Multiple sequence alignment - TraesCS4A01G161800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G161800 chr4A 100.000 2478 0 0 1 2478 352264210 352261733 0.000000e+00 4577.0
1 TraesCS4A01G161800 chr2D 95.393 955 43 1 547 1501 190430526 190429573 0.000000e+00 1519.0
2 TraesCS4A01G161800 chr5D 94.720 966 48 3 549 1513 189272952 189271989 0.000000e+00 1498.0
3 TraesCS4A01G161800 chr5D 94.513 966 49 4 549 1513 189461754 189460792 0.000000e+00 1487.0
4 TraesCS4A01G161800 chr5A 94.450 955 50 3 547 1501 81480282 81481233 0.000000e+00 1467.0
5 TraesCS4A01G161800 chr5A 93.952 959 57 1 547 1505 676898068 676897111 0.000000e+00 1448.0
6 TraesCS4A01G161800 chr5A 93.867 962 56 3 547 1508 429969787 429968829 0.000000e+00 1447.0
7 TraesCS4A01G161800 chr5A 93.822 955 57 2 547 1501 583625560 583626512 0.000000e+00 1435.0
8 TraesCS4A01G161800 chr6A 94.056 959 52 4 547 1505 120118912 120119865 0.000000e+00 1450.0
9 TraesCS4A01G161800 chr2A 93.717 955 59 1 547 1501 478905691 478906644 0.000000e+00 1430.0
10 TraesCS4A01G161800 chrUn 92.832 558 31 4 1 551 347277406 347277961 0.000000e+00 800.0
11 TraesCS4A01G161800 chrUn 89.062 384 28 3 1502 1883 347277942 347278313 4.830000e-127 464.0
12 TraesCS4A01G161800 chrUn 93.902 164 6 1 1 160 318936605 318936442 6.850000e-61 244.0
13 TraesCS4A01G161800 chrUn 91.463 164 14 0 2315 2478 347277258 347277095 2.480000e-55 226.0
14 TraesCS4A01G161800 chrUn 100.000 38 0 0 2060 2097 318935908 318935945 1.230000e-08 71.3
15 TraesCS4A01G161800 chr4B 86.696 451 60 0 2028 2478 328117228 328117678 3.680000e-138 501.0
16 TraesCS4A01G161800 chr4B 89.844 384 37 2 1502 1883 328116446 328116829 2.210000e-135 492.0
17 TraesCS4A01G161800 chr4B 91.000 300 16 6 1 289 328115716 328116015 6.420000e-106 394.0
18 TraesCS4A01G161800 chr4B 89.600 250 21 2 302 551 328116221 328116465 1.850000e-81 313.0
19 TraesCS4A01G161800 chr6B 81.538 65 12 0 2326 2390 460558103 460558167 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G161800 chr4A 352261733 352264210 2477 True 4577 4577 100.000 1 2478 1 chr4A.!!$R1 2477
1 TraesCS4A01G161800 chr2D 190429573 190430526 953 True 1519 1519 95.393 547 1501 1 chr2D.!!$R1 954
2 TraesCS4A01G161800 chr5D 189271989 189272952 963 True 1498 1498 94.720 549 1513 1 chr5D.!!$R1 964
3 TraesCS4A01G161800 chr5D 189460792 189461754 962 True 1487 1487 94.513 549 1513 1 chr5D.!!$R2 964
4 TraesCS4A01G161800 chr5A 81480282 81481233 951 False 1467 1467 94.450 547 1501 1 chr5A.!!$F1 954
5 TraesCS4A01G161800 chr5A 676897111 676898068 957 True 1448 1448 93.952 547 1505 1 chr5A.!!$R2 958
6 TraesCS4A01G161800 chr5A 429968829 429969787 958 True 1447 1447 93.867 547 1508 1 chr5A.!!$R1 961
7 TraesCS4A01G161800 chr5A 583625560 583626512 952 False 1435 1435 93.822 547 1501 1 chr5A.!!$F2 954
8 TraesCS4A01G161800 chr6A 120118912 120119865 953 False 1450 1450 94.056 547 1505 1 chr6A.!!$F1 958
9 TraesCS4A01G161800 chr2A 478905691 478906644 953 False 1430 1430 93.717 547 1501 1 chr2A.!!$F1 954
10 TraesCS4A01G161800 chrUn 347277406 347278313 907 False 632 800 90.947 1 1883 2 chrUn.!!$F2 1882
11 TraesCS4A01G161800 chr4B 328115716 328117678 1962 False 425 501 89.285 1 2478 4 chr4B.!!$F1 2477

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
331 336 0.036765 GTCATGTGTTGGGGCGACTA 60.037 55.0 0.0 0.0 0.0 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1955 2460 0.032017 ACTATTGGAGGTCGAGGGCT 60.032 55.0 0.0 0.0 0.0 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 0.623723 ATGGTGTTAGGGCCGTGATT 59.376 50.000 8.57 0.00 0.00 2.57
141 146 8.093307 TGAAGCAATAGTTTTGGCATTTTGATA 58.907 29.630 0.00 0.00 0.00 2.15
161 166 6.291377 TGATAACTTCATTATCTGGGCACTC 58.709 40.000 7.87 0.00 46.58 3.51
170 175 1.445582 CTGGGCACTCGTCCGTTAC 60.446 63.158 0.00 0.00 41.18 2.50
186 191 4.625972 CGTTACCCGGAAAGCAATAAAT 57.374 40.909 0.73 0.00 0.00 1.40
187 192 5.738118 CGTTACCCGGAAAGCAATAAATA 57.262 39.130 0.73 0.00 0.00 1.40
188 193 5.744490 CGTTACCCGGAAAGCAATAAATAG 58.256 41.667 0.73 0.00 0.00 1.73
189 194 5.295045 CGTTACCCGGAAAGCAATAAATAGT 59.705 40.000 0.73 0.00 0.00 2.12
190 195 6.183360 CGTTACCCGGAAAGCAATAAATAGTT 60.183 38.462 0.73 0.00 0.00 2.24
191 196 7.541162 GTTACCCGGAAAGCAATAAATAGTTT 58.459 34.615 0.73 0.00 0.00 2.66
192 197 6.599356 ACCCGGAAAGCAATAAATAGTTTT 57.401 33.333 0.73 0.00 0.00 2.43
193 198 6.394809 ACCCGGAAAGCAATAAATAGTTTTG 58.605 36.000 0.73 0.00 0.00 2.44
194 199 6.209788 ACCCGGAAAGCAATAAATAGTTTTGA 59.790 34.615 0.73 0.00 0.00 2.69
195 200 6.530181 CCCGGAAAGCAATAAATAGTTTTGAC 59.470 38.462 0.73 0.00 0.00 3.18
196 201 7.087639 CCGGAAAGCAATAAATAGTTTTGACA 58.912 34.615 0.00 0.00 0.00 3.58
197 202 7.759433 CCGGAAAGCAATAAATAGTTTTGACAT 59.241 33.333 0.00 0.00 0.00 3.06
198 203 9.139174 CGGAAAGCAATAAATAGTTTTGACATT 57.861 29.630 0.00 0.00 0.00 2.71
223 228 9.860650 TTTTGAATATTAGCATATGTACACCCT 57.139 29.630 0.00 0.00 0.00 4.34
233 238 8.848474 AGCATATGTACACCCTATTGTATTTC 57.152 34.615 0.00 0.00 34.50 2.17
234 239 7.602644 AGCATATGTACACCCTATTGTATTTCG 59.397 37.037 0.00 0.00 34.50 3.46
235 240 7.386848 GCATATGTACACCCTATTGTATTTCGT 59.613 37.037 0.00 0.00 34.50 3.85
236 241 9.917129 CATATGTACACCCTATTGTATTTCGTA 57.083 33.333 0.00 0.00 34.50 3.43
239 244 8.009622 TGTACACCCTATTGTATTTCGTATCA 57.990 34.615 0.00 0.00 34.50 2.15
240 245 8.476447 TGTACACCCTATTGTATTTCGTATCAA 58.524 33.333 0.00 0.00 34.50 2.57
241 246 7.781548 ACACCCTATTGTATTTCGTATCAAC 57.218 36.000 0.00 0.00 0.00 3.18
242 247 7.562135 ACACCCTATTGTATTTCGTATCAACT 58.438 34.615 0.00 0.00 0.00 3.16
243 248 7.709613 ACACCCTATTGTATTTCGTATCAACTC 59.290 37.037 0.00 0.00 0.00 3.01
244 249 7.170998 CACCCTATTGTATTTCGTATCAACTCC 59.829 40.741 0.00 0.00 0.00 3.85
245 250 7.070821 ACCCTATTGTATTTCGTATCAACTCCT 59.929 37.037 0.00 0.00 0.00 3.69
246 251 8.582437 CCCTATTGTATTTCGTATCAACTCCTA 58.418 37.037 0.00 0.00 0.00 2.94
256 261 9.914131 TTTCGTATCAACTCCTATATTCATGAG 57.086 33.333 0.00 0.00 0.00 2.90
257 262 8.637196 TCGTATCAACTCCTATATTCATGAGT 57.363 34.615 0.00 0.00 39.66 3.41
258 263 9.734984 TCGTATCAACTCCTATATTCATGAGTA 57.265 33.333 0.00 0.00 37.09 2.59
259 264 9.995957 CGTATCAACTCCTATATTCATGAGTAG 57.004 37.037 4.16 4.87 37.09 2.57
263 268 9.201989 TCAACTCCTATATTCATGAGTAGTTGT 57.798 33.333 20.95 12.04 41.12 3.32
264 269 9.823647 CAACTCCTATATTCATGAGTAGTTGTT 57.176 33.333 16.71 13.21 37.09 2.83
265 270 9.823647 AACTCCTATATTCATGAGTAGTTGTTG 57.176 33.333 4.16 0.00 37.09 3.33
266 271 8.982723 ACTCCTATATTCATGAGTAGTTGTTGT 58.017 33.333 4.16 0.00 36.36 3.32
267 272 9.254133 CTCCTATATTCATGAGTAGTTGTTGTG 57.746 37.037 4.16 0.00 0.00 3.33
268 273 8.977412 TCCTATATTCATGAGTAGTTGTTGTGA 58.023 33.333 4.16 0.00 0.00 3.58
269 274 9.770097 CCTATATTCATGAGTAGTTGTTGTGAT 57.230 33.333 4.16 0.00 0.00 3.06
272 277 6.785488 TTCATGAGTAGTTGTTGTGATGTC 57.215 37.500 0.00 0.00 0.00 3.06
273 278 5.237815 TCATGAGTAGTTGTTGTGATGTCC 58.762 41.667 0.00 0.00 0.00 4.02
274 279 4.681074 TGAGTAGTTGTTGTGATGTCCA 57.319 40.909 0.00 0.00 0.00 4.02
275 280 4.377021 TGAGTAGTTGTTGTGATGTCCAC 58.623 43.478 0.00 0.00 45.88 4.02
276 281 4.100963 TGAGTAGTTGTTGTGATGTCCACT 59.899 41.667 0.00 0.00 45.86 4.00
277 282 5.036117 AGTAGTTGTTGTGATGTCCACTT 57.964 39.130 0.00 0.00 45.86 3.16
278 283 5.437060 AGTAGTTGTTGTGATGTCCACTTT 58.563 37.500 0.00 0.00 45.86 2.66
279 284 4.637483 AGTTGTTGTGATGTCCACTTTG 57.363 40.909 0.00 0.00 45.86 2.77
280 285 4.016444 AGTTGTTGTGATGTCCACTTTGT 58.984 39.130 0.00 0.00 45.86 2.83
281 286 4.462483 AGTTGTTGTGATGTCCACTTTGTT 59.538 37.500 0.00 0.00 45.86 2.83
282 287 5.650266 AGTTGTTGTGATGTCCACTTTGTTA 59.350 36.000 0.00 0.00 45.86 2.41
283 288 5.493133 TGTTGTGATGTCCACTTTGTTAC 57.507 39.130 0.00 0.00 45.86 2.50
284 289 4.336993 TGTTGTGATGTCCACTTTGTTACC 59.663 41.667 0.00 0.00 45.86 2.85
285 290 4.157849 TGTGATGTCCACTTTGTTACCA 57.842 40.909 0.00 0.00 45.86 3.25
286 291 4.133820 TGTGATGTCCACTTTGTTACCAG 58.866 43.478 0.00 0.00 45.86 4.00
287 292 4.134563 GTGATGTCCACTTTGTTACCAGT 58.865 43.478 0.00 0.00 42.44 4.00
288 293 5.163290 TGTGATGTCCACTTTGTTACCAGTA 60.163 40.000 0.00 0.00 45.86 2.74
289 294 5.938125 GTGATGTCCACTTTGTTACCAGTAT 59.062 40.000 0.00 0.00 42.44 2.12
290 295 7.101054 GTGATGTCCACTTTGTTACCAGTATA 58.899 38.462 0.00 0.00 42.44 1.47
291 296 7.769044 GTGATGTCCACTTTGTTACCAGTATAT 59.231 37.037 0.00 0.00 42.44 0.86
292 297 7.768582 TGATGTCCACTTTGTTACCAGTATATG 59.231 37.037 0.00 0.00 0.00 1.78
293 298 7.247456 TGTCCACTTTGTTACCAGTATATGA 57.753 36.000 0.00 0.00 0.00 2.15
294 299 7.101054 TGTCCACTTTGTTACCAGTATATGAC 58.899 38.462 0.00 0.00 0.00 3.06
295 300 6.537660 GTCCACTTTGTTACCAGTATATGACC 59.462 42.308 0.00 0.00 0.00 4.02
296 301 6.442564 TCCACTTTGTTACCAGTATATGACCT 59.557 38.462 0.00 0.00 0.00 3.85
297 302 7.037873 TCCACTTTGTTACCAGTATATGACCTT 60.038 37.037 0.00 0.00 0.00 3.50
298 303 8.262227 CCACTTTGTTACCAGTATATGACCTTA 58.738 37.037 0.00 0.00 0.00 2.69
299 304 9.095065 CACTTTGTTACCAGTATATGACCTTAC 57.905 37.037 0.00 0.00 0.00 2.34
300 305 7.977853 ACTTTGTTACCAGTATATGACCTTACG 59.022 37.037 0.00 0.00 0.00 3.18
301 306 7.408756 TTGTTACCAGTATATGACCTTACGT 57.591 36.000 0.00 0.00 0.00 3.57
302 307 6.798482 TGTTACCAGTATATGACCTTACGTG 58.202 40.000 0.00 0.00 0.00 4.49
303 308 6.377996 TGTTACCAGTATATGACCTTACGTGT 59.622 38.462 0.00 0.00 0.00 4.49
304 309 7.555914 TGTTACCAGTATATGACCTTACGTGTA 59.444 37.037 0.00 0.00 0.00 2.90
305 310 8.571336 GTTACCAGTATATGACCTTACGTGTAT 58.429 37.037 0.00 0.00 0.00 2.29
306 311 6.978338 ACCAGTATATGACCTTACGTGTATG 58.022 40.000 0.00 0.00 0.00 2.39
307 312 6.548622 ACCAGTATATGACCTTACGTGTATGT 59.451 38.462 0.00 0.00 0.00 2.29
308 313 7.069085 ACCAGTATATGACCTTACGTGTATGTT 59.931 37.037 0.00 0.00 0.00 2.71
309 314 8.570488 CCAGTATATGACCTTACGTGTATGTTA 58.430 37.037 0.00 0.00 0.00 2.41
314 319 7.766219 ATGACCTTACGTGTATGTTATTGTC 57.234 36.000 0.00 0.00 0.00 3.18
315 320 6.689554 TGACCTTACGTGTATGTTATTGTCA 58.310 36.000 0.00 0.00 0.00 3.58
316 321 7.324935 TGACCTTACGTGTATGTTATTGTCAT 58.675 34.615 0.00 0.00 0.00 3.06
317 322 7.276878 TGACCTTACGTGTATGTTATTGTCATG 59.723 37.037 0.00 0.00 0.00 3.07
318 323 7.101054 ACCTTACGTGTATGTTATTGTCATGT 58.899 34.615 0.00 0.00 33.69 3.21
319 324 7.064134 ACCTTACGTGTATGTTATTGTCATGTG 59.936 37.037 0.00 0.00 31.94 3.21
320 325 7.064134 CCTTACGTGTATGTTATTGTCATGTGT 59.936 37.037 0.00 0.00 31.94 3.72
321 326 6.795098 ACGTGTATGTTATTGTCATGTGTT 57.205 33.333 0.00 0.00 0.00 3.32
322 327 6.598525 ACGTGTATGTTATTGTCATGTGTTG 58.401 36.000 0.00 0.00 0.00 3.33
323 328 6.020984 CGTGTATGTTATTGTCATGTGTTGG 58.979 40.000 0.00 0.00 0.00 3.77
324 329 6.321717 GTGTATGTTATTGTCATGTGTTGGG 58.678 40.000 0.00 0.00 0.00 4.12
325 330 5.417266 TGTATGTTATTGTCATGTGTTGGGG 59.583 40.000 0.00 0.00 0.00 4.96
326 331 2.560542 TGTTATTGTCATGTGTTGGGGC 59.439 45.455 0.00 0.00 0.00 5.80
327 332 1.458398 TATTGTCATGTGTTGGGGCG 58.542 50.000 0.00 0.00 0.00 6.13
328 333 0.251121 ATTGTCATGTGTTGGGGCGA 60.251 50.000 0.00 0.00 0.00 5.54
329 334 1.169661 TTGTCATGTGTTGGGGCGAC 61.170 55.000 0.00 0.00 0.00 5.19
330 335 1.302511 GTCATGTGTTGGGGCGACT 60.303 57.895 0.00 0.00 0.00 4.18
331 336 0.036765 GTCATGTGTTGGGGCGACTA 60.037 55.000 0.00 0.00 0.00 2.59
332 337 0.687920 TCATGTGTTGGGGCGACTAA 59.312 50.000 0.00 0.00 0.00 2.24
333 338 1.072489 TCATGTGTTGGGGCGACTAAA 59.928 47.619 0.00 0.00 0.00 1.85
334 339 1.468520 CATGTGTTGGGGCGACTAAAG 59.531 52.381 0.00 0.00 0.00 1.85
335 340 0.759959 TGTGTTGGGGCGACTAAAGA 59.240 50.000 0.00 0.00 0.00 2.52
336 341 1.349688 TGTGTTGGGGCGACTAAAGAT 59.650 47.619 0.00 0.00 0.00 2.40
337 342 1.737793 GTGTTGGGGCGACTAAAGATG 59.262 52.381 0.00 0.00 0.00 2.90
338 343 0.733150 GTTGGGGCGACTAAAGATGC 59.267 55.000 0.00 0.00 0.00 3.91
339 344 0.742990 TTGGGGCGACTAAAGATGCG 60.743 55.000 0.00 0.00 0.00 4.73
340 345 1.153429 GGGGCGACTAAAGATGCGT 60.153 57.895 0.00 0.00 0.00 5.24
341 346 0.743345 GGGGCGACTAAAGATGCGTT 60.743 55.000 0.00 0.00 0.00 4.84
342 347 1.084289 GGGCGACTAAAGATGCGTTT 58.916 50.000 0.00 0.00 0.00 3.60
343 348 1.062148 GGGCGACTAAAGATGCGTTTC 59.938 52.381 0.00 0.00 0.00 2.78
344 349 2.000447 GGCGACTAAAGATGCGTTTCT 59.000 47.619 0.00 0.00 0.00 2.52
345 350 3.184541 GGCGACTAAAGATGCGTTTCTA 58.815 45.455 0.00 0.00 0.00 2.10
346 351 3.802685 GGCGACTAAAGATGCGTTTCTAT 59.197 43.478 0.00 0.00 0.00 1.98
347 352 4.085004 GGCGACTAAAGATGCGTTTCTATC 60.085 45.833 0.00 0.00 0.00 2.08
348 353 4.503007 GCGACTAAAGATGCGTTTCTATCA 59.497 41.667 0.00 0.00 0.00 2.15
349 354 5.175856 GCGACTAAAGATGCGTTTCTATCAT 59.824 40.000 0.00 0.00 0.00 2.45
350 355 6.292381 GCGACTAAAGATGCGTTTCTATCATT 60.292 38.462 0.00 0.00 0.00 2.57
351 356 7.096189 GCGACTAAAGATGCGTTTCTATCATTA 60.096 37.037 0.00 0.00 0.00 1.90
352 357 8.420945 CGACTAAAGATGCGTTTCTATCATTAG 58.579 37.037 0.00 0.00 39.05 1.73
353 358 8.077836 ACTAAAGATGCGTTTCTATCATTAGC 57.922 34.615 0.00 0.00 37.77 3.09
354 359 5.582439 AAGATGCGTTTCTATCATTAGCG 57.418 39.130 0.00 0.00 0.00 4.26
355 360 4.871513 AGATGCGTTTCTATCATTAGCGA 58.128 39.130 0.00 0.00 0.00 4.93
356 361 4.920340 AGATGCGTTTCTATCATTAGCGAG 59.080 41.667 0.00 0.00 0.00 5.03
357 362 3.381045 TGCGTTTCTATCATTAGCGAGG 58.619 45.455 0.00 0.00 0.00 4.63
358 363 3.067601 TGCGTTTCTATCATTAGCGAGGA 59.932 43.478 0.00 0.00 0.00 3.71
359 364 4.238514 GCGTTTCTATCATTAGCGAGGAT 58.761 43.478 0.00 0.00 0.00 3.24
360 365 4.686554 GCGTTTCTATCATTAGCGAGGATT 59.313 41.667 0.00 0.00 0.00 3.01
361 366 5.388890 GCGTTTCTATCATTAGCGAGGATTG 60.389 44.000 0.00 0.00 0.00 2.67
381 386 2.877043 CAAAGTCTTTGCTGTGGCTT 57.123 45.000 12.26 0.00 39.59 4.35
382 387 2.466846 CAAAGTCTTTGCTGTGGCTTG 58.533 47.619 12.26 0.00 39.59 4.01
383 388 1.035139 AAGTCTTTGCTGTGGCTTGG 58.965 50.000 0.00 0.00 39.59 3.61
384 389 0.183492 AGTCTTTGCTGTGGCTTGGA 59.817 50.000 0.00 0.00 39.59 3.53
385 390 0.312102 GTCTTTGCTGTGGCTTGGAC 59.688 55.000 0.00 0.00 39.59 4.02
386 391 0.823356 TCTTTGCTGTGGCTTGGACC 60.823 55.000 0.00 0.00 39.59 4.46
387 392 2.133742 CTTTGCTGTGGCTTGGACCG 62.134 60.000 0.00 0.00 39.59 4.79
391 396 2.672651 TGTGGCTTGGACCGCATG 60.673 61.111 0.00 0.00 45.14 4.06
392 397 2.672996 GTGGCTTGGACCGCATGT 60.673 61.111 0.00 0.00 40.11 3.21
393 398 2.115052 TGGCTTGGACCGCATGTT 59.885 55.556 0.00 0.00 0.00 2.71
394 399 2.267351 TGGCTTGGACCGCATGTTG 61.267 57.895 0.00 0.00 0.00 3.33
395 400 2.568090 GCTTGGACCGCATGTTGG 59.432 61.111 4.76 4.76 0.00 3.77
396 401 2.993471 GCTTGGACCGCATGTTGGG 61.993 63.158 10.36 4.84 0.00 4.12
397 402 1.603455 CTTGGACCGCATGTTGGGT 60.603 57.895 10.36 7.82 39.83 4.51
398 403 1.865788 CTTGGACCGCATGTTGGGTG 61.866 60.000 9.51 0.00 36.46 4.61
399 404 2.282180 GGACCGCATGTTGGGTGT 60.282 61.111 9.51 0.00 36.46 4.16
400 405 1.901464 GGACCGCATGTTGGGTGTT 60.901 57.895 9.51 0.00 36.46 3.32
401 406 0.606944 GGACCGCATGTTGGGTGTTA 60.607 55.000 9.51 0.00 36.46 2.41
402 407 0.519961 GACCGCATGTTGGGTGTTAC 59.480 55.000 9.51 0.00 36.46 2.50
403 408 0.179015 ACCGCATGTTGGGTGTTACA 60.179 50.000 10.36 0.00 34.58 2.41
404 409 0.239879 CCGCATGTTGGGTGTTACAC 59.760 55.000 6.99 6.99 0.00 2.90
422 427 2.555782 CACGTCGTGGGCATGTTG 59.444 61.111 17.75 0.00 0.00 3.33
423 428 3.353836 ACGTCGTGGGCATGTTGC 61.354 61.111 0.00 0.00 44.08 4.17
424 429 3.049674 CGTCGTGGGCATGTTGCT 61.050 61.111 0.00 0.00 44.28 3.91
425 430 2.562912 GTCGTGGGCATGTTGCTG 59.437 61.111 0.00 0.00 44.28 4.41
426 431 3.364441 TCGTGGGCATGTTGCTGC 61.364 61.111 0.00 0.00 44.28 5.25
427 432 3.672447 CGTGGGCATGTTGCTGCA 61.672 61.111 0.00 0.00 44.28 4.41
428 433 2.735883 GTGGGCATGTTGCTGCAA 59.264 55.556 11.69 11.69 44.28 4.08
429 434 1.665599 GTGGGCATGTTGCTGCAAC 60.666 57.895 32.58 32.58 44.28 4.17
440 445 3.244976 GTTGCTGCAACACATAATCACC 58.755 45.455 33.76 7.89 43.09 4.02
441 446 1.468127 TGCTGCAACACATAATCACCG 59.532 47.619 0.00 0.00 0.00 4.94
442 447 1.468520 GCTGCAACACATAATCACCGT 59.531 47.619 0.00 0.00 0.00 4.83
443 448 2.476185 GCTGCAACACATAATCACCGTC 60.476 50.000 0.00 0.00 0.00 4.79
444 449 2.741517 CTGCAACACATAATCACCGTCA 59.258 45.455 0.00 0.00 0.00 4.35
445 450 3.342719 TGCAACACATAATCACCGTCAT 58.657 40.909 0.00 0.00 0.00 3.06
446 451 3.373748 TGCAACACATAATCACCGTCATC 59.626 43.478 0.00 0.00 0.00 2.92
447 452 3.544048 GCAACACATAATCACCGTCATCG 60.544 47.826 0.00 0.00 0.00 3.84
448 453 3.520290 ACACATAATCACCGTCATCGT 57.480 42.857 0.00 0.00 35.01 3.73
449 454 3.186909 ACACATAATCACCGTCATCGTG 58.813 45.455 0.00 0.00 35.01 4.35
450 455 2.539688 CACATAATCACCGTCATCGTGG 59.460 50.000 0.00 0.00 35.01 4.94
451 456 2.167693 ACATAATCACCGTCATCGTGGT 59.832 45.455 0.00 0.00 39.66 4.16
452 457 3.382227 ACATAATCACCGTCATCGTGGTA 59.618 43.478 0.00 0.00 36.50 3.25
453 458 2.579207 AATCACCGTCATCGTGGTAG 57.421 50.000 0.00 0.00 36.50 3.18
454 459 1.758936 ATCACCGTCATCGTGGTAGA 58.241 50.000 0.00 0.00 36.50 2.59
455 460 1.092348 TCACCGTCATCGTGGTAGAG 58.908 55.000 0.00 0.00 36.50 2.43
456 461 0.100682 CACCGTCATCGTGGTAGAGG 59.899 60.000 0.00 0.00 36.50 3.69
457 462 0.323178 ACCGTCATCGTGGTAGAGGT 60.323 55.000 0.00 0.00 36.50 3.85
458 463 0.815734 CCGTCATCGTGGTAGAGGTT 59.184 55.000 0.00 0.00 35.01 3.50
459 464 1.202268 CCGTCATCGTGGTAGAGGTTC 60.202 57.143 0.00 0.00 35.01 3.62
460 465 1.743958 CGTCATCGTGGTAGAGGTTCT 59.256 52.381 0.00 0.00 0.00 3.01
461 466 2.163815 CGTCATCGTGGTAGAGGTTCTT 59.836 50.000 0.00 0.00 0.00 2.52
462 467 3.512680 GTCATCGTGGTAGAGGTTCTTG 58.487 50.000 0.00 0.00 0.00 3.02
463 468 2.094182 TCATCGTGGTAGAGGTTCTTGC 60.094 50.000 0.00 0.00 0.00 4.01
464 469 0.606604 TCGTGGTAGAGGTTCTTGCC 59.393 55.000 0.00 0.00 0.00 4.52
465 470 0.736325 CGTGGTAGAGGTTCTTGCCG 60.736 60.000 0.00 0.00 0.00 5.69
466 471 1.019805 GTGGTAGAGGTTCTTGCCGC 61.020 60.000 0.00 0.00 0.00 6.53
467 472 1.192146 TGGTAGAGGTTCTTGCCGCT 61.192 55.000 0.00 0.00 41.50 5.52
468 473 0.741221 GGTAGAGGTTCTTGCCGCTG 60.741 60.000 0.00 0.00 39.05 5.18
469 474 0.741221 GTAGAGGTTCTTGCCGCTGG 60.741 60.000 0.00 0.00 39.05 4.85
470 475 0.902984 TAGAGGTTCTTGCCGCTGGA 60.903 55.000 0.00 0.00 39.05 3.86
471 476 2.032681 AGGTTCTTGCCGCTGGAC 59.967 61.111 0.00 0.00 0.00 4.02
472 477 2.032681 GGTTCTTGCCGCTGGACT 59.967 61.111 0.00 0.00 0.00 3.85
473 478 2.035442 GGTTCTTGCCGCTGGACTC 61.035 63.158 0.00 0.00 0.00 3.36
474 479 2.035442 GTTCTTGCCGCTGGACTCC 61.035 63.158 0.00 0.00 0.00 3.85
475 480 2.217038 TTCTTGCCGCTGGACTCCT 61.217 57.895 0.00 0.00 0.00 3.69
476 481 2.125350 CTTGCCGCTGGACTCCTC 60.125 66.667 0.00 0.00 0.00 3.71
477 482 3.997064 CTTGCCGCTGGACTCCTCG 62.997 68.421 0.00 0.35 0.00 4.63
479 484 4.500116 GCCGCTGGACTCCTCGTC 62.500 72.222 0.00 0.00 42.07 4.20
480 485 4.180946 CCGCTGGACTCCTCGTCG 62.181 72.222 0.00 0.00 43.79 5.12
481 486 4.180946 CGCTGGACTCCTCGTCGG 62.181 72.222 0.00 0.00 43.79 4.79
482 487 4.500116 GCTGGACTCCTCGTCGGC 62.500 72.222 0.00 0.00 43.79 5.54
483 488 4.180946 CTGGACTCCTCGTCGGCG 62.181 72.222 1.15 1.15 43.79 6.46
485 490 3.745803 GGACTCCTCGTCGGCGTT 61.746 66.667 10.18 0.00 43.79 4.84
486 491 2.504244 GACTCCTCGTCGGCGTTG 60.504 66.667 10.18 3.51 39.49 4.10
487 492 3.966026 GACTCCTCGTCGGCGTTGG 62.966 68.421 10.18 13.59 39.49 3.77
488 493 4.796231 CTCCTCGTCGGCGTTGGG 62.796 72.222 19.88 15.65 39.49 4.12
490 495 4.143333 CCTCGTCGGCGTTGGGAT 62.143 66.667 10.18 0.00 39.49 3.85
491 496 2.582498 CTCGTCGGCGTTGGGATC 60.582 66.667 10.18 0.00 39.49 3.36
492 497 4.485834 TCGTCGGCGTTGGGATCG 62.486 66.667 10.18 2.37 39.49 3.69
499 504 3.499737 CGTTGGGATCGCTGTGGC 61.500 66.667 11.46 0.00 0.00 5.01
500 505 2.045926 GTTGGGATCGCTGTGGCT 60.046 61.111 11.46 0.00 36.09 4.75
501 506 1.675641 GTTGGGATCGCTGTGGCTT 60.676 57.895 11.46 0.00 36.09 4.35
502 507 1.074775 TTGGGATCGCTGTGGCTTT 59.925 52.632 11.46 0.00 36.09 3.51
503 508 0.539438 TTGGGATCGCTGTGGCTTTT 60.539 50.000 11.46 0.00 36.09 2.27
504 509 1.243342 TGGGATCGCTGTGGCTTTTG 61.243 55.000 11.46 0.00 36.09 2.44
505 510 1.244019 GGGATCGCTGTGGCTTTTGT 61.244 55.000 1.84 0.00 36.09 2.83
506 511 0.598065 GGATCGCTGTGGCTTTTGTT 59.402 50.000 0.00 0.00 36.09 2.83
507 512 1.666888 GGATCGCTGTGGCTTTTGTTG 60.667 52.381 0.00 0.00 36.09 3.33
508 513 1.001378 GATCGCTGTGGCTTTTGTTGT 60.001 47.619 0.00 0.00 36.09 3.32
509 514 0.380378 TCGCTGTGGCTTTTGTTGTC 59.620 50.000 0.00 0.00 36.09 3.18
510 515 0.100325 CGCTGTGGCTTTTGTTGTCA 59.900 50.000 0.00 0.00 36.09 3.58
511 516 1.269206 CGCTGTGGCTTTTGTTGTCAT 60.269 47.619 0.00 0.00 36.09 3.06
512 517 2.799207 CGCTGTGGCTTTTGTTGTCATT 60.799 45.455 0.00 0.00 36.09 2.57
513 518 2.540931 GCTGTGGCTTTTGTTGTCATTG 59.459 45.455 0.00 0.00 35.22 2.82
514 519 3.784338 CTGTGGCTTTTGTTGTCATTGT 58.216 40.909 0.00 0.00 0.00 2.71
515 520 3.779759 TGTGGCTTTTGTTGTCATTGTC 58.220 40.909 0.00 0.00 0.00 3.18
516 521 2.788786 GTGGCTTTTGTTGTCATTGTCG 59.211 45.455 0.00 0.00 0.00 4.35
517 522 2.425312 TGGCTTTTGTTGTCATTGTCGT 59.575 40.909 0.00 0.00 0.00 4.34
518 523 3.042887 GGCTTTTGTTGTCATTGTCGTC 58.957 45.455 0.00 0.00 0.00 4.20
519 524 3.042887 GCTTTTGTTGTCATTGTCGTCC 58.957 45.455 0.00 0.00 0.00 4.79
520 525 3.628017 CTTTTGTTGTCATTGTCGTCCC 58.372 45.455 0.00 0.00 0.00 4.46
521 526 1.600023 TTGTTGTCATTGTCGTCCCC 58.400 50.000 0.00 0.00 0.00 4.81
522 527 0.470341 TGTTGTCATTGTCGTCCCCA 59.530 50.000 0.00 0.00 0.00 4.96
523 528 1.156736 GTTGTCATTGTCGTCCCCAG 58.843 55.000 0.00 0.00 0.00 4.45
524 529 1.052617 TTGTCATTGTCGTCCCCAGA 58.947 50.000 0.00 0.00 0.00 3.86
525 530 1.052617 TGTCATTGTCGTCCCCAGAA 58.947 50.000 0.00 0.00 0.00 3.02
526 531 1.270625 TGTCATTGTCGTCCCCAGAAC 60.271 52.381 0.00 0.00 0.00 3.01
527 532 1.002087 GTCATTGTCGTCCCCAGAACT 59.998 52.381 0.00 0.00 0.00 3.01
528 533 2.232941 GTCATTGTCGTCCCCAGAACTA 59.767 50.000 0.00 0.00 0.00 2.24
529 534 3.104512 TCATTGTCGTCCCCAGAACTAT 58.895 45.455 0.00 0.00 0.00 2.12
530 535 3.132289 TCATTGTCGTCCCCAGAACTATC 59.868 47.826 0.00 0.00 0.00 2.08
531 536 2.526888 TGTCGTCCCCAGAACTATCT 57.473 50.000 0.00 0.00 35.88 1.98
532 537 3.657398 TGTCGTCCCCAGAACTATCTA 57.343 47.619 0.00 0.00 33.50 1.98
533 538 3.552875 TGTCGTCCCCAGAACTATCTAG 58.447 50.000 0.00 0.00 33.50 2.43
534 539 3.201487 TGTCGTCCCCAGAACTATCTAGA 59.799 47.826 0.00 0.00 33.50 2.43
535 540 3.816523 GTCGTCCCCAGAACTATCTAGAG 59.183 52.174 0.00 0.00 33.50 2.43
536 541 3.150767 CGTCCCCAGAACTATCTAGAGG 58.849 54.545 0.00 0.00 33.50 3.69
537 542 3.181442 CGTCCCCAGAACTATCTAGAGGA 60.181 52.174 0.00 0.00 33.50 3.71
538 543 4.507691 CGTCCCCAGAACTATCTAGAGGAT 60.508 50.000 0.00 0.00 38.38 3.24
539 544 4.770010 GTCCCCAGAACTATCTAGAGGATG 59.230 50.000 0.00 0.00 35.98 3.51
540 545 4.093011 CCCCAGAACTATCTAGAGGATGG 58.907 52.174 0.00 0.85 38.63 3.51
541 546 4.093011 CCCAGAACTATCTAGAGGATGGG 58.907 52.174 11.57 11.57 37.26 4.00
542 547 3.513515 CCAGAACTATCTAGAGGATGGGC 59.486 52.174 0.00 0.00 37.26 5.36
543 548 4.415596 CAGAACTATCTAGAGGATGGGCT 58.584 47.826 0.00 0.00 37.26 5.19
544 549 4.220382 CAGAACTATCTAGAGGATGGGCTG 59.780 50.000 0.00 0.00 37.26 4.85
545 550 2.534990 ACTATCTAGAGGATGGGCTGC 58.465 52.381 0.00 0.00 37.26 5.25
558 563 1.153249 GGCTGCCTGGCGTACATTA 60.153 57.895 14.98 0.00 0.00 1.90
655 660 3.914426 ATGGGCTAGAAGACACGAAAT 57.086 42.857 0.00 0.00 0.00 2.17
729 734 6.737720 TTGTATGAGGTGATCAATAGAGCT 57.262 37.500 0.00 0.00 42.53 4.09
804 809 5.820947 GCCCGAGGAAGAAATATCTGTTTTA 59.179 40.000 0.00 0.00 35.59 1.52
865 870 5.560724 CTTGGTATTTATGGTGGGATCGAT 58.439 41.667 0.00 0.00 0.00 3.59
874 879 2.835156 TGGTGGGATCGATGTAAACTGA 59.165 45.455 0.54 0.00 0.00 3.41
921 926 1.734655 ATCAATCTACGATGGGGGCT 58.265 50.000 0.00 0.00 0.00 5.19
957 962 6.586082 CGGCAAATTATGTTAAAGCAAACTCT 59.414 34.615 0.00 0.00 0.00 3.24
992 997 3.856206 AGTAAGAAAGGGGGATGGCTTAA 59.144 43.478 0.00 0.00 0.00 1.85
1025 1030 3.794564 GGTTTTGTGAAGCTAAACGTTGG 59.205 43.478 0.00 0.00 41.48 3.77
1062 1068 1.617018 ATCTGCTTAGAGGCACGGCA 61.617 55.000 0.00 0.00 37.29 5.69
1066 1072 3.391665 CTTAGAGGCACGGCAGGGG 62.392 68.421 0.00 0.00 0.00 4.79
1099 1105 8.156820 TGAGAGATGACAAAGGAAAGTTCATTA 58.843 33.333 0.00 0.00 30.13 1.90
1130 1136 1.227556 GGCGACTTGACTGGTGTGT 60.228 57.895 0.00 0.00 0.00 3.72
1219 1225 4.632688 GCAACCGCCTTATTGTTAACTCTA 59.367 41.667 7.22 0.00 0.00 2.43
1223 1229 8.333186 CAACCGCCTTATTGTTAACTCTAATAC 58.667 37.037 7.22 0.37 0.00 1.89
1312 1318 6.262944 TCGATGATTGCTATTTTATGGCTTGT 59.737 34.615 0.00 0.00 37.67 3.16
1404 1414 1.746220 AGCGAGTTTCTCTGCGACTAT 59.254 47.619 0.00 0.00 36.04 2.12
1514 1962 6.575244 TTTCAGAAAATAGAGGATGGGCTA 57.425 37.500 0.00 0.00 0.00 3.93
1521 1969 3.164269 AGGATGGGCTACCTGGCG 61.164 66.667 0.00 0.00 42.84 5.69
1528 1976 4.460873 GCTACCTGGCGCGTTTGC 62.461 66.667 8.43 0.00 37.91 3.68
1584 2032 1.376424 ATGCCAACTCCTGCGTCTG 60.376 57.895 0.00 0.00 0.00 3.51
1642 2090 0.834612 TCGACCAGGAACACCAGTTT 59.165 50.000 0.00 0.00 38.30 2.66
1662 2110 1.886777 GCCAGCATCCGAGAAGAGC 60.887 63.158 0.00 0.00 0.00 4.09
1677 2125 3.133721 AGAAGAGCGGTTAGATTGAGCAT 59.866 43.478 0.00 0.00 0.00 3.79
1681 2129 2.432146 AGCGGTTAGATTGAGCATCTCA 59.568 45.455 0.00 0.00 41.80 3.27
1682 2130 2.799412 GCGGTTAGATTGAGCATCTCAG 59.201 50.000 0.00 0.00 41.80 3.35
1687 2135 7.095910 CGGTTAGATTGAGCATCTCAGATTAT 58.904 38.462 0.00 0.00 41.80 1.28
1688 2136 7.275341 CGGTTAGATTGAGCATCTCAGATTATC 59.725 40.741 0.00 0.00 41.80 1.75
1694 2142 4.342092 TGAGCATCTCAGATTATCCAACGA 59.658 41.667 0.00 0.00 35.39 3.85
1741 2190 2.108250 ACTTGTGCTATGGGTTGGTCTT 59.892 45.455 0.00 0.00 0.00 3.01
1768 2217 0.179029 CCGGAGTCCACCTTGTTGTT 60.179 55.000 10.49 0.00 0.00 2.83
1883 2333 4.336433 CGTCATCCTTGCCATTTAACATCT 59.664 41.667 0.00 0.00 0.00 2.90
1886 2336 5.827797 TCATCCTTGCCATTTAACATCTACC 59.172 40.000 0.00 0.00 0.00 3.18
1887 2337 5.186256 TCCTTGCCATTTAACATCTACCA 57.814 39.130 0.00 0.00 0.00 3.25
1890 2340 2.680841 TGCCATTTAACATCTACCACGC 59.319 45.455 0.00 0.00 0.00 5.34
1910 2395 2.046892 AGAGCCACGTGCATGACC 60.047 61.111 14.17 0.00 44.83 4.02
1911 2396 3.127533 GAGCCACGTGCATGACCC 61.128 66.667 14.17 0.00 44.83 4.46
1914 2399 2.815211 CCACGTGCATGACCCGAG 60.815 66.667 14.17 0.00 0.00 4.63
1915 2400 2.815211 CACGTGCATGACCCGAGG 60.815 66.667 14.17 0.00 0.00 4.63
1933 2438 1.349357 AGGAAGTGAGCCACCTTCTTC 59.651 52.381 6.76 0.00 34.49 2.87
1934 2439 1.611936 GGAAGTGAGCCACCTTCTTCC 60.612 57.143 6.52 6.52 41.03 3.46
1935 2440 1.349357 GAAGTGAGCCACCTTCTTCCT 59.651 52.381 2.18 0.00 34.49 3.36
1936 2441 0.980423 AGTGAGCCACCTTCTTCCTC 59.020 55.000 2.18 0.00 34.49 3.71
1937 2442 0.687354 GTGAGCCACCTTCTTCCTCA 59.313 55.000 0.00 0.00 0.00 3.86
1938 2443 0.979665 TGAGCCACCTTCTTCCTCAG 59.020 55.000 0.00 0.00 0.00 3.35
1939 2444 0.392327 GAGCCACCTTCTTCCTCAGC 60.392 60.000 0.00 0.00 0.00 4.26
1940 2445 0.839853 AGCCACCTTCTTCCTCAGCT 60.840 55.000 0.00 0.00 0.00 4.24
1941 2446 0.037447 GCCACCTTCTTCCTCAGCTT 59.963 55.000 0.00 0.00 0.00 3.74
1942 2447 1.818642 CCACCTTCTTCCTCAGCTTG 58.181 55.000 0.00 0.00 0.00 4.01
1943 2448 1.612726 CCACCTTCTTCCTCAGCTTGG 60.613 57.143 0.00 0.00 0.00 3.61
1944 2449 1.072965 CACCTTCTTCCTCAGCTTGGT 59.927 52.381 2.79 0.00 0.00 3.67
1945 2450 1.349357 ACCTTCTTCCTCAGCTTGGTC 59.651 52.381 2.79 0.00 0.00 4.02
1946 2451 1.349026 CCTTCTTCCTCAGCTTGGTCA 59.651 52.381 2.79 0.00 0.00 4.02
1947 2452 2.421619 CTTCTTCCTCAGCTTGGTCAC 58.578 52.381 2.79 0.00 0.00 3.67
1948 2453 0.687354 TCTTCCTCAGCTTGGTCACC 59.313 55.000 0.00 0.00 0.00 4.02
1949 2454 0.689623 CTTCCTCAGCTTGGTCACCT 59.310 55.000 0.00 0.00 0.00 4.00
1950 2455 0.687354 TTCCTCAGCTTGGTCACCTC 59.313 55.000 0.00 0.00 0.00 3.85
1951 2456 1.194781 TCCTCAGCTTGGTCACCTCC 61.195 60.000 0.00 0.00 0.00 4.30
1952 2457 1.298014 CTCAGCTTGGTCACCTCCC 59.702 63.158 0.00 0.00 0.00 4.30
1953 2458 2.046892 CAGCTTGGTCACCTCCCG 60.047 66.667 0.00 0.00 0.00 5.14
1954 2459 3.322466 AGCTTGGTCACCTCCCGG 61.322 66.667 0.00 0.00 0.00 5.73
1955 2460 3.319198 GCTTGGTCACCTCCCGGA 61.319 66.667 0.73 0.00 0.00 5.14
1956 2461 2.982130 CTTGGTCACCTCCCGGAG 59.018 66.667 0.73 7.56 0.00 4.63
1957 2462 3.316573 CTTGGTCACCTCCCGGAGC 62.317 68.421 9.17 0.00 0.00 4.70
1961 2466 4.779733 TCACCTCCCGGAGCCCTC 62.780 72.222 9.17 0.00 0.00 4.30
1970 2475 2.683933 GGAGCCCTCGACCTCCAA 60.684 66.667 14.17 0.00 45.55 3.53
1971 2476 2.066999 GGAGCCCTCGACCTCCAAT 61.067 63.158 14.17 0.00 45.55 3.16
1972 2477 0.759436 GGAGCCCTCGACCTCCAATA 60.759 60.000 14.17 0.00 45.55 1.90
1973 2478 0.676736 GAGCCCTCGACCTCCAATAG 59.323 60.000 0.00 0.00 0.00 1.73
1974 2479 0.032017 AGCCCTCGACCTCCAATAGT 60.032 55.000 0.00 0.00 0.00 2.12
1975 2480 0.831307 GCCCTCGACCTCCAATAGTT 59.169 55.000 0.00 0.00 0.00 2.24
1976 2481 1.473434 GCCCTCGACCTCCAATAGTTG 60.473 57.143 0.00 0.00 0.00 3.16
1977 2482 2.108168 CCCTCGACCTCCAATAGTTGA 58.892 52.381 0.00 0.00 0.00 3.18
1978 2483 2.101582 CCCTCGACCTCCAATAGTTGAG 59.898 54.545 0.00 0.00 42.08 3.02
1979 2484 2.761208 CCTCGACCTCCAATAGTTGAGT 59.239 50.000 6.64 0.00 41.22 3.41
1980 2485 3.195825 CCTCGACCTCCAATAGTTGAGTT 59.804 47.826 6.64 0.00 41.22 3.01
1981 2486 4.322801 CCTCGACCTCCAATAGTTGAGTTT 60.323 45.833 6.64 0.00 41.22 2.66
1982 2487 4.566004 TCGACCTCCAATAGTTGAGTTTG 58.434 43.478 0.00 0.00 0.00 2.93
1983 2488 3.684788 CGACCTCCAATAGTTGAGTTTGG 59.315 47.826 0.00 0.00 41.04 3.28
1984 2489 4.562757 CGACCTCCAATAGTTGAGTTTGGA 60.563 45.833 3.80 3.80 45.00 3.53
1985 2490 4.652822 ACCTCCAATAGTTGAGTTTGGAC 58.347 43.478 0.00 0.00 42.96 4.02
1986 2491 3.684788 CCTCCAATAGTTGAGTTTGGACG 59.315 47.826 0.00 0.00 42.96 4.79
1987 2492 3.071479 TCCAATAGTTGAGTTTGGACGC 58.929 45.455 0.00 0.00 42.96 5.19
1988 2493 2.159707 CCAATAGTTGAGTTTGGACGCG 60.160 50.000 3.53 3.53 42.02 6.01
1989 2494 1.722011 ATAGTTGAGTTTGGACGCGG 58.278 50.000 12.47 0.00 0.00 6.46
1990 2495 0.320073 TAGTTGAGTTTGGACGCGGG 60.320 55.000 12.47 0.00 0.00 6.13
1991 2496 2.281208 TTGAGTTTGGACGCGGGG 60.281 61.111 12.47 0.00 0.00 5.73
2013 2518 3.728373 GGGGGTCATGAAGGGCGT 61.728 66.667 0.00 0.00 0.00 5.68
2014 2519 2.438434 GGGGTCATGAAGGGCGTG 60.438 66.667 0.00 0.00 34.72 5.34
2015 2520 2.438434 GGGTCATGAAGGGCGTGG 60.438 66.667 0.00 0.00 34.18 4.94
2016 2521 2.668632 GGTCATGAAGGGCGTGGA 59.331 61.111 0.00 0.00 34.18 4.02
2017 2522 1.450312 GGTCATGAAGGGCGTGGAG 60.450 63.158 0.00 0.00 34.18 3.86
2018 2523 1.596934 GTCATGAAGGGCGTGGAGA 59.403 57.895 0.00 0.00 34.18 3.71
2019 2524 0.179000 GTCATGAAGGGCGTGGAGAT 59.821 55.000 0.00 0.00 34.18 2.75
2020 2525 0.465705 TCATGAAGGGCGTGGAGATC 59.534 55.000 0.00 0.00 34.18 2.75
2021 2526 0.533755 CATGAAGGGCGTGGAGATCC 60.534 60.000 0.00 0.00 0.00 3.36
2022 2527 1.700042 ATGAAGGGCGTGGAGATCCC 61.700 60.000 0.00 0.00 40.36 3.85
2025 2530 4.554036 GGGCGTGGAGATCCCTGC 62.554 72.222 0.00 0.24 37.08 4.85
2026 2531 4.554036 GGCGTGGAGATCCCTGCC 62.554 72.222 13.71 13.71 45.28 4.85
2053 2757 1.679311 GTCCTCCAGTGGCACATCA 59.321 57.895 21.41 1.10 44.52 3.07
2054 2758 0.036732 GTCCTCCAGTGGCACATCAA 59.963 55.000 21.41 1.07 44.52 2.57
2057 2761 2.173519 CCTCCAGTGGCACATCAAAAT 58.826 47.619 21.41 0.00 44.52 1.82
2074 2778 9.136323 ACATCAAAATTATAGAACCATTCCTCC 57.864 33.333 0.00 0.00 0.00 4.30
2092 2796 4.105697 TCCTCCTACCATTCTTGTTGGTTT 59.894 41.667 0.01 0.00 45.19 3.27
2104 2808 6.293004 TCTTGTTGGTTTCAATGAAGGTTT 57.707 33.333 0.00 0.00 35.10 3.27
2106 2810 6.593382 TCTTGTTGGTTTCAATGAAGGTTTTG 59.407 34.615 0.00 0.00 35.10 2.44
2109 2813 5.017294 TGGTTTCAATGAAGGTTTTGTCC 57.983 39.130 0.00 0.00 0.00 4.02
2117 2821 6.603201 TCAATGAAGGTTTTGTCCAGATATCC 59.397 38.462 0.00 0.00 0.00 2.59
2118 2822 4.513442 TGAAGGTTTTGTCCAGATATCCG 58.487 43.478 0.00 0.00 0.00 4.18
2119 2823 4.224147 TGAAGGTTTTGTCCAGATATCCGA 59.776 41.667 0.00 0.00 0.00 4.55
2131 2835 3.580458 CAGATATCCGAAACCTGGGATCT 59.420 47.826 0.00 0.00 42.01 2.75
2136 2840 1.373570 CGAAACCTGGGATCTTGCTC 58.626 55.000 0.00 0.00 0.00 4.26
2139 2843 3.359950 GAAACCTGGGATCTTGCTCATT 58.640 45.455 0.00 0.00 0.00 2.57
2144 2848 2.293677 CTGGGATCTTGCTCATTGATGC 59.706 50.000 0.00 0.00 0.00 3.91
2145 2849 2.304092 GGGATCTTGCTCATTGATGCA 58.696 47.619 0.00 0.00 37.42 3.96
2148 2852 2.203470 TCTTGCTCATTGATGCACCA 57.797 45.000 9.39 0.00 39.05 4.17
2151 2855 0.251253 TGCTCATTGATGCACCACCA 60.251 50.000 0.00 0.00 33.94 4.17
2152 2856 0.171903 GCTCATTGATGCACCACCAC 59.828 55.000 0.00 0.00 0.00 4.16
2158 2862 0.401356 TGATGCACCACCACACTCAT 59.599 50.000 0.00 0.00 0.00 2.90
2180 2884 1.267121 GTCTCAGGGCTGTTGGTCTA 58.733 55.000 0.00 0.00 0.00 2.59
2181 2885 1.205893 GTCTCAGGGCTGTTGGTCTAG 59.794 57.143 0.00 0.00 0.00 2.43
2183 2887 1.480137 CTCAGGGCTGTTGGTCTAGAG 59.520 57.143 0.00 0.00 0.00 2.43
2186 2890 0.615850 GGGCTGTTGGTCTAGAGCTT 59.384 55.000 21.80 0.00 0.00 3.74
2189 2893 2.342179 GCTGTTGGTCTAGAGCTTGAC 58.658 52.381 21.80 16.84 35.19 3.18
2220 2924 3.309582 CACCATAGCCCGAGGTGT 58.690 61.111 0.00 0.00 45.95 4.16
2222 2926 1.305802 ACCATAGCCCGAGGTGTGA 60.306 57.895 0.00 0.00 34.82 3.58
2225 2929 0.103208 CATAGCCCGAGGTGTGACTC 59.897 60.000 0.00 0.00 34.82 3.36
2227 2931 1.248785 TAGCCCGAGGTGTGACTCAC 61.249 60.000 1.86 1.86 45.47 3.51
2234 2938 2.229062 CGAGGTGTGACTCACAGTACAT 59.771 50.000 12.33 0.00 45.43 2.29
2243 2947 3.866651 ACTCACAGTACATGAATGCCTC 58.133 45.455 0.00 0.00 0.00 4.70
2250 2954 0.321919 ACATGAATGCCTCGCACACT 60.322 50.000 0.00 0.00 43.04 3.55
2264 2968 1.921573 GCACACTGTGACGAAACATGC 60.922 52.381 15.86 7.38 35.23 4.06
2287 2991 4.320714 CGATATGCAGAATGGAATTGGGTG 60.321 45.833 0.00 0.00 42.43 4.61
2298 3002 0.322816 AATTGGGTGCGAGATGCTGT 60.323 50.000 0.00 0.00 46.63 4.40
2307 3011 1.284657 CGAGATGCTGTAGTTGGCAG 58.715 55.000 0.00 0.00 41.88 4.85
2331 3035 5.564550 CCATAAATATGAAGGAGACCCCAG 58.435 45.833 1.98 0.00 35.75 4.45
2353 3057 2.450886 AGAAAGGGGTGGATTGGAAACT 59.549 45.455 0.00 0.00 0.00 2.66
2360 3064 2.437413 GTGGATTGGAAACTGGAGACC 58.563 52.381 0.00 0.00 0.00 3.85
2382 3086 1.374252 CACGAGGTGGGGAACGAAG 60.374 63.158 0.00 0.00 0.00 3.79
2388 3092 0.746923 GGTGGGGAACGAAGCATACC 60.747 60.000 0.00 0.00 0.00 2.73
2389 3093 0.746923 GTGGGGAACGAAGCATACCC 60.747 60.000 0.00 0.00 39.79 3.69
2399 3103 2.548067 CGAAGCATACCCGCTCCTTATT 60.548 50.000 0.00 0.00 42.89 1.40
2413 3117 1.453155 CTTATTGGTTGCGTGAGGCT 58.547 50.000 0.00 0.00 44.05 4.58
2417 3121 4.329545 GGTTGCGTGAGGCTGGGA 62.330 66.667 0.00 0.00 44.05 4.37
2422 3126 1.220749 GCGTGAGGCTGGGACATTA 59.779 57.895 0.00 0.00 38.20 1.90
2423 3127 0.179045 GCGTGAGGCTGGGACATTAT 60.179 55.000 0.00 0.00 38.20 1.28
2424 3128 1.586422 CGTGAGGCTGGGACATTATG 58.414 55.000 0.00 0.00 38.20 1.90
2428 3132 2.171237 TGAGGCTGGGACATTATGACAG 59.829 50.000 0.00 5.68 38.20 3.51
2447 3151 2.285368 CCAGGAGGCACCACCCTA 60.285 66.667 3.18 0.00 40.58 3.53
2451 3155 1.615424 GGAGGCACCACCCTAGGAA 60.615 63.158 11.48 0.00 40.58 3.36
2453 3157 0.919710 GAGGCACCACCCTAGGAAAT 59.080 55.000 11.48 0.00 40.58 2.17
2457 3161 1.282157 GCACCACCCTAGGAAATGAGT 59.718 52.381 11.48 0.00 0.00 3.41
2468 3172 1.298859 GAAATGAGTGCGGAGGCGTT 61.299 55.000 0.00 0.00 44.10 4.84
2472 3176 2.668550 AGTGCGGAGGCGTTTTCC 60.669 61.111 0.00 0.00 44.10 3.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 1.839994 ACCATGTCAGTGTATGAGGGG 59.160 52.381 10.40 0.00 39.07 4.79
52 53 7.011499 TCTACAGTTAATTACTTTGGCTCCA 57.989 36.000 0.00 0.00 33.85 3.86
141 146 3.055094 ACGAGTGCCCAGATAATGAAGTT 60.055 43.478 0.00 0.00 0.00 2.66
146 151 1.869754 CGGACGAGTGCCCAGATAATG 60.870 57.143 0.00 0.00 0.00 1.90
170 175 6.530181 GTCAAAACTATTTATTGCTTTCCGGG 59.470 38.462 0.00 0.00 0.00 5.73
197 202 9.860650 AGGGTGTACATATGCTAATATTCAAAA 57.139 29.630 1.58 0.00 0.00 2.44
207 212 9.938280 GAAATACAATAGGGTGTACATATGCTA 57.062 33.333 1.58 0.00 36.83 3.49
208 213 7.602644 CGAAATACAATAGGGTGTACATATGCT 59.397 37.037 1.58 0.00 36.83 3.79
209 214 7.386848 ACGAAATACAATAGGGTGTACATATGC 59.613 37.037 1.58 0.00 36.83 3.14
210 215 8.827177 ACGAAATACAATAGGGTGTACATATG 57.173 34.615 0.00 0.00 36.83 1.78
213 218 8.644216 TGATACGAAATACAATAGGGTGTACAT 58.356 33.333 0.00 0.00 36.83 2.29
214 219 8.009622 TGATACGAAATACAATAGGGTGTACA 57.990 34.615 0.00 0.00 36.83 2.90
215 220 8.758715 GTTGATACGAAATACAATAGGGTGTAC 58.241 37.037 0.00 0.00 36.83 2.90
216 221 8.698210 AGTTGATACGAAATACAATAGGGTGTA 58.302 33.333 0.00 0.00 38.32 2.90
217 222 7.562135 AGTTGATACGAAATACAATAGGGTGT 58.438 34.615 0.00 0.00 35.43 4.16
218 223 7.170998 GGAGTTGATACGAAATACAATAGGGTG 59.829 40.741 0.00 0.00 0.00 4.61
219 224 7.070821 AGGAGTTGATACGAAATACAATAGGGT 59.929 37.037 0.00 0.00 0.00 4.34
220 225 7.442656 AGGAGTTGATACGAAATACAATAGGG 58.557 38.462 0.00 0.00 0.00 3.53
230 235 9.914131 CTCATGAATATAGGAGTTGATACGAAA 57.086 33.333 0.00 0.00 0.00 3.46
231 236 9.078990 ACTCATGAATATAGGAGTTGATACGAA 57.921 33.333 0.00 0.00 37.31 3.85
232 237 8.637196 ACTCATGAATATAGGAGTTGATACGA 57.363 34.615 0.00 0.00 37.31 3.43
233 238 9.995957 CTACTCATGAATATAGGAGTTGATACG 57.004 37.037 0.00 0.00 40.76 3.06
239 244 9.823647 CAACAACTACTCATGAATATAGGAGTT 57.176 33.333 4.14 4.14 43.64 3.01
240 245 8.982723 ACAACAACTACTCATGAATATAGGAGT 58.017 33.333 0.00 0.00 42.76 3.85
241 246 9.254133 CACAACAACTACTCATGAATATAGGAG 57.746 37.037 0.00 0.00 0.00 3.69
242 247 8.977412 TCACAACAACTACTCATGAATATAGGA 58.023 33.333 0.00 0.00 0.00 2.94
243 248 9.770097 ATCACAACAACTACTCATGAATATAGG 57.230 33.333 0.00 0.00 0.00 2.57
246 251 9.102757 GACATCACAACAACTACTCATGAATAT 57.897 33.333 0.00 0.00 0.00 1.28
247 252 7.549134 GGACATCACAACAACTACTCATGAATA 59.451 37.037 0.00 0.00 0.00 1.75
248 253 6.372659 GGACATCACAACAACTACTCATGAAT 59.627 38.462 0.00 0.00 0.00 2.57
249 254 5.700832 GGACATCACAACAACTACTCATGAA 59.299 40.000 0.00 0.00 0.00 2.57
250 255 5.221621 TGGACATCACAACAACTACTCATGA 60.222 40.000 0.00 0.00 0.00 3.07
251 256 4.996758 TGGACATCACAACAACTACTCATG 59.003 41.667 0.00 0.00 0.00 3.07
252 257 4.997395 GTGGACATCACAACAACTACTCAT 59.003 41.667 0.00 0.00 45.39 2.90
253 258 4.377021 GTGGACATCACAACAACTACTCA 58.623 43.478 0.00 0.00 45.39 3.41
254 259 4.992381 GTGGACATCACAACAACTACTC 57.008 45.455 0.00 0.00 45.39 2.59
278 283 6.377996 ACACGTAAGGTCATATACTGGTAACA 59.622 38.462 0.00 0.00 46.28 2.41
279 284 6.799512 ACACGTAAGGTCATATACTGGTAAC 58.200 40.000 0.00 0.00 46.39 2.50
280 285 8.570488 CATACACGTAAGGTCATATACTGGTAA 58.430 37.037 0.00 0.00 46.39 2.85
281 286 7.720957 ACATACACGTAAGGTCATATACTGGTA 59.279 37.037 0.00 0.00 46.39 3.25
282 287 6.548622 ACATACACGTAAGGTCATATACTGGT 59.451 38.462 0.00 0.00 46.39 4.00
283 288 6.978338 ACATACACGTAAGGTCATATACTGG 58.022 40.000 0.00 0.00 46.39 4.00
288 293 9.472361 GACAATAACATACACGTAAGGTCATAT 57.528 33.333 0.00 0.00 46.39 1.78
289 294 8.468399 TGACAATAACATACACGTAAGGTCATA 58.532 33.333 0.00 0.00 46.39 2.15
290 295 7.324935 TGACAATAACATACACGTAAGGTCAT 58.675 34.615 0.00 0.00 46.39 3.06
291 296 6.689554 TGACAATAACATACACGTAAGGTCA 58.310 36.000 0.00 0.00 46.39 4.02
292 297 7.277098 ACATGACAATAACATACACGTAAGGTC 59.723 37.037 0.00 0.00 46.39 3.85
293 298 7.064134 CACATGACAATAACATACACGTAAGGT 59.936 37.037 0.00 0.00 46.39 3.50
294 299 7.064134 ACACATGACAATAACATACACGTAAGG 59.936 37.037 0.00 0.00 46.39 2.69
296 301 7.892778 ACACATGACAATAACATACACGTAA 57.107 32.000 0.00 0.00 0.00 3.18
297 302 7.148557 CCAACACATGACAATAACATACACGTA 60.149 37.037 0.00 0.00 0.00 3.57
298 303 6.348132 CCAACACATGACAATAACATACACGT 60.348 38.462 0.00 0.00 0.00 4.49
299 304 6.020984 CCAACACATGACAATAACATACACG 58.979 40.000 0.00 0.00 0.00 4.49
300 305 6.321717 CCCAACACATGACAATAACATACAC 58.678 40.000 0.00 0.00 0.00 2.90
301 306 5.417266 CCCCAACACATGACAATAACATACA 59.583 40.000 0.00 0.00 0.00 2.29
302 307 5.678616 GCCCCAACACATGACAATAACATAC 60.679 44.000 0.00 0.00 0.00 2.39
303 308 4.400884 GCCCCAACACATGACAATAACATA 59.599 41.667 0.00 0.00 0.00 2.29
304 309 3.195396 GCCCCAACACATGACAATAACAT 59.805 43.478 0.00 0.00 0.00 2.71
305 310 2.560542 GCCCCAACACATGACAATAACA 59.439 45.455 0.00 0.00 0.00 2.41
306 311 2.415357 CGCCCCAACACATGACAATAAC 60.415 50.000 0.00 0.00 0.00 1.89
307 312 1.815613 CGCCCCAACACATGACAATAA 59.184 47.619 0.00 0.00 0.00 1.40
308 313 1.003696 TCGCCCCAACACATGACAATA 59.996 47.619 0.00 0.00 0.00 1.90
309 314 0.251121 TCGCCCCAACACATGACAAT 60.251 50.000 0.00 0.00 0.00 2.71
310 315 1.149401 TCGCCCCAACACATGACAA 59.851 52.632 0.00 0.00 0.00 3.18
311 316 1.599518 GTCGCCCCAACACATGACA 60.600 57.895 0.00 0.00 0.00 3.58
312 317 0.036765 TAGTCGCCCCAACACATGAC 60.037 55.000 0.00 0.00 0.00 3.06
313 318 0.687920 TTAGTCGCCCCAACACATGA 59.312 50.000 0.00 0.00 0.00 3.07
314 319 1.468520 CTTTAGTCGCCCCAACACATG 59.531 52.381 0.00 0.00 0.00 3.21
315 320 1.349688 TCTTTAGTCGCCCCAACACAT 59.650 47.619 0.00 0.00 0.00 3.21
316 321 0.759959 TCTTTAGTCGCCCCAACACA 59.240 50.000 0.00 0.00 0.00 3.72
317 322 1.737793 CATCTTTAGTCGCCCCAACAC 59.262 52.381 0.00 0.00 0.00 3.32
318 323 1.948611 GCATCTTTAGTCGCCCCAACA 60.949 52.381 0.00 0.00 0.00 3.33
319 324 0.733150 GCATCTTTAGTCGCCCCAAC 59.267 55.000 0.00 0.00 0.00 3.77
320 325 0.742990 CGCATCTTTAGTCGCCCCAA 60.743 55.000 0.00 0.00 0.00 4.12
321 326 1.153449 CGCATCTTTAGTCGCCCCA 60.153 57.895 0.00 0.00 0.00 4.96
322 327 0.743345 AACGCATCTTTAGTCGCCCC 60.743 55.000 0.00 0.00 0.00 5.80
323 328 1.062148 GAAACGCATCTTTAGTCGCCC 59.938 52.381 0.00 0.00 0.00 6.13
324 329 2.000447 AGAAACGCATCTTTAGTCGCC 59.000 47.619 0.00 0.00 0.00 5.54
325 330 4.503007 TGATAGAAACGCATCTTTAGTCGC 59.497 41.667 0.00 0.00 0.00 5.19
326 331 6.755461 ATGATAGAAACGCATCTTTAGTCG 57.245 37.500 0.00 0.00 0.00 4.18
327 332 8.217778 GCTAATGATAGAAACGCATCTTTAGTC 58.782 37.037 13.94 7.12 39.14 2.59
328 333 7.096023 CGCTAATGATAGAAACGCATCTTTAGT 60.096 37.037 13.94 0.00 39.14 2.24
329 334 7.114953 TCGCTAATGATAGAAACGCATCTTTAG 59.885 37.037 10.54 10.54 39.52 1.85
330 335 6.921307 TCGCTAATGATAGAAACGCATCTTTA 59.079 34.615 0.00 0.00 0.00 1.85
331 336 5.753438 TCGCTAATGATAGAAACGCATCTTT 59.247 36.000 0.00 0.00 0.00 2.52
332 337 5.289595 TCGCTAATGATAGAAACGCATCTT 58.710 37.500 0.00 0.00 0.00 2.40
333 338 4.871513 TCGCTAATGATAGAAACGCATCT 58.128 39.130 0.00 0.00 0.00 2.90
334 339 4.090642 CCTCGCTAATGATAGAAACGCATC 59.909 45.833 0.00 0.00 0.00 3.91
335 340 3.990469 CCTCGCTAATGATAGAAACGCAT 59.010 43.478 0.00 0.00 0.00 4.73
336 341 3.067601 TCCTCGCTAATGATAGAAACGCA 59.932 43.478 0.00 0.00 0.00 5.24
337 342 3.639538 TCCTCGCTAATGATAGAAACGC 58.360 45.455 0.00 0.00 0.00 4.84
338 343 5.388890 GCAATCCTCGCTAATGATAGAAACG 60.389 44.000 0.00 0.00 0.00 3.60
339 344 5.466728 TGCAATCCTCGCTAATGATAGAAAC 59.533 40.000 0.00 0.00 0.00 2.78
340 345 5.610398 TGCAATCCTCGCTAATGATAGAAA 58.390 37.500 0.00 0.00 0.00 2.52
341 346 5.213891 TGCAATCCTCGCTAATGATAGAA 57.786 39.130 0.00 0.00 0.00 2.10
342 347 4.871933 TGCAATCCTCGCTAATGATAGA 57.128 40.909 0.00 0.00 0.00 1.98
343 348 5.468072 ACTTTGCAATCCTCGCTAATGATAG 59.532 40.000 0.00 0.00 0.00 2.08
344 349 5.368145 ACTTTGCAATCCTCGCTAATGATA 58.632 37.500 0.00 0.00 0.00 2.15
345 350 4.202441 ACTTTGCAATCCTCGCTAATGAT 58.798 39.130 0.00 0.00 0.00 2.45
346 351 3.609853 ACTTTGCAATCCTCGCTAATGA 58.390 40.909 0.00 0.00 0.00 2.57
347 352 3.624861 AGACTTTGCAATCCTCGCTAATG 59.375 43.478 0.00 0.00 0.00 1.90
348 353 3.878778 AGACTTTGCAATCCTCGCTAAT 58.121 40.909 0.00 0.00 0.00 1.73
349 354 3.334583 AGACTTTGCAATCCTCGCTAA 57.665 42.857 0.00 0.00 0.00 3.09
350 355 3.334583 AAGACTTTGCAATCCTCGCTA 57.665 42.857 0.00 0.00 0.00 4.26
351 356 2.191128 AAGACTTTGCAATCCTCGCT 57.809 45.000 0.00 0.00 0.00 4.93
352 357 2.589014 CAAAGACTTTGCAATCCTCGC 58.411 47.619 14.73 0.00 33.36 5.03
362 367 2.466846 CAAGCCACAGCAAAGACTTTG 58.533 47.619 21.34 21.34 43.56 2.77
363 368 1.410153 CCAAGCCACAGCAAAGACTTT 59.590 47.619 0.00 0.00 43.56 2.66
364 369 1.035139 CCAAGCCACAGCAAAGACTT 58.965 50.000 0.00 0.00 43.56 3.01
365 370 0.183492 TCCAAGCCACAGCAAAGACT 59.817 50.000 0.00 0.00 43.56 3.24
366 371 0.312102 GTCCAAGCCACAGCAAAGAC 59.688 55.000 0.00 0.00 43.56 3.01
367 372 0.823356 GGTCCAAGCCACAGCAAAGA 60.823 55.000 0.00 0.00 43.56 2.52
368 373 1.662044 GGTCCAAGCCACAGCAAAG 59.338 57.895 0.00 0.00 43.56 2.77
369 374 2.192861 CGGTCCAAGCCACAGCAAA 61.193 57.895 0.00 0.00 43.56 3.68
370 375 2.594303 CGGTCCAAGCCACAGCAA 60.594 61.111 0.00 0.00 43.56 3.91
373 378 2.360350 ATGCGGTCCAAGCCACAG 60.360 61.111 0.00 0.00 0.00 3.66
374 379 2.672651 CATGCGGTCCAAGCCACA 60.673 61.111 0.00 0.00 0.00 4.17
375 380 2.268076 AACATGCGGTCCAAGCCAC 61.268 57.895 0.00 0.00 0.00 5.01
376 381 2.115052 AACATGCGGTCCAAGCCA 59.885 55.556 0.00 0.00 0.00 4.75
377 382 2.568090 CAACATGCGGTCCAAGCC 59.432 61.111 0.00 0.00 0.00 4.35
378 383 2.568090 CCAACATGCGGTCCAAGC 59.432 61.111 0.00 0.00 0.00 4.01
379 384 1.603455 ACCCAACATGCGGTCCAAG 60.603 57.895 0.00 0.00 0.00 3.61
380 385 1.900981 CACCCAACATGCGGTCCAA 60.901 57.895 0.00 0.00 0.00 3.53
381 386 2.282110 CACCCAACATGCGGTCCA 60.282 61.111 0.00 0.00 0.00 4.02
382 387 0.606944 TAACACCCAACATGCGGTCC 60.607 55.000 0.00 0.00 0.00 4.46
383 388 0.519961 GTAACACCCAACATGCGGTC 59.480 55.000 0.00 0.00 0.00 4.79
384 389 0.179015 TGTAACACCCAACATGCGGT 60.179 50.000 0.00 0.00 0.00 5.68
385 390 0.239879 GTGTAACACCCAACATGCGG 59.760 55.000 0.00 0.00 36.32 5.69
386 391 3.765349 GTGTAACACCCAACATGCG 57.235 52.632 0.00 0.00 36.32 4.73
405 410 2.555782 CAACATGCCCACGACGTG 59.444 61.111 21.02 21.02 0.00 4.49
406 411 3.353836 GCAACATGCCCACGACGT 61.354 61.111 0.00 0.00 37.42 4.34
407 412 3.049674 AGCAACATGCCCACGACG 61.050 61.111 0.00 0.00 46.52 5.12
408 413 2.562912 CAGCAACATGCCCACGAC 59.437 61.111 0.00 0.00 46.52 4.34
409 414 3.364441 GCAGCAACATGCCCACGA 61.364 61.111 0.00 0.00 46.52 4.35
410 415 3.210223 TTGCAGCAACATGCCCACG 62.210 57.895 2.83 0.00 46.52 4.94
411 416 1.665599 GTTGCAGCAACATGCCCAC 60.666 57.895 29.80 3.57 46.52 4.61
412 417 2.735883 GTTGCAGCAACATGCCCA 59.264 55.556 29.80 0.00 46.52 5.36
419 424 3.244976 GGTGATTATGTGTTGCAGCAAC 58.755 45.455 28.44 28.44 43.78 4.17
420 425 2.095314 CGGTGATTATGTGTTGCAGCAA 60.095 45.455 4.25 2.83 0.00 3.91
421 426 1.468127 CGGTGATTATGTGTTGCAGCA 59.532 47.619 0.00 0.00 0.00 4.41
422 427 1.468520 ACGGTGATTATGTGTTGCAGC 59.531 47.619 0.00 0.00 0.00 5.25
423 428 2.741517 TGACGGTGATTATGTGTTGCAG 59.258 45.455 0.00 0.00 0.00 4.41
424 429 2.772287 TGACGGTGATTATGTGTTGCA 58.228 42.857 0.00 0.00 0.00 4.08
425 430 3.544048 CGATGACGGTGATTATGTGTTGC 60.544 47.826 0.00 0.00 35.72 4.17
426 431 3.616821 ACGATGACGGTGATTATGTGTTG 59.383 43.478 0.00 0.00 44.46 3.33
427 432 3.616821 CACGATGACGGTGATTATGTGTT 59.383 43.478 0.00 0.00 44.46 3.32
428 433 3.186909 CACGATGACGGTGATTATGTGT 58.813 45.455 0.00 0.00 44.46 3.72
429 434 2.539688 CCACGATGACGGTGATTATGTG 59.460 50.000 0.00 0.00 44.46 3.21
430 435 2.167693 ACCACGATGACGGTGATTATGT 59.832 45.455 0.00 0.00 44.46 2.29
431 436 2.821546 ACCACGATGACGGTGATTATG 58.178 47.619 0.00 0.00 44.46 1.90
432 437 3.887110 TCTACCACGATGACGGTGATTAT 59.113 43.478 0.00 0.00 44.46 1.28
433 438 3.281158 TCTACCACGATGACGGTGATTA 58.719 45.455 0.00 0.00 44.46 1.75
434 439 2.097036 TCTACCACGATGACGGTGATT 58.903 47.619 0.00 0.00 44.46 2.57
435 440 1.676529 CTCTACCACGATGACGGTGAT 59.323 52.381 0.00 0.00 44.46 3.06
436 441 1.092348 CTCTACCACGATGACGGTGA 58.908 55.000 0.00 0.00 44.46 4.02
437 442 0.100682 CCTCTACCACGATGACGGTG 59.899 60.000 0.00 0.00 44.46 4.94
438 443 0.323178 ACCTCTACCACGATGACGGT 60.323 55.000 0.00 0.00 44.46 4.83
439 444 0.815734 AACCTCTACCACGATGACGG 59.184 55.000 0.00 0.00 44.46 4.79
440 445 1.743958 AGAACCTCTACCACGATGACG 59.256 52.381 0.00 0.00 45.75 4.35
441 446 3.512680 CAAGAACCTCTACCACGATGAC 58.487 50.000 0.00 0.00 0.00 3.06
442 447 2.094182 GCAAGAACCTCTACCACGATGA 60.094 50.000 0.00 0.00 0.00 2.92
443 448 2.271800 GCAAGAACCTCTACCACGATG 58.728 52.381 0.00 0.00 0.00 3.84
444 449 1.207329 GGCAAGAACCTCTACCACGAT 59.793 52.381 0.00 0.00 0.00 3.73
445 450 0.606604 GGCAAGAACCTCTACCACGA 59.393 55.000 0.00 0.00 0.00 4.35
446 451 0.736325 CGGCAAGAACCTCTACCACG 60.736 60.000 0.00 0.00 0.00 4.94
447 452 1.019805 GCGGCAAGAACCTCTACCAC 61.020 60.000 0.00 0.00 0.00 4.16
448 453 1.192146 AGCGGCAAGAACCTCTACCA 61.192 55.000 1.45 0.00 0.00 3.25
449 454 0.741221 CAGCGGCAAGAACCTCTACC 60.741 60.000 1.45 0.00 0.00 3.18
450 455 0.741221 CCAGCGGCAAGAACCTCTAC 60.741 60.000 1.45 0.00 0.00 2.59
451 456 0.902984 TCCAGCGGCAAGAACCTCTA 60.903 55.000 1.45 0.00 0.00 2.43
452 457 2.217038 TCCAGCGGCAAGAACCTCT 61.217 57.895 1.45 0.00 0.00 3.69
453 458 2.035442 GTCCAGCGGCAAGAACCTC 61.035 63.158 1.45 0.00 0.00 3.85
454 459 2.032681 GTCCAGCGGCAAGAACCT 59.967 61.111 1.45 0.00 0.00 3.50
455 460 2.032681 AGTCCAGCGGCAAGAACC 59.967 61.111 1.45 0.00 0.00 3.62
456 461 2.035442 GGAGTCCAGCGGCAAGAAC 61.035 63.158 3.60 0.00 0.00 3.01
457 462 2.172483 GAGGAGTCCAGCGGCAAGAA 62.172 60.000 12.86 0.00 0.00 2.52
458 463 2.604686 AGGAGTCCAGCGGCAAGA 60.605 61.111 12.86 0.00 0.00 3.02
459 464 2.125350 GAGGAGTCCAGCGGCAAG 60.125 66.667 12.86 0.00 0.00 4.01
460 465 4.069232 CGAGGAGTCCAGCGGCAA 62.069 66.667 12.86 0.00 0.00 4.52
462 467 4.500116 GACGAGGAGTCCAGCGGC 62.500 72.222 23.00 18.77 43.95 6.53
463 468 4.180946 CGACGAGGAGTCCAGCGG 62.181 72.222 23.00 7.99 46.92 5.52
464 469 4.180946 CCGACGAGGAGTCCAGCG 62.181 72.222 19.19 19.19 46.92 5.18
465 470 4.500116 GCCGACGAGGAGTCCAGC 62.500 72.222 12.86 1.64 46.92 4.85
466 471 4.180946 CGCCGACGAGGAGTCCAG 62.181 72.222 12.86 7.56 46.92 3.86
471 476 4.796231 CCCAACGCCGACGAGGAG 62.796 72.222 0.00 5.04 45.00 3.69
473 478 4.143333 ATCCCAACGCCGACGAGG 62.143 66.667 0.00 0.00 43.93 4.63
474 479 2.582498 GATCCCAACGCCGACGAG 60.582 66.667 0.00 0.00 43.93 4.18
475 480 4.485834 CGATCCCAACGCCGACGA 62.486 66.667 0.00 0.00 43.93 4.20
482 487 3.499737 GCCACAGCGATCCCAACG 61.500 66.667 0.00 0.00 0.00 4.10
483 488 1.244019 AAAGCCACAGCGATCCCAAC 61.244 55.000 0.00 0.00 46.67 3.77
484 489 0.539438 AAAAGCCACAGCGATCCCAA 60.539 50.000 0.00 0.00 46.67 4.12
485 490 1.074775 AAAAGCCACAGCGATCCCA 59.925 52.632 0.00 0.00 46.67 4.37
486 491 1.244019 ACAAAAGCCACAGCGATCCC 61.244 55.000 0.00 0.00 46.67 3.85
487 492 0.598065 AACAAAAGCCACAGCGATCC 59.402 50.000 0.00 0.00 46.67 3.36
488 493 1.001378 ACAACAAAAGCCACAGCGATC 60.001 47.619 0.00 0.00 46.67 3.69
489 494 1.001378 GACAACAAAAGCCACAGCGAT 60.001 47.619 0.00 0.00 46.67 4.58
490 495 0.380378 GACAACAAAAGCCACAGCGA 59.620 50.000 0.00 0.00 46.67 4.93
491 496 0.100325 TGACAACAAAAGCCACAGCG 59.900 50.000 0.00 0.00 46.67 5.18
492 497 2.514205 ATGACAACAAAAGCCACAGC 57.486 45.000 0.00 0.00 40.32 4.40
493 498 3.784338 ACAATGACAACAAAAGCCACAG 58.216 40.909 0.00 0.00 0.00 3.66
494 499 3.733380 CGACAATGACAACAAAAGCCACA 60.733 43.478 0.00 0.00 0.00 4.17
495 500 2.788786 CGACAATGACAACAAAAGCCAC 59.211 45.455 0.00 0.00 0.00 5.01
496 501 2.425312 ACGACAATGACAACAAAAGCCA 59.575 40.909 0.00 0.00 0.00 4.75
497 502 3.042887 GACGACAATGACAACAAAAGCC 58.957 45.455 0.00 0.00 0.00 4.35
498 503 3.042887 GGACGACAATGACAACAAAAGC 58.957 45.455 0.00 0.00 0.00 3.51
499 504 3.550030 GGGGACGACAATGACAACAAAAG 60.550 47.826 0.00 0.00 0.00 2.27
500 505 2.359531 GGGGACGACAATGACAACAAAA 59.640 45.455 0.00 0.00 0.00 2.44
501 506 1.950909 GGGGACGACAATGACAACAAA 59.049 47.619 0.00 0.00 0.00 2.83
502 507 1.134068 TGGGGACGACAATGACAACAA 60.134 47.619 0.00 0.00 0.00 2.83
503 508 0.470341 TGGGGACGACAATGACAACA 59.530 50.000 0.00 0.00 0.00 3.33
504 509 1.156736 CTGGGGACGACAATGACAAC 58.843 55.000 0.00 0.00 0.00 3.32
505 510 1.052617 TCTGGGGACGACAATGACAA 58.947 50.000 0.00 0.00 0.00 3.18
506 511 1.052617 TTCTGGGGACGACAATGACA 58.947 50.000 0.00 0.00 0.00 3.58
507 512 1.002087 AGTTCTGGGGACGACAATGAC 59.998 52.381 0.00 0.00 0.00 3.06
508 513 1.348064 AGTTCTGGGGACGACAATGA 58.652 50.000 0.00 0.00 0.00 2.57
509 514 3.133003 AGATAGTTCTGGGGACGACAATG 59.867 47.826 0.00 0.00 0.00 2.82
510 515 3.375699 AGATAGTTCTGGGGACGACAAT 58.624 45.455 0.00 0.00 0.00 2.71
511 516 2.816411 AGATAGTTCTGGGGACGACAA 58.184 47.619 0.00 0.00 0.00 3.18
512 517 2.526888 AGATAGTTCTGGGGACGACA 57.473 50.000 0.00 0.00 0.00 4.35
513 518 3.816523 CTCTAGATAGTTCTGGGGACGAC 59.183 52.174 0.00 0.00 32.83 4.34
514 519 3.181442 CCTCTAGATAGTTCTGGGGACGA 60.181 52.174 0.00 0.00 32.83 4.20
515 520 3.150767 CCTCTAGATAGTTCTGGGGACG 58.849 54.545 0.00 0.00 32.83 4.79
516 521 4.456662 TCCTCTAGATAGTTCTGGGGAC 57.543 50.000 0.00 0.00 32.83 4.46
517 522 4.202727 CCATCCTCTAGATAGTTCTGGGGA 60.203 50.000 0.00 0.00 32.83 4.81
518 523 4.093011 CCATCCTCTAGATAGTTCTGGGG 58.907 52.174 0.00 0.00 32.37 4.96
519 524 4.093011 CCCATCCTCTAGATAGTTCTGGG 58.907 52.174 0.00 1.03 32.37 4.45
520 525 3.513515 GCCCATCCTCTAGATAGTTCTGG 59.486 52.174 0.00 0.00 32.37 3.86
521 526 4.220382 CAGCCCATCCTCTAGATAGTTCTG 59.780 50.000 0.00 0.00 32.37 3.02
522 527 4.415596 CAGCCCATCCTCTAGATAGTTCT 58.584 47.826 0.00 0.00 32.37 3.01
523 528 3.056179 GCAGCCCATCCTCTAGATAGTTC 60.056 52.174 0.00 0.00 32.37 3.01
524 529 2.903135 GCAGCCCATCCTCTAGATAGTT 59.097 50.000 0.00 0.00 32.37 2.24
525 530 2.534990 GCAGCCCATCCTCTAGATAGT 58.465 52.381 0.00 0.00 32.37 2.12
526 531 1.830477 GGCAGCCCATCCTCTAGATAG 59.170 57.143 0.00 0.00 32.37 2.08
527 532 1.434773 AGGCAGCCCATCCTCTAGATA 59.565 52.381 8.22 0.00 32.37 1.98
528 533 0.193069 AGGCAGCCCATCCTCTAGAT 59.807 55.000 8.22 0.00 34.66 1.98
529 534 0.762082 CAGGCAGCCCATCCTCTAGA 60.762 60.000 8.22 0.00 0.00 2.43
530 535 1.753470 CAGGCAGCCCATCCTCTAG 59.247 63.158 8.22 0.00 0.00 2.43
531 536 1.767672 CCAGGCAGCCCATCCTCTA 60.768 63.158 8.22 0.00 0.00 2.43
532 537 3.095163 CCAGGCAGCCCATCCTCT 61.095 66.667 8.22 0.00 0.00 3.69
533 538 4.891037 GCCAGGCAGCCCATCCTC 62.891 72.222 8.22 0.00 0.00 3.71
536 541 4.175337 TACGCCAGGCAGCCCATC 62.175 66.667 13.30 0.00 0.00 3.51
537 542 4.489771 GTACGCCAGGCAGCCCAT 62.490 66.667 13.30 0.00 0.00 4.00
539 544 2.602746 TAATGTACGCCAGGCAGCCC 62.603 60.000 13.30 0.00 0.00 5.19
540 545 1.153249 TAATGTACGCCAGGCAGCC 60.153 57.895 13.30 1.84 0.00 4.85
541 546 0.742990 TGTAATGTACGCCAGGCAGC 60.743 55.000 13.30 0.71 0.00 5.25
542 547 1.599071 CATGTAATGTACGCCAGGCAG 59.401 52.381 13.30 7.00 40.20 4.85
543 548 1.662517 CATGTAATGTACGCCAGGCA 58.337 50.000 13.30 0.00 40.20 4.75
544 549 0.944386 CCATGTAATGTACGCCAGGC 59.056 55.000 0.00 0.00 44.81 4.85
545 550 2.612212 GTTCCATGTAATGTACGCCAGG 59.388 50.000 0.00 0.00 44.81 4.45
558 563 6.313519 ACACAATATAGGAGTGTTCCATGT 57.686 37.500 0.00 0.00 46.64 3.21
572 577 3.439895 TGGCGAGCGTAACACAATATA 57.560 42.857 0.00 0.00 0.00 0.86
577 582 1.202817 TCTATTGGCGAGCGTAACACA 59.797 47.619 0.00 0.00 0.00 3.72
655 660 4.642445 TCTGACACAGAAACAAGACGTA 57.358 40.909 0.00 0.00 37.57 3.57
687 692 8.375506 TCATACAAACTCAACTTATTCCAGACT 58.624 33.333 0.00 0.00 0.00 3.24
694 699 9.167311 GATCACCTCATACAAACTCAACTTATT 57.833 33.333 0.00 0.00 0.00 1.40
729 734 2.473760 CGCCCGGTCAACAACACAA 61.474 57.895 0.00 0.00 0.00 3.33
804 809 2.803956 TCACGTGTATTCTGGAGTCCT 58.196 47.619 16.51 0.00 0.00 3.85
865 870 9.793259 AGACTTTCCTTCATAAATCAGTTTACA 57.207 29.630 0.00 0.00 32.91 2.41
874 879 7.613022 TGCATCTTGAGACTTTCCTTCATAAAT 59.387 33.333 0.00 0.00 0.00 1.40
921 926 1.948104 AATTTGCCGCTATAGCACGA 58.052 45.000 23.99 12.37 40.69 4.35
957 962 5.070047 CCCTTTCTTACTAATCGCCTTAGGA 59.930 44.000 0.69 0.00 41.07 2.94
1025 1030 4.730657 CAGATCATGGTCAAAAGAAGCAC 58.269 43.478 9.06 0.00 0.00 4.40
1062 1068 1.138568 CATCTCTCAGGATTGCCCCT 58.861 55.000 0.00 0.00 36.90 4.79
1066 1072 3.626670 CCTTTGTCATCTCTCAGGATTGC 59.373 47.826 0.00 0.00 0.00 3.56
1069 1075 5.250313 ACTTTCCTTTGTCATCTCTCAGGAT 59.750 40.000 0.00 0.00 0.00 3.24
1099 1105 2.033448 TCGCCAACTTCCGCCAAT 59.967 55.556 0.00 0.00 0.00 3.16
1130 1136 2.935238 GCTTCTGCCGTTAGAACATCCA 60.935 50.000 0.00 0.00 33.39 3.41
1219 1225 5.100259 CGTGTCAATCACTTCCGTAGTATT 58.900 41.667 0.00 0.00 44.16 1.89
1223 1229 3.211803 TCGTGTCAATCACTTCCGTAG 57.788 47.619 0.00 0.00 44.16 3.51
1272 1278 2.244117 ATCGAACACTGCCATCGCCT 62.244 55.000 0.00 0.00 36.56 5.52
1389 1399 3.557595 CCAATCCATAGTCGCAGAGAAAC 59.442 47.826 0.00 0.00 36.95 2.78
1404 1414 0.039618 GGGCTCCTCAAACCAATCCA 59.960 55.000 0.00 0.00 0.00 3.41
1496 1665 4.505742 CCAGGTAGCCCATCCTCTATTTTC 60.506 50.000 0.00 0.00 30.91 2.29
1531 1979 3.965539 CTTGTCTCAGGCTGCCCCG 62.966 68.421 16.57 7.27 39.21 5.73
1572 2020 2.983930 GACGAGCAGACGCAGGAGT 61.984 63.158 0.00 0.00 42.27 3.85
1577 2025 2.126850 CGAAGACGAGCAGACGCA 60.127 61.111 0.00 0.00 42.27 5.24
1584 2032 2.811317 CACAGCCCGAAGACGAGC 60.811 66.667 0.00 0.00 43.29 5.03
1642 2090 0.107993 CTCTTCTCGGATGCTGGCAA 60.108 55.000 0.00 0.00 0.00 4.52
1662 2110 4.313277 TCTGAGATGCTCAATCTAACCG 57.687 45.455 0.00 0.00 46.12 4.44
1677 2125 5.852282 TCATGTCGTTGGATAATCTGAGA 57.148 39.130 0.00 0.00 0.00 3.27
1681 2129 9.784531 ATAATTCTTCATGTCGTTGGATAATCT 57.215 29.630 0.00 0.00 0.00 2.40
1682 2130 9.817365 CATAATTCTTCATGTCGTTGGATAATC 57.183 33.333 0.00 0.00 0.00 1.75
1687 2135 6.169800 TGTCATAATTCTTCATGTCGTTGGA 58.830 36.000 0.00 0.00 0.00 3.53
1688 2136 6.421377 TGTCATAATTCTTCATGTCGTTGG 57.579 37.500 0.00 0.00 0.00 3.77
1741 2190 1.327690 GGTGGACTCCGGTCATAGCA 61.328 60.000 0.00 0.00 43.77 3.49
1768 2217 1.745115 CAAAGCCAGCGATTCCCGA 60.745 57.895 0.00 0.00 41.76 5.14
1801 2251 2.259917 TCCATGAAAGGAGTGCTCTCA 58.740 47.619 17.04 0.00 42.05 3.27
1810 2260 1.362237 AGGGGCAAATCCATGAAAGGA 59.638 47.619 0.00 0.00 43.01 3.36
1883 2333 2.970639 GTGGCTCTCAGCGTGGTA 59.029 61.111 0.00 0.00 43.62 3.25
1886 2336 3.108289 CACGTGGCTCTCAGCGTG 61.108 66.667 7.95 0.00 43.62 5.34
1890 2340 1.079612 TCATGCACGTGGCTCTCAG 60.080 57.895 18.88 1.19 45.15 3.35
1910 2395 1.831652 AAGGTGGCTCACTTCCTCGG 61.832 60.000 5.48 0.00 34.40 4.63
1911 2396 0.390472 GAAGGTGGCTCACTTCCTCG 60.390 60.000 5.48 0.00 34.40 4.63
1913 2398 1.349357 GAAGAAGGTGGCTCACTTCCT 59.651 52.381 11.03 1.47 34.40 3.36
1914 2399 1.611936 GGAAGAAGGTGGCTCACTTCC 60.612 57.143 16.87 16.87 45.83 3.46
1915 2400 1.349357 AGGAAGAAGGTGGCTCACTTC 59.651 52.381 0.00 0.00 37.02 3.01
1933 2438 1.298014 GGAGGTGACCAAGCTGAGG 59.702 63.158 3.63 3.99 36.52 3.86
1934 2439 1.298014 GGGAGGTGACCAAGCTGAG 59.702 63.158 3.63 0.00 36.52 3.35
1935 2440 2.583441 CGGGAGGTGACCAAGCTGA 61.583 63.158 3.63 0.00 36.52 4.26
1936 2441 2.046892 CGGGAGGTGACCAAGCTG 60.047 66.667 3.63 0.00 36.52 4.24
1953 2458 0.759436 TATTGGAGGTCGAGGGCTCC 60.759 60.000 0.00 0.00 36.58 4.70
1954 2459 0.676736 CTATTGGAGGTCGAGGGCTC 59.323 60.000 0.00 0.00 0.00 4.70
1955 2460 0.032017 ACTATTGGAGGTCGAGGGCT 60.032 55.000 0.00 0.00 0.00 5.19
1956 2461 0.831307 AACTATTGGAGGTCGAGGGC 59.169 55.000 0.00 0.00 0.00 5.19
1957 2462 2.101582 CTCAACTATTGGAGGTCGAGGG 59.898 54.545 0.00 0.00 0.00 4.30
1958 2463 2.761208 ACTCAACTATTGGAGGTCGAGG 59.239 50.000 0.00 0.00 35.45 4.63
1959 2464 4.457834 AACTCAACTATTGGAGGTCGAG 57.542 45.455 0.00 0.00 35.45 4.04
1960 2465 4.562757 CCAAACTCAACTATTGGAGGTCGA 60.563 45.833 0.00 0.00 45.14 4.20
1961 2466 3.684788 CCAAACTCAACTATTGGAGGTCG 59.315 47.826 0.00 0.00 45.14 4.79
1962 2467 4.906618 TCCAAACTCAACTATTGGAGGTC 58.093 43.478 2.48 0.00 45.71 3.85
1963 2468 4.993705 TCCAAACTCAACTATTGGAGGT 57.006 40.909 2.48 0.00 45.71 3.85
1967 2472 2.159707 CGCGTCCAAACTCAACTATTGG 60.160 50.000 0.00 0.00 43.97 3.16
1968 2473 2.159707 CCGCGTCCAAACTCAACTATTG 60.160 50.000 4.92 0.00 0.00 1.90
1969 2474 2.073816 CCGCGTCCAAACTCAACTATT 58.926 47.619 4.92 0.00 0.00 1.73
1970 2475 1.674817 CCCGCGTCCAAACTCAACTAT 60.675 52.381 4.92 0.00 0.00 2.12
1971 2476 0.320073 CCCGCGTCCAAACTCAACTA 60.320 55.000 4.92 0.00 0.00 2.24
1972 2477 1.597027 CCCGCGTCCAAACTCAACT 60.597 57.895 4.92 0.00 0.00 3.16
1973 2478 2.613506 CCCCGCGTCCAAACTCAAC 61.614 63.158 4.92 0.00 0.00 3.18
1974 2479 2.281208 CCCCGCGTCCAAACTCAA 60.281 61.111 4.92 0.00 0.00 3.02
1996 2501 3.728373 ACGCCCTTCATGACCCCC 61.728 66.667 0.00 0.00 0.00 5.40
1997 2502 2.438434 CACGCCCTTCATGACCCC 60.438 66.667 0.00 0.00 0.00 4.95
1998 2503 2.438434 CCACGCCCTTCATGACCC 60.438 66.667 0.00 0.00 0.00 4.46
1999 2504 1.450312 CTCCACGCCCTTCATGACC 60.450 63.158 0.00 0.00 0.00 4.02
2000 2505 0.179000 ATCTCCACGCCCTTCATGAC 59.821 55.000 0.00 0.00 0.00 3.06
2001 2506 0.465705 GATCTCCACGCCCTTCATGA 59.534 55.000 0.00 0.00 0.00 3.07
2002 2507 0.533755 GGATCTCCACGCCCTTCATG 60.534 60.000 0.00 0.00 35.64 3.07
2003 2508 1.700042 GGGATCTCCACGCCCTTCAT 61.700 60.000 0.00 0.00 38.85 2.57
2004 2509 2.367202 GGGATCTCCACGCCCTTCA 61.367 63.158 0.00 0.00 38.85 3.02
2005 2510 2.506472 GGGATCTCCACGCCCTTC 59.494 66.667 0.00 0.00 38.85 3.46
2008 2513 4.554036 GCAGGGATCTCCACGCCC 62.554 72.222 0.00 0.00 42.37 6.13
2009 2514 4.554036 GGCAGGGATCTCCACGCC 62.554 72.222 11.15 11.15 45.22 5.68
2010 2515 4.554036 GGGCAGGGATCTCCACGC 62.554 72.222 0.00 0.00 38.24 5.34
2011 2516 4.227134 CGGGCAGGGATCTCCACG 62.227 72.222 0.00 0.00 38.24 4.94
2012 2517 2.764128 TCGGGCAGGGATCTCCAC 60.764 66.667 0.00 0.00 38.24 4.02
2013 2518 2.444706 CTCGGGCAGGGATCTCCA 60.445 66.667 0.00 0.00 38.24 3.86
2014 2519 3.237741 CCTCGGGCAGGGATCTCC 61.238 72.222 0.00 0.00 38.91 3.71
2044 2748 7.658525 ATGGTTCTATAATTTTGATGTGCCA 57.341 32.000 0.00 0.00 0.00 4.92
2053 2757 8.787818 TGGTAGGAGGAATGGTTCTATAATTTT 58.212 33.333 0.00 0.00 0.00 1.82
2054 2758 8.344939 TGGTAGGAGGAATGGTTCTATAATTT 57.655 34.615 0.00 0.00 0.00 1.82
2057 2761 7.794683 AGAATGGTAGGAGGAATGGTTCTATAA 59.205 37.037 0.00 0.00 0.00 0.98
2092 2796 6.603201 GGATATCTGGACAAAACCTTCATTGA 59.397 38.462 2.05 0.00 0.00 2.57
2104 2808 3.118408 CCAGGTTTCGGATATCTGGACAA 60.118 47.826 19.46 0.35 45.66 3.18
2106 2810 2.224305 CCCAGGTTTCGGATATCTGGAC 60.224 54.545 24.12 10.29 45.66 4.02
2109 2813 3.580458 AGATCCCAGGTTTCGGATATCTG 59.420 47.826 5.07 5.07 39.04 2.90
2117 2821 1.339055 TGAGCAAGATCCCAGGTTTCG 60.339 52.381 0.00 0.00 0.00 3.46
2118 2822 2.496899 TGAGCAAGATCCCAGGTTTC 57.503 50.000 0.00 0.00 0.00 2.78
2119 2823 3.094572 CAATGAGCAAGATCCCAGGTTT 58.905 45.455 0.00 0.00 0.00 3.27
2131 2835 0.889994 GGTGGTGCATCAATGAGCAA 59.110 50.000 0.00 0.00 43.20 3.91
2136 2840 1.200716 GAGTGTGGTGGTGCATCAATG 59.799 52.381 0.00 0.00 0.00 2.82
2139 2843 0.401356 ATGAGTGTGGTGGTGCATCA 59.599 50.000 0.00 0.00 0.00 3.07
2158 2862 1.344953 ACCAACAGCCCTGAGACACA 61.345 55.000 1.69 0.00 0.00 3.72
2183 2887 3.623066 GCAAATATTGTTGCGTCAAGC 57.377 42.857 0.00 0.00 44.05 4.01
2220 2924 3.261643 AGGCATTCATGTACTGTGAGTCA 59.738 43.478 0.00 0.00 0.00 3.41
2222 2926 3.677148 CGAGGCATTCATGTACTGTGAGT 60.677 47.826 0.00 0.00 0.00 3.41
2225 2929 1.328680 GCGAGGCATTCATGTACTGTG 59.671 52.381 0.00 0.00 0.00 3.66
2227 2931 1.328680 GTGCGAGGCATTCATGTACTG 59.671 52.381 0.00 0.00 41.91 2.74
2234 2938 1.071299 ACAGTGTGCGAGGCATTCA 59.929 52.632 0.00 0.00 41.91 2.57
2243 2947 0.581529 ATGTTTCGTCACAGTGTGCG 59.418 50.000 24.68 24.68 35.60 5.34
2250 2954 2.030335 GCATATCGCATGTTTCGTCACA 59.970 45.455 0.00 0.00 41.79 3.58
2264 2968 3.822735 ACCCAATTCCATTCTGCATATCG 59.177 43.478 0.00 0.00 0.00 2.92
2272 2976 1.281867 TCTCGCACCCAATTCCATTCT 59.718 47.619 0.00 0.00 0.00 2.40
2273 2977 1.750193 TCTCGCACCCAATTCCATTC 58.250 50.000 0.00 0.00 0.00 2.67
2279 2983 0.322816 ACAGCATCTCGCACCCAATT 60.323 50.000 0.00 0.00 46.13 2.32
2287 2991 0.740868 TGCCAACTACAGCATCTCGC 60.741 55.000 0.00 0.00 42.91 5.03
2298 3002 5.769662 CCTTCATATTTATGGCTGCCAACTA 59.230 40.000 27.24 11.93 36.95 2.24
2307 3011 4.202567 TGGGGTCTCCTTCATATTTATGGC 60.203 45.833 0.00 0.00 36.20 4.40
2331 3035 2.826128 GTTTCCAATCCACCCCTTTCTC 59.174 50.000 0.00 0.00 0.00 2.87
2353 3057 1.456892 ACCTCGTGTGTGGTCTCCA 60.457 57.895 0.00 0.00 37.40 3.86
2360 3064 1.597027 GTTCCCCACCTCGTGTGTG 60.597 63.158 6.99 3.86 43.85 3.82
2382 3086 1.202770 ACCAATAAGGAGCGGGTATGC 60.203 52.381 0.00 0.00 41.22 3.14
2399 3103 4.641645 CCCAGCCTCACGCAACCA 62.642 66.667 0.00 0.00 41.38 3.67
2413 3117 2.505407 CCTGGTCTGTCATAATGTCCCA 59.495 50.000 0.00 0.00 0.00 4.37
2417 3121 2.171448 GCCTCCTGGTCTGTCATAATGT 59.829 50.000 0.00 0.00 35.27 2.71
2422 3126 1.557269 GGTGCCTCCTGGTCTGTCAT 61.557 60.000 0.00 0.00 35.27 3.06
2423 3127 2.217038 GGTGCCTCCTGGTCTGTCA 61.217 63.158 0.00 0.00 35.27 3.58
2424 3128 2.217038 TGGTGCCTCCTGGTCTGTC 61.217 63.158 0.00 0.00 37.07 3.51
2428 3132 4.035102 GGGTGGTGCCTCCTGGTC 62.035 72.222 8.95 0.00 37.43 4.02
2447 3151 1.078143 GCCTCCGCACTCATTTCCT 60.078 57.895 0.00 0.00 34.03 3.36
2451 3155 0.889186 AAAACGCCTCCGCACTCATT 60.889 50.000 0.00 0.00 38.22 2.57
2453 3157 1.959226 GAAAACGCCTCCGCACTCA 60.959 57.895 0.00 0.00 38.22 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.