333 0.00 0.00 0.00 2.57
2987 5306 6.825721 AGACACTGTTCTCACTTTTTCTTGAT 59.174 34.615 0.00 0.00 0.00 2.57
2988 5307 6.173339 AGACACTGTTCTCACTTTTTCTTGA 58.827 36.000 0.00 0.00 0.00 3.02
2989 5308 6.428385 AGACACTGTTCTCACTTTTTCTTG 57.572 37.500 0.00 0.00 0.00 3.02
2990 5309 6.127897 CCAAGACACTGTTCTCACTTTTTCTT 60.128 38.462 0.00 0.00 0.00 2.52
2991 5310 5.355350 CCAAGACACTGTTCTCACTTTTTCT 59.645 40.000 0.00 0.00 0.00 2.52
2992 5311 5.354234 TCCAAGACACTGTTCTCACTTTTTC 59.646 40.000 0.00 0.00 0.00 2.29
2993 5312 5.253330 TCCAAGACACTGTTCTCACTTTTT 58.747 37.500 0.00 0.00 0.00 1.94
2994 5313 4.843728 TCCAAGACACTGTTCTCACTTTT 58.156 39.130 0.00 0.00 0.00 2.27
2995 5314 4.446371 CTCCAAGACACTGTTCTCACTTT 58.554 43.478 0.00 0.00 0.00 2.66
2996 5315 3.742640 GCTCCAAGACACTGTTCTCACTT 60.743 47.826 0.00 0.00 0.00 3.16
2997 5316 2.224161 GCTCCAAGACACTGTTCTCACT 60.224 50.000 0.00 0.00 0.00 3.41
2998 5317 2.139118 GCTCCAAGACACTGTTCTCAC 58.861 52.381 0.00 0.00 0.00 3.51
2999 5318 2.036475 GAGCTCCAAGACACTGTTCTCA 59.964 50.000 0.87 0.00 0.00 3.27
3000 5319 2.036475 TGAGCTCCAAGACACTGTTCTC 59.964 50.000 12.15 0.00 0.00 2.87
3001 5320 2.036992 CTGAGCTCCAAGACACTGTTCT 59.963 50.000 12.15 0.00 0.00 3.01
3002 5321 2.411904 CTGAGCTCCAAGACACTGTTC 58.588 52.381 12.15 0.00 0.00 3.18
3003 5322 1.071385 CCTGAGCTCCAAGACACTGTT 59.929 52.381 12.15 0.00 0.00 3.16
3004 5323 0.683973 CCTGAGCTCCAAGACACTGT 59.316 55.000 12.15 0.00 0.00 3.55
3005 5324 0.036577 CCCTGAGCTCCAAGACACTG 60.037 60.000 12.15 0.00 0.00 3.66
3006 5325 0.178921 TCCCTGAGCTCCAAGACACT 60.179 55.000 12.15 0.00 0.00 3.55
3007 5326 0.908198 ATCCCTGAGCTCCAAGACAC 59.092 55.000 12.15 0.00 0.00 3.67
3008 5327 0.907486 CATCCCTGAGCTCCAAGACA 59.093 55.000 12.15 0.00 0.00 3.41
3009 5328 0.463474 GCATCCCTGAGCTCCAAGAC 60.463 60.000 12.15 0.00 0.00 3.01
3010 5329 0.911045 TGCATCCCTGAGCTCCAAGA 60.911 55.000 12.15 5.16 0.00 3.02
3011 5330 0.183014 ATGCATCCCTGAGCTCCAAG 59.817 55.000 12.15 2.28 0.00 3.61
3012 5331 0.106868 CATGCATCCCTGAGCTCCAA 60.107 55.000 12.15 0.00 0.00 3.53
3013 5332 1.276859 ACATGCATCCCTGAGCTCCA 61.277 55.000 12.15 0.00 0.00 3.86
3014 5333 0.106819 AACATGCATCCCTGAGCTCC 60.107 55.000 12.15 0.00 0.00 4.70
3015 5334 1.760192 AAACATGCATCCCTGAGCTC 58.240 50.000 6.82 6.82 0.00 4.09
3016 5335 2.226962 AAAACATGCATCCCTGAGCT 57.773 45.000 0.00 0.00 0.00 4.09
3017 5336 3.019564 AGTAAAACATGCATCCCTGAGC 58.980 45.455 0.00 0.00 0.00 4.26
3018 5337 6.949352 AATAGTAAAACATGCATCCCTGAG 57.051 37.500 0.00 0.00 0.00 3.35
3019 5338 7.716799 AAAATAGTAAAACATGCATCCCTGA 57.283 32.000 0.00 0.00 0.00 3.86
3042 5361 4.646945 TCAGGTAACATTGACCAGCAAAAA 59.353 37.500 0.00 0.00 40.48 1.94
3043 5362 4.211125 TCAGGTAACATTGACCAGCAAAA 58.789 39.130 0.00 0.00 40.48 2.44
3044 5363 3.826524 TCAGGTAACATTGACCAGCAAA 58.173 40.909 0.00 0.00 40.48 3.68
3045 5364 3.500448 TCAGGTAACATTGACCAGCAA 57.500 42.857 0.00 0.00 39.65 3.91
3046 5365 3.500448 TTCAGGTAACATTGACCAGCA 57.500 42.857 0.00 0.00 39.65 4.41
3047 5366 4.458989 TGATTTCAGGTAACATTGACCAGC 59.541 41.667 0.00 0.00 39.65 4.85
3048 5367 6.764308 ATGATTTCAGGTAACATTGACCAG 57.236 37.500 0.00 0.00 39.65 4.00
3049 5368 8.685427 CATAATGATTTCAGGTAACATTGACCA 58.315 33.333 0.00 0.00 39.65 4.02
3050 5369 8.902806 TCATAATGATTTCAGGTAACATTGACC 58.097 33.333 0.00 0.00 41.41 4.02
3051 5370 9.941664 CTCATAATGATTTCAGGTAACATTGAC 57.058 33.333 0.00 0.00 41.41 3.18
3052 5371 9.123902 CCTCATAATGATTTCAGGTAACATTGA 57.876 33.333 0.00 0.00 41.41 2.57
3053 5372 8.906867 ACCTCATAATGATTTCAGGTAACATTG 58.093 33.333 0.00 0.00 41.41 2.82
3054 5373 9.479549 AACCTCATAATGATTTCAGGTAACATT 57.520 29.630 0.00 0.00 41.41 2.71
3055 5374 9.125026 GAACCTCATAATGATTTCAGGTAACAT 57.875 33.333 3.64 0.00 41.41 2.71
3056 5375 8.328758 AGAACCTCATAATGATTTCAGGTAACA 58.671 33.333 3.64 0.00 41.41 2.41
3057 5376 8.738645 AGAACCTCATAATGATTTCAGGTAAC 57.261 34.615 3.64 2.76 0.00 2.50
3066 5385 9.712305 CGAACCTATTAGAACCTCATAATGATT 57.288 33.333 0.00 0.00 0.00 2.57
3067 5386 8.871125 ACGAACCTATTAGAACCTCATAATGAT 58.129 33.333 0.00 0.00 0.00 2.45
3068 5387 8.246430 ACGAACCTATTAGAACCTCATAATGA 57.754 34.615 0.00 0.00 0.00 2.57
3069 5388 7.599245 GGACGAACCTATTAGAACCTCATAATG 59.401 40.741 0.00 0.00 35.41 1.90
3070 5389 7.668492 GGACGAACCTATTAGAACCTCATAAT 58.332 38.462 0.00 0.00 35.41 1.28
3071 5390 7.047460 GGACGAACCTATTAGAACCTCATAA 57.953 40.000 0.00 0.00 35.41 1.90
3072 5391 6.645790 GGACGAACCTATTAGAACCTCATA 57.354 41.667 0.00 0.00 35.41 2.15
3073 5392 5.532664 GGACGAACCTATTAGAACCTCAT 57.467 43.478 0.00 0.00 35.41 2.90
3074 5393 4.996788 GGACGAACCTATTAGAACCTCA 57.003 45.455 0.00 0.00 35.41 3.86
3087 5406 2.673368 CTGCAGATTACAAGGACGAACC 59.327 50.000 8.42 0.00 39.35 3.62
3088 5407 2.673368 CCTGCAGATTACAAGGACGAAC 59.327 50.000 17.39 0.00 0.00 3.95
3089 5408 2.565391 TCCTGCAGATTACAAGGACGAA 59.435 45.455 17.39 0.00 0.00 3.85
3090 5409 2.176045 TCCTGCAGATTACAAGGACGA 58.824 47.619 17.39 0.00 0.00 4.20
3091 5410 2.672961 TCCTGCAGATTACAAGGACG 57.327 50.000 17.39 0.00 0.00 4.79
3092 5411 5.858381 TCATATCCTGCAGATTACAAGGAC 58.142 41.667 17.39 0.00 36.33 3.85
3093 5412 6.270695 TCATCATATCCTGCAGATTACAAGGA 59.729 38.462 17.39 1.70 36.33 3.36
3094 5413 6.470278 TCATCATATCCTGCAGATTACAAGG 58.530 40.000 17.39 0.00 36.33 3.61
3095 5414 6.594547 CCTCATCATATCCTGCAGATTACAAG 59.405 42.308 17.39 0.00 36.33 3.16
3096 5415 6.043590 ACCTCATCATATCCTGCAGATTACAA 59.956 38.462 17.39 0.00 36.33 2.41
3097 5416 5.545335 ACCTCATCATATCCTGCAGATTACA 59.455 40.000 17.39 0.00 36.33 2.41
3098 5417 5.873712 CACCTCATCATATCCTGCAGATTAC 59.126 44.000 17.39 0.00 36.33 1.89
3099 5418 5.781818 TCACCTCATCATATCCTGCAGATTA 59.218 40.000 17.39 6.67 36.33 1.75
3100 5419 4.596212 TCACCTCATCATATCCTGCAGATT 59.404 41.667 17.39 4.28 36.33 2.40
3101 5420 4.165760 TCACCTCATCATATCCTGCAGAT 58.834 43.478 17.39 9.50 39.15 2.90
3102 5421 3.580039 TCACCTCATCATATCCTGCAGA 58.420 45.455 17.39 1.21 0.00 4.26
3103 5422 4.347360 TTCACCTCATCATATCCTGCAG 57.653 45.455 6.78 6.78 0.00 4.41
3104 5423 4.164796 ACTTTCACCTCATCATATCCTGCA 59.835 41.667 0.00 0.00 0.00 4.41
3105 5424 4.514441 CACTTTCACCTCATCATATCCTGC 59.486 45.833 0.00 0.00 0.00 4.85
3106 5425 5.061853 CCACTTTCACCTCATCATATCCTG 58.938 45.833 0.00 0.00 0.00 3.86
3107 5426 4.723789 ACCACTTTCACCTCATCATATCCT 59.276 41.667 0.00 0.00 0.00 3.24
3108 5427 5.041191 ACCACTTTCACCTCATCATATCC 57.959 43.478 0.00 0.00 0.00 2.59
3109 5428 5.525378 GTGACCACTTTCACCTCATCATATC 59.475 44.000 0.00 0.00 40.15 1.63
3110 5429 5.045651 TGTGACCACTTTCACCTCATCATAT 60.046 40.000 1.62 0.00 44.63 1.78
3111 5430 4.285775 TGTGACCACTTTCACCTCATCATA 59.714 41.667 1.62 0.00 44.63 2.15
3112 5431 3.072915 TGTGACCACTTTCACCTCATCAT 59.927 43.478 1.62 0.00 44.63 2.45
3113 5432 2.437651 TGTGACCACTTTCACCTCATCA 59.562 45.455 1.62 0.00 44.63 3.07
3114 5433 2.808543 GTGTGACCACTTTCACCTCATC 59.191 50.000 1.62 0.00 44.63 2.92
3115 5434 2.851195 GTGTGACCACTTTCACCTCAT 58.149 47.619 1.62 0.00 44.63 2.90
3116 5435 2.325583 GTGTGACCACTTTCACCTCA 57.674 50.000 1.62 0.00 44.63 3.86
3126 5445 4.213482 GGTGTGATAAAGAAGTGTGACCAC 59.787 45.833 0.00 0.00 42.17 4.16
3127 5446 4.141597 TGGTGTGATAAAGAAGTGTGACCA 60.142 41.667 0.00 0.00 0.00 4.02
3128 5447 4.213482 GTGGTGTGATAAAGAAGTGTGACC 59.787 45.833 0.00 0.00 0.00 4.02
3129 5448 4.084537 CGTGGTGTGATAAAGAAGTGTGAC 60.085 45.833 0.00 0.00 0.00 3.67
3130 5449 4.055360 CGTGGTGTGATAAAGAAGTGTGA 58.945 43.478 0.00 0.00 0.00 3.58
3131 5450 4.055360 TCGTGGTGTGATAAAGAAGTGTG 58.945 43.478 0.00 0.00 0.00 3.82
3132 5451 4.330944 TCGTGGTGTGATAAAGAAGTGT 57.669 40.909 0.00 0.00 0.00 3.55
3133 5452 5.179368 ACAATCGTGGTGTGATAAAGAAGTG 59.821 40.000 0.00 0.00 0.00 3.16
3134 5453 5.305585 ACAATCGTGGTGTGATAAAGAAGT 58.694 37.500 0.00 0.00 0.00 3.01
3135 5454 5.862924 ACAATCGTGGTGTGATAAAGAAG 57.137 39.130 0.00 0.00 0.00 2.85
3136 5455 5.049060 CCAACAATCGTGGTGTGATAAAGAA 60.049 40.000 0.00 0.00 41.24 2.52
3137 5456 4.454161 CCAACAATCGTGGTGTGATAAAGA 59.546 41.667 0.00 0.00 41.24 2.52
3138 5457 4.722194 CCAACAATCGTGGTGTGATAAAG 58.278 43.478 0.00 0.00 41.24 1.85
3139 5458 3.057876 GCCAACAATCGTGGTGTGATAAA 60.058 43.478 0.00 0.00 41.24 1.40
3140 5459 2.486203 GCCAACAATCGTGGTGTGATAA 59.514 45.455 0.00 0.00 41.24 1.75
3141 5460 2.080693 GCCAACAATCGTGGTGTGATA 58.919 47.619 0.00 0.00 41.24 2.15
3142 5461 0.881118 GCCAACAATCGTGGTGTGAT 59.119 50.000 0.00 0.00 41.24 3.06
3143 5462 0.464554 TGCCAACAATCGTGGTGTGA 60.465 50.000 0.00 0.00 41.24 3.58
3144 5463 0.597568 ATGCCAACAATCGTGGTGTG 59.402 50.000 0.00 0.00 41.24 3.82
3145 5464 0.597568 CATGCCAACAATCGTGGTGT 59.402 50.000 0.00 0.00 41.24 4.16
3146 5465 0.109179 CCATGCCAACAATCGTGGTG 60.109 55.000 0.00 0.00 42.59 4.17
3147 5466 1.876497 GCCATGCCAACAATCGTGGT 61.876 55.000 0.00 0.00 40.57 4.16
3148 5467 1.153784 GCCATGCCAACAATCGTGG 60.154 57.895 0.00 0.00 41.22 4.94
3149 5468 1.093972 TAGCCATGCCAACAATCGTG 58.906 50.000 0.00 0.00 0.00 4.35
3150 5469 1.832883 TTAGCCATGCCAACAATCGT 58.167 45.000 0.00 0.00 0.00 3.73
3151 5470 2.937469 TTTAGCCATGCCAACAATCG 57.063 45.000 0.00 0.00 0.00 3.34
3152 5471 3.684305 GGTTTTTAGCCATGCCAACAATC 59.316 43.478 0.00 0.00 0.00 2.67
3153 5472 3.072184 TGGTTTTTAGCCATGCCAACAAT 59.928 39.130 0.00 0.00 0.00 2.71
3154 5473 2.435805 TGGTTTTTAGCCATGCCAACAA 59.564 40.909 0.00 0.00 0.00 2.83
3155 5474 2.042464 TGGTTTTTAGCCATGCCAACA 58.958 42.857 0.00 0.00 0.00 3.33
3156 5475 2.829741 TGGTTTTTAGCCATGCCAAC 57.170 45.000 0.00 0.00 0.00 3.77
3157 5476 3.118261 TGTTTGGTTTTTAGCCATGCCAA 60.118 39.130 0.00 0.00 35.71 4.52
3158 5477 2.435805 TGTTTGGTTTTTAGCCATGCCA 59.564 40.909 0.00 0.00 35.71 4.92
3159 5478 3.118905 TGTTTGGTTTTTAGCCATGCC 57.881 42.857 0.00 0.00 35.71 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.