Multiple sequence alignment - TraesCS4A01G161200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G161200 chr4A 100.000 2426 0 0 1 2426 349888485 349886060 0.000000e+00 4481.0
1 TraesCS4A01G161200 chr4A 89.431 1987 169 7 3 1977 349909902 349907945 0.000000e+00 2468.0
2 TraesCS4A01G161200 chr4A 90.467 535 49 2 1444 1977 262808906 262808373 0.000000e+00 704.0
3 TraesCS4A01G161200 chr4A 94.878 449 22 1 1978 2426 119578555 119578108 0.000000e+00 701.0
4 TraesCS4A01G161200 chr4A 86.733 603 72 6 676 1273 222116663 222117262 0.000000e+00 664.0
5 TraesCS4A01G161200 chr4A 86.513 608 63 11 676 1273 222137033 222137631 0.000000e+00 651.0
6 TraesCS4A01G161200 chr4A 92.754 69 4 1 356 424 389342741 389342808 5.520000e-17 99.0
7 TraesCS4A01G161200 chr4A 89.333 75 7 1 350 424 401145198 401145271 2.570000e-15 93.5
8 TraesCS4A01G161200 chr1A 90.205 929 81 10 1065 1989 287784625 287783703 0.000000e+00 1203.0
9 TraesCS4A01G161200 chr1A 91.723 447 36 1 1529 1974 279689364 279689810 9.530000e-174 619.0
10 TraesCS4A01G161200 chr1A 86.907 443 48 7 460 895 432405372 432405811 2.800000e-134 488.0
11 TraesCS4A01G161200 chr1A 92.308 39 2 1 366 404 83921067 83921104 1.000000e-03 54.7
12 TraesCS4A01G161200 chr1A 94.444 36 1 1 369 404 83929036 83929070 1.000000e-03 54.7
13 TraesCS4A01G161200 chr3A 90.923 639 57 1 1337 1974 307327666 307328304 0.000000e+00 857.0
14 TraesCS4A01G161200 chr3A 90.297 639 60 2 1337 1974 307374769 307375406 0.000000e+00 835.0
15 TraesCS4A01G161200 chr3A 90.141 639 62 1 1337 1974 307280792 307281430 0.000000e+00 830.0
16 TraesCS4A01G161200 chr3A 89.828 639 63 2 1336 1974 269480586 269481222 0.000000e+00 819.0
17 TraesCS4A01G161200 chr3A 91.944 360 24 4 9 364 294529958 294529600 1.300000e-137 499.0
18 TraesCS4A01G161200 chr3A 90.385 364 30 4 12 373 294555624 294555264 7.850000e-130 473.0
19 TraesCS4A01G161200 chr3A 79.787 658 94 32 1335 1977 602624388 602623755 2.210000e-120 442.0
20 TraesCS4A01G161200 chr3A 95.019 261 10 3 8 266 335918898 335918639 8.080000e-110 407.0
21 TraesCS4A01G161200 chr3A 90.566 265 18 5 8 266 524503915 524504178 6.420000e-91 344.0
22 TraesCS4A01G161200 chr3A 93.103 145 9 1 416 559 215858011 215857867 6.800000e-51 211.0
23 TraesCS4A01G161200 chr3A 93.103 145 9 1 416 559 215875622 215875478 6.800000e-51 211.0
24 TraesCS4A01G161200 chr3A 93.913 115 6 1 768 882 354320602 354320715 3.210000e-39 172.0
25 TraesCS4A01G161200 chr3A 85.385 130 14 5 380 505 543314002 543314130 1.960000e-26 130.0
26 TraesCS4A01G161200 chr2A 89.921 635 62 2 1340 1973 491637706 491637073 0.000000e+00 817.0
27 TraesCS4A01G161200 chr2A 91.255 263 19 2 8 266 445833766 445833504 2.970000e-94 355.0
28 TraesCS4A01G161200 chr2A 87.452 263 26 4 8 266 279747890 279748149 1.820000e-76 296.0
29 TraesCS4A01G161200 chr2A 81.461 178 27 6 605 776 445840707 445840530 9.040000e-30 141.0
30 TraesCS4A01G161200 chr2A 94.286 70 2 2 668 736 379954306 379954374 3.300000e-19 106.0
31 TraesCS4A01G161200 chr2A 93.443 61 4 0 676 736 295125396 295125456 9.240000e-15 91.6
32 TraesCS4A01G161200 chr3B 94.553 459 23 2 1969 2426 117511309 117510852 0.000000e+00 708.0
33 TraesCS4A01G161200 chr1B 94.889 450 22 1 1977 2426 294565803 294566251 0.000000e+00 702.0
34 TraesCS4A01G161200 chr1B 85.385 260 31 6 10 262 225117347 225117088 1.850000e-66 263.0
35 TraesCS4A01G161200 chr7D 94.878 449 22 1 1978 2426 229341090 229341537 0.000000e+00 701.0
36 TraesCS4A01G161200 chr6B 94.878 449 22 1 1978 2426 130256467 130256020 0.000000e+00 701.0
37 TraesCS4A01G161200 chr6B 94.878 449 22 1 1978 2426 244885046 244884599 0.000000e+00 701.0
38 TraesCS4A01G161200 chr5B 94.878 449 22 1 1978 2426 166494311 166494758 0.000000e+00 701.0
39 TraesCS4A01G161200 chr5B 82.609 69 5 5 356 424 230549302 230549363 1.000000e-03 54.7
40 TraesCS4A01G161200 chr2B 94.878 449 22 1 1978 2426 246330865 246330418 0.000000e+00 701.0
41 TraesCS4A01G161200 chr7A 94.505 455 22 2 1972 2424 573470695 573471148 0.000000e+00 699.0
42 TraesCS4A01G161200 chr7A 87.500 608 66 8 676 1276 333945291 333945895 0.000000e+00 693.0
43 TraesCS4A01G161200 chr7A 87.671 511 55 6 773 1277 315909013 315908505 2.690000e-164 588.0
44 TraesCS4A01G161200 chr7A 92.647 68 4 1 356 423 347682430 347682364 1.990000e-16 97.1
45 TraesCS4A01G161200 chr7A 91.304 69 6 0 668 736 282644947 282645015 7.140000e-16 95.3
46 TraesCS4A01G161200 chr7A 91.304 69 5 1 356 424 277251951 277252018 2.570000e-15 93.5
47 TraesCS4A01G161200 chr7A 91.304 69 5 1 356 424 277259812 277259879 2.570000e-15 93.5
48 TraesCS4A01G161200 chr7A 91.304 69 5 1 356 424 347687390 347687457 2.570000e-15 93.5
49 TraesCS4A01G161200 chr7A 91.837 49 2 2 3 50 319861045 319861092 1.560000e-07 67.6
50 TraesCS4A01G161200 chr6A 88.258 511 53 5 772 1277 372069384 372069892 2.670000e-169 604.0
51 TraesCS4A01G161200 chr6A 86.898 519 60 6 765 1277 372060838 372061354 2.090000e-160 575.0
52 TraesCS4A01G161200 chr6A 92.366 262 16 3 8 266 491640276 491640016 1.060000e-98 370.0
53 TraesCS4A01G161200 chr6A 91.954 261 17 4 8 266 491611408 491611150 1.770000e-96 363.0
54 TraesCS4A01G161200 chr6A 82.407 108 8 6 356 455 155276942 155276838 1.550000e-12 84.2
55 TraesCS4A01G161200 chr5A 89.462 465 44 3 950 1411 201464734 201464272 1.250000e-162 582.0
56 TraesCS4A01G161200 chr5A 95.402 261 10 2 8 266 196389576 196389836 4.830000e-112 414.0
57 TraesCS4A01G161200 chr5A 91.667 276 21 2 282 556 137917611 137917337 4.890000e-102 381.0
58 TraesCS4A01G161200 chr5A 88.889 279 29 2 282 559 137923460 137923183 2.310000e-90 342.0
59 TraesCS4A01G161200 chr5A 87.368 190 19 5 1240 1425 265535224 265535412 1.890000e-51 213.0
60 TraesCS4A01G161200 chr5A 89.552 67 7 0 676 742 244535551 244535485 4.300000e-13 86.1
61 TraesCS4A01G161200 chr1D 86.161 224 27 3 10 230 154456234 154456012 3.120000e-59 239.0
62 TraesCS4A01G161200 chr1D 88.430 121 9 4 396 511 340571166 340571046 9.040000e-30 141.0
63 TraesCS4A01G161200 chr1D 87.603 121 10 4 396 511 340578733 340578613 4.210000e-28 135.0
64 TraesCS4A01G161200 chr1D 91.667 72 6 0 440 511 139714932 139715003 1.530000e-17 100.0
65 TraesCS4A01G161200 chr3D 88.430 121 9 4 396 511 287267486 287267366 9.040000e-30 141.0
66 TraesCS4A01G161200 chr3D 86.364 132 10 7 396 519 85358758 85358889 1.170000e-28 137.0
67 TraesCS4A01G161200 chr5D 88.136 118 9 4 396 508 201043717 201043834 4.210000e-28 135.0
68 TraesCS4A01G161200 chr5D 87.069 116 5 7 396 508 219226644 219226752 3.280000e-24 122.0
69 TraesCS4A01G161200 chr4D 88.136 118 9 4 396 508 298833532 298833649 4.210000e-28 135.0
70 TraesCS4A01G161200 chr4D 87.288 118 10 4 396 508 174511555 174511672 1.960000e-26 130.0
71 TraesCS4A01G161200 chr4D 96.491 57 2 0 436 492 105227337 105227281 7.140000e-16 95.3
72 TraesCS4A01G161200 chr4D 90.278 72 4 3 440 508 435535166 435535237 9.240000e-15 91.6
73 TraesCS4A01G161200 chr4D 96.154 52 2 0 440 491 166353788 166353737 4.300000e-13 86.1
74 TraesCS4A01G161200 chr6D 85.606 132 11 7 396 519 271323693 271323562 5.440000e-27 132.0
75 TraesCS4A01G161200 chr6D 90.244 82 5 3 440 519 45260682 45260602 1.190000e-18 104.0
76 TraesCS4A01G161200 chr6D 90.667 75 4 3 440 511 239704971 239704897 1.990000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G161200 chr4A 349886060 349888485 2425 True 4481 4481 100.000 1 2426 1 chr4A.!!$R3 2425
1 TraesCS4A01G161200 chr4A 349907945 349909902 1957 True 2468 2468 89.431 3 1977 1 chr4A.!!$R4 1974
2 TraesCS4A01G161200 chr4A 262808373 262808906 533 True 704 704 90.467 1444 1977 1 chr4A.!!$R2 533
3 TraesCS4A01G161200 chr4A 222116663 222117262 599 False 664 664 86.733 676 1273 1 chr4A.!!$F1 597
4 TraesCS4A01G161200 chr4A 222137033 222137631 598 False 651 651 86.513 676 1273 1 chr4A.!!$F2 597
5 TraesCS4A01G161200 chr1A 287783703 287784625 922 True 1203 1203 90.205 1065 1989 1 chr1A.!!$R1 924
6 TraesCS4A01G161200 chr3A 307327666 307328304 638 False 857 857 90.923 1337 1974 1 chr3A.!!$F3 637
7 TraesCS4A01G161200 chr3A 307374769 307375406 637 False 835 835 90.297 1337 1974 1 chr3A.!!$F4 637
8 TraesCS4A01G161200 chr3A 307280792 307281430 638 False 830 830 90.141 1337 1974 1 chr3A.!!$F2 637
9 TraesCS4A01G161200 chr3A 269480586 269481222 636 False 819 819 89.828 1336 1974 1 chr3A.!!$F1 638
10 TraesCS4A01G161200 chr3A 602623755 602624388 633 True 442 442 79.787 1335 1977 1 chr3A.!!$R6 642
11 TraesCS4A01G161200 chr2A 491637073 491637706 633 True 817 817 89.921 1340 1973 1 chr2A.!!$R3 633
12 TraesCS4A01G161200 chr7A 333945291 333945895 604 False 693 693 87.500 676 1276 1 chr7A.!!$F5 600
13 TraesCS4A01G161200 chr7A 315908505 315909013 508 True 588 588 87.671 773 1277 1 chr7A.!!$R1 504
14 TraesCS4A01G161200 chr6A 372069384 372069892 508 False 604 604 88.258 772 1277 1 chr6A.!!$F2 505
15 TraesCS4A01G161200 chr6A 372060838 372061354 516 False 575 575 86.898 765 1277 1 chr6A.!!$F1 512

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
462 464 0.539438 CCCATCTCTCCCTCCTCTCG 60.539 65.0 0.0 0.0 0.0 4.04 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2033 2071 0.396435 TCACAAACGCATCAGTCCCT 59.604 50.0 0.0 0.0 0.0 4.2 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
109 110 7.419981 CCTTCATCTTCTCCAAATACTCATCCT 60.420 40.741 0.00 0.00 0.00 3.24
113 114 7.113658 TCTTCTCCAAATACTCATCCTGTAC 57.886 40.000 0.00 0.00 0.00 2.90
119 120 5.586243 CCAAATACTCATCCTGTACTTGTGG 59.414 44.000 0.00 0.00 28.74 4.17
120 121 6.406370 CAAATACTCATCCTGTACTTGTGGA 58.594 40.000 0.00 0.00 0.00 4.02
272 274 2.045045 TGGCCCATTCTTCCAGCG 60.045 61.111 0.00 0.00 0.00 5.18
311 313 1.123246 GGCCCATGCATTTAGCCCAT 61.123 55.000 17.06 0.00 44.83 4.00
317 319 2.681319 TGCATTTAGCCCATAGCCAT 57.319 45.000 0.00 0.00 45.47 4.40
325 327 2.599578 CCATAGCCATGCCAGCCC 60.600 66.667 0.00 0.00 0.00 5.19
360 362 2.232941 CGTCCCTGACCTAAAGCTAACA 59.767 50.000 0.00 0.00 0.00 2.41
364 366 5.046807 GTCCCTGACCTAAAGCTAACACTAA 60.047 44.000 0.00 0.00 0.00 2.24
365 367 5.724854 TCCCTGACCTAAAGCTAACACTAAT 59.275 40.000 0.00 0.00 0.00 1.73
390 392 1.684049 CGAACCCTCAGCCTCTCCT 60.684 63.158 0.00 0.00 0.00 3.69
410 412 1.378124 CGTCCTCTCCCTCTCGTTCC 61.378 65.000 0.00 0.00 0.00 3.62
453 455 1.825281 CGCTGGATCCCCATCTCTCC 61.825 65.000 9.90 0.00 42.59 3.71
462 464 0.539438 CCCATCTCTCCCTCCTCTCG 60.539 65.000 0.00 0.00 0.00 4.04
473 475 1.684869 CCTCCTCTCGCTCTCTTCCTT 60.685 57.143 0.00 0.00 0.00 3.36
474 476 1.405105 CTCCTCTCGCTCTCTTCCTTG 59.595 57.143 0.00 0.00 0.00 3.61
489 491 1.825191 CTTGTGCCGATCCCCATGG 60.825 63.158 4.14 4.14 0.00 3.66
494 496 4.275508 CCGATCCCCATGGCCAGG 62.276 72.222 13.05 12.17 0.00 4.45
511 513 2.760385 GACCCCGACCTCCTCCTG 60.760 72.222 0.00 0.00 0.00 3.86
529 531 4.269523 TGGCGCCCTGCTCTTGTT 62.270 61.111 26.77 0.00 45.43 2.83
570 572 4.767255 CCCAGCCTCCTCACGCAC 62.767 72.222 0.00 0.00 0.00 5.34
571 573 4.007644 CCAGCCTCCTCACGCACA 62.008 66.667 0.00 0.00 0.00 4.57
576 578 1.597854 CCTCCTCACGCACAAGCAA 60.598 57.895 0.00 0.00 42.27 3.91
601 603 4.522975 GCCCCGGCAAGCCCTATT 62.523 66.667 5.34 0.00 41.49 1.73
616 618 2.701163 CTATTGCCTCCCGTCGCTCC 62.701 65.000 0.00 0.00 0.00 4.70
649 651 4.767255 CCCCTGCAGGCTGTCGTC 62.767 72.222 28.39 0.00 0.00 4.20
652 654 2.182791 CTGCAGGCTGTCGTCGAT 59.817 61.111 17.16 0.00 0.00 3.59
653 655 2.125952 TGCAGGCTGTCGTCGATG 60.126 61.111 17.16 0.00 0.00 3.84
666 674 3.511595 CGATGGCTGCCGTGCAAT 61.512 61.111 19.98 2.61 38.41 3.56
736 744 2.680352 GTCCTCGGCCTGTCCTCA 60.680 66.667 0.00 0.00 0.00 3.86
739 747 2.286523 CCTCGGCCTGTCCTCAAGT 61.287 63.158 0.00 0.00 0.00 3.16
766 774 3.710722 CCTGCGAGCCTCCCACTT 61.711 66.667 0.00 0.00 0.00 3.16
770 778 3.710722 CGAGCCTCCCACTTGCCT 61.711 66.667 0.00 0.00 0.00 4.75
802 810 4.529219 CACCATCGCCCGCAGCTA 62.529 66.667 0.00 0.00 40.39 3.32
869 877 1.374947 CGCCCAACTCCTCCTTGAA 59.625 57.895 0.00 0.00 0.00 2.69
874 882 1.202927 CCAACTCCTCCTTGAAAGCCA 60.203 52.381 0.00 0.00 0.00 4.75
893 901 4.821589 CTCGCCTCGGACCTTGCC 62.822 72.222 0.00 0.00 0.00 4.52
900 908 3.710722 CGGACCTTGCCCTGCTCT 61.711 66.667 0.00 0.00 0.00 4.09
918 926 2.359975 GGTTTCCCCGAGCACCTG 60.360 66.667 0.00 0.00 0.00 4.00
944 952 1.228337 TCTGCTGCACACCATTGCT 60.228 52.632 0.00 0.00 43.41 3.91
974 982 2.027625 CGCTTCCTGTCGTTGGACC 61.028 63.158 0.00 0.00 42.73 4.46
1058 1070 2.422377 CCCATGCATCTGTGATCCTTCA 60.422 50.000 0.00 0.00 0.00 3.02
1089 1106 2.233305 AGACCAGACCCGTCAAGTAT 57.767 50.000 0.00 0.00 32.41 2.12
1130 1147 0.600057 GAACCACTACCGTCGACCTT 59.400 55.000 10.58 0.00 0.00 3.50
1152 1169 3.249080 TCGAAGAACATGGTTTTTCCGAC 59.751 43.478 0.00 0.00 39.52 4.79
1167 1184 4.703379 TTCCGACTACCCCTTTGTTTTA 57.297 40.909 0.00 0.00 0.00 1.52
1181 1198 6.294508 CCCTTTGTTTTATCAAGACCGTCAAT 60.295 38.462 0.40 0.00 0.00 2.57
1197 1214 0.721718 CAATTCCCTCGACGACAAGC 59.278 55.000 0.00 0.00 0.00 4.01
1204 1221 3.172575 CGACGACAAGCGCACGAT 61.173 61.111 11.47 1.07 46.04 3.73
1355 1374 1.741706 ACATGTACCACTACCGTCGAG 59.258 52.381 0.00 0.00 0.00 4.04
1469 1488 3.961408 CCAGGATTGCTAGTACCACTACT 59.039 47.826 0.00 0.00 37.04 2.57
1470 1489 4.202161 CCAGGATTGCTAGTACCACTACTG 60.202 50.000 0.00 0.00 34.79 2.74
1475 1494 2.015587 GCTAGTACCACTACTGTCGCT 58.984 52.381 0.00 0.00 34.79 4.93
1487 1506 0.738975 CTGTCGCTGAGGACCGATAA 59.261 55.000 0.00 0.00 36.07 1.75
1540 1559 2.313317 TGACTACTTCCCACAACGACT 58.687 47.619 0.00 0.00 0.00 4.18
1621 1640 2.281002 CCCGAACCGTCCCGTTTT 60.281 61.111 0.00 0.00 0.00 2.43
1886 1920 3.942115 TCGTGGCATCATTTTCGGATTAA 59.058 39.130 0.00 0.00 0.00 1.40
1901 1935 2.506884 ATTAACCGCCATGGCACCCA 62.507 55.000 34.93 15.60 43.94 4.51
1910 1945 2.618559 GCCATGGCACCCATTTTCATTT 60.619 45.455 32.08 0.00 42.23 2.32
1983 2021 9.323985 ACAAAATTGCATAAAACATGTGTAAGT 57.676 25.926 0.00 0.00 29.09 2.24
1984 2022 9.583530 CAAAATTGCATAAAACATGTGTAAGTG 57.416 29.630 0.00 0.00 29.09 3.16
1986 2024 5.444663 TGCATAAAACATGTGTAAGTGCA 57.555 34.783 15.14 15.14 37.69 4.57
1987 2025 6.023357 TGCATAAAACATGTGTAAGTGCAT 57.977 33.333 15.14 0.00 35.41 3.96
1988 2026 6.092092 TGCATAAAACATGTGTAAGTGCATC 58.908 36.000 15.14 0.00 35.41 3.91
1989 2027 6.072008 TGCATAAAACATGTGTAAGTGCATCT 60.072 34.615 15.14 0.00 35.41 2.90
1990 2028 7.120432 TGCATAAAACATGTGTAAGTGCATCTA 59.880 33.333 15.14 0.00 35.41 1.98
1991 2029 7.641411 GCATAAAACATGTGTAAGTGCATCTAG 59.359 37.037 0.00 0.00 0.00 2.43
1992 2030 8.668353 CATAAAACATGTGTAAGTGCATCTAGT 58.332 33.333 0.00 0.00 0.00 2.57
1993 2031 6.486253 AAACATGTGTAAGTGCATCTAGTG 57.514 37.500 0.00 0.00 0.00 2.74
2003 2041 3.967886 CATCTAGTGCCCCGTAGTG 57.032 57.895 0.00 0.00 0.00 2.74
2004 2042 1.399714 CATCTAGTGCCCCGTAGTGA 58.600 55.000 0.00 0.00 0.00 3.41
2005 2043 1.964223 CATCTAGTGCCCCGTAGTGAT 59.036 52.381 0.00 0.00 0.00 3.06
2006 2044 2.154567 TCTAGTGCCCCGTAGTGATT 57.845 50.000 0.00 0.00 0.00 2.57
2007 2045 2.463752 TCTAGTGCCCCGTAGTGATTT 58.536 47.619 0.00 0.00 0.00 2.17
2008 2046 2.835764 TCTAGTGCCCCGTAGTGATTTT 59.164 45.455 0.00 0.00 0.00 1.82
2009 2047 1.821216 AGTGCCCCGTAGTGATTTTG 58.179 50.000 0.00 0.00 0.00 2.44
2010 2048 0.808755 GTGCCCCGTAGTGATTTTGG 59.191 55.000 0.00 0.00 0.00 3.28
2011 2049 0.402504 TGCCCCGTAGTGATTTTGGT 59.597 50.000 0.00 0.00 0.00 3.67
2012 2050 0.808755 GCCCCGTAGTGATTTTGGTG 59.191 55.000 0.00 0.00 0.00 4.17
2013 2051 1.884928 GCCCCGTAGTGATTTTGGTGT 60.885 52.381 0.00 0.00 0.00 4.16
2014 2052 2.616001 GCCCCGTAGTGATTTTGGTGTA 60.616 50.000 0.00 0.00 0.00 2.90
2015 2053 3.881220 CCCCGTAGTGATTTTGGTGTAT 58.119 45.455 0.00 0.00 0.00 2.29
2016 2054 4.266714 CCCCGTAGTGATTTTGGTGTATT 58.733 43.478 0.00 0.00 0.00 1.89
2017 2055 4.095782 CCCCGTAGTGATTTTGGTGTATTG 59.904 45.833 0.00 0.00 0.00 1.90
2018 2056 4.938832 CCCGTAGTGATTTTGGTGTATTGA 59.061 41.667 0.00 0.00 0.00 2.57
2019 2057 5.413213 CCCGTAGTGATTTTGGTGTATTGAA 59.587 40.000 0.00 0.00 0.00 2.69
2020 2058 6.403200 CCCGTAGTGATTTTGGTGTATTGAAG 60.403 42.308 0.00 0.00 0.00 3.02
2021 2059 6.370442 CCGTAGTGATTTTGGTGTATTGAAGA 59.630 38.462 0.00 0.00 0.00 2.87
2022 2060 7.234384 CGTAGTGATTTTGGTGTATTGAAGAC 58.766 38.462 0.00 0.00 0.00 3.01
2023 2061 7.117812 CGTAGTGATTTTGGTGTATTGAAGACT 59.882 37.037 0.00 0.00 0.00 3.24
2024 2062 7.823745 AGTGATTTTGGTGTATTGAAGACTT 57.176 32.000 0.00 0.00 0.00 3.01
2025 2063 8.918202 AGTGATTTTGGTGTATTGAAGACTTA 57.082 30.769 0.00 0.00 0.00 2.24
2026 2064 9.520515 AGTGATTTTGGTGTATTGAAGACTTAT 57.479 29.630 0.00 0.00 0.00 1.73
2030 2068 9.975218 ATTTTGGTGTATTGAAGACTTATAGGT 57.025 29.630 0.00 0.00 0.00 3.08
2031 2069 9.802039 TTTTGGTGTATTGAAGACTTATAGGTT 57.198 29.630 0.00 0.00 0.00 3.50
2035 2073 9.543783 GGTGTATTGAAGACTTATAGGTTAAGG 57.456 37.037 0.00 0.00 0.00 2.69
2036 2074 9.543783 GTGTATTGAAGACTTATAGGTTAAGGG 57.456 37.037 0.00 0.00 0.00 3.95
2037 2075 9.496710 TGTATTGAAGACTTATAGGTTAAGGGA 57.503 33.333 0.00 0.00 0.00 4.20
2038 2076 9.761504 GTATTGAAGACTTATAGGTTAAGGGAC 57.238 37.037 0.00 0.00 0.00 4.46
2040 2078 7.419711 TGAAGACTTATAGGTTAAGGGACTG 57.580 40.000 0.00 0.00 40.86 3.51
2041 2079 7.186972 TGAAGACTTATAGGTTAAGGGACTGA 58.813 38.462 0.00 0.00 40.86 3.41
2042 2080 7.844779 TGAAGACTTATAGGTTAAGGGACTGAT 59.155 37.037 0.00 0.00 40.86 2.90
2043 2081 7.604657 AGACTTATAGGTTAAGGGACTGATG 57.395 40.000 0.00 0.00 40.86 3.07
2044 2082 6.042208 AGACTTATAGGTTAAGGGACTGATGC 59.958 42.308 0.00 0.00 40.86 3.91
2045 2083 3.753294 ATAGGTTAAGGGACTGATGCG 57.247 47.619 0.00 0.00 40.86 4.73
2046 2084 1.276622 AGGTTAAGGGACTGATGCGT 58.723 50.000 0.00 0.00 40.86 5.24
2047 2085 1.628846 AGGTTAAGGGACTGATGCGTT 59.371 47.619 0.00 0.00 40.86 4.84
2048 2086 2.039879 AGGTTAAGGGACTGATGCGTTT 59.960 45.455 0.00 0.00 40.86 3.60
2049 2087 2.161609 GGTTAAGGGACTGATGCGTTTG 59.838 50.000 0.00 0.00 40.86 2.93
2050 2088 2.812011 GTTAAGGGACTGATGCGTTTGT 59.188 45.455 0.00 0.00 40.86 2.83
2051 2089 1.238439 AAGGGACTGATGCGTTTGTG 58.762 50.000 0.00 0.00 40.86 3.33
2052 2090 0.396435 AGGGACTGATGCGTTTGTGA 59.604 50.000 0.00 0.00 37.18 3.58
2053 2091 0.798776 GGGACTGATGCGTTTGTGAG 59.201 55.000 0.00 0.00 0.00 3.51
2054 2092 1.512926 GGACTGATGCGTTTGTGAGT 58.487 50.000 0.00 0.00 0.00 3.41
2055 2093 1.195448 GGACTGATGCGTTTGTGAGTG 59.805 52.381 0.00 0.00 0.00 3.51
2056 2094 1.867233 GACTGATGCGTTTGTGAGTGT 59.133 47.619 0.00 0.00 0.00 3.55
2057 2095 3.057019 GACTGATGCGTTTGTGAGTGTA 58.943 45.455 0.00 0.00 0.00 2.90
2058 2096 2.800544 ACTGATGCGTTTGTGAGTGTAC 59.199 45.455 0.00 0.00 0.00 2.90
2059 2097 2.799978 CTGATGCGTTTGTGAGTGTACA 59.200 45.455 0.00 0.00 0.00 2.90
2060 2098 2.542178 TGATGCGTTTGTGAGTGTACAC 59.458 45.455 18.56 18.56 40.68 2.90
2061 2099 2.011540 TGCGTTTGTGAGTGTACACA 57.988 45.000 27.06 5.37 46.86 3.72
2071 2109 6.510879 TGTGAGTGTACACAGGTCTATAAG 57.489 41.667 27.06 0.00 44.29 1.73
2072 2110 6.008331 TGTGAGTGTACACAGGTCTATAAGT 58.992 40.000 27.06 2.15 44.29 2.24
2073 2111 6.150641 TGTGAGTGTACACAGGTCTATAAGTC 59.849 42.308 27.06 11.81 44.29 3.01
2074 2112 6.374894 GTGAGTGTACACAGGTCTATAAGTCT 59.625 42.308 27.06 1.48 40.11 3.24
2075 2113 7.551974 GTGAGTGTACACAGGTCTATAAGTCTA 59.448 40.741 27.06 1.34 40.11 2.59
2076 2114 8.272889 TGAGTGTACACAGGTCTATAAGTCTAT 58.727 37.037 27.06 0.40 0.00 1.98
2077 2115 8.453238 AGTGTACACAGGTCTATAAGTCTATG 57.547 38.462 27.06 0.00 0.00 2.23
2078 2116 8.272889 AGTGTACACAGGTCTATAAGTCTATGA 58.727 37.037 27.06 0.00 0.00 2.15
2079 2117 8.561212 GTGTACACAGGTCTATAAGTCTATGAG 58.439 40.741 21.14 0.00 0.00 2.90
2080 2118 7.720074 TGTACACAGGTCTATAAGTCTATGAGG 59.280 40.741 0.00 0.00 0.00 3.86
2081 2119 6.912426 ACACAGGTCTATAAGTCTATGAGGA 58.088 40.000 0.00 0.00 0.00 3.71
2082 2120 7.531317 ACACAGGTCTATAAGTCTATGAGGAT 58.469 38.462 0.00 0.00 0.00 3.24
2083 2121 8.007742 ACACAGGTCTATAAGTCTATGAGGATT 58.992 37.037 0.00 0.00 0.00 3.01
2084 2122 8.865090 CACAGGTCTATAAGTCTATGAGGATTT 58.135 37.037 0.00 0.00 0.00 2.17
2085 2123 9.440761 ACAGGTCTATAAGTCTATGAGGATTTT 57.559 33.333 0.00 0.00 0.00 1.82
2086 2124 9.703892 CAGGTCTATAAGTCTATGAGGATTTTG 57.296 37.037 0.00 0.00 0.00 2.44
2087 2125 9.661954 AGGTCTATAAGTCTATGAGGATTTTGA 57.338 33.333 0.00 0.00 0.00 2.69
2109 2147 9.760077 TTTGATATTTATAGAGAAAGTCGACCC 57.240 33.333 13.01 1.75 0.00 4.46
2110 2148 7.893658 TGATATTTATAGAGAAAGTCGACCCC 58.106 38.462 13.01 1.35 0.00 4.95
2111 2149 7.728981 TGATATTTATAGAGAAAGTCGACCCCT 59.271 37.037 13.01 6.81 0.00 4.79
2112 2150 9.240734 GATATTTATAGAGAAAGTCGACCCCTA 57.759 37.037 13.01 7.14 0.00 3.53
2113 2151 7.909485 ATTTATAGAGAAAGTCGACCCCTAA 57.091 36.000 13.01 0.00 0.00 2.69
2114 2152 7.722949 TTTATAGAGAAAGTCGACCCCTAAA 57.277 36.000 13.01 3.28 0.00 1.85
2115 2153 7.722949 TTATAGAGAAAGTCGACCCCTAAAA 57.277 36.000 13.01 0.00 0.00 1.52
2116 2154 4.968971 AGAGAAAGTCGACCCCTAAAAA 57.031 40.909 13.01 0.00 0.00 1.94
2117 2155 5.500546 AGAGAAAGTCGACCCCTAAAAAT 57.499 39.130 13.01 0.00 0.00 1.82
2118 2156 5.246307 AGAGAAAGTCGACCCCTAAAAATG 58.754 41.667 13.01 0.00 0.00 2.32
2119 2157 5.012768 AGAGAAAGTCGACCCCTAAAAATGA 59.987 40.000 13.01 0.00 0.00 2.57
2120 2158 5.627135 AGAAAGTCGACCCCTAAAAATGAA 58.373 37.500 13.01 0.00 0.00 2.57
2121 2159 5.705905 AGAAAGTCGACCCCTAAAAATGAAG 59.294 40.000 13.01 0.00 0.00 3.02
2122 2160 4.635699 AGTCGACCCCTAAAAATGAAGT 57.364 40.909 13.01 0.00 0.00 3.01
2123 2161 4.981812 AGTCGACCCCTAAAAATGAAGTT 58.018 39.130 13.01 0.00 0.00 2.66
2124 2162 5.001874 AGTCGACCCCTAAAAATGAAGTTC 58.998 41.667 13.01 0.00 0.00 3.01
2125 2163 5.001874 GTCGACCCCTAAAAATGAAGTTCT 58.998 41.667 3.51 0.00 0.00 3.01
2126 2164 5.472478 GTCGACCCCTAAAAATGAAGTTCTT 59.528 40.000 3.51 0.00 0.00 2.52
2127 2165 5.704053 TCGACCCCTAAAAATGAAGTTCTTC 59.296 40.000 4.17 5.70 0.00 2.87
2128 2166 5.390567 CGACCCCTAAAAATGAAGTTCTTCG 60.391 44.000 4.17 0.00 0.00 3.79
2129 2167 5.627135 ACCCCTAAAAATGAAGTTCTTCGA 58.373 37.500 4.17 0.00 0.00 3.71
2130 2168 5.472478 ACCCCTAAAAATGAAGTTCTTCGAC 59.528 40.000 4.17 0.00 0.00 4.20
2131 2169 5.705905 CCCCTAAAAATGAAGTTCTTCGACT 59.294 40.000 4.17 0.00 0.00 4.18
2132 2170 6.348540 CCCCTAAAAATGAAGTTCTTCGACTG 60.349 42.308 4.17 0.00 0.00 3.51
2133 2171 6.426937 CCCTAAAAATGAAGTTCTTCGACTGA 59.573 38.462 4.17 0.00 0.00 3.41
2134 2172 7.041372 CCCTAAAAATGAAGTTCTTCGACTGAA 60.041 37.037 4.17 0.00 0.00 3.02
2147 2185 5.824243 TTCGACTGAAGACTTCGAATTTC 57.176 39.130 10.56 4.40 44.54 2.17
2148 2186 4.235360 TCGACTGAAGACTTCGAATTTCC 58.765 43.478 10.56 0.00 38.77 3.13
2149 2187 3.059570 CGACTGAAGACTTCGAATTTCCG 59.940 47.826 10.56 3.10 34.62 4.30
2150 2188 4.235360 GACTGAAGACTTCGAATTTCCGA 58.765 43.478 10.56 0.00 36.70 4.55
2151 2189 4.628074 ACTGAAGACTTCGAATTTCCGAA 58.372 39.130 10.56 2.48 45.01 4.30
2160 2198 2.991190 TCGAATTTCCGAAGACTTTCCG 59.009 45.455 0.00 0.00 35.42 4.30
2161 2199 2.991190 CGAATTTCCGAAGACTTTCCGA 59.009 45.455 0.00 0.00 0.00 4.55
2162 2200 3.430895 CGAATTTCCGAAGACTTTCCGAA 59.569 43.478 0.00 0.00 31.60 4.30
2163 2201 4.434330 CGAATTTCCGAAGACTTTCCGAAG 60.434 45.833 0.00 0.00 33.92 3.79
2164 2202 3.738830 TTTCCGAAGACTTTCCGAAGA 57.261 42.857 0.00 0.00 33.92 2.87
2165 2203 2.719426 TCCGAAGACTTTCCGAAGAC 57.281 50.000 0.00 0.00 36.69 3.01
2166 2204 2.236766 TCCGAAGACTTTCCGAAGACT 58.763 47.619 0.00 0.00 39.10 3.24
2167 2205 2.626743 TCCGAAGACTTTCCGAAGACTT 59.373 45.455 4.11 4.11 45.87 3.01
2168 2206 3.069158 TCCGAAGACTTTCCGAAGACTTT 59.931 43.478 5.61 0.00 44.18 2.66
2169 2207 3.184581 CCGAAGACTTTCCGAAGACTTTG 59.815 47.826 9.93 9.93 44.18 2.77
2170 2208 4.049186 CGAAGACTTTCCGAAGACTTTGA 58.951 43.478 3.82 0.00 44.67 2.69
2171 2209 4.506654 CGAAGACTTTCCGAAGACTTTGAA 59.493 41.667 3.82 0.94 44.67 2.69
2172 2210 5.006358 CGAAGACTTTCCGAAGACTTTGAAA 59.994 40.000 3.82 8.43 44.67 2.69
2173 2211 5.993106 AGACTTTCCGAAGACTTTGAAAG 57.007 39.130 24.92 24.92 45.70 2.62
2176 2214 5.734855 CTTTCCGAAGACTTTGAAAGTGA 57.265 39.130 16.25 3.11 43.03 3.41
2177 2215 6.119144 CTTTCCGAAGACTTTGAAAGTGAA 57.881 37.500 16.25 9.25 43.03 3.18
2178 2216 5.734855 TTCCGAAGACTTTGAAAGTGAAG 57.265 39.130 16.25 4.14 43.03 3.02
2179 2217 5.018539 TCCGAAGACTTTGAAAGTGAAGA 57.981 39.130 16.25 2.42 43.03 2.87
2180 2218 5.424757 TCCGAAGACTTTGAAAGTGAAGAA 58.575 37.500 16.25 0.00 43.03 2.52
2181 2219 5.878116 TCCGAAGACTTTGAAAGTGAAGAAA 59.122 36.000 16.25 0.00 43.03 2.52
2182 2220 6.542370 TCCGAAGACTTTGAAAGTGAAGAAAT 59.458 34.615 16.25 0.00 43.03 2.17
2183 2221 7.067008 TCCGAAGACTTTGAAAGTGAAGAAATT 59.933 33.333 16.25 0.00 43.03 1.82
2184 2222 7.166473 CCGAAGACTTTGAAAGTGAAGAAATTG 59.834 37.037 16.25 0.00 43.03 2.32
2185 2223 7.166473 CGAAGACTTTGAAAGTGAAGAAATTGG 59.834 37.037 16.25 0.00 43.03 3.16
2186 2224 7.410120 AGACTTTGAAAGTGAAGAAATTGGT 57.590 32.000 16.25 0.00 43.03 3.67
2187 2225 7.260603 AGACTTTGAAAGTGAAGAAATTGGTG 58.739 34.615 16.25 0.00 43.03 4.17
2188 2226 6.935167 ACTTTGAAAGTGAAGAAATTGGTGT 58.065 32.000 10.18 0.00 41.01 4.16
2189 2227 6.813152 ACTTTGAAAGTGAAGAAATTGGTGTG 59.187 34.615 10.18 0.00 41.01 3.82
2190 2228 6.522625 TTGAAAGTGAAGAAATTGGTGTGA 57.477 33.333 0.00 0.00 0.00 3.58
2191 2229 6.713762 TGAAAGTGAAGAAATTGGTGTGAT 57.286 33.333 0.00 0.00 0.00 3.06
2192 2230 6.738114 TGAAAGTGAAGAAATTGGTGTGATC 58.262 36.000 0.00 0.00 0.00 2.92
2193 2231 5.712152 AAGTGAAGAAATTGGTGTGATCC 57.288 39.130 0.00 0.00 0.00 3.36
2194 2232 4.990526 AGTGAAGAAATTGGTGTGATCCT 58.009 39.130 0.00 0.00 0.00 3.24
2195 2233 4.763793 AGTGAAGAAATTGGTGTGATCCTG 59.236 41.667 0.00 0.00 0.00 3.86
2196 2234 4.761739 GTGAAGAAATTGGTGTGATCCTGA 59.238 41.667 0.00 0.00 0.00 3.86
2197 2235 5.241506 GTGAAGAAATTGGTGTGATCCTGAA 59.758 40.000 0.00 0.00 0.00 3.02
2198 2236 5.832595 TGAAGAAATTGGTGTGATCCTGAAA 59.167 36.000 0.00 0.00 0.00 2.69
2199 2237 6.323482 TGAAGAAATTGGTGTGATCCTGAAAA 59.677 34.615 0.00 0.00 0.00 2.29
2200 2238 6.089249 AGAAATTGGTGTGATCCTGAAAAC 57.911 37.500 0.00 0.00 0.00 2.43
2201 2239 5.835280 AGAAATTGGTGTGATCCTGAAAACT 59.165 36.000 0.00 0.00 0.00 2.66
2202 2240 6.324770 AGAAATTGGTGTGATCCTGAAAACTT 59.675 34.615 0.00 0.00 0.00 2.66
2203 2241 4.916983 TTGGTGTGATCCTGAAAACTTG 57.083 40.909 0.00 0.00 0.00 3.16
2204 2242 3.221771 TGGTGTGATCCTGAAAACTTGG 58.778 45.455 0.00 0.00 0.00 3.61
2205 2243 3.222603 GGTGTGATCCTGAAAACTTGGT 58.777 45.455 0.00 0.00 0.00 3.67
2206 2244 4.141367 TGGTGTGATCCTGAAAACTTGGTA 60.141 41.667 0.00 0.00 0.00 3.25
2207 2245 5.010282 GGTGTGATCCTGAAAACTTGGTAT 58.990 41.667 0.00 0.00 0.00 2.73
2208 2246 5.476945 GGTGTGATCCTGAAAACTTGGTATT 59.523 40.000 0.00 0.00 0.00 1.89
2209 2247 6.349363 GGTGTGATCCTGAAAACTTGGTATTC 60.349 42.308 0.00 0.00 0.00 1.75
2210 2248 6.206634 GTGTGATCCTGAAAACTTGGTATTCA 59.793 38.462 0.00 0.00 0.00 2.57
2211 2249 6.947733 TGTGATCCTGAAAACTTGGTATTCAT 59.052 34.615 0.00 0.00 33.03 2.57
2212 2250 7.451255 TGTGATCCTGAAAACTTGGTATTCATT 59.549 33.333 0.00 0.00 33.03 2.57
2213 2251 7.970614 GTGATCCTGAAAACTTGGTATTCATTC 59.029 37.037 0.00 0.00 33.03 2.67
2214 2252 6.494893 TCCTGAAAACTTGGTATTCATTCG 57.505 37.500 0.00 0.00 33.03 3.34
2215 2253 6.234920 TCCTGAAAACTTGGTATTCATTCGA 58.765 36.000 0.00 0.00 33.03 3.71
2216 2254 6.371548 TCCTGAAAACTTGGTATTCATTCGAG 59.628 38.462 0.00 0.00 33.03 4.04
2217 2255 6.403636 CCTGAAAACTTGGTATTCATTCGAGG 60.404 42.308 0.00 0.00 33.03 4.63
2218 2256 6.234920 TGAAAACTTGGTATTCATTCGAGGA 58.765 36.000 0.00 0.00 0.00 3.71
2219 2257 6.712998 TGAAAACTTGGTATTCATTCGAGGAA 59.287 34.615 4.37 4.37 0.00 3.36
2220 2258 7.393234 TGAAAACTTGGTATTCATTCGAGGAAT 59.607 33.333 15.76 15.76 38.46 3.01
2221 2259 8.801882 AAAACTTGGTATTCATTCGAGGAATA 57.198 30.769 14.19 14.19 36.45 1.75
2222 2260 8.980481 AAACTTGGTATTCATTCGAGGAATAT 57.020 30.769 18.65 5.87 38.91 1.28
2223 2261 7.969536 ACTTGGTATTCATTCGAGGAATATG 57.030 36.000 18.65 6.35 38.91 1.78
2224 2262 7.735917 ACTTGGTATTCATTCGAGGAATATGA 58.264 34.615 18.65 8.33 38.91 2.15
2225 2263 8.210946 ACTTGGTATTCATTCGAGGAATATGAA 58.789 33.333 18.65 15.17 41.12 2.57
2226 2264 8.607441 TTGGTATTCATTCGAGGAATATGAAG 57.393 34.615 18.65 0.00 40.45 3.02
2227 2265 7.735917 TGGTATTCATTCGAGGAATATGAAGT 58.264 34.615 18.65 9.34 40.45 3.01
2228 2266 7.657354 TGGTATTCATTCGAGGAATATGAAGTG 59.343 37.037 18.65 0.00 40.45 3.16
2229 2267 7.657761 GGTATTCATTCGAGGAATATGAAGTGT 59.342 37.037 18.65 6.00 40.45 3.55
2230 2268 6.908870 TTCATTCGAGGAATATGAAGTGTG 57.091 37.500 5.55 0.00 34.36 3.82
2231 2269 6.220726 TCATTCGAGGAATATGAAGTGTGA 57.779 37.500 0.00 0.00 30.44 3.58
2232 2270 6.639563 TCATTCGAGGAATATGAAGTGTGAA 58.360 36.000 0.00 0.00 30.44 3.18
2233 2271 6.758416 TCATTCGAGGAATATGAAGTGTGAAG 59.242 38.462 0.00 0.00 30.44 3.02
2234 2272 5.914898 TCGAGGAATATGAAGTGTGAAGA 57.085 39.130 0.00 0.00 0.00 2.87
2235 2273 6.280855 TCGAGGAATATGAAGTGTGAAGAA 57.719 37.500 0.00 0.00 0.00 2.52
2236 2274 6.878317 TCGAGGAATATGAAGTGTGAAGAAT 58.122 36.000 0.00 0.00 0.00 2.40
2237 2275 7.331026 TCGAGGAATATGAAGTGTGAAGAATT 58.669 34.615 0.00 0.00 0.00 2.17
2238 2276 7.824289 TCGAGGAATATGAAGTGTGAAGAATTT 59.176 33.333 0.00 0.00 0.00 1.82
2239 2277 8.454106 CGAGGAATATGAAGTGTGAAGAATTTT 58.546 33.333 0.00 0.00 0.00 1.82
2240 2278 9.565213 GAGGAATATGAAGTGTGAAGAATTTTG 57.435 33.333 0.00 0.00 0.00 2.44
2241 2279 9.082313 AGGAATATGAAGTGTGAAGAATTTTGT 57.918 29.630 0.00 0.00 0.00 2.83
2242 2280 9.696917 GGAATATGAAGTGTGAAGAATTTTGTT 57.303 29.630 0.00 0.00 0.00 2.83
2246 2284 7.504922 TGAAGTGTGAAGAATTTTGTTTTCG 57.495 32.000 0.00 0.00 0.00 3.46
2247 2285 7.087639 TGAAGTGTGAAGAATTTTGTTTTCGT 58.912 30.769 0.00 0.00 0.00 3.85
2248 2286 8.237949 TGAAGTGTGAAGAATTTTGTTTTCGTA 58.762 29.630 0.00 0.00 0.00 3.43
2249 2287 8.614994 AAGTGTGAAGAATTTTGTTTTCGTAG 57.385 30.769 0.00 0.00 0.00 3.51
2250 2288 7.758495 AGTGTGAAGAATTTTGTTTTCGTAGT 58.242 30.769 0.00 0.00 0.00 2.73
2251 2289 8.241367 AGTGTGAAGAATTTTGTTTTCGTAGTT 58.759 29.630 0.00 0.00 0.00 2.24
2252 2290 8.856247 GTGTGAAGAATTTTGTTTTCGTAGTTT 58.144 29.630 0.00 0.00 0.00 2.66
2271 2309 9.931210 CGTAGTTTAATTTTCTGTTTCTTGAGT 57.069 29.630 0.00 0.00 0.00 3.41
2283 2321 8.603242 TCTGTTTCTTGAGTTATAGGAAACAC 57.397 34.615 13.23 0.00 45.60 3.32
2284 2322 8.429641 TCTGTTTCTTGAGTTATAGGAAACACT 58.570 33.333 13.23 0.00 45.60 3.55
2285 2323 8.378172 TGTTTCTTGAGTTATAGGAAACACTG 57.622 34.615 13.23 0.00 45.60 3.66
2286 2324 7.990886 TGTTTCTTGAGTTATAGGAAACACTGT 59.009 33.333 13.23 0.00 45.60 3.55
2287 2325 9.485206 GTTTCTTGAGTTATAGGAAACACTGTA 57.515 33.333 10.63 0.00 42.71 2.74
2288 2326 9.485206 TTTCTTGAGTTATAGGAAACACTGTAC 57.515 33.333 0.00 0.00 0.00 2.90
2289 2327 8.418597 TCTTGAGTTATAGGAAACACTGTACT 57.581 34.615 0.00 0.00 0.00 2.73
2290 2328 8.304596 TCTTGAGTTATAGGAAACACTGTACTG 58.695 37.037 0.00 0.00 0.00 2.74
2291 2329 7.534723 TGAGTTATAGGAAACACTGTACTGT 57.465 36.000 0.00 0.00 0.00 3.55
2292 2330 7.959175 TGAGTTATAGGAAACACTGTACTGTT 58.041 34.615 2.16 0.00 35.83 3.16
2293 2331 9.081204 TGAGTTATAGGAAACACTGTACTGTTA 57.919 33.333 2.16 0.00 33.03 2.41
2294 2332 9.918630 GAGTTATAGGAAACACTGTACTGTTAA 57.081 33.333 2.16 0.00 33.03 2.01
2297 2335 9.715121 TTATAGGAAACACTGTACTGTTAAAGG 57.285 33.333 2.16 0.00 33.03 3.11
2298 2336 5.374071 AGGAAACACTGTACTGTTAAAGGG 58.626 41.667 2.16 0.00 33.03 3.95
2299 2337 4.517832 GGAAACACTGTACTGTTAAAGGGG 59.482 45.833 2.16 0.00 33.03 4.79
2300 2338 3.782656 ACACTGTACTGTTAAAGGGGG 57.217 47.619 2.16 0.00 0.00 5.40
2301 2339 3.050835 ACACTGTACTGTTAAAGGGGGT 58.949 45.455 2.16 0.00 0.00 4.95
2302 2340 3.072038 ACACTGTACTGTTAAAGGGGGTC 59.928 47.826 2.16 0.00 0.00 4.46
2303 2341 2.301009 ACTGTACTGTTAAAGGGGGTCG 59.699 50.000 0.00 0.00 0.00 4.79
2304 2342 2.564062 CTGTACTGTTAAAGGGGGTCGA 59.436 50.000 0.00 0.00 0.00 4.20
2305 2343 2.564062 TGTACTGTTAAAGGGGGTCGAG 59.436 50.000 0.00 0.00 0.00 4.04
2306 2344 0.981943 ACTGTTAAAGGGGGTCGAGG 59.018 55.000 0.00 0.00 0.00 4.63
2307 2345 1.272807 CTGTTAAAGGGGGTCGAGGA 58.727 55.000 0.00 0.00 0.00 3.71
2308 2346 1.626825 CTGTTAAAGGGGGTCGAGGAA 59.373 52.381 0.00 0.00 0.00 3.36
2309 2347 2.039348 CTGTTAAAGGGGGTCGAGGAAA 59.961 50.000 0.00 0.00 0.00 3.13
2310 2348 2.645797 TGTTAAAGGGGGTCGAGGAAAT 59.354 45.455 0.00 0.00 0.00 2.17
2311 2349 3.845398 TGTTAAAGGGGGTCGAGGAAATA 59.155 43.478 0.00 0.00 0.00 1.40
2312 2350 4.194640 GTTAAAGGGGGTCGAGGAAATAC 58.805 47.826 0.00 0.00 0.00 1.89
2313 2351 2.265526 AAGGGGGTCGAGGAAATACT 57.734 50.000 0.00 0.00 0.00 2.12
2314 2352 3.409804 AAGGGGGTCGAGGAAATACTA 57.590 47.619 0.00 0.00 0.00 1.82
2315 2353 3.409804 AGGGGGTCGAGGAAATACTAA 57.590 47.619 0.00 0.00 0.00 2.24
2316 2354 3.306613 AGGGGGTCGAGGAAATACTAAG 58.693 50.000 0.00 0.00 0.00 2.18
2317 2355 2.367894 GGGGGTCGAGGAAATACTAAGG 59.632 54.545 0.00 0.00 0.00 2.69
2318 2356 3.303049 GGGGTCGAGGAAATACTAAGGA 58.697 50.000 0.00 0.00 0.00 3.36
2319 2357 3.708121 GGGGTCGAGGAAATACTAAGGAA 59.292 47.826 0.00 0.00 0.00 3.36
2320 2358 4.162888 GGGGTCGAGGAAATACTAAGGAAA 59.837 45.833 0.00 0.00 0.00 3.13
2321 2359 5.338626 GGGGTCGAGGAAATACTAAGGAAAA 60.339 44.000 0.00 0.00 0.00 2.29
2322 2360 6.175471 GGGTCGAGGAAATACTAAGGAAAAA 58.825 40.000 0.00 0.00 0.00 1.94
2323 2361 6.827251 GGGTCGAGGAAATACTAAGGAAAAAT 59.173 38.462 0.00 0.00 0.00 1.82
2324 2362 7.338703 GGGTCGAGGAAATACTAAGGAAAAATT 59.661 37.037 0.00 0.00 0.00 1.82
2325 2363 8.737175 GGTCGAGGAAATACTAAGGAAAAATTT 58.263 33.333 0.00 0.00 0.00 1.82
2336 2374 8.538409 ACTAAGGAAAAATTTTCATGTGATGC 57.462 30.769 18.70 0.79 0.00 3.91
2337 2375 8.370182 ACTAAGGAAAAATTTTCATGTGATGCT 58.630 29.630 18.70 2.93 0.00 3.79
2338 2376 7.662604 AAGGAAAAATTTTCATGTGATGCTC 57.337 32.000 18.70 0.00 0.00 4.26
2339 2377 6.761312 AGGAAAAATTTTCATGTGATGCTCA 58.239 32.000 18.70 0.00 0.00 4.26
2340 2378 7.218614 AGGAAAAATTTTCATGTGATGCTCAA 58.781 30.769 18.70 0.00 0.00 3.02
2341 2379 7.172019 AGGAAAAATTTTCATGTGATGCTCAAC 59.828 33.333 18.70 0.00 0.00 3.18
2342 2380 7.172019 GGAAAAATTTTCATGTGATGCTCAACT 59.828 33.333 18.70 0.00 0.00 3.16
2343 2381 7.647907 AAAATTTTCATGTGATGCTCAACTC 57.352 32.000 0.00 0.00 0.00 3.01
2344 2382 5.970317 ATTTTCATGTGATGCTCAACTCA 57.030 34.783 0.00 0.00 0.00 3.41
2345 2383 5.771153 TTTTCATGTGATGCTCAACTCAA 57.229 34.783 0.00 0.00 0.00 3.02
2346 2384 5.771153 TTTCATGTGATGCTCAACTCAAA 57.229 34.783 0.00 0.00 0.00 2.69
2347 2385 5.771153 TTCATGTGATGCTCAACTCAAAA 57.229 34.783 0.00 0.00 0.00 2.44
2348 2386 5.970317 TCATGTGATGCTCAACTCAAAAT 57.030 34.783 0.00 0.00 0.00 1.82
2349 2387 5.946298 TCATGTGATGCTCAACTCAAAATC 58.054 37.500 0.00 0.00 0.00 2.17
2350 2388 4.771590 TGTGATGCTCAACTCAAAATCC 57.228 40.909 0.00 0.00 0.00 3.01
2351 2389 4.401022 TGTGATGCTCAACTCAAAATCCT 58.599 39.130 0.00 0.00 0.00 3.24
2352 2390 5.559770 TGTGATGCTCAACTCAAAATCCTA 58.440 37.500 0.00 0.00 0.00 2.94
2353 2391 5.412594 TGTGATGCTCAACTCAAAATCCTAC 59.587 40.000 0.00 0.00 0.00 3.18
2354 2392 5.412594 GTGATGCTCAACTCAAAATCCTACA 59.587 40.000 0.00 0.00 0.00 2.74
2355 2393 5.412594 TGATGCTCAACTCAAAATCCTACAC 59.587 40.000 0.00 0.00 0.00 2.90
2356 2394 4.072131 TGCTCAACTCAAAATCCTACACC 58.928 43.478 0.00 0.00 0.00 4.16
2357 2395 4.202461 TGCTCAACTCAAAATCCTACACCT 60.202 41.667 0.00 0.00 0.00 4.00
2358 2396 5.012664 TGCTCAACTCAAAATCCTACACCTA 59.987 40.000 0.00 0.00 0.00 3.08
2359 2397 5.351740 GCTCAACTCAAAATCCTACACCTAC 59.648 44.000 0.00 0.00 0.00 3.18
2360 2398 5.801380 TCAACTCAAAATCCTACACCTACC 58.199 41.667 0.00 0.00 0.00 3.18
2361 2399 5.308497 TCAACTCAAAATCCTACACCTACCA 59.692 40.000 0.00 0.00 0.00 3.25
2362 2400 5.836024 ACTCAAAATCCTACACCTACCAA 57.164 39.130 0.00 0.00 0.00 3.67
2363 2401 6.388619 ACTCAAAATCCTACACCTACCAAT 57.611 37.500 0.00 0.00 0.00 3.16
2364 2402 6.415573 ACTCAAAATCCTACACCTACCAATC 58.584 40.000 0.00 0.00 0.00 2.67
2365 2403 5.751586 TCAAAATCCTACACCTACCAATCC 58.248 41.667 0.00 0.00 0.00 3.01
2366 2404 4.790718 AAATCCTACACCTACCAATCCC 57.209 45.455 0.00 0.00 0.00 3.85
2367 2405 3.726837 ATCCTACACCTACCAATCCCT 57.273 47.619 0.00 0.00 0.00 4.20
2368 2406 3.502051 TCCTACACCTACCAATCCCTT 57.498 47.619 0.00 0.00 0.00 3.95
2369 2407 3.381335 TCCTACACCTACCAATCCCTTC 58.619 50.000 0.00 0.00 0.00 3.46
2370 2408 2.102588 CCTACACCTACCAATCCCTTCG 59.897 54.545 0.00 0.00 0.00 3.79
2371 2409 1.946984 ACACCTACCAATCCCTTCGA 58.053 50.000 0.00 0.00 0.00 3.71
2372 2410 1.831736 ACACCTACCAATCCCTTCGAG 59.168 52.381 0.00 0.00 0.00 4.04
2373 2411 1.831736 CACCTACCAATCCCTTCGAGT 59.168 52.381 0.00 0.00 0.00 4.18
2374 2412 1.831736 ACCTACCAATCCCTTCGAGTG 59.168 52.381 0.00 0.00 36.31 3.51
2375 2413 2.108168 CCTACCAATCCCTTCGAGTGA 58.892 52.381 0.00 0.00 38.92 3.41
2376 2414 2.500098 CCTACCAATCCCTTCGAGTGAA 59.500 50.000 0.00 0.00 38.92 3.18
2388 2426 5.869753 CTTCGAGTGAAGTCATTGGAAAT 57.130 39.130 3.57 0.00 45.38 2.17
2389 2427 5.862811 CTTCGAGTGAAGTCATTGGAAATC 58.137 41.667 3.57 0.00 45.38 2.17
2390 2428 5.152623 TCGAGTGAAGTCATTGGAAATCT 57.847 39.130 0.00 0.00 0.00 2.40
2391 2429 5.171476 TCGAGTGAAGTCATTGGAAATCTC 58.829 41.667 0.00 0.00 0.00 2.75
2392 2430 4.931601 CGAGTGAAGTCATTGGAAATCTCA 59.068 41.667 0.00 0.00 0.00 3.27
2393 2431 5.583854 CGAGTGAAGTCATTGGAAATCTCAT 59.416 40.000 0.00 0.00 0.00 2.90
2394 2432 6.758416 CGAGTGAAGTCATTGGAAATCTCATA 59.242 38.462 0.00 0.00 0.00 2.15
2395 2433 7.254252 CGAGTGAAGTCATTGGAAATCTCATAC 60.254 40.741 0.00 0.00 0.00 2.39
2396 2434 7.397221 AGTGAAGTCATTGGAAATCTCATACA 58.603 34.615 0.00 0.00 0.00 2.29
2397 2435 7.551974 AGTGAAGTCATTGGAAATCTCATACAG 59.448 37.037 0.00 0.00 0.00 2.74
2398 2436 7.335422 GTGAAGTCATTGGAAATCTCATACAGT 59.665 37.037 0.00 0.00 0.00 3.55
2399 2437 7.884877 TGAAGTCATTGGAAATCTCATACAGTT 59.115 33.333 0.00 0.00 0.00 3.16
2400 2438 8.641498 AAGTCATTGGAAATCTCATACAGTTT 57.359 30.769 0.00 0.00 0.00 2.66
2401 2439 9.739276 AAGTCATTGGAAATCTCATACAGTTTA 57.261 29.630 0.00 0.00 0.00 2.01
2402 2440 9.388506 AGTCATTGGAAATCTCATACAGTTTAG 57.611 33.333 0.00 0.00 0.00 1.85
2403 2441 9.167311 GTCATTGGAAATCTCATACAGTTTAGT 57.833 33.333 0.00 0.00 0.00 2.24
2404 2442 9.383519 TCATTGGAAATCTCATACAGTTTAGTC 57.616 33.333 0.00 0.00 0.00 2.59
2405 2443 9.166173 CATTGGAAATCTCATACAGTTTAGTCA 57.834 33.333 0.00 0.00 0.00 3.41
2406 2444 9.739276 ATTGGAAATCTCATACAGTTTAGTCAA 57.261 29.630 0.00 0.00 0.00 3.18
2407 2445 8.777865 TGGAAATCTCATACAGTTTAGTCAAG 57.222 34.615 0.00 0.00 0.00 3.02
2408 2446 8.375506 TGGAAATCTCATACAGTTTAGTCAAGT 58.624 33.333 0.00 0.00 0.00 3.16
2409 2447 9.220767 GGAAATCTCATACAGTTTAGTCAAGTT 57.779 33.333 0.00 0.00 0.00 2.66
2414 2452 9.477484 TCTCATACAGTTTAGTCAAGTTTCTTC 57.523 33.333 0.00 0.00 0.00 2.87
2415 2453 9.261180 CTCATACAGTTTAGTCAAGTTTCTTCA 57.739 33.333 0.00 0.00 0.00 3.02
2416 2454 9.261180 TCATACAGTTTAGTCAAGTTTCTTCAG 57.739 33.333 0.00 0.00 0.00 3.02
2417 2455 9.046296 CATACAGTTTAGTCAAGTTTCTTCAGT 57.954 33.333 0.00 0.00 0.00 3.41
2418 2456 7.308782 ACAGTTTAGTCAAGTTTCTTCAGTG 57.691 36.000 0.00 0.00 0.00 3.66
2419 2457 7.103641 ACAGTTTAGTCAAGTTTCTTCAGTGA 58.896 34.615 0.00 0.00 0.00 3.41
2420 2458 7.064728 ACAGTTTAGTCAAGTTTCTTCAGTGAC 59.935 37.037 0.00 0.00 39.09 3.67
2421 2459 7.064609 CAGTTTAGTCAAGTTTCTTCAGTGACA 59.935 37.037 0.00 0.00 40.83 3.58
2422 2460 7.278868 AGTTTAGTCAAGTTTCTTCAGTGACAG 59.721 37.037 0.00 0.00 40.83 3.51
2423 2461 5.344743 AGTCAAGTTTCTTCAGTGACAGA 57.655 39.130 0.00 0.00 40.83 3.41
2424 2462 5.355596 AGTCAAGTTTCTTCAGTGACAGAG 58.644 41.667 0.00 0.00 40.83 3.35
2425 2463 5.127845 AGTCAAGTTTCTTCAGTGACAGAGA 59.872 40.000 0.00 0.00 40.83 3.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 9.289782 GAGGGAATTAAGATGCAAGTATGTTAT 57.710 33.333 0.00 0.00 0.00 1.89
79 80 8.331740 TGAGTATTTGGAGAAGATGAAGGATTT 58.668 33.333 0.00 0.00 0.00 2.17
102 103 2.499289 AGCTCCACAAGTACAGGATGAG 59.501 50.000 0.00 0.00 39.69 2.90
109 110 7.791029 TGATATATCAAAGCTCCACAAGTACA 58.209 34.615 13.12 0.00 33.08 2.90
178 179 9.259832 AGAAGCAAAATATTTATTTGGGAGAGT 57.740 29.630 0.01 0.00 38.04 3.24
238 240 2.420129 GGCCAGCCTCGATTAAGAGAAA 60.420 50.000 0.00 0.00 40.57 2.52
248 250 2.257409 GAAGAATGGGCCAGCCTCGA 62.257 60.000 13.78 0.00 36.10 4.04
251 253 2.220786 CTGGAAGAATGGGCCAGCCT 62.221 60.000 13.78 8.62 42.30 4.58
286 288 3.555586 GGCTAAATGCATGGGCCTAAATG 60.556 47.826 22.54 5.96 45.15 2.32
301 303 1.147608 TGGCATGGCTATGGGCTAAAT 59.852 47.619 21.08 0.00 41.46 1.40
305 307 2.519441 CTGGCATGGCTATGGGCT 59.481 61.111 21.08 0.00 41.46 5.19
311 313 0.628522 TAAAAGGGCTGGCATGGCTA 59.371 50.000 21.08 6.05 0.00 3.93
338 340 1.481871 TAGCTTTAGGTCAGGGACGG 58.518 55.000 0.00 0.00 32.65 4.79
345 347 5.394883 CGGGATTAGTGTTAGCTTTAGGTCA 60.395 44.000 0.00 0.00 0.00 4.02
360 362 1.962100 GAGGGTTCGATCGGGATTAGT 59.038 52.381 16.41 0.00 0.00 2.24
364 366 1.749334 GCTGAGGGTTCGATCGGGAT 61.749 60.000 16.41 0.00 0.00 3.85
365 367 2.423898 GCTGAGGGTTCGATCGGGA 61.424 63.158 16.41 1.21 0.00 5.14
390 392 0.392729 GAACGAGAGGGAGAGGACGA 60.393 60.000 0.00 0.00 0.00 4.20
429 431 4.240103 TGGGGATCCAGCGATGCG 62.240 66.667 15.23 0.00 37.70 4.73
453 455 0.106719 AGGAAGAGAGCGAGAGGAGG 60.107 60.000 0.00 0.00 0.00 4.30
462 464 0.107945 ATCGGCACAAGGAAGAGAGC 60.108 55.000 0.00 0.00 0.00 4.09
473 475 4.504596 GCCATGGGGATCGGCACA 62.505 66.667 15.13 0.00 45.52 4.57
494 496 2.760385 CAGGAGGAGGTCGGGGTC 60.760 72.222 0.00 0.00 0.00 4.46
525 527 1.527380 GGTGCCCCAACGAGAACAA 60.527 57.895 0.00 0.00 0.00 2.83
527 529 1.966451 CTGGTGCCCCAACGAGAAC 60.966 63.158 0.00 0.00 41.27 3.01
529 531 4.329545 GCTGGTGCCCCAACGAGA 62.330 66.667 0.00 0.00 41.27 4.04
544 546 3.971702 GAGGCTGGGGTGGTTGCT 61.972 66.667 0.00 0.00 0.00 3.91
548 550 4.270153 TGAGGAGGCTGGGGTGGT 62.270 66.667 0.00 0.00 0.00 4.16
569 571 2.914097 GGCTGGGCTGTTGCTTGT 60.914 61.111 0.00 0.00 39.59 3.16
570 572 3.688159 GGGCTGGGCTGTTGCTTG 61.688 66.667 0.00 0.00 39.59 4.01
597 599 1.300233 GAGCGACGGGAGGCAATAG 60.300 63.158 0.00 0.00 38.29 1.73
599 601 4.162690 GGAGCGACGGGAGGCAAT 62.163 66.667 0.00 0.00 38.29 3.56
643 645 4.794439 CGGCAGCCATCGACGACA 62.794 66.667 13.30 0.00 0.00 4.35
648 650 3.974835 ATTGCACGGCAGCCATCGA 62.975 57.895 13.30 0.00 40.61 3.59
649 651 3.511595 ATTGCACGGCAGCCATCG 61.512 61.111 13.30 0.00 40.61 3.84
720 728 1.984570 CTTGAGGACAGGCCGAGGA 60.985 63.158 0.00 0.00 43.43 3.71
730 738 0.035343 GGCCTTGGGTACTTGAGGAC 60.035 60.000 0.00 6.20 0.00 3.85
736 744 2.763902 GCAGGGCCTTGGGTACTT 59.236 61.111 17.71 0.00 0.00 2.24
739 747 3.399181 CTCGCAGGGCCTTGGGTA 61.399 66.667 27.72 15.46 33.22 3.69
763 771 3.334054 GAGGGGAGGCAGGCAAGT 61.334 66.667 0.00 0.00 0.00 3.16
766 774 4.804420 ATCGAGGGGAGGCAGGCA 62.804 66.667 0.00 0.00 0.00 4.75
770 778 2.764128 GTGGATCGAGGGGAGGCA 60.764 66.667 0.00 0.00 0.00 4.75
874 882 3.382832 CAAGGTCCGAGGCGAGGT 61.383 66.667 0.00 0.00 0.00 3.85
1004 1013 1.006688 GGTGGAATTTTTGCCGCGT 60.007 52.632 4.92 0.00 35.54 6.01
1008 1017 0.389817 GCCGAGGTGGAATTTTTGCC 60.390 55.000 0.00 0.00 42.00 4.52
1014 1023 1.244019 GCAAGTGCCGAGGTGGAATT 61.244 55.000 0.00 0.00 42.00 2.17
1058 1070 2.031919 TGGTCTTGGCGTGCGAAT 59.968 55.556 0.00 0.00 0.00 3.34
1089 1106 4.710865 TCCCGTATCAACATGGTGTAGTTA 59.289 41.667 11.27 0.00 0.00 2.24
1130 1147 3.249080 GTCGGAAAAACCATGTTCTTCGA 59.751 43.478 0.00 0.00 38.90 3.71
1152 1169 5.123344 CGGTCTTGATAAAACAAAGGGGTAG 59.877 44.000 0.00 0.00 0.00 3.18
1167 1184 2.418746 CGAGGGAATTGACGGTCTTGAT 60.419 50.000 9.88 0.00 0.00 2.57
1181 1198 2.257371 CGCTTGTCGTCGAGGGAA 59.743 61.111 8.02 0.00 39.48 3.97
1450 1469 4.497674 CGACAGTAGTGGTACTAGCAATCC 60.498 50.000 1.92 0.00 37.40 3.01
1475 1494 5.057843 AGTAGTGGTATTATCGGTCCTCA 57.942 43.478 0.00 0.00 0.00 3.86
1487 1506 3.950395 GACGGTAGTGGAAGTAGTGGTAT 59.050 47.826 0.00 0.00 0.00 2.73
1621 1640 3.998341 GCGGTTATACCTTCAAAGTGTGA 59.002 43.478 0.00 0.00 35.66 3.58
1853 1887 0.937304 ATGCCACGACAACATATCGC 59.063 50.000 0.00 0.00 43.46 4.58
1886 1920 3.903281 AAATGGGTGCCATGGCGGT 62.903 57.895 30.87 12.32 44.40 5.68
1901 1935 3.758300 GTCGCCATGACGAAATGAAAAT 58.242 40.909 5.44 0.00 44.93 1.82
1986 2024 2.383442 ATCACTACGGGGCACTAGAT 57.617 50.000 0.00 0.00 0.00 1.98
1987 2025 2.154567 AATCACTACGGGGCACTAGA 57.845 50.000 0.00 0.00 0.00 2.43
1988 2026 2.936498 CAAAATCACTACGGGGCACTAG 59.064 50.000 0.00 0.00 0.00 2.57
1989 2027 2.355310 CCAAAATCACTACGGGGCACTA 60.355 50.000 0.00 0.00 0.00 2.74
1990 2028 1.613255 CCAAAATCACTACGGGGCACT 60.613 52.381 0.00 0.00 0.00 4.40
1991 2029 0.808755 CCAAAATCACTACGGGGCAC 59.191 55.000 0.00 0.00 0.00 5.01
1992 2030 0.402504 ACCAAAATCACTACGGGGCA 59.597 50.000 0.00 0.00 0.00 5.36
1993 2031 0.808755 CACCAAAATCACTACGGGGC 59.191 55.000 0.00 0.00 0.00 5.80
1994 2032 2.194201 ACACCAAAATCACTACGGGG 57.806 50.000 0.00 0.00 0.00 5.73
1995 2033 4.938832 TCAATACACCAAAATCACTACGGG 59.061 41.667 0.00 0.00 0.00 5.28
1996 2034 6.370442 TCTTCAATACACCAAAATCACTACGG 59.630 38.462 0.00 0.00 0.00 4.02
1997 2035 7.117812 AGTCTTCAATACACCAAAATCACTACG 59.882 37.037 0.00 0.00 0.00 3.51
1998 2036 8.324163 AGTCTTCAATACACCAAAATCACTAC 57.676 34.615 0.00 0.00 0.00 2.73
1999 2037 8.918202 AAGTCTTCAATACACCAAAATCACTA 57.082 30.769 0.00 0.00 0.00 2.74
2000 2038 7.823745 AAGTCTTCAATACACCAAAATCACT 57.176 32.000 0.00 0.00 0.00 3.41
2004 2042 9.975218 ACCTATAAGTCTTCAATACACCAAAAT 57.025 29.630 0.00 0.00 0.00 1.82
2005 2043 9.802039 AACCTATAAGTCTTCAATACACCAAAA 57.198 29.630 0.00 0.00 0.00 2.44
2009 2047 9.543783 CCTTAACCTATAAGTCTTCAATACACC 57.456 37.037 0.00 0.00 0.00 4.16
2010 2048 9.543783 CCCTTAACCTATAAGTCTTCAATACAC 57.456 37.037 0.00 0.00 0.00 2.90
2011 2049 9.496710 TCCCTTAACCTATAAGTCTTCAATACA 57.503 33.333 0.00 0.00 0.00 2.29
2012 2050 9.761504 GTCCCTTAACCTATAAGTCTTCAATAC 57.238 37.037 0.00 0.00 0.00 1.89
2013 2051 9.725206 AGTCCCTTAACCTATAAGTCTTCAATA 57.275 33.333 0.00 0.00 0.00 1.90
2014 2052 8.487028 CAGTCCCTTAACCTATAAGTCTTCAAT 58.513 37.037 0.00 0.00 0.00 2.57
2015 2053 7.676893 TCAGTCCCTTAACCTATAAGTCTTCAA 59.323 37.037 0.00 0.00 0.00 2.69
2016 2054 7.186972 TCAGTCCCTTAACCTATAAGTCTTCA 58.813 38.462 0.00 0.00 0.00 3.02
2017 2055 7.657023 TCAGTCCCTTAACCTATAAGTCTTC 57.343 40.000 0.00 0.00 0.00 2.87
2018 2056 7.419172 GCATCAGTCCCTTAACCTATAAGTCTT 60.419 40.741 0.00 0.00 0.00 3.01
2019 2057 6.042208 GCATCAGTCCCTTAACCTATAAGTCT 59.958 42.308 0.00 0.00 0.00 3.24
2020 2058 6.224584 GCATCAGTCCCTTAACCTATAAGTC 58.775 44.000 0.00 0.00 0.00 3.01
2021 2059 5.221461 CGCATCAGTCCCTTAACCTATAAGT 60.221 44.000 0.00 0.00 0.00 2.24
2022 2060 5.221461 ACGCATCAGTCCCTTAACCTATAAG 60.221 44.000 0.00 0.00 0.00 1.73
2023 2061 4.652421 ACGCATCAGTCCCTTAACCTATAA 59.348 41.667 0.00 0.00 0.00 0.98
2024 2062 4.220724 ACGCATCAGTCCCTTAACCTATA 58.779 43.478 0.00 0.00 0.00 1.31
2025 2063 3.039011 ACGCATCAGTCCCTTAACCTAT 58.961 45.455 0.00 0.00 0.00 2.57
2026 2064 2.463752 ACGCATCAGTCCCTTAACCTA 58.536 47.619 0.00 0.00 0.00 3.08
2027 2065 1.276622 ACGCATCAGTCCCTTAACCT 58.723 50.000 0.00 0.00 0.00 3.50
2028 2066 2.109425 AACGCATCAGTCCCTTAACC 57.891 50.000 0.00 0.00 0.00 2.85
2029 2067 2.812011 ACAAACGCATCAGTCCCTTAAC 59.188 45.455 0.00 0.00 0.00 2.01
2030 2068 2.811431 CACAAACGCATCAGTCCCTTAA 59.189 45.455 0.00 0.00 0.00 1.85
2031 2069 2.037902 TCACAAACGCATCAGTCCCTTA 59.962 45.455 0.00 0.00 0.00 2.69
2032 2070 1.202758 TCACAAACGCATCAGTCCCTT 60.203 47.619 0.00 0.00 0.00 3.95
2033 2071 0.396435 TCACAAACGCATCAGTCCCT 59.604 50.000 0.00 0.00 0.00 4.20
2034 2072 0.798776 CTCACAAACGCATCAGTCCC 59.201 55.000 0.00 0.00 0.00 4.46
2035 2073 1.195448 CACTCACAAACGCATCAGTCC 59.805 52.381 0.00 0.00 0.00 3.85
2036 2074 1.867233 ACACTCACAAACGCATCAGTC 59.133 47.619 0.00 0.00 0.00 3.51
2037 2075 1.953559 ACACTCACAAACGCATCAGT 58.046 45.000 0.00 0.00 0.00 3.41
2038 2076 2.799978 TGTACACTCACAAACGCATCAG 59.200 45.455 0.00 0.00 0.00 2.90
2039 2077 2.542178 GTGTACACTCACAAACGCATCA 59.458 45.455 18.92 0.00 38.12 3.07
2040 2078 2.542178 TGTGTACACTCACAAACGCATC 59.458 45.455 25.60 0.00 43.92 3.91
2041 2079 2.543848 CTGTGTACACTCACAAACGCAT 59.456 45.455 25.60 0.00 45.70 4.73
2042 2080 1.930503 CTGTGTACACTCACAAACGCA 59.069 47.619 25.60 1.63 45.70 5.24
2043 2081 1.260561 CCTGTGTACACTCACAAACGC 59.739 52.381 25.60 0.00 45.70 4.84
2044 2082 2.538449 GACCTGTGTACACTCACAAACG 59.462 50.000 25.60 7.41 45.70 3.60
2045 2083 3.793559 AGACCTGTGTACACTCACAAAC 58.206 45.455 25.60 11.05 45.70 2.93
2046 2084 5.801531 ATAGACCTGTGTACACTCACAAA 57.198 39.130 25.60 8.96 45.70 2.83
2047 2085 6.492429 ACTTATAGACCTGTGTACACTCACAA 59.508 38.462 25.60 5.22 45.70 3.33
2048 2086 6.008331 ACTTATAGACCTGTGTACACTCACA 58.992 40.000 25.60 5.66 44.54 3.58
2049 2087 6.374894 AGACTTATAGACCTGTGTACACTCAC 59.625 42.308 25.60 14.26 38.63 3.51
2050 2088 6.482524 AGACTTATAGACCTGTGTACACTCA 58.517 40.000 25.60 6.77 0.00 3.41
2051 2089 8.561212 CATAGACTTATAGACCTGTGTACACTC 58.439 40.741 25.60 15.39 0.00 3.51
2052 2090 8.272889 TCATAGACTTATAGACCTGTGTACACT 58.727 37.037 25.60 6.76 0.00 3.55
2053 2091 8.447924 TCATAGACTTATAGACCTGTGTACAC 57.552 38.462 19.36 19.36 0.00 2.90
2054 2092 7.720074 CCTCATAGACTTATAGACCTGTGTACA 59.280 40.741 0.00 0.00 0.00 2.90
2055 2093 7.937942 TCCTCATAGACTTATAGACCTGTGTAC 59.062 40.741 0.00 0.00 0.00 2.90
2056 2094 8.042286 TCCTCATAGACTTATAGACCTGTGTA 57.958 38.462 0.00 0.00 0.00 2.90
2057 2095 6.912426 TCCTCATAGACTTATAGACCTGTGT 58.088 40.000 0.00 0.00 0.00 3.72
2058 2096 8.415950 AATCCTCATAGACTTATAGACCTGTG 57.584 38.462 0.00 0.00 0.00 3.66
2059 2097 9.440761 AAAATCCTCATAGACTTATAGACCTGT 57.559 33.333 0.00 0.00 0.00 4.00
2060 2098 9.703892 CAAAATCCTCATAGACTTATAGACCTG 57.296 37.037 0.00 0.00 0.00 4.00
2061 2099 9.661954 TCAAAATCCTCATAGACTTATAGACCT 57.338 33.333 0.00 0.00 0.00 3.85
2083 2121 9.760077 GGGTCGACTTTCTCTATAAATATCAAA 57.240 33.333 16.46 0.00 0.00 2.69
2084 2122 8.365647 GGGGTCGACTTTCTCTATAAATATCAA 58.634 37.037 16.46 0.00 0.00 2.57
2085 2123 7.728981 AGGGGTCGACTTTCTCTATAAATATCA 59.271 37.037 16.46 0.00 0.00 2.15
2086 2124 8.124808 AGGGGTCGACTTTCTCTATAAATATC 57.875 38.462 16.46 0.00 0.00 1.63
2087 2125 9.597681 TTAGGGGTCGACTTTCTCTATAAATAT 57.402 33.333 16.46 0.00 0.00 1.28
2088 2126 9.425248 TTTAGGGGTCGACTTTCTCTATAAATA 57.575 33.333 16.46 0.00 0.00 1.40
2089 2127 7.909485 TTAGGGGTCGACTTTCTCTATAAAT 57.091 36.000 16.46 0.00 0.00 1.40
2090 2128 7.722949 TTTAGGGGTCGACTTTCTCTATAAA 57.277 36.000 16.46 7.18 0.00 1.40
2091 2129 7.722949 TTTTAGGGGTCGACTTTCTCTATAA 57.277 36.000 16.46 7.17 0.00 0.98
2092 2130 7.722949 TTTTTAGGGGTCGACTTTCTCTATA 57.277 36.000 16.46 1.12 0.00 1.31
2093 2131 6.616237 TTTTTAGGGGTCGACTTTCTCTAT 57.384 37.500 16.46 0.00 0.00 1.98
2094 2132 6.211986 TCATTTTTAGGGGTCGACTTTCTCTA 59.788 38.462 16.46 5.65 0.00 2.43
2095 2133 4.968971 TTTTTAGGGGTCGACTTTCTCT 57.031 40.909 16.46 6.72 0.00 3.10
2096 2134 5.243207 TCATTTTTAGGGGTCGACTTTCTC 58.757 41.667 16.46 0.00 0.00 2.87
2097 2135 5.237236 TCATTTTTAGGGGTCGACTTTCT 57.763 39.130 16.46 12.43 0.00 2.52
2098 2136 5.472478 ACTTCATTTTTAGGGGTCGACTTTC 59.528 40.000 16.46 5.58 0.00 2.62
2099 2137 5.382616 ACTTCATTTTTAGGGGTCGACTTT 58.617 37.500 16.46 3.95 0.00 2.66
2100 2138 4.981812 ACTTCATTTTTAGGGGTCGACTT 58.018 39.130 16.46 4.32 0.00 3.01
2101 2139 4.635699 ACTTCATTTTTAGGGGTCGACT 57.364 40.909 16.46 0.00 0.00 4.18
2102 2140 5.001874 AGAACTTCATTTTTAGGGGTCGAC 58.998 41.667 7.13 7.13 0.00 4.20
2103 2141 5.237236 AGAACTTCATTTTTAGGGGTCGA 57.763 39.130 0.00 0.00 0.00 4.20
2104 2142 5.390567 CGAAGAACTTCATTTTTAGGGGTCG 60.391 44.000 13.72 0.00 39.46 4.79
2105 2143 5.704053 TCGAAGAACTTCATTTTTAGGGGTC 59.296 40.000 13.72 0.00 39.46 4.46
2106 2144 5.472478 GTCGAAGAACTTCATTTTTAGGGGT 59.528 40.000 13.72 0.00 39.69 4.95
2107 2145 5.705905 AGTCGAAGAACTTCATTTTTAGGGG 59.294 40.000 13.72 0.00 39.69 4.79
2108 2146 6.426937 TCAGTCGAAGAACTTCATTTTTAGGG 59.573 38.462 13.72 0.00 39.69 3.53
2109 2147 7.421530 TCAGTCGAAGAACTTCATTTTTAGG 57.578 36.000 13.72 0.00 39.69 2.69
2126 2164 4.235360 GGAAATTCGAAGTCTTCAGTCGA 58.765 43.478 12.99 1.92 41.72 4.20
2127 2165 3.059570 CGGAAATTCGAAGTCTTCAGTCG 59.940 47.826 12.99 0.00 36.12 4.18
2128 2166 4.235360 TCGGAAATTCGAAGTCTTCAGTC 58.765 43.478 12.99 0.00 36.12 3.51
2129 2167 4.252971 TCGGAAATTCGAAGTCTTCAGT 57.747 40.909 12.99 0.00 36.12 3.41
2138 2176 3.430895 CGGAAAGTCTTCGGAAATTCGAA 59.569 43.478 0.00 0.00 45.34 3.71
2139 2177 2.991190 CGGAAAGTCTTCGGAAATTCGA 59.009 45.455 0.00 0.00 34.62 3.71
2140 2178 2.991190 TCGGAAAGTCTTCGGAAATTCG 59.009 45.455 0.00 0.00 37.80 3.34
2141 2179 4.689345 TCTTCGGAAAGTCTTCGGAAATTC 59.311 41.667 8.57 0.00 45.11 2.17
2142 2180 4.451435 GTCTTCGGAAAGTCTTCGGAAATT 59.549 41.667 8.57 0.00 45.11 1.82
2143 2181 3.995048 GTCTTCGGAAAGTCTTCGGAAAT 59.005 43.478 8.57 0.00 45.11 2.17
2144 2182 3.069158 AGTCTTCGGAAAGTCTTCGGAAA 59.931 43.478 8.57 0.51 45.11 3.13
2145 2183 2.626743 AGTCTTCGGAAAGTCTTCGGAA 59.373 45.455 7.40 7.40 44.23 4.30
2146 2184 2.236766 AGTCTTCGGAAAGTCTTCGGA 58.763 47.619 0.00 0.00 38.66 4.55
2147 2185 2.726832 AGTCTTCGGAAAGTCTTCGG 57.273 50.000 0.00 0.00 33.95 4.30
2148 2186 4.049186 TCAAAGTCTTCGGAAAGTCTTCG 58.951 43.478 0.00 0.00 39.11 3.79
2149 2187 5.986004 TTCAAAGTCTTCGGAAAGTCTTC 57.014 39.130 0.00 0.00 39.11 2.87
2150 2188 6.364945 CTTTCAAAGTCTTCGGAAAGTCTT 57.635 37.500 20.88 0.00 40.92 3.01
2151 2189 5.993106 CTTTCAAAGTCTTCGGAAAGTCT 57.007 39.130 20.88 0.00 40.64 3.24
2155 2193 5.878116 TCTTCACTTTCAAAGTCTTCGGAAA 59.122 36.000 0.00 10.33 40.46 3.13
2156 2194 5.424757 TCTTCACTTTCAAAGTCTTCGGAA 58.575 37.500 0.00 0.00 40.46 4.30
2157 2195 5.018539 TCTTCACTTTCAAAGTCTTCGGA 57.981 39.130 0.00 0.00 40.46 4.55
2158 2196 5.734855 TTCTTCACTTTCAAAGTCTTCGG 57.265 39.130 0.00 0.00 40.46 4.30
2159 2197 7.166473 CCAATTTCTTCACTTTCAAAGTCTTCG 59.834 37.037 0.00 0.00 40.46 3.79
2160 2198 7.976175 ACCAATTTCTTCACTTTCAAAGTCTTC 59.024 33.333 0.00 0.00 40.46 2.87
2161 2199 7.761249 CACCAATTTCTTCACTTTCAAAGTCTT 59.239 33.333 0.00 0.00 40.46 3.01
2162 2200 7.093771 ACACCAATTTCTTCACTTTCAAAGTCT 60.094 33.333 0.00 0.00 40.46 3.24
2163 2201 7.009540 CACACCAATTTCTTCACTTTCAAAGTC 59.990 37.037 0.00 0.00 40.46 3.01
2164 2202 6.813152 CACACCAATTTCTTCACTTTCAAAGT 59.187 34.615 0.00 0.00 44.06 2.66
2165 2203 7.035004 TCACACCAATTTCTTCACTTTCAAAG 58.965 34.615 0.00 0.00 0.00 2.77
2166 2204 6.929625 TCACACCAATTTCTTCACTTTCAAA 58.070 32.000 0.00 0.00 0.00 2.69
2167 2205 6.522625 TCACACCAATTTCTTCACTTTCAA 57.477 33.333 0.00 0.00 0.00 2.69
2168 2206 6.239008 GGATCACACCAATTTCTTCACTTTCA 60.239 38.462 0.00 0.00 0.00 2.69
2169 2207 6.015940 AGGATCACACCAATTTCTTCACTTTC 60.016 38.462 0.00 0.00 0.00 2.62
2170 2208 5.835280 AGGATCACACCAATTTCTTCACTTT 59.165 36.000 0.00 0.00 0.00 2.66
2171 2209 5.242393 CAGGATCACACCAATTTCTTCACTT 59.758 40.000 0.00 0.00 0.00 3.16
2172 2210 4.763793 CAGGATCACACCAATTTCTTCACT 59.236 41.667 0.00 0.00 0.00 3.41
2173 2211 4.761739 TCAGGATCACACCAATTTCTTCAC 59.238 41.667 0.00 0.00 0.00 3.18
2174 2212 4.984295 TCAGGATCACACCAATTTCTTCA 58.016 39.130 0.00 0.00 0.00 3.02
2175 2213 5.964958 TTCAGGATCACACCAATTTCTTC 57.035 39.130 0.00 0.00 0.00 2.87
2176 2214 6.324770 AGTTTTCAGGATCACACCAATTTCTT 59.675 34.615 0.00 0.00 0.00 2.52
2177 2215 5.835280 AGTTTTCAGGATCACACCAATTTCT 59.165 36.000 0.00 0.00 0.00 2.52
2178 2216 6.089249 AGTTTTCAGGATCACACCAATTTC 57.911 37.500 0.00 0.00 0.00 2.17
2179 2217 6.282930 CAAGTTTTCAGGATCACACCAATTT 58.717 36.000 0.00 0.00 0.00 1.82
2180 2218 5.221501 CCAAGTTTTCAGGATCACACCAATT 60.222 40.000 0.00 0.00 0.00 2.32
2181 2219 4.281688 CCAAGTTTTCAGGATCACACCAAT 59.718 41.667 0.00 0.00 0.00 3.16
2182 2220 3.636300 CCAAGTTTTCAGGATCACACCAA 59.364 43.478 0.00 0.00 0.00 3.67
2183 2221 3.221771 CCAAGTTTTCAGGATCACACCA 58.778 45.455 0.00 0.00 0.00 4.17
2184 2222 3.222603 ACCAAGTTTTCAGGATCACACC 58.777 45.455 0.00 0.00 0.00 4.16
2185 2223 6.206634 TGAATACCAAGTTTTCAGGATCACAC 59.793 38.462 0.00 0.00 30.94 3.82
2186 2224 6.303054 TGAATACCAAGTTTTCAGGATCACA 58.697 36.000 0.00 0.00 30.94 3.58
2187 2225 6.817765 TGAATACCAAGTTTTCAGGATCAC 57.182 37.500 0.00 0.00 30.94 3.06
2188 2226 7.148255 CGAATGAATACCAAGTTTTCAGGATCA 60.148 37.037 6.73 0.00 37.05 2.92
2189 2227 7.065803 TCGAATGAATACCAAGTTTTCAGGATC 59.934 37.037 6.73 0.00 37.05 3.36
2190 2228 6.884295 TCGAATGAATACCAAGTTTTCAGGAT 59.116 34.615 6.73 0.00 37.05 3.24
2191 2229 6.234920 TCGAATGAATACCAAGTTTTCAGGA 58.765 36.000 6.73 2.62 37.05 3.86
2192 2230 6.403636 CCTCGAATGAATACCAAGTTTTCAGG 60.404 42.308 6.73 0.00 37.05 3.86
2193 2231 6.371548 TCCTCGAATGAATACCAAGTTTTCAG 59.628 38.462 6.73 0.00 37.05 3.02
2194 2232 6.234920 TCCTCGAATGAATACCAAGTTTTCA 58.765 36.000 3.63 3.63 37.73 2.69
2195 2233 6.737254 TCCTCGAATGAATACCAAGTTTTC 57.263 37.500 0.00 0.00 0.00 2.29
2196 2234 7.703058 ATTCCTCGAATGAATACCAAGTTTT 57.297 32.000 7.81 0.00 30.42 2.43
2197 2235 8.840321 CATATTCCTCGAATGAATACCAAGTTT 58.160 33.333 15.49 1.08 37.48 2.66
2198 2236 8.210946 TCATATTCCTCGAATGAATACCAAGTT 58.789 33.333 15.49 1.61 37.48 2.66
2199 2237 7.735917 TCATATTCCTCGAATGAATACCAAGT 58.264 34.615 15.49 2.14 37.48 3.16
2200 2238 8.607441 TTCATATTCCTCGAATGAATACCAAG 57.393 34.615 15.49 8.97 37.48 3.61
2201 2239 8.210946 ACTTCATATTCCTCGAATGAATACCAA 58.789 33.333 15.49 11.41 38.55 3.67
2202 2240 7.657354 CACTTCATATTCCTCGAATGAATACCA 59.343 37.037 15.49 6.26 38.55 3.25
2203 2241 7.657761 ACACTTCATATTCCTCGAATGAATACC 59.342 37.037 15.49 0.00 38.55 2.73
2204 2242 8.491152 CACACTTCATATTCCTCGAATGAATAC 58.509 37.037 15.49 0.00 38.55 1.89
2205 2243 8.421002 TCACACTTCATATTCCTCGAATGAATA 58.579 33.333 15.51 15.51 38.55 1.75
2206 2244 7.275183 TCACACTTCATATTCCTCGAATGAAT 58.725 34.615 9.31 11.15 38.55 2.57
2207 2245 6.639563 TCACACTTCATATTCCTCGAATGAA 58.360 36.000 8.70 8.70 37.30 2.57
2208 2246 6.220726 TCACACTTCATATTCCTCGAATGA 57.779 37.500 0.00 0.00 33.95 2.57
2209 2247 6.758416 TCTTCACACTTCATATTCCTCGAATG 59.242 38.462 0.00 0.00 33.95 2.67
2210 2248 6.878317 TCTTCACACTTCATATTCCTCGAAT 58.122 36.000 0.00 0.00 36.20 3.34
2211 2249 6.280855 TCTTCACACTTCATATTCCTCGAA 57.719 37.500 0.00 0.00 0.00 3.71
2212 2250 5.914898 TCTTCACACTTCATATTCCTCGA 57.085 39.130 0.00 0.00 0.00 4.04
2213 2251 7.545362 AATTCTTCACACTTCATATTCCTCG 57.455 36.000 0.00 0.00 0.00 4.63
2214 2252 9.565213 CAAAATTCTTCACACTTCATATTCCTC 57.435 33.333 0.00 0.00 0.00 3.71
2215 2253 9.082313 ACAAAATTCTTCACACTTCATATTCCT 57.918 29.630 0.00 0.00 0.00 3.36
2216 2254 9.696917 AACAAAATTCTTCACACTTCATATTCC 57.303 29.630 0.00 0.00 0.00 3.01
2220 2258 9.232082 CGAAAACAAAATTCTTCACACTTCATA 57.768 29.630 0.00 0.00 0.00 2.15
2221 2259 7.759433 ACGAAAACAAAATTCTTCACACTTCAT 59.241 29.630 0.00 0.00 0.00 2.57
2222 2260 7.087639 ACGAAAACAAAATTCTTCACACTTCA 58.912 30.769 0.00 0.00 0.00 3.02
2223 2261 7.506296 ACGAAAACAAAATTCTTCACACTTC 57.494 32.000 0.00 0.00 0.00 3.01
2224 2262 8.241367 ACTACGAAAACAAAATTCTTCACACTT 58.759 29.630 0.00 0.00 0.00 3.16
2225 2263 7.758495 ACTACGAAAACAAAATTCTTCACACT 58.242 30.769 0.00 0.00 0.00 3.55
2226 2264 7.964545 ACTACGAAAACAAAATTCTTCACAC 57.035 32.000 0.00 0.00 0.00 3.82
2227 2265 8.973835 AAACTACGAAAACAAAATTCTTCACA 57.026 26.923 0.00 0.00 0.00 3.58
2245 2283 9.931210 ACTCAAGAAACAGAAAATTAAACTACG 57.069 29.630 0.00 0.00 0.00 3.51
2256 2294 9.621629 TGTTTCCTATAACTCAAGAAACAGAAA 57.378 29.630 11.42 0.00 46.74 2.52
2261 2299 8.379457 ACAGTGTTTCCTATAACTCAAGAAAC 57.621 34.615 6.92 6.92 44.09 2.78
2262 2300 9.485206 GTACAGTGTTTCCTATAACTCAAGAAA 57.515 33.333 0.00 0.00 0.00 2.52
2263 2301 8.867097 AGTACAGTGTTTCCTATAACTCAAGAA 58.133 33.333 0.00 0.00 0.00 2.52
2264 2302 8.304596 CAGTACAGTGTTTCCTATAACTCAAGA 58.695 37.037 0.00 0.00 0.00 3.02
2265 2303 8.088981 ACAGTACAGTGTTTCCTATAACTCAAG 58.911 37.037 0.00 0.00 0.00 3.02
2266 2304 7.959175 ACAGTACAGTGTTTCCTATAACTCAA 58.041 34.615 0.00 0.00 0.00 3.02
2267 2305 7.534723 ACAGTACAGTGTTTCCTATAACTCA 57.465 36.000 0.00 0.00 0.00 3.41
2268 2306 9.918630 TTAACAGTACAGTGTTTCCTATAACTC 57.081 33.333 0.00 0.00 41.06 3.01
2271 2309 9.715121 CCTTTAACAGTACAGTGTTTCCTATAA 57.285 33.333 0.00 0.00 41.06 0.98
2272 2310 8.316214 CCCTTTAACAGTACAGTGTTTCCTATA 58.684 37.037 0.00 0.00 41.06 1.31
2273 2311 7.166167 CCCTTTAACAGTACAGTGTTTCCTAT 58.834 38.462 0.00 0.00 41.06 2.57
2274 2312 6.464749 CCCCTTTAACAGTACAGTGTTTCCTA 60.465 42.308 0.00 0.00 41.06 2.94
2275 2313 5.374071 CCCTTTAACAGTACAGTGTTTCCT 58.626 41.667 0.00 0.00 41.06 3.36
2276 2314 4.517832 CCCCTTTAACAGTACAGTGTTTCC 59.482 45.833 0.00 0.00 41.06 3.13
2277 2315 4.517832 CCCCCTTTAACAGTACAGTGTTTC 59.482 45.833 0.00 0.00 41.06 2.78
2278 2316 4.079615 ACCCCCTTTAACAGTACAGTGTTT 60.080 41.667 0.00 0.00 41.06 2.83
2279 2317 3.460712 ACCCCCTTTAACAGTACAGTGTT 59.539 43.478 0.00 7.54 43.22 3.32
2280 2318 3.050835 ACCCCCTTTAACAGTACAGTGT 58.949 45.455 0.00 0.00 0.00 3.55
2281 2319 3.671716 GACCCCCTTTAACAGTACAGTG 58.328 50.000 0.00 0.00 0.00 3.66
2282 2320 2.301009 CGACCCCCTTTAACAGTACAGT 59.699 50.000 0.00 0.00 0.00 3.55
2283 2321 2.564062 TCGACCCCCTTTAACAGTACAG 59.436 50.000 0.00 0.00 0.00 2.74
2284 2322 2.564062 CTCGACCCCCTTTAACAGTACA 59.436 50.000 0.00 0.00 0.00 2.90
2285 2323 2.093816 CCTCGACCCCCTTTAACAGTAC 60.094 54.545 0.00 0.00 0.00 2.73
2286 2324 2.181975 CCTCGACCCCCTTTAACAGTA 58.818 52.381 0.00 0.00 0.00 2.74
2287 2325 0.981943 CCTCGACCCCCTTTAACAGT 59.018 55.000 0.00 0.00 0.00 3.55
2288 2326 1.272807 TCCTCGACCCCCTTTAACAG 58.727 55.000 0.00 0.00 0.00 3.16
2289 2327 1.732117 TTCCTCGACCCCCTTTAACA 58.268 50.000 0.00 0.00 0.00 2.41
2290 2328 2.865119 TTTCCTCGACCCCCTTTAAC 57.135 50.000 0.00 0.00 0.00 2.01
2291 2329 4.106324 AGTATTTCCTCGACCCCCTTTAA 58.894 43.478 0.00 0.00 0.00 1.52
2292 2330 3.727948 AGTATTTCCTCGACCCCCTTTA 58.272 45.455 0.00 0.00 0.00 1.85
2293 2331 2.558974 AGTATTTCCTCGACCCCCTTT 58.441 47.619 0.00 0.00 0.00 3.11
2294 2332 2.265526 AGTATTTCCTCGACCCCCTT 57.734 50.000 0.00 0.00 0.00 3.95
2295 2333 3.306613 CTTAGTATTTCCTCGACCCCCT 58.693 50.000 0.00 0.00 0.00 4.79
2296 2334 2.367894 CCTTAGTATTTCCTCGACCCCC 59.632 54.545 0.00 0.00 0.00 5.40
2297 2335 3.303049 TCCTTAGTATTTCCTCGACCCC 58.697 50.000 0.00 0.00 0.00 4.95
2298 2336 5.349061 TTTCCTTAGTATTTCCTCGACCC 57.651 43.478 0.00 0.00 0.00 4.46
2299 2337 7.860918 ATTTTTCCTTAGTATTTCCTCGACC 57.139 36.000 0.00 0.00 0.00 4.79
2310 2348 9.638239 GCATCACATGAAAATTTTTCCTTAGTA 57.362 29.630 17.05 0.57 0.00 1.82
2311 2349 8.370182 AGCATCACATGAAAATTTTTCCTTAGT 58.630 29.630 17.05 8.81 0.00 2.24
2312 2350 8.767478 AGCATCACATGAAAATTTTTCCTTAG 57.233 30.769 17.05 8.30 0.00 2.18
2313 2351 8.366401 TGAGCATCACATGAAAATTTTTCCTTA 58.634 29.630 17.05 1.87 42.56 2.69
2314 2352 7.218614 TGAGCATCACATGAAAATTTTTCCTT 58.781 30.769 17.05 4.48 42.56 3.36
2315 2353 6.761312 TGAGCATCACATGAAAATTTTTCCT 58.239 32.000 17.05 6.63 42.56 3.36
2332 2370 5.163713 GGTGTAGGATTTTGAGTTGAGCATC 60.164 44.000 0.00 0.00 0.00 3.91
2333 2371 4.702131 GGTGTAGGATTTTGAGTTGAGCAT 59.298 41.667 0.00 0.00 0.00 3.79
2334 2372 4.072131 GGTGTAGGATTTTGAGTTGAGCA 58.928 43.478 0.00 0.00 0.00 4.26
2335 2373 4.327680 AGGTGTAGGATTTTGAGTTGAGC 58.672 43.478 0.00 0.00 0.00 4.26
2336 2374 5.875359 GGTAGGTGTAGGATTTTGAGTTGAG 59.125 44.000 0.00 0.00 0.00 3.02
2337 2375 5.308497 TGGTAGGTGTAGGATTTTGAGTTGA 59.692 40.000 0.00 0.00 0.00 3.18
2338 2376 5.556915 TGGTAGGTGTAGGATTTTGAGTTG 58.443 41.667 0.00 0.00 0.00 3.16
2339 2377 5.836024 TGGTAGGTGTAGGATTTTGAGTT 57.164 39.130 0.00 0.00 0.00 3.01
2340 2378 5.836024 TTGGTAGGTGTAGGATTTTGAGT 57.164 39.130 0.00 0.00 0.00 3.41
2341 2379 5.823045 GGATTGGTAGGTGTAGGATTTTGAG 59.177 44.000 0.00 0.00 0.00 3.02
2342 2380 5.339695 GGGATTGGTAGGTGTAGGATTTTGA 60.340 44.000 0.00 0.00 0.00 2.69
2343 2381 4.887655 GGGATTGGTAGGTGTAGGATTTTG 59.112 45.833 0.00 0.00 0.00 2.44
2344 2382 4.794067 AGGGATTGGTAGGTGTAGGATTTT 59.206 41.667 0.00 0.00 0.00 1.82
2345 2383 4.380791 AGGGATTGGTAGGTGTAGGATTT 58.619 43.478 0.00 0.00 0.00 2.17
2346 2384 4.022359 AGGGATTGGTAGGTGTAGGATT 57.978 45.455 0.00 0.00 0.00 3.01
2347 2385 3.726837 AGGGATTGGTAGGTGTAGGAT 57.273 47.619 0.00 0.00 0.00 3.24
2348 2386 3.381335 GAAGGGATTGGTAGGTGTAGGA 58.619 50.000 0.00 0.00 0.00 2.94
2349 2387 2.102588 CGAAGGGATTGGTAGGTGTAGG 59.897 54.545 0.00 0.00 0.00 3.18
2350 2388 3.028850 TCGAAGGGATTGGTAGGTGTAG 58.971 50.000 0.00 0.00 0.00 2.74
2351 2389 3.028850 CTCGAAGGGATTGGTAGGTGTA 58.971 50.000 0.00 0.00 0.00 2.90
2352 2390 1.831736 CTCGAAGGGATTGGTAGGTGT 59.168 52.381 0.00 0.00 0.00 4.16
2353 2391 1.831736 ACTCGAAGGGATTGGTAGGTG 59.168 52.381 0.00 0.00 0.00 4.00
2354 2392 1.831736 CACTCGAAGGGATTGGTAGGT 59.168 52.381 0.00 0.00 0.00 3.08
2355 2393 2.108168 TCACTCGAAGGGATTGGTAGG 58.892 52.381 0.00 0.00 0.00 3.18
2356 2394 3.786635 CTTCACTCGAAGGGATTGGTAG 58.213 50.000 0.00 0.00 44.25 3.18
2357 2395 3.887621 CTTCACTCGAAGGGATTGGTA 57.112 47.619 0.00 0.00 44.25 3.25
2358 2396 2.770164 CTTCACTCGAAGGGATTGGT 57.230 50.000 0.00 0.00 44.25 3.67
2367 2405 5.551233 AGATTTCCAATGACTTCACTCGAA 58.449 37.500 0.00 0.00 0.00 3.71
2368 2406 5.152623 AGATTTCCAATGACTTCACTCGA 57.847 39.130 0.00 0.00 0.00 4.04
2369 2407 4.931601 TGAGATTTCCAATGACTTCACTCG 59.068 41.667 0.00 0.00 0.00 4.18
2370 2408 6.998968 ATGAGATTTCCAATGACTTCACTC 57.001 37.500 0.00 0.00 0.00 3.51
2371 2409 7.397221 TGTATGAGATTTCCAATGACTTCACT 58.603 34.615 0.00 0.00 0.00 3.41
2372 2410 7.335422 ACTGTATGAGATTTCCAATGACTTCAC 59.665 37.037 0.00 0.00 0.00 3.18
2373 2411 7.397221 ACTGTATGAGATTTCCAATGACTTCA 58.603 34.615 0.00 0.00 0.00 3.02
2374 2412 7.856145 ACTGTATGAGATTTCCAATGACTTC 57.144 36.000 0.00 0.00 0.00 3.01
2375 2413 8.641498 AAACTGTATGAGATTTCCAATGACTT 57.359 30.769 0.00 0.00 0.00 3.01
2376 2414 9.388506 CTAAACTGTATGAGATTTCCAATGACT 57.611 33.333 0.00 0.00 0.00 3.41
2377 2415 9.167311 ACTAAACTGTATGAGATTTCCAATGAC 57.833 33.333 0.00 0.00 0.00 3.06
2378 2416 9.383519 GACTAAACTGTATGAGATTTCCAATGA 57.616 33.333 0.00 0.00 0.00 2.57
2379 2417 9.166173 TGACTAAACTGTATGAGATTTCCAATG 57.834 33.333 0.00 0.00 0.00 2.82
2380 2418 9.739276 TTGACTAAACTGTATGAGATTTCCAAT 57.261 29.630 0.00 0.00 0.00 3.16
2381 2419 9.219603 CTTGACTAAACTGTATGAGATTTCCAA 57.780 33.333 0.00 0.00 0.00 3.53
2382 2420 8.375506 ACTTGACTAAACTGTATGAGATTTCCA 58.624 33.333 0.00 0.00 0.00 3.53
2383 2421 8.779354 ACTTGACTAAACTGTATGAGATTTCC 57.221 34.615 0.00 0.00 0.00 3.13
2388 2426 9.477484 GAAGAAACTTGACTAAACTGTATGAGA 57.523 33.333 0.00 0.00 0.00 3.27
2389 2427 9.261180 TGAAGAAACTTGACTAAACTGTATGAG 57.739 33.333 0.00 0.00 0.00 2.90
2390 2428 9.261180 CTGAAGAAACTTGACTAAACTGTATGA 57.739 33.333 0.00 0.00 0.00 2.15
2391 2429 9.046296 ACTGAAGAAACTTGACTAAACTGTATG 57.954 33.333 0.00 0.00 0.00 2.39
2392 2430 9.046296 CACTGAAGAAACTTGACTAAACTGTAT 57.954 33.333 0.00 0.00 0.00 2.29
2393 2431 8.255206 TCACTGAAGAAACTTGACTAAACTGTA 58.745 33.333 0.00 0.00 0.00 2.74
2394 2432 7.064728 GTCACTGAAGAAACTTGACTAAACTGT 59.935 37.037 0.00 0.00 34.89 3.55
2395 2433 7.064609 TGTCACTGAAGAAACTTGACTAAACTG 59.935 37.037 0.00 0.00 37.94 3.16
2396 2434 7.103641 TGTCACTGAAGAAACTTGACTAAACT 58.896 34.615 0.00 0.00 37.94 2.66
2397 2435 7.277981 TCTGTCACTGAAGAAACTTGACTAAAC 59.722 37.037 0.00 0.00 37.94 2.01
2398 2436 7.327975 TCTGTCACTGAAGAAACTTGACTAAA 58.672 34.615 0.00 0.00 37.94 1.85
2399 2437 6.873997 TCTGTCACTGAAGAAACTTGACTAA 58.126 36.000 0.00 0.00 37.94 2.24
2400 2438 6.321435 TCTCTGTCACTGAAGAAACTTGACTA 59.679 38.462 0.00 0.00 37.94 2.59
2401 2439 5.127845 TCTCTGTCACTGAAGAAACTTGACT 59.872 40.000 0.00 0.00 37.94 3.41
2402 2440 5.352284 TCTCTGTCACTGAAGAAACTTGAC 58.648 41.667 0.00 0.00 37.65 3.18
2403 2441 5.598416 TCTCTGTCACTGAAGAAACTTGA 57.402 39.130 0.00 0.00 0.00 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.