Multiple sequence alignment - TraesCS4A01G146900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G146900 chr4A 100.000 7278 0 0 1 7278 259749513 259756790 0.000000e+00 13441.0
1 TraesCS4A01G146900 chr4B 95.195 2976 109 17 1524 4479 323786814 323789775 0.000000e+00 4673.0
2 TraesCS4A01G146900 chr4B 92.850 1007 47 16 5557 6552 323791333 323792325 0.000000e+00 1437.0
3 TraesCS4A01G146900 chr4B 88.953 869 62 12 4471 5309 323790101 323790965 0.000000e+00 1042.0
4 TraesCS4A01G146900 chr4B 90.273 586 29 8 6721 7278 323793091 323793676 0.000000e+00 741.0
5 TraesCS4A01G146900 chr4B 93.947 413 9 5 924 1335 323784608 323785005 1.740000e-170 610.0
6 TraesCS4A01G146900 chr4B 95.833 264 11 0 5308 5571 323791048 323791311 1.880000e-115 427.0
7 TraesCS4A01G146900 chr4D 92.682 2692 119 25 2922 5571 231209825 231212480 0.000000e+00 3808.0
8 TraesCS4A01G146900 chr4D 95.312 2005 61 11 924 2926 231205650 231207623 0.000000e+00 3151.0
9 TraesCS4A01G146900 chr4D 91.477 1009 39 18 5557 6536 231212502 231213492 0.000000e+00 1343.0
10 TraesCS4A01G146900 chr4D 84.565 771 54 30 6549 7278 231214571 231215317 0.000000e+00 704.0
11 TraesCS4A01G146900 chr5D 87.954 689 70 9 1 677 534877848 534877161 0.000000e+00 800.0
12 TraesCS4A01G146900 chr5D 87.023 655 81 3 3 653 375050516 375051170 0.000000e+00 736.0
13 TraesCS4A01G146900 chr5D 77.596 183 19 9 751 913 388344354 388344174 2.800000e-14 91.6
14 TraesCS4A01G146900 chr7D 87.809 648 74 4 1 644 147016053 147015407 0.000000e+00 754.0
15 TraesCS4A01G146900 chr7D 86.890 656 82 3 1 653 5753055 5753709 0.000000e+00 732.0
16 TraesCS4A01G146900 chr7D 85.714 112 14 1 5446 5555 370183856 370183745 4.610000e-22 117.0
17 TraesCS4A01G146900 chr2B 86.982 676 80 5 1 672 700203643 700204314 0.000000e+00 754.0
18 TraesCS4A01G146900 chr2B 87.348 656 77 5 1 652 111691165 111690512 0.000000e+00 747.0
19 TraesCS4A01G146900 chr2B 85.057 696 90 8 1 687 773008649 773007959 0.000000e+00 697.0
20 TraesCS4A01G146900 chr2D 87.062 657 77 6 1 653 491336589 491337241 0.000000e+00 736.0
21 TraesCS4A01G146900 chr2D 78.689 183 18 9 750 913 476784214 476784394 1.290000e-17 102.0
22 TraesCS4A01G146900 chr2D 77.473 182 21 10 751 913 197865330 197865150 2.800000e-14 91.6
23 TraesCS4A01G146900 chr6D 87.097 651 76 5 1 644 417394250 417393601 0.000000e+00 730.0
24 TraesCS4A01G146900 chr3D 85.099 302 29 11 4820 5106 580152786 580153086 1.990000e-75 294.0
25 TraesCS4A01G146900 chr6B 76.923 481 63 20 2116 2550 46671870 46672348 5.680000e-56 230.0
26 TraesCS4A01G146900 chr7B 86.486 111 14 1 5446 5555 317234671 317234561 3.570000e-23 121.0
27 TraesCS4A01G146900 chr7A 86.486 111 14 1 5446 5555 409872926 409873036 3.570000e-23 121.0
28 TraesCS4A01G146900 chr7A 78.090 178 24 6 751 913 427348710 427348533 1.670000e-16 99.0
29 TraesCS4A01G146900 chr7A 76.216 185 18 11 753 913 151962244 151962426 2.820000e-09 75.0
30 TraesCS4A01G146900 chr5A 81.690 142 18 4 779 913 51665416 51665556 2.150000e-20 111.0
31 TraesCS4A01G146900 chr5A 78.212 179 20 10 753 913 644353054 644353231 6.010000e-16 97.1
32 TraesCS4A01G146900 chrUn 78.571 182 18 11 751 913 98338541 98338720 4.650000e-17 100.0
33 TraesCS4A01G146900 chr1B 77.049 183 21 11 750 913 499190905 499191085 1.300000e-12 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G146900 chr4A 259749513 259756790 7277 False 13441.000000 13441 100.000000 1 7278 1 chr4A.!!$F1 7277
1 TraesCS4A01G146900 chr4B 323784608 323793676 9068 False 1488.333333 4673 92.841833 924 7278 6 chr4B.!!$F1 6354
2 TraesCS4A01G146900 chr4D 231205650 231215317 9667 False 2251.500000 3808 91.009000 924 7278 4 chr4D.!!$F1 6354
3 TraesCS4A01G146900 chr5D 534877161 534877848 687 True 800.000000 800 87.954000 1 677 1 chr5D.!!$R2 676
4 TraesCS4A01G146900 chr5D 375050516 375051170 654 False 736.000000 736 87.023000 3 653 1 chr5D.!!$F1 650
5 TraesCS4A01G146900 chr7D 147015407 147016053 646 True 754.000000 754 87.809000 1 644 1 chr7D.!!$R1 643
6 TraesCS4A01G146900 chr7D 5753055 5753709 654 False 732.000000 732 86.890000 1 653 1 chr7D.!!$F1 652
7 TraesCS4A01G146900 chr2B 700203643 700204314 671 False 754.000000 754 86.982000 1 672 1 chr2B.!!$F1 671
8 TraesCS4A01G146900 chr2B 111690512 111691165 653 True 747.000000 747 87.348000 1 652 1 chr2B.!!$R1 651
9 TraesCS4A01G146900 chr2B 773007959 773008649 690 True 697.000000 697 85.057000 1 687 1 chr2B.!!$R2 686
10 TraesCS4A01G146900 chr2D 491336589 491337241 652 False 736.000000 736 87.062000 1 653 1 chr2D.!!$F2 652
11 TraesCS4A01G146900 chr6D 417393601 417394250 649 True 730.000000 730 87.097000 1 644 1 chr6D.!!$R1 643

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
701 725 0.042535 TGCGCTTTTTCGTTGTCGAG 60.043 50.000 9.73 0.00 46.81 4.04 F
722 746 0.101939 GGGGCGAACTAACCGAGTAG 59.898 60.000 0.00 0.00 37.44 2.57 F
766 790 0.109342 CTAATGGATCCGGCTTGCCT 59.891 55.000 7.39 0.00 0.00 4.75 F
767 791 0.179020 TAATGGATCCGGCTTGCCTG 60.179 55.000 7.39 3.29 0.00 4.85 F
916 940 0.249657 GACGGGAGCATGATGGTCTC 60.250 60.000 22.11 18.41 43.82 3.36 F
920 944 0.249657 GGAGCATGATGGTCTCGTCC 60.250 60.000 22.11 4.21 43.82 4.79 F
921 945 0.461548 GAGCATGATGGTCTCGTCCA 59.538 55.000 16.70 0.00 41.34 4.02 F
944 968 0.534873 CCCAATTGGCCTAAAACCCG 59.465 55.000 19.75 0.00 0.00 5.28 F
1626 3323 1.267261 CGAGCGGAGAATAGGTGGTAG 59.733 57.143 0.00 0.00 0.00 3.18 F
3228 7146 1.136828 CGGGGAAGACCATGGGATTA 58.863 55.000 18.09 0.00 42.91 1.75 F
4038 7961 2.037902 TCGACCCTGCAAGAAACACATA 59.962 45.455 0.00 0.00 34.07 2.29 F
6142 10570 0.251386 TCGCACCCCAAAGCCAAATA 60.251 50.000 0.00 0.00 0.00 1.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1603 3300 0.744874 CACCTATTCTCCGCTCGGAA 59.255 55.000 12.42 0.0 44.66 4.30 R
1626 3323 1.005340 CAGCTCGCTCTCAAATCCAC 58.995 55.000 0.00 0.0 0.00 4.02 R
2612 4324 3.187637 TCGTTTAAGGTGTATGCTGCAAC 59.812 43.478 6.36 7.2 0.00 4.17 R
2739 4451 5.938125 AGAAACATTGGTGTACATGGTAGAC 59.062 40.000 0.00 0.0 37.67 2.59 R
2740 4452 6.121776 AGAAACATTGGTGTACATGGTAGA 57.878 37.500 0.00 0.0 37.67 2.59 R
2865 4577 7.177392 GCCAATATTCTAAGCCTCATACCATTT 59.823 37.037 0.00 0.0 0.00 2.32 R
3012 6930 6.889177 TCAATATGGTGGAAGAAAGCATGTTA 59.111 34.615 0.00 0.0 36.48 2.41 R
3220 7138 3.928754 TGAGGTAGCAGACTAATCCCAT 58.071 45.455 0.00 0.0 0.00 4.00 R
3904 7827 2.217750 GTGAATGCACCTACACACACA 58.782 47.619 0.00 0.0 39.14 3.72 R
4481 8746 0.036388 TGAACTTGGAGGCGATGACC 60.036 55.000 0.00 0.0 0.00 4.02 R
6241 10690 0.180406 ATTCGGATAAGGCGGTGCTT 59.820 50.000 0.00 0.0 0.00 3.91 R
7196 12912 1.532437 GCTTAAGGTGTTACGCGGTTT 59.468 47.619 12.47 0.0 0.00 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
159 166 9.187455 GTTTATGAAAATTAAACAAGCCGAAGA 57.813 29.630 0.00 0.00 38.71 2.87
164 171 2.806608 TAAACAAGCCGAAGACGAGT 57.193 45.000 0.00 0.00 42.66 4.18
174 181 2.082231 CGAAGACGAGTAGGAGGTTCA 58.918 52.381 0.00 0.00 42.66 3.18
177 184 2.872732 AGACGAGTAGGAGGTTCACAA 58.127 47.619 0.00 0.00 0.00 3.33
185 192 2.281761 AGGTTCACAAGCGCTGGG 60.282 61.111 17.95 12.38 0.00 4.45
338 348 8.754991 TTTCCTTACTTGAAAGGTCACATTTA 57.245 30.769 2.76 0.00 45.37 1.40
380 390 5.072600 TGCCCGTAACTATCCCATAAATCTT 59.927 40.000 0.00 0.00 0.00 2.40
431 441 6.918892 AAAAGGAAACGAAAAAGGGAAATG 57.081 33.333 0.00 0.00 0.00 2.32
509 524 4.634199 ACGGAAAATTCTGGTAGTTCGAA 58.366 39.130 6.90 0.00 37.89 3.71
541 556 4.918037 GCAAAATGCATGAAACCACAAAA 58.082 34.783 0.00 0.00 44.26 2.44
558 573 5.179555 CCACAAAACGAAAAGGAAAAACCAA 59.820 36.000 0.00 0.00 42.04 3.67
588 603 1.243902 CGCCAGCTGGTTTTTCCTTA 58.756 50.000 32.81 0.00 37.57 2.69
590 605 1.960689 GCCAGCTGGTTTTTCCTTACA 59.039 47.619 32.81 0.00 37.57 2.41
594 609 4.340950 CCAGCTGGTTTTTCCTTACAGAAA 59.659 41.667 25.53 0.00 37.07 2.52
617 632 1.369930 CCGCGCGTGACATTTGTTT 60.370 52.632 29.95 0.00 0.00 2.83
621 639 0.927994 CGCGTGACATTTGTTTGCGT 60.928 50.000 0.00 0.00 37.93 5.24
649 667 1.279527 CGAACCGCTTGTTACGAGCA 61.280 55.000 22.61 0.00 40.13 4.26
655 679 1.784525 GCTTGTTACGAGCACTCAGT 58.215 50.000 18.82 0.15 39.89 3.41
680 704 7.063544 GTGCTCGTTAACTAATTGTTCTCTCAT 59.936 37.037 3.71 0.00 39.89 2.90
681 705 8.248253 TGCTCGTTAACTAATTGTTCTCTCATA 58.752 33.333 3.71 0.00 39.89 2.15
682 706 9.250624 GCTCGTTAACTAATTGTTCTCTCATAT 57.749 33.333 3.71 0.00 39.89 1.78
685 709 7.998767 CGTTAACTAATTGTTCTCTCATATGCG 59.001 37.037 3.71 0.00 39.89 4.73
686 710 5.914085 ACTAATTGTTCTCTCATATGCGC 57.086 39.130 0.00 0.00 0.00 6.09
687 711 5.605534 ACTAATTGTTCTCTCATATGCGCT 58.394 37.500 9.73 0.00 0.00 5.92
688 712 6.051717 ACTAATTGTTCTCTCATATGCGCTT 58.948 36.000 9.73 4.59 0.00 4.68
689 713 5.824904 AATTGTTCTCTCATATGCGCTTT 57.175 34.783 9.73 0.00 0.00 3.51
690 714 5.824904 ATTGTTCTCTCATATGCGCTTTT 57.175 34.783 9.73 0.00 0.00 2.27
691 715 5.627499 TTGTTCTCTCATATGCGCTTTTT 57.373 34.783 9.73 0.00 0.00 1.94
692 716 5.221891 TGTTCTCTCATATGCGCTTTTTC 57.778 39.130 9.73 0.00 0.00 2.29
693 717 4.201714 TGTTCTCTCATATGCGCTTTTTCG 60.202 41.667 9.73 0.00 0.00 3.46
694 718 3.521560 TCTCTCATATGCGCTTTTTCGT 58.478 40.909 9.73 0.00 0.00 3.85
695 719 3.932710 TCTCTCATATGCGCTTTTTCGTT 59.067 39.130 9.73 0.00 0.00 3.85
696 720 4.002267 TCTCATATGCGCTTTTTCGTTG 57.998 40.909 9.73 0.00 0.00 4.10
697 721 3.435327 TCTCATATGCGCTTTTTCGTTGT 59.565 39.130 9.73 0.00 0.00 3.32
698 722 3.742786 TCATATGCGCTTTTTCGTTGTC 58.257 40.909 9.73 0.00 0.00 3.18
699 723 2.220315 TATGCGCTTTTTCGTTGTCG 57.780 45.000 9.73 0.00 38.55 4.35
700 724 0.584396 ATGCGCTTTTTCGTTGTCGA 59.416 45.000 9.73 0.00 44.66 4.20
701 725 0.042535 TGCGCTTTTTCGTTGTCGAG 60.043 50.000 9.73 0.00 46.81 4.04
702 726 0.231279 GCGCTTTTTCGTTGTCGAGA 59.769 50.000 0.00 0.00 46.81 4.04
703 727 1.718672 GCGCTTTTTCGTTGTCGAGAG 60.719 52.381 0.00 0.00 46.81 3.20
704 728 1.136611 CGCTTTTTCGTTGTCGAGAGG 60.137 52.381 0.00 0.00 46.81 3.69
705 729 1.194772 GCTTTTTCGTTGTCGAGAGGG 59.805 52.381 0.00 0.00 46.81 4.30
706 730 1.798813 CTTTTTCGTTGTCGAGAGGGG 59.201 52.381 0.00 0.00 46.81 4.79
707 731 0.601841 TTTTCGTTGTCGAGAGGGGC 60.602 55.000 0.00 0.00 46.81 5.80
708 732 2.758770 TTTCGTTGTCGAGAGGGGCG 62.759 60.000 0.00 0.00 46.81 6.13
709 733 3.744719 CGTTGTCGAGAGGGGCGA 61.745 66.667 0.00 0.00 39.71 5.54
710 734 2.654877 GTTGTCGAGAGGGGCGAA 59.345 61.111 0.00 0.00 39.73 4.70
711 735 1.737008 GTTGTCGAGAGGGGCGAAC 60.737 63.158 0.00 0.00 39.73 3.95
712 736 1.906824 TTGTCGAGAGGGGCGAACT 60.907 57.895 0.00 0.00 39.73 3.01
713 737 0.609957 TTGTCGAGAGGGGCGAACTA 60.610 55.000 0.00 0.00 39.73 2.24
714 738 0.609957 TGTCGAGAGGGGCGAACTAA 60.610 55.000 0.00 0.00 39.73 2.24
715 739 0.179142 GTCGAGAGGGGCGAACTAAC 60.179 60.000 0.00 0.00 39.73 2.34
716 740 1.141234 CGAGAGGGGCGAACTAACC 59.859 63.158 0.00 0.00 0.00 2.85
717 741 1.141234 GAGAGGGGCGAACTAACCG 59.859 63.158 0.00 0.00 0.00 4.44
718 742 1.304713 AGAGGGGCGAACTAACCGA 60.305 57.895 0.00 0.00 0.00 4.69
719 743 1.141234 GAGGGGCGAACTAACCGAG 59.859 63.158 0.00 0.00 0.00 4.63
720 744 1.602327 GAGGGGCGAACTAACCGAGT 61.602 60.000 0.00 0.00 41.56 4.18
721 745 0.323725 AGGGGCGAACTAACCGAGTA 60.324 55.000 0.00 0.00 37.44 2.59
722 746 0.101939 GGGGCGAACTAACCGAGTAG 59.898 60.000 0.00 0.00 37.44 2.57
724 748 1.098050 GGCGAACTAACCGAGTAGGA 58.902 55.000 0.00 0.00 45.00 2.94
725 749 1.680207 GGCGAACTAACCGAGTAGGAT 59.320 52.381 0.00 0.00 45.00 3.24
726 750 2.880890 GGCGAACTAACCGAGTAGGATA 59.119 50.000 0.00 0.00 45.00 2.59
727 751 3.304324 GGCGAACTAACCGAGTAGGATAC 60.304 52.174 0.00 0.00 45.00 2.24
728 752 3.313526 GCGAACTAACCGAGTAGGATACA 59.686 47.826 0.00 0.00 46.26 2.29
729 753 4.787882 GCGAACTAACCGAGTAGGATACAC 60.788 50.000 0.00 0.00 46.26 2.90
730 754 4.260948 CGAACTAACCGAGTAGGATACACC 60.261 50.000 0.00 0.00 46.26 4.16
731 755 4.240881 ACTAACCGAGTAGGATACACCA 57.759 45.455 0.00 0.00 46.26 4.17
732 756 3.950395 ACTAACCGAGTAGGATACACCAC 59.050 47.826 0.00 0.00 46.26 4.16
733 757 1.386533 ACCGAGTAGGATACACCACG 58.613 55.000 0.00 0.00 46.26 4.94
734 758 1.065199 ACCGAGTAGGATACACCACGA 60.065 52.381 0.00 0.00 46.26 4.35
735 759 2.019249 CCGAGTAGGATACACCACGAA 58.981 52.381 0.00 0.00 46.26 3.85
736 760 2.223433 CCGAGTAGGATACACCACGAAC 60.223 54.545 0.00 0.00 46.26 3.95
737 761 2.421073 CGAGTAGGATACACCACGAACA 59.579 50.000 0.00 0.00 46.26 3.18
738 762 3.119743 CGAGTAGGATACACCACGAACAA 60.120 47.826 0.00 0.00 46.26 2.83
739 763 4.616604 CGAGTAGGATACACCACGAACAAA 60.617 45.833 0.00 0.00 46.26 2.83
740 764 4.563061 AGTAGGATACACCACGAACAAAC 58.437 43.478 0.00 0.00 46.26 2.93
741 765 2.774687 AGGATACACCACGAACAAACC 58.225 47.619 0.00 0.00 42.04 3.27
742 766 2.370849 AGGATACACCACGAACAAACCT 59.629 45.455 0.00 0.00 42.04 3.50
743 767 3.579586 AGGATACACCACGAACAAACCTA 59.420 43.478 0.00 0.00 42.04 3.08
744 768 4.040706 AGGATACACCACGAACAAACCTAA 59.959 41.667 0.00 0.00 42.04 2.69
745 769 4.390909 GGATACACCACGAACAAACCTAAG 59.609 45.833 0.00 0.00 38.79 2.18
746 770 1.944709 ACACCACGAACAAACCTAAGC 59.055 47.619 0.00 0.00 0.00 3.09
747 771 1.265905 CACCACGAACAAACCTAAGCC 59.734 52.381 0.00 0.00 0.00 4.35
748 772 1.142262 ACCACGAACAAACCTAAGCCT 59.858 47.619 0.00 0.00 0.00 4.58
749 773 2.369532 ACCACGAACAAACCTAAGCCTA 59.630 45.455 0.00 0.00 0.00 3.93
750 774 3.181452 ACCACGAACAAACCTAAGCCTAA 60.181 43.478 0.00 0.00 0.00 2.69
751 775 4.007659 CCACGAACAAACCTAAGCCTAAT 58.992 43.478 0.00 0.00 0.00 1.73
752 776 4.142687 CCACGAACAAACCTAAGCCTAATG 60.143 45.833 0.00 0.00 0.00 1.90
753 777 4.007659 ACGAACAAACCTAAGCCTAATGG 58.992 43.478 0.00 0.00 0.00 3.16
754 778 4.258543 CGAACAAACCTAAGCCTAATGGA 58.741 43.478 0.00 0.00 34.57 3.41
755 779 4.881850 CGAACAAACCTAAGCCTAATGGAT 59.118 41.667 0.00 0.00 34.57 3.41
756 780 5.007724 CGAACAAACCTAAGCCTAATGGATC 59.992 44.000 0.00 0.00 34.57 3.36
757 781 4.793201 ACAAACCTAAGCCTAATGGATCC 58.207 43.478 4.20 4.20 34.57 3.36
758 782 3.771577 AACCTAAGCCTAATGGATCCG 57.228 47.619 7.39 0.00 34.57 4.18
759 783 1.978580 ACCTAAGCCTAATGGATCCGG 59.021 52.381 7.39 2.89 34.57 5.14
760 784 1.339151 CCTAAGCCTAATGGATCCGGC 60.339 57.143 18.01 18.01 42.79 6.13
763 787 2.633860 GCCTAATGGATCCGGCTTG 58.366 57.895 18.31 3.95 39.42 4.01
764 788 1.518903 GCCTAATGGATCCGGCTTGC 61.519 60.000 18.31 9.79 39.42 4.01
765 789 0.890996 CCTAATGGATCCGGCTTGCC 60.891 60.000 7.39 0.75 34.57 4.52
766 790 0.109342 CTAATGGATCCGGCTTGCCT 59.891 55.000 7.39 0.00 0.00 4.75
767 791 0.179020 TAATGGATCCGGCTTGCCTG 60.179 55.000 7.39 3.29 0.00 4.85
768 792 4.802051 TGGATCCGGCTTGCCTGC 62.802 66.667 7.39 0.00 0.00 4.85
769 793 4.496336 GGATCCGGCTTGCCTGCT 62.496 66.667 10.12 0.00 0.00 4.24
770 794 2.899339 GATCCGGCTTGCCTGCTC 60.899 66.667 10.12 0.76 0.00 4.26
771 795 4.496336 ATCCGGCTTGCCTGCTCC 62.496 66.667 10.12 0.00 0.00 4.70
775 799 3.726144 GGCTTGCCTGCTCCCTCT 61.726 66.667 4.11 0.00 0.00 3.69
776 800 2.124778 GCTTGCCTGCTCCCTCTC 60.125 66.667 0.00 0.00 0.00 3.20
777 801 2.588989 CTTGCCTGCTCCCTCTCC 59.411 66.667 0.00 0.00 0.00 3.71
778 802 3.382803 CTTGCCTGCTCCCTCTCCG 62.383 68.421 0.00 0.00 0.00 4.63
779 803 4.704103 TGCCTGCTCCCTCTCCGT 62.704 66.667 0.00 0.00 0.00 4.69
780 804 4.154347 GCCTGCTCCCTCTCCGTG 62.154 72.222 0.00 0.00 0.00 4.94
781 805 4.154347 CCTGCTCCCTCTCCGTGC 62.154 72.222 0.00 0.00 0.00 5.34
782 806 3.073735 CTGCTCCCTCTCCGTGCT 61.074 66.667 0.00 0.00 0.00 4.40
783 807 3.071206 TGCTCCCTCTCCGTGCTC 61.071 66.667 0.00 0.00 0.00 4.26
784 808 3.844090 GCTCCCTCTCCGTGCTCC 61.844 72.222 0.00 0.00 0.00 4.70
785 809 3.151022 CTCCCTCTCCGTGCTCCC 61.151 72.222 0.00 0.00 0.00 4.30
786 810 3.965026 CTCCCTCTCCGTGCTCCCA 62.965 68.421 0.00 0.00 0.00 4.37
787 811 3.775654 CCCTCTCCGTGCTCCCAC 61.776 72.222 0.00 0.00 38.62 4.61
788 812 2.681778 CCTCTCCGTGCTCCCACT 60.682 66.667 0.00 0.00 39.86 4.00
789 813 2.286523 CCTCTCCGTGCTCCCACTT 61.287 63.158 0.00 0.00 39.86 3.16
790 814 0.970937 CCTCTCCGTGCTCCCACTTA 60.971 60.000 0.00 0.00 39.86 2.24
791 815 0.895530 CTCTCCGTGCTCCCACTTAA 59.104 55.000 0.00 0.00 39.86 1.85
792 816 1.482593 CTCTCCGTGCTCCCACTTAAT 59.517 52.381 0.00 0.00 39.86 1.40
793 817 1.480954 TCTCCGTGCTCCCACTTAATC 59.519 52.381 0.00 0.00 39.86 1.75
794 818 0.539986 TCCGTGCTCCCACTTAATCC 59.460 55.000 0.00 0.00 39.86 3.01
795 819 0.541863 CCGTGCTCCCACTTAATCCT 59.458 55.000 0.00 0.00 39.86 3.24
796 820 1.760613 CCGTGCTCCCACTTAATCCTA 59.239 52.381 0.00 0.00 39.86 2.94
797 821 2.483188 CCGTGCTCCCACTTAATCCTAC 60.483 54.545 0.00 0.00 39.86 3.18
798 822 2.798499 CGTGCTCCCACTTAATCCTACG 60.798 54.545 0.00 0.00 39.86 3.51
799 823 2.167900 GTGCTCCCACTTAATCCTACGT 59.832 50.000 0.00 0.00 38.93 3.57
800 824 2.429610 TGCTCCCACTTAATCCTACGTC 59.570 50.000 0.00 0.00 0.00 4.34
801 825 2.694109 GCTCCCACTTAATCCTACGTCT 59.306 50.000 0.00 0.00 0.00 4.18
802 826 3.491104 GCTCCCACTTAATCCTACGTCTG 60.491 52.174 0.00 0.00 0.00 3.51
803 827 3.700038 CTCCCACTTAATCCTACGTCTGT 59.300 47.826 0.00 0.00 0.00 3.41
804 828 3.698040 TCCCACTTAATCCTACGTCTGTC 59.302 47.826 0.00 0.00 0.00 3.51
805 829 3.700038 CCCACTTAATCCTACGTCTGTCT 59.300 47.826 0.00 0.00 0.00 3.41
806 830 4.159879 CCCACTTAATCCTACGTCTGTCTT 59.840 45.833 0.00 0.00 0.00 3.01
807 831 5.337330 CCCACTTAATCCTACGTCTGTCTTT 60.337 44.000 0.00 0.00 0.00 2.52
808 832 6.164176 CCACTTAATCCTACGTCTGTCTTTT 58.836 40.000 0.00 0.00 0.00 2.27
809 833 6.649557 CCACTTAATCCTACGTCTGTCTTTTT 59.350 38.462 0.00 0.00 0.00 1.94
838 862 9.632638 TTTTTCTAATCTAATCATCTTCCCCTG 57.367 33.333 0.00 0.00 0.00 4.45
839 863 8.567198 TTTCTAATCTAATCATCTTCCCCTGA 57.433 34.615 0.00 0.00 0.00 3.86
840 864 8.748179 TTCTAATCTAATCATCTTCCCCTGAT 57.252 34.615 0.00 0.00 33.59 2.90
841 865 8.143673 TCTAATCTAATCATCTTCCCCTGATG 57.856 38.462 0.00 0.00 41.75 3.07
850 874 7.886629 TCATCTTCCCCTGATGATTTTAAAG 57.113 36.000 2.72 0.00 43.47 1.85
851 875 6.835488 TCATCTTCCCCTGATGATTTTAAAGG 59.165 38.462 2.72 0.00 43.47 3.11
852 876 5.518865 TCTTCCCCTGATGATTTTAAAGGG 58.481 41.667 0.00 0.00 46.19 3.95
857 881 6.715347 CCCTGATGATTTTAAAGGGGTAAG 57.285 41.667 0.00 0.00 43.40 2.34
858 882 5.598417 CCCTGATGATTTTAAAGGGGTAAGG 59.402 44.000 0.00 0.17 43.40 2.69
859 883 6.194967 CCTGATGATTTTAAAGGGGTAAGGT 58.805 40.000 0.00 0.00 0.00 3.50
860 884 6.321435 CCTGATGATTTTAAAGGGGTAAGGTC 59.679 42.308 0.00 0.00 0.00 3.85
861 885 6.795590 TGATGATTTTAAAGGGGTAAGGTCA 58.204 36.000 0.00 0.00 0.00 4.02
862 886 6.889722 TGATGATTTTAAAGGGGTAAGGTCAG 59.110 38.462 0.00 0.00 0.00 3.51
863 887 6.457159 TGATTTTAAAGGGGTAAGGTCAGA 57.543 37.500 0.00 0.00 0.00 3.27
864 888 6.243148 TGATTTTAAAGGGGTAAGGTCAGAC 58.757 40.000 0.00 0.00 0.00 3.51
865 889 4.645863 TTTAAAGGGGTAAGGTCAGACC 57.354 45.455 12.25 12.25 38.99 3.85
895 919 8.649973 TTTGTTTTAATTAAATCAAGGCACGT 57.350 26.923 23.53 0.00 36.68 4.49
896 920 9.745880 TTTGTTTTAATTAAATCAAGGCACGTA 57.254 25.926 23.53 12.04 36.68 3.57
897 921 8.958175 TGTTTTAATTAAATCAAGGCACGTAG 57.042 30.769 15.95 0.00 0.00 3.51
898 922 8.784994 TGTTTTAATTAAATCAAGGCACGTAGA 58.215 29.630 15.95 0.00 0.00 2.59
899 923 9.058424 GTTTTAATTAAATCAAGGCACGTAGAC 57.942 33.333 11.33 0.00 0.00 2.59
900 924 5.464965 AATTAAATCAAGGCACGTAGACG 57.535 39.130 0.00 0.00 46.33 4.18
901 925 1.722011 AAATCAAGGCACGTAGACGG 58.278 50.000 7.04 0.00 44.95 4.79
909 933 4.331622 ACGTAGACGGGAGCATGA 57.668 55.556 7.04 0.00 44.95 3.07
910 934 2.808598 ACGTAGACGGGAGCATGAT 58.191 52.632 7.04 0.00 44.95 2.45
911 935 0.385751 ACGTAGACGGGAGCATGATG 59.614 55.000 7.04 0.00 44.95 3.07
912 936 0.319040 CGTAGACGGGAGCATGATGG 60.319 60.000 0.00 0.00 35.37 3.51
913 937 0.753262 GTAGACGGGAGCATGATGGT 59.247 55.000 0.00 0.00 0.00 3.55
914 938 1.040646 TAGACGGGAGCATGATGGTC 58.959 55.000 15.79 15.79 43.63 4.02
915 939 0.689080 AGACGGGAGCATGATGGTCT 60.689 55.000 22.11 9.59 43.82 3.85
916 940 0.249657 GACGGGAGCATGATGGTCTC 60.250 60.000 22.11 18.41 43.82 3.36
917 941 4.766970 GGGAGCATGATGGTCTCG 57.233 61.111 22.11 0.00 43.82 4.04
918 942 1.826024 GGGAGCATGATGGTCTCGT 59.174 57.895 22.11 0.00 43.82 4.18
919 943 0.249657 GGGAGCATGATGGTCTCGTC 60.250 60.000 22.11 7.24 43.82 4.20
920 944 0.249657 GGAGCATGATGGTCTCGTCC 60.250 60.000 22.11 4.21 43.82 4.79
921 945 0.461548 GAGCATGATGGTCTCGTCCA 59.538 55.000 16.70 0.00 41.34 4.02
922 946 0.904649 AGCATGATGGTCTCGTCCAA 59.095 50.000 0.00 0.00 41.09 3.53
944 968 0.534873 CCCAATTGGCCTAAAACCCG 59.465 55.000 19.75 0.00 0.00 5.28
975 999 4.675303 TCCCCCACTCCACCCCAG 62.675 72.222 0.00 0.00 0.00 4.45
976 1000 4.675303 CCCCCACTCCACCCCAGA 62.675 72.222 0.00 0.00 0.00 3.86
977 1001 2.286425 CCCCACTCCACCCCAGAT 60.286 66.667 0.00 0.00 0.00 2.90
978 1002 2.378634 CCCCACTCCACCCCAGATC 61.379 68.421 0.00 0.00 0.00 2.75
979 1003 2.378634 CCCACTCCACCCCAGATCC 61.379 68.421 0.00 0.00 0.00 3.36
980 1004 2.378634 CCACTCCACCCCAGATCCC 61.379 68.421 0.00 0.00 0.00 3.85
981 1005 2.042930 ACTCCACCCCAGATCCCC 59.957 66.667 0.00 0.00 0.00 4.81
982 1006 2.042762 CTCCACCCCAGATCCCCA 59.957 66.667 0.00 0.00 0.00 4.96
1032 1057 2.167861 GCATCACGCTTCCTCCGAC 61.168 63.158 0.00 0.00 37.77 4.79
1109 1134 2.743928 GCGAGGAACCTGGTGCTG 60.744 66.667 4.46 0.00 0.00 4.41
1112 1137 3.240134 GAGGAACCTGGTGCTGCGA 62.240 63.158 4.46 0.00 0.00 5.10
1324 1349 4.767892 CCCCCTCCAAGCCCTCCT 62.768 72.222 0.00 0.00 0.00 3.69
1388 1413 1.273327 GATGCCCAGTGTTCCCTTTTG 59.727 52.381 0.00 0.00 0.00 2.44
1393 1418 3.323691 GCCCAGTGTTCCCTTTTGTTTAT 59.676 43.478 0.00 0.00 0.00 1.40
1403 1428 9.974980 TGTTCCCTTTTGTTTATCATTTCTTAC 57.025 29.630 0.00 0.00 0.00 2.34
1455 1480 2.853731 TCGGCGTTGTTTCAAATGTT 57.146 40.000 6.85 0.00 0.00 2.71
1456 1481 2.455032 TCGGCGTTGTTTCAAATGTTG 58.545 42.857 6.85 0.00 0.00 3.33
1457 1482 2.097629 TCGGCGTTGTTTCAAATGTTGA 59.902 40.909 6.85 0.00 38.04 3.18
1458 1483 2.215363 CGGCGTTGTTTCAAATGTTGAC 59.785 45.455 0.00 0.00 39.87 3.18
1459 1484 3.182967 GGCGTTGTTTCAAATGTTGACA 58.817 40.909 0.00 0.00 39.87 3.58
1460 1485 3.801594 GGCGTTGTTTCAAATGTTGACAT 59.198 39.130 0.00 0.00 39.87 3.06
1461 1486 4.317980 GGCGTTGTTTCAAATGTTGACATG 60.318 41.667 0.00 0.00 39.87 3.21
1462 1487 4.267452 GCGTTGTTTCAAATGTTGACATGT 59.733 37.500 0.00 0.00 39.87 3.21
1490 1515 4.559704 CGCTGTTGGTTAGATAGATCTCCC 60.560 50.000 0.00 0.00 38.32 4.30
1491 1516 4.262678 GCTGTTGGTTAGATAGATCTCCCC 60.263 50.000 0.00 0.00 38.32 4.81
1494 1519 4.405756 TGGTTAGATAGATCTCCCCTCC 57.594 50.000 0.00 0.00 38.32 4.30
1578 3275 1.594293 CCCGTGCAGAAACTCGTGT 60.594 57.895 0.00 0.00 0.00 4.49
1579 3276 1.564622 CCGTGCAGAAACTCGTGTG 59.435 57.895 0.00 0.00 0.00 3.82
1590 3287 6.196724 GCAGAAACTCGTGTGTACATCTATAC 59.803 42.308 0.00 0.00 0.00 1.47
1626 3323 1.267261 CGAGCGGAGAATAGGTGGTAG 59.733 57.143 0.00 0.00 0.00 3.18
1732 3429 4.622740 GCCCAGAATCTTGTTGAATTTTCG 59.377 41.667 0.00 0.00 0.00 3.46
1769 3466 3.340814 TTTCACTCCTGCTCTTCCATC 57.659 47.619 0.00 0.00 0.00 3.51
1936 3633 7.012894 CCATCCATCCGTAGTTTTTGCTTTATA 59.987 37.037 0.00 0.00 0.00 0.98
1988 3685 3.916761 TGCAAGCATAGCAAGGAAAAAG 58.083 40.909 0.00 0.00 39.39 2.27
2006 3703 4.822685 AAAGCAGTGAGTGATCATCTCT 57.177 40.909 19.39 12.34 33.59 3.10
2007 3704 4.389890 AAGCAGTGAGTGATCATCTCTC 57.610 45.455 19.39 9.44 37.48 3.20
2163 3863 2.978978 TGAAACAGAGGTGATCCCTTGA 59.021 45.455 4.47 0.00 46.51 3.02
2226 3926 8.103305 AGATTGCTCTTGGATTTGTCTTAGTTA 58.897 33.333 0.00 0.00 0.00 2.24
2397 4106 5.182950 ACGTCCAGAGATCTTGCTCTATATG 59.817 44.000 0.00 0.00 43.15 1.78
2476 4188 8.970859 TGGGAAATAAAATCTCTGAGATCTTC 57.029 34.615 19.78 15.44 32.89 2.87
2477 4189 7.712639 TGGGAAATAAAATCTCTGAGATCTTCG 59.287 37.037 19.78 0.00 32.89 3.79
2531 4243 8.999431 TGAGTATCCAATAACACAAAAGAGAAC 58.001 33.333 0.00 0.00 0.00 3.01
2600 4312 6.366332 CCTCTTGACAATGTTAGTAGACACAC 59.634 42.308 0.00 0.00 31.30 3.82
2612 4324 1.888215 AGACACACTGCTCACAATGG 58.112 50.000 0.00 0.00 0.00 3.16
2740 4452 7.886629 ACATAATAGCCATGTCAAGAAATGT 57.113 32.000 0.00 0.00 30.82 2.71
2839 4551 2.440539 AGCAGGACAGTTACGACTTG 57.559 50.000 0.00 0.00 32.54 3.16
2982 6900 6.374333 TCAAACAACACCCTTAGATATGAAGC 59.626 38.462 0.00 0.00 0.00 3.86
3038 6956 5.359009 ACATGCTTTCTTCCACCATATTGAG 59.641 40.000 0.00 0.00 0.00 3.02
3137 7055 5.252547 TGCTAGCACCAATATCTGAAACAA 58.747 37.500 14.93 0.00 0.00 2.83
3227 7145 1.922821 CGGGGAAGACCATGGGATT 59.077 57.895 18.09 10.20 42.91 3.01
3228 7146 1.136828 CGGGGAAGACCATGGGATTA 58.863 55.000 18.09 0.00 42.91 1.75
3233 7151 3.181450 GGGAAGACCATGGGATTAGTCTG 60.181 52.174 18.09 0.00 39.47 3.51
3517 7435 6.823182 CACACATGAAGGGAATCAATACACTA 59.177 38.462 0.00 0.00 32.06 2.74
3609 7527 4.882671 ACAGCGTAAATCAACCATGATC 57.117 40.909 0.00 0.00 45.60 2.92
3644 7562 4.241590 TGTATTGGTCAGCTTGCAAAAG 57.758 40.909 0.00 0.00 0.00 2.27
3679 7597 6.852858 TCGTGAACAAACAACAGATAATGA 57.147 33.333 0.00 0.00 0.00 2.57
3702 7620 8.175925 TGACAACAATGAAATGATTAGGACAA 57.824 30.769 0.00 0.00 0.00 3.18
3753 7673 6.881065 TGCATGATAGCAAGAGTCTAAAACTT 59.119 34.615 0.00 0.00 42.46 2.66
3754 7674 7.391554 TGCATGATAGCAAGAGTCTAAAACTTT 59.608 33.333 0.00 0.00 42.46 2.66
3787 7707 5.657474 TGATGTCTTTACCTAATCACGACC 58.343 41.667 0.00 0.00 0.00 4.79
3805 7725 7.663827 TCACGACCCGTCTATTTTCATATAAT 58.336 34.615 0.00 0.00 38.32 1.28
3839 7759 4.202315 ACAAACACTATGGCAGACTACACA 60.202 41.667 0.00 0.00 0.00 3.72
3886 7809 9.362151 TGGGAACAACAAGTTATCTTTTTAGAT 57.638 29.630 0.00 0.00 41.51 1.98
4038 7961 2.037902 TCGACCCTGCAAGAAACACATA 59.962 45.455 0.00 0.00 34.07 2.29
4077 8002 6.825721 AGAAAACATGCCATTCTAGTTAGAGG 59.174 38.462 6.48 0.00 31.88 3.69
4105 8030 5.984926 GCAAAGTCAGAACAATCCATTTTGA 59.015 36.000 0.00 0.00 0.00 2.69
4126 8051 4.159321 TGAAACAAACTGTCAGCAATGGAA 59.841 37.500 0.00 0.00 0.00 3.53
4137 8065 7.335422 ACTGTCAGCAATGGAATACTTCTTAAG 59.665 37.037 0.00 0.00 0.00 1.85
4229 8158 6.176896 TGTGGCAGCATATAGTGTTTCTAAA 58.823 36.000 0.00 0.00 31.94 1.85
4233 8162 8.748412 TGGCAGCATATAGTGTTTCTAAATTTT 58.252 29.630 0.00 0.00 31.94 1.82
4279 8208 7.743520 TTTGTGAATGTTTCTAACGAAAACC 57.256 32.000 0.00 0.00 40.57 3.27
4280 8209 5.503498 TGTGAATGTTTCTAACGAAAACCG 58.497 37.500 0.00 0.00 40.57 4.44
4286 8215 6.616774 TGTTTCTAACGAAAACCGGTTTAT 57.383 33.333 31.80 21.13 40.57 1.40
4358 8288 7.801716 AATTGCTATACATGTAACGACCATT 57.198 32.000 10.14 2.24 0.00 3.16
4370 8300 6.367421 TGTAACGACCATTTTCAAAAGATCG 58.633 36.000 10.21 10.21 0.00 3.69
4379 8309 5.697473 TTTTCAAAAGATCGTACATGCCA 57.303 34.783 0.00 0.00 0.00 4.92
4409 8339 5.620206 TCCAAGTACATGACAACTTCACAT 58.380 37.500 0.00 0.00 36.92 3.21
4474 8739 4.696877 TCACCACACATAGCATGAGAAAAG 59.303 41.667 0.00 0.00 0.00 2.27
4481 8746 6.765036 ACACATAGCATGAGAAAAGATACAGG 59.235 38.462 0.00 0.00 0.00 4.00
4494 8759 0.398522 ATACAGGGTCATCGCCTCCA 60.399 55.000 0.00 0.00 0.00 3.86
4498 8763 1.201429 AGGGTCATCGCCTCCAAGTT 61.201 55.000 0.00 0.00 0.00 2.66
4550 8815 2.230992 CAGCAGCCTACTATAGAGCAGG 59.769 54.545 6.78 10.53 0.00 4.85
4551 8816 2.109128 AGCAGCCTACTATAGAGCAGGA 59.891 50.000 7.88 0.00 0.00 3.86
4552 8817 2.491693 GCAGCCTACTATAGAGCAGGAG 59.508 54.545 7.88 0.48 0.00 3.69
4593 8861 3.058160 GGCCAGAGCACGCACAAT 61.058 61.111 0.00 0.00 42.56 2.71
4608 8876 1.153978 CAATGTGTGCGGACATGGC 60.154 57.895 14.45 0.39 36.66 4.40
4658 8926 1.460699 GAAGGGGCAAACTGGAGGT 59.539 57.895 0.00 0.00 0.00 3.85
4691 8959 0.458669 TAAGGAAGGTCGCGGATGAC 59.541 55.000 6.13 0.00 38.17 3.06
4769 9037 4.715523 GCCGCCACTAACCAGCCA 62.716 66.667 0.00 0.00 0.00 4.75
4773 9041 2.662596 CCACTAACCAGCCAGCGA 59.337 61.111 0.00 0.00 0.00 4.93
4777 9045 2.047274 TAACCAGCCAGCGACAGC 60.047 61.111 0.00 0.00 45.58 4.40
4778 9046 3.605749 TAACCAGCCAGCGACAGCC 62.606 63.158 0.00 0.00 46.67 4.85
4818 9092 2.345244 GCGAGGGATGGATGCGAT 59.655 61.111 0.00 0.00 0.00 4.58
4828 9102 2.839486 TGGATGCGATAATGGAGGAC 57.161 50.000 0.00 0.00 0.00 3.85
4829 9103 2.329267 TGGATGCGATAATGGAGGACT 58.671 47.619 0.00 0.00 0.00 3.85
4830 9104 2.705658 TGGATGCGATAATGGAGGACTT 59.294 45.455 0.00 0.00 0.00 3.01
4831 9105 3.244215 TGGATGCGATAATGGAGGACTTC 60.244 47.826 0.00 0.00 0.00 3.01
4833 9107 3.735237 TGCGATAATGGAGGACTTCTC 57.265 47.619 0.00 0.00 41.71 2.87
4834 9108 3.031013 TGCGATAATGGAGGACTTCTCA 58.969 45.455 0.00 0.00 44.19 3.27
4836 9110 3.993081 GCGATAATGGAGGACTTCTCATG 59.007 47.826 0.00 0.00 44.19 3.07
4877 9157 3.327439 AGGAAACATATGTAGGAGGGGG 58.673 50.000 9.21 0.00 0.00 5.40
4892 9172 0.471022 GGGGGAGAGCCTAGAAGGAG 60.471 65.000 0.00 0.00 37.67 3.69
4989 9269 6.922957 CAGCAGTAAATTCCAAAAGCAGTAAA 59.077 34.615 0.00 0.00 0.00 2.01
4992 9272 8.773645 GCAGTAAATTCCAAAAGCAGTAAAAAT 58.226 29.630 0.00 0.00 0.00 1.82
5025 9305 9.482627 AAAACAGAAAAATCAAACTTGTACACA 57.517 25.926 0.00 0.00 0.00 3.72
5054 9334 2.282180 GGAGAGCCAACGCCCAAA 60.282 61.111 0.00 0.00 34.57 3.28
5055 9335 2.626780 GGAGAGCCAACGCCCAAAC 61.627 63.158 0.00 0.00 34.57 2.93
5069 9349 2.754186 GCCCAAACCTATGGATGCTCAT 60.754 50.000 0.00 0.00 43.54 2.90
5087 9367 2.824936 TCATGAGGAGCTCTAGCATAGC 59.175 50.000 14.64 0.00 45.16 2.97
5100 9380 8.816894 AGCTCTAGCATAGCCACTTTAATTATA 58.183 33.333 4.54 0.00 45.16 0.98
5130 9430 5.504665 GCATCCGAGTTTGTATGGATTTGAG 60.505 44.000 0.00 0.00 39.16 3.02
5132 9432 5.989477 TCCGAGTTTGTATGGATTTGAGAT 58.011 37.500 0.00 0.00 0.00 2.75
5254 9555 7.305474 CCTTTTTATTAGTGCGTTCTTGTCAT 58.695 34.615 0.00 0.00 0.00 3.06
5386 9771 7.903431 GGTGATTACTGTTTAGAGTTAATTGCG 59.097 37.037 0.00 0.00 0.00 4.85
5484 9869 0.529773 GCCATCCTCGCGACAACATA 60.530 55.000 3.71 0.00 0.00 2.29
5499 9884 6.670452 GCGACAACATAAATTGCCATGAAAAG 60.670 38.462 0.00 0.00 32.47 2.27
5500 9885 6.365789 CGACAACATAAATTGCCATGAAAAGT 59.634 34.615 0.00 0.00 32.47 2.66
5501 9886 7.095691 CGACAACATAAATTGCCATGAAAAGTT 60.096 33.333 0.00 0.00 32.47 2.66
5590 10011 3.654414 CTGGTGTTCTCTGTGACCTAAC 58.346 50.000 0.00 0.00 0.00 2.34
5610 10031 7.039504 ACCTAACTCGAACTAGGTCATGTAAAA 60.040 37.037 16.07 0.00 43.69 1.52
5621 10042 8.906867 ACTAGGTCATGTAAAATGATTGGATTG 58.093 33.333 0.00 0.00 0.00 2.67
5641 10062 8.246871 TGGATTGCAAACGAATAATATGTTTCA 58.753 29.630 1.71 0.00 33.80 2.69
5695 10116 5.047377 GGGAACAGAAAACCATTCATAGCAA 60.047 40.000 0.00 0.00 0.00 3.91
5707 10128 5.338219 CCATTCATAGCAACCCAATTTTCCA 60.338 40.000 0.00 0.00 0.00 3.53
5762 10183 1.867233 GCGCTAGCTAGCTTGCATTTA 59.133 47.619 37.78 15.00 46.85 1.40
5987 10415 1.615392 GTGAAAGCAGATGCCCACTTT 59.385 47.619 0.14 0.00 43.38 2.66
6032 10460 2.768253 TGGATGCAGTAGAGGTTGTG 57.232 50.000 0.00 0.00 0.00 3.33
6142 10570 0.251386 TCGCACCCCAAAGCCAAATA 60.251 50.000 0.00 0.00 0.00 1.40
6225 10674 0.474184 CAGTTCCTCTGGGGTTGTGT 59.526 55.000 0.00 0.00 40.23 3.72
6241 10690 4.118410 GTTGTGTGCCATGTTCAATTTCA 58.882 39.130 0.00 0.00 0.00 2.69
6313 10762 2.287909 CCTGTATGGAGTTCTCGCTAGC 60.288 54.545 4.06 4.06 38.35 3.42
6315 10764 3.815962 CTGTATGGAGTTCTCGCTAGCTA 59.184 47.826 13.93 0.00 0.00 3.32
6321 10770 6.216801 TGGAGTTCTCGCTAGCTATTAAAA 57.783 37.500 13.93 0.00 0.00 1.52
6333 10782 7.219154 CGCTAGCTATTAAAAGATCTATGTCCG 59.781 40.741 13.93 0.00 0.00 4.79
6337 10786 6.311690 GCTATTAAAAGATCTATGTCCGGAGC 59.688 42.308 3.06 0.00 0.00 4.70
6364 10814 4.142687 CGGTTGTTTTGAAGACTGAGTTGT 60.143 41.667 0.00 0.00 0.00 3.32
6433 10883 3.063861 TGCGCTGAATGCTTGTAATACAG 59.936 43.478 9.73 0.00 40.11 2.74
6479 10929 5.125356 TGAAGAGTTGCAGAATTCTTGACA 58.875 37.500 4.86 1.76 38.04 3.58
6557 12217 2.826428 ACCAGTGTGCATAAGCTATCG 58.174 47.619 0.00 0.00 42.74 2.92
6564 12224 0.436531 GCATAAGCTATCGACGCTGC 59.563 55.000 11.34 8.27 37.87 5.25
6570 12230 0.721718 GCTATCGACGCTGCACTTTT 59.278 50.000 0.00 0.00 0.00 2.27
6582 12243 1.318576 GCACTTTTACACTGCAGGGT 58.681 50.000 27.48 27.48 0.00 4.34
6590 12251 6.549736 ACTTTTACACTGCAGGGTTTAATTCT 59.450 34.615 29.66 0.99 0.00 2.40
6591 12252 6.569179 TTTACACTGCAGGGTTTAATTCTC 57.431 37.500 29.66 0.00 0.00 2.87
6594 12255 4.520492 ACACTGCAGGGTTTAATTCTCTTG 59.480 41.667 18.08 2.47 0.00 3.02
6599 12260 4.262420 GCAGGGTTTAATTCTCTTGGCAAA 60.262 41.667 0.00 0.00 0.00 3.68
6621 12282 8.874816 GCAAACTTGTAAAAATGTTAGGTGAAA 58.125 29.630 0.00 0.00 0.00 2.69
6645 12306 4.514577 CCTACCCCAGCGTGCTCG 62.515 72.222 3.31 3.31 40.37 5.03
6646 12307 3.449227 CTACCCCAGCGTGCTCGA 61.449 66.667 13.13 0.00 39.71 4.04
6650 12311 4.147449 CCCAGCGTGCTCGATCCA 62.147 66.667 13.13 0.00 39.71 3.41
6652 12313 1.363807 CCAGCGTGCTCGATCCATA 59.636 57.895 13.13 0.00 39.71 2.74
6653 12314 0.037882 CCAGCGTGCTCGATCCATAT 60.038 55.000 13.13 0.00 39.71 1.78
6654 12315 1.344458 CAGCGTGCTCGATCCATATC 58.656 55.000 13.13 0.00 39.71 1.63
6712 12399 9.712305 ATCTATAACACTAAATACATCCACAGC 57.288 33.333 0.00 0.00 0.00 4.40
6713 12400 8.700973 TCTATAACACTAAATACATCCACAGCA 58.299 33.333 0.00 0.00 0.00 4.41
6714 12401 5.880054 AACACTAAATACATCCACAGCAC 57.120 39.130 0.00 0.00 0.00 4.40
6715 12402 4.905429 ACACTAAATACATCCACAGCACA 58.095 39.130 0.00 0.00 0.00 4.57
6716 12403 5.312895 ACACTAAATACATCCACAGCACAA 58.687 37.500 0.00 0.00 0.00 3.33
6717 12404 5.767665 ACACTAAATACATCCACAGCACAAA 59.232 36.000 0.00 0.00 0.00 2.83
6718 12405 6.434028 ACACTAAATACATCCACAGCACAAAT 59.566 34.615 0.00 0.00 0.00 2.32
6719 12406 6.968904 CACTAAATACATCCACAGCACAAATC 59.031 38.462 0.00 0.00 0.00 2.17
6720 12407 6.886459 ACTAAATACATCCACAGCACAAATCT 59.114 34.615 0.00 0.00 0.00 2.40
6721 12408 8.046708 ACTAAATACATCCACAGCACAAATCTA 58.953 33.333 0.00 0.00 0.00 1.98
6722 12409 7.701539 AAATACATCCACAGCACAAATCTAA 57.298 32.000 0.00 0.00 0.00 2.10
6723 12410 6.932356 ATACATCCACAGCACAAATCTAAG 57.068 37.500 0.00 0.00 0.00 2.18
6724 12411 4.910195 ACATCCACAGCACAAATCTAAGA 58.090 39.130 0.00 0.00 0.00 2.10
6725 12412 5.503927 ACATCCACAGCACAAATCTAAGAT 58.496 37.500 0.00 0.00 0.00 2.40
6726 12413 5.587844 ACATCCACAGCACAAATCTAAGATC 59.412 40.000 0.00 0.00 0.00 2.75
6727 12414 5.426689 TCCACAGCACAAATCTAAGATCT 57.573 39.130 0.00 0.00 0.00 2.75
6728 12415 6.544928 TCCACAGCACAAATCTAAGATCTA 57.455 37.500 0.00 0.00 0.00 1.98
6777 12471 9.784531 ACAAATCTAAGACAATATGAATCGGAT 57.215 29.630 0.00 0.00 0.00 4.18
6782 12476 4.573900 AGACAATATGAATCGGATGGAGC 58.426 43.478 0.00 0.00 0.00 4.70
6784 12478 4.914983 ACAATATGAATCGGATGGAGCAT 58.085 39.130 0.00 0.00 0.00 3.79
6842 12557 4.479158 AGAAGTGATTTGGCAAACCCTTA 58.521 39.130 16.00 0.00 33.59 2.69
6844 12559 5.543790 AGAAGTGATTTGGCAAACCCTTATT 59.456 36.000 16.00 5.81 33.59 1.40
6852 12567 2.297880 GGCAAACCCTTATTGAAACGGT 59.702 45.455 0.00 0.00 0.00 4.83
6873 12588 5.010719 CGGTGGGAGTAATAGACACACATAT 59.989 44.000 0.00 0.00 34.34 1.78
7042 12757 7.817478 CCTATATGTGACGGAACATTGCTAATA 59.183 37.037 10.07 2.58 41.09 0.98
7069 12784 2.770164 ACAAAATGGCTAGAGCGAGT 57.230 45.000 0.00 0.00 43.26 4.18
7073 12788 4.141937 ACAAAATGGCTAGAGCGAGTATCA 60.142 41.667 0.00 0.00 43.26 2.15
7090 12805 3.737559 ATCACCAACAGCAGGGATAAA 57.262 42.857 0.00 0.00 0.00 1.40
7125 12841 1.478837 CCATCATTGGGCTCAGCTCAT 60.479 52.381 0.00 0.00 39.47 2.90
7194 12910 7.737972 TGCACAGCAGAGTTAAAATACTTAA 57.262 32.000 0.00 0.00 33.32 1.85
7196 12912 9.443323 TGCACAGCAGAGTTAAAATACTTAATA 57.557 29.630 0.00 0.00 33.32 0.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
159 166 1.272769 GCTTGTGAACCTCCTACTCGT 59.727 52.381 0.00 0.00 0.00 4.18
164 171 0.037326 CAGCGCTTGTGAACCTCCTA 60.037 55.000 7.50 0.00 0.00 2.94
185 192 2.488153 ACTAAATTGAAGAACAGCGCCC 59.512 45.455 2.29 0.00 0.00 6.13
219 226 3.322254 GGTATACACTAGCAGAGGCACAT 59.678 47.826 5.01 0.00 44.61 3.21
220 227 2.693591 GGTATACACTAGCAGAGGCACA 59.306 50.000 5.01 0.00 44.61 4.57
338 348 3.372675 GGGCAGGGACTACCAACATTATT 60.373 47.826 0.00 0.00 45.77 1.40
342 352 1.910580 CGGGCAGGGACTACCAACAT 61.911 60.000 0.00 0.00 45.77 2.71
356 366 4.595781 AGATTTATGGGATAGTTACGGGCA 59.404 41.667 0.00 0.00 0.00 5.36
541 556 4.221041 TGGTTCTTGGTTTTTCCTTTTCGT 59.779 37.500 0.00 0.00 37.07 3.85
606 621 2.308347 CGCTACGCAAACAAATGTCA 57.692 45.000 0.00 0.00 0.00 3.58
649 667 5.539048 ACAATTAGTTAACGAGCACTGAGT 58.461 37.500 0.00 0.00 0.00 3.41
655 679 6.452242 TGAGAGAACAATTAGTTAACGAGCA 58.548 36.000 0.00 0.00 41.51 4.26
668 692 5.824904 AAAAGCGCATATGAGAGAACAAT 57.175 34.783 11.47 0.00 0.00 2.71
680 704 1.793532 TCGACAACGAAAAAGCGCATA 59.206 42.857 11.47 0.00 45.74 3.14
681 705 0.584396 TCGACAACGAAAAAGCGCAT 59.416 45.000 11.47 0.00 45.74 4.73
682 706 2.007549 TCGACAACGAAAAAGCGCA 58.992 47.368 11.47 0.00 45.74 6.09
691 715 3.744719 CGCCCCTCTCGACAACGA 61.745 66.667 0.00 0.00 46.56 3.85
692 716 3.277211 TTCGCCCCTCTCGACAACG 62.277 63.158 0.00 0.00 35.51 4.10
693 717 1.737008 GTTCGCCCCTCTCGACAAC 60.737 63.158 0.00 0.00 35.51 3.32
694 718 0.609957 TAGTTCGCCCCTCTCGACAA 60.610 55.000 0.00 0.00 35.51 3.18
695 719 0.609957 TTAGTTCGCCCCTCTCGACA 60.610 55.000 0.00 0.00 35.51 4.35
696 720 0.179142 GTTAGTTCGCCCCTCTCGAC 60.179 60.000 0.00 0.00 35.51 4.20
697 721 1.318158 GGTTAGTTCGCCCCTCTCGA 61.318 60.000 0.00 0.00 0.00 4.04
698 722 1.141234 GGTTAGTTCGCCCCTCTCG 59.859 63.158 0.00 0.00 0.00 4.04
699 723 1.141234 CGGTTAGTTCGCCCCTCTC 59.859 63.158 0.00 0.00 0.00 3.20
700 724 1.304713 TCGGTTAGTTCGCCCCTCT 60.305 57.895 0.00 0.00 0.00 3.69
701 725 1.141234 CTCGGTTAGTTCGCCCCTC 59.859 63.158 0.00 0.00 0.00 4.30
702 726 0.323725 TACTCGGTTAGTTCGCCCCT 60.324 55.000 0.00 0.00 39.80 4.79
703 727 0.101939 CTACTCGGTTAGTTCGCCCC 59.898 60.000 0.00 0.00 39.80 5.80
704 728 0.101939 CCTACTCGGTTAGTTCGCCC 59.898 60.000 0.00 0.00 39.80 6.13
705 729 1.098050 TCCTACTCGGTTAGTTCGCC 58.902 55.000 0.00 0.00 39.80 5.54
706 730 3.313526 TGTATCCTACTCGGTTAGTTCGC 59.686 47.826 0.00 0.00 39.80 4.70
707 731 4.260948 GGTGTATCCTACTCGGTTAGTTCG 60.261 50.000 0.00 0.00 39.80 3.95
708 732 4.641989 TGGTGTATCCTACTCGGTTAGTTC 59.358 45.833 0.00 0.00 39.80 3.01
709 733 4.400567 GTGGTGTATCCTACTCGGTTAGTT 59.599 45.833 0.00 0.00 39.80 2.24
710 734 3.950395 GTGGTGTATCCTACTCGGTTAGT 59.050 47.826 0.00 0.00 42.62 2.24
711 735 3.003068 CGTGGTGTATCCTACTCGGTTAG 59.997 52.174 0.00 0.00 37.07 2.34
712 736 2.945008 CGTGGTGTATCCTACTCGGTTA 59.055 50.000 0.00 0.00 37.07 2.85
713 737 1.747355 CGTGGTGTATCCTACTCGGTT 59.253 52.381 0.00 0.00 37.07 4.44
714 738 1.065199 TCGTGGTGTATCCTACTCGGT 60.065 52.381 0.00 0.00 37.07 4.69
715 739 1.671979 TCGTGGTGTATCCTACTCGG 58.328 55.000 0.00 0.00 37.07 4.63
716 740 2.421073 TGTTCGTGGTGTATCCTACTCG 59.579 50.000 0.00 0.00 37.07 4.18
717 741 4.445452 TTGTTCGTGGTGTATCCTACTC 57.555 45.455 0.00 0.00 37.07 2.59
718 742 4.562143 GGTTTGTTCGTGGTGTATCCTACT 60.562 45.833 0.00 0.00 37.07 2.57
719 743 3.681417 GGTTTGTTCGTGGTGTATCCTAC 59.319 47.826 0.00 0.00 37.07 3.18
720 744 3.579586 AGGTTTGTTCGTGGTGTATCCTA 59.420 43.478 0.00 0.00 37.07 2.94
721 745 2.370849 AGGTTTGTTCGTGGTGTATCCT 59.629 45.455 0.00 0.00 37.07 3.24
722 746 2.774687 AGGTTTGTTCGTGGTGTATCC 58.225 47.619 0.00 0.00 0.00 2.59
723 747 4.142966 GCTTAGGTTTGTTCGTGGTGTATC 60.143 45.833 0.00 0.00 0.00 2.24
724 748 3.749609 GCTTAGGTTTGTTCGTGGTGTAT 59.250 43.478 0.00 0.00 0.00 2.29
725 749 3.132925 GCTTAGGTTTGTTCGTGGTGTA 58.867 45.455 0.00 0.00 0.00 2.90
726 750 1.944709 GCTTAGGTTTGTTCGTGGTGT 59.055 47.619 0.00 0.00 0.00 4.16
727 751 1.265905 GGCTTAGGTTTGTTCGTGGTG 59.734 52.381 0.00 0.00 0.00 4.17
728 752 1.142262 AGGCTTAGGTTTGTTCGTGGT 59.858 47.619 0.00 0.00 0.00 4.16
729 753 1.892209 AGGCTTAGGTTTGTTCGTGG 58.108 50.000 0.00 0.00 0.00 4.94
730 754 4.142687 CCATTAGGCTTAGGTTTGTTCGTG 60.143 45.833 0.00 0.00 0.00 4.35
731 755 4.007659 CCATTAGGCTTAGGTTTGTTCGT 58.992 43.478 0.00 0.00 0.00 3.85
732 756 4.258543 TCCATTAGGCTTAGGTTTGTTCG 58.741 43.478 0.00 0.00 33.74 3.95
733 757 5.299531 GGATCCATTAGGCTTAGGTTTGTTC 59.700 44.000 6.95 0.00 33.74 3.18
734 758 5.201243 GGATCCATTAGGCTTAGGTTTGTT 58.799 41.667 6.95 0.00 33.74 2.83
735 759 4.686122 CGGATCCATTAGGCTTAGGTTTGT 60.686 45.833 13.41 0.00 33.74 2.83
736 760 3.815401 CGGATCCATTAGGCTTAGGTTTG 59.185 47.826 13.41 0.00 33.74 2.93
737 761 3.181443 CCGGATCCATTAGGCTTAGGTTT 60.181 47.826 13.41 0.00 33.74 3.27
738 762 2.372172 CCGGATCCATTAGGCTTAGGTT 59.628 50.000 13.41 0.00 33.74 3.50
739 763 1.978580 CCGGATCCATTAGGCTTAGGT 59.021 52.381 13.41 0.00 33.74 3.08
740 764 1.339151 GCCGGATCCATTAGGCTTAGG 60.339 57.143 18.31 5.97 45.67 2.69
741 765 2.100605 GCCGGATCCATTAGGCTTAG 57.899 55.000 18.31 0.00 45.67 2.18
746 770 0.890996 GGCAAGCCGGATCCATTAGG 60.891 60.000 13.41 5.76 0.00 2.69
747 771 0.109342 AGGCAAGCCGGATCCATTAG 59.891 55.000 13.41 0.00 41.95 1.73
748 772 0.179020 CAGGCAAGCCGGATCCATTA 60.179 55.000 13.41 0.00 41.95 1.90
749 773 1.454479 CAGGCAAGCCGGATCCATT 60.454 57.895 13.41 0.00 41.95 3.16
750 774 2.194056 CAGGCAAGCCGGATCCAT 59.806 61.111 13.41 0.00 41.95 3.41
751 775 4.802051 GCAGGCAAGCCGGATCCA 62.802 66.667 15.46 0.00 41.95 3.41
752 776 4.496336 AGCAGGCAAGCCGGATCC 62.496 66.667 15.46 0.00 41.95 3.36
753 777 2.899339 GAGCAGGCAAGCCGGATC 60.899 66.667 15.46 14.32 39.23 3.36
754 778 4.496336 GGAGCAGGCAAGCCGGAT 62.496 66.667 15.46 8.74 41.95 4.18
758 782 3.695747 GAGAGGGAGCAGGCAAGCC 62.696 68.421 2.02 2.02 34.23 4.35
759 783 2.124778 GAGAGGGAGCAGGCAAGC 60.125 66.667 0.00 0.00 0.00 4.01
760 784 2.588989 GGAGAGGGAGCAGGCAAG 59.411 66.667 0.00 0.00 0.00 4.01
761 785 3.393970 CGGAGAGGGAGCAGGCAA 61.394 66.667 0.00 0.00 0.00 4.52
762 786 4.704103 ACGGAGAGGGAGCAGGCA 62.704 66.667 0.00 0.00 0.00 4.75
763 787 4.154347 CACGGAGAGGGAGCAGGC 62.154 72.222 0.00 0.00 0.00 4.85
764 788 4.154347 GCACGGAGAGGGAGCAGG 62.154 72.222 0.00 0.00 0.00 4.85
765 789 3.073735 AGCACGGAGAGGGAGCAG 61.074 66.667 0.00 0.00 0.00 4.24
766 790 3.071206 GAGCACGGAGAGGGAGCA 61.071 66.667 0.00 0.00 0.00 4.26
767 791 3.844090 GGAGCACGGAGAGGGAGC 61.844 72.222 0.00 0.00 0.00 4.70
768 792 3.151022 GGGAGCACGGAGAGGGAG 61.151 72.222 0.00 0.00 0.00 4.30
769 793 3.992641 TGGGAGCACGGAGAGGGA 61.993 66.667 0.00 0.00 0.00 4.20
770 794 3.775654 GTGGGAGCACGGAGAGGG 61.776 72.222 0.00 0.00 0.00 4.30
771 795 0.970937 TAAGTGGGAGCACGGAGAGG 60.971 60.000 0.00 0.00 0.00 3.69
772 796 0.895530 TTAAGTGGGAGCACGGAGAG 59.104 55.000 0.00 0.00 0.00 3.20
773 797 1.480954 GATTAAGTGGGAGCACGGAGA 59.519 52.381 0.00 0.00 0.00 3.71
774 798 1.473434 GGATTAAGTGGGAGCACGGAG 60.473 57.143 0.00 0.00 0.00 4.63
775 799 0.539986 GGATTAAGTGGGAGCACGGA 59.460 55.000 0.00 0.00 0.00 4.69
776 800 0.541863 AGGATTAAGTGGGAGCACGG 59.458 55.000 0.00 0.00 0.00 4.94
777 801 2.798499 CGTAGGATTAAGTGGGAGCACG 60.798 54.545 0.00 0.00 0.00 5.34
778 802 2.167900 ACGTAGGATTAAGTGGGAGCAC 59.832 50.000 0.00 0.00 0.00 4.40
779 803 2.429610 GACGTAGGATTAAGTGGGAGCA 59.570 50.000 0.00 0.00 0.00 4.26
780 804 2.694109 AGACGTAGGATTAAGTGGGAGC 59.306 50.000 0.00 0.00 0.00 4.70
781 805 3.700038 ACAGACGTAGGATTAAGTGGGAG 59.300 47.826 0.00 0.00 0.00 4.30
782 806 3.698040 GACAGACGTAGGATTAAGTGGGA 59.302 47.826 0.00 0.00 0.00 4.37
783 807 3.700038 AGACAGACGTAGGATTAAGTGGG 59.300 47.826 0.00 0.00 0.00 4.61
784 808 4.985538 AGACAGACGTAGGATTAAGTGG 57.014 45.455 0.00 0.00 0.00 4.00
785 809 7.653767 AAAAAGACAGACGTAGGATTAAGTG 57.346 36.000 0.00 0.00 0.00 3.16
812 836 9.632638 CAGGGGAAGATGATTAGATTAGAAAAA 57.367 33.333 0.00 0.00 0.00 1.94
813 837 9.003145 TCAGGGGAAGATGATTAGATTAGAAAA 57.997 33.333 0.00 0.00 0.00 2.29
814 838 8.567198 TCAGGGGAAGATGATTAGATTAGAAA 57.433 34.615 0.00 0.00 0.00 2.52
815 839 8.600668 CATCAGGGGAAGATGATTAGATTAGAA 58.399 37.037 0.00 0.00 44.34 2.10
816 840 7.958016 TCATCAGGGGAAGATGATTAGATTAGA 59.042 37.037 2.00 0.00 44.98 2.10
817 841 8.143673 TCATCAGGGGAAGATGATTAGATTAG 57.856 38.462 2.00 0.00 44.98 1.73
827 851 6.041296 CCCTTTAAAATCATCAGGGGAAGATG 59.959 42.308 0.00 0.00 40.71 2.90
828 852 6.138967 CCCTTTAAAATCATCAGGGGAAGAT 58.861 40.000 0.00 0.00 40.71 2.40
829 853 5.518865 CCCTTTAAAATCATCAGGGGAAGA 58.481 41.667 0.00 0.00 40.71 2.87
830 854 5.859205 CCCTTTAAAATCATCAGGGGAAG 57.141 43.478 0.00 0.00 40.71 3.46
834 858 5.598417 CCTTACCCCTTTAAAATCATCAGGG 59.402 44.000 0.00 0.00 43.66 4.45
835 859 6.194967 ACCTTACCCCTTTAAAATCATCAGG 58.805 40.000 0.00 0.00 0.00 3.86
836 860 6.889722 TGACCTTACCCCTTTAAAATCATCAG 59.110 38.462 0.00 0.00 0.00 2.90
837 861 6.795590 TGACCTTACCCCTTTAAAATCATCA 58.204 36.000 0.00 0.00 0.00 3.07
838 862 7.067129 GTCTGACCTTACCCCTTTAAAATCATC 59.933 40.741 0.00 0.00 0.00 2.92
839 863 6.890268 GTCTGACCTTACCCCTTTAAAATCAT 59.110 38.462 0.00 0.00 0.00 2.45
840 864 6.243148 GTCTGACCTTACCCCTTTAAAATCA 58.757 40.000 0.00 0.00 0.00 2.57
841 865 5.651139 GGTCTGACCTTACCCCTTTAAAATC 59.349 44.000 19.53 0.00 34.73 2.17
842 866 5.577100 GGTCTGACCTTACCCCTTTAAAAT 58.423 41.667 19.53 0.00 34.73 1.82
843 867 4.989277 GGTCTGACCTTACCCCTTTAAAA 58.011 43.478 19.53 0.00 34.73 1.52
844 868 4.645863 GGTCTGACCTTACCCCTTTAAA 57.354 45.455 19.53 0.00 34.73 1.52
869 893 9.099454 ACGTGCCTTGATTTAATTAAAACAAAA 57.901 25.926 24.86 15.47 37.45 2.44
870 894 8.649973 ACGTGCCTTGATTTAATTAAAACAAA 57.350 26.923 24.86 13.86 37.45 2.83
871 895 9.400638 CTACGTGCCTTGATTTAATTAAAACAA 57.599 29.630 23.92 23.92 36.18 2.83
872 896 8.784994 TCTACGTGCCTTGATTTAATTAAAACA 58.215 29.630 14.35 14.58 0.00 2.83
873 897 9.058424 GTCTACGTGCCTTGATTTAATTAAAAC 57.942 33.333 14.35 12.23 0.00 2.43
874 898 7.958567 CGTCTACGTGCCTTGATTTAATTAAAA 59.041 33.333 14.35 0.00 34.11 1.52
875 899 7.413219 CCGTCTACGTGCCTTGATTTAATTAAA 60.413 37.037 12.85 12.85 37.74 1.52
876 900 6.036300 CCGTCTACGTGCCTTGATTTAATTAA 59.964 38.462 0.00 0.00 37.74 1.40
877 901 5.521010 CCGTCTACGTGCCTTGATTTAATTA 59.479 40.000 0.00 0.00 37.74 1.40
878 902 4.331717 CCGTCTACGTGCCTTGATTTAATT 59.668 41.667 0.00 0.00 37.74 1.40
879 903 3.869246 CCGTCTACGTGCCTTGATTTAAT 59.131 43.478 0.00 0.00 37.74 1.40
880 904 3.255725 CCGTCTACGTGCCTTGATTTAA 58.744 45.455 0.00 0.00 37.74 1.52
881 905 2.417651 CCCGTCTACGTGCCTTGATTTA 60.418 50.000 0.00 0.00 37.74 1.40
882 906 1.674817 CCCGTCTACGTGCCTTGATTT 60.675 52.381 0.00 0.00 37.74 2.17
883 907 0.108329 CCCGTCTACGTGCCTTGATT 60.108 55.000 0.00 0.00 37.74 2.57
884 908 0.968901 TCCCGTCTACGTGCCTTGAT 60.969 55.000 0.00 0.00 37.74 2.57
885 909 1.592400 CTCCCGTCTACGTGCCTTGA 61.592 60.000 0.00 0.00 37.74 3.02
886 910 1.153823 CTCCCGTCTACGTGCCTTG 60.154 63.158 0.00 0.00 37.74 3.61
887 911 3.003113 GCTCCCGTCTACGTGCCTT 62.003 63.158 0.00 0.00 37.74 4.35
888 912 3.450115 GCTCCCGTCTACGTGCCT 61.450 66.667 0.00 0.00 37.74 4.75
889 913 3.077519 ATGCTCCCGTCTACGTGCC 62.078 63.158 0.00 0.00 37.74 5.01
890 914 1.878522 CATGCTCCCGTCTACGTGC 60.879 63.158 0.00 4.00 37.74 5.34
891 915 0.385751 ATCATGCTCCCGTCTACGTG 59.614 55.000 0.00 0.00 37.74 4.49
892 916 0.385751 CATCATGCTCCCGTCTACGT 59.614 55.000 1.41 0.00 37.74 3.57
893 917 0.319040 CCATCATGCTCCCGTCTACG 60.319 60.000 0.00 0.00 39.44 3.51
894 918 0.753262 ACCATCATGCTCCCGTCTAC 59.247 55.000 0.00 0.00 0.00 2.59
895 919 1.040646 GACCATCATGCTCCCGTCTA 58.959 55.000 0.00 0.00 0.00 2.59
896 920 0.689080 AGACCATCATGCTCCCGTCT 60.689 55.000 0.00 0.00 0.00 4.18
897 921 0.249657 GAGACCATCATGCTCCCGTC 60.250 60.000 0.00 0.00 0.00 4.79
898 922 1.826024 GAGACCATCATGCTCCCGT 59.174 57.895 0.00 0.00 0.00 5.28
899 923 1.300465 CGAGACCATCATGCTCCCG 60.300 63.158 0.00 0.00 0.00 5.14
900 924 0.249657 GACGAGACCATCATGCTCCC 60.250 60.000 0.00 0.00 0.00 4.30
901 925 0.249657 GGACGAGACCATCATGCTCC 60.250 60.000 0.00 0.00 0.00 4.70
902 926 0.461548 TGGACGAGACCATCATGCTC 59.538 55.000 0.00 0.00 34.77 4.26
903 927 0.904649 TTGGACGAGACCATCATGCT 59.095 50.000 0.00 0.00 39.82 3.79
904 928 1.667724 CTTTGGACGAGACCATCATGC 59.332 52.381 0.00 0.00 39.82 4.06
905 929 1.667724 GCTTTGGACGAGACCATCATG 59.332 52.381 0.00 0.00 39.82 3.07
906 930 1.407437 GGCTTTGGACGAGACCATCAT 60.407 52.381 0.00 0.00 39.82 2.45
907 931 0.036388 GGCTTTGGACGAGACCATCA 60.036 55.000 0.00 0.00 39.82 3.07
908 932 0.744771 GGGCTTTGGACGAGACCATC 60.745 60.000 0.00 0.00 42.23 3.51
909 933 1.299976 GGGCTTTGGACGAGACCAT 59.700 57.895 0.00 0.00 42.23 3.55
910 934 2.747686 GGGCTTTGGACGAGACCA 59.252 61.111 0.00 0.00 42.23 4.02
911 935 0.322546 ATTGGGCTTTGGACGAGACC 60.323 55.000 0.00 0.00 43.03 3.85
912 936 1.200020 CAATTGGGCTTTGGACGAGAC 59.800 52.381 0.00 0.00 0.00 3.36
913 937 1.533625 CAATTGGGCTTTGGACGAGA 58.466 50.000 0.00 0.00 0.00 4.04
914 938 0.527565 CCAATTGGGCTTTGGACGAG 59.472 55.000 17.36 0.00 45.35 4.18
915 939 2.652313 CCAATTGGGCTTTGGACGA 58.348 52.632 17.36 0.00 45.35 4.20
944 968 3.855853 GGGAAGAGGAGAGCGGCC 61.856 72.222 0.00 0.00 0.00 6.13
975 999 0.332972 AGTTTTCTGGGCTGGGGATC 59.667 55.000 0.00 0.00 0.00 3.36
976 1000 0.332972 GAGTTTTCTGGGCTGGGGAT 59.667 55.000 0.00 0.00 0.00 3.85
977 1001 0.772124 AGAGTTTTCTGGGCTGGGGA 60.772 55.000 0.00 0.00 30.72 4.81
978 1002 0.322906 GAGAGTTTTCTGGGCTGGGG 60.323 60.000 0.00 0.00 32.53 4.96
979 1003 0.674895 CGAGAGTTTTCTGGGCTGGG 60.675 60.000 0.00 0.00 32.53 4.45
980 1004 1.301677 GCGAGAGTTTTCTGGGCTGG 61.302 60.000 0.00 0.00 32.53 4.85
981 1005 1.301677 GGCGAGAGTTTTCTGGGCTG 61.302 60.000 6.00 0.00 46.64 4.85
982 1006 1.003233 GGCGAGAGTTTTCTGGGCT 60.003 57.895 6.00 0.00 46.64 5.19
1051 1076 1.227674 GGATGGGTGCTTAGCTCCG 60.228 63.158 17.54 0.00 42.37 4.63
1092 1117 2.743928 CAGCACCAGGTTCCTCGC 60.744 66.667 0.00 0.00 0.00 5.03
1093 1118 2.743928 GCAGCACCAGGTTCCTCG 60.744 66.667 0.00 0.00 0.00 4.63
1094 1119 2.743928 CGCAGCACCAGGTTCCTC 60.744 66.667 0.00 0.00 0.00 3.71
1208 1233 4.097361 GACCCCTTGGCGTCCTCC 62.097 72.222 0.00 0.00 33.59 4.30
1324 1349 5.876357 ACTATGGAACTGGTAGCAAGAAAA 58.124 37.500 0.00 0.00 0.00 2.29
1393 1418 9.748708 CCAACAGAAAGAAAATGTAAGAAATGA 57.251 29.630 0.00 0.00 0.00 2.57
1403 1428 5.776744 CTTCCTCCCAACAGAAAGAAAATG 58.223 41.667 0.00 0.00 0.00 2.32
1455 1480 1.870402 CCAACAGCGTACAACATGTCA 59.130 47.619 0.00 0.00 0.00 3.58
1456 1481 1.871039 ACCAACAGCGTACAACATGTC 59.129 47.619 0.00 0.00 0.00 3.06
1457 1482 1.961793 ACCAACAGCGTACAACATGT 58.038 45.000 0.00 0.00 0.00 3.21
1458 1483 3.743911 TCTAACCAACAGCGTACAACATG 59.256 43.478 0.00 0.00 0.00 3.21
1459 1484 3.997762 TCTAACCAACAGCGTACAACAT 58.002 40.909 0.00 0.00 0.00 2.71
1460 1485 3.455990 TCTAACCAACAGCGTACAACA 57.544 42.857 0.00 0.00 0.00 3.33
1461 1486 5.404946 TCTATCTAACCAACAGCGTACAAC 58.595 41.667 0.00 0.00 0.00 3.32
1462 1487 5.648178 TCTATCTAACCAACAGCGTACAA 57.352 39.130 0.00 0.00 0.00 2.41
1556 3253 4.250305 AGTTTCTGCACGGGCGGT 62.250 61.111 19.95 0.00 46.81 5.68
1590 3287 9.582431 TTCTCCGCTCGGAATAATAAATAATAG 57.418 33.333 12.42 0.00 44.66 1.73
1595 3292 7.042335 CCTATTCTCCGCTCGGAATAATAAAT 58.958 38.462 12.42 7.79 44.66 1.40
1596 3293 6.014840 ACCTATTCTCCGCTCGGAATAATAAA 60.015 38.462 12.42 1.50 44.66 1.40
1602 3299 1.341531 CACCTATTCTCCGCTCGGAAT 59.658 52.381 12.42 6.60 44.66 3.01
1603 3300 0.744874 CACCTATTCTCCGCTCGGAA 59.255 55.000 12.42 0.00 44.66 4.30
1604 3301 1.107538 CCACCTATTCTCCGCTCGGA 61.108 60.000 10.84 10.84 42.90 4.55
1605 3302 1.364171 CCACCTATTCTCCGCTCGG 59.636 63.158 1.14 1.14 0.00 4.63
1606 3303 1.267261 CTACCACCTATTCTCCGCTCG 59.733 57.143 0.00 0.00 0.00 5.03
1609 3306 1.068741 CCACTACCACCTATTCTCCGC 59.931 57.143 0.00 0.00 0.00 5.54
1610 3307 2.662866 TCCACTACCACCTATTCTCCG 58.337 52.381 0.00 0.00 0.00 4.63
1611 3308 5.130477 TCAAATCCACTACCACCTATTCTCC 59.870 44.000 0.00 0.00 0.00 3.71
1626 3323 1.005340 CAGCTCGCTCTCAAATCCAC 58.995 55.000 0.00 0.00 0.00 4.02
1732 3429 5.467705 AGTGAAATTGCAATCAGAAGCTTC 58.532 37.500 19.11 19.11 0.00 3.86
1769 3466 3.616956 TTCTTCTGTGGTAGATGCAGG 57.383 47.619 0.00 0.00 34.80 4.85
1810 3507 6.601613 TGCTCTAAGAAGTTCAAGTTGGAAAA 59.398 34.615 5.50 0.00 0.00 2.29
1811 3508 6.038271 GTGCTCTAAGAAGTTCAAGTTGGAAA 59.962 38.462 5.50 0.00 0.00 3.13
1868 3565 8.749026 TTGGGTTTCTACAACATAAACAAGTA 57.251 30.769 0.00 0.00 35.33 2.24
1988 3685 5.512753 TTAGAGAGATGATCACTCACTGC 57.487 43.478 19.47 12.73 36.70 4.40
2016 3713 5.819901 ACTCTTAGGCAAGCAATCAGTAATC 59.180 40.000 0.00 0.00 0.00 1.75
2026 3725 7.466746 AATATTTCAAACTCTTAGGCAAGCA 57.533 32.000 0.00 0.00 0.00 3.91
2087 3787 4.202182 CCTTGGCATTAATCTGGGACATTG 60.202 45.833 0.00 0.00 38.20 2.82
2088 3788 3.962718 CCTTGGCATTAATCTGGGACATT 59.037 43.478 0.00 0.00 38.20 2.71
2116 3816 3.431233 GGTAGTTTGCAAAGTCGTCCTAC 59.569 47.826 22.47 20.67 0.00 3.18
2163 3863 4.074970 GTGTGGTCTTCAGACAATTGGAT 58.925 43.478 10.83 0.00 46.47 3.41
2203 3903 7.121168 CCATAACTAAGACAAATCCAAGAGCAA 59.879 37.037 0.00 0.00 0.00 3.91
2397 4106 5.086104 TCACCTTGGCTAATTCTGTACTC 57.914 43.478 0.00 0.00 0.00 2.59
2476 4188 4.539509 ACAAAGATAGTACTCGAGAGCG 57.460 45.455 21.68 0.00 39.35 5.03
2477 4189 6.847956 TCTACAAAGATAGTACTCGAGAGC 57.152 41.667 21.68 11.07 0.00 4.09
2515 4227 5.471456 CCTGAGCTGTTCTCTTTTGTGTTAT 59.529 40.000 0.00 0.00 42.38 1.89
2518 4230 3.209410 CCTGAGCTGTTCTCTTTTGTGT 58.791 45.455 0.00 0.00 42.38 3.72
2600 4312 3.786809 CTGCAACCATTGTGAGCAG 57.213 52.632 9.33 9.33 43.50 4.24
2612 4324 3.187637 TCGTTTAAGGTGTATGCTGCAAC 59.812 43.478 6.36 7.20 0.00 4.17
2739 4451 5.938125 AGAAACATTGGTGTACATGGTAGAC 59.062 40.000 0.00 0.00 37.67 2.59
2740 4452 6.121776 AGAAACATTGGTGTACATGGTAGA 57.878 37.500 0.00 0.00 37.67 2.59
2865 4577 7.177392 GCCAATATTCTAAGCCTCATACCATTT 59.823 37.037 0.00 0.00 0.00 2.32
3012 6930 6.889177 TCAATATGGTGGAAGAAAGCATGTTA 59.111 34.615 0.00 0.00 36.48 2.41
3220 7138 3.928754 TGAGGTAGCAGACTAATCCCAT 58.071 45.455 0.00 0.00 0.00 4.00
3227 7145 3.969553 ACAGACATGAGGTAGCAGACTA 58.030 45.455 0.00 0.00 0.00 2.59
3228 7146 2.813907 ACAGACATGAGGTAGCAGACT 58.186 47.619 0.00 0.00 0.00 3.24
3233 7151 2.263077 CGACAACAGACATGAGGTAGC 58.737 52.381 0.00 0.00 0.00 3.58
3609 7527 9.248291 GCTGACCAATACAAATTAATGGTAATG 57.752 33.333 0.00 6.51 44.12 1.90
3644 7562 4.402056 TTGTTCACGAAGATAGATCCCC 57.598 45.455 0.00 0.00 0.00 4.81
3706 7624 6.491403 TGCATGTCTCTATAGATCACTAGCAA 59.509 38.462 18.69 10.09 33.30 3.91
3770 7690 3.129988 AGACGGGTCGTGATTAGGTAAAG 59.870 47.826 0.00 0.00 41.37 1.85
3805 7725 8.744568 TGCCATAGTGTTTGTCAATATATCAA 57.255 30.769 0.00 0.00 35.52 2.57
3839 7759 5.321927 CCAAGAACCTGGTTAAAGTGGTAT 58.678 41.667 12.96 0.00 31.82 2.73
3886 7809 7.122501 ACACACACAATCCATGCTATTGAATTA 59.877 33.333 19.93 0.00 37.68 1.40
3898 7821 2.224744 TGCACCTACACACACAATCCAT 60.225 45.455 0.00 0.00 0.00 3.41
3904 7827 2.217750 GTGAATGCACCTACACACACA 58.782 47.619 0.00 0.00 39.14 3.72
4077 8002 5.125100 TGGATTGTTCTGACTTTGCAATC 57.875 39.130 0.00 0.00 42.51 2.67
4105 8030 4.734398 TTCCATTGCTGACAGTTTGTTT 57.266 36.364 3.99 0.00 0.00 2.83
4126 8051 8.058847 TGGTTTGGCATAATCCTTAAGAAGTAT 58.941 33.333 3.36 0.00 0.00 2.12
4137 8065 8.729805 TTAAATTGATTGGTTTGGCATAATCC 57.270 30.769 0.00 0.00 0.00 3.01
4272 8201 3.900388 TGGAACATAAACCGGTTTTCG 57.100 42.857 35.69 27.20 34.23 3.46
4279 8208 6.503589 TCCATTTAGTTGGAACATAAACCG 57.496 37.500 0.00 0.00 42.82 4.44
4358 8288 5.697473 TTGGCATGTACGATCTTTTGAAA 57.303 34.783 0.00 0.00 0.00 2.69
4386 8316 5.029807 TGTGAAGTTGTCATGTACTTGGA 57.970 39.130 12.86 0.00 38.90 3.53
4409 8339 5.244755 TGACTTGCTGCACAACTTCATATA 58.755 37.500 0.00 0.00 33.68 0.86
4417 8347 1.008079 GGCTGACTTGCTGCACAAC 60.008 57.895 0.00 0.00 42.62 3.32
4443 8373 5.119931 TGCTATGTGTGGTGAATTTTGAC 57.880 39.130 0.00 0.00 0.00 3.18
4474 8739 0.318762 GGAGGCGATGACCCTGTATC 59.681 60.000 0.00 0.00 31.41 2.24
4481 8746 0.036388 TGAACTTGGAGGCGATGACC 60.036 55.000 0.00 0.00 0.00 4.02
4494 8759 1.541147 CATGGTTGCATCCGTGAACTT 59.459 47.619 25.76 0.00 44.63 2.66
4498 8763 0.959867 CCACATGGTTGCATCCGTGA 60.960 55.000 33.09 8.66 44.63 4.35
4541 8806 0.762461 GGTGCCTCCTCCTGCTCTAT 60.762 60.000 0.00 0.00 0.00 1.98
4542 8807 1.381872 GGTGCCTCCTCCTGCTCTA 60.382 63.158 0.00 0.00 0.00 2.43
4671 8939 1.134907 GTCATCCGCGACCTTCCTTAA 60.135 52.381 8.23 0.00 0.00 1.85
4672 8940 0.458669 GTCATCCGCGACCTTCCTTA 59.541 55.000 8.23 0.00 0.00 2.69
4709 8977 1.001406 CTCTGTTCTCTCAAAGCCGGT 59.999 52.381 1.90 0.00 0.00 5.28
4711 8979 1.674221 CCCTCTGTTCTCTCAAAGCCG 60.674 57.143 0.00 0.00 0.00 5.52
4717 8985 0.041833 CCCCTCCCTCTGTTCTCTCA 59.958 60.000 0.00 0.00 0.00 3.27
4718 8986 1.334384 GCCCCTCCCTCTGTTCTCTC 61.334 65.000 0.00 0.00 0.00 3.20
4758 9026 1.293498 CTGTCGCTGGCTGGTTAGT 59.707 57.895 0.00 0.00 0.00 2.24
4818 9092 3.430790 CGCACATGAGAAGTCCTCCATTA 60.431 47.826 0.00 0.00 41.25 1.90
4828 9102 1.204704 TCTACCACCGCACATGAGAAG 59.795 52.381 0.00 0.00 0.00 2.85
4829 9103 1.204704 CTCTACCACCGCACATGAGAA 59.795 52.381 0.00 0.00 0.00 2.87
4830 9104 0.817654 CTCTACCACCGCACATGAGA 59.182 55.000 0.00 0.00 0.00 3.27
4831 9105 0.817654 TCTCTACCACCGCACATGAG 59.182 55.000 0.00 0.00 0.00 2.90
4833 9107 1.935873 CAATCTCTACCACCGCACATG 59.064 52.381 0.00 0.00 0.00 3.21
4834 9108 1.831106 TCAATCTCTACCACCGCACAT 59.169 47.619 0.00 0.00 0.00 3.21
4836 9110 1.476891 TCTCAATCTCTACCACCGCAC 59.523 52.381 0.00 0.00 0.00 5.34
4877 9157 3.214328 CAGTCTCTCCTTCTAGGCTCTC 58.786 54.545 0.00 0.00 34.61 3.20
4892 9172 6.814146 ACTCTTCGTTGAAAATATCCAGTCTC 59.186 38.462 0.00 0.00 0.00 3.36
5025 9305 0.326264 GGCTCTCCCTGTGTTGACAT 59.674 55.000 0.00 0.00 0.00 3.06
5054 9334 2.905085 CTCCTCATGAGCATCCATAGGT 59.095 50.000 17.76 0.00 33.47 3.08
5055 9335 3.613494 CTCCTCATGAGCATCCATAGG 57.387 52.381 17.76 1.17 33.47 2.57
5069 9349 1.133356 TGGCTATGCTAGAGCTCCTCA 60.133 52.381 10.93 6.36 42.66 3.86
5087 9367 9.161629 TCGGATGCATACATATAATTAAAGTGG 57.838 33.333 10.18 0.00 36.35 4.00
5100 9380 4.756642 CCATACAAACTCGGATGCATACAT 59.243 41.667 10.18 0.00 39.98 2.29
5130 9430 1.609783 CCAGTGGTTCCTCCCCATC 59.390 63.158 0.00 0.00 33.76 3.51
5132 9432 3.256960 GCCAGTGGTTCCTCCCCA 61.257 66.667 11.74 0.00 34.77 4.96
5158 9458 1.660560 CCTCGGGCATTCTGGCTTTG 61.661 60.000 0.55 0.00 43.20 2.77
5159 9459 1.379044 CCTCGGGCATTCTGGCTTT 60.379 57.895 0.55 0.00 43.20 3.51
5203 9504 6.036408 CACACATGTTATGTCATCGAACTGAT 59.964 38.462 0.00 0.00 42.70 2.90
5254 9555 3.618594 GCGAATCAACAGAAGCATAGTGA 59.381 43.478 0.00 0.00 0.00 3.41
5386 9771 2.162408 GTCAAAATAGGAGGTGCAGTGC 59.838 50.000 8.58 8.58 0.00 4.40
5393 9778 5.941788 ACAACTCAAGTCAAAATAGGAGGT 58.058 37.500 0.00 0.00 0.00 3.85
5451 9836 2.165030 AGGATGGCAAATTTCTTCAGCG 59.835 45.455 0.00 0.00 0.00 5.18
5484 9869 8.923683 CAAAACAAAAACTTTTCATGGCAATTT 58.076 25.926 0.00 0.00 0.00 1.82
5499 9884 2.290367 GAGGGCATGGCAAAACAAAAAC 59.710 45.455 22.06 0.00 0.00 2.43
5500 9885 2.570135 GAGGGCATGGCAAAACAAAAA 58.430 42.857 22.06 0.00 0.00 1.94
5501 9886 1.202746 GGAGGGCATGGCAAAACAAAA 60.203 47.619 22.06 0.00 0.00 2.44
5564 9949 2.035961 GTCACAGAGAACACCAGCTACA 59.964 50.000 0.00 0.00 0.00 2.74
5590 10011 8.331022 CAATCATTTTACATGACCTAGTTCGAG 58.669 37.037 0.00 0.00 0.00 4.04
5610 10031 9.414295 CATATTATTCGTTTGCAATCCAATCAT 57.586 29.630 0.00 0.18 32.49 2.45
5621 10042 8.995906 GTGTAGTGAAACATATTATTCGTTTGC 58.004 33.333 0.00 0.00 41.43 3.68
5672 10093 5.643379 TGCTATGAATGGTTTTCTGTTCC 57.357 39.130 0.00 0.00 0.00 3.62
5695 10116 2.607499 TCACAGCATGGAAAATTGGGT 58.393 42.857 0.00 0.00 43.62 4.51
5707 10128 6.660521 TCTGAAAATTAGATGGTTCACAGCAT 59.339 34.615 0.00 0.00 44.10 3.79
5762 10183 2.555757 GCCAAAGACTCAGAATGCAAGT 59.444 45.455 0.00 0.00 34.76 3.16
5803 10224 2.370189 ACCTCTGCTCTGCTGTAAACTT 59.630 45.455 0.00 0.00 0.00 2.66
5987 10415 4.556697 TGTCTAGGCCAAGATCATCCTTA 58.443 43.478 5.01 0.00 0.00 2.69
6032 10460 4.400567 CCAAATTCCTCTTCCAAGGACATC 59.599 45.833 0.00 0.00 45.20 3.06
6167 10595 3.689649 AGCTTCATGGCGGTAAAAACTAG 59.310 43.478 0.00 0.00 37.29 2.57
6225 10674 3.391965 GTGCTTGAAATTGAACATGGCA 58.608 40.909 0.00 0.00 0.00 4.92
6241 10690 0.180406 ATTCGGATAAGGCGGTGCTT 59.820 50.000 0.00 0.00 0.00 3.91
6305 10754 9.284594 GACATAGATCTTTTAATAGCTAGCGAG 57.715 37.037 9.55 0.64 0.00 5.03
6313 10762 6.814146 GGCTCCGGACATAGATCTTTTAATAG 59.186 42.308 0.00 0.00 0.00 1.73
6315 10764 5.308237 AGGCTCCGGACATAGATCTTTTAAT 59.692 40.000 0.00 0.00 0.00 1.40
6321 10770 1.549037 GGAGGCTCCGGACATAGATCT 60.549 57.143 19.53 0.00 0.00 2.75
6364 10814 7.230309 TCAGTTGGTCATACACAATCAAAATCA 59.770 33.333 0.00 0.00 0.00 2.57
6433 10883 2.671396 ACAAGCAAACGATGATACGACC 59.329 45.455 0.00 0.00 37.03 4.79
6479 10929 1.473080 GGCCAACAGCACACAACATTT 60.473 47.619 0.00 0.00 46.50 2.32
6537 10987 2.430694 TCGATAGCTTATGCACACTGGT 59.569 45.455 0.00 0.00 42.74 4.00
6557 12217 2.300623 CAGTGTAAAAGTGCAGCGTC 57.699 50.000 0.00 0.00 0.00 5.19
6564 12224 5.508200 TTAAACCCTGCAGTGTAAAAGTG 57.492 39.130 13.81 0.00 0.00 3.16
6570 12230 5.499004 AGAGAATTAAACCCTGCAGTGTA 57.501 39.130 13.81 0.00 0.00 2.90
6582 12243 9.877178 TTTTACAAGTTTGCCAAGAGAATTAAA 57.123 25.926 0.00 0.00 0.00 1.52
6590 12251 7.708752 CCTAACATTTTTACAAGTTTGCCAAGA 59.291 33.333 0.00 0.00 0.00 3.02
6591 12252 7.494298 ACCTAACATTTTTACAAGTTTGCCAAG 59.506 33.333 0.00 0.00 0.00 3.61
6594 12255 6.981559 TCACCTAACATTTTTACAAGTTTGCC 59.018 34.615 0.00 0.00 0.00 4.52
6621 12282 0.769247 ACGCTGGGGTAGGAAAAAGT 59.231 50.000 0.00 0.00 0.00 2.66
6631 12292 4.148825 GATCGAGCACGCTGGGGT 62.149 66.667 0.00 0.00 39.58 4.95
6646 12307 9.347240 CCTGTTTTAGATTTGTCAGATATGGAT 57.653 33.333 0.00 0.00 0.00 3.41
6687 12374 8.700973 TGCTGTGGATGTATTTAGTGTTATAGA 58.299 33.333 0.00 0.00 0.00 1.98
6688 12375 8.765219 GTGCTGTGGATGTATTTAGTGTTATAG 58.235 37.037 0.00 0.00 0.00 1.31
6689 12376 8.261522 TGTGCTGTGGATGTATTTAGTGTTATA 58.738 33.333 0.00 0.00 0.00 0.98
6691 12378 6.468543 TGTGCTGTGGATGTATTTAGTGTTA 58.531 36.000 0.00 0.00 0.00 2.41
6692 12379 5.312895 TGTGCTGTGGATGTATTTAGTGTT 58.687 37.500 0.00 0.00 0.00 3.32
6694 12381 5.878332 TTGTGCTGTGGATGTATTTAGTG 57.122 39.130 0.00 0.00 0.00 2.74
6695 12382 6.886459 AGATTTGTGCTGTGGATGTATTTAGT 59.114 34.615 0.00 0.00 0.00 2.24
6696 12383 7.325660 AGATTTGTGCTGTGGATGTATTTAG 57.674 36.000 0.00 0.00 0.00 1.85
6698 12385 7.611467 TCTTAGATTTGTGCTGTGGATGTATTT 59.389 33.333 0.00 0.00 0.00 1.40
6700 12387 6.653020 TCTTAGATTTGTGCTGTGGATGTAT 58.347 36.000 0.00 0.00 0.00 2.29
6701 12388 6.048732 TCTTAGATTTGTGCTGTGGATGTA 57.951 37.500 0.00 0.00 0.00 2.29
6702 12389 4.910195 TCTTAGATTTGTGCTGTGGATGT 58.090 39.130 0.00 0.00 0.00 3.06
6703 12390 5.821470 AGATCTTAGATTTGTGCTGTGGATG 59.179 40.000 0.00 0.00 0.00 3.51
6704 12391 5.999044 AGATCTTAGATTTGTGCTGTGGAT 58.001 37.500 0.00 0.00 0.00 3.41
6705 12392 5.426689 AGATCTTAGATTTGTGCTGTGGA 57.573 39.130 0.00 0.00 0.00 4.02
6706 12393 8.768955 GTTATAGATCTTAGATTTGTGCTGTGG 58.231 37.037 0.00 0.00 0.00 4.17
6707 12394 9.317936 TGTTATAGATCTTAGATTTGTGCTGTG 57.682 33.333 0.00 0.00 0.00 3.66
6708 12395 9.319143 GTGTTATAGATCTTAGATTTGTGCTGT 57.681 33.333 0.00 0.00 0.00 4.40
6709 12396 9.539825 AGTGTTATAGATCTTAGATTTGTGCTG 57.460 33.333 0.00 0.00 0.00 4.41
6728 12415 9.845740 TTGTGCTATGGATGTATTTAGTGTTAT 57.154 29.630 0.00 0.00 0.00 1.89
6749 12436 7.800380 CCGATTCATATTGTCTTAGATTTGTGC 59.200 37.037 0.00 0.00 0.00 4.57
6773 12467 5.505173 AGTGAAAAATAATGCTCCATCCG 57.495 39.130 0.00 0.00 0.00 4.18
6777 12471 8.725405 TTATACGAGTGAAAAATAATGCTCCA 57.275 30.769 0.00 0.00 0.00 3.86
6817 12514 4.058124 GGGTTTGCCAAATCACTTCTTTC 58.942 43.478 2.39 0.00 36.17 2.62
6821 12518 3.751479 AAGGGTTTGCCAAATCACTTC 57.249 42.857 2.39 0.00 36.17 3.01
6842 12557 5.046159 TGTCTATTACTCCCACCGTTTCAAT 60.046 40.000 0.00 0.00 0.00 2.57
6844 12559 3.833650 TGTCTATTACTCCCACCGTTTCA 59.166 43.478 0.00 0.00 0.00 2.69
6852 12567 7.730332 AGATGATATGTGTGTCTATTACTCCCA 59.270 37.037 0.00 0.00 0.00 4.37
6873 12588 8.701895 ACTTTATTTAGTCGGTCCAATAGATGA 58.298 33.333 0.00 0.00 0.00 2.92
7042 12757 6.821665 TCGCTCTAGCCATTTTGTAAATAAGT 59.178 34.615 0.00 0.00 37.91 2.24
7069 12784 4.385199 CCTTTATCCCTGCTGTTGGTGATA 60.385 45.833 0.00 0.00 0.00 2.15
7073 12788 1.616994 GCCTTTATCCCTGCTGTTGGT 60.617 52.381 0.00 0.00 0.00 3.67
7194 12910 3.371898 GCTTAAGGTGTTACGCGGTTTAT 59.628 43.478 12.47 0.00 0.00 1.40
7196 12912 1.532437 GCTTAAGGTGTTACGCGGTTT 59.468 47.619 12.47 0.00 0.00 3.27
7200 12916 1.705256 TCTGCTTAAGGTGTTACGCG 58.295 50.000 3.53 3.53 36.43 6.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.