Multiple sequence alignment - TraesCS4A01G158600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G158600 chr4A 100.000 2288 0 0 1 2288 327748380 327746093 0.000000e+00 4226.0
1 TraesCS4A01G158600 chr3A 93.519 1728 111 1 2 1728 418765665 418763938 0.000000e+00 2569.0
2 TraesCS4A01G158600 chr4D 92.622 1735 116 8 1 1730 493971115 493969388 0.000000e+00 2484.0
3 TraesCS4A01G158600 chr4D 92.423 1729 124 5 1 1728 116524563 116522841 0.000000e+00 2460.0
4 TraesCS4A01G158600 chr4D 92.254 1730 131 3 2 1730 421048641 421046914 0.000000e+00 2449.0
5 TraesCS4A01G158600 chr4D 92.303 1728 119 9 1 1725 48683934 48682218 0.000000e+00 2442.0
6 TraesCS4A01G158600 chr4D 92.379 433 26 2 1860 2286 139300637 139301068 5.400000e-171 610.0
7 TraesCS4A01G158600 chr7D 92.250 1729 133 1 1 1729 432740549 432738822 0.000000e+00 2449.0
8 TraesCS4A01G158600 chr1A 92.152 1733 124 8 1 1728 327011924 327010199 0.000000e+00 2436.0
9 TraesCS4A01G158600 chr5A 92.023 1730 135 3 1 1729 604232066 604230339 0.000000e+00 2427.0
10 TraesCS4A01G158600 chr2B 91.317 1739 141 7 1 1733 713704748 713703014 0.000000e+00 2366.0
11 TraesCS4A01G158600 chrUn 92.431 436 25 3 1860 2288 322877088 322876654 1.160000e-172 616.0
12 TraesCS4A01G158600 chr6B 97.222 36 1 0 1794 1829 54864503 54864538 6.820000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G158600 chr4A 327746093 327748380 2287 True 4226 4226 100.000 1 2288 1 chr4A.!!$R1 2287
1 TraesCS4A01G158600 chr3A 418763938 418765665 1727 True 2569 2569 93.519 2 1728 1 chr3A.!!$R1 1726
2 TraesCS4A01G158600 chr4D 493969388 493971115 1727 True 2484 2484 92.622 1 1730 1 chr4D.!!$R4 1729
3 TraesCS4A01G158600 chr4D 116522841 116524563 1722 True 2460 2460 92.423 1 1728 1 chr4D.!!$R2 1727
4 TraesCS4A01G158600 chr4D 421046914 421048641 1727 True 2449 2449 92.254 2 1730 1 chr4D.!!$R3 1728
5 TraesCS4A01G158600 chr4D 48682218 48683934 1716 True 2442 2442 92.303 1 1725 1 chr4D.!!$R1 1724
6 TraesCS4A01G158600 chr7D 432738822 432740549 1727 True 2449 2449 92.250 1 1729 1 chr7D.!!$R1 1728
7 TraesCS4A01G158600 chr1A 327010199 327011924 1725 True 2436 2436 92.152 1 1728 1 chr1A.!!$R1 1727
8 TraesCS4A01G158600 chr5A 604230339 604232066 1727 True 2427 2427 92.023 1 1729 1 chr5A.!!$R1 1728
9 TraesCS4A01G158600 chr2B 713703014 713704748 1734 True 2366 2366 91.317 1 1733 1 chr2B.!!$R1 1732

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
234 242 0.459585 GCGGCAAGACGGTCATTAGA 60.46 55.0 11.27 0.0 0.0 2.1 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1742 1763 0.026027 CTCAGCTTCGCGAATTCAGC 59.974 55.0 23.67 21.66 0.0 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
112 116 1.712018 CGATCTGCCAGGTACGACGA 61.712 60.000 0.00 0.00 0.00 4.20
123 127 3.610619 TACGACGACCTGGCTCCGA 62.611 63.158 0.00 0.00 0.00 4.55
162 166 0.615261 ACCGGTTCTTCCTCCTCCTC 60.615 60.000 0.00 0.00 0.00 3.71
172 178 1.336632 CCTCCTCCTCAGGCTTCCAG 61.337 65.000 0.00 0.00 40.12 3.86
221 229 0.530744 CTCCTAGTACACTGCGGCAA 59.469 55.000 3.44 0.00 0.00 4.52
234 242 0.459585 GCGGCAAGACGGTCATTAGA 60.460 55.000 11.27 0.00 0.00 2.10
616 628 0.794934 AGGGGGTGGGTAAGTAGTGA 59.205 55.000 0.00 0.00 0.00 3.41
643 655 2.969950 AGGGTGAGTAAATATAGGCGCA 59.030 45.455 10.83 0.00 0.00 6.09
647 659 4.994852 GGTGAGTAAATATAGGCGCAATGA 59.005 41.667 10.83 0.00 0.00 2.57
652 667 6.759272 AGTAAATATAGGCGCAATGAAGAGA 58.241 36.000 10.83 0.00 0.00 3.10
673 688 1.973515 AGGAAGAGTGACAGTCATGCA 59.026 47.619 6.51 0.00 0.00 3.96
679 694 3.562973 AGAGTGACAGTCATGCAGTTTTG 59.437 43.478 6.51 0.00 0.00 2.44
723 738 1.228063 AACTCTGTGCTGTGCCTGG 60.228 57.895 0.00 0.00 0.00 4.45
804 819 2.250939 TTGACAACGAGGGCAAGCG 61.251 57.895 0.00 0.00 0.00 4.68
837 852 4.982701 GCCCAAGGTGGTGCTGCT 62.983 66.667 0.00 0.00 35.17 4.24
908 924 1.856873 ATGGAGGAGCCCCCAACAA 60.857 57.895 0.00 0.00 35.85 2.83
969 985 2.033801 CCCAACTCACTTCTGCAAAGTG 59.966 50.000 24.10 24.10 46.67 3.16
1099 1116 1.639298 GGTGACGGTGAAGCTGATGC 61.639 60.000 0.00 0.00 40.05 3.91
1138 1155 2.121689 AGGGTTGGGCCACCTACA 60.122 61.111 13.77 0.00 43.22 2.74
1240 1257 0.612744 TGACGATGGCATTGAGGTGA 59.387 50.000 21.46 0.00 0.00 4.02
1252 1269 2.636647 TGAGGTGATCAACAAGTGCA 57.363 45.000 14.46 0.00 34.02 4.57
1290 1307 4.007323 ACCGCCAGGGACTAGGGT 62.007 66.667 0.00 0.00 43.47 4.34
1292 1309 2.363795 CGCCAGGGACTAGGGTCA 60.364 66.667 0.00 0.00 43.77 4.02
1340 1357 4.332543 CGAGTCTGCTTTATGGTTTATGCA 59.667 41.667 0.00 0.00 0.00 3.96
1425 1442 4.959596 AGTTGATGCTCTGTTTATGCTG 57.040 40.909 0.00 0.00 0.00 4.41
1514 1531 1.003118 GAGGTTATCACACACCAGGCA 59.997 52.381 0.00 0.00 35.25 4.75
1541 1559 2.672098 ACAACCAAACACCATGCCTTA 58.328 42.857 0.00 0.00 0.00 2.69
1602 1622 2.356278 GGTTCAGCCCATGCAGGA 59.644 61.111 0.00 0.00 41.22 3.86
1615 1635 2.768492 GCAGGAAAGAGGGCATGCG 61.768 63.158 12.44 0.00 0.00 4.73
1698 1718 3.118298 TGAGAAGGCTATACAATGCAGCA 60.118 43.478 0.00 0.00 37.02 4.41
1699 1719 3.474600 AGAAGGCTATACAATGCAGCAG 58.525 45.455 0.00 0.00 37.02 4.24
1733 1754 2.520741 CCAAACACGCCCTTGGGT 60.521 61.111 7.61 0.00 38.77 4.51
1734 1755 2.131067 CCAAACACGCCCTTGGGTT 61.131 57.895 7.61 0.00 38.77 4.11
1735 1756 1.362355 CAAACACGCCCTTGGGTTC 59.638 57.895 7.61 0.00 35.09 3.62
1736 1757 1.830847 AAACACGCCCTTGGGTTCC 60.831 57.895 7.61 0.00 35.09 3.62
1737 1758 2.575455 AAACACGCCCTTGGGTTCCA 62.575 55.000 7.61 0.00 35.09 3.53
1738 1759 2.672996 CACGCCCTTGGGTTCCAG 60.673 66.667 7.61 0.00 35.09 3.86
1739 1760 3.966543 ACGCCCTTGGGTTCCAGG 61.967 66.667 7.61 0.00 33.81 4.45
1740 1761 3.646715 CGCCCTTGGGTTCCAGGA 61.647 66.667 7.61 0.00 31.89 3.86
1741 1762 2.851045 GCCCTTGGGTTCCAGGAA 59.149 61.111 7.61 0.00 31.89 3.36
1742 1763 1.304464 GCCCTTGGGTTCCAGGAAG 60.304 63.158 0.54 0.00 31.89 3.46
1743 1764 1.304464 CCCTTGGGTTCCAGGAAGC 60.304 63.158 21.50 21.50 39.04 3.86
1744 1765 1.770324 CCTTGGGTTCCAGGAAGCT 59.230 57.895 26.93 0.00 39.61 3.74
1745 1766 0.610232 CCTTGGGTTCCAGGAAGCTG 60.610 60.000 26.93 17.81 39.61 4.24
1746 1767 0.401738 CTTGGGTTCCAGGAAGCTGA 59.598 55.000 26.93 16.25 39.61 4.26
1747 1768 0.850100 TTGGGTTCCAGGAAGCTGAA 59.150 50.000 26.93 18.16 39.61 3.02
1748 1769 1.075601 TGGGTTCCAGGAAGCTGAAT 58.924 50.000 26.93 0.00 39.61 2.57
1749 1770 1.428912 TGGGTTCCAGGAAGCTGAATT 59.571 47.619 26.93 0.00 39.61 2.17
1750 1771 2.095461 GGGTTCCAGGAAGCTGAATTC 58.905 52.381 26.93 8.96 39.61 2.17
1751 1772 1.740025 GGTTCCAGGAAGCTGAATTCG 59.260 52.381 22.19 0.00 37.13 3.34
1752 1773 1.131315 GTTCCAGGAAGCTGAATTCGC 59.869 52.381 0.54 12.44 0.00 4.70
1753 1774 0.740868 TCCAGGAAGCTGAATTCGCG 60.741 55.000 0.00 0.00 0.00 5.87
1754 1775 0.740868 CCAGGAAGCTGAATTCGCGA 60.741 55.000 3.71 3.71 0.00 5.87
1755 1776 1.078709 CAGGAAGCTGAATTCGCGAA 58.921 50.000 25.66 25.66 0.00 4.70
1756 1777 1.061711 CAGGAAGCTGAATTCGCGAAG 59.938 52.381 27.20 14.37 0.00 3.79
1770 1791 3.650409 CGAAGCTGAGCCGACTAAT 57.350 52.632 0.00 0.00 0.00 1.73
1771 1792 2.776312 CGAAGCTGAGCCGACTAATA 57.224 50.000 0.00 0.00 0.00 0.98
1772 1793 2.656085 CGAAGCTGAGCCGACTAATAG 58.344 52.381 0.00 0.00 0.00 1.73
1773 1794 2.033550 CGAAGCTGAGCCGACTAATAGT 59.966 50.000 0.00 0.00 0.00 2.12
1774 1795 3.376540 GAAGCTGAGCCGACTAATAGTG 58.623 50.000 0.00 0.00 0.00 2.74
1775 1796 1.067821 AGCTGAGCCGACTAATAGTGC 59.932 52.381 0.00 0.00 0.00 4.40
1776 1797 1.202417 GCTGAGCCGACTAATAGTGCA 60.202 52.381 0.00 0.00 0.00 4.57
1777 1798 2.738643 GCTGAGCCGACTAATAGTGCAA 60.739 50.000 0.00 0.00 0.00 4.08
1778 1799 3.521560 CTGAGCCGACTAATAGTGCAAA 58.478 45.455 0.00 0.00 0.00 3.68
1779 1800 3.932710 CTGAGCCGACTAATAGTGCAAAA 59.067 43.478 0.00 0.00 0.00 2.44
1780 1801 4.320023 TGAGCCGACTAATAGTGCAAAAA 58.680 39.130 0.00 0.00 0.00 1.94
1781 1802 4.153475 TGAGCCGACTAATAGTGCAAAAAC 59.847 41.667 0.00 0.00 0.00 2.43
1782 1803 3.124636 AGCCGACTAATAGTGCAAAAACG 59.875 43.478 0.00 0.00 0.00 3.60
1783 1804 3.123959 GCCGACTAATAGTGCAAAAACGA 59.876 43.478 0.00 0.00 0.00 3.85
1784 1805 4.724036 GCCGACTAATAGTGCAAAAACGAG 60.724 45.833 0.00 0.00 0.00 4.18
1785 1806 4.624024 CCGACTAATAGTGCAAAAACGAGA 59.376 41.667 0.00 0.00 0.00 4.04
1786 1807 5.119588 CCGACTAATAGTGCAAAAACGAGAA 59.880 40.000 0.00 0.00 0.00 2.87
1787 1808 6.234213 CGACTAATAGTGCAAAAACGAGAAG 58.766 40.000 0.00 0.00 0.00 2.85
1788 1809 5.928153 ACTAATAGTGCAAAAACGAGAAGC 58.072 37.500 0.00 0.00 0.00 3.86
1789 1810 4.829064 AATAGTGCAAAAACGAGAAGCA 57.171 36.364 0.00 0.00 0.00 3.91
1790 1811 4.829064 ATAGTGCAAAAACGAGAAGCAA 57.171 36.364 0.00 0.00 36.91 3.91
1791 1812 3.070429 AGTGCAAAAACGAGAAGCAAG 57.930 42.857 0.00 0.00 36.91 4.01
1792 1813 2.119457 GTGCAAAAACGAGAAGCAAGG 58.881 47.619 0.00 0.00 36.91 3.61
1793 1814 2.020720 TGCAAAAACGAGAAGCAAGGA 58.979 42.857 0.00 0.00 31.42 3.36
1794 1815 2.425312 TGCAAAAACGAGAAGCAAGGAA 59.575 40.909 0.00 0.00 31.42 3.36
1795 1816 3.045688 GCAAAAACGAGAAGCAAGGAAG 58.954 45.455 0.00 0.00 0.00 3.46
1796 1817 3.632189 CAAAAACGAGAAGCAAGGAAGG 58.368 45.455 0.00 0.00 0.00 3.46
1797 1818 1.239347 AAACGAGAAGCAAGGAAGGC 58.761 50.000 0.00 0.00 0.00 4.35
1798 1819 0.606673 AACGAGAAGCAAGGAAGGCC 60.607 55.000 0.00 0.00 0.00 5.19
1799 1820 1.746991 CGAGAAGCAAGGAAGGCCC 60.747 63.158 0.00 0.00 33.31 5.80
1807 1828 3.334054 AGGAAGGCCCTGCTCCAC 61.334 66.667 0.00 0.00 45.61 4.02
1808 1829 4.432741 GGAAGGCCCTGCTCCACC 62.433 72.222 0.00 0.00 0.00 4.61
1809 1830 3.650950 GAAGGCCCTGCTCCACCA 61.651 66.667 0.00 0.00 0.00 4.17
1810 1831 3.185203 AAGGCCCTGCTCCACCAA 61.185 61.111 0.00 0.00 0.00 3.67
1811 1832 2.713531 GAAGGCCCTGCTCCACCAAA 62.714 60.000 0.00 0.00 0.00 3.28
1812 1833 2.203625 GGCCCTGCTCCACCAAAA 60.204 61.111 0.00 0.00 0.00 2.44
1813 1834 1.836604 GGCCCTGCTCCACCAAAAA 60.837 57.895 0.00 0.00 0.00 1.94
1814 1835 1.667722 GCCCTGCTCCACCAAAAAG 59.332 57.895 0.00 0.00 0.00 2.27
1815 1836 0.827507 GCCCTGCTCCACCAAAAAGA 60.828 55.000 0.00 0.00 0.00 2.52
1816 1837 1.703411 CCCTGCTCCACCAAAAAGAA 58.297 50.000 0.00 0.00 0.00 2.52
1817 1838 2.038659 CCCTGCTCCACCAAAAAGAAA 58.961 47.619 0.00 0.00 0.00 2.52
1818 1839 2.433970 CCCTGCTCCACCAAAAAGAAAA 59.566 45.455 0.00 0.00 0.00 2.29
1819 1840 3.071457 CCCTGCTCCACCAAAAAGAAAAT 59.929 43.478 0.00 0.00 0.00 1.82
1820 1841 4.309933 CCTGCTCCACCAAAAAGAAAATC 58.690 43.478 0.00 0.00 0.00 2.17
1821 1842 4.039609 CCTGCTCCACCAAAAAGAAAATCT 59.960 41.667 0.00 0.00 0.00 2.40
1822 1843 4.947645 TGCTCCACCAAAAAGAAAATCTG 58.052 39.130 0.00 0.00 0.00 2.90
1823 1844 4.202243 TGCTCCACCAAAAAGAAAATCTGG 60.202 41.667 0.00 0.00 0.00 3.86
1824 1845 4.039124 GCTCCACCAAAAAGAAAATCTGGA 59.961 41.667 0.00 0.00 0.00 3.86
1825 1846 5.776744 CTCCACCAAAAAGAAAATCTGGAG 58.223 41.667 0.00 0.00 34.19 3.86
1826 1847 5.208121 TCCACCAAAAAGAAAATCTGGAGT 58.792 37.500 0.00 0.00 0.00 3.85
1827 1848 5.660864 TCCACCAAAAAGAAAATCTGGAGTT 59.339 36.000 0.00 0.00 0.00 3.01
1828 1849 6.156083 TCCACCAAAAAGAAAATCTGGAGTTT 59.844 34.615 0.00 0.00 0.00 2.66
1829 1850 6.823182 CCACCAAAAAGAAAATCTGGAGTTTT 59.177 34.615 0.00 0.00 0.00 2.43
1830 1851 7.336679 CCACCAAAAAGAAAATCTGGAGTTTTT 59.663 33.333 0.00 0.00 31.74 1.94
1831 1852 8.390354 CACCAAAAAGAAAATCTGGAGTTTTTC 58.610 33.333 12.22 12.22 40.95 2.29
1832 1853 7.552687 ACCAAAAAGAAAATCTGGAGTTTTTCC 59.447 33.333 14.93 0.00 46.98 3.13
1833 1854 7.012327 CCAAAAAGAAAATCTGGAGTTTTTCCC 59.988 37.037 14.93 0.00 46.19 3.97
1834 1855 6.806668 AAAGAAAATCTGGAGTTTTTCCCA 57.193 33.333 14.93 0.00 46.19 4.37
1835 1856 7.379059 AAAGAAAATCTGGAGTTTTTCCCAT 57.621 32.000 14.93 4.59 46.19 4.00
1836 1857 8.491045 AAAGAAAATCTGGAGTTTTTCCCATA 57.509 30.769 14.93 0.00 46.19 2.74
1837 1858 7.468141 AGAAAATCTGGAGTTTTTCCCATAC 57.532 36.000 14.93 0.00 46.19 2.39
1838 1859 7.241628 AGAAAATCTGGAGTTTTTCCCATACT 58.758 34.615 14.93 0.00 46.19 2.12
1839 1860 8.390921 AGAAAATCTGGAGTTTTTCCCATACTA 58.609 33.333 14.93 0.00 46.19 1.82
1840 1861 9.190317 GAAAATCTGGAGTTTTTCCCATACTAT 57.810 33.333 10.12 0.00 46.19 2.12
1841 1862 9.547279 AAAATCTGGAGTTTTTCCCATACTATT 57.453 29.630 0.00 0.00 46.19 1.73
1843 1864 9.628500 AATCTGGAGTTTTTCCCATACTATTAC 57.372 33.333 0.00 0.00 46.19 1.89
1844 1865 8.153221 TCTGGAGTTTTTCCCATACTATTACA 57.847 34.615 0.00 0.00 46.19 2.41
1845 1866 8.607713 TCTGGAGTTTTTCCCATACTATTACAA 58.392 33.333 0.00 0.00 46.19 2.41
1846 1867 8.570068 TGGAGTTTTTCCCATACTATTACAAC 57.430 34.615 0.00 0.00 46.19 3.32
1847 1868 7.612633 TGGAGTTTTTCCCATACTATTACAACC 59.387 37.037 0.00 0.00 46.19 3.77
1848 1869 7.067859 GGAGTTTTTCCCATACTATTACAACCC 59.932 40.741 0.00 0.00 40.37 4.11
1849 1870 7.471890 AGTTTTTCCCATACTATTACAACCCA 58.528 34.615 0.00 0.00 0.00 4.51
1850 1871 7.951245 AGTTTTTCCCATACTATTACAACCCAA 59.049 33.333 0.00 0.00 0.00 4.12
1851 1872 7.948034 TTTTCCCATACTATTACAACCCAAG 57.052 36.000 0.00 0.00 0.00 3.61
1852 1873 6.645884 TTCCCATACTATTACAACCCAAGT 57.354 37.500 0.00 0.00 0.00 3.16
1853 1874 5.996644 TCCCATACTATTACAACCCAAGTG 58.003 41.667 0.00 0.00 0.00 3.16
1854 1875 4.578928 CCCATACTATTACAACCCAAGTGC 59.421 45.833 0.00 0.00 0.00 4.40
1855 1876 5.189928 CCATACTATTACAACCCAAGTGCA 58.810 41.667 0.00 0.00 0.00 4.57
1856 1877 5.650266 CCATACTATTACAACCCAAGTGCAA 59.350 40.000 0.00 0.00 0.00 4.08
1857 1878 6.404293 CCATACTATTACAACCCAAGTGCAAC 60.404 42.308 0.00 0.00 0.00 4.17
1858 1879 4.465886 ACTATTACAACCCAAGTGCAACA 58.534 39.130 0.00 0.00 41.43 3.33
1859 1880 3.726291 ATTACAACCCAAGTGCAACAC 57.274 42.857 0.00 0.00 41.43 3.32
1869 1890 1.826385 AGTGCAACACTTAGGGCATC 58.174 50.000 0.00 0.00 42.59 3.91
1870 1891 1.352352 AGTGCAACACTTAGGGCATCT 59.648 47.619 0.00 0.00 42.59 2.90
1871 1892 1.740025 GTGCAACACTTAGGGCATCTC 59.260 52.381 0.00 0.00 38.68 2.75
1872 1893 1.630369 TGCAACACTTAGGGCATCTCT 59.370 47.619 0.00 0.00 0.00 3.10
1873 1894 2.837591 TGCAACACTTAGGGCATCTCTA 59.162 45.455 0.00 0.00 0.00 2.43
1874 1895 3.118629 TGCAACACTTAGGGCATCTCTAG 60.119 47.826 0.00 0.00 0.00 2.43
1875 1896 3.462021 CAACACTTAGGGCATCTCTAGC 58.538 50.000 0.00 0.00 0.00 3.42
1876 1897 2.752030 ACACTTAGGGCATCTCTAGCA 58.248 47.619 0.00 0.00 0.00 3.49
1877 1898 2.697751 ACACTTAGGGCATCTCTAGCAG 59.302 50.000 0.00 0.00 0.00 4.24
1878 1899 2.961741 CACTTAGGGCATCTCTAGCAGA 59.038 50.000 0.00 0.00 34.78 4.26
1879 1900 2.962421 ACTTAGGGCATCTCTAGCAGAC 59.038 50.000 0.00 0.00 32.26 3.51
1880 1901 2.002505 TAGGGCATCTCTAGCAGACC 57.997 55.000 0.00 0.00 32.26 3.85
1881 1902 0.762461 AGGGCATCTCTAGCAGACCC 60.762 60.000 8.59 8.59 37.61 4.46
1882 1903 1.751563 GGCATCTCTAGCAGACCCC 59.248 63.158 0.00 0.00 32.26 4.95
1883 1904 1.751563 GCATCTCTAGCAGACCCCC 59.248 63.158 0.00 0.00 32.26 5.40
1884 1905 0.762461 GCATCTCTAGCAGACCCCCT 60.762 60.000 0.00 0.00 32.26 4.79
1885 1906 1.799933 CATCTCTAGCAGACCCCCTT 58.200 55.000 0.00 0.00 32.26 3.95
1886 1907 1.415659 CATCTCTAGCAGACCCCCTTG 59.584 57.143 0.00 0.00 32.26 3.61
1887 1908 0.978146 TCTCTAGCAGACCCCCTTGC 60.978 60.000 0.00 0.00 0.00 4.01
1888 1909 0.980231 CTCTAGCAGACCCCCTTGCT 60.980 60.000 4.30 4.30 40.96 3.91
1889 1910 0.338467 TCTAGCAGACCCCCTTGCTA 59.662 55.000 6.10 6.10 38.66 3.49
1890 1911 1.204146 CTAGCAGACCCCCTTGCTAA 58.796 55.000 7.50 0.00 39.07 3.09
1891 1912 1.559682 CTAGCAGACCCCCTTGCTAAA 59.440 52.381 7.50 0.00 39.07 1.85
1892 1913 1.002857 AGCAGACCCCCTTGCTAAAT 58.997 50.000 0.00 0.00 35.68 1.40
1893 1914 1.064389 AGCAGACCCCCTTGCTAAATC 60.064 52.381 0.00 0.00 35.68 2.17
1894 1915 1.064389 GCAGACCCCCTTGCTAAATCT 60.064 52.381 0.00 0.00 0.00 2.40
1895 1916 2.172717 GCAGACCCCCTTGCTAAATCTA 59.827 50.000 0.00 0.00 0.00 1.98
1896 1917 3.809905 CAGACCCCCTTGCTAAATCTAC 58.190 50.000 0.00 0.00 0.00 2.59
1897 1918 3.456277 CAGACCCCCTTGCTAAATCTACT 59.544 47.826 0.00 0.00 0.00 2.57
1898 1919 4.654262 CAGACCCCCTTGCTAAATCTACTA 59.346 45.833 0.00 0.00 0.00 1.82
1899 1920 5.130477 CAGACCCCCTTGCTAAATCTACTAA 59.870 44.000 0.00 0.00 0.00 2.24
1900 1921 5.729718 AGACCCCCTTGCTAAATCTACTAAA 59.270 40.000 0.00 0.00 0.00 1.85
1901 1922 6.216868 AGACCCCCTTGCTAAATCTACTAAAA 59.783 38.462 0.00 0.00 0.00 1.52
1902 1923 6.424032 ACCCCCTTGCTAAATCTACTAAAAG 58.576 40.000 0.00 0.00 0.00 2.27
1903 1924 6.011893 ACCCCCTTGCTAAATCTACTAAAAGT 60.012 38.462 0.00 0.00 0.00 2.66
1904 1925 6.318900 CCCCCTTGCTAAATCTACTAAAAGTG 59.681 42.308 0.00 0.00 0.00 3.16
1905 1926 6.183360 CCCCTTGCTAAATCTACTAAAAGTGC 60.183 42.308 0.00 0.00 0.00 4.40
1906 1927 6.599638 CCCTTGCTAAATCTACTAAAAGTGCT 59.400 38.462 0.00 0.00 0.00 4.40
1907 1928 7.201652 CCCTTGCTAAATCTACTAAAAGTGCTC 60.202 40.741 0.00 0.00 0.00 4.26
1908 1929 7.201652 CCTTGCTAAATCTACTAAAAGTGCTCC 60.202 40.741 0.00 0.00 0.00 4.70
1909 1930 5.810587 TGCTAAATCTACTAAAAGTGCTCCG 59.189 40.000 0.00 0.00 0.00 4.63
1910 1931 5.811100 GCTAAATCTACTAAAAGTGCTCCGT 59.189 40.000 0.00 0.00 0.00 4.69
1911 1932 6.976925 GCTAAATCTACTAAAAGTGCTCCGTA 59.023 38.462 0.00 0.00 0.00 4.02
1912 1933 7.652507 GCTAAATCTACTAAAAGTGCTCCGTAT 59.347 37.037 0.00 0.00 0.00 3.06
1913 1934 9.182933 CTAAATCTACTAAAAGTGCTCCGTATC 57.817 37.037 0.00 0.00 0.00 2.24
1914 1935 5.511234 TCTACTAAAAGTGCTCCGTATCC 57.489 43.478 0.00 0.00 0.00 2.59
1915 1936 3.538634 ACTAAAAGTGCTCCGTATCCC 57.461 47.619 0.00 0.00 0.00 3.85
1916 1937 2.835764 ACTAAAAGTGCTCCGTATCCCA 59.164 45.455 0.00 0.00 0.00 4.37
1917 1938 2.109425 AAAAGTGCTCCGTATCCCAC 57.891 50.000 0.00 0.00 0.00 4.61
1918 1939 1.276622 AAAGTGCTCCGTATCCCACT 58.723 50.000 0.00 0.00 40.02 4.00
1919 1940 1.276622 AAGTGCTCCGTATCCCACTT 58.723 50.000 0.00 0.00 42.03 3.16
1920 1941 1.276622 AGTGCTCCGTATCCCACTTT 58.723 50.000 0.00 0.00 35.14 2.66
1921 1942 2.463752 AGTGCTCCGTATCCCACTTTA 58.536 47.619 0.00 0.00 35.14 1.85
1922 1943 2.167900 AGTGCTCCGTATCCCACTTTAC 59.832 50.000 0.00 0.00 35.14 2.01
1923 1944 1.483415 TGCTCCGTATCCCACTTTACC 59.517 52.381 0.00 0.00 0.00 2.85
1924 1945 1.483415 GCTCCGTATCCCACTTTACCA 59.517 52.381 0.00 0.00 0.00 3.25
1925 1946 2.104281 GCTCCGTATCCCACTTTACCAT 59.896 50.000 0.00 0.00 0.00 3.55
1926 1947 3.433173 GCTCCGTATCCCACTTTACCATT 60.433 47.826 0.00 0.00 0.00 3.16
1927 1948 4.777463 CTCCGTATCCCACTTTACCATTT 58.223 43.478 0.00 0.00 0.00 2.32
1928 1949 5.182169 TCCGTATCCCACTTTACCATTTT 57.818 39.130 0.00 0.00 0.00 1.82
1929 1950 5.572252 TCCGTATCCCACTTTACCATTTTT 58.428 37.500 0.00 0.00 0.00 1.94
1954 1975 7.333528 TGTATGAAAATCACTATTTCCCAGC 57.666 36.000 0.00 0.00 36.23 4.85
1955 1976 7.118723 TGTATGAAAATCACTATTTCCCAGCT 58.881 34.615 0.00 0.00 36.23 4.24
1956 1977 8.271458 TGTATGAAAATCACTATTTCCCAGCTA 58.729 33.333 0.00 0.00 36.23 3.32
1957 1978 7.814264 ATGAAAATCACTATTTCCCAGCTAG 57.186 36.000 0.00 0.00 36.23 3.42
1958 1979 5.590259 TGAAAATCACTATTTCCCAGCTAGC 59.410 40.000 6.62 6.62 36.23 3.42
1959 1980 4.778213 AATCACTATTTCCCAGCTAGCA 57.222 40.909 18.83 0.00 0.00 3.49
1960 1981 3.827008 TCACTATTTCCCAGCTAGCAG 57.173 47.619 18.83 9.15 0.00 4.24
1961 1982 3.374764 TCACTATTTCCCAGCTAGCAGA 58.625 45.455 18.83 7.79 0.00 4.26
1962 1983 3.969976 TCACTATTTCCCAGCTAGCAGAT 59.030 43.478 18.83 0.76 0.00 2.90
1963 1984 4.039730 TCACTATTTCCCAGCTAGCAGATC 59.960 45.833 18.83 0.00 0.00 2.75
1964 1985 2.947127 ATTTCCCAGCTAGCAGATCC 57.053 50.000 18.83 0.00 0.00 3.36
1965 1986 0.839946 TTTCCCAGCTAGCAGATCCC 59.160 55.000 18.83 0.00 0.00 3.85
1966 1987 0.326522 TTCCCAGCTAGCAGATCCCA 60.327 55.000 18.83 0.00 0.00 4.37
1967 1988 0.104777 TCCCAGCTAGCAGATCCCAT 60.105 55.000 18.83 0.00 0.00 4.00
1968 1989 1.149923 TCCCAGCTAGCAGATCCCATA 59.850 52.381 18.83 0.00 0.00 2.74
1969 1990 2.194859 CCCAGCTAGCAGATCCCATAT 58.805 52.381 18.83 0.00 0.00 1.78
1970 1991 2.170187 CCCAGCTAGCAGATCCCATATC 59.830 54.545 18.83 0.00 0.00 1.63
1971 1992 2.170187 CCAGCTAGCAGATCCCATATCC 59.830 54.545 18.83 0.00 0.00 2.59
1972 1993 3.106054 CAGCTAGCAGATCCCATATCCT 58.894 50.000 18.83 0.00 0.00 3.24
1973 1994 4.285020 CAGCTAGCAGATCCCATATCCTA 58.715 47.826 18.83 0.00 0.00 2.94
1974 1995 4.900652 CAGCTAGCAGATCCCATATCCTAT 59.099 45.833 18.83 0.00 0.00 2.57
1975 1996 6.073981 CAGCTAGCAGATCCCATATCCTATA 58.926 44.000 18.83 0.00 0.00 1.31
1976 1997 6.552725 CAGCTAGCAGATCCCATATCCTATAA 59.447 42.308 18.83 0.00 0.00 0.98
1977 1998 7.070447 CAGCTAGCAGATCCCATATCCTATAAA 59.930 40.741 18.83 0.00 0.00 1.40
1978 1999 7.793709 AGCTAGCAGATCCCATATCCTATAAAT 59.206 37.037 18.83 0.00 0.00 1.40
1979 2000 8.435982 GCTAGCAGATCCCATATCCTATAAATT 58.564 37.037 10.63 0.00 0.00 1.82
1982 2003 9.471702 AGCAGATCCCATATCCTATAAATTTTG 57.528 33.333 0.00 0.00 0.00 2.44
1983 2004 9.247861 GCAGATCCCATATCCTATAAATTTTGT 57.752 33.333 0.00 0.00 0.00 2.83
1988 2009 9.928618 TCCCATATCCTATAAATTTTGTTCACA 57.071 29.630 0.00 0.00 0.00 3.58
2006 2027 8.746922 TGTTCACAAATCTTGAAATCTATTGC 57.253 30.769 0.00 0.00 34.78 3.56
2007 2028 8.579006 TGTTCACAAATCTTGAAATCTATTGCT 58.421 29.630 0.00 0.00 34.78 3.91
2008 2029 9.070149 GTTCACAAATCTTGAAATCTATTGCTC 57.930 33.333 0.00 0.00 34.78 4.26
2009 2030 8.339344 TCACAAATCTTGAAATCTATTGCTCA 57.661 30.769 0.00 0.00 0.00 4.26
2010 2031 8.795513 TCACAAATCTTGAAATCTATTGCTCAA 58.204 29.630 0.00 0.00 0.00 3.02
2011 2032 9.414295 CACAAATCTTGAAATCTATTGCTCAAA 57.586 29.630 0.00 0.00 0.00 2.69
2028 2049 9.932207 ATTGCTCAAATCATTCTAACAAATTGA 57.068 25.926 0.00 0.00 0.00 2.57
2029 2050 8.746922 TGCTCAAATCATTCTAACAAATTGAC 57.253 30.769 0.00 0.00 0.00 3.18
2030 2051 7.814107 TGCTCAAATCATTCTAACAAATTGACC 59.186 33.333 0.00 0.00 0.00 4.02
2031 2052 8.031277 GCTCAAATCATTCTAACAAATTGACCT 58.969 33.333 0.00 0.00 0.00 3.85
2032 2053 9.565213 CTCAAATCATTCTAACAAATTGACCTC 57.435 33.333 0.00 0.00 0.00 3.85
2033 2054 9.076781 TCAAATCATTCTAACAAATTGACCTCA 57.923 29.630 0.00 0.00 0.00 3.86
2034 2055 9.865321 CAAATCATTCTAACAAATTGACCTCAT 57.135 29.630 0.00 0.00 0.00 2.90
2038 2059 9.076781 TCATTCTAACAAATTGACCTCATTTCA 57.923 29.630 0.00 0.00 0.00 2.69
2039 2060 9.695526 CATTCTAACAAATTGACCTCATTTCAA 57.304 29.630 0.00 0.00 37.38 2.69
2040 2061 9.696917 ATTCTAACAAATTGACCTCATTTCAAC 57.303 29.630 0.00 0.00 35.82 3.18
2041 2062 8.231692 TCTAACAAATTGACCTCATTTCAACA 57.768 30.769 0.00 0.00 35.82 3.33
2042 2063 8.134895 TCTAACAAATTGACCTCATTTCAACAC 58.865 33.333 0.00 0.00 35.82 3.32
2043 2064 6.219417 ACAAATTGACCTCATTTCAACACA 57.781 33.333 0.00 0.00 35.82 3.72
2044 2065 6.638610 ACAAATTGACCTCATTTCAACACAA 58.361 32.000 0.00 0.00 35.82 3.33
2045 2066 7.102346 ACAAATTGACCTCATTTCAACACAAA 58.898 30.769 0.00 0.00 35.82 2.83
2046 2067 7.064490 ACAAATTGACCTCATTTCAACACAAAC 59.936 33.333 0.00 0.00 35.82 2.93
2047 2068 5.651387 TTGACCTCATTTCAACACAAACA 57.349 34.783 0.00 0.00 0.00 2.83
2048 2069 5.850557 TGACCTCATTTCAACACAAACAT 57.149 34.783 0.00 0.00 0.00 2.71
2049 2070 6.951062 TGACCTCATTTCAACACAAACATA 57.049 33.333 0.00 0.00 0.00 2.29
2050 2071 6.969366 TGACCTCATTTCAACACAAACATAG 58.031 36.000 0.00 0.00 0.00 2.23
2051 2072 6.545666 TGACCTCATTTCAACACAAACATAGT 59.454 34.615 0.00 0.00 0.00 2.12
2052 2073 7.717436 TGACCTCATTTCAACACAAACATAGTA 59.283 33.333 0.00 0.00 0.00 1.82
2053 2074 8.635765 ACCTCATTTCAACACAAACATAGTAT 57.364 30.769 0.00 0.00 0.00 2.12
2054 2075 9.077885 ACCTCATTTCAACACAAACATAGTATT 57.922 29.630 0.00 0.00 0.00 1.89
2055 2076 9.912634 CCTCATTTCAACACAAACATAGTATTT 57.087 29.630 0.00 0.00 0.00 1.40
2080 2101 8.692110 TTTTTGAATGCATCATATCACACTTC 57.308 30.769 0.00 0.00 38.03 3.01
2081 2102 7.393841 TTTGAATGCATCATATCACACTTCA 57.606 32.000 0.00 0.00 38.03 3.02
2082 2103 7.393841 TTGAATGCATCATATCACACTTCAA 57.606 32.000 0.00 0.00 38.03 2.69
2083 2104 6.788243 TGAATGCATCATATCACACTTCAAC 58.212 36.000 0.00 0.00 31.50 3.18
2084 2105 6.600427 TGAATGCATCATATCACACTTCAACT 59.400 34.615 0.00 0.00 31.50 3.16
2085 2106 7.769970 TGAATGCATCATATCACACTTCAACTA 59.230 33.333 0.00 0.00 31.50 2.24
2086 2107 6.908870 TGCATCATATCACACTTCAACTAC 57.091 37.500 0.00 0.00 0.00 2.73
2087 2108 5.519927 TGCATCATATCACACTTCAACTACG 59.480 40.000 0.00 0.00 0.00 3.51
2088 2109 5.748630 GCATCATATCACACTTCAACTACGA 59.251 40.000 0.00 0.00 0.00 3.43
2089 2110 6.291849 GCATCATATCACACTTCAACTACGAC 60.292 42.308 0.00 0.00 0.00 4.34
2090 2111 5.647589 TCATATCACACTTCAACTACGACC 58.352 41.667 0.00 0.00 0.00 4.79
2091 2112 5.184287 TCATATCACACTTCAACTACGACCA 59.816 40.000 0.00 0.00 0.00 4.02
2092 2113 4.537135 ATCACACTTCAACTACGACCAT 57.463 40.909 0.00 0.00 0.00 3.55
2093 2114 5.654603 ATCACACTTCAACTACGACCATA 57.345 39.130 0.00 0.00 0.00 2.74
2094 2115 5.456548 TCACACTTCAACTACGACCATAA 57.543 39.130 0.00 0.00 0.00 1.90
2095 2116 5.845103 TCACACTTCAACTACGACCATAAA 58.155 37.500 0.00 0.00 0.00 1.40
2096 2117 6.460781 TCACACTTCAACTACGACCATAAAT 58.539 36.000 0.00 0.00 0.00 1.40
2097 2118 7.604549 TCACACTTCAACTACGACCATAAATA 58.395 34.615 0.00 0.00 0.00 1.40
2098 2119 8.255206 TCACACTTCAACTACGACCATAAATAT 58.745 33.333 0.00 0.00 0.00 1.28
2099 2120 9.524106 CACACTTCAACTACGACCATAAATATA 57.476 33.333 0.00 0.00 0.00 0.86
2100 2121 9.745880 ACACTTCAACTACGACCATAAATATAG 57.254 33.333 0.00 0.00 0.00 1.31
2101 2122 9.745880 CACTTCAACTACGACCATAAATATAGT 57.254 33.333 0.00 0.00 0.00 2.12
2105 2126 9.740239 TCAACTACGACCATAAATATAGTTGAC 57.260 33.333 16.65 0.00 46.71 3.18
2106 2127 8.975439 CAACTACGACCATAAATATAGTTGACC 58.025 37.037 13.99 0.00 46.42 4.02
2107 2128 8.241497 ACTACGACCATAAATATAGTTGACCA 57.759 34.615 0.00 0.00 0.00 4.02
2108 2129 8.698210 ACTACGACCATAAATATAGTTGACCAA 58.302 33.333 0.00 0.00 0.00 3.67
2109 2130 9.537192 CTACGACCATAAATATAGTTGACCAAA 57.463 33.333 0.00 0.00 0.00 3.28
2110 2131 8.974060 ACGACCATAAATATAGTTGACCAAAT 57.026 30.769 0.00 0.00 0.00 2.32
2111 2132 9.052759 ACGACCATAAATATAGTTGACCAAATC 57.947 33.333 0.00 0.00 0.00 2.17
2112 2133 9.273016 CGACCATAAATATAGTTGACCAAATCT 57.727 33.333 0.00 0.00 0.00 2.40
2123 2144 9.770097 ATAGTTGACCAAATCTATCACACATAG 57.230 33.333 0.00 0.00 0.00 2.23
2124 2145 6.540189 AGTTGACCAAATCTATCACACATAGC 59.460 38.462 0.00 0.00 0.00 2.97
2125 2146 5.368145 TGACCAAATCTATCACACATAGCC 58.632 41.667 0.00 0.00 0.00 3.93
2126 2147 5.104569 TGACCAAATCTATCACACATAGCCA 60.105 40.000 0.00 0.00 0.00 4.75
2127 2148 5.126067 ACCAAATCTATCACACATAGCCAC 58.874 41.667 0.00 0.00 0.00 5.01
2128 2149 5.125356 CCAAATCTATCACACATAGCCACA 58.875 41.667 0.00 0.00 0.00 4.17
2129 2150 5.589855 CCAAATCTATCACACATAGCCACAA 59.410 40.000 0.00 0.00 0.00 3.33
2130 2151 6.458751 CCAAATCTATCACACATAGCCACAAC 60.459 42.308 0.00 0.00 0.00 3.32
2131 2152 5.620738 ATCTATCACACATAGCCACAACT 57.379 39.130 0.00 0.00 0.00 3.16
2132 2153 5.420725 TCTATCACACATAGCCACAACTT 57.579 39.130 0.00 0.00 0.00 2.66
2133 2154 5.804639 TCTATCACACATAGCCACAACTTT 58.195 37.500 0.00 0.00 0.00 2.66
2134 2155 6.237901 TCTATCACACATAGCCACAACTTTT 58.762 36.000 0.00 0.00 0.00 2.27
2135 2156 4.566545 TCACACATAGCCACAACTTTTG 57.433 40.909 0.00 0.00 0.00 2.44
2136 2157 3.052036 CACACATAGCCACAACTTTTGC 58.948 45.455 0.00 0.00 0.00 3.68
2137 2158 2.035832 ACACATAGCCACAACTTTTGCC 59.964 45.455 0.00 0.00 0.00 4.52
2138 2159 2.035704 CACATAGCCACAACTTTTGCCA 59.964 45.455 0.00 0.00 0.00 4.92
2139 2160 2.697751 ACATAGCCACAACTTTTGCCAA 59.302 40.909 0.00 0.00 0.00 4.52
2140 2161 3.133721 ACATAGCCACAACTTTTGCCAAA 59.866 39.130 0.00 0.00 0.00 3.28
2141 2162 2.777832 AGCCACAACTTTTGCCAAAA 57.222 40.000 2.15 2.15 0.00 2.44
2151 2172 4.635833 CTTTTGCCAAAAGGCACAAAAT 57.364 36.364 19.87 0.00 45.06 1.82
2152 2173 4.352887 CTTTTGCCAAAAGGCACAAAATG 58.647 39.130 19.87 0.41 45.06 2.32
2153 2174 2.996249 TGCCAAAAGGCACAAAATGA 57.004 40.000 4.86 0.00 40.19 2.57
2154 2175 2.836262 TGCCAAAAGGCACAAAATGAG 58.164 42.857 4.86 0.00 40.19 2.90
2155 2176 1.532437 GCCAAAAGGCACAAAATGAGC 59.468 47.619 0.84 0.00 33.11 4.26
2156 2177 2.836262 CCAAAAGGCACAAAATGAGCA 58.164 42.857 2.41 0.00 35.63 4.26
2157 2178 3.204526 CCAAAAGGCACAAAATGAGCAA 58.795 40.909 2.41 0.00 35.63 3.91
2158 2179 3.249080 CCAAAAGGCACAAAATGAGCAAG 59.751 43.478 2.41 0.00 35.63 4.01
2159 2180 3.825143 AAAGGCACAAAATGAGCAAGT 57.175 38.095 2.41 0.00 35.63 3.16
2160 2181 3.825143 AAGGCACAAAATGAGCAAGTT 57.175 38.095 2.41 0.00 35.63 2.66
2161 2182 3.375782 AGGCACAAAATGAGCAAGTTC 57.624 42.857 2.41 0.00 35.63 3.01
2162 2183 2.694628 AGGCACAAAATGAGCAAGTTCA 59.305 40.909 2.41 0.00 35.63 3.18
2163 2184 3.322828 AGGCACAAAATGAGCAAGTTCAT 59.677 39.130 2.41 0.00 39.42 2.57
2164 2185 4.060205 GGCACAAAATGAGCAAGTTCATT 58.940 39.130 6.36 6.36 46.81 2.57
2165 2186 4.151157 GGCACAAAATGAGCAAGTTCATTC 59.849 41.667 11.66 1.06 44.74 2.67
2166 2187 4.986659 GCACAAAATGAGCAAGTTCATTCT 59.013 37.500 11.66 0.00 44.74 2.40
2167 2188 6.151691 GCACAAAATGAGCAAGTTCATTCTA 58.848 36.000 11.66 0.00 44.74 2.10
2168 2189 6.642131 GCACAAAATGAGCAAGTTCATTCTAA 59.358 34.615 11.66 0.00 44.74 2.10
2169 2190 7.169645 GCACAAAATGAGCAAGTTCATTCTAAA 59.830 33.333 11.66 0.00 44.74 1.85
2170 2191 9.033481 CACAAAATGAGCAAGTTCATTCTAAAA 57.967 29.630 11.66 0.00 44.74 1.52
2171 2192 9.598517 ACAAAATGAGCAAGTTCATTCTAAAAA 57.401 25.926 11.66 0.00 44.74 1.94
2173 2194 7.880059 AATGAGCAAGTTCATTCTAAAAAGC 57.120 32.000 6.36 0.00 42.57 3.51
2174 2195 5.772521 TGAGCAAGTTCATTCTAAAAAGCC 58.227 37.500 0.00 0.00 0.00 4.35
2175 2196 5.301551 TGAGCAAGTTCATTCTAAAAAGCCA 59.698 36.000 0.00 0.00 0.00 4.75
2176 2197 5.532557 AGCAAGTTCATTCTAAAAAGCCAC 58.467 37.500 0.00 0.00 0.00 5.01
2177 2198 4.686091 GCAAGTTCATTCTAAAAAGCCACC 59.314 41.667 0.00 0.00 0.00 4.61
2178 2199 5.738783 GCAAGTTCATTCTAAAAAGCCACCA 60.739 40.000 0.00 0.00 0.00 4.17
2179 2200 6.279882 CAAGTTCATTCTAAAAAGCCACCAA 58.720 36.000 0.00 0.00 0.00 3.67
2180 2201 6.089249 AGTTCATTCTAAAAAGCCACCAAG 57.911 37.500 0.00 0.00 0.00 3.61
2181 2202 5.833131 AGTTCATTCTAAAAAGCCACCAAGA 59.167 36.000 0.00 0.00 0.00 3.02
2182 2203 5.705609 TCATTCTAAAAAGCCACCAAGAC 57.294 39.130 0.00 0.00 0.00 3.01
2183 2204 5.136828 TCATTCTAAAAAGCCACCAAGACA 58.863 37.500 0.00 0.00 0.00 3.41
2184 2205 4.911514 TTCTAAAAAGCCACCAAGACAC 57.088 40.909 0.00 0.00 0.00 3.67
2185 2206 2.875933 TCTAAAAAGCCACCAAGACACG 59.124 45.455 0.00 0.00 0.00 4.49
2186 2207 0.744281 AAAAAGCCACCAAGACACGG 59.256 50.000 0.00 0.00 0.00 4.94
2187 2208 0.395173 AAAAGCCACCAAGACACGGT 60.395 50.000 0.00 0.00 37.16 4.83
2195 2216 3.478857 ACCAAGACACGGTGTATCAAA 57.521 42.857 14.74 0.00 34.69 2.69
2196 2217 4.015872 ACCAAGACACGGTGTATCAAAT 57.984 40.909 14.74 0.00 34.69 2.32
2197 2218 3.751175 ACCAAGACACGGTGTATCAAATG 59.249 43.478 14.74 6.07 34.69 2.32
2198 2219 3.426159 CCAAGACACGGTGTATCAAATGC 60.426 47.826 14.74 0.00 0.00 3.56
2199 2220 2.356135 AGACACGGTGTATCAAATGCC 58.644 47.619 14.74 0.00 0.00 4.40
2200 2221 2.080693 GACACGGTGTATCAAATGCCA 58.919 47.619 14.74 0.00 0.00 4.92
2201 2222 1.810151 ACACGGTGTATCAAATGCCAC 59.190 47.619 12.96 0.00 0.00 5.01
2202 2223 1.132262 CACGGTGTATCAAATGCCACC 59.868 52.381 0.00 0.00 43.13 4.61
2203 2224 1.271652 ACGGTGTATCAAATGCCACCA 60.272 47.619 8.25 0.00 46.13 4.17
2204 2225 2.023673 CGGTGTATCAAATGCCACCAT 58.976 47.619 8.25 0.00 46.13 3.55
2205 2226 3.210227 CGGTGTATCAAATGCCACCATA 58.790 45.455 8.25 0.00 46.13 2.74
2206 2227 3.250762 CGGTGTATCAAATGCCACCATAG 59.749 47.826 8.25 0.00 46.13 2.23
2207 2228 4.207165 GGTGTATCAAATGCCACCATAGT 58.793 43.478 0.00 0.00 45.34 2.12
2208 2229 4.644685 GGTGTATCAAATGCCACCATAGTT 59.355 41.667 0.00 0.00 45.34 2.24
2209 2230 5.221048 GGTGTATCAAATGCCACCATAGTTC 60.221 44.000 0.00 0.00 45.34 3.01
2210 2231 5.356751 GTGTATCAAATGCCACCATAGTTCA 59.643 40.000 0.00 0.00 0.00 3.18
2211 2232 5.948758 TGTATCAAATGCCACCATAGTTCAA 59.051 36.000 0.00 0.00 0.00 2.69
2212 2233 5.999205 ATCAAATGCCACCATAGTTCAAA 57.001 34.783 0.00 0.00 0.00 2.69
2213 2234 5.999205 TCAAATGCCACCATAGTTCAAAT 57.001 34.783 0.00 0.00 0.00 2.32
2214 2235 7.658525 ATCAAATGCCACCATAGTTCAAATA 57.341 32.000 0.00 0.00 0.00 1.40
2215 2236 7.099266 TCAAATGCCACCATAGTTCAAATAG 57.901 36.000 0.00 0.00 0.00 1.73
2216 2237 6.096705 TCAAATGCCACCATAGTTCAAATAGG 59.903 38.462 0.00 0.00 0.00 2.57
2217 2238 3.287222 TGCCACCATAGTTCAAATAGGC 58.713 45.455 0.00 0.00 39.95 3.93
2218 2239 3.053693 TGCCACCATAGTTCAAATAGGCT 60.054 43.478 0.00 0.00 40.18 4.58
2219 2240 3.565902 GCCACCATAGTTCAAATAGGCTC 59.434 47.826 0.00 0.00 36.72 4.70
2220 2241 4.780815 CCACCATAGTTCAAATAGGCTCA 58.219 43.478 0.00 0.00 0.00 4.26
2221 2242 5.380043 CCACCATAGTTCAAATAGGCTCAT 58.620 41.667 0.00 0.00 0.00 2.90
2222 2243 5.240183 CCACCATAGTTCAAATAGGCTCATG 59.760 44.000 0.00 0.00 0.00 3.07
2223 2244 6.057533 CACCATAGTTCAAATAGGCTCATGA 58.942 40.000 0.00 0.00 0.00 3.07
2224 2245 6.543465 CACCATAGTTCAAATAGGCTCATGAA 59.457 38.462 0.00 0.00 0.00 2.57
2228 2249 4.986622 GTTCAAATAGGCTCATGAACCAC 58.013 43.478 17.32 1.20 43.56 4.16
2229 2250 3.620488 TCAAATAGGCTCATGAACCACC 58.380 45.455 17.32 6.76 0.00 4.61
2230 2251 2.332063 AATAGGCTCATGAACCACCG 57.668 50.000 17.32 0.00 0.00 4.94
2231 2252 0.179045 ATAGGCTCATGAACCACCGC 60.179 55.000 17.32 5.89 0.00 5.68
2232 2253 2.252072 TAGGCTCATGAACCACCGCC 62.252 60.000 17.32 14.68 37.80 6.13
2233 2254 2.045926 GCTCATGAACCACCGCCT 60.046 61.111 0.00 0.00 0.00 5.52
2234 2255 1.675641 GCTCATGAACCACCGCCTT 60.676 57.895 0.00 0.00 0.00 4.35
2235 2256 1.244019 GCTCATGAACCACCGCCTTT 61.244 55.000 0.00 0.00 0.00 3.11
2236 2257 0.523072 CTCATGAACCACCGCCTTTG 59.477 55.000 0.00 0.00 0.00 2.77
2237 2258 1.080569 CATGAACCACCGCCTTTGC 60.081 57.895 0.00 0.00 0.00 3.68
2238 2259 2.275380 ATGAACCACCGCCTTTGCC 61.275 57.895 0.00 0.00 0.00 4.52
2239 2260 2.909965 GAACCACCGCCTTTGCCA 60.910 61.111 0.00 0.00 0.00 4.92
2240 2261 2.203625 AACCACCGCCTTTGCCAT 60.204 55.556 0.00 0.00 0.00 4.40
2241 2262 2.212900 GAACCACCGCCTTTGCCATC 62.213 60.000 0.00 0.00 0.00 3.51
2242 2263 2.361610 CCACCGCCTTTGCCATCT 60.362 61.111 0.00 0.00 0.00 2.90
2243 2264 2.703798 CCACCGCCTTTGCCATCTG 61.704 63.158 0.00 0.00 0.00 2.90
2244 2265 3.064324 ACCGCCTTTGCCATCTGC 61.064 61.111 0.00 0.00 41.77 4.26
2253 2274 2.034687 GCCATCTGCACCACCACT 59.965 61.111 0.00 0.00 40.77 4.00
2254 2275 2.338015 GCCATCTGCACCACCACTG 61.338 63.158 0.00 0.00 40.77 3.66
2255 2276 2.338015 CCATCTGCACCACCACTGC 61.338 63.158 0.00 0.00 35.03 4.40
2256 2277 2.034687 ATCTGCACCACCACTGCC 59.965 61.111 0.00 0.00 33.36 4.85
2257 2278 2.532532 ATCTGCACCACCACTGCCT 61.533 57.895 0.00 0.00 33.36 4.75
2258 2279 2.759641 ATCTGCACCACCACTGCCTG 62.760 60.000 0.00 0.00 33.36 4.85
2261 2282 3.289834 CACCACCACTGCCTGCAC 61.290 66.667 0.00 0.00 0.00 4.57
2262 2283 4.586235 ACCACCACTGCCTGCACC 62.586 66.667 0.00 0.00 0.00 5.01
2263 2284 4.584518 CCACCACTGCCTGCACCA 62.585 66.667 0.00 0.00 0.00 4.17
2264 2285 2.282674 CACCACTGCCTGCACCAT 60.283 61.111 0.00 0.00 0.00 3.55
2265 2286 2.034687 ACCACTGCCTGCACCATC 59.965 61.111 0.00 0.00 0.00 3.51
2266 2287 3.129502 CCACTGCCTGCACCATCG 61.130 66.667 0.00 0.00 0.00 3.84
2267 2288 3.807538 CACTGCCTGCACCATCGC 61.808 66.667 0.00 0.00 0.00 4.58
2272 2293 4.720902 CCTGCACCATCGCCACCA 62.721 66.667 0.00 0.00 0.00 4.17
2273 2294 2.672651 CTGCACCATCGCCACCAA 60.673 61.111 0.00 0.00 0.00 3.67
2274 2295 2.203408 TGCACCATCGCCACCAAA 60.203 55.556 0.00 0.00 0.00 3.28
2275 2296 2.258286 GCACCATCGCCACCAAAC 59.742 61.111 0.00 0.00 0.00 2.93
2276 2297 2.560119 GCACCATCGCCACCAAACA 61.560 57.895 0.00 0.00 0.00 2.83
2277 2298 1.876497 GCACCATCGCCACCAAACAT 61.876 55.000 0.00 0.00 0.00 2.71
2278 2299 0.171007 CACCATCGCCACCAAACATC 59.829 55.000 0.00 0.00 0.00 3.06
2279 2300 0.038166 ACCATCGCCACCAAACATCT 59.962 50.000 0.00 0.00 0.00 2.90
2280 2301 1.176527 CCATCGCCACCAAACATCTT 58.823 50.000 0.00 0.00 0.00 2.40
2281 2302 2.290641 ACCATCGCCACCAAACATCTTA 60.291 45.455 0.00 0.00 0.00 2.10
2282 2303 2.355756 CCATCGCCACCAAACATCTTAG 59.644 50.000 0.00 0.00 0.00 2.18
2283 2304 1.448985 TCGCCACCAAACATCTTAGC 58.551 50.000 0.00 0.00 0.00 3.09
2284 2305 0.451783 CGCCACCAAACATCTTAGCC 59.548 55.000 0.00 0.00 0.00 3.93
2285 2306 1.544724 GCCACCAAACATCTTAGCCA 58.455 50.000 0.00 0.00 0.00 4.75
2286 2307 2.102578 GCCACCAAACATCTTAGCCAT 58.897 47.619 0.00 0.00 0.00 4.40
2287 2308 2.159198 GCCACCAAACATCTTAGCCATG 60.159 50.000 0.00 0.00 0.00 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
221 229 1.482593 CTGGGCTTCTAATGACCGTCT 59.517 52.381 0.00 0.00 0.00 4.18
234 242 4.505039 CCAAGTACAAGAACTACTGGGCTT 60.505 45.833 0.00 0.00 30.04 4.35
479 488 0.613853 TTCTTCCTCGGATGGTCGGT 60.614 55.000 0.00 0.00 0.00 4.69
527 536 2.281761 CAGCTCCAACGCCAACCT 60.282 61.111 0.00 0.00 0.00 3.50
556 565 0.482887 TCCTCCTCTCCATCGCCATA 59.517 55.000 0.00 0.00 0.00 2.74
616 628 5.013183 GCCTATATTTACTCACCCTGACCAT 59.987 44.000 0.00 0.00 0.00 3.55
643 655 5.306678 ACTGTCACTCTTCCTTCTCTTCATT 59.693 40.000 0.00 0.00 0.00 2.57
647 659 4.219115 TGACTGTCACTCTTCCTTCTCTT 58.781 43.478 6.36 0.00 0.00 2.85
652 667 2.369860 TGCATGACTGTCACTCTTCCTT 59.630 45.455 13.50 0.00 0.00 3.36
673 688 3.554934 TGAAGAGCATGTGGTCAAAACT 58.445 40.909 13.92 0.00 44.42 2.66
679 694 3.065925 GGCTTATTGAAGAGCATGTGGTC 59.934 47.826 4.11 4.11 40.63 4.02
723 738 1.814394 TCTGCACACAATTCATGGAGC 59.186 47.619 0.00 0.00 32.32 4.70
804 819 1.662044 GGCATTGGATGAATCGGCC 59.338 57.895 0.00 0.00 0.00 6.13
809 824 2.112998 CACCTTGGGCATTGGATGAAT 58.887 47.619 0.00 0.00 0.00 2.57
908 924 1.959226 CCGTAGTTGTGGCGCTTGT 60.959 57.895 7.64 0.00 0.00 3.16
969 985 2.151202 TCAAGTTTCGGTGCAAGGATC 58.849 47.619 0.00 0.00 0.00 3.36
1117 1134 0.849094 TAGGTGGCCCAACCCTGATT 60.849 55.000 8.63 0.00 41.54 2.57
1138 1155 2.492088 TCTTGATCTGATGAACGACGGT 59.508 45.455 0.00 0.00 0.00 4.83
1252 1269 2.048127 GGCTTCGTCGTGCTTCCT 60.048 61.111 11.32 0.00 0.00 3.36
1290 1307 0.118346 TTAGGAAGGAGGTGCCCTGA 59.882 55.000 0.00 0.00 36.49 3.86
1292 1309 0.119358 ACTTAGGAAGGAGGTGCCCT 59.881 55.000 0.00 0.00 38.42 5.19
1425 1442 2.353889 CCACACATCATAAGCAGAGCAC 59.646 50.000 0.00 0.00 0.00 4.40
1488 1505 3.392947 TGGTGTGTGATAACCTCTTTGGA 59.607 43.478 0.00 0.00 39.71 3.53
1514 1531 4.567971 CATGGTGTTTGGTTGTATGCAAT 58.432 39.130 0.00 0.00 36.92 3.56
1541 1559 3.222173 TGCATGTTAGTGGACAAACCT 57.778 42.857 0.00 0.00 39.86 3.50
1602 1622 3.884704 TTGCCCGCATGCCCTCTTT 62.885 57.895 13.15 0.00 0.00 2.52
1615 1635 2.614983 TCTACAAGTTGTTTCGTTGCCC 59.385 45.455 14.90 0.00 0.00 5.36
1622 1642 4.829064 TGCACCATCTACAAGTTGTTTC 57.171 40.909 14.90 0.00 0.00 2.78
1633 1653 2.646930 CAGCCTCAAATGCACCATCTA 58.353 47.619 0.00 0.00 0.00 1.98
1698 1718 0.531200 GGTTGCCGTAGTCTACAGCT 59.469 55.000 17.12 0.00 33.36 4.24
1699 1719 0.245539 TGGTTGCCGTAGTCTACAGC 59.754 55.000 10.75 10.75 32.81 4.40
1733 1754 1.453155 GCGAATTCAGCTTCCTGGAA 58.547 50.000 9.14 9.14 39.61 3.53
1734 1755 0.740868 CGCGAATTCAGCTTCCTGGA 60.741 55.000 0.00 0.00 39.61 3.86
1735 1756 0.740868 TCGCGAATTCAGCTTCCTGG 60.741 55.000 6.20 0.00 39.61 4.45
1736 1757 1.061711 CTTCGCGAATTCAGCTTCCTG 59.938 52.381 23.67 1.66 40.54 3.86
1737 1758 1.363744 CTTCGCGAATTCAGCTTCCT 58.636 50.000 23.67 0.00 0.00 3.36
1738 1759 0.247854 GCTTCGCGAATTCAGCTTCC 60.248 55.000 23.67 0.00 0.00 3.46
1739 1760 0.723981 AGCTTCGCGAATTCAGCTTC 59.276 50.000 23.63 6.76 39.69 3.86
1740 1761 0.445436 CAGCTTCGCGAATTCAGCTT 59.555 50.000 26.01 12.02 40.75 3.74
1741 1762 0.390340 TCAGCTTCGCGAATTCAGCT 60.390 50.000 23.63 23.63 43.59 4.24
1742 1763 0.026027 CTCAGCTTCGCGAATTCAGC 59.974 55.000 23.67 21.66 0.00 4.26
1743 1764 0.026027 GCTCAGCTTCGCGAATTCAG 59.974 55.000 23.67 15.96 0.00 3.02
1744 1765 1.361668 GGCTCAGCTTCGCGAATTCA 61.362 55.000 23.67 5.90 0.00 2.57
1745 1766 1.349973 GGCTCAGCTTCGCGAATTC 59.650 57.895 23.67 16.75 0.00 2.17
1746 1767 2.456119 CGGCTCAGCTTCGCGAATT 61.456 57.895 23.67 11.14 0.00 2.17
1747 1768 2.887568 CGGCTCAGCTTCGCGAAT 60.888 61.111 23.67 5.40 0.00 3.34
1748 1769 4.050934 TCGGCTCAGCTTCGCGAA 62.051 61.111 22.01 22.01 0.00 4.70
1749 1770 4.778415 GTCGGCTCAGCTTCGCGA 62.778 66.667 3.71 3.71 0.00 5.87
1750 1771 2.867333 TTAGTCGGCTCAGCTTCGCG 62.867 60.000 0.00 0.00 0.00 5.87
1751 1772 0.528684 ATTAGTCGGCTCAGCTTCGC 60.529 55.000 0.00 0.00 0.00 4.70
1752 1773 2.033550 ACTATTAGTCGGCTCAGCTTCG 59.966 50.000 0.00 0.00 0.00 3.79
1753 1774 3.376540 CACTATTAGTCGGCTCAGCTTC 58.623 50.000 0.00 0.00 0.00 3.86
1754 1775 2.482142 GCACTATTAGTCGGCTCAGCTT 60.482 50.000 0.00 0.00 0.00 3.74
1755 1776 1.067821 GCACTATTAGTCGGCTCAGCT 59.932 52.381 0.00 0.00 0.00 4.24
1756 1777 1.202417 TGCACTATTAGTCGGCTCAGC 60.202 52.381 0.00 0.00 0.00 4.26
1757 1778 2.871182 TGCACTATTAGTCGGCTCAG 57.129 50.000 0.00 0.00 0.00 3.35
1758 1779 3.603158 TTTGCACTATTAGTCGGCTCA 57.397 42.857 0.00 0.00 0.00 4.26
1759 1780 4.648970 GTTTTTGCACTATTAGTCGGCTC 58.351 43.478 0.00 0.00 0.00 4.70
1760 1781 3.124636 CGTTTTTGCACTATTAGTCGGCT 59.875 43.478 0.00 0.00 0.00 5.52
1761 1782 3.123959 TCGTTTTTGCACTATTAGTCGGC 59.876 43.478 0.00 0.00 0.00 5.54
1762 1783 4.624024 TCTCGTTTTTGCACTATTAGTCGG 59.376 41.667 0.00 0.00 0.00 4.79
1763 1784 5.756950 TCTCGTTTTTGCACTATTAGTCG 57.243 39.130 0.00 0.00 0.00 4.18
1764 1785 6.016111 GCTTCTCGTTTTTGCACTATTAGTC 58.984 40.000 0.00 0.00 0.00 2.59
1765 1786 5.468746 TGCTTCTCGTTTTTGCACTATTAGT 59.531 36.000 0.00 0.00 0.00 2.24
1766 1787 5.927030 TGCTTCTCGTTTTTGCACTATTAG 58.073 37.500 0.00 0.00 0.00 1.73
1767 1788 5.933187 TGCTTCTCGTTTTTGCACTATTA 57.067 34.783 0.00 0.00 0.00 0.98
1768 1789 4.829064 TGCTTCTCGTTTTTGCACTATT 57.171 36.364 0.00 0.00 0.00 1.73
1769 1790 4.320494 CCTTGCTTCTCGTTTTTGCACTAT 60.320 41.667 0.00 0.00 33.13 2.12
1770 1791 3.003275 CCTTGCTTCTCGTTTTTGCACTA 59.997 43.478 0.00 0.00 33.13 2.74
1771 1792 2.223572 CCTTGCTTCTCGTTTTTGCACT 60.224 45.455 0.00 0.00 33.13 4.40
1772 1793 2.119457 CCTTGCTTCTCGTTTTTGCAC 58.881 47.619 0.00 0.00 33.13 4.57
1773 1794 2.020720 TCCTTGCTTCTCGTTTTTGCA 58.979 42.857 0.00 0.00 0.00 4.08
1774 1795 2.774439 TCCTTGCTTCTCGTTTTTGC 57.226 45.000 0.00 0.00 0.00 3.68
1775 1796 3.632189 CCTTCCTTGCTTCTCGTTTTTG 58.368 45.455 0.00 0.00 0.00 2.44
1776 1797 2.034685 GCCTTCCTTGCTTCTCGTTTTT 59.965 45.455 0.00 0.00 0.00 1.94
1777 1798 1.609072 GCCTTCCTTGCTTCTCGTTTT 59.391 47.619 0.00 0.00 0.00 2.43
1778 1799 1.239347 GCCTTCCTTGCTTCTCGTTT 58.761 50.000 0.00 0.00 0.00 3.60
1779 1800 0.606673 GGCCTTCCTTGCTTCTCGTT 60.607 55.000 0.00 0.00 0.00 3.85
1780 1801 1.003233 GGCCTTCCTTGCTTCTCGT 60.003 57.895 0.00 0.00 0.00 4.18
1781 1802 1.746991 GGGCCTTCCTTGCTTCTCG 60.747 63.158 0.84 0.00 0.00 4.04
1782 1803 0.679321 CAGGGCCTTCCTTGCTTCTC 60.679 60.000 1.32 0.00 45.47 2.87
1783 1804 1.381851 CAGGGCCTTCCTTGCTTCT 59.618 57.895 1.32 0.00 45.47 2.85
1784 1805 4.009015 CAGGGCCTTCCTTGCTTC 57.991 61.111 1.32 0.00 45.47 3.86
1788 1809 2.044551 GGAGCAGGGCCTTCCTTG 60.045 66.667 15.78 1.12 45.47 3.61
1789 1810 2.532715 TGGAGCAGGGCCTTCCTT 60.533 61.111 21.96 0.99 45.47 3.36
1791 1812 4.432741 GGTGGAGCAGGGCCTTCC 62.433 72.222 16.13 16.13 0.00 3.46
1792 1813 2.713531 TTTGGTGGAGCAGGGCCTTC 62.714 60.000 1.32 0.00 0.00 3.46
1793 1814 2.310930 TTTTGGTGGAGCAGGGCCTT 62.311 55.000 1.32 0.00 0.00 4.35
1794 1815 2.310930 TTTTTGGTGGAGCAGGGCCT 62.311 55.000 0.00 0.00 0.00 5.19
1795 1816 1.820010 CTTTTTGGTGGAGCAGGGCC 61.820 60.000 0.00 0.00 0.00 5.80
1796 1817 0.827507 TCTTTTTGGTGGAGCAGGGC 60.828 55.000 0.00 0.00 0.00 5.19
1797 1818 1.703411 TTCTTTTTGGTGGAGCAGGG 58.297 50.000 0.00 0.00 0.00 4.45
1798 1819 3.817709 TTTTCTTTTTGGTGGAGCAGG 57.182 42.857 0.00 0.00 0.00 4.85
1799 1820 4.986659 CAGATTTTCTTTTTGGTGGAGCAG 59.013 41.667 0.00 0.00 0.00 4.24
1800 1821 4.202243 CCAGATTTTCTTTTTGGTGGAGCA 60.202 41.667 0.00 0.00 0.00 4.26
1801 1822 4.039124 TCCAGATTTTCTTTTTGGTGGAGC 59.961 41.667 0.00 0.00 0.00 4.70
1802 1823 5.776744 CTCCAGATTTTCTTTTTGGTGGAG 58.223 41.667 0.00 0.00 42.83 3.86
1803 1824 5.208121 ACTCCAGATTTTCTTTTTGGTGGA 58.792 37.500 0.00 0.00 0.00 4.02
1804 1825 5.535753 ACTCCAGATTTTCTTTTTGGTGG 57.464 39.130 0.00 0.00 0.00 4.61
1805 1826 7.848223 AAAACTCCAGATTTTCTTTTTGGTG 57.152 32.000 0.00 0.00 0.00 4.17
1806 1827 7.552687 GGAAAAACTCCAGATTTTCTTTTTGGT 59.447 33.333 16.93 0.00 44.67 3.67
1807 1828 7.919690 GGAAAAACTCCAGATTTTCTTTTTGG 58.080 34.615 16.93 0.00 44.67 3.28
1822 1843 7.067859 GGGTTGTAATAGTATGGGAAAAACTCC 59.932 40.741 0.00 0.00 44.54 3.85
1823 1844 7.612633 TGGGTTGTAATAGTATGGGAAAAACTC 59.387 37.037 0.00 0.00 0.00 3.01
1824 1845 7.471890 TGGGTTGTAATAGTATGGGAAAAACT 58.528 34.615 0.00 0.00 0.00 2.66
1825 1846 7.706100 TGGGTTGTAATAGTATGGGAAAAAC 57.294 36.000 0.00 0.00 0.00 2.43
1826 1847 7.951245 ACTTGGGTTGTAATAGTATGGGAAAAA 59.049 33.333 0.00 0.00 0.00 1.94
1827 1848 7.394923 CACTTGGGTTGTAATAGTATGGGAAAA 59.605 37.037 0.00 0.00 0.00 2.29
1828 1849 6.887545 CACTTGGGTTGTAATAGTATGGGAAA 59.112 38.462 0.00 0.00 0.00 3.13
1829 1850 6.419791 CACTTGGGTTGTAATAGTATGGGAA 58.580 40.000 0.00 0.00 0.00 3.97
1830 1851 5.630539 GCACTTGGGTTGTAATAGTATGGGA 60.631 44.000 0.00 0.00 0.00 4.37
1831 1852 4.578928 GCACTTGGGTTGTAATAGTATGGG 59.421 45.833 0.00 0.00 0.00 4.00
1832 1853 5.189928 TGCACTTGGGTTGTAATAGTATGG 58.810 41.667 0.00 0.00 0.00 2.74
1833 1854 6.150307 TGTTGCACTTGGGTTGTAATAGTATG 59.850 38.462 0.00 0.00 0.00 2.39
1834 1855 6.150474 GTGTTGCACTTGGGTTGTAATAGTAT 59.850 38.462 0.00 0.00 0.00 2.12
1835 1856 5.470777 GTGTTGCACTTGGGTTGTAATAGTA 59.529 40.000 0.00 0.00 0.00 1.82
1836 1857 4.277423 GTGTTGCACTTGGGTTGTAATAGT 59.723 41.667 0.00 0.00 0.00 2.12
1837 1858 4.518970 AGTGTTGCACTTGGGTTGTAATAG 59.481 41.667 0.00 0.00 42.59 1.73
1838 1859 4.465886 AGTGTTGCACTTGGGTTGTAATA 58.534 39.130 0.00 0.00 42.59 0.98
1839 1860 3.295973 AGTGTTGCACTTGGGTTGTAAT 58.704 40.909 0.00 0.00 42.59 1.89
1840 1861 2.729194 AGTGTTGCACTTGGGTTGTAA 58.271 42.857 0.00 0.00 42.59 2.41
1841 1862 2.428544 AGTGTTGCACTTGGGTTGTA 57.571 45.000 0.00 0.00 42.59 2.41
1842 1863 3.281332 AGTGTTGCACTTGGGTTGT 57.719 47.368 0.00 0.00 42.59 3.32
1851 1872 1.740025 GAGATGCCCTAAGTGTTGCAC 59.260 52.381 0.00 0.00 36.41 4.57
1852 1873 1.630369 AGAGATGCCCTAAGTGTTGCA 59.370 47.619 0.00 0.00 38.23 4.08
1853 1874 2.409948 AGAGATGCCCTAAGTGTTGC 57.590 50.000 0.00 0.00 0.00 4.17
1854 1875 3.118629 TGCTAGAGATGCCCTAAGTGTTG 60.119 47.826 0.00 0.00 0.00 3.33
1855 1876 3.107601 TGCTAGAGATGCCCTAAGTGTT 58.892 45.455 0.00 0.00 0.00 3.32
1856 1877 2.697751 CTGCTAGAGATGCCCTAAGTGT 59.302 50.000 0.00 0.00 0.00 3.55
1857 1878 2.961741 TCTGCTAGAGATGCCCTAAGTG 59.038 50.000 0.00 0.00 0.00 3.16
1858 1879 2.962421 GTCTGCTAGAGATGCCCTAAGT 59.038 50.000 0.00 0.00 31.63 2.24
1859 1880 2.298729 GGTCTGCTAGAGATGCCCTAAG 59.701 54.545 0.00 0.00 31.63 2.18
1860 1881 2.320781 GGTCTGCTAGAGATGCCCTAA 58.679 52.381 0.00 0.00 31.63 2.69
1861 1882 1.481428 GGGTCTGCTAGAGATGCCCTA 60.481 57.143 0.00 0.00 35.09 3.53
1862 1883 0.762461 GGGTCTGCTAGAGATGCCCT 60.762 60.000 0.00 0.00 35.09 5.19
1863 1884 1.751563 GGGTCTGCTAGAGATGCCC 59.248 63.158 0.00 0.00 31.43 5.36
1864 1885 1.751563 GGGGTCTGCTAGAGATGCC 59.248 63.158 0.00 0.00 31.63 4.40
1865 1886 0.762461 AGGGGGTCTGCTAGAGATGC 60.762 60.000 0.00 0.00 31.63 3.91
1866 1887 1.415659 CAAGGGGGTCTGCTAGAGATG 59.584 57.143 0.00 0.00 31.63 2.90
1867 1888 1.799933 CAAGGGGGTCTGCTAGAGAT 58.200 55.000 0.00 0.00 31.63 2.75
1868 1889 0.978146 GCAAGGGGGTCTGCTAGAGA 60.978 60.000 0.00 0.00 0.00 3.10
1869 1890 0.980231 AGCAAGGGGGTCTGCTAGAG 60.980 60.000 0.00 0.00 35.68 2.43
1870 1891 0.338467 TAGCAAGGGGGTCTGCTAGA 59.662 55.000 0.00 0.00 38.66 2.43
1871 1892 1.204146 TTAGCAAGGGGGTCTGCTAG 58.796 55.000 4.19 0.00 40.38 3.42
1872 1893 1.663911 TTTAGCAAGGGGGTCTGCTA 58.336 50.000 0.00 0.00 38.66 3.49
1873 1894 1.002857 ATTTAGCAAGGGGGTCTGCT 58.997 50.000 1.78 1.78 40.96 4.24
1874 1895 1.064389 AGATTTAGCAAGGGGGTCTGC 60.064 52.381 0.00 0.00 0.00 4.26
1875 1896 3.456277 AGTAGATTTAGCAAGGGGGTCTG 59.544 47.826 0.00 0.00 0.00 3.51
1876 1897 3.737263 AGTAGATTTAGCAAGGGGGTCT 58.263 45.455 0.00 0.00 0.00 3.85
1877 1898 5.625568 TTAGTAGATTTAGCAAGGGGGTC 57.374 43.478 0.00 0.00 0.00 4.46
1878 1899 6.011893 ACTTTTAGTAGATTTAGCAAGGGGGT 60.012 38.462 0.00 0.00 0.00 4.95
1879 1900 6.318900 CACTTTTAGTAGATTTAGCAAGGGGG 59.681 42.308 0.00 0.00 0.00 5.40
1880 1901 6.183360 GCACTTTTAGTAGATTTAGCAAGGGG 60.183 42.308 0.00 0.00 0.00 4.79
1881 1902 6.599638 AGCACTTTTAGTAGATTTAGCAAGGG 59.400 38.462 0.00 0.00 0.00 3.95
1882 1903 7.201652 GGAGCACTTTTAGTAGATTTAGCAAGG 60.202 40.741 0.00 0.00 0.00 3.61
1883 1904 7.464710 CGGAGCACTTTTAGTAGATTTAGCAAG 60.465 40.741 0.00 0.00 0.00 4.01
1884 1905 6.312918 CGGAGCACTTTTAGTAGATTTAGCAA 59.687 38.462 0.00 0.00 0.00 3.91
1885 1906 5.810587 CGGAGCACTTTTAGTAGATTTAGCA 59.189 40.000 0.00 0.00 0.00 3.49
1886 1907 5.811100 ACGGAGCACTTTTAGTAGATTTAGC 59.189 40.000 0.00 0.00 0.00 3.09
1887 1908 9.182933 GATACGGAGCACTTTTAGTAGATTTAG 57.817 37.037 0.00 0.00 0.00 1.85
1888 1909 8.139989 GGATACGGAGCACTTTTAGTAGATTTA 58.860 37.037 0.00 0.00 0.00 1.40
1889 1910 6.985059 GGATACGGAGCACTTTTAGTAGATTT 59.015 38.462 0.00 0.00 0.00 2.17
1890 1911 6.462628 GGGATACGGAGCACTTTTAGTAGATT 60.463 42.308 0.00 0.00 37.60 2.40
1891 1912 5.010820 GGGATACGGAGCACTTTTAGTAGAT 59.989 44.000 0.00 0.00 37.60 1.98
1892 1913 4.340381 GGGATACGGAGCACTTTTAGTAGA 59.660 45.833 0.00 0.00 37.60 2.59
1893 1914 4.098960 TGGGATACGGAGCACTTTTAGTAG 59.901 45.833 0.00 0.00 37.60 2.57
1894 1915 4.025360 TGGGATACGGAGCACTTTTAGTA 58.975 43.478 0.00 0.00 37.60 1.82
1895 1916 2.835764 TGGGATACGGAGCACTTTTAGT 59.164 45.455 0.00 0.00 37.60 2.24
1896 1917 3.118738 AGTGGGATACGGAGCACTTTTAG 60.119 47.826 0.00 0.00 32.35 1.85
1897 1918 2.835764 AGTGGGATACGGAGCACTTTTA 59.164 45.455 0.00 0.00 32.35 1.52
1898 1919 1.628846 AGTGGGATACGGAGCACTTTT 59.371 47.619 0.00 0.00 32.35 2.27
1899 1920 1.276622 AGTGGGATACGGAGCACTTT 58.723 50.000 0.00 0.00 32.35 2.66
1900 1921 1.276622 AAGTGGGATACGGAGCACTT 58.723 50.000 0.00 0.00 39.53 3.16
1901 1922 1.276622 AAAGTGGGATACGGAGCACT 58.723 50.000 0.00 0.00 37.01 4.40
1902 1923 2.547826 GTAAAGTGGGATACGGAGCAC 58.452 52.381 0.00 0.00 37.60 4.40
1903 1924 1.483415 GGTAAAGTGGGATACGGAGCA 59.517 52.381 0.00 0.00 37.60 4.26
1904 1925 1.483415 TGGTAAAGTGGGATACGGAGC 59.517 52.381 0.00 0.00 37.60 4.70
1905 1926 4.417426 AATGGTAAAGTGGGATACGGAG 57.583 45.455 0.00 0.00 37.60 4.63
1906 1927 4.847990 AAATGGTAAAGTGGGATACGGA 57.152 40.909 0.00 0.00 37.60 4.69
1907 1928 5.907866 AAAAATGGTAAAGTGGGATACGG 57.092 39.130 0.00 0.00 37.60 4.02
1928 1949 8.250332 GCTGGGAAATAGTGATTTTCATACAAA 58.750 33.333 0.00 0.00 35.33 2.83
1929 1950 7.615365 AGCTGGGAAATAGTGATTTTCATACAA 59.385 33.333 0.00 0.00 35.33 2.41
1930 1951 7.118723 AGCTGGGAAATAGTGATTTTCATACA 58.881 34.615 0.00 0.00 35.33 2.29
1931 1952 7.573968 AGCTGGGAAATAGTGATTTTCATAC 57.426 36.000 0.00 0.00 35.33 2.39
1932 1953 7.445402 GCTAGCTGGGAAATAGTGATTTTCATA 59.555 37.037 7.70 0.00 35.33 2.15
1933 1954 6.264067 GCTAGCTGGGAAATAGTGATTTTCAT 59.736 38.462 7.70 0.00 35.33 2.57
1934 1955 5.590259 GCTAGCTGGGAAATAGTGATTTTCA 59.410 40.000 7.70 0.00 35.33 2.69
1935 1956 5.590259 TGCTAGCTGGGAAATAGTGATTTTC 59.410 40.000 17.23 0.00 35.33 2.29
1936 1957 5.509498 TGCTAGCTGGGAAATAGTGATTTT 58.491 37.500 17.23 0.00 35.33 1.82
1937 1958 5.104360 TCTGCTAGCTGGGAAATAGTGATTT 60.104 40.000 20.06 0.00 38.00 2.17
1938 1959 4.410228 TCTGCTAGCTGGGAAATAGTGATT 59.590 41.667 20.06 0.00 0.00 2.57
1939 1960 3.969976 TCTGCTAGCTGGGAAATAGTGAT 59.030 43.478 20.06 0.00 0.00 3.06
1940 1961 3.374764 TCTGCTAGCTGGGAAATAGTGA 58.625 45.455 20.06 0.00 0.00 3.41
1941 1962 3.827008 TCTGCTAGCTGGGAAATAGTG 57.173 47.619 20.06 0.00 0.00 2.74
1942 1963 3.326297 GGATCTGCTAGCTGGGAAATAGT 59.674 47.826 20.06 0.00 0.00 2.12
1943 1964 3.307339 GGGATCTGCTAGCTGGGAAATAG 60.307 52.174 20.06 5.03 0.00 1.73
1944 1965 2.639839 GGGATCTGCTAGCTGGGAAATA 59.360 50.000 20.06 1.62 0.00 1.40
1945 1966 1.423161 GGGATCTGCTAGCTGGGAAAT 59.577 52.381 20.06 7.40 0.00 2.17
1946 1967 0.839946 GGGATCTGCTAGCTGGGAAA 59.160 55.000 20.06 2.69 0.00 3.13
1947 1968 0.326522 TGGGATCTGCTAGCTGGGAA 60.327 55.000 20.06 3.04 0.00 3.97
1948 1969 0.104777 ATGGGATCTGCTAGCTGGGA 60.105 55.000 20.06 13.49 0.00 4.37
1949 1970 1.649321 TATGGGATCTGCTAGCTGGG 58.351 55.000 20.06 8.83 0.00 4.45
1950 1971 2.170187 GGATATGGGATCTGCTAGCTGG 59.830 54.545 20.06 11.19 0.00 4.85
1951 1972 3.106054 AGGATATGGGATCTGCTAGCTG 58.894 50.000 17.23 16.05 0.00 4.24
1952 1973 3.488355 AGGATATGGGATCTGCTAGCT 57.512 47.619 17.23 0.00 0.00 3.32
1953 1974 6.985653 TTATAGGATATGGGATCTGCTAGC 57.014 41.667 8.10 8.10 0.00 3.42
1956 1977 9.471702 CAAAATTTATAGGATATGGGATCTGCT 57.528 33.333 0.00 0.00 0.00 4.24
1957 1978 9.247861 ACAAAATTTATAGGATATGGGATCTGC 57.752 33.333 0.00 0.00 0.00 4.26
1962 1983 9.928618 TGTGAACAAAATTTATAGGATATGGGA 57.071 29.630 0.00 0.00 0.00 4.37
1980 2001 9.195411 GCAATAGATTTCAAGATTTGTGAACAA 57.805 29.630 0.00 0.00 34.78 2.83
1981 2002 8.579006 AGCAATAGATTTCAAGATTTGTGAACA 58.421 29.630 0.00 0.00 34.78 3.18
1982 2003 8.976986 AGCAATAGATTTCAAGATTTGTGAAC 57.023 30.769 0.00 0.00 34.78 3.18
1983 2004 8.795513 TGAGCAATAGATTTCAAGATTTGTGAA 58.204 29.630 0.00 0.00 33.21 3.18
1984 2005 8.339344 TGAGCAATAGATTTCAAGATTTGTGA 57.661 30.769 0.00 0.00 0.00 3.58
1985 2006 8.975410 TTGAGCAATAGATTTCAAGATTTGTG 57.025 30.769 0.00 0.00 0.00 3.33
2002 2023 9.932207 TCAATTTGTTAGAATGATTTGAGCAAT 57.068 25.926 0.00 0.00 0.00 3.56
2003 2024 9.195411 GTCAATTTGTTAGAATGATTTGAGCAA 57.805 29.630 0.00 0.00 0.00 3.91
2004 2025 7.814107 GGTCAATTTGTTAGAATGATTTGAGCA 59.186 33.333 0.00 0.00 0.00 4.26
2005 2026 8.031277 AGGTCAATTTGTTAGAATGATTTGAGC 58.969 33.333 0.00 0.00 0.00 4.26
2006 2027 9.565213 GAGGTCAATTTGTTAGAATGATTTGAG 57.435 33.333 0.00 0.00 0.00 3.02
2007 2028 9.076781 TGAGGTCAATTTGTTAGAATGATTTGA 57.923 29.630 0.00 0.00 0.00 2.69
2008 2029 9.865321 ATGAGGTCAATTTGTTAGAATGATTTG 57.135 29.630 0.00 0.00 0.00 2.32
2012 2033 9.076781 TGAAATGAGGTCAATTTGTTAGAATGA 57.923 29.630 0.00 0.00 0.00 2.57
2013 2034 9.695526 TTGAAATGAGGTCAATTTGTTAGAATG 57.304 29.630 0.00 0.00 30.08 2.67
2014 2035 9.696917 GTTGAAATGAGGTCAATTTGTTAGAAT 57.303 29.630 0.00 0.00 37.34 2.40
2015 2036 8.690884 TGTTGAAATGAGGTCAATTTGTTAGAA 58.309 29.630 0.00 0.00 37.34 2.10
2016 2037 8.134895 GTGTTGAAATGAGGTCAATTTGTTAGA 58.865 33.333 0.00 0.00 37.34 2.10
2017 2038 7.920151 TGTGTTGAAATGAGGTCAATTTGTTAG 59.080 33.333 0.00 0.00 37.34 2.34
2018 2039 7.776107 TGTGTTGAAATGAGGTCAATTTGTTA 58.224 30.769 0.00 0.00 37.34 2.41
2019 2040 6.638610 TGTGTTGAAATGAGGTCAATTTGTT 58.361 32.000 0.00 0.00 37.34 2.83
2020 2041 6.219417 TGTGTTGAAATGAGGTCAATTTGT 57.781 33.333 0.00 0.00 37.34 2.83
2021 2042 7.064371 TGTTTGTGTTGAAATGAGGTCAATTTG 59.936 33.333 0.00 0.00 37.34 2.32
2022 2043 7.102346 TGTTTGTGTTGAAATGAGGTCAATTT 58.898 30.769 0.00 0.00 37.34 1.82
2023 2044 6.638610 TGTTTGTGTTGAAATGAGGTCAATT 58.361 32.000 0.00 0.00 37.34 2.32
2024 2045 6.219417 TGTTTGTGTTGAAATGAGGTCAAT 57.781 33.333 0.00 0.00 37.34 2.57
2025 2046 5.651387 TGTTTGTGTTGAAATGAGGTCAA 57.349 34.783 0.00 0.00 32.62 3.18
2026 2047 5.850557 ATGTTTGTGTTGAAATGAGGTCA 57.149 34.783 0.00 0.00 0.00 4.02
2027 2048 6.970484 ACTATGTTTGTGTTGAAATGAGGTC 58.030 36.000 0.00 0.00 0.00 3.85
2028 2049 6.959639 ACTATGTTTGTGTTGAAATGAGGT 57.040 33.333 0.00 0.00 0.00 3.85
2029 2050 9.912634 AAATACTATGTTTGTGTTGAAATGAGG 57.087 29.630 0.00 0.00 0.00 3.86
2055 2076 8.305317 TGAAGTGTGATATGATGCATTCAAAAA 58.695 29.630 0.00 0.00 38.03 1.94
2056 2077 7.828712 TGAAGTGTGATATGATGCATTCAAAA 58.171 30.769 0.00 0.00 38.03 2.44
2057 2078 7.393841 TGAAGTGTGATATGATGCATTCAAA 57.606 32.000 0.00 0.00 38.03 2.69
2058 2079 7.121611 AGTTGAAGTGTGATATGATGCATTCAA 59.878 33.333 0.00 0.00 38.03 2.69
2059 2080 6.600427 AGTTGAAGTGTGATATGATGCATTCA 59.400 34.615 0.00 0.00 39.12 2.57
2060 2081 7.024340 AGTTGAAGTGTGATATGATGCATTC 57.976 36.000 0.00 0.00 0.00 2.67
2061 2082 7.254556 CGTAGTTGAAGTGTGATATGATGCATT 60.255 37.037 0.00 0.00 0.00 3.56
2062 2083 6.201615 CGTAGTTGAAGTGTGATATGATGCAT 59.798 38.462 0.00 0.00 0.00 3.96
2063 2084 5.519927 CGTAGTTGAAGTGTGATATGATGCA 59.480 40.000 0.00 0.00 0.00 3.96
2064 2085 5.748630 TCGTAGTTGAAGTGTGATATGATGC 59.251 40.000 0.00 0.00 0.00 3.91
2065 2086 6.199154 GGTCGTAGTTGAAGTGTGATATGATG 59.801 42.308 0.00 0.00 0.00 3.07
2066 2087 6.127451 TGGTCGTAGTTGAAGTGTGATATGAT 60.127 38.462 0.00 0.00 0.00 2.45
2067 2088 5.184287 TGGTCGTAGTTGAAGTGTGATATGA 59.816 40.000 0.00 0.00 0.00 2.15
2068 2089 5.407502 TGGTCGTAGTTGAAGTGTGATATG 58.592 41.667 0.00 0.00 0.00 1.78
2069 2090 5.654603 TGGTCGTAGTTGAAGTGTGATAT 57.345 39.130 0.00 0.00 0.00 1.63
2070 2091 5.654603 ATGGTCGTAGTTGAAGTGTGATA 57.345 39.130 0.00 0.00 0.00 2.15
2071 2092 4.537135 ATGGTCGTAGTTGAAGTGTGAT 57.463 40.909 0.00 0.00 0.00 3.06
2072 2093 5.456548 TTATGGTCGTAGTTGAAGTGTGA 57.543 39.130 0.00 0.00 0.00 3.58
2073 2094 6.721571 ATTTATGGTCGTAGTTGAAGTGTG 57.278 37.500 0.00 0.00 0.00 3.82
2074 2095 9.745880 CTATATTTATGGTCGTAGTTGAAGTGT 57.254 33.333 0.00 0.00 0.00 3.55
2075 2096 9.745880 ACTATATTTATGGTCGTAGTTGAAGTG 57.254 33.333 0.00 0.00 0.00 3.16
2080 2101 8.975439 GGTCAACTATATTTATGGTCGTAGTTG 58.025 37.037 13.88 13.88 44.98 3.16
2081 2102 8.698210 TGGTCAACTATATTTATGGTCGTAGTT 58.302 33.333 0.00 0.00 33.90 2.24
2082 2103 8.241497 TGGTCAACTATATTTATGGTCGTAGT 57.759 34.615 0.00 0.00 0.00 2.73
2083 2104 9.537192 TTTGGTCAACTATATTTATGGTCGTAG 57.463 33.333 0.00 0.00 0.00 3.51
2085 2106 8.974060 ATTTGGTCAACTATATTTATGGTCGT 57.026 30.769 0.00 0.00 0.00 4.34
2086 2107 9.273016 AGATTTGGTCAACTATATTTATGGTCG 57.727 33.333 0.00 0.00 0.00 4.79
2097 2118 9.770097 CTATGTGTGATAGATTTGGTCAACTAT 57.230 33.333 0.00 0.00 0.00 2.12
2098 2119 7.710907 GCTATGTGTGATAGATTTGGTCAACTA 59.289 37.037 0.00 0.00 0.00 2.24
2099 2120 6.540189 GCTATGTGTGATAGATTTGGTCAACT 59.460 38.462 0.00 0.00 0.00 3.16
2100 2121 6.238484 GGCTATGTGTGATAGATTTGGTCAAC 60.238 42.308 0.00 0.00 0.00 3.18
2101 2122 5.822519 GGCTATGTGTGATAGATTTGGTCAA 59.177 40.000 0.00 0.00 0.00 3.18
2102 2123 5.104569 TGGCTATGTGTGATAGATTTGGTCA 60.105 40.000 0.00 0.00 0.00 4.02
2103 2124 5.237344 GTGGCTATGTGTGATAGATTTGGTC 59.763 44.000 0.00 0.00 0.00 4.02
2104 2125 5.126067 GTGGCTATGTGTGATAGATTTGGT 58.874 41.667 0.00 0.00 0.00 3.67
2105 2126 5.125356 TGTGGCTATGTGTGATAGATTTGG 58.875 41.667 0.00 0.00 0.00 3.28
2106 2127 6.317140 AGTTGTGGCTATGTGTGATAGATTTG 59.683 38.462 0.00 0.00 0.00 2.32
2107 2128 6.418101 AGTTGTGGCTATGTGTGATAGATTT 58.582 36.000 0.00 0.00 0.00 2.17
2108 2129 5.994250 AGTTGTGGCTATGTGTGATAGATT 58.006 37.500 0.00 0.00 0.00 2.40
2109 2130 5.620738 AGTTGTGGCTATGTGTGATAGAT 57.379 39.130 0.00 0.00 0.00 1.98
2110 2131 5.420725 AAGTTGTGGCTATGTGTGATAGA 57.579 39.130 0.00 0.00 0.00 1.98
2111 2132 6.317088 CAAAAGTTGTGGCTATGTGTGATAG 58.683 40.000 0.00 0.00 0.00 2.08
2112 2133 5.335583 GCAAAAGTTGTGGCTATGTGTGATA 60.336 40.000 0.00 0.00 0.00 2.15
2113 2134 4.559300 GCAAAAGTTGTGGCTATGTGTGAT 60.559 41.667 0.00 0.00 0.00 3.06
2114 2135 3.243367 GCAAAAGTTGTGGCTATGTGTGA 60.243 43.478 0.00 0.00 0.00 3.58
2115 2136 3.052036 GCAAAAGTTGTGGCTATGTGTG 58.948 45.455 0.00 0.00 0.00 3.82
2116 2137 2.035832 GGCAAAAGTTGTGGCTATGTGT 59.964 45.455 12.26 0.00 38.46 3.72
2117 2138 2.035704 TGGCAAAAGTTGTGGCTATGTG 59.964 45.455 19.46 0.00 41.87 3.21
2118 2139 2.315176 TGGCAAAAGTTGTGGCTATGT 58.685 42.857 19.46 0.00 41.87 2.29
2119 2140 3.383620 TTGGCAAAAGTTGTGGCTATG 57.616 42.857 19.46 0.00 41.87 2.23
2120 2141 4.379652 CTTTTGGCAAAAGTTGTGGCTAT 58.620 39.130 33.95 0.00 42.23 2.97
2121 2142 3.431486 CCTTTTGGCAAAAGTTGTGGCTA 60.431 43.478 36.95 10.20 44.96 3.93
2122 2143 2.631267 CTTTTGGCAAAAGTTGTGGCT 58.369 42.857 33.95 0.00 42.23 4.75
2123 2144 1.670295 CCTTTTGGCAAAAGTTGTGGC 59.330 47.619 36.95 12.62 44.96 5.01
2136 2157 2.836262 TGCTCATTTTGTGCCTTTTGG 58.164 42.857 0.00 0.00 44.18 3.28
2137 2158 3.872771 ACTTGCTCATTTTGTGCCTTTTG 59.127 39.130 0.00 0.00 36.15 2.44
2138 2159 4.141233 ACTTGCTCATTTTGTGCCTTTT 57.859 36.364 0.00 0.00 36.15 2.27
2139 2160 3.825143 ACTTGCTCATTTTGTGCCTTT 57.175 38.095 0.00 0.00 36.15 3.11
2140 2161 3.132646 TGAACTTGCTCATTTTGTGCCTT 59.867 39.130 0.00 0.00 36.15 4.35
2141 2162 2.694628 TGAACTTGCTCATTTTGTGCCT 59.305 40.909 0.00 0.00 36.15 4.75
2142 2163 3.096489 TGAACTTGCTCATTTTGTGCC 57.904 42.857 0.00 0.00 36.15 5.01
2143 2164 4.986659 AGAATGAACTTGCTCATTTTGTGC 59.013 37.500 0.96 0.00 44.29 4.57
2144 2165 8.578308 TTTAGAATGAACTTGCTCATTTTGTG 57.422 30.769 0.96 0.00 44.29 3.33
2145 2166 9.598517 TTTTTAGAATGAACTTGCTCATTTTGT 57.401 25.926 0.96 0.00 44.29 2.83
2147 2168 8.768019 GCTTTTTAGAATGAACTTGCTCATTTT 58.232 29.630 0.96 0.00 44.29 1.82
2148 2169 7.386025 GGCTTTTTAGAATGAACTTGCTCATTT 59.614 33.333 0.96 0.00 44.29 2.32
2149 2170 6.870439 GGCTTTTTAGAATGAACTTGCTCATT 59.130 34.615 0.00 0.00 46.38 2.57
2150 2171 6.015180 TGGCTTTTTAGAATGAACTTGCTCAT 60.015 34.615 0.00 0.00 37.66 2.90
2151 2172 5.301551 TGGCTTTTTAGAATGAACTTGCTCA 59.698 36.000 0.00 0.00 0.00 4.26
2152 2173 5.631096 GTGGCTTTTTAGAATGAACTTGCTC 59.369 40.000 0.00 0.00 0.00 4.26
2153 2174 5.509670 GGTGGCTTTTTAGAATGAACTTGCT 60.510 40.000 0.00 0.00 0.00 3.91
2154 2175 4.686091 GGTGGCTTTTTAGAATGAACTTGC 59.314 41.667 0.00 0.00 0.00 4.01
2155 2176 5.841810 TGGTGGCTTTTTAGAATGAACTTG 58.158 37.500 0.00 0.00 0.00 3.16
2156 2177 6.323739 TCTTGGTGGCTTTTTAGAATGAACTT 59.676 34.615 0.00 0.00 0.00 2.66
2157 2178 5.833131 TCTTGGTGGCTTTTTAGAATGAACT 59.167 36.000 0.00 0.00 0.00 3.01
2158 2179 5.920840 GTCTTGGTGGCTTTTTAGAATGAAC 59.079 40.000 0.00 0.00 0.00 3.18
2159 2180 5.596361 TGTCTTGGTGGCTTTTTAGAATGAA 59.404 36.000 0.00 0.00 0.00 2.57
2160 2181 5.009610 GTGTCTTGGTGGCTTTTTAGAATGA 59.990 40.000 0.00 0.00 0.00 2.57
2161 2182 5.222631 GTGTCTTGGTGGCTTTTTAGAATG 58.777 41.667 0.00 0.00 0.00 2.67
2162 2183 4.023193 CGTGTCTTGGTGGCTTTTTAGAAT 60.023 41.667 0.00 0.00 0.00 2.40
2163 2184 3.314080 CGTGTCTTGGTGGCTTTTTAGAA 59.686 43.478 0.00 0.00 0.00 2.10
2164 2185 2.875933 CGTGTCTTGGTGGCTTTTTAGA 59.124 45.455 0.00 0.00 0.00 2.10
2165 2186 2.031157 CCGTGTCTTGGTGGCTTTTTAG 60.031 50.000 0.00 0.00 0.00 1.85
2166 2187 1.950909 CCGTGTCTTGGTGGCTTTTTA 59.049 47.619 0.00 0.00 0.00 1.52
2167 2188 0.744281 CCGTGTCTTGGTGGCTTTTT 59.256 50.000 0.00 0.00 0.00 1.94
2168 2189 0.395173 ACCGTGTCTTGGTGGCTTTT 60.395 50.000 0.00 0.00 38.60 2.27
2169 2190 1.226262 ACCGTGTCTTGGTGGCTTT 59.774 52.632 0.00 0.00 38.60 3.51
2170 2191 2.915869 ACCGTGTCTTGGTGGCTT 59.084 55.556 0.00 0.00 38.60 4.35
2175 2196 3.478857 TTTGATACACCGTGTCTTGGT 57.521 42.857 7.63 0.00 41.47 3.67
2176 2197 3.426159 GCATTTGATACACCGTGTCTTGG 60.426 47.826 7.63 0.00 0.00 3.61
2177 2198 3.426159 GGCATTTGATACACCGTGTCTTG 60.426 47.826 7.63 0.00 0.00 3.02
2178 2199 2.747446 GGCATTTGATACACCGTGTCTT 59.253 45.455 7.63 0.00 0.00 3.01
2179 2200 2.290008 TGGCATTTGATACACCGTGTCT 60.290 45.455 7.63 0.00 0.00 3.41
2180 2201 2.080693 TGGCATTTGATACACCGTGTC 58.919 47.619 7.63 0.00 0.00 3.67
2181 2202 1.810151 GTGGCATTTGATACACCGTGT 59.190 47.619 9.58 9.58 0.00 4.49
2182 2203 1.132262 GGTGGCATTTGATACACCGTG 59.868 52.381 0.00 0.00 43.28 4.94
2183 2204 1.459450 GGTGGCATTTGATACACCGT 58.541 50.000 0.00 0.00 43.28 4.83
2186 2207 5.356751 TGAACTATGGTGGCATTTGATACAC 59.643 40.000 0.00 0.00 0.00 2.90
2187 2208 5.504853 TGAACTATGGTGGCATTTGATACA 58.495 37.500 0.00 0.00 0.00 2.29
2188 2209 6.449635 TTGAACTATGGTGGCATTTGATAC 57.550 37.500 0.00 0.00 0.00 2.24
2189 2210 7.658525 ATTTGAACTATGGTGGCATTTGATA 57.341 32.000 0.00 0.00 0.00 2.15
2190 2211 5.999205 TTTGAACTATGGTGGCATTTGAT 57.001 34.783 0.00 0.00 0.00 2.57
2191 2212 5.999205 ATTTGAACTATGGTGGCATTTGA 57.001 34.783 0.00 0.00 0.00 2.69
2192 2213 6.275335 CCTATTTGAACTATGGTGGCATTTG 58.725 40.000 0.00 0.00 0.00 2.32
2193 2214 5.163416 GCCTATTTGAACTATGGTGGCATTT 60.163 40.000 0.00 0.00 37.91 2.32
2194 2215 4.342092 GCCTATTTGAACTATGGTGGCATT 59.658 41.667 0.00 0.00 37.91 3.56
2195 2216 3.891366 GCCTATTTGAACTATGGTGGCAT 59.109 43.478 0.00 0.00 37.91 4.40
2196 2217 3.053693 AGCCTATTTGAACTATGGTGGCA 60.054 43.478 7.13 0.00 40.18 4.92
2197 2218 3.555966 AGCCTATTTGAACTATGGTGGC 58.444 45.455 0.00 0.00 38.24 5.01
2198 2219 4.780815 TGAGCCTATTTGAACTATGGTGG 58.219 43.478 0.00 0.00 0.00 4.61
2199 2220 6.057533 TCATGAGCCTATTTGAACTATGGTG 58.942 40.000 0.00 0.00 0.00 4.17
2200 2221 6.252599 TCATGAGCCTATTTGAACTATGGT 57.747 37.500 0.00 0.00 0.00 3.55
2201 2222 6.016777 GGTTCATGAGCCTATTTGAACTATGG 60.017 42.308 20.48 0.00 44.57 2.74
2202 2223 6.543465 TGGTTCATGAGCCTATTTGAACTATG 59.457 38.462 26.58 0.00 44.57 2.23
2203 2224 6.543831 GTGGTTCATGAGCCTATTTGAACTAT 59.456 38.462 26.58 0.00 44.57 2.12
2204 2225 5.880332 GTGGTTCATGAGCCTATTTGAACTA 59.120 40.000 26.58 2.25 44.57 2.24
2205 2226 4.702131 GTGGTTCATGAGCCTATTTGAACT 59.298 41.667 26.58 0.00 44.57 3.01
2206 2227 4.142381 GGTGGTTCATGAGCCTATTTGAAC 60.142 45.833 26.58 15.33 44.48 3.18
2207 2228 4.016444 GGTGGTTCATGAGCCTATTTGAA 58.984 43.478 26.58 4.41 32.40 2.69
2208 2229 3.620488 GGTGGTTCATGAGCCTATTTGA 58.380 45.455 26.58 5.12 32.40 2.69
2209 2230 2.355756 CGGTGGTTCATGAGCCTATTTG 59.644 50.000 26.58 10.40 32.40 2.32
2210 2231 2.643551 CGGTGGTTCATGAGCCTATTT 58.356 47.619 26.58 0.00 32.40 1.40
2211 2232 1.747206 GCGGTGGTTCATGAGCCTATT 60.747 52.381 26.58 0.00 32.40 1.73
2212 2233 0.179045 GCGGTGGTTCATGAGCCTAT 60.179 55.000 26.58 0.00 32.40 2.57
2213 2234 1.220749 GCGGTGGTTCATGAGCCTA 59.779 57.895 26.58 12.35 32.40 3.93
2214 2235 2.045926 GCGGTGGTTCATGAGCCT 60.046 61.111 26.58 0.00 32.40 4.58
2215 2236 3.134127 GGCGGTGGTTCATGAGCC 61.134 66.667 20.90 20.90 37.61 4.70
2216 2237 1.244019 AAAGGCGGTGGTTCATGAGC 61.244 55.000 0.04 0.04 0.00 4.26
2217 2238 0.523072 CAAAGGCGGTGGTTCATGAG 59.477 55.000 0.00 0.00 0.00 2.90
2218 2239 1.523154 GCAAAGGCGGTGGTTCATGA 61.523 55.000 0.00 0.00 0.00 3.07
2219 2240 1.080569 GCAAAGGCGGTGGTTCATG 60.081 57.895 0.00 0.00 0.00 3.07
2220 2241 2.275380 GGCAAAGGCGGTGGTTCAT 61.275 57.895 0.00 0.00 42.47 2.57
2221 2242 2.909965 GGCAAAGGCGGTGGTTCA 60.910 61.111 0.00 0.00 42.47 3.18
2222 2243 2.212900 GATGGCAAAGGCGGTGGTTC 62.213 60.000 0.00 0.00 42.47 3.62
2223 2244 2.203625 ATGGCAAAGGCGGTGGTT 60.204 55.556 0.00 0.00 42.47 3.67
2224 2245 2.676471 GATGGCAAAGGCGGTGGT 60.676 61.111 0.00 0.00 42.47 4.16
2225 2246 2.361610 AGATGGCAAAGGCGGTGG 60.362 61.111 0.00 0.00 42.47 4.61
2226 2247 2.879907 CAGATGGCAAAGGCGGTG 59.120 61.111 0.00 0.00 42.47 4.94
2227 2248 3.064324 GCAGATGGCAAAGGCGGT 61.064 61.111 0.00 0.00 43.97 5.68
2236 2257 2.034687 AGTGGTGGTGCAGATGGC 59.965 61.111 0.00 0.00 45.13 4.40
2237 2258 2.338015 GCAGTGGTGGTGCAGATGG 61.338 63.158 0.00 0.00 40.86 3.51
2238 2259 2.338015 GGCAGTGGTGGTGCAGATG 61.338 63.158 0.00 0.00 43.12 2.90
2239 2260 2.034687 GGCAGTGGTGGTGCAGAT 59.965 61.111 0.00 0.00 43.12 2.90
2240 2261 3.170672 AGGCAGTGGTGGTGCAGA 61.171 61.111 0.00 0.00 43.12 4.26
2241 2262 2.981909 CAGGCAGTGGTGGTGCAG 60.982 66.667 0.00 0.00 43.12 4.41
2244 2265 3.289834 GTGCAGGCAGTGGTGGTG 61.290 66.667 0.00 0.00 0.00 4.17
2245 2266 4.586235 GGTGCAGGCAGTGGTGGT 62.586 66.667 0.00 0.00 0.00 4.16
2246 2267 3.873679 ATGGTGCAGGCAGTGGTGG 62.874 63.158 0.00 0.00 0.00 4.61
2247 2268 2.282674 ATGGTGCAGGCAGTGGTG 60.283 61.111 0.00 0.00 0.00 4.17
2248 2269 2.034687 GATGGTGCAGGCAGTGGT 59.965 61.111 0.00 0.00 0.00 4.16
2249 2270 3.129502 CGATGGTGCAGGCAGTGG 61.130 66.667 0.00 0.00 0.00 4.00
2250 2271 3.807538 GCGATGGTGCAGGCAGTG 61.808 66.667 0.00 0.00 34.15 3.66
2255 2276 4.720902 TGGTGGCGATGGTGCAGG 62.721 66.667 0.00 0.00 36.28 4.85
2256 2277 2.267351 TTTGGTGGCGATGGTGCAG 61.267 57.895 0.00 0.00 36.28 4.41
2257 2278 2.203408 TTTGGTGGCGATGGTGCA 60.203 55.556 0.00 0.00 36.28 4.57
2258 2279 1.876497 ATGTTTGGTGGCGATGGTGC 61.876 55.000 0.00 0.00 0.00 5.01
2259 2280 0.171007 GATGTTTGGTGGCGATGGTG 59.829 55.000 0.00 0.00 0.00 4.17
2260 2281 0.038166 AGATGTTTGGTGGCGATGGT 59.962 50.000 0.00 0.00 0.00 3.55
2261 2282 1.176527 AAGATGTTTGGTGGCGATGG 58.823 50.000 0.00 0.00 0.00 3.51
2262 2283 2.223340 GCTAAGATGTTTGGTGGCGATG 60.223 50.000 0.00 0.00 0.00 3.84
2263 2284 2.017049 GCTAAGATGTTTGGTGGCGAT 58.983 47.619 0.00 0.00 0.00 4.58
2264 2285 1.448985 GCTAAGATGTTTGGTGGCGA 58.551 50.000 0.00 0.00 0.00 5.54
2265 2286 0.451783 GGCTAAGATGTTTGGTGGCG 59.548 55.000 0.00 0.00 0.00 5.69
2266 2287 1.544724 TGGCTAAGATGTTTGGTGGC 58.455 50.000 0.00 0.00 0.00 5.01
2267 2288 3.788333 CATGGCTAAGATGTTTGGTGG 57.212 47.619 0.00 0.00 0.00 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.