Multiple sequence alignment - TraesCS4A01G160400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G160400 chr4A 100.000 5815 0 0 1 5815 344030780 344036594 0.000000e+00 10739.0
1 TraesCS4A01G160400 chr4D 93.979 5414 209 65 1 5381 256551526 256556855 0.000000e+00 8083.0
2 TraesCS4A01G160400 chr4B 96.195 2917 90 11 2133 5036 351875100 351878008 0.000000e+00 4752.0
3 TraesCS4A01G160400 chr4B 92.850 2000 86 21 1 1983 351872659 351874618 0.000000e+00 2848.0
4 TraesCS4A01G160400 chr4B 85.448 268 26 10 5116 5380 351878079 351878336 3.450000e-67 267.0
5 TraesCS4A01G160400 chr4B 96.250 160 3 2 1976 2134 351874861 351875018 5.780000e-65 259.0
6 TraesCS4A01G160400 chr4B 100.000 55 0 0 1976 2030 351874804 351874858 1.030000e-17 102.0
7 TraesCS4A01G160400 chr4B 89.796 49 3 1 355 403 670760122 670760076 1.750000e-05 62.1
8 TraesCS4A01G160400 chr1A 83.636 220 28 8 192 406 504106307 504106523 3.550000e-47 200.0
9 TraesCS4A01G160400 chr1A 85.484 62 5 4 353 412 41210564 41210623 1.750000e-05 62.1
10 TraesCS4A01G160400 chr1A 85.484 62 5 4 353 412 41476553 41476494 1.750000e-05 62.1
11 TraesCS4A01G160400 chr1A 88.462 52 3 3 353 403 542299266 542299217 6.290000e-05 60.2
12 TraesCS4A01G160400 chr3B 79.904 209 28 7 198 401 805318779 805318580 2.180000e-29 141.0
13 TraesCS4A01G160400 chr3A 77.273 220 44 6 5345 5560 131422963 131422746 2.200000e-24 124.0
14 TraesCS4A01G160400 chr2A 74.144 263 49 12 5296 5552 654024562 654024313 2.230000e-14 91.6
15 TraesCS4A01G160400 chr2A 90.385 52 2 3 353 403 686652640 686652689 1.350000e-06 65.8
16 TraesCS4A01G160400 chr7D 77.193 114 18 4 5447 5560 576055708 576055603 6.290000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G160400 chr4A 344030780 344036594 5814 False 10739.0 10739 100.0000 1 5815 1 chr4A.!!$F1 5814
1 TraesCS4A01G160400 chr4D 256551526 256556855 5329 False 8083.0 8083 93.9790 1 5381 1 chr4D.!!$F1 5380
2 TraesCS4A01G160400 chr4B 351872659 351878336 5677 False 1645.6 4752 94.1486 1 5380 5 chr4B.!!$F1 5379

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
775 777 0.469705 TGGCAAGGCAAACTGTGGAT 60.470 50.0 0.00 0.0 0.00 3.41 F
1062 1064 0.107410 ACTCGTGCCTTTGTTCACCA 60.107 50.0 0.00 0.0 0.00 4.17 F
1281 1295 1.177401 GCTTTGGCCTCAAACCCTAG 58.823 55.0 3.32 0.0 37.89 3.02 F
2385 2738 2.439507 TCATGCCTTTCTCCCAGTATCC 59.560 50.0 0.00 0.0 0.00 2.59 F
4045 4401 0.396435 ATGCTGTTGGACTCCGTTGA 59.604 50.0 0.00 0.0 0.00 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1862 1879 1.069049 CCAGGCAAAACTCCAAAGGTG 59.931 52.381 0.00 0.0 0.00 4.00 R
2050 2317 1.633945 AGGACCCCGCTTTTATTCACT 59.366 47.619 0.00 0.0 0.00 3.41 R
2708 3064 3.317430 AGAGTACTCGTGTCGAACCTTTT 59.683 43.478 17.07 0.0 34.74 2.27 R
4201 4557 1.272212 AGCAACAAAATAACCAGCCCG 59.728 47.619 0.00 0.0 0.00 6.13 R
5664 6051 0.250770 GTGACCCCTCAACCAACTCC 60.251 60.000 0.00 0.0 0.00 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
61 62 1.251251 GCCTGCAGACAACAAGGATT 58.749 50.000 17.39 0.00 0.00 3.01
116 117 4.008933 GTGCCACCGAGACTGCCT 62.009 66.667 0.00 0.00 0.00 4.75
146 147 3.198872 CGCCTAAGATCTTTGAGAACCC 58.801 50.000 14.36 0.00 0.00 4.11
241 242 5.506708 AGGAGTTTGTTACCTCTGTGTTTT 58.493 37.500 0.00 0.00 0.00 2.43
242 243 5.589050 AGGAGTTTGTTACCTCTGTGTTTTC 59.411 40.000 0.00 0.00 0.00 2.29
284 285 8.708742 GCGAGTATTATATGCATTGTTGACTTA 58.291 33.333 3.54 0.00 0.00 2.24
344 345 0.804989 GTCCCTGATCAAGTTTGCCG 59.195 55.000 0.00 0.00 0.00 5.69
383 384 3.413327 TCTTTATTAGCCCGTTGCAACA 58.587 40.909 28.01 8.91 44.83 3.33
423 424 7.373441 GCTAGTGTAAAATAATGTTAGCAAGCG 59.627 37.037 0.00 0.00 34.09 4.68
775 777 0.469705 TGGCAAGGCAAACTGTGGAT 60.470 50.000 0.00 0.00 0.00 3.41
815 817 7.499895 CCTTAAGTAAAAGTCCTGTGGTTGTAA 59.500 37.037 0.97 0.00 0.00 2.41
816 818 8.983702 TTAAGTAAAAGTCCTGTGGTTGTAAT 57.016 30.769 0.00 0.00 0.00 1.89
888 890 3.821033 ACAAGTAGAAACCAATCAGGCAC 59.179 43.478 0.00 0.00 43.14 5.01
928 930 3.921021 CCACTATATTCATTCGCCGAGAC 59.079 47.826 0.00 0.00 0.00 3.36
991 993 9.337396 CCTGGTATGCTCTAATTTGTGTTAATA 57.663 33.333 0.00 0.00 0.00 0.98
1047 1049 5.346522 GGGTAATACTCCTGTGTTTACTCG 58.653 45.833 0.00 0.00 32.03 4.18
1048 1050 5.105595 GGGTAATACTCCTGTGTTTACTCGT 60.106 44.000 0.00 0.00 32.03 4.18
1049 1051 5.803967 GGTAATACTCCTGTGTTTACTCGTG 59.196 44.000 0.00 0.00 32.03 4.35
1052 1054 1.000955 CTCCTGTGTTTACTCGTGCCT 59.999 52.381 0.00 0.00 0.00 4.75
1058 1060 3.064271 TGTGTTTACTCGTGCCTTTGTTC 59.936 43.478 0.00 0.00 0.00 3.18
1059 1061 3.064271 GTGTTTACTCGTGCCTTTGTTCA 59.936 43.478 0.00 0.00 0.00 3.18
1060 1062 3.064271 TGTTTACTCGTGCCTTTGTTCAC 59.936 43.478 0.00 0.00 0.00 3.18
1061 1063 1.873698 TACTCGTGCCTTTGTTCACC 58.126 50.000 0.00 0.00 0.00 4.02
1062 1064 0.107410 ACTCGTGCCTTTGTTCACCA 60.107 50.000 0.00 0.00 0.00 4.17
1237 1251 4.317488 CTTGTGCAATAAAAGGTGGCATT 58.683 39.130 0.00 0.00 36.79 3.56
1281 1295 1.177401 GCTTTGGCCTCAAACCCTAG 58.823 55.000 3.32 0.00 37.89 3.02
1284 1298 2.579410 TTGGCCTCAAACCCTAGTTC 57.421 50.000 3.32 0.00 34.19 3.01
1293 1307 6.399743 CCTCAAACCCTAGTTCTTCTAACTC 58.600 44.000 0.00 0.00 34.19 3.01
1301 1315 5.862860 CCTAGTTCTTCTAACTCGGTTTGTC 59.137 44.000 0.00 0.00 30.88 3.18
1328 1342 5.878332 ATCAACATTTCATGCGACACTTA 57.122 34.783 0.00 0.00 0.00 2.24
1337 1351 9.075519 CATTTCATGCGACACTTATACAAATTT 57.924 29.630 0.00 0.00 0.00 1.82
1382 1397 8.143193 TGTTGTTTGCATTTGTCTTGATATCTT 58.857 29.630 3.98 0.00 0.00 2.40
1384 1399 9.545105 TTGTTTGCATTTGTCTTGATATCTTTT 57.455 25.926 3.98 0.00 0.00 2.27
1451 1467 5.732647 CCTGTTGAACGATATTTGCTTTACG 59.267 40.000 0.00 0.00 0.00 3.18
1515 1531 7.225784 TCTGTTATTGCCTGCAAATTCTTTA 57.774 32.000 8.84 0.00 39.55 1.85
1516 1532 7.090173 TCTGTTATTGCCTGCAAATTCTTTAC 58.910 34.615 8.84 0.00 39.55 2.01
1517 1533 5.861251 TGTTATTGCCTGCAAATTCTTTACG 59.139 36.000 8.84 0.00 39.55 3.18
1518 1534 4.519540 ATTGCCTGCAAATTCTTTACGT 57.480 36.364 8.84 0.00 39.55 3.57
1519 1535 5.637006 ATTGCCTGCAAATTCTTTACGTA 57.363 34.783 8.84 0.00 39.55 3.57
1521 1537 4.517453 TTGCCTGCAAATTCTTTACGTAGT 59.483 37.500 1.31 0.00 37.51 2.73
1522 1538 4.517453 TGCCTGCAAATTCTTTACGTAGTT 59.483 37.500 0.00 0.00 37.78 2.24
1527 1543 8.328864 CCTGCAAATTCTTTACGTAGTTATCTC 58.671 37.037 0.00 0.00 37.78 2.75
1670 1686 8.160434 AGATTTATCTGGATAATGCTGGAGAT 57.840 34.615 4.20 0.00 35.42 2.75
1869 1886 8.178313 AGGTAGTTTTAGAAAATCCACCTTTG 57.822 34.615 10.02 0.00 34.94 2.77
1908 1925 2.481289 AGCTAAGGACTTTCAGTGCC 57.519 50.000 0.00 0.00 37.25 5.01
2049 2316 5.698545 GCGAGATAAAGGAAGAGTTGCATAT 59.301 40.000 0.00 0.00 0.00 1.78
2050 2317 6.868864 GCGAGATAAAGGAAGAGTTGCATATA 59.131 38.462 0.00 0.00 0.00 0.86
2186 2538 3.850122 AAAACGCCTTTGCCTTCTATC 57.150 42.857 0.00 0.00 0.00 2.08
2385 2738 2.439507 TCATGCCTTTCTCCCAGTATCC 59.560 50.000 0.00 0.00 0.00 2.59
2494 2847 7.955918 AGTGTCCTTTTCTGAATTTTATGCTT 58.044 30.769 0.00 0.00 0.00 3.91
2618 2972 8.458573 TGGCTTTGAATTCTGTCTAGTTAAAA 57.541 30.769 7.05 0.00 0.00 1.52
2650 3004 6.288294 TGTCTTAAGTGCACAATTCACTACT 58.712 36.000 21.04 0.00 43.36 2.57
2763 3119 4.162131 TGCATGCTAGAAGATTGGTAGACA 59.838 41.667 20.33 0.00 0.00 3.41
2798 3154 5.625921 ATTGTTTGCTGTTTTTGCTGTTT 57.374 30.435 0.00 0.00 0.00 2.83
2801 3157 4.083590 TGTTTGCTGTTTTTGCTGTTTTCC 60.084 37.500 0.00 0.00 0.00 3.13
2804 3160 4.322567 TGCTGTTTTTGCTGTTTTCCTTT 58.677 34.783 0.00 0.00 0.00 3.11
2805 3161 4.759183 TGCTGTTTTTGCTGTTTTCCTTTT 59.241 33.333 0.00 0.00 0.00 2.27
2822 3178 8.503458 TTTCCTTTTTCATTTTGCAATCTGAA 57.497 26.923 16.14 16.14 0.00 3.02
3153 3509 4.398044 CGCAGGAGGCCTTTCTTAATAAAA 59.602 41.667 6.77 0.00 40.31 1.52
3177 3533 7.858052 AAGTCTTGAAAATGTTATGCGAAAG 57.142 32.000 0.00 0.00 0.00 2.62
3189 3545 1.878953 TGCGAAAGTTTCTCCAGTCC 58.121 50.000 13.56 0.00 0.00 3.85
3330 3686 4.112634 TCTTGTTGCCAAAGGGATAGTT 57.887 40.909 0.00 0.00 35.59 2.24
3491 3847 1.127582 GTCTGAGCATTTCACGTGAGC 59.872 52.381 19.11 18.37 0.00 4.26
3507 3863 3.661936 CGTGAGCTTTTAGACGCTGTTTC 60.662 47.826 0.00 0.00 36.45 2.78
3518 3874 3.496130 AGACGCTGTTTCTGTTGATTCAG 59.504 43.478 0.00 0.00 36.85 3.02
3541 3897 6.866770 CAGTTTCTTCATGTTCTCATTTGCAT 59.133 34.615 0.00 0.00 31.15 3.96
3581 3937 5.704888 TGTTTATTTTGTTACCGGCTGATG 58.295 37.500 0.00 0.00 0.00 3.07
3590 3946 5.549347 TGTTACCGGCTGATGTTTTTACTA 58.451 37.500 0.00 0.00 0.00 1.82
3595 3951 6.386654 ACCGGCTGATGTTTTTACTATTTTG 58.613 36.000 0.00 0.00 0.00 2.44
3637 3993 6.395629 TGACTAGCCTTGTTGAGTACAATAC 58.604 40.000 0.00 0.00 45.31 1.89
3875 4231 4.688021 CACTTAGGCAGGTAAGATCTGTC 58.312 47.826 0.00 0.00 37.14 3.51
3929 4285 7.657023 TCATAAGTCCTAGGGAAAGAAGTAC 57.343 40.000 9.46 0.00 31.38 2.73
3942 4298 7.016268 AGGGAAAGAAGTACATCTCAAGTAACA 59.984 37.037 0.26 0.00 0.00 2.41
4041 4397 1.238439 AACAATGCTGTTGGACTCCG 58.762 50.000 7.21 0.00 44.28 4.63
4045 4401 0.396435 ATGCTGTTGGACTCCGTTGA 59.604 50.000 0.00 0.00 0.00 3.18
4111 4467 5.526846 TGTCCTTACGAAACGGTAAATTTGT 59.473 36.000 0.00 0.00 32.39 2.83
4138 4494 7.500892 TCTGGCAAGTTACATAGAAGTTGAAAA 59.499 33.333 7.69 0.00 40.67 2.29
4208 4564 3.818787 GCATTGAGTGCGGGCTGG 61.819 66.667 0.00 0.00 45.23 4.85
4319 4675 2.122768 AGCTTAGGGCATCTGTAGCTT 58.877 47.619 0.00 0.00 39.91 3.74
4350 4706 4.475016 AGGCATGTAGTCCCTCTAAACAAT 59.525 41.667 0.00 0.00 0.00 2.71
4357 4713 8.197592 TGTAGTCCCTCTAAACAATTGTAAGA 57.802 34.615 12.39 15.88 0.00 2.10
4394 4750 6.603997 ACTTGAGGGAGTAACTACTAGTGATG 59.396 42.308 5.39 0.00 36.50 3.07
4434 4790 7.581213 TTCATCTTATTTGTTGTGTTGTCCT 57.419 32.000 0.00 0.00 0.00 3.85
4444 4800 5.724328 TGTTGTGTTGTCCTTTTGCATTTA 58.276 33.333 0.00 0.00 0.00 1.40
4822 5178 4.974501 AGAGGAGGAAGAATAAAGAGGCAT 59.025 41.667 0.00 0.00 0.00 4.40
4871 5227 0.106719 ATACCCCATGTTTGCGGAGG 60.107 55.000 0.00 0.00 0.00 4.30
4908 5264 7.437862 CCTTTTGCTGCTTATTACTGAACAAAA 59.562 33.333 0.00 0.00 34.44 2.44
4909 5265 7.692908 TTTGCTGCTTATTACTGAACAAAAC 57.307 32.000 0.00 0.00 0.00 2.43
4939 5295 0.522705 GCATGTGAGCATTGCTGTCG 60.523 55.000 17.51 1.01 39.88 4.35
4978 5344 3.559238 CAGGATTTGGAAGGAACGTTG 57.441 47.619 5.00 0.00 0.00 4.10
4987 5353 2.882761 GGAAGGAACGTTGCCTACTTTT 59.117 45.455 16.78 2.66 33.76 2.27
4988 5354 3.304458 GGAAGGAACGTTGCCTACTTTTG 60.304 47.826 16.78 0.00 33.76 2.44
4989 5355 2.927028 AGGAACGTTGCCTACTTTTGT 58.073 42.857 16.78 0.00 32.92 2.83
4990 5356 2.616842 AGGAACGTTGCCTACTTTTGTG 59.383 45.455 16.78 0.00 32.92 3.33
5049 5416 4.705023 GTGCACATTTTAACCCTGGACTAT 59.295 41.667 13.17 0.00 0.00 2.12
5050 5417 4.947388 TGCACATTTTAACCCTGGACTATC 59.053 41.667 0.00 0.00 0.00 2.08
5051 5418 5.193679 GCACATTTTAACCCTGGACTATCT 58.806 41.667 0.00 0.00 0.00 1.98
5052 5419 5.297029 GCACATTTTAACCCTGGACTATCTC 59.703 44.000 0.00 0.00 0.00 2.75
5053 5420 6.653989 CACATTTTAACCCTGGACTATCTCT 58.346 40.000 0.00 0.00 0.00 3.10
5054 5421 7.112779 CACATTTTAACCCTGGACTATCTCTT 58.887 38.462 0.00 0.00 0.00 2.85
5055 5422 7.281100 CACATTTTAACCCTGGACTATCTCTTC 59.719 40.741 0.00 0.00 0.00 2.87
5056 5423 6.945636 TTTTAACCCTGGACTATCTCTTCA 57.054 37.500 0.00 0.00 0.00 3.02
5057 5424 6.945636 TTTAACCCTGGACTATCTCTTCAA 57.054 37.500 0.00 0.00 0.00 2.69
5074 5441 5.547465 TCTTCAATTAAGAAGAGGCGAACA 58.453 37.500 4.53 0.00 46.62 3.18
5101 5468 7.504926 AGTTTATATTAACTGTCAGGGACCA 57.495 36.000 6.32 0.00 37.00 4.02
5107 5474 2.623418 ACTGTCAGGGACCATCTACA 57.377 50.000 4.53 0.00 0.00 2.74
5129 5514 1.267732 CGCTGGTGATTTGATTCTCGC 60.268 52.381 0.00 0.00 0.00 5.03
5163 5548 0.814457 GCTGTCCGATCAGTCTGAGT 59.186 55.000 8.82 0.00 37.70 3.41
5170 5555 1.392853 CGATCAGTCTGAGTGCTTTGC 59.607 52.381 8.82 0.00 0.00 3.68
5172 5557 2.627515 TCAGTCTGAGTGCTTTGCTT 57.372 45.000 7.63 0.00 0.00 3.91
5210 5595 0.740868 GGACGCTATCTGCAGTGCAA 60.741 55.000 20.22 10.64 43.06 4.08
5214 5599 1.787989 CGCTATCTGCAGTGCAAAACG 60.788 52.381 20.22 14.20 43.06 3.60
5224 5609 2.290367 CAGTGCAAAACGGTCTTCATGA 59.710 45.455 0.00 0.00 0.00 3.07
5230 5615 4.207019 GCAAAACGGTCTTCATGAACAAAG 59.793 41.667 3.38 0.00 31.33 2.77
5256 5641 3.754965 TCACAGCTGGTCAAAATAAGCT 58.245 40.909 19.93 0.00 46.70 3.74
5262 5647 7.599998 CACAGCTGGTCAAAATAAGCTTAAAAT 59.400 33.333 19.93 0.00 43.33 1.82
5332 5718 8.353684 TCAAATGAGCTTTGATAAACCGTAAAA 58.646 29.630 0.00 0.00 46.45 1.52
5333 5719 8.973378 CAAATGAGCTTTGATAAACCGTAAAAA 58.027 29.630 0.00 0.00 45.96 1.94
5334 5720 9.705290 AAATGAGCTTTGATAAACCGTAAAAAT 57.295 25.926 0.00 0.00 0.00 1.82
5335 5721 8.687824 ATGAGCTTTGATAAACCGTAAAAATG 57.312 30.769 0.00 0.00 0.00 2.32
5389 5776 9.238368 TGGGTAAACTTTGATAAATGTTCTAGG 57.762 33.333 0.00 0.00 0.00 3.02
5390 5777 9.239551 GGGTAAACTTTGATAAATGTTCTAGGT 57.760 33.333 0.00 0.00 0.00 3.08
5395 5782 9.965824 AACTTTGATAAATGTTCTAGGTGTTTG 57.034 29.630 0.00 0.00 0.00 2.93
5396 5783 8.082242 ACTTTGATAAATGTTCTAGGTGTTTGC 58.918 33.333 0.00 0.00 0.00 3.68
5397 5784 7.517614 TTGATAAATGTTCTAGGTGTTTGCA 57.482 32.000 0.00 0.00 0.00 4.08
5398 5785 7.517614 TGATAAATGTTCTAGGTGTTTGCAA 57.482 32.000 0.00 0.00 0.00 4.08
5399 5786 7.946207 TGATAAATGTTCTAGGTGTTTGCAAA 58.054 30.769 8.05 8.05 0.00 3.68
5400 5787 8.584157 TGATAAATGTTCTAGGTGTTTGCAAAT 58.416 29.630 16.21 1.29 0.00 2.32
5401 5788 9.423061 GATAAATGTTCTAGGTGTTTGCAAATT 57.577 29.630 16.21 3.23 0.00 1.82
5402 5789 9.777297 ATAAATGTTCTAGGTGTTTGCAAATTT 57.223 25.926 16.21 9.32 0.00 1.82
5403 5790 8.504812 AAATGTTCTAGGTGTTTGCAAATTTT 57.495 26.923 16.21 4.58 0.00 1.82
5404 5791 8.504812 AATGTTCTAGGTGTTTGCAAATTTTT 57.495 26.923 16.21 4.94 0.00 1.94
5405 5792 7.301068 TGTTCTAGGTGTTTGCAAATTTTTG 57.699 32.000 16.21 5.10 41.03 2.44
5406 5793 6.876257 TGTTCTAGGTGTTTGCAAATTTTTGT 59.124 30.769 16.21 1.38 40.24 2.83
5407 5794 7.064016 TGTTCTAGGTGTTTGCAAATTTTTGTC 59.936 33.333 16.21 0.73 40.24 3.18
5408 5795 6.634805 TCTAGGTGTTTGCAAATTTTTGTCA 58.365 32.000 16.21 3.64 40.24 3.58
5409 5796 7.271511 TCTAGGTGTTTGCAAATTTTTGTCAT 58.728 30.769 16.21 2.15 40.24 3.06
5410 5797 6.121613 AGGTGTTTGCAAATTTTTGTCATG 57.878 33.333 16.21 0.00 40.24 3.07
5411 5798 5.879223 AGGTGTTTGCAAATTTTTGTCATGA 59.121 32.000 16.21 0.00 40.24 3.07
5412 5799 6.037391 AGGTGTTTGCAAATTTTTGTCATGAG 59.963 34.615 16.21 0.00 40.24 2.90
5413 5800 6.036953 GGTGTTTGCAAATTTTTGTCATGAGA 59.963 34.615 16.21 0.00 40.24 3.27
5414 5801 7.254863 GGTGTTTGCAAATTTTTGTCATGAGAT 60.255 33.333 16.21 0.00 40.24 2.75
5415 5802 7.795272 GTGTTTGCAAATTTTTGTCATGAGATC 59.205 33.333 16.21 0.00 40.24 2.75
5416 5803 7.494952 TGTTTGCAAATTTTTGTCATGAGATCA 59.505 29.630 16.21 0.00 40.24 2.92
5417 5804 7.410800 TTGCAAATTTTTGTCATGAGATCAC 57.589 32.000 0.00 0.00 40.24 3.06
5418 5805 6.514063 TGCAAATTTTTGTCATGAGATCACA 58.486 32.000 0.00 0.00 40.24 3.58
5419 5806 7.156000 TGCAAATTTTTGTCATGAGATCACAT 58.844 30.769 0.00 0.00 40.24 3.21
5420 5807 7.658167 TGCAAATTTTTGTCATGAGATCACATT 59.342 29.630 2.55 0.00 40.24 2.71
5421 5808 9.142515 GCAAATTTTTGTCATGAGATCACATTA 57.857 29.630 2.55 0.00 40.24 1.90
5425 5812 9.850628 ATTTTTGTCATGAGATCACATTAGTTG 57.149 29.630 2.55 0.00 0.00 3.16
5426 5813 8.620116 TTTTGTCATGAGATCACATTAGTTGA 57.380 30.769 2.55 0.00 0.00 3.18
5427 5814 8.620116 TTTGTCATGAGATCACATTAGTTGAA 57.380 30.769 2.55 0.00 0.00 2.69
5428 5815 7.838771 TGTCATGAGATCACATTAGTTGAAG 57.161 36.000 2.55 0.00 0.00 3.02
5429 5816 6.820152 TGTCATGAGATCACATTAGTTGAAGG 59.180 38.462 2.55 0.00 0.00 3.46
5430 5817 6.820656 GTCATGAGATCACATTAGTTGAAGGT 59.179 38.462 2.55 0.00 30.42 3.50
5435 5822 3.559238 CACATTAGTTGAAGGTGTGGC 57.441 47.619 0.00 0.00 43.35 5.01
5436 5823 2.884012 CACATTAGTTGAAGGTGTGGCA 59.116 45.455 0.00 0.00 43.35 4.92
5437 5824 3.317711 CACATTAGTTGAAGGTGTGGCAA 59.682 43.478 0.00 0.00 43.35 4.52
5438 5825 3.957497 ACATTAGTTGAAGGTGTGGCAAA 59.043 39.130 0.00 0.00 28.89 3.68
5439 5826 4.404073 ACATTAGTTGAAGGTGTGGCAAAA 59.596 37.500 0.00 0.00 28.89 2.44
5440 5827 5.105146 ACATTAGTTGAAGGTGTGGCAAAAA 60.105 36.000 0.00 0.00 28.89 1.94
5460 5847 2.159327 AAAGGAGTGCTGCAAAATGC 57.841 45.000 2.77 0.00 45.29 3.56
5461 5848 1.335145 AAGGAGTGCTGCAAAATGCT 58.665 45.000 2.77 1.07 45.31 3.79
5462 5849 1.335145 AGGAGTGCTGCAAAATGCTT 58.665 45.000 2.77 0.00 45.31 3.91
5463 5850 1.690352 AGGAGTGCTGCAAAATGCTTT 59.310 42.857 2.77 0.00 45.31 3.51
5464 5851 2.103601 AGGAGTGCTGCAAAATGCTTTT 59.896 40.909 2.77 0.00 45.31 2.27
5482 5869 7.283625 TGCTTTTGAAAGTAGCATTTTAGGA 57.716 32.000 0.45 0.00 39.79 2.94
5483 5870 7.370383 TGCTTTTGAAAGTAGCATTTTAGGAG 58.630 34.615 0.45 0.00 39.79 3.69
5484 5871 6.309009 GCTTTTGAAAGTAGCATTTTAGGAGC 59.691 38.462 5.47 0.00 38.28 4.70
5485 5872 6.892658 TTTGAAAGTAGCATTTTAGGAGCA 57.107 33.333 0.00 0.00 0.00 4.26
5486 5873 7.466746 TTTGAAAGTAGCATTTTAGGAGCAT 57.533 32.000 0.00 0.00 0.00 3.79
5487 5874 6.683974 TGAAAGTAGCATTTTAGGAGCATC 57.316 37.500 0.00 0.00 0.00 3.91
5488 5875 6.179756 TGAAAGTAGCATTTTAGGAGCATCA 58.820 36.000 0.00 0.00 36.25 3.07
5489 5876 6.658816 TGAAAGTAGCATTTTAGGAGCATCAA 59.341 34.615 0.00 0.00 36.25 2.57
5490 5877 7.340232 TGAAAGTAGCATTTTAGGAGCATCAAT 59.660 33.333 0.00 0.00 36.25 2.57
5491 5878 7.651027 AAGTAGCATTTTAGGAGCATCAATT 57.349 32.000 0.00 0.00 36.25 2.32
5492 5879 7.651027 AGTAGCATTTTAGGAGCATCAATTT 57.349 32.000 0.00 0.00 36.25 1.82
5493 5880 8.071177 AGTAGCATTTTAGGAGCATCAATTTT 57.929 30.769 0.00 0.00 36.25 1.82
5494 5881 7.977853 AGTAGCATTTTAGGAGCATCAATTTTG 59.022 33.333 0.00 0.00 36.25 2.44
5495 5882 6.704310 AGCATTTTAGGAGCATCAATTTTGT 58.296 32.000 0.00 0.00 36.25 2.83
5496 5883 7.163441 AGCATTTTAGGAGCATCAATTTTGTT 58.837 30.769 0.00 0.00 36.25 2.83
5497 5884 7.662669 AGCATTTTAGGAGCATCAATTTTGTTT 59.337 29.630 0.00 0.00 36.25 2.83
5498 5885 7.959109 GCATTTTAGGAGCATCAATTTTGTTTC 59.041 33.333 0.00 0.00 36.25 2.78
5499 5886 8.991026 CATTTTAGGAGCATCAATTTTGTTTCA 58.009 29.630 0.00 0.00 36.25 2.69
5500 5887 9.729281 ATTTTAGGAGCATCAATTTTGTTTCAT 57.271 25.926 0.00 0.00 36.25 2.57
5501 5888 9.558396 TTTTAGGAGCATCAATTTTGTTTCATT 57.442 25.926 0.00 0.00 36.25 2.57
5502 5889 8.537049 TTAGGAGCATCAATTTTGTTTCATTG 57.463 30.769 0.00 0.00 36.25 2.82
5503 5890 5.935789 AGGAGCATCAATTTTGTTTCATTGG 59.064 36.000 0.00 0.00 36.25 3.16
5504 5891 5.702209 GGAGCATCAATTTTGTTTCATTGGT 59.298 36.000 0.00 0.00 36.25 3.67
5505 5892 6.128472 GGAGCATCAATTTTGTTTCATTGGTC 60.128 38.462 0.00 0.00 36.25 4.02
5506 5893 6.289834 AGCATCAATTTTGTTTCATTGGTCA 58.710 32.000 0.00 0.00 32.17 4.02
5507 5894 6.203338 AGCATCAATTTTGTTTCATTGGTCAC 59.797 34.615 0.00 0.00 32.17 3.67
5508 5895 6.018098 GCATCAATTTTGTTTCATTGGTCACA 60.018 34.615 0.00 0.00 32.17 3.58
5509 5896 7.466996 GCATCAATTTTGTTTCATTGGTCACAA 60.467 33.333 0.00 0.00 41.59 3.33
5510 5897 7.301068 TCAATTTTGTTTCATTGGTCACAAC 57.699 32.000 0.00 0.00 39.87 3.32
5511 5898 7.102346 TCAATTTTGTTTCATTGGTCACAACT 58.898 30.769 0.00 0.00 39.87 3.16
5512 5899 7.605691 TCAATTTTGTTTCATTGGTCACAACTT 59.394 29.630 0.00 0.00 39.87 2.66
5513 5900 6.959671 TTTTGTTTCATTGGTCACAACTTC 57.040 33.333 0.00 0.00 39.87 3.01
5514 5901 4.647424 TGTTTCATTGGTCACAACTTCC 57.353 40.909 0.00 0.00 39.87 3.46
5515 5902 4.019858 TGTTTCATTGGTCACAACTTCCA 58.980 39.130 0.00 0.00 39.87 3.53
5516 5903 4.142271 TGTTTCATTGGTCACAACTTCCAC 60.142 41.667 0.00 0.00 39.87 4.02
5517 5904 3.289407 TCATTGGTCACAACTTCCACA 57.711 42.857 0.00 0.00 39.87 4.17
5518 5905 3.625853 TCATTGGTCACAACTTCCACAA 58.374 40.909 0.00 0.00 39.87 3.33
5519 5906 4.019858 TCATTGGTCACAACTTCCACAAA 58.980 39.130 0.00 0.00 39.87 2.83
5520 5907 4.648762 TCATTGGTCACAACTTCCACAAAT 59.351 37.500 0.00 0.00 39.87 2.32
5521 5908 5.128499 TCATTGGTCACAACTTCCACAAATT 59.872 36.000 0.00 0.00 39.87 1.82
5522 5909 5.413309 TTGGTCACAACTTCCACAAATTT 57.587 34.783 0.00 0.00 0.00 1.82
5523 5910 4.753233 TGGTCACAACTTCCACAAATTTG 58.247 39.130 16.67 16.67 34.58 2.32
5524 5911 4.464244 TGGTCACAACTTCCACAAATTTGA 59.536 37.500 24.64 0.00 33.14 2.69
5525 5912 5.128499 TGGTCACAACTTCCACAAATTTGAT 59.872 36.000 24.64 6.33 33.14 2.57
5526 5913 5.691754 GGTCACAACTTCCACAAATTTGATC 59.308 40.000 24.64 0.00 33.14 2.92
5527 5914 6.461509 GGTCACAACTTCCACAAATTTGATCT 60.462 38.462 24.64 0.00 33.14 2.75
5528 5915 6.638468 GTCACAACTTCCACAAATTTGATCTC 59.362 38.462 24.64 0.00 33.14 2.75
5529 5916 6.320926 TCACAACTTCCACAAATTTGATCTCA 59.679 34.615 24.64 3.82 33.14 3.27
5530 5917 7.014518 TCACAACTTCCACAAATTTGATCTCAT 59.985 33.333 24.64 3.35 33.14 2.90
5531 5918 7.115805 CACAACTTCCACAAATTTGATCTCATG 59.884 37.037 24.64 15.30 33.14 3.07
5532 5919 7.014518 ACAACTTCCACAAATTTGATCTCATGA 59.985 33.333 24.64 0.00 33.14 3.07
5533 5920 7.713734 ACTTCCACAAATTTGATCTCATGAT 57.286 32.000 24.64 0.00 35.26 2.45
5534 5921 8.812513 ACTTCCACAAATTTGATCTCATGATA 57.187 30.769 24.64 0.00 32.19 2.15
5535 5922 9.246670 ACTTCCACAAATTTGATCTCATGATAA 57.753 29.630 24.64 8.03 32.19 1.75
5547 5934 9.687210 TTGATCTCATGATAAATATTTGCAAGC 57.313 29.630 11.05 0.00 32.19 4.01
5548 5935 8.852135 TGATCTCATGATAAATATTTGCAAGCA 58.148 29.630 11.05 0.48 32.19 3.91
5549 5936 9.125906 GATCTCATGATAAATATTTGCAAGCAC 57.874 33.333 11.05 0.00 32.19 4.40
5550 5937 8.229253 TCTCATGATAAATATTTGCAAGCACT 57.771 30.769 11.05 0.00 0.00 4.40
5551 5938 8.689061 TCTCATGATAAATATTTGCAAGCACTT 58.311 29.630 11.05 0.00 0.00 3.16
5552 5939 9.955208 CTCATGATAAATATTTGCAAGCACTTA 57.045 29.630 11.05 0.00 0.00 2.24
5553 5940 9.955208 TCATGATAAATATTTGCAAGCACTTAG 57.045 29.630 11.05 0.00 0.00 2.18
5554 5941 9.955208 CATGATAAATATTTGCAAGCACTTAGA 57.045 29.630 11.05 0.00 0.00 2.10
5556 5943 9.787532 TGATAAATATTTGCAAGCACTTAGAAC 57.212 29.630 11.05 0.00 0.00 3.01
5557 5944 9.237846 GATAAATATTTGCAAGCACTTAGAACC 57.762 33.333 11.05 0.00 0.00 3.62
5558 5945 6.840780 AATATTTGCAAGCACTTAGAACCT 57.159 33.333 0.00 0.00 0.00 3.50
5559 5946 6.840780 ATATTTGCAAGCACTTAGAACCTT 57.159 33.333 0.00 0.00 0.00 3.50
5560 5947 4.568152 TTTGCAAGCACTTAGAACCTTC 57.432 40.909 0.00 0.00 0.00 3.46
5561 5948 3.492102 TGCAAGCACTTAGAACCTTCT 57.508 42.857 0.00 0.00 41.24 2.85
5562 5949 4.617253 TGCAAGCACTTAGAACCTTCTA 57.383 40.909 0.00 0.00 38.70 2.10
5563 5950 5.165961 TGCAAGCACTTAGAACCTTCTAT 57.834 39.130 0.00 0.00 39.36 1.98
5564 5951 5.560724 TGCAAGCACTTAGAACCTTCTATT 58.439 37.500 0.00 0.00 39.36 1.73
5565 5952 6.003950 TGCAAGCACTTAGAACCTTCTATTT 58.996 36.000 0.00 0.00 39.36 1.40
5566 5953 6.490040 TGCAAGCACTTAGAACCTTCTATTTT 59.510 34.615 0.00 0.00 39.36 1.82
5567 5954 7.014230 TGCAAGCACTTAGAACCTTCTATTTTT 59.986 33.333 0.00 0.00 39.36 1.94
5583 5970 1.868469 TTTTTGCATGCAGTGAAGCC 58.132 45.000 21.50 0.00 0.00 4.35
5584 5971 1.042229 TTTTGCATGCAGTGAAGCCT 58.958 45.000 21.50 0.00 0.00 4.58
5585 5972 1.042229 TTTGCATGCAGTGAAGCCTT 58.958 45.000 21.50 0.00 0.00 4.35
5586 5973 0.599558 TTGCATGCAGTGAAGCCTTC 59.400 50.000 21.50 0.00 0.00 3.46
5587 5974 0.251033 TGCATGCAGTGAAGCCTTCT 60.251 50.000 18.46 0.00 0.00 2.85
5588 5975 0.886563 GCATGCAGTGAAGCCTTCTT 59.113 50.000 14.21 0.00 34.68 2.52
5589 5976 1.271656 GCATGCAGTGAAGCCTTCTTT 59.728 47.619 14.21 0.00 31.48 2.52
5590 5977 2.288640 GCATGCAGTGAAGCCTTCTTTT 60.289 45.455 14.21 0.00 31.48 2.27
5591 5978 3.801293 GCATGCAGTGAAGCCTTCTTTTT 60.801 43.478 14.21 0.00 31.48 1.94
5613 6000 7.798596 TTTTGTGCCACATTATCAAAATTGT 57.201 28.000 0.00 0.00 34.54 2.71
5614 6001 7.418840 TTTGTGCCACATTATCAAAATTGTC 57.581 32.000 0.00 0.00 0.00 3.18
5615 6002 6.343716 TGTGCCACATTATCAAAATTGTCT 57.656 33.333 0.00 0.00 0.00 3.41
5616 6003 7.459795 TGTGCCACATTATCAAAATTGTCTA 57.540 32.000 0.00 0.00 0.00 2.59
5617 6004 7.537715 TGTGCCACATTATCAAAATTGTCTAG 58.462 34.615 0.00 0.00 0.00 2.43
5618 6005 7.176515 TGTGCCACATTATCAAAATTGTCTAGT 59.823 33.333 0.00 0.00 0.00 2.57
5619 6006 8.028938 GTGCCACATTATCAAAATTGTCTAGTT 58.971 33.333 0.00 0.00 0.00 2.24
5620 6007 9.237187 TGCCACATTATCAAAATTGTCTAGTTA 57.763 29.630 0.00 0.00 0.00 2.24
5639 6026 9.929180 TCTAGTTATGTATGATACTTCCATTGC 57.071 33.333 4.03 0.00 0.00 3.56
5640 6027 7.658179 AGTTATGTATGATACTTCCATTGCG 57.342 36.000 4.03 0.00 0.00 4.85
5641 6028 6.650807 AGTTATGTATGATACTTCCATTGCGG 59.349 38.462 4.03 0.00 0.00 5.69
5642 6029 4.681074 TGTATGATACTTCCATTGCGGA 57.319 40.909 4.03 0.00 44.40 5.54
5643 6030 4.377021 TGTATGATACTTCCATTGCGGAC 58.623 43.478 4.03 0.00 46.36 4.79
5644 6031 3.558931 ATGATACTTCCATTGCGGACA 57.441 42.857 0.00 0.00 46.36 4.02
5645 6032 3.342377 TGATACTTCCATTGCGGACAA 57.658 42.857 0.00 0.00 46.36 3.18
5646 6033 3.006940 TGATACTTCCATTGCGGACAAC 58.993 45.455 0.00 0.00 46.36 3.32
5647 6034 2.851263 TACTTCCATTGCGGACAACT 57.149 45.000 0.00 0.00 46.36 3.16
5648 6035 1.981256 ACTTCCATTGCGGACAACTT 58.019 45.000 0.00 0.00 46.36 2.66
5649 6036 3.134574 ACTTCCATTGCGGACAACTTA 57.865 42.857 0.00 0.00 46.36 2.24
5650 6037 3.074412 ACTTCCATTGCGGACAACTTAG 58.926 45.455 0.00 0.00 46.36 2.18
5651 6038 2.851263 TCCATTGCGGACAACTTAGT 57.149 45.000 0.00 0.00 39.64 2.24
5652 6039 3.965379 TCCATTGCGGACAACTTAGTA 57.035 42.857 0.00 0.00 39.64 1.82
5653 6040 3.592059 TCCATTGCGGACAACTTAGTAC 58.408 45.455 0.00 0.00 39.64 2.73
5654 6041 3.007074 TCCATTGCGGACAACTTAGTACA 59.993 43.478 0.00 0.00 39.64 2.90
5655 6042 3.749088 CCATTGCGGACAACTTAGTACAA 59.251 43.478 0.00 0.00 38.99 2.41
5656 6043 4.378046 CCATTGCGGACAACTTAGTACAAC 60.378 45.833 0.00 0.00 38.99 3.32
5657 6044 2.758009 TGCGGACAACTTAGTACAACC 58.242 47.619 0.00 0.00 0.00 3.77
5658 6045 2.366266 TGCGGACAACTTAGTACAACCT 59.634 45.455 0.00 0.00 0.00 3.50
5659 6046 3.573538 TGCGGACAACTTAGTACAACCTA 59.426 43.478 0.00 0.00 0.00 3.08
5660 6047 3.922850 GCGGACAACTTAGTACAACCTAC 59.077 47.826 0.00 0.00 0.00 3.18
5661 6048 4.321527 GCGGACAACTTAGTACAACCTACT 60.322 45.833 0.00 0.00 0.00 2.57
5662 6049 5.776744 CGGACAACTTAGTACAACCTACTT 58.223 41.667 0.00 0.00 0.00 2.24
5663 6050 6.570378 GCGGACAACTTAGTACAACCTACTTA 60.570 42.308 0.00 0.00 0.00 2.24
5664 6051 7.025963 CGGACAACTTAGTACAACCTACTTAG 58.974 42.308 0.00 0.00 32.36 2.18
5666 6053 7.177392 GGACAACTTAGTACAACCTACTTAGGA 59.823 40.741 9.40 0.00 46.63 2.94
5667 6054 8.120140 ACAACTTAGTACAACCTACTTAGGAG 57.880 38.462 9.40 4.00 46.63 3.69
5668 6055 7.727634 ACAACTTAGTACAACCTACTTAGGAGT 59.272 37.037 9.40 9.26 46.63 3.85
5669 6056 8.583296 CAACTTAGTACAACCTACTTAGGAGTT 58.417 37.037 9.40 3.17 46.63 3.01
5670 6057 8.120140 ACTTAGTACAACCTACTTAGGAGTTG 57.880 38.462 9.40 6.69 46.63 3.16
5677 6064 4.473477 CCTACTTAGGAGTTGGTTGAGG 57.527 50.000 0.00 0.00 46.63 3.86
5678 6065 3.197983 CCTACTTAGGAGTTGGTTGAGGG 59.802 52.174 0.00 0.00 46.63 4.30
5679 6066 1.985895 ACTTAGGAGTTGGTTGAGGGG 59.014 52.381 0.00 0.00 29.87 4.79
5680 6067 1.985895 CTTAGGAGTTGGTTGAGGGGT 59.014 52.381 0.00 0.00 0.00 4.95
5681 6068 1.652947 TAGGAGTTGGTTGAGGGGTC 58.347 55.000 0.00 0.00 0.00 4.46
5682 6069 0.401395 AGGAGTTGGTTGAGGGGTCA 60.401 55.000 0.00 0.00 0.00 4.02
5683 6070 0.250770 GGAGTTGGTTGAGGGGTCAC 60.251 60.000 0.00 0.00 0.00 3.67
5684 6071 0.765510 GAGTTGGTTGAGGGGTCACT 59.234 55.000 0.00 0.00 0.00 3.41
5685 6072 1.143073 GAGTTGGTTGAGGGGTCACTT 59.857 52.381 0.00 0.00 0.00 3.16
5686 6073 1.143073 AGTTGGTTGAGGGGTCACTTC 59.857 52.381 0.00 0.00 0.00 3.01
5687 6074 1.133915 GTTGGTTGAGGGGTCACTTCA 60.134 52.381 0.00 0.00 0.00 3.02
5688 6075 1.444933 TGGTTGAGGGGTCACTTCAT 58.555 50.000 0.00 0.00 0.00 2.57
5689 6076 1.780309 TGGTTGAGGGGTCACTTCATT 59.220 47.619 0.00 0.00 0.00 2.57
5690 6077 2.983192 TGGTTGAGGGGTCACTTCATTA 59.017 45.455 0.00 0.00 0.00 1.90
5691 6078 3.396276 TGGTTGAGGGGTCACTTCATTAA 59.604 43.478 0.00 0.00 0.00 1.40
5692 6079 4.141135 TGGTTGAGGGGTCACTTCATTAAA 60.141 41.667 0.00 0.00 0.00 1.52
5693 6080 4.830600 GGTTGAGGGGTCACTTCATTAAAA 59.169 41.667 0.00 0.00 0.00 1.52
5694 6081 5.480422 GGTTGAGGGGTCACTTCATTAAAAT 59.520 40.000 0.00 0.00 0.00 1.82
5695 6082 6.014584 GGTTGAGGGGTCACTTCATTAAAATT 60.015 38.462 0.00 0.00 0.00 1.82
5696 6083 6.588719 TGAGGGGTCACTTCATTAAAATTG 57.411 37.500 0.00 0.00 0.00 2.32
5697 6084 6.074648 TGAGGGGTCACTTCATTAAAATTGT 58.925 36.000 0.00 0.00 0.00 2.71
5698 6085 6.208599 TGAGGGGTCACTTCATTAAAATTGTC 59.791 38.462 0.00 0.00 0.00 3.18
5699 6086 6.314917 AGGGGTCACTTCATTAAAATTGTCT 58.685 36.000 0.00 0.00 0.00 3.41
5700 6087 6.782494 AGGGGTCACTTCATTAAAATTGTCTT 59.218 34.615 0.00 0.00 0.00 3.01
5701 6088 6.868339 GGGGTCACTTCATTAAAATTGTCTTG 59.132 38.462 0.00 0.00 0.00 3.02
5702 6089 7.433680 GGGTCACTTCATTAAAATTGTCTTGT 58.566 34.615 0.00 0.00 0.00 3.16
5703 6090 7.926018 GGGTCACTTCATTAAAATTGTCTTGTT 59.074 33.333 0.00 0.00 0.00 2.83
5704 6091 8.755018 GGTCACTTCATTAAAATTGTCTTGTTG 58.245 33.333 0.00 0.00 0.00 3.33
5705 6092 9.515020 GTCACTTCATTAAAATTGTCTTGTTGA 57.485 29.630 0.00 0.00 0.00 3.18
5706 6093 9.515020 TCACTTCATTAAAATTGTCTTGTTGAC 57.485 29.630 0.00 0.00 45.54 3.18
5721 6108 8.479313 GTCTTGTTGACATGTATGATACTTCA 57.521 34.615 0.00 1.76 44.73 3.02
5722 6109 8.935844 GTCTTGTTGACATGTATGATACTTCAA 58.064 33.333 0.00 7.30 44.73 2.69
5723 6110 9.671279 TCTTGTTGACATGTATGATACTTCAAT 57.329 29.630 0.00 0.00 34.96 2.57
5734 6121 9.337396 TGTATGATACTTCAATTATGGACAACC 57.663 33.333 4.03 0.00 34.96 3.77
5735 6122 9.561069 GTATGATACTTCAATTATGGACAACCT 57.439 33.333 0.00 0.00 34.96 3.50
5738 6125 9.613428 TGATACTTCAATTATGGACAACCTTAG 57.387 33.333 0.00 0.00 37.04 2.18
5739 6126 9.614792 GATACTTCAATTATGGACAACCTTAGT 57.385 33.333 0.00 0.00 37.04 2.24
5740 6127 7.687941 ACTTCAATTATGGACAACCTTAGTG 57.312 36.000 0.00 0.00 37.04 2.74
5741 6128 7.231467 ACTTCAATTATGGACAACCTTAGTGT 58.769 34.615 0.00 0.00 37.04 3.55
5742 6129 7.724061 ACTTCAATTATGGACAACCTTAGTGTT 59.276 33.333 0.00 0.00 37.04 3.32
5743 6130 9.226606 CTTCAATTATGGACAACCTTAGTGTTA 57.773 33.333 0.00 0.00 37.04 2.41
5744 6131 8.556213 TCAATTATGGACAACCTTAGTGTTAC 57.444 34.615 0.00 0.00 37.04 2.50
5745 6132 8.158132 TCAATTATGGACAACCTTAGTGTTACA 58.842 33.333 0.00 0.00 37.04 2.41
5746 6133 8.450964 CAATTATGGACAACCTTAGTGTTACAG 58.549 37.037 0.00 0.00 37.04 2.74
5747 6134 5.562298 ATGGACAACCTTAGTGTTACAGT 57.438 39.130 0.00 0.00 37.04 3.55
5748 6135 6.675413 ATGGACAACCTTAGTGTTACAGTA 57.325 37.500 0.00 0.00 37.04 2.74
5749 6136 6.482898 TGGACAACCTTAGTGTTACAGTAA 57.517 37.500 11.56 11.56 37.04 2.24
5750 6137 6.887013 TGGACAACCTTAGTGTTACAGTAAA 58.113 36.000 12.88 0.00 37.04 2.01
5751 6138 7.337167 TGGACAACCTTAGTGTTACAGTAAAA 58.663 34.615 12.88 0.00 37.04 1.52
5752 6139 7.280652 TGGACAACCTTAGTGTTACAGTAAAAC 59.719 37.037 12.88 5.56 37.04 2.43
5753 6140 7.280652 GGACAACCTTAGTGTTACAGTAAAACA 59.719 37.037 14.95 0.83 34.56 2.83
5754 6141 8.564509 ACAACCTTAGTGTTACAGTAAAACAA 57.435 30.769 14.95 7.17 38.50 2.83
5755 6142 9.012161 ACAACCTTAGTGTTACAGTAAAACAAA 57.988 29.630 14.95 1.32 38.50 2.83
5756 6143 9.843334 CAACCTTAGTGTTACAGTAAAACAAAA 57.157 29.630 14.95 8.31 38.50 2.44
5769 6156 9.097257 ACAGTAAAACAAAAATGAATGGAAGTG 57.903 29.630 0.00 0.00 0.00 3.16
5770 6157 9.311916 CAGTAAAACAAAAATGAATGGAAGTGA 57.688 29.630 0.00 0.00 0.00 3.41
5771 6158 9.883142 AGTAAAACAAAAATGAATGGAAGTGAA 57.117 25.926 0.00 0.00 0.00 3.18
5774 6161 7.733402 AACAAAAATGAATGGAAGTGAATGG 57.267 32.000 0.00 0.00 0.00 3.16
5775 6162 7.065120 ACAAAAATGAATGGAAGTGAATGGA 57.935 32.000 0.00 0.00 0.00 3.41
5776 6163 7.682628 ACAAAAATGAATGGAAGTGAATGGAT 58.317 30.769 0.00 0.00 0.00 3.41
5777 6164 7.604927 ACAAAAATGAATGGAAGTGAATGGATG 59.395 33.333 0.00 0.00 0.00 3.51
5778 6165 7.484993 AAAATGAATGGAAGTGAATGGATGA 57.515 32.000 0.00 0.00 0.00 2.92
5779 6166 7.670605 AAATGAATGGAAGTGAATGGATGAT 57.329 32.000 0.00 0.00 0.00 2.45
5780 6167 7.670605 AATGAATGGAAGTGAATGGATGATT 57.329 32.000 0.00 0.00 0.00 2.57
5781 6168 8.771521 AATGAATGGAAGTGAATGGATGATTA 57.228 30.769 0.00 0.00 0.00 1.75
5782 6169 7.812690 TGAATGGAAGTGAATGGATGATTAG 57.187 36.000 0.00 0.00 0.00 1.73
5783 6170 7.348815 TGAATGGAAGTGAATGGATGATTAGT 58.651 34.615 0.00 0.00 0.00 2.24
5784 6171 7.500227 TGAATGGAAGTGAATGGATGATTAGTC 59.500 37.037 0.00 0.00 0.00 2.59
5785 6172 5.684704 TGGAAGTGAATGGATGATTAGTCC 58.315 41.667 0.00 0.00 36.26 3.85
5786 6173 5.429762 TGGAAGTGAATGGATGATTAGTCCT 59.570 40.000 0.00 0.00 36.68 3.85
5787 6174 5.762218 GGAAGTGAATGGATGATTAGTCCTG 59.238 44.000 0.00 0.00 36.68 3.86
5788 6175 5.301835 AGTGAATGGATGATTAGTCCTGG 57.698 43.478 0.00 0.00 36.68 4.45
5789 6176 4.723789 AGTGAATGGATGATTAGTCCTGGT 59.276 41.667 0.00 0.00 36.68 4.00
5790 6177 5.192522 AGTGAATGGATGATTAGTCCTGGTT 59.807 40.000 0.00 0.00 36.68 3.67
5791 6178 5.529060 GTGAATGGATGATTAGTCCTGGTTC 59.471 44.000 0.00 0.00 36.68 3.62
5792 6179 5.429762 TGAATGGATGATTAGTCCTGGTTCT 59.570 40.000 0.00 0.00 36.68 3.01
5793 6180 6.615316 TGAATGGATGATTAGTCCTGGTTCTA 59.385 38.462 0.00 0.00 36.68 2.10
5794 6181 7.293299 TGAATGGATGATTAGTCCTGGTTCTAT 59.707 37.037 0.00 0.00 36.68 1.98
5795 6182 7.639062 ATGGATGATTAGTCCTGGTTCTATT 57.361 36.000 0.00 0.00 36.68 1.73
5796 6183 6.830912 TGGATGATTAGTCCTGGTTCTATTG 58.169 40.000 0.00 0.00 36.68 1.90
5797 6184 6.615316 TGGATGATTAGTCCTGGTTCTATTGA 59.385 38.462 0.00 0.00 36.68 2.57
5798 6185 7.293299 TGGATGATTAGTCCTGGTTCTATTGAT 59.707 37.037 0.00 0.00 36.68 2.57
5799 6186 8.160106 GGATGATTAGTCCTGGTTCTATTGATT 58.840 37.037 0.00 0.00 32.85 2.57
5800 6187 9.213799 GATGATTAGTCCTGGTTCTATTGATTC 57.786 37.037 0.00 0.00 0.00 2.52
5801 6188 8.324191 TGATTAGTCCTGGTTCTATTGATTCT 57.676 34.615 0.00 0.00 0.00 2.40
5802 6189 8.772250 TGATTAGTCCTGGTTCTATTGATTCTT 58.228 33.333 0.00 0.00 0.00 2.52
5806 6193 8.152023 AGTCCTGGTTCTATTGATTCTTAAGT 57.848 34.615 1.63 0.00 0.00 2.24
5807 6194 9.268282 AGTCCTGGTTCTATTGATTCTTAAGTA 57.732 33.333 1.63 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 1.889170 CTCCACAGCTCAGAGTACACA 59.111 52.381 0.00 0.00 0.00 3.72
61 62 2.427453 GACAAGGTTATCTCCGCTCTCA 59.573 50.000 0.00 0.00 0.00 3.27
73 74 4.669206 TCCTTTACACGTGACAAGGTTA 57.331 40.909 31.66 20.41 37.62 2.85
116 117 1.899814 AGATCTTAGGCGTTGGTGTGA 59.100 47.619 0.00 0.00 0.00 3.58
146 147 5.614013 CGAAGGAGGCTAGTTGTTAAAAACG 60.614 44.000 2.83 0.00 35.13 3.60
325 326 0.804989 CGGCAAACTTGATCAGGGAC 59.195 55.000 9.90 0.00 0.00 4.46
326 327 0.322456 CCGGCAAACTTGATCAGGGA 60.322 55.000 9.90 0.00 0.00 4.20
327 328 0.609131 ACCGGCAAACTTGATCAGGG 60.609 55.000 9.90 3.17 0.00 4.45
371 372 4.622456 CCGTGTGTTGCAACGGGC 62.622 66.667 23.79 16.43 45.13 6.13
423 424 5.106594 GGTTTGATTCCACATTTGGCAATTC 60.107 40.000 0.00 0.00 43.56 2.17
433 434 4.281688 CCTTCACTTGGTTTGATTCCACAT 59.718 41.667 0.00 0.00 34.45 3.21
598 600 0.666274 TCGCTGTGGCAGAGTTAACG 60.666 55.000 13.65 8.17 38.60 3.18
842 844 5.591099 TGAACAAAAAGATCACAAAGAGCC 58.409 37.500 0.00 0.00 31.44 4.70
888 890 5.028549 AGTGGCCTACAGATTCACTATTG 57.971 43.478 3.32 0.00 36.98 1.90
896 898 7.099764 CGAATGAATATAGTGGCCTACAGATT 58.900 38.462 3.32 0.00 0.00 2.40
959 961 7.756722 CACAAATTAGAGCATACCAGGAAAAAG 59.243 37.037 0.00 0.00 0.00 2.27
991 993 2.093288 TCTCCTTCGAGCTGCAATGAAT 60.093 45.455 1.02 0.00 35.94 2.57
992 994 1.276138 TCTCCTTCGAGCTGCAATGAA 59.724 47.619 1.02 1.75 35.94 2.57
1047 1049 1.234821 TCGATGGTGAACAAAGGCAC 58.765 50.000 0.00 0.00 0.00 5.01
1048 1050 1.811965 CATCGATGGTGAACAAAGGCA 59.188 47.619 17.96 0.00 0.00 4.75
1049 1051 1.468054 GCATCGATGGTGAACAAAGGC 60.468 52.381 26.00 3.90 0.00 4.35
1059 1061 5.417754 AATATGATCTCAGCATCGATGGT 57.582 39.130 23.81 23.81 39.42 3.55
1060 1062 6.571605 ACTAATATGATCTCAGCATCGATGG 58.428 40.000 26.00 11.15 0.00 3.51
1061 1063 9.578439 TTAACTAATATGATCTCAGCATCGATG 57.422 33.333 21.27 21.27 0.00 3.84
1163 1177 6.688385 CCATAACATGCAGACAAAAAGTATCG 59.312 38.462 0.00 0.00 0.00 2.92
1219 1233 4.888326 AAGAATGCCACCTTTTATTGCA 57.112 36.364 0.00 0.00 36.23 4.08
1220 1234 6.558771 AAAAAGAATGCCACCTTTTATTGC 57.441 33.333 6.97 0.00 40.49 3.56
1281 1295 3.744942 GGGACAAACCGAGTTAGAAGAAC 59.255 47.826 0.00 0.00 40.11 3.01
1284 1298 3.679824 AGGGACAAACCGAGTTAGAAG 57.320 47.619 0.00 0.00 40.11 2.85
1293 1307 5.048364 TGAAATGTTGATTAGGGACAAACCG 60.048 40.000 0.00 0.00 40.11 4.44
1337 1351 7.977789 ACAACACTATGATATTGTGAACACA 57.022 32.000 9.68 3.39 38.95 3.72
1515 1531 4.002982 TGGTACACACGAGATAACTACGT 58.997 43.478 0.00 0.00 40.87 3.57
1516 1532 4.604843 TGGTACACACGAGATAACTACG 57.395 45.455 0.00 0.00 0.00 3.51
1555 1571 1.821136 GCTGGCCTCTGCAGTATTTTT 59.179 47.619 14.67 0.00 40.13 1.94
1556 1572 1.467920 GCTGGCCTCTGCAGTATTTT 58.532 50.000 14.67 0.00 40.13 1.82
1557 1573 0.745845 CGCTGGCCTCTGCAGTATTT 60.746 55.000 14.67 0.00 40.13 1.40
1558 1574 1.153289 CGCTGGCCTCTGCAGTATT 60.153 57.895 14.67 0.00 40.13 1.89
1559 1575 2.503061 CGCTGGCCTCTGCAGTAT 59.497 61.111 14.67 0.00 40.13 2.12
1804 1821 3.330405 TCCTGAGATGTCCCAATGTTTCA 59.670 43.478 0.00 0.00 0.00 2.69
1805 1822 3.955471 TCCTGAGATGTCCCAATGTTTC 58.045 45.455 0.00 0.00 0.00 2.78
1812 1829 4.624913 AGAAGTAATCCTGAGATGTCCCA 58.375 43.478 0.00 0.00 31.29 4.37
1862 1879 1.069049 CCAGGCAAAACTCCAAAGGTG 59.931 52.381 0.00 0.00 0.00 4.00
1868 1885 4.219725 GCTAATTTACCAGGCAAAACTCCA 59.780 41.667 0.00 0.00 0.00 3.86
1869 1886 4.462834 AGCTAATTTACCAGGCAAAACTCC 59.537 41.667 0.00 0.00 0.00 3.85
2049 2316 2.841881 AGGACCCCGCTTTTATTCACTA 59.158 45.455 0.00 0.00 0.00 2.74
2050 2317 1.633945 AGGACCCCGCTTTTATTCACT 59.366 47.619 0.00 0.00 0.00 3.41
2186 2538 6.173339 TGACTGCTCAGGGTAGAAAAATAAG 58.827 40.000 0.00 0.00 0.00 1.73
2385 2738 6.580041 GCTCAATTAAGCGATCCATAAATGTG 59.420 38.462 0.00 0.00 31.56 3.21
2438 2791 9.624373 AACAATCTCAAGACTCTTGCAATATAT 57.376 29.630 13.24 0.00 0.00 0.86
2456 2809 7.433425 CAGAAAAGGACACTTTCAAACAATCTC 59.567 37.037 0.00 0.00 45.85 2.75
2494 2847 5.186942 TCTTACACAAGCCAACTGTAAACA 58.813 37.500 0.00 0.00 31.60 2.83
2590 2944 6.749923 ACTAGACAGAATTCAAAGCCATTC 57.250 37.500 8.44 0.00 0.00 2.67
2622 2976 7.491682 AGTGAATTGTGCACTTAAGACAATTT 58.508 30.769 23.80 12.85 45.72 1.82
2632 2986 6.449635 TTGAAAGTAGTGAATTGTGCACTT 57.550 33.333 19.41 4.48 43.67 3.16
2708 3064 3.317430 AGAGTACTCGTGTCGAACCTTTT 59.683 43.478 17.07 0.00 34.74 2.27
2763 3119 5.536161 ACAGCAAACAATAACTTGATCCACT 59.464 36.000 0.00 0.00 36.20 4.00
2798 3154 8.503458 TTTCAGATTGCAAAATGAAAAAGGAA 57.497 26.923 27.13 13.02 40.40 3.36
2805 3161 9.985730 AGTAGAAATTTCAGATTGCAAAATGAA 57.014 25.926 19.99 19.96 34.89 2.57
3153 3509 7.425606 ACTTTCGCATAACATTTTCAAGACTT 58.574 30.769 0.00 0.00 0.00 3.01
3189 3545 7.934457 TCTCATTTTCTTCAAAGAACTCCAAG 58.066 34.615 4.71 1.22 44.18 3.61
3330 3686 9.559732 TTGAAGAACTCAGTAATGAATGAAAGA 57.440 29.630 0.00 0.00 34.81 2.52
3491 3847 5.403897 TCAACAGAAACAGCGTCTAAAAG 57.596 39.130 0.00 0.00 0.00 2.27
3507 3863 7.646314 AGAACATGAAGAAACTGAATCAACAG 58.354 34.615 0.00 0.00 42.78 3.16
3518 3874 6.864685 TCATGCAAATGAGAACATGAAGAAAC 59.135 34.615 0.00 0.00 44.29 2.78
3595 3951 3.005155 AGTCAAACCTTCTTTGCTGATGC 59.995 43.478 0.00 0.00 40.20 3.91
3637 3993 7.706179 TGAGCTTAACTTCAAACATTTTCTTGG 59.294 33.333 0.00 0.00 0.00 3.61
3942 4298 7.865706 CTGGTGTAGGAAAGCTTATTATGTT 57.134 36.000 0.00 0.00 0.00 2.71
4075 4431 4.633175 TCGTAAGGACATGTGTAAGCAAA 58.367 39.130 1.15 0.00 38.47 3.68
4076 4432 4.260139 TCGTAAGGACATGTGTAAGCAA 57.740 40.909 1.15 0.00 38.47 3.91
4078 4434 4.433805 CGTTTCGTAAGGACATGTGTAAGC 60.434 45.833 1.15 0.00 38.47 3.09
4079 4435 4.090930 CCGTTTCGTAAGGACATGTGTAAG 59.909 45.833 1.15 0.00 38.47 2.34
4082 4438 2.224113 ACCGTTTCGTAAGGACATGTGT 60.224 45.455 1.15 0.00 38.47 3.72
4083 4439 2.409975 ACCGTTTCGTAAGGACATGTG 58.590 47.619 1.15 0.00 38.47 3.21
4111 4467 6.530120 TCAACTTCTATGTAACTTGCCAGAA 58.470 36.000 0.00 0.00 0.00 3.02
4153 4509 5.567423 GCCTATCAACAGCAACAAAAATCCT 60.567 40.000 0.00 0.00 0.00 3.24
4201 4557 1.272212 AGCAACAAAATAACCAGCCCG 59.728 47.619 0.00 0.00 0.00 6.13
4208 4564 6.315144 ACCAACTTCCAAAGCAACAAAATAAC 59.685 34.615 0.00 0.00 0.00 1.89
4319 4675 4.748277 GGGACTACATGCCTAACTAACA 57.252 45.455 0.00 0.00 35.42 2.41
4357 4713 8.793592 GTTACTCCCTCAAGTGATTTAAAACAT 58.206 33.333 1.17 0.00 0.00 2.71
4444 4800 0.896940 CAGCCCAAGCATTCACCTGT 60.897 55.000 0.00 0.00 43.56 4.00
4704 5060 7.561722 ACAGTTACTAGGAGCTTCATCAAGATA 59.438 37.037 0.00 0.00 0.00 1.98
4822 5178 9.255304 GAAATACTCATTTTAAAGCAACAACCA 57.745 29.630 0.00 0.00 34.44 3.67
4871 5227 1.212751 GCAAAAGGATGACCACCGC 59.787 57.895 0.00 0.00 38.94 5.68
4908 5264 6.624352 ATGCTCACATGCGAATATAAAAGT 57.376 33.333 0.00 0.00 34.35 2.66
4909 5265 6.129273 GCAATGCTCACATGCGAATATAAAAG 60.129 38.462 0.00 0.00 36.36 2.27
4920 5276 0.522705 CGACAGCAATGCTCACATGC 60.523 55.000 4.03 2.37 36.40 4.06
4921 5277 0.800631 ACGACAGCAATGCTCACATG 59.199 50.000 4.03 0.00 36.40 3.21
4939 5295 6.730960 TCCTGGTACAATAATGTCGAAAAC 57.269 37.500 0.00 0.00 41.05 2.43
4978 5344 5.636543 ACTAATACACGACACAAAAGTAGGC 59.363 40.000 0.00 0.00 0.00 3.93
4987 5353 6.366604 CCATGTAACAACTAATACACGACACA 59.633 38.462 0.00 0.00 35.05 3.72
4988 5354 6.587226 TCCATGTAACAACTAATACACGACAC 59.413 38.462 0.00 0.00 35.05 3.67
4989 5355 6.689554 TCCATGTAACAACTAATACACGACA 58.310 36.000 0.00 0.00 35.05 4.35
4990 5356 7.766219 ATCCATGTAACAACTAATACACGAC 57.234 36.000 0.00 0.00 35.05 4.34
5051 5418 5.408604 GTGTTCGCCTCTTCTTAATTGAAGA 59.591 40.000 7.72 7.72 46.89 2.87
5052 5419 5.179368 TGTGTTCGCCTCTTCTTAATTGAAG 59.821 40.000 0.16 0.16 43.36 3.02
5053 5420 5.060506 TGTGTTCGCCTCTTCTTAATTGAA 58.939 37.500 0.00 0.00 0.00 2.69
5054 5421 4.637276 TGTGTTCGCCTCTTCTTAATTGA 58.363 39.130 0.00 0.00 0.00 2.57
5055 5422 5.049405 ACTTGTGTTCGCCTCTTCTTAATTG 60.049 40.000 0.00 0.00 0.00 2.32
5056 5423 5.063880 ACTTGTGTTCGCCTCTTCTTAATT 58.936 37.500 0.00 0.00 0.00 1.40
5057 5424 4.642429 ACTTGTGTTCGCCTCTTCTTAAT 58.358 39.130 0.00 0.00 0.00 1.40
5074 5441 7.827729 GGTCCCTGACAGTTAATATAAACTTGT 59.172 37.037 0.93 0.00 37.61 3.16
5101 5468 3.937814 TCAAATCACCAGCGTTGTAGAT 58.062 40.909 0.00 0.00 0.00 1.98
5107 5474 2.416547 CGAGAATCAAATCACCAGCGTT 59.583 45.455 0.00 0.00 33.17 4.84
5129 5514 2.737252 GGACAGCTTGGAACGAAACTAG 59.263 50.000 0.00 0.00 0.00 2.57
5184 5569 1.589993 CAGATAGCGTCCACTGCCG 60.590 63.158 0.00 0.00 0.00 5.69
5195 5580 1.466360 CCGTTTTGCACTGCAGATAGC 60.466 52.381 23.35 20.50 40.61 2.97
5196 5581 1.806542 ACCGTTTTGCACTGCAGATAG 59.193 47.619 23.35 10.90 40.61 2.08
5210 5595 5.576447 AACTTTGTTCATGAAGACCGTTT 57.424 34.783 8.80 0.00 0.00 3.60
5214 5599 7.648142 TGTGATTAACTTTGTTCATGAAGACC 58.352 34.615 8.80 0.00 0.00 3.85
5224 5609 4.887071 TGACCAGCTGTGATTAACTTTGTT 59.113 37.500 13.81 0.00 0.00 2.83
5230 5615 6.528072 GCTTATTTTGACCAGCTGTGATTAAC 59.472 38.462 13.81 0.00 0.00 2.01
5289 5674 5.478332 TCATTTGAGCTCAAGAGTACTCTCA 59.522 40.000 27.02 14.97 42.66 3.27
5290 5675 5.960113 TCATTTGAGCTCAAGAGTACTCTC 58.040 41.667 27.02 12.98 39.39 3.20
5381 5768 6.876257 ACAAAAATTTGCAAACACCTAGAACA 59.124 30.769 15.41 0.00 41.79 3.18
5382 5769 7.064016 TGACAAAAATTTGCAAACACCTAGAAC 59.936 33.333 15.41 2.75 41.79 3.01
5383 5770 7.099764 TGACAAAAATTTGCAAACACCTAGAA 58.900 30.769 15.41 0.00 41.79 2.10
5384 5771 6.634805 TGACAAAAATTTGCAAACACCTAGA 58.365 32.000 15.41 0.00 41.79 2.43
5385 5772 6.900568 TGACAAAAATTTGCAAACACCTAG 57.099 33.333 15.41 5.96 41.79 3.02
5386 5773 7.044181 TCATGACAAAAATTTGCAAACACCTA 58.956 30.769 15.41 0.00 41.79 3.08
5387 5774 5.879223 TCATGACAAAAATTTGCAAACACCT 59.121 32.000 15.41 0.00 41.79 4.00
5388 5775 6.036953 TCTCATGACAAAAATTTGCAAACACC 59.963 34.615 15.41 0.75 41.79 4.16
5389 5776 7.002816 TCTCATGACAAAAATTTGCAAACAC 57.997 32.000 15.41 2.08 41.79 3.32
5390 5777 7.494952 TGATCTCATGACAAAAATTTGCAAACA 59.505 29.630 15.41 6.43 41.79 2.83
5391 5778 7.795272 GTGATCTCATGACAAAAATTTGCAAAC 59.205 33.333 15.41 0.00 41.79 2.93
5392 5779 7.494952 TGTGATCTCATGACAAAAATTTGCAAA 59.505 29.630 15.44 15.44 41.79 3.68
5393 5780 6.985059 TGTGATCTCATGACAAAAATTTGCAA 59.015 30.769 5.82 0.00 41.79 4.08
5394 5781 6.514063 TGTGATCTCATGACAAAAATTTGCA 58.486 32.000 5.82 5.81 41.79 4.08
5395 5782 7.591006 ATGTGATCTCATGACAAAAATTTGC 57.409 32.000 9.41 0.62 41.79 3.68
5399 5786 9.850628 CAACTAATGTGATCTCATGACAAAAAT 57.149 29.630 10.87 0.00 0.00 1.82
5400 5787 9.065798 TCAACTAATGTGATCTCATGACAAAAA 57.934 29.630 10.87 0.00 0.00 1.94
5401 5788 8.620116 TCAACTAATGTGATCTCATGACAAAA 57.380 30.769 10.87 0.00 0.00 2.44
5402 5789 8.620116 TTCAACTAATGTGATCTCATGACAAA 57.380 30.769 10.87 0.28 0.00 2.83
5403 5790 7.335171 CCTTCAACTAATGTGATCTCATGACAA 59.665 37.037 10.87 0.00 0.00 3.18
5404 5791 6.820152 CCTTCAACTAATGTGATCTCATGACA 59.180 38.462 10.87 0.00 0.00 3.58
5405 5792 6.820656 ACCTTCAACTAATGTGATCTCATGAC 59.179 38.462 10.87 0.00 0.00 3.06
5406 5793 6.820152 CACCTTCAACTAATGTGATCTCATGA 59.180 38.462 10.87 2.97 36.20 3.07
5407 5794 6.596888 ACACCTTCAACTAATGTGATCTCATG 59.403 38.462 10.87 2.78 37.22 3.07
5408 5795 6.596888 CACACCTTCAACTAATGTGATCTCAT 59.403 38.462 4.42 4.42 42.63 2.90
5409 5796 5.934043 CACACCTTCAACTAATGTGATCTCA 59.066 40.000 0.00 0.00 42.63 3.27
5410 5797 5.352569 CCACACCTTCAACTAATGTGATCTC 59.647 44.000 4.30 0.00 42.63 2.75
5411 5798 5.248640 CCACACCTTCAACTAATGTGATCT 58.751 41.667 4.30 0.00 42.63 2.75
5412 5799 4.142600 GCCACACCTTCAACTAATGTGATC 60.143 45.833 4.30 0.00 42.63 2.92
5413 5800 3.758554 GCCACACCTTCAACTAATGTGAT 59.241 43.478 4.30 0.00 42.63 3.06
5414 5801 3.146066 GCCACACCTTCAACTAATGTGA 58.854 45.455 4.30 0.00 42.63 3.58
5415 5802 2.884012 TGCCACACCTTCAACTAATGTG 59.116 45.455 0.00 0.00 39.03 3.21
5416 5803 3.222173 TGCCACACCTTCAACTAATGT 57.778 42.857 0.00 0.00 0.00 2.71
5417 5804 4.582701 TTTGCCACACCTTCAACTAATG 57.417 40.909 0.00 0.00 0.00 1.90
5418 5805 5.606348 TTTTTGCCACACCTTCAACTAAT 57.394 34.783 0.00 0.00 0.00 1.73
5439 5826 2.874086 GCATTTTGCAGCACTCCTTTTT 59.126 40.909 0.00 0.00 44.26 1.94
5440 5827 2.486918 GCATTTTGCAGCACTCCTTTT 58.513 42.857 0.00 0.00 44.26 2.27
5441 5828 2.159327 GCATTTTGCAGCACTCCTTT 57.841 45.000 0.00 0.00 44.26 3.11
5442 5829 3.900446 GCATTTTGCAGCACTCCTT 57.100 47.368 0.00 0.00 44.26 3.36
5459 5846 6.309009 GCTCCTAAAATGCTACTTTCAAAAGC 59.691 38.462 2.43 0.00 39.63 3.51
5460 5847 7.370383 TGCTCCTAAAATGCTACTTTCAAAAG 58.630 34.615 0.97 0.97 41.73 2.27
5461 5848 7.283625 TGCTCCTAAAATGCTACTTTCAAAA 57.716 32.000 0.00 0.00 0.00 2.44
5462 5849 6.892658 TGCTCCTAAAATGCTACTTTCAAA 57.107 33.333 0.00 0.00 0.00 2.69
5463 5850 6.658816 TGATGCTCCTAAAATGCTACTTTCAA 59.341 34.615 0.00 0.00 0.00 2.69
5464 5851 6.179756 TGATGCTCCTAAAATGCTACTTTCA 58.820 36.000 0.00 0.00 0.00 2.69
5465 5852 6.683974 TGATGCTCCTAAAATGCTACTTTC 57.316 37.500 0.00 0.00 0.00 2.62
5466 5853 7.651027 ATTGATGCTCCTAAAATGCTACTTT 57.349 32.000 0.00 0.00 0.00 2.66
5467 5854 7.651027 AATTGATGCTCCTAAAATGCTACTT 57.349 32.000 0.00 0.00 0.00 2.24
5468 5855 7.651027 AAATTGATGCTCCTAAAATGCTACT 57.349 32.000 0.00 0.00 0.00 2.57
5469 5856 7.761249 ACAAAATTGATGCTCCTAAAATGCTAC 59.239 33.333 0.00 0.00 0.00 3.58
5470 5857 7.839907 ACAAAATTGATGCTCCTAAAATGCTA 58.160 30.769 0.00 0.00 0.00 3.49
5471 5858 6.704310 ACAAAATTGATGCTCCTAAAATGCT 58.296 32.000 0.00 0.00 0.00 3.79
5472 5859 6.973229 ACAAAATTGATGCTCCTAAAATGC 57.027 33.333 0.00 0.00 0.00 3.56
5473 5860 8.991026 TGAAACAAAATTGATGCTCCTAAAATG 58.009 29.630 0.00 0.00 0.00 2.32
5474 5861 9.729281 ATGAAACAAAATTGATGCTCCTAAAAT 57.271 25.926 0.00 0.00 0.00 1.82
5475 5862 9.558396 AATGAAACAAAATTGATGCTCCTAAAA 57.442 25.926 0.00 0.00 0.00 1.52
5476 5863 8.991026 CAATGAAACAAAATTGATGCTCCTAAA 58.009 29.630 0.00 0.00 36.13 1.85
5477 5864 7.603404 CCAATGAAACAAAATTGATGCTCCTAA 59.397 33.333 0.00 0.00 36.13 2.69
5478 5865 7.098477 CCAATGAAACAAAATTGATGCTCCTA 58.902 34.615 0.00 0.00 36.13 2.94
5479 5866 5.935789 CCAATGAAACAAAATTGATGCTCCT 59.064 36.000 0.00 0.00 36.13 3.69
5480 5867 5.702209 ACCAATGAAACAAAATTGATGCTCC 59.298 36.000 0.00 0.00 36.13 4.70
5481 5868 6.424509 TGACCAATGAAACAAAATTGATGCTC 59.575 34.615 0.00 0.00 36.13 4.26
5482 5869 6.203338 GTGACCAATGAAACAAAATTGATGCT 59.797 34.615 0.00 0.00 36.13 3.79
5483 5870 6.018098 TGTGACCAATGAAACAAAATTGATGC 60.018 34.615 0.00 0.00 36.13 3.91
5484 5871 7.479897 TGTGACCAATGAAACAAAATTGATG 57.520 32.000 0.00 0.00 36.13 3.07
5485 5872 7.769970 AGTTGTGACCAATGAAACAAAATTGAT 59.230 29.630 0.00 0.00 36.13 2.57
5486 5873 7.102346 AGTTGTGACCAATGAAACAAAATTGA 58.898 30.769 0.00 0.00 36.13 2.57
5487 5874 7.306205 AGTTGTGACCAATGAAACAAAATTG 57.694 32.000 0.00 0.00 34.54 2.32
5488 5875 7.065683 GGAAGTTGTGACCAATGAAACAAAATT 59.934 33.333 0.00 0.00 34.54 1.82
5489 5876 6.538381 GGAAGTTGTGACCAATGAAACAAAAT 59.462 34.615 0.00 0.00 34.54 1.82
5490 5877 5.872070 GGAAGTTGTGACCAATGAAACAAAA 59.128 36.000 0.00 0.00 34.54 2.44
5491 5878 5.047021 TGGAAGTTGTGACCAATGAAACAAA 60.047 36.000 0.00 0.00 34.54 2.83
5492 5879 4.464244 TGGAAGTTGTGACCAATGAAACAA 59.536 37.500 0.00 0.00 32.11 2.83
5493 5880 4.019858 TGGAAGTTGTGACCAATGAAACA 58.980 39.130 0.00 0.00 32.11 2.83
5494 5881 4.142271 TGTGGAAGTTGTGACCAATGAAAC 60.142 41.667 0.00 0.00 35.40 2.78
5495 5882 4.019858 TGTGGAAGTTGTGACCAATGAAA 58.980 39.130 0.00 0.00 35.40 2.69
5496 5883 3.625853 TGTGGAAGTTGTGACCAATGAA 58.374 40.909 0.00 0.00 35.40 2.57
5497 5884 3.289407 TGTGGAAGTTGTGACCAATGA 57.711 42.857 0.00 0.00 35.40 2.57
5498 5885 4.383850 TTTGTGGAAGTTGTGACCAATG 57.616 40.909 0.00 0.00 35.40 2.82
5499 5886 5.612725 AATTTGTGGAAGTTGTGACCAAT 57.387 34.783 0.00 0.00 35.40 3.16
5500 5887 5.047021 TCAAATTTGTGGAAGTTGTGACCAA 60.047 36.000 17.47 0.00 42.36 3.67
5501 5888 4.464244 TCAAATTTGTGGAAGTTGTGACCA 59.536 37.500 17.47 0.00 42.36 4.02
5502 5889 5.004922 TCAAATTTGTGGAAGTTGTGACC 57.995 39.130 17.47 0.00 42.36 4.02
5503 5890 6.507023 AGATCAAATTTGTGGAAGTTGTGAC 58.493 36.000 17.47 0.00 42.36 3.67
5504 5891 6.320926 TGAGATCAAATTTGTGGAAGTTGTGA 59.679 34.615 17.47 0.00 42.36 3.58
5505 5892 6.506147 TGAGATCAAATTTGTGGAAGTTGTG 58.494 36.000 17.47 0.00 42.36 3.33
5506 5893 6.713762 TGAGATCAAATTTGTGGAAGTTGT 57.286 33.333 17.47 0.00 42.36 3.32
5507 5894 7.372714 TCATGAGATCAAATTTGTGGAAGTTG 58.627 34.615 17.47 9.00 42.93 3.16
5508 5895 7.528996 TCATGAGATCAAATTTGTGGAAGTT 57.471 32.000 17.47 0.00 0.00 2.66
5509 5896 7.713734 ATCATGAGATCAAATTTGTGGAAGT 57.286 32.000 17.47 0.00 0.00 3.01
5521 5908 9.687210 GCTTGCAAATATTTATCATGAGATCAA 57.313 29.630 0.00 0.00 35.67 2.57
5522 5909 8.852135 TGCTTGCAAATATTTATCATGAGATCA 58.148 29.630 0.00 0.00 35.67 2.92
5523 5910 9.125906 GTGCTTGCAAATATTTATCATGAGATC 57.874 33.333 0.00 0.00 35.67 2.75
5524 5911 8.857098 AGTGCTTGCAAATATTTATCATGAGAT 58.143 29.630 0.00 0.00 38.29 2.75
5525 5912 8.229253 AGTGCTTGCAAATATTTATCATGAGA 57.771 30.769 0.00 0.00 0.00 3.27
5526 5913 8.867112 AAGTGCTTGCAAATATTTATCATGAG 57.133 30.769 0.00 0.00 0.00 2.90
5527 5914 9.955208 CTAAGTGCTTGCAAATATTTATCATGA 57.045 29.630 0.00 0.00 0.00 3.07
5528 5915 9.955208 TCTAAGTGCTTGCAAATATTTATCATG 57.045 29.630 0.00 5.92 0.00 3.07
5530 5917 9.787532 GTTCTAAGTGCTTGCAAATATTTATCA 57.212 29.630 0.00 0.00 0.00 2.15
5531 5918 9.237846 GGTTCTAAGTGCTTGCAAATATTTATC 57.762 33.333 0.00 0.00 0.00 1.75
5532 5919 8.971073 AGGTTCTAAGTGCTTGCAAATATTTAT 58.029 29.630 0.00 0.00 0.00 1.40
5533 5920 8.348285 AGGTTCTAAGTGCTTGCAAATATTTA 57.652 30.769 0.00 0.00 0.00 1.40
5534 5921 7.232118 AGGTTCTAAGTGCTTGCAAATATTT 57.768 32.000 0.00 0.00 0.00 1.40
5535 5922 6.840780 AGGTTCTAAGTGCTTGCAAATATT 57.159 33.333 0.00 0.00 0.00 1.28
5536 5923 6.660949 AGAAGGTTCTAAGTGCTTGCAAATAT 59.339 34.615 0.00 0.00 35.34 1.28
5537 5924 6.003950 AGAAGGTTCTAAGTGCTTGCAAATA 58.996 36.000 0.00 0.00 35.34 1.40
5538 5925 4.829492 AGAAGGTTCTAAGTGCTTGCAAAT 59.171 37.500 0.00 0.00 35.34 2.32
5539 5926 4.207165 AGAAGGTTCTAAGTGCTTGCAAA 58.793 39.130 0.00 0.00 35.34 3.68
5540 5927 3.820557 AGAAGGTTCTAAGTGCTTGCAA 58.179 40.909 0.00 0.00 35.34 4.08
5541 5928 3.492102 AGAAGGTTCTAAGTGCTTGCA 57.508 42.857 0.00 0.00 35.34 4.08
5542 5929 6.502136 AAATAGAAGGTTCTAAGTGCTTGC 57.498 37.500 3.60 0.00 42.55 4.01
5564 5951 1.413445 AGGCTTCACTGCATGCAAAAA 59.587 42.857 22.88 14.31 34.04 1.94
5565 5952 1.042229 AGGCTTCACTGCATGCAAAA 58.958 45.000 22.88 14.66 34.04 2.44
5566 5953 1.000060 GAAGGCTTCACTGCATGCAAA 60.000 47.619 22.88 12.39 34.04 3.68
5567 5954 0.599558 GAAGGCTTCACTGCATGCAA 59.400 50.000 22.88 3.76 34.04 4.08
5568 5955 0.251033 AGAAGGCTTCACTGCATGCA 60.251 50.000 27.70 21.29 34.04 3.96
5569 5956 0.886563 AAGAAGGCTTCACTGCATGC 59.113 50.000 27.70 11.82 34.04 4.06
5570 5957 3.655276 AAAAGAAGGCTTCACTGCATG 57.345 42.857 27.70 0.00 31.82 4.06
5588 5975 8.218338 ACAATTTTGATAATGTGGCACAAAAA 57.782 26.923 25.95 23.67 44.16 1.94
5589 5976 7.714377 AGACAATTTTGATAATGTGGCACAAAA 59.286 29.630 25.95 18.66 44.16 2.44
5590 5977 7.215789 AGACAATTTTGATAATGTGGCACAAA 58.784 30.769 25.95 16.20 44.16 2.83
5591 5978 6.757237 AGACAATTTTGATAATGTGGCACAA 58.243 32.000 25.95 9.76 44.16 3.33
5592 5979 6.343716 AGACAATTTTGATAATGTGGCACA 57.656 33.333 24.36 24.36 0.00 4.57
5593 5980 7.538575 ACTAGACAATTTTGATAATGTGGCAC 58.461 34.615 11.55 11.55 0.00 5.01
5594 5981 7.701539 ACTAGACAATTTTGATAATGTGGCA 57.298 32.000 0.00 0.00 0.00 4.92
5613 6000 9.929180 GCAATGGAAGTATCATACATAACTAGA 57.071 33.333 0.00 0.00 0.00 2.43
5614 6001 8.864024 CGCAATGGAAGTATCATACATAACTAG 58.136 37.037 0.00 0.00 0.00 2.57
5615 6002 7.817478 CCGCAATGGAAGTATCATACATAACTA 59.183 37.037 0.00 0.00 42.00 2.24
5616 6003 6.650807 CCGCAATGGAAGTATCATACATAACT 59.349 38.462 0.00 0.00 42.00 2.24
5617 6004 6.649141 TCCGCAATGGAAGTATCATACATAAC 59.351 38.462 0.00 0.00 46.38 1.89
5618 6005 6.764379 TCCGCAATGGAAGTATCATACATAA 58.236 36.000 0.00 0.00 46.38 1.90
5619 6006 6.353404 TCCGCAATGGAAGTATCATACATA 57.647 37.500 0.00 0.00 46.38 2.29
5620 6007 5.227569 TCCGCAATGGAAGTATCATACAT 57.772 39.130 0.00 0.00 46.38 2.29
5621 6008 4.681074 TCCGCAATGGAAGTATCATACA 57.319 40.909 0.00 0.00 46.38 2.29
5633 6020 3.331150 TGTACTAAGTTGTCCGCAATGG 58.669 45.455 0.00 0.00 36.92 3.16
5634 6021 4.378046 GGTTGTACTAAGTTGTCCGCAATG 60.378 45.833 0.00 0.00 36.92 2.82
5635 6022 3.749609 GGTTGTACTAAGTTGTCCGCAAT 59.250 43.478 0.00 0.00 36.92 3.56
5636 6023 3.132925 GGTTGTACTAAGTTGTCCGCAA 58.867 45.455 0.00 0.00 0.00 4.85
5637 6024 2.366266 AGGTTGTACTAAGTTGTCCGCA 59.634 45.455 0.00 0.00 0.00 5.69
5638 6025 3.036075 AGGTTGTACTAAGTTGTCCGC 57.964 47.619 0.00 0.00 0.00 5.54
5639 6026 5.382618 AGTAGGTTGTACTAAGTTGTCCG 57.617 43.478 0.00 0.00 0.00 4.79
5640 6027 7.177392 TCCTAAGTAGGTTGTACTAAGTTGTCC 59.823 40.741 4.30 0.00 44.02 4.02
5641 6028 8.115490 TCCTAAGTAGGTTGTACTAAGTTGTC 57.885 38.462 4.30 0.00 44.02 3.18
5642 6029 7.727634 ACTCCTAAGTAGGTTGTACTAAGTTGT 59.272 37.037 4.30 0.00 44.02 3.32
5643 6030 8.120140 ACTCCTAAGTAGGTTGTACTAAGTTG 57.880 38.462 4.30 0.00 44.02 3.16
5644 6031 8.583296 CAACTCCTAAGTAGGTTGTACTAAGTT 58.417 37.037 4.30 2.04 44.02 2.66
5645 6032 7.178097 CCAACTCCTAAGTAGGTTGTACTAAGT 59.822 40.741 4.30 0.00 44.02 2.24
5646 6033 7.178097 ACCAACTCCTAAGTAGGTTGTACTAAG 59.822 40.741 4.30 0.00 44.02 2.18
5647 6034 7.012607 ACCAACTCCTAAGTAGGTTGTACTAA 58.987 38.462 4.30 0.00 44.02 2.24
5648 6035 6.555711 ACCAACTCCTAAGTAGGTTGTACTA 58.444 40.000 4.30 0.00 44.02 1.82
5649 6036 5.400870 ACCAACTCCTAAGTAGGTTGTACT 58.599 41.667 4.30 0.00 44.02 2.73
5650 6037 5.735285 ACCAACTCCTAAGTAGGTTGTAC 57.265 43.478 4.30 0.00 44.02 2.90
5651 6038 6.105397 CAACCAACTCCTAAGTAGGTTGTA 57.895 41.667 12.61 0.00 46.62 2.41
5652 6039 4.969484 CAACCAACTCCTAAGTAGGTTGT 58.031 43.478 12.61 2.84 46.62 3.32
5654 6041 4.286291 CCTCAACCAACTCCTAAGTAGGTT 59.714 45.833 4.30 0.00 44.02 3.50
5655 6042 3.838903 CCTCAACCAACTCCTAAGTAGGT 59.161 47.826 4.30 0.00 44.02 3.08
5656 6043 3.197983 CCCTCAACCAACTCCTAAGTAGG 59.802 52.174 0.00 0.00 45.02 3.18
5657 6044 3.197983 CCCCTCAACCAACTCCTAAGTAG 59.802 52.174 0.00 0.00 33.48 2.57
5658 6045 3.178865 CCCCTCAACCAACTCCTAAGTA 58.821 50.000 0.00 0.00 33.48 2.24
5659 6046 1.985895 CCCCTCAACCAACTCCTAAGT 59.014 52.381 0.00 0.00 37.32 2.24
5660 6047 1.985895 ACCCCTCAACCAACTCCTAAG 59.014 52.381 0.00 0.00 0.00 2.18
5661 6048 1.982958 GACCCCTCAACCAACTCCTAA 59.017 52.381 0.00 0.00 0.00 2.69
5662 6049 1.132657 TGACCCCTCAACCAACTCCTA 60.133 52.381 0.00 0.00 0.00 2.94
5663 6050 0.401395 TGACCCCTCAACCAACTCCT 60.401 55.000 0.00 0.00 0.00 3.69
5664 6051 0.250770 GTGACCCCTCAACCAACTCC 60.251 60.000 0.00 0.00 0.00 3.85
5665 6052 0.765510 AGTGACCCCTCAACCAACTC 59.234 55.000 0.00 0.00 0.00 3.01
5666 6053 1.143073 GAAGTGACCCCTCAACCAACT 59.857 52.381 0.00 0.00 0.00 3.16
5667 6054 1.133915 TGAAGTGACCCCTCAACCAAC 60.134 52.381 0.00 0.00 0.00 3.77
5668 6055 1.217916 TGAAGTGACCCCTCAACCAA 58.782 50.000 0.00 0.00 0.00 3.67
5669 6056 1.444933 ATGAAGTGACCCCTCAACCA 58.555 50.000 0.00 0.00 0.00 3.67
5670 6057 2.586648 AATGAAGTGACCCCTCAACC 57.413 50.000 0.00 0.00 0.00 3.77
5671 6058 6.590234 ATTTTAATGAAGTGACCCCTCAAC 57.410 37.500 0.00 0.00 0.00 3.18
5672 6059 6.553100 ACAATTTTAATGAAGTGACCCCTCAA 59.447 34.615 0.00 0.00 0.00 3.02
5673 6060 6.074648 ACAATTTTAATGAAGTGACCCCTCA 58.925 36.000 0.00 0.00 0.00 3.86
5674 6061 6.434340 AGACAATTTTAATGAAGTGACCCCTC 59.566 38.462 0.00 0.00 0.00 4.30
5675 6062 6.314917 AGACAATTTTAATGAAGTGACCCCT 58.685 36.000 0.00 0.00 0.00 4.79
5676 6063 6.590234 AGACAATTTTAATGAAGTGACCCC 57.410 37.500 0.00 0.00 0.00 4.95
5677 6064 7.433680 ACAAGACAATTTTAATGAAGTGACCC 58.566 34.615 0.00 0.00 0.00 4.46
5678 6065 8.755018 CAACAAGACAATTTTAATGAAGTGACC 58.245 33.333 0.00 0.00 0.00 4.02
5679 6066 9.515020 TCAACAAGACAATTTTAATGAAGTGAC 57.485 29.630 0.00 0.00 0.00 3.67
5680 6067 9.515020 GTCAACAAGACAATTTTAATGAAGTGA 57.485 29.630 0.00 0.00 46.77 3.41
5696 6083 8.935844 TTGAAGTATCATACATGTCAACAAGAC 58.064 33.333 0.00 0.00 40.59 3.01
5697 6084 9.671279 ATTGAAGTATCATACATGTCAACAAGA 57.329 29.630 0.00 0.00 34.96 3.02
5708 6095 9.337396 GGTTGTCCATAATTGAAGTATCATACA 57.663 33.333 0.00 0.00 34.96 2.29
5709 6096 9.561069 AGGTTGTCCATAATTGAAGTATCATAC 57.439 33.333 0.00 0.00 33.83 2.39
5712 6099 9.613428 CTAAGGTTGTCCATAATTGAAGTATCA 57.387 33.333 0.00 0.00 35.89 2.15
5713 6100 9.614792 ACTAAGGTTGTCCATAATTGAAGTATC 57.385 33.333 0.00 0.00 35.89 2.24
5714 6101 9.396022 CACTAAGGTTGTCCATAATTGAAGTAT 57.604 33.333 0.00 0.00 35.89 2.12
5715 6102 8.380099 ACACTAAGGTTGTCCATAATTGAAGTA 58.620 33.333 0.00 0.00 35.89 2.24
5716 6103 7.231467 ACACTAAGGTTGTCCATAATTGAAGT 58.769 34.615 0.00 0.00 35.89 3.01
5717 6104 7.687941 ACACTAAGGTTGTCCATAATTGAAG 57.312 36.000 0.00 0.00 35.89 3.02
5718 6105 9.005777 GTAACACTAAGGTTGTCCATAATTGAA 57.994 33.333 0.00 0.00 35.89 2.69
5719 6106 8.158132 TGTAACACTAAGGTTGTCCATAATTGA 58.842 33.333 0.00 0.00 35.89 2.57
5720 6107 8.330466 TGTAACACTAAGGTTGTCCATAATTG 57.670 34.615 0.00 0.00 35.89 2.32
5721 6108 8.161425 ACTGTAACACTAAGGTTGTCCATAATT 58.839 33.333 0.00 0.00 35.89 1.40
5722 6109 7.686434 ACTGTAACACTAAGGTTGTCCATAAT 58.314 34.615 0.00 0.00 35.89 1.28
5723 6110 7.069877 ACTGTAACACTAAGGTTGTCCATAA 57.930 36.000 0.00 0.00 35.89 1.90
5724 6111 6.675413 ACTGTAACACTAAGGTTGTCCATA 57.325 37.500 0.00 0.00 35.89 2.74
5725 6112 5.562298 ACTGTAACACTAAGGTTGTCCAT 57.438 39.130 0.00 0.00 35.89 3.41
5726 6113 6.482898 TTACTGTAACACTAAGGTTGTCCA 57.517 37.500 0.00 0.00 35.89 4.02
5727 6114 7.280652 TGTTTTACTGTAACACTAAGGTTGTCC 59.719 37.037 15.50 0.00 30.96 4.02
5728 6115 8.200364 TGTTTTACTGTAACACTAAGGTTGTC 57.800 34.615 15.50 0.00 30.96 3.18
5729 6116 8.564509 TTGTTTTACTGTAACACTAAGGTTGT 57.435 30.769 15.50 0.00 35.39 3.32
5730 6117 9.843334 TTTTGTTTTACTGTAACACTAAGGTTG 57.157 29.630 15.50 0.00 35.39 3.77
5743 6130 9.097257 CACTTCCATTCATTTTTGTTTTACTGT 57.903 29.630 0.00 0.00 0.00 3.55
5744 6131 9.311916 TCACTTCCATTCATTTTTGTTTTACTG 57.688 29.630 0.00 0.00 0.00 2.74
5745 6132 9.883142 TTCACTTCCATTCATTTTTGTTTTACT 57.117 25.926 0.00 0.00 0.00 2.24
5748 6135 8.623030 CCATTCACTTCCATTCATTTTTGTTTT 58.377 29.630 0.00 0.00 0.00 2.43
5749 6136 7.992033 TCCATTCACTTCCATTCATTTTTGTTT 59.008 29.630 0.00 0.00 0.00 2.83
5750 6137 7.507829 TCCATTCACTTCCATTCATTTTTGTT 58.492 30.769 0.00 0.00 0.00 2.83
5751 6138 7.065120 TCCATTCACTTCCATTCATTTTTGT 57.935 32.000 0.00 0.00 0.00 2.83
5752 6139 7.820386 TCATCCATTCACTTCCATTCATTTTTG 59.180 33.333 0.00 0.00 0.00 2.44
5753 6140 7.909518 TCATCCATTCACTTCCATTCATTTTT 58.090 30.769 0.00 0.00 0.00 1.94
5754 6141 7.484993 TCATCCATTCACTTCCATTCATTTT 57.515 32.000 0.00 0.00 0.00 1.82
5755 6142 7.670605 ATCATCCATTCACTTCCATTCATTT 57.329 32.000 0.00 0.00 0.00 2.32
5756 6143 7.670605 AATCATCCATTCACTTCCATTCATT 57.329 32.000 0.00 0.00 0.00 2.57
5757 6144 8.003044 ACTAATCATCCATTCACTTCCATTCAT 58.997 33.333 0.00 0.00 0.00 2.57
5758 6145 7.348815 ACTAATCATCCATTCACTTCCATTCA 58.651 34.615 0.00 0.00 0.00 2.57
5759 6146 7.040823 GGACTAATCATCCATTCACTTCCATTC 60.041 40.741 0.00 0.00 36.15 2.67
5760 6147 6.774656 GGACTAATCATCCATTCACTTCCATT 59.225 38.462 0.00 0.00 36.15 3.16
5761 6148 6.102321 AGGACTAATCATCCATTCACTTCCAT 59.898 38.462 0.00 0.00 38.86 3.41
5762 6149 5.429762 AGGACTAATCATCCATTCACTTCCA 59.570 40.000 0.00 0.00 38.86 3.53
5763 6150 5.762218 CAGGACTAATCATCCATTCACTTCC 59.238 44.000 0.00 0.00 38.86 3.46
5764 6151 5.762218 CCAGGACTAATCATCCATTCACTTC 59.238 44.000 0.00 0.00 38.86 3.01
5765 6152 5.192522 ACCAGGACTAATCATCCATTCACTT 59.807 40.000 0.00 0.00 38.86 3.16
5766 6153 4.723789 ACCAGGACTAATCATCCATTCACT 59.276 41.667 0.00 0.00 38.86 3.41
5767 6154 5.041191 ACCAGGACTAATCATCCATTCAC 57.959 43.478 0.00 0.00 38.86 3.18
5768 6155 5.429762 AGAACCAGGACTAATCATCCATTCA 59.570 40.000 0.00 0.00 38.86 2.57
5769 6156 5.934781 AGAACCAGGACTAATCATCCATTC 58.065 41.667 0.00 0.00 38.86 2.67
5770 6157 5.983333 AGAACCAGGACTAATCATCCATT 57.017 39.130 0.00 0.00 38.86 3.16
5771 6158 7.293299 TCAATAGAACCAGGACTAATCATCCAT 59.707 37.037 0.00 0.00 38.86 3.41
5772 6159 6.615316 TCAATAGAACCAGGACTAATCATCCA 59.385 38.462 0.00 0.00 38.86 3.41
5773 6160 7.067496 TCAATAGAACCAGGACTAATCATCC 57.933 40.000 0.00 0.00 36.38 3.51
5774 6161 9.213799 GAATCAATAGAACCAGGACTAATCATC 57.786 37.037 0.00 0.00 0.00 2.92
5775 6162 8.943085 AGAATCAATAGAACCAGGACTAATCAT 58.057 33.333 0.00 0.00 0.00 2.45
5776 6163 8.324191 AGAATCAATAGAACCAGGACTAATCA 57.676 34.615 0.00 0.00 0.00 2.57
5780 6167 9.268282 ACTTAAGAATCAATAGAACCAGGACTA 57.732 33.333 10.09 0.00 0.00 2.59
5781 6168 8.152023 ACTTAAGAATCAATAGAACCAGGACT 57.848 34.615 10.09 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.