Multiple sequence alignment - TraesCS4A01G146600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G146600 chr4A 100.000 1514 0 0 1 1514 257352986 257351473 0.000000e+00 2796
1 TraesCS4A01G146600 chr4A 100.000 600 0 0 1830 2429 257351157 257350558 0.000000e+00 1109
2 TraesCS4A01G146600 chr4A 89.349 338 13 9 2115 2429 395581527 395581190 1.050000e-108 403
3 TraesCS4A01G146600 chr4A 88.953 172 12 5 2262 2429 374863315 374863147 3.170000e-49 206
4 TraesCS4A01G146600 chr4A 84.946 186 19 7 2250 2427 385987983 385988167 1.920000e-41 180
5 TraesCS4A01G146600 chr4A 97.222 72 1 1 2066 2137 395581632 395581562 1.180000e-23 121
6 TraesCS4A01G146600 chr1B 90.007 1441 128 9 82 1514 466294003 466292571 0.000000e+00 1849
7 TraesCS4A01G146600 chr1B 88.816 760 69 9 1 745 322992963 322992205 0.000000e+00 918
8 TraesCS4A01G146600 chr1B 83.945 218 29 4 1830 2047 467457935 467458146 1.140000e-48 204
9 TraesCS4A01G146600 chr4B 90.945 508 40 4 244 745 58859608 58859101 0.000000e+00 678
10 TraesCS4A01G146600 chr4B 89.803 304 27 2 1 300 58859908 58859605 1.050000e-103 387
11 TraesCS4A01G146600 chr2A 90.244 328 14 9 2115 2429 174692821 174692499 1.740000e-111 412
12 TraesCS4A01G146600 chr2A 84.545 110 16 1 2004 2112 117025070 117024961 9.180000e-20 108
13 TraesCS4A01G146600 chr5B 87.791 344 17 6 2110 2429 37002898 37003240 1.760000e-101 379
14 TraesCS4A01G146600 chr5B 83.051 236 29 7 1858 2087 79041057 79040827 1.140000e-48 204
15 TraesCS4A01G146600 chr3D 93.004 243 8 4 2110 2350 248943772 248944007 1.790000e-91 346
16 TraesCS4A01G146600 chr5D 85.387 349 14 8 2115 2426 315908837 315909185 6.480000e-86 327
17 TraesCS4A01G146600 chr5D 88.843 242 15 7 2194 2429 204477226 204477461 1.100000e-73 287
18 TraesCS4A01G146600 chr5D 100.000 68 0 0 2070 2137 315908735 315908802 2.540000e-25 126
19 TraesCS4A01G146600 chr5D 96.774 62 2 0 2076 2137 42158264 42158325 1.190000e-18 104
20 TraesCS4A01G146600 chr6D 90.164 244 15 6 2194 2429 156331889 156332131 2.350000e-80 309
21 TraesCS4A01G146600 chr6D 88.980 245 18 4 2194 2429 140606727 140606483 6.570000e-76 294
22 TraesCS4A01G146600 chr6D 93.299 194 9 2 2115 2304 236265415 236265608 1.420000e-72 283
23 TraesCS4A01G146600 chr6D 98.387 62 1 0 2076 2137 162045985 162045924 2.550000e-20 110
24 TraesCS4A01G146600 chr4D 94.388 196 9 2 2110 2304 1713312 1713506 1.410000e-77 300
25 TraesCS4A01G146600 chr4D 98.485 66 1 0 2072 2137 1713205 1713270 1.530000e-22 117
26 TraesCS4A01G146600 chr4D 92.405 79 3 2 2061 2136 447425839 447425917 2.550000e-20 110
27 TraesCS4A01G146600 chr4D 96.774 62 2 0 2076 2137 150861818 150861757 1.190000e-18 104
28 TraesCS4A01G146600 chr2D 88.538 253 12 9 2194 2429 295060903 295060651 8.500000e-75 291
29 TraesCS4A01G146600 chr7D 87.755 245 18 9 2194 2429 404966819 404967060 2.380000e-70 276
30 TraesCS4A01G146600 chr7D 100.000 66 0 0 2072 2137 335757511 335757576 3.280000e-24 122
31 TraesCS4A01G146600 chr6B 90.741 108 9 1 1982 2088 355965655 355965548 2.520000e-30 143
32 TraesCS4A01G146600 chr6A 96.386 83 2 1 2055 2137 204579142 204579223 4.210000e-28 135
33 TraesCS4A01G146600 chr6A 88.889 81 7 1 1982 2062 265972633 265972555 5.530000e-17 99
34 TraesCS4A01G146600 chr6A 84.314 102 14 2 1988 2088 266273491 266273591 5.530000e-17 99
35 TraesCS4A01G146600 chr5A 82.677 127 14 6 1988 2108 163930487 163930363 3.300000e-19 106
36 TraesCS4A01G146600 chr5A 82.540 126 14 6 1988 2107 163929844 163929721 1.190000e-18 104
37 TraesCS4A01G146600 chr2B 88.235 85 8 1 1982 2066 156236402 156236484 1.540000e-17 100


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G146600 chr4A 257350558 257352986 2428 True 1952.5 2796 100.000 1 2429 2 chr4A.!!$R2 2428
1 TraesCS4A01G146600 chr1B 466292571 466294003 1432 True 1849.0 1849 90.007 82 1514 1 chr1B.!!$R2 1432
2 TraesCS4A01G146600 chr1B 322992205 322992963 758 True 918.0 918 88.816 1 745 1 chr1B.!!$R1 744
3 TraesCS4A01G146600 chr4B 58859101 58859908 807 True 532.5 678 90.374 1 745 2 chr4B.!!$R1 744

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
226 232 0.034337 GGGACGCTAACAGAACACCA 59.966 55.0 0.00 0.0 0.00 4.17 F
747 817 0.034767 CTGCATGGAGAGGAAGCCAA 60.035 55.0 8.85 0.0 37.78 4.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1266 1337 0.106868 CCATGCTCTTGAGCCATGGA 60.107 55.0 29.07 12.58 41.53 3.41 R
1943 2014 0.107456 ACCAGACCTGAACTGCACAG 59.893 55.0 0.00 0.00 34.47 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
211 217 6.581166 CACTTTTTCTTTAGCAAATACGGGAC 59.419 38.462 0.00 0.00 0.00 4.46
226 232 0.034337 GGGACGCTAACAGAACACCA 59.966 55.000 0.00 0.00 0.00 4.17
260 266 2.048222 CACCGCACAGATCCACGT 60.048 61.111 0.00 0.00 0.00 4.49
351 411 4.627467 GTGCAAAATTACAACCACACAACA 59.373 37.500 0.00 0.00 0.00 3.33
352 412 5.293079 GTGCAAAATTACAACCACACAACAT 59.707 36.000 0.00 0.00 0.00 2.71
353 413 6.477033 GTGCAAAATTACAACCACACAACATA 59.523 34.615 0.00 0.00 0.00 2.29
354 414 6.477033 TGCAAAATTACAACCACACAACATAC 59.523 34.615 0.00 0.00 0.00 2.39
355 415 6.477033 GCAAAATTACAACCACACAACATACA 59.523 34.615 0.00 0.00 0.00 2.29
356 416 7.515998 GCAAAATTACAACCACACAACATACAC 60.516 37.037 0.00 0.00 0.00 2.90
357 417 6.701145 AATTACAACCACACAACATACACA 57.299 33.333 0.00 0.00 0.00 3.72
358 418 6.892658 ATTACAACCACACAACATACACAT 57.107 33.333 0.00 0.00 0.00 3.21
359 419 6.701145 TTACAACCACACAACATACACATT 57.299 33.333 0.00 0.00 0.00 2.71
360 420 5.590530 ACAACCACACAACATACACATTT 57.409 34.783 0.00 0.00 0.00 2.32
361 421 5.971763 ACAACCACACAACATACACATTTT 58.028 33.333 0.00 0.00 0.00 1.82
464 534 0.737715 GCCTCGATCGAACTGCAACT 60.738 55.000 19.92 0.00 0.00 3.16
476 546 0.798776 CTGCAACTAAGGGACAAGCG 59.201 55.000 0.00 0.00 0.00 4.68
478 548 1.202710 TGCAACTAAGGGACAAGCGAA 60.203 47.619 0.00 0.00 0.00 4.70
479 549 2.084546 GCAACTAAGGGACAAGCGAAT 58.915 47.619 0.00 0.00 0.00 3.34
480 550 3.267483 GCAACTAAGGGACAAGCGAATA 58.733 45.455 0.00 0.00 0.00 1.75
523 593 0.443869 CATTGTCGTCAAAGGGAGCG 59.556 55.000 0.00 0.00 37.11 5.03
529 599 1.896660 GTCAAAGGGAGCGGCAACA 60.897 57.895 1.45 0.00 0.00 3.33
535 605 3.660111 GGAGCGGCAACACACACC 61.660 66.667 1.45 0.00 0.00 4.16
548 618 3.953775 ACACCTCGCCCCAACTGG 61.954 66.667 0.00 0.00 0.00 4.00
552 622 2.671070 CTCGCCCCAACTGGATGT 59.329 61.111 0.00 0.00 37.39 3.06
554 624 2.184020 CTCGCCCCAACTGGATGTCA 62.184 60.000 0.00 0.00 37.39 3.58
578 648 3.727258 CGGATGGACCCCCTTGCA 61.727 66.667 0.00 0.00 34.64 4.08
592 662 3.810687 TTGCACCCCTCCCTCCTGT 62.811 63.158 0.00 0.00 0.00 4.00
612 682 3.687698 TGTAGAATTAAAAGCTCCGCACC 59.312 43.478 0.00 0.00 0.00 5.01
616 686 1.847890 TTAAAAGCTCCGCACCGCAC 61.848 55.000 0.00 0.00 0.00 5.34
650 720 5.244785 ACGCGAACTAAATGAGTATCTCA 57.755 39.130 15.93 1.92 44.99 3.27
747 817 0.034767 CTGCATGGAGAGGAAGCCAA 60.035 55.000 8.85 0.00 37.78 4.52
802 873 0.329596 GCTTCCTGGATCCAGTGGTT 59.670 55.000 34.49 0.00 42.15 3.67
822 893 0.397941 GGAAGATGCGGGATCCATGA 59.602 55.000 15.23 0.00 32.08 3.07
827 898 4.996434 GCGGGATCCATGAGGGCG 62.996 72.222 15.23 7.02 36.21 6.13
844 915 1.954362 GCGAGGAGAGGTGATGCAGT 61.954 60.000 0.00 0.00 0.00 4.40
852 923 1.302752 GGTGATGCAGTGTGGCTCA 60.303 57.895 0.00 0.00 34.04 4.26
861 932 0.250467 AGTGTGGCTCATGTGGTGAC 60.250 55.000 0.00 0.00 32.22 3.67
862 933 0.534877 GTGTGGCTCATGTGGTGACA 60.535 55.000 0.00 0.00 36.22 3.58
895 966 2.359850 GGTGATGCAGTGCGGGAA 60.360 61.111 11.20 0.00 0.00 3.97
909 980 2.586792 GGAAGGGACGAGCATGCT 59.413 61.111 22.92 22.92 0.00 3.79
911 982 1.372087 GGAAGGGACGAGCATGCTTG 61.372 60.000 29.80 29.80 0.00 4.01
961 1032 2.093106 GTAGAAGAAGGTCGAGCAGGA 58.907 52.381 18.15 0.00 0.00 3.86
966 1037 0.820871 GAAGGTCGAGCAGGAGTGAT 59.179 55.000 18.15 0.00 0.00 3.06
975 1046 0.250467 GCAGGAGTGATGGTGTGTGT 60.250 55.000 0.00 0.00 0.00 3.72
979 1050 0.250467 GAGTGATGGTGTGTGTGCCT 60.250 55.000 0.00 0.00 0.00 4.75
982 1053 0.182299 TGATGGTGTGTGTGCCTGAA 59.818 50.000 0.00 0.00 0.00 3.02
991 1062 2.821969 GTGTGTGCCTGAATTGGAGATT 59.178 45.455 0.00 0.00 0.00 2.40
1008 1079 3.312890 AGATTGTTCGGAGATGGAGGAT 58.687 45.455 0.00 0.00 35.04 3.24
1011 1082 0.250081 GTTCGGAGATGGAGGATGCC 60.250 60.000 0.00 0.00 35.04 4.40
1103 1174 4.467084 GCGGGGTGGCTCGATGAA 62.467 66.667 0.00 0.00 0.00 2.57
1104 1175 2.505982 CGGGGTGGCTCGATGAAT 59.494 61.111 0.00 0.00 0.00 2.57
1105 1176 1.595382 CGGGGTGGCTCGATGAATC 60.595 63.158 0.00 0.00 0.00 2.52
1106 1177 1.526887 GGGGTGGCTCGATGAATCA 59.473 57.895 0.00 0.00 0.00 2.57
1175 1246 4.796408 AGGGGTAGAGCTCCACTG 57.204 61.111 10.93 0.00 41.40 3.66
1206 1277 4.179579 GCCGGCGACAATTCAGGC 62.180 66.667 12.58 0.00 37.61 4.85
1255 1326 0.966875 GTGCACCTTGATCCCATGCA 60.967 55.000 5.22 6.87 43.70 3.96
1299 1370 0.767375 GCATGGGGAAGGATAGCTCA 59.233 55.000 0.00 0.00 0.00 4.26
1347 1418 0.537188 GAGGGAATGAAGTGCTCCGA 59.463 55.000 0.00 0.00 0.00 4.55
1349 1420 0.537188 GGGAATGAAGTGCTCCGAGA 59.463 55.000 0.00 0.00 0.00 4.04
1442 1513 2.509336 GTGATGGGCCGACGACAG 60.509 66.667 0.00 0.00 0.00 3.51
1443 1514 2.994995 TGATGGGCCGACGACAGT 60.995 61.111 0.00 0.00 0.00 3.55
1459 1530 3.256136 CGACAGTAAGAGAGGAAACAGGT 59.744 47.826 0.00 0.00 0.00 4.00
1483 1554 1.758122 TGCGCTGGCCAGATCTAGA 60.758 57.895 37.21 9.99 38.85 2.43
1488 1559 1.344114 GCTGGCCAGATCTAGAAGGAG 59.656 57.143 37.21 6.14 0.00 3.69
1497 1568 4.584325 CAGATCTAGAAGGAGAAGGTGAGG 59.416 50.000 0.00 0.00 0.00 3.86
1505 1576 1.842381 GAGAAGGTGAGGTGGTGGGG 61.842 65.000 0.00 0.00 0.00 4.96
1506 1577 3.569200 GAAGGTGAGGTGGTGGGGC 62.569 68.421 0.00 0.00 0.00 5.80
1846 1917 2.455889 GGGTAGGTGGGGGTGGTA 59.544 66.667 0.00 0.00 0.00 3.25
1847 1918 1.997311 GGGTAGGTGGGGGTGGTAC 60.997 68.421 0.00 0.00 0.00 3.34
1848 1919 1.081648 GGTAGGTGGGGGTGGTACT 59.918 63.158 0.00 0.00 0.00 2.73
1849 1920 1.269703 GGTAGGTGGGGGTGGTACTG 61.270 65.000 0.00 0.00 0.00 2.74
1850 1921 1.081462 TAGGTGGGGGTGGTACTGG 59.919 63.158 0.00 0.00 0.00 4.00
1851 1922 2.480255 TAGGTGGGGGTGGTACTGGG 62.480 65.000 0.00 0.00 0.00 4.45
1852 1923 3.335729 GTGGGGGTGGTACTGGGG 61.336 72.222 0.00 0.00 0.00 4.96
1853 1924 3.543626 TGGGGGTGGTACTGGGGA 61.544 66.667 0.00 0.00 0.00 4.81
1854 1925 2.204182 GGGGGTGGTACTGGGGAA 60.204 66.667 0.00 0.00 0.00 3.97
1855 1926 2.306384 GGGGGTGGTACTGGGGAAG 61.306 68.421 0.00 0.00 0.00 3.46
1856 1927 1.229723 GGGGTGGTACTGGGGAAGA 60.230 63.158 0.00 0.00 0.00 2.87
1857 1928 0.843343 GGGGTGGTACTGGGGAAGAA 60.843 60.000 0.00 0.00 0.00 2.52
1858 1929 1.069775 GGGTGGTACTGGGGAAGAAA 58.930 55.000 0.00 0.00 0.00 2.52
1859 1930 1.004394 GGGTGGTACTGGGGAAGAAAG 59.996 57.143 0.00 0.00 0.00 2.62
1860 1931 1.004394 GGTGGTACTGGGGAAGAAAGG 59.996 57.143 0.00 0.00 0.00 3.11
1861 1932 1.703513 GTGGTACTGGGGAAGAAAGGT 59.296 52.381 0.00 0.00 0.00 3.50
1862 1933 1.702957 TGGTACTGGGGAAGAAAGGTG 59.297 52.381 0.00 0.00 0.00 4.00
1863 1934 1.004394 GGTACTGGGGAAGAAAGGTGG 59.996 57.143 0.00 0.00 0.00 4.61
1864 1935 1.004394 GTACTGGGGAAGAAAGGTGGG 59.996 57.143 0.00 0.00 0.00 4.61
1865 1936 1.304464 CTGGGGAAGAAAGGTGGGC 60.304 63.158 0.00 0.00 0.00 5.36
1866 1937 2.080336 CTGGGGAAGAAAGGTGGGCA 62.080 60.000 0.00 0.00 0.00 5.36
1867 1938 1.155155 GGGGAAGAAAGGTGGGCAA 59.845 57.895 0.00 0.00 0.00 4.52
1868 1939 1.185618 GGGGAAGAAAGGTGGGCAAC 61.186 60.000 0.00 0.00 0.00 4.17
1869 1940 1.524008 GGGAAGAAAGGTGGGCAACG 61.524 60.000 0.00 0.00 37.60 4.10
1870 1941 0.536460 GGAAGAAAGGTGGGCAACGA 60.536 55.000 0.00 0.00 37.60 3.85
1871 1942 0.875059 GAAGAAAGGTGGGCAACGAG 59.125 55.000 0.00 0.00 37.60 4.18
1872 1943 0.537371 AAGAAAGGTGGGCAACGAGG 60.537 55.000 0.00 0.00 37.60 4.63
1873 1944 1.971695 GAAAGGTGGGCAACGAGGG 60.972 63.158 0.00 0.00 37.60 4.30
1874 1945 3.507377 AAAGGTGGGCAACGAGGGG 62.507 63.158 0.00 0.00 37.60 4.79
1880 1951 4.280019 GGCAACGAGGGGTGGGTT 62.280 66.667 0.00 0.00 0.00 4.11
1881 1952 2.671963 GCAACGAGGGGTGGGTTC 60.672 66.667 0.00 0.00 0.00 3.62
1882 1953 2.033602 CAACGAGGGGTGGGTTCC 59.966 66.667 0.00 0.00 0.00 3.62
1883 1954 2.122099 AACGAGGGGTGGGTTCCT 60.122 61.111 0.00 0.00 35.82 3.36
1884 1955 2.526046 AACGAGGGGTGGGTTCCTG 61.526 63.158 0.00 0.00 32.74 3.86
1885 1956 4.410400 CGAGGGGTGGGTTCCTGC 62.410 72.222 0.00 0.00 32.74 4.85
1886 1957 4.410400 GAGGGGTGGGTTCCTGCG 62.410 72.222 0.00 0.00 32.74 5.18
1897 1968 2.203938 TCCTGCGGGGAAGAAGGT 60.204 61.111 12.87 0.00 41.91 3.50
1898 1969 2.045926 CCTGCGGGGAAGAAGGTG 60.046 66.667 2.57 0.00 37.23 4.00
1899 1970 2.045926 CTGCGGGGAAGAAGGTGG 60.046 66.667 0.00 0.00 0.00 4.61
1900 1971 3.628646 CTGCGGGGAAGAAGGTGGG 62.629 68.421 0.00 0.00 0.00 4.61
1901 1972 4.426313 GCGGGGAAGAAGGTGGGG 62.426 72.222 0.00 0.00 0.00 4.96
1902 1973 2.933834 CGGGGAAGAAGGTGGGGT 60.934 66.667 0.00 0.00 0.00 4.95
1903 1974 2.763902 GGGGAAGAAGGTGGGGTG 59.236 66.667 0.00 0.00 0.00 4.61
1904 1975 2.160853 GGGGAAGAAGGTGGGGTGT 61.161 63.158 0.00 0.00 0.00 4.16
1905 1976 0.843343 GGGGAAGAAGGTGGGGTGTA 60.843 60.000 0.00 0.00 0.00 2.90
1906 1977 0.618981 GGGAAGAAGGTGGGGTGTAG 59.381 60.000 0.00 0.00 0.00 2.74
1907 1978 0.618981 GGAAGAAGGTGGGGTGTAGG 59.381 60.000 0.00 0.00 0.00 3.18
1908 1979 0.618981 GAAGAAGGTGGGGTGTAGGG 59.381 60.000 0.00 0.00 0.00 3.53
1909 1980 0.845102 AAGAAGGTGGGGTGTAGGGG 60.845 60.000 0.00 0.00 0.00 4.79
1910 1981 1.540617 GAAGGTGGGGTGTAGGGGT 60.541 63.158 0.00 0.00 0.00 4.95
1911 1982 1.072459 AAGGTGGGGTGTAGGGGTT 60.072 57.895 0.00 0.00 0.00 4.11
1912 1983 1.432023 AAGGTGGGGTGTAGGGGTTG 61.432 60.000 0.00 0.00 0.00 3.77
1913 1984 2.761160 GTGGGGTGTAGGGGTTGG 59.239 66.667 0.00 0.00 0.00 3.77
1914 1985 2.533232 TGGGGTGTAGGGGTTGGG 60.533 66.667 0.00 0.00 0.00 4.12
1915 1986 4.056584 GGGGTGTAGGGGTTGGGC 62.057 72.222 0.00 0.00 0.00 5.36
1916 1987 2.939353 GGGTGTAGGGGTTGGGCT 60.939 66.667 0.00 0.00 0.00 5.19
1917 1988 2.544745 GGGTGTAGGGGTTGGGCTT 61.545 63.158 0.00 0.00 0.00 4.35
1918 1989 1.304134 GGTGTAGGGGTTGGGCTTG 60.304 63.158 0.00 0.00 0.00 4.01
1919 1990 1.765074 GTGTAGGGGTTGGGCTTGA 59.235 57.895 0.00 0.00 0.00 3.02
1920 1991 0.322546 GTGTAGGGGTTGGGCTTGAG 60.323 60.000 0.00 0.00 0.00 3.02
1921 1992 1.378646 GTAGGGGTTGGGCTTGAGC 60.379 63.158 0.00 0.00 41.14 4.26
1922 1993 1.541368 TAGGGGTTGGGCTTGAGCT 60.541 57.895 2.66 0.00 41.70 4.09
1923 1994 0.252974 TAGGGGTTGGGCTTGAGCTA 60.253 55.000 2.66 0.00 41.70 3.32
1924 1995 1.378646 GGGGTTGGGCTTGAGCTAC 60.379 63.158 2.66 0.00 41.70 3.58
1925 1996 1.685820 GGGTTGGGCTTGAGCTACT 59.314 57.895 2.66 0.00 41.70 2.57
1926 1997 0.678048 GGGTTGGGCTTGAGCTACTG 60.678 60.000 2.66 0.00 41.70 2.74
1927 1998 1.308783 GGTTGGGCTTGAGCTACTGC 61.309 60.000 2.66 0.00 41.70 4.40
1928 1999 0.606401 GTTGGGCTTGAGCTACTGCA 60.606 55.000 2.66 0.00 42.74 4.41
1929 2000 0.321919 TTGGGCTTGAGCTACTGCAG 60.322 55.000 13.48 13.48 42.74 4.41
1930 2001 1.298014 GGGCTTGAGCTACTGCAGT 59.702 57.895 25.12 25.12 42.74 4.40
1931 2002 0.322008 GGGCTTGAGCTACTGCAGTT 60.322 55.000 27.06 7.02 42.74 3.16
1932 2003 1.528129 GGCTTGAGCTACTGCAGTTT 58.472 50.000 27.06 11.37 42.74 2.66
1933 2004 1.882623 GGCTTGAGCTACTGCAGTTTT 59.117 47.619 27.06 10.97 42.74 2.43
1934 2005 2.351157 GGCTTGAGCTACTGCAGTTTTG 60.351 50.000 27.06 16.28 42.74 2.44
1935 2006 2.291741 GCTTGAGCTACTGCAGTTTTGT 59.708 45.455 27.06 7.57 42.74 2.83
1936 2007 3.243201 GCTTGAGCTACTGCAGTTTTGTT 60.243 43.478 27.06 13.48 42.74 2.83
1937 2008 3.969117 TGAGCTACTGCAGTTTTGTTG 57.031 42.857 27.06 9.61 42.74 3.33
1938 2009 2.618241 TGAGCTACTGCAGTTTTGTTGG 59.382 45.455 27.06 1.16 42.74 3.77
1939 2010 1.956477 AGCTACTGCAGTTTTGTTGGG 59.044 47.619 27.06 6.55 42.74 4.12
1940 2011 1.681264 GCTACTGCAGTTTTGTTGGGT 59.319 47.619 27.06 0.00 39.41 4.51
1941 2012 2.100749 GCTACTGCAGTTTTGTTGGGTT 59.899 45.455 27.06 0.00 39.41 4.11
1942 2013 2.671130 ACTGCAGTTTTGTTGGGTTG 57.329 45.000 15.25 0.00 0.00 3.77
1943 2014 1.289276 CTGCAGTTTTGTTGGGTTGC 58.711 50.000 5.25 0.00 0.00 4.17
1944 2015 0.901124 TGCAGTTTTGTTGGGTTGCT 59.099 45.000 0.00 0.00 33.00 3.91
1945 2016 1.289276 GCAGTTTTGTTGGGTTGCTG 58.711 50.000 0.00 0.00 0.00 4.41
1946 2017 1.405391 GCAGTTTTGTTGGGTTGCTGT 60.405 47.619 0.00 0.00 0.00 4.40
1947 2018 2.270047 CAGTTTTGTTGGGTTGCTGTG 58.730 47.619 0.00 0.00 0.00 3.66
1948 2019 1.006086 GTTTTGTTGGGTTGCTGTGC 58.994 50.000 0.00 0.00 0.00 4.57
1949 2020 0.610174 TTTTGTTGGGTTGCTGTGCA 59.390 45.000 0.00 0.00 36.47 4.57
1950 2021 0.175302 TTTGTTGGGTTGCTGTGCAG 59.825 50.000 0.00 0.00 40.61 4.41
1951 2022 0.969917 TTGTTGGGTTGCTGTGCAGT 60.970 50.000 0.00 0.00 40.61 4.40
1952 2023 0.969917 TGTTGGGTTGCTGTGCAGTT 60.970 50.000 0.00 0.00 40.61 3.16
1953 2024 0.249031 GTTGGGTTGCTGTGCAGTTC 60.249 55.000 0.00 0.00 40.61 3.01
1954 2025 0.682532 TTGGGTTGCTGTGCAGTTCA 60.683 50.000 0.00 0.00 40.61 3.18
1955 2026 1.102809 TGGGTTGCTGTGCAGTTCAG 61.103 55.000 0.00 0.00 40.61 3.02
1956 2027 1.656441 GGTTGCTGTGCAGTTCAGG 59.344 57.895 5.10 0.00 40.61 3.86
1957 2028 1.103398 GGTTGCTGTGCAGTTCAGGT 61.103 55.000 5.10 0.00 40.61 4.00
1958 2029 0.308993 GTTGCTGTGCAGTTCAGGTC 59.691 55.000 5.10 0.00 40.61 3.85
1959 2030 0.181114 TTGCTGTGCAGTTCAGGTCT 59.819 50.000 5.10 0.00 40.61 3.85
1960 2031 0.533531 TGCTGTGCAGTTCAGGTCTG 60.534 55.000 5.10 0.00 33.32 3.51
1961 2032 1.233285 GCTGTGCAGTTCAGGTCTGG 61.233 60.000 5.10 0.00 33.98 3.86
1962 2033 0.107456 CTGTGCAGTTCAGGTCTGGT 59.893 55.000 0.00 0.00 33.98 4.00
1963 2034 0.179048 TGTGCAGTTCAGGTCTGGTG 60.179 55.000 0.00 0.00 33.98 4.17
1964 2035 0.886490 GTGCAGTTCAGGTCTGGTGG 60.886 60.000 0.00 0.00 33.98 4.61
1965 2036 1.053835 TGCAGTTCAGGTCTGGTGGA 61.054 55.000 0.00 0.00 33.98 4.02
1966 2037 0.326264 GCAGTTCAGGTCTGGTGGAT 59.674 55.000 0.00 0.00 33.98 3.41
1967 2038 1.677217 GCAGTTCAGGTCTGGTGGATC 60.677 57.143 0.00 0.00 33.98 3.36
1968 2039 0.898320 AGTTCAGGTCTGGTGGATCG 59.102 55.000 0.00 0.00 0.00 3.69
1969 2040 0.895530 GTTCAGGTCTGGTGGATCGA 59.104 55.000 0.00 0.00 0.00 3.59
1970 2041 1.134965 GTTCAGGTCTGGTGGATCGAG 60.135 57.143 0.00 0.00 0.00 4.04
1971 2042 1.142748 CAGGTCTGGTGGATCGAGC 59.857 63.158 0.00 0.00 0.00 5.03
1972 2043 1.305297 AGGTCTGGTGGATCGAGCA 60.305 57.895 9.34 9.34 0.00 4.26
1973 2044 0.904865 AGGTCTGGTGGATCGAGCAA 60.905 55.000 10.88 0.00 0.00 3.91
1974 2045 0.179000 GGTCTGGTGGATCGAGCAAT 59.821 55.000 10.88 0.00 0.00 3.56
1975 2046 1.293924 GTCTGGTGGATCGAGCAATG 58.706 55.000 10.88 0.87 0.00 2.82
1976 2047 0.904649 TCTGGTGGATCGAGCAATGT 59.095 50.000 10.88 0.00 0.00 2.71
1977 2048 2.107366 TCTGGTGGATCGAGCAATGTA 58.893 47.619 10.88 0.00 0.00 2.29
1978 2049 2.700371 TCTGGTGGATCGAGCAATGTAT 59.300 45.455 10.88 0.00 0.00 2.29
1979 2050 3.895041 TCTGGTGGATCGAGCAATGTATA 59.105 43.478 10.88 0.00 0.00 1.47
1980 2051 4.528206 TCTGGTGGATCGAGCAATGTATAT 59.472 41.667 10.88 0.00 0.00 0.86
1981 2052 4.568956 TGGTGGATCGAGCAATGTATATG 58.431 43.478 7.18 0.00 0.00 1.78
1982 2053 4.040339 TGGTGGATCGAGCAATGTATATGT 59.960 41.667 7.18 0.00 0.00 2.29
1983 2054 4.389992 GGTGGATCGAGCAATGTATATGTG 59.610 45.833 1.84 0.00 0.00 3.21
1984 2055 4.991056 GTGGATCGAGCAATGTATATGTGT 59.009 41.667 1.84 0.00 0.00 3.72
1985 2056 5.466728 GTGGATCGAGCAATGTATATGTGTT 59.533 40.000 1.84 0.00 0.00 3.32
1986 2057 6.645003 GTGGATCGAGCAATGTATATGTGTTA 59.355 38.462 1.84 0.00 0.00 2.41
1987 2058 6.868339 TGGATCGAGCAATGTATATGTGTTAG 59.132 38.462 1.84 0.00 0.00 2.34
1988 2059 6.183360 GGATCGAGCAATGTATATGTGTTAGC 60.183 42.308 1.84 0.00 0.00 3.09
1989 2060 5.596845 TCGAGCAATGTATATGTGTTAGCA 58.403 37.500 0.00 0.00 0.00 3.49
1990 2061 5.691754 TCGAGCAATGTATATGTGTTAGCAG 59.308 40.000 0.00 0.00 0.00 4.24
1991 2062 5.691754 CGAGCAATGTATATGTGTTAGCAGA 59.308 40.000 0.00 0.00 0.00 4.26
1992 2063 6.200854 CGAGCAATGTATATGTGTTAGCAGAA 59.799 38.462 0.00 0.00 0.00 3.02
1993 2064 7.095481 CGAGCAATGTATATGTGTTAGCAGAAT 60.095 37.037 0.00 0.00 0.00 2.40
1994 2065 9.208022 GAGCAATGTATATGTGTTAGCAGAATA 57.792 33.333 0.00 0.00 0.00 1.75
1995 2066 9.559732 AGCAATGTATATGTGTTAGCAGAATAA 57.440 29.630 0.00 0.00 0.00 1.40
1996 2067 9.817365 GCAATGTATATGTGTTAGCAGAATAAG 57.183 33.333 0.00 0.00 0.00 1.73
2005 2076 8.220755 TGTGTTAGCAGAATAAGAGTTTTTGT 57.779 30.769 0.00 0.00 0.00 2.83
2006 2077 8.682710 TGTGTTAGCAGAATAAGAGTTTTTGTT 58.317 29.630 0.00 0.00 0.00 2.83
2007 2078 8.958043 GTGTTAGCAGAATAAGAGTTTTTGTTG 58.042 33.333 0.00 0.00 0.00 3.33
2008 2079 8.682710 TGTTAGCAGAATAAGAGTTTTTGTTGT 58.317 29.630 0.00 0.00 0.00 3.32
2009 2080 9.516314 GTTAGCAGAATAAGAGTTTTTGTTGTT 57.484 29.630 0.00 0.00 0.00 2.83
2012 2083 9.120538 AGCAGAATAAGAGTTTTTGTTGTTAGA 57.879 29.630 0.00 0.00 0.00 2.10
2013 2084 9.730420 GCAGAATAAGAGTTTTTGTTGTTAGAA 57.270 29.630 0.00 0.00 0.00 2.10
2021 2092 9.628500 AGAGTTTTTGTTGTTAGAATAAGGTCT 57.372 29.630 0.00 0.00 0.00 3.85
2027 2098 8.857694 TTGTTGTTAGAATAAGGTCTTAAGGG 57.142 34.615 1.85 0.00 0.00 3.95
2028 2099 7.399634 TGTTGTTAGAATAAGGTCTTAAGGGG 58.600 38.462 1.85 0.00 0.00 4.79
2029 2100 7.017850 TGTTGTTAGAATAAGGTCTTAAGGGGT 59.982 37.037 1.85 0.00 0.00 4.95
2030 2101 6.954232 TGTTAGAATAAGGTCTTAAGGGGTG 58.046 40.000 1.85 0.00 0.00 4.61
2031 2102 6.502863 TGTTAGAATAAGGTCTTAAGGGGTGT 59.497 38.462 1.85 0.00 0.00 4.16
2032 2103 7.017850 TGTTAGAATAAGGTCTTAAGGGGTGTT 59.982 37.037 1.85 0.00 0.00 3.32
2033 2104 5.816682 AGAATAAGGTCTTAAGGGGTGTTG 58.183 41.667 1.85 0.00 0.00 3.33
2034 2105 5.312443 AGAATAAGGTCTTAAGGGGTGTTGT 59.688 40.000 1.85 0.00 0.00 3.32
2035 2106 3.965470 AAGGTCTTAAGGGGTGTTGTT 57.035 42.857 1.85 0.00 0.00 2.83
2036 2107 3.223674 AGGTCTTAAGGGGTGTTGTTG 57.776 47.619 1.85 0.00 0.00 3.33
2037 2108 2.158519 AGGTCTTAAGGGGTGTTGTTGG 60.159 50.000 1.85 0.00 0.00 3.77
2038 2109 2.158579 GGTCTTAAGGGGTGTTGTTGGA 60.159 50.000 1.85 0.00 0.00 3.53
2039 2110 3.558033 GTCTTAAGGGGTGTTGTTGGAA 58.442 45.455 1.85 0.00 0.00 3.53
2040 2111 4.149598 GTCTTAAGGGGTGTTGTTGGAAT 58.850 43.478 1.85 0.00 0.00 3.01
2041 2112 5.318630 GTCTTAAGGGGTGTTGTTGGAATA 58.681 41.667 1.85 0.00 0.00 1.75
2042 2113 5.949952 GTCTTAAGGGGTGTTGTTGGAATAT 59.050 40.000 1.85 0.00 0.00 1.28
2043 2114 7.114095 GTCTTAAGGGGTGTTGTTGGAATATA 58.886 38.462 1.85 0.00 0.00 0.86
2044 2115 7.066645 GTCTTAAGGGGTGTTGTTGGAATATAC 59.933 40.741 1.85 0.00 0.00 1.47
2045 2116 4.245251 AGGGGTGTTGTTGGAATATACC 57.755 45.455 0.00 0.00 0.00 2.73
2046 2117 3.053170 AGGGGTGTTGTTGGAATATACCC 60.053 47.826 0.00 0.00 44.31 3.69
2047 2118 3.309265 GGGGTGTTGTTGGAATATACCCA 60.309 47.826 11.26 0.56 46.30 4.51
2048 2119 3.697542 GGGTGTTGTTGGAATATACCCAC 59.302 47.826 0.00 0.00 44.41 4.61
2049 2120 4.337145 GGTGTTGTTGGAATATACCCACA 58.663 43.478 0.00 0.00 34.51 4.17
2050 2121 4.157105 GGTGTTGTTGGAATATACCCACAC 59.843 45.833 0.00 0.00 35.75 3.82
2051 2122 5.007682 GTGTTGTTGGAATATACCCACACT 58.992 41.667 0.00 0.00 35.75 3.55
2052 2123 6.174760 GTGTTGTTGGAATATACCCACACTA 58.825 40.000 0.00 0.00 35.75 2.74
2053 2124 6.826741 GTGTTGTTGGAATATACCCACACTAT 59.173 38.462 0.00 0.00 35.75 2.12
2054 2125 7.988599 GTGTTGTTGGAATATACCCACACTATA 59.011 37.037 0.00 0.00 35.75 1.31
2055 2126 8.719596 TGTTGTTGGAATATACCCACACTATAT 58.280 33.333 0.00 0.00 35.75 0.86
2129 2200 7.944729 ATAGACAAGCATATCCAACAAGTTT 57.055 32.000 0.00 0.00 0.00 2.66
2130 2201 6.259550 AGACAAGCATATCCAACAAGTTTC 57.740 37.500 0.00 0.00 0.00 2.78
2131 2202 5.183904 AGACAAGCATATCCAACAAGTTTCC 59.816 40.000 0.00 0.00 0.00 3.13
2132 2203 4.832266 ACAAGCATATCCAACAAGTTTCCA 59.168 37.500 0.00 0.00 0.00 3.53
2133 2204 5.304101 ACAAGCATATCCAACAAGTTTCCAA 59.696 36.000 0.00 0.00 0.00 3.53
2134 2205 5.391312 AGCATATCCAACAAGTTTCCAAC 57.609 39.130 0.00 0.00 0.00 3.77
2135 2206 4.832266 AGCATATCCAACAAGTTTCCAACA 59.168 37.500 0.00 0.00 0.00 3.33
2136 2207 4.923281 GCATATCCAACAAGTTTCCAACAC 59.077 41.667 0.00 0.00 0.00 3.32
2137 2208 5.278957 GCATATCCAACAAGTTTCCAACACT 60.279 40.000 0.00 0.00 0.00 3.55
2138 2209 6.072175 GCATATCCAACAAGTTTCCAACACTA 60.072 38.462 0.00 0.00 0.00 2.74
2139 2210 5.767816 ATCCAACAAGTTTCCAACACTAC 57.232 39.130 0.00 0.00 0.00 2.73
2140 2211 4.590918 TCCAACAAGTTTCCAACACTACA 58.409 39.130 0.00 0.00 0.00 2.74
2141 2212 5.197451 TCCAACAAGTTTCCAACACTACAT 58.803 37.500 0.00 0.00 0.00 2.29
2142 2213 6.358178 TCCAACAAGTTTCCAACACTACATA 58.642 36.000 0.00 0.00 0.00 2.29
2143 2214 7.001674 TCCAACAAGTTTCCAACACTACATAT 58.998 34.615 0.00 0.00 0.00 1.78
2144 2215 7.174253 TCCAACAAGTTTCCAACACTACATATC 59.826 37.037 0.00 0.00 0.00 1.63
2145 2216 7.305474 CAACAAGTTTCCAACACTACATATCC 58.695 38.462 0.00 0.00 0.00 2.59
2146 2217 6.539173 ACAAGTTTCCAACACTACATATCCA 58.461 36.000 0.00 0.00 0.00 3.41
2147 2218 7.001674 ACAAGTTTCCAACACTACATATCCAA 58.998 34.615 0.00 0.00 0.00 3.53
2148 2219 7.669722 ACAAGTTTCCAACACTACATATCCAAT 59.330 33.333 0.00 0.00 0.00 3.16
2149 2220 9.173021 CAAGTTTCCAACACTACATATCCAATA 57.827 33.333 0.00 0.00 0.00 1.90
2150 2221 9.747898 AAGTTTCCAACACTACATATCCAATAA 57.252 29.630 0.00 0.00 0.00 1.40
2151 2222 9.396022 AGTTTCCAACACTACATATCCAATAAG 57.604 33.333 0.00 0.00 0.00 1.73
2152 2223 9.391006 GTTTCCAACACTACATATCCAATAAGA 57.609 33.333 0.00 0.00 0.00 2.10
2153 2224 9.967451 TTTCCAACACTACATATCCAATAAGAA 57.033 29.630 0.00 0.00 0.00 2.52
2154 2225 9.613428 TTCCAACACTACATATCCAATAAGAAG 57.387 33.333 0.00 0.00 0.00 2.85
2155 2226 8.768397 TCCAACACTACATATCCAATAAGAAGT 58.232 33.333 0.00 0.00 0.00 3.01
2156 2227 9.396022 CCAACACTACATATCCAATAAGAAGTT 57.604 33.333 0.00 0.00 0.00 2.66
2159 2230 9.614792 ACACTACATATCCAATAAGAAGTTTCC 57.385 33.333 0.00 0.00 0.00 3.13
2160 2231 9.838339 CACTACATATCCAATAAGAAGTTTCCT 57.162 33.333 0.00 0.00 0.00 3.36
2168 2239 9.807921 ATCCAATAAGAAGTTTCCTCTAACAAA 57.192 29.630 0.00 0.00 0.00 2.83
2169 2240 9.284968 TCCAATAAGAAGTTTCCTCTAACAAAG 57.715 33.333 0.00 0.00 0.00 2.77
2170 2241 9.067986 CCAATAAGAAGTTTCCTCTAACAAAGT 57.932 33.333 0.00 0.00 0.00 2.66
2171 2242 9.884465 CAATAAGAAGTTTCCTCTAACAAAGTG 57.116 33.333 0.00 0.00 0.00 3.16
2172 2243 9.847224 AATAAGAAGTTTCCTCTAACAAAGTGA 57.153 29.630 0.00 0.00 0.00 3.41
2174 2245 7.971183 AGAAGTTTCCTCTAACAAAGTGATC 57.029 36.000 0.00 0.00 0.00 2.92
2175 2246 6.647067 AGAAGTTTCCTCTAACAAAGTGATCG 59.353 38.462 0.00 0.00 0.00 3.69
2176 2247 5.855045 AGTTTCCTCTAACAAAGTGATCGT 58.145 37.500 0.00 0.00 0.00 3.73
2177 2248 6.989659 AGTTTCCTCTAACAAAGTGATCGTA 58.010 36.000 0.00 0.00 0.00 3.43
2178 2249 6.867293 AGTTTCCTCTAACAAAGTGATCGTAC 59.133 38.462 0.00 0.00 0.00 3.67
2179 2250 5.970317 TCCTCTAACAAAGTGATCGTACA 57.030 39.130 0.00 0.00 0.00 2.90
2180 2251 6.335471 TCCTCTAACAAAGTGATCGTACAA 57.665 37.500 0.00 0.00 0.00 2.41
2181 2252 6.751157 TCCTCTAACAAAGTGATCGTACAAA 58.249 36.000 0.00 0.00 0.00 2.83
2182 2253 7.211573 TCCTCTAACAAAGTGATCGTACAAAA 58.788 34.615 0.00 0.00 0.00 2.44
2183 2254 7.876068 TCCTCTAACAAAGTGATCGTACAAAAT 59.124 33.333 0.00 0.00 0.00 1.82
2184 2255 8.169268 CCTCTAACAAAGTGATCGTACAAAATC 58.831 37.037 0.00 0.00 0.00 2.17
2185 2256 8.596271 TCTAACAAAGTGATCGTACAAAATCA 57.404 30.769 0.00 0.00 0.00 2.57
2186 2257 9.047371 TCTAACAAAGTGATCGTACAAAATCAA 57.953 29.630 4.63 0.00 33.89 2.57
2187 2258 9.658475 CTAACAAAGTGATCGTACAAAATCAAA 57.342 29.630 4.63 0.00 33.89 2.69
2188 2259 8.918961 AACAAAGTGATCGTACAAAATCAAAA 57.081 26.923 4.63 0.00 33.89 2.44
2189 2260 8.335256 ACAAAGTGATCGTACAAAATCAAAAC 57.665 30.769 4.63 0.00 33.89 2.43
2190 2261 7.971168 ACAAAGTGATCGTACAAAATCAAAACA 59.029 29.630 4.63 0.00 33.89 2.83
2191 2262 8.802856 CAAAGTGATCGTACAAAATCAAAACAA 58.197 29.630 4.63 0.00 33.89 2.83
2192 2263 8.918961 AAGTGATCGTACAAAATCAAAACAAA 57.081 26.923 4.63 0.00 33.89 2.83
2193 2264 8.918961 AGTGATCGTACAAAATCAAAACAAAA 57.081 26.923 4.63 0.00 33.89 2.44
2194 2265 9.360093 AGTGATCGTACAAAATCAAAACAAAAA 57.640 25.926 4.63 0.00 33.89 1.94
2195 2266 9.618410 GTGATCGTACAAAATCAAAACAAAAAG 57.382 29.630 4.63 0.00 33.89 2.27
2196 2267 9.574458 TGATCGTACAAAATCAAAACAAAAAGA 57.426 25.926 0.00 0.00 0.00 2.52
2198 2269 8.973835 TCGTACAAAATCAAAACAAAAAGAGT 57.026 26.923 0.00 0.00 0.00 3.24
2199 2270 9.413048 TCGTACAAAATCAAAACAAAAAGAGTT 57.587 25.926 0.00 0.00 0.00 3.01
2200 2271 9.459276 CGTACAAAATCAAAACAAAAAGAGTTG 57.541 29.630 0.00 0.00 34.52 3.16
2203 2274 9.271828 ACAAAATCAAAACAAAAAGAGTTGACT 57.728 25.926 0.00 0.00 31.45 3.41
2204 2275 9.745323 CAAAATCAAAACAAAAAGAGTTGACTC 57.255 29.630 2.93 2.93 43.17 3.36
2205 2276 8.479313 AAATCAAAACAAAAAGAGTTGACTCC 57.521 30.769 7.50 0.00 43.88 3.85
2206 2277 6.582677 TCAAAACAAAAAGAGTTGACTCCA 57.417 33.333 7.50 0.00 43.88 3.86
2207 2278 7.169158 TCAAAACAAAAAGAGTTGACTCCAT 57.831 32.000 7.50 0.00 43.88 3.41
2208 2279 7.035004 TCAAAACAAAAAGAGTTGACTCCATG 58.965 34.615 7.50 4.96 43.88 3.66
2209 2280 6.773976 AAACAAAAAGAGTTGACTCCATGA 57.226 33.333 7.50 0.00 43.88 3.07
2210 2281 6.773976 AACAAAAAGAGTTGACTCCATGAA 57.226 33.333 7.50 0.00 43.88 2.57
2211 2282 6.773976 ACAAAAAGAGTTGACTCCATGAAA 57.226 33.333 7.50 0.00 43.88 2.69
2212 2283 6.799512 ACAAAAAGAGTTGACTCCATGAAAG 58.200 36.000 7.50 0.00 43.88 2.62
2213 2284 5.444663 AAAAGAGTTGACTCCATGAAAGC 57.555 39.130 7.50 0.00 43.88 3.51
2214 2285 3.777106 AGAGTTGACTCCATGAAAGCA 57.223 42.857 7.50 0.00 43.88 3.91
2215 2286 4.090761 AGAGTTGACTCCATGAAAGCAA 57.909 40.909 7.50 0.00 43.88 3.91
2216 2287 4.070716 AGAGTTGACTCCATGAAAGCAAG 58.929 43.478 7.50 0.00 43.88 4.01
2217 2288 2.555757 AGTTGACTCCATGAAAGCAAGC 59.444 45.455 0.00 0.00 0.00 4.01
2218 2289 2.555757 GTTGACTCCATGAAAGCAAGCT 59.444 45.455 0.00 0.00 0.00 3.74
2219 2290 2.430465 TGACTCCATGAAAGCAAGCTC 58.570 47.619 0.00 0.00 0.00 4.09
2220 2291 1.742268 GACTCCATGAAAGCAAGCTCC 59.258 52.381 0.00 0.00 0.00 4.70
2221 2292 1.353694 ACTCCATGAAAGCAAGCTCCT 59.646 47.619 0.00 0.00 0.00 3.69
2222 2293 2.015587 CTCCATGAAAGCAAGCTCCTC 58.984 52.381 0.00 0.00 0.00 3.71
2223 2294 1.352017 TCCATGAAAGCAAGCTCCTCA 59.648 47.619 8.64 8.64 0.00 3.86
2224 2295 2.025605 TCCATGAAAGCAAGCTCCTCAT 60.026 45.455 11.65 11.65 32.27 2.90
2225 2296 2.358267 CCATGAAAGCAAGCTCCTCATC 59.642 50.000 13.60 2.32 30.74 2.92
2226 2297 3.280295 CATGAAAGCAAGCTCCTCATCT 58.720 45.455 13.60 0.00 30.74 2.90
2227 2298 4.449131 CATGAAAGCAAGCTCCTCATCTA 58.551 43.478 13.60 0.00 30.74 1.98
2228 2299 4.558226 TGAAAGCAAGCTCCTCATCTAA 57.442 40.909 0.00 0.00 0.00 2.10
2229 2300 4.910195 TGAAAGCAAGCTCCTCATCTAAA 58.090 39.130 0.00 0.00 0.00 1.85
2230 2301 4.940046 TGAAAGCAAGCTCCTCATCTAAAG 59.060 41.667 0.00 0.00 0.00 1.85
2231 2302 2.916640 AGCAAGCTCCTCATCTAAAGC 58.083 47.619 0.00 0.00 34.95 3.51
2232 2303 2.238144 AGCAAGCTCCTCATCTAAAGCA 59.762 45.455 0.00 0.00 37.22 3.91
2233 2304 3.012518 GCAAGCTCCTCATCTAAAGCAA 58.987 45.455 0.00 0.00 37.22 3.91
2234 2305 3.441572 GCAAGCTCCTCATCTAAAGCAAA 59.558 43.478 0.00 0.00 37.22 3.68
2235 2306 4.097589 GCAAGCTCCTCATCTAAAGCAAAT 59.902 41.667 0.00 0.00 37.22 2.32
2236 2307 5.732810 GCAAGCTCCTCATCTAAAGCAAATC 60.733 44.000 0.00 0.00 37.22 2.17
2237 2308 5.370875 AGCTCCTCATCTAAAGCAAATCT 57.629 39.130 0.00 0.00 37.22 2.40
2238 2309 5.124645 AGCTCCTCATCTAAAGCAAATCTG 58.875 41.667 0.00 0.00 37.22 2.90
2254 2325 6.476243 CAAATCTGCAAATTGGGAAAGAAG 57.524 37.500 0.00 0.00 0.00 2.85
2255 2326 4.813750 ATCTGCAAATTGGGAAAGAAGG 57.186 40.909 0.00 0.00 0.00 3.46
2256 2327 3.843422 TCTGCAAATTGGGAAAGAAGGA 58.157 40.909 0.00 0.00 0.00 3.36
2257 2328 4.222336 TCTGCAAATTGGGAAAGAAGGAA 58.778 39.130 0.00 0.00 0.00 3.36
2258 2329 4.281688 TCTGCAAATTGGGAAAGAAGGAAG 59.718 41.667 0.00 0.00 0.00 3.46
2259 2330 3.966665 TGCAAATTGGGAAAGAAGGAAGT 59.033 39.130 0.00 0.00 0.00 3.01
2260 2331 4.408596 TGCAAATTGGGAAAGAAGGAAGTT 59.591 37.500 0.00 0.00 0.00 2.66
2261 2332 5.600484 TGCAAATTGGGAAAGAAGGAAGTTA 59.400 36.000 0.00 0.00 0.00 2.24
2262 2333 6.159293 GCAAATTGGGAAAGAAGGAAGTTAG 58.841 40.000 0.00 0.00 0.00 2.34
2263 2334 6.015434 GCAAATTGGGAAAGAAGGAAGTTAGA 60.015 38.462 0.00 0.00 0.00 2.10
2264 2335 7.471399 GCAAATTGGGAAAGAAGGAAGTTAGAA 60.471 37.037 0.00 0.00 0.00 2.10
2265 2336 7.767250 AATTGGGAAAGAAGGAAGTTAGAAG 57.233 36.000 0.00 0.00 0.00 2.85
2266 2337 6.509523 TTGGGAAAGAAGGAAGTTAGAAGA 57.490 37.500 0.00 0.00 0.00 2.87
2267 2338 6.509523 TGGGAAAGAAGGAAGTTAGAAGAA 57.490 37.500 0.00 0.00 0.00 2.52
2268 2339 6.534634 TGGGAAAGAAGGAAGTTAGAAGAAG 58.465 40.000 0.00 0.00 0.00 2.85
2269 2340 6.329197 TGGGAAAGAAGGAAGTTAGAAGAAGA 59.671 38.462 0.00 0.00 0.00 2.87
2270 2341 7.147373 TGGGAAAGAAGGAAGTTAGAAGAAGAA 60.147 37.037 0.00 0.00 0.00 2.52
2271 2342 7.389330 GGGAAAGAAGGAAGTTAGAAGAAGAAG 59.611 40.741 0.00 0.00 0.00 2.85
2272 2343 8.151596 GGAAAGAAGGAAGTTAGAAGAAGAAGA 58.848 37.037 0.00 0.00 0.00 2.87
2273 2344 9.549078 GAAAGAAGGAAGTTAGAAGAAGAAGAA 57.451 33.333 0.00 0.00 0.00 2.52
2274 2345 9.554395 AAAGAAGGAAGTTAGAAGAAGAAGAAG 57.446 33.333 0.00 0.00 0.00 2.85
2275 2346 7.676004 AGAAGGAAGTTAGAAGAAGAAGAAGG 58.324 38.462 0.00 0.00 0.00 3.46
2276 2347 5.800296 AGGAAGTTAGAAGAAGAAGAAGGC 58.200 41.667 0.00 0.00 0.00 4.35
2277 2348 5.546110 AGGAAGTTAGAAGAAGAAGAAGGCT 59.454 40.000 0.00 0.00 0.00 4.58
2278 2349 6.726764 AGGAAGTTAGAAGAAGAAGAAGGCTA 59.273 38.462 0.00 0.00 0.00 3.93
2279 2350 7.039270 GGAAGTTAGAAGAAGAAGAAGGCTAG 58.961 42.308 0.00 0.00 0.00 3.42
2280 2351 5.972935 AGTTAGAAGAAGAAGAAGGCTAGC 58.027 41.667 6.04 6.04 0.00 3.42
2281 2352 5.719563 AGTTAGAAGAAGAAGAAGGCTAGCT 59.280 40.000 15.72 0.00 0.00 3.32
2282 2353 6.893005 AGTTAGAAGAAGAAGAAGGCTAGCTA 59.107 38.462 15.72 0.00 0.00 3.32
2283 2354 5.852282 AGAAGAAGAAGAAGGCTAGCTAG 57.148 43.478 16.84 16.84 0.00 3.42
2284 2355 5.515106 AGAAGAAGAAGAAGGCTAGCTAGA 58.485 41.667 25.15 0.00 0.00 2.43
2285 2356 5.955355 AGAAGAAGAAGAAGGCTAGCTAGAA 59.045 40.000 25.15 0.00 0.00 2.10
2286 2357 6.439058 AGAAGAAGAAGAAGGCTAGCTAGAAA 59.561 38.462 25.15 0.00 0.00 2.52
2287 2358 6.613153 AGAAGAAGAAGGCTAGCTAGAAAA 57.387 37.500 25.15 0.00 0.00 2.29
2288 2359 7.010339 AGAAGAAGAAGGCTAGCTAGAAAAA 57.990 36.000 25.15 0.00 0.00 1.94
2289 2360 7.629157 AGAAGAAGAAGGCTAGCTAGAAAAAT 58.371 34.615 25.15 5.08 0.00 1.82
2290 2361 8.763601 AGAAGAAGAAGGCTAGCTAGAAAAATA 58.236 33.333 25.15 0.00 0.00 1.40
2291 2362 9.384764 GAAGAAGAAGGCTAGCTAGAAAAATAA 57.615 33.333 25.15 0.00 0.00 1.40
2292 2363 9.913310 AAGAAGAAGGCTAGCTAGAAAAATAAT 57.087 29.630 25.15 2.72 0.00 1.28
2331 2402 9.841295 TTATCTACTCTTTCTTAGTCTCCTCTC 57.159 37.037 0.00 0.00 0.00 3.20
2332 2403 6.655930 TCTACTCTTTCTTAGTCTCCTCTCC 58.344 44.000 0.00 0.00 0.00 3.71
2333 2404 5.530176 ACTCTTTCTTAGTCTCCTCTCCT 57.470 43.478 0.00 0.00 0.00 3.69
2334 2405 5.506708 ACTCTTTCTTAGTCTCCTCTCCTC 58.493 45.833 0.00 0.00 0.00 3.71
2335 2406 5.253096 ACTCTTTCTTAGTCTCCTCTCCTCT 59.747 44.000 0.00 0.00 0.00 3.69
2336 2407 6.147437 TCTTTCTTAGTCTCCTCTCCTCTT 57.853 41.667 0.00 0.00 0.00 2.85
2337 2408 6.184789 TCTTTCTTAGTCTCCTCTCCTCTTC 58.815 44.000 0.00 0.00 0.00 2.87
2338 2409 5.789574 TTCTTAGTCTCCTCTCCTCTTCT 57.210 43.478 0.00 0.00 0.00 2.85
2339 2410 5.789574 TCTTAGTCTCCTCTCCTCTTCTT 57.210 43.478 0.00 0.00 0.00 2.52
2340 2411 6.894735 TCTTAGTCTCCTCTCCTCTTCTTA 57.105 41.667 0.00 0.00 0.00 2.10
2341 2412 7.460214 TCTTAGTCTCCTCTCCTCTTCTTAT 57.540 40.000 0.00 0.00 0.00 1.73
2342 2413 7.514721 TCTTAGTCTCCTCTCCTCTTCTTATC 58.485 42.308 0.00 0.00 0.00 1.75
2343 2414 5.994416 AGTCTCCTCTCCTCTTCTTATCT 57.006 43.478 0.00 0.00 0.00 1.98
2344 2415 6.341408 AGTCTCCTCTCCTCTTCTTATCTT 57.659 41.667 0.00 0.00 0.00 2.40
2345 2416 6.365520 AGTCTCCTCTCCTCTTCTTATCTTC 58.634 44.000 0.00 0.00 0.00 2.87
2346 2417 6.160459 AGTCTCCTCTCCTCTTCTTATCTTCT 59.840 42.308 0.00 0.00 0.00 2.85
2347 2418 6.833933 GTCTCCTCTCCTCTTCTTATCTTCTT 59.166 42.308 0.00 0.00 0.00 2.52
2348 2419 7.013369 GTCTCCTCTCCTCTTCTTATCTTCTTC 59.987 44.444 0.00 0.00 0.00 2.87
2349 2420 6.980577 TCCTCTCCTCTTCTTATCTTCTTCT 58.019 40.000 0.00 0.00 0.00 2.85
2350 2421 8.108378 TCCTCTCCTCTTCTTATCTTCTTCTA 57.892 38.462 0.00 0.00 0.00 2.10
2351 2422 8.561769 TCCTCTCCTCTTCTTATCTTCTTCTAA 58.438 37.037 0.00 0.00 0.00 2.10
2352 2423 8.630037 CCTCTCCTCTTCTTATCTTCTTCTAAC 58.370 40.741 0.00 0.00 0.00 2.34
2353 2424 9.408648 CTCTCCTCTTCTTATCTTCTTCTAACT 57.591 37.037 0.00 0.00 0.00 2.24
2370 2441 9.314321 TCTTCTAACTAAGATAGGAAAAATGCG 57.686 33.333 0.00 0.00 33.05 4.73
2371 2442 9.314321 CTTCTAACTAAGATAGGAAAAATGCGA 57.686 33.333 0.00 0.00 33.05 5.10
2372 2443 9.832445 TTCTAACTAAGATAGGAAAAATGCGAT 57.168 29.630 0.00 0.00 33.05 4.58
2373 2444 9.832445 TCTAACTAAGATAGGAAAAATGCGATT 57.168 29.630 0.00 0.00 0.00 3.34
2402 2473 7.555306 AGCTAAGCTAGGTAAAAATGCTAAC 57.445 36.000 0.00 0.00 36.99 2.34
2403 2474 7.339482 AGCTAAGCTAGGTAAAAATGCTAACT 58.661 34.615 0.00 0.00 36.99 2.24
2404 2475 7.281100 AGCTAAGCTAGGTAAAAATGCTAACTG 59.719 37.037 0.00 0.00 36.99 3.16
2405 2476 7.065923 GCTAAGCTAGGTAAAAATGCTAACTGT 59.934 37.037 0.00 0.00 33.28 3.55
2406 2477 6.743575 AGCTAGGTAAAAATGCTAACTGTG 57.256 37.500 0.00 0.00 31.71 3.66
2407 2478 6.238648 AGCTAGGTAAAAATGCTAACTGTGT 58.761 36.000 0.00 0.00 31.71 3.72
2408 2479 7.391620 AGCTAGGTAAAAATGCTAACTGTGTA 58.608 34.615 0.00 0.00 31.71 2.90
2409 2480 7.549488 AGCTAGGTAAAAATGCTAACTGTGTAG 59.451 37.037 0.00 0.00 31.71 2.74
2410 2481 7.201617 GCTAGGTAAAAATGCTAACTGTGTAGG 60.202 40.741 0.00 0.00 0.00 3.18
2411 2482 6.540083 AGGTAAAAATGCTAACTGTGTAGGT 58.460 36.000 0.00 0.00 0.00 3.08
2412 2483 6.653740 AGGTAAAAATGCTAACTGTGTAGGTC 59.346 38.462 0.00 0.00 0.00 3.85
2413 2484 6.428771 GGTAAAAATGCTAACTGTGTAGGTCA 59.571 38.462 0.00 0.00 0.00 4.02
2414 2485 7.120726 GGTAAAAATGCTAACTGTGTAGGTCAT 59.879 37.037 0.00 0.00 0.00 3.06
2415 2486 7.524717 AAAAATGCTAACTGTGTAGGTCATT 57.475 32.000 0.00 0.00 0.00 2.57
2416 2487 7.524717 AAAATGCTAACTGTGTAGGTCATTT 57.475 32.000 0.00 0.00 35.28 2.32
2417 2488 7.524717 AAATGCTAACTGTGTAGGTCATTTT 57.475 32.000 0.00 0.00 31.32 1.82
2418 2489 8.630054 AAATGCTAACTGTGTAGGTCATTTTA 57.370 30.769 0.00 0.00 31.32 1.52
2419 2490 7.849804 ATGCTAACTGTGTAGGTCATTTTAG 57.150 36.000 0.00 0.00 0.00 1.85
2420 2491 6.999950 TGCTAACTGTGTAGGTCATTTTAGA 58.000 36.000 0.00 0.00 0.00 2.10
2421 2492 7.097192 TGCTAACTGTGTAGGTCATTTTAGAG 58.903 38.462 0.00 0.00 0.00 2.43
2422 2493 6.036191 GCTAACTGTGTAGGTCATTTTAGAGC 59.964 42.308 0.00 0.00 36.31 4.09
2423 2494 5.746990 ACTGTGTAGGTCATTTTAGAGCT 57.253 39.130 0.00 0.00 46.97 4.09
2424 2495 6.852420 ACTGTGTAGGTCATTTTAGAGCTA 57.148 37.500 0.00 0.00 43.94 3.32
2425 2496 7.241042 ACTGTGTAGGTCATTTTAGAGCTAA 57.759 36.000 4.66 0.00 46.53 3.09
2426 2497 7.324178 ACTGTGTAGGTCATTTTAGAGCTAAG 58.676 38.462 4.66 2.68 46.53 2.18
2427 2498 6.106673 TGTGTAGGTCATTTTAGAGCTAAGC 58.893 40.000 4.66 0.00 46.53 3.09
2428 2499 6.070767 TGTGTAGGTCATTTTAGAGCTAAGCT 60.071 38.462 4.66 0.00 46.53 3.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 46 6.127897 GCAGTTCACTAACCTAAAGCATGAAT 60.128 38.462 0.00 0.00 36.15 2.57
43 48 4.695455 GCAGTTCACTAACCTAAAGCATGA 59.305 41.667 0.00 0.00 36.15 3.07
171 177 8.593945 AAGAAAAAGTGCATCCCATTTATAGA 57.406 30.769 0.00 0.00 0.00 1.98
183 189 6.586082 CCGTATTTGCTAAAGAAAAAGTGCAT 59.414 34.615 0.00 0.00 0.00 3.96
211 217 2.093306 TCCATGGTGTTCTGTTAGCG 57.907 50.000 12.58 0.00 0.00 4.26
242 248 3.490759 CGTGGATCTGTGCGGTGC 61.491 66.667 0.00 0.00 0.00 5.01
257 263 0.601841 GGTTCATTGGTCGGACACGT 60.602 55.000 10.76 0.00 41.85 4.49
260 266 0.601576 CGTGGTTCATTGGTCGGACA 60.602 55.000 10.76 0.00 0.00 4.02
464 534 2.500098 AGTGCTATTCGCTTGTCCCTTA 59.500 45.455 0.00 0.00 40.11 2.69
476 546 1.212616 CTGCCGCTACAGTGCTATTC 58.787 55.000 0.00 0.00 32.78 1.75
478 548 1.330655 ACCTGCCGCTACAGTGCTAT 61.331 55.000 0.00 0.00 35.83 2.97
479 549 1.982395 ACCTGCCGCTACAGTGCTA 60.982 57.895 0.00 0.00 35.83 3.49
480 550 3.314331 ACCTGCCGCTACAGTGCT 61.314 61.111 0.00 0.00 35.83 4.40
523 593 3.660111 GGCGAGGTGTGTGTTGCC 61.660 66.667 0.00 0.00 35.04 4.52
529 599 3.168528 AGTTGGGGCGAGGTGTGT 61.169 61.111 0.00 0.00 0.00 3.72
535 605 1.450312 GACATCCAGTTGGGGCGAG 60.450 63.158 0.00 0.00 37.22 5.03
571 641 3.732849 GAGGGAGGGGTGCAAGGG 61.733 72.222 0.00 0.00 0.00 3.95
575 645 2.822643 CTACAGGAGGGAGGGGTGCA 62.823 65.000 0.00 0.00 0.00 4.57
578 648 1.027815 ATTCTACAGGAGGGAGGGGT 58.972 55.000 0.00 0.00 0.00 4.95
637 707 4.375272 CATCGGCAGTGAGATACTCATTT 58.625 43.478 4.79 0.00 42.73 2.32
640 710 1.067669 GCATCGGCAGTGAGATACTCA 59.932 52.381 0.00 0.00 37.60 3.41
726 796 2.178890 GCTTCCTCTCCATGCAGCG 61.179 63.158 0.00 0.00 0.00 5.18
733 803 1.500783 CCCCTTTGGCTTCCTCTCCA 61.501 60.000 0.00 0.00 0.00 3.86
769 839 1.134560 AGGAAGCTATTCGACACCGAC 59.865 52.381 0.00 0.00 45.50 4.79
802 873 0.109153 CATGGATCCCGCATCTTCCA 59.891 55.000 9.90 0.00 42.18 3.53
822 893 1.760086 CATCACCTCTCCTCGCCCT 60.760 63.158 0.00 0.00 0.00 5.19
827 898 0.901124 ACACTGCATCACCTCTCCTC 59.099 55.000 0.00 0.00 0.00 3.71
844 915 0.534877 GTGTCACCACATGAGCCACA 60.535 55.000 0.00 0.00 41.44 4.17
871 942 2.102438 CACTGCATCACCACGCGAT 61.102 57.895 15.93 0.00 0.00 4.58
895 966 0.463295 CATCAAGCATGCTCGTCCCT 60.463 55.000 22.93 0.00 0.00 4.20
904 975 2.097036 TGGCTTCTTCCATCAAGCATG 58.903 47.619 6.04 0.00 45.85 4.06
909 980 4.305539 TCTTCATGGCTTCTTCCATCAA 57.694 40.909 0.00 0.00 44.63 2.57
911 982 3.568853 CCATCTTCATGGCTTCTTCCATC 59.431 47.826 0.00 0.00 44.63 3.51
925 996 1.937350 TCTACTCCCCCTCCATCTTCA 59.063 52.381 0.00 0.00 0.00 3.02
928 999 2.227703 TCTTCTACTCCCCCTCCATCT 58.772 52.381 0.00 0.00 0.00 2.90
940 1011 2.096248 CCTGCTCGACCTTCTTCTACT 58.904 52.381 0.00 0.00 0.00 2.57
961 1032 0.535780 CAGGCACACACACCATCACT 60.536 55.000 0.00 0.00 0.00 3.41
966 1037 1.031235 CAATTCAGGCACACACACCA 58.969 50.000 0.00 0.00 0.00 4.17
975 1046 2.749076 CGAACAATCTCCAATTCAGGCA 59.251 45.455 0.00 0.00 0.00 4.75
979 1050 4.551702 TCTCCGAACAATCTCCAATTCA 57.448 40.909 0.00 0.00 0.00 2.57
982 1053 3.455910 TCCATCTCCGAACAATCTCCAAT 59.544 43.478 0.00 0.00 0.00 3.16
991 1062 0.465705 GCATCCTCCATCTCCGAACA 59.534 55.000 0.00 0.00 0.00 3.18
1028 1099 0.759346 GGATCCCGAGCTATGTGGTT 59.241 55.000 0.00 0.00 0.00 3.67
1032 1103 1.349026 CCAATGGATCCCGAGCTATGT 59.651 52.381 9.90 0.00 0.00 2.29
1036 1107 1.625818 GTATCCAATGGATCCCGAGCT 59.374 52.381 19.39 0.00 42.11 4.09
1092 1163 2.340337 CGCATATGATTCATCGAGCCA 58.660 47.619 6.97 0.00 0.00 4.75
1099 1170 1.308069 GCCGGCCGCATATGATTCAT 61.308 55.000 22.85 4.28 37.47 2.57
1102 1173 3.049674 CGCCGGCCGCATATGATT 61.050 61.111 22.85 0.00 37.30 2.57
1103 1174 3.529341 TTCGCCGGCCGCATATGAT 62.529 57.895 22.85 0.00 37.30 2.45
1104 1175 4.228567 TTCGCCGGCCGCATATGA 62.229 61.111 22.85 7.45 37.30 2.15
1105 1176 4.012895 GTTCGCCGGCCGCATATG 62.013 66.667 22.85 6.84 37.30 1.78
1137 1208 1.234615 ACATGTTGTGCAGTACGCCC 61.235 55.000 0.00 0.00 41.33 6.13
1175 1246 2.201959 CGGCGTGCGTCGTTTTAC 60.202 61.111 10.54 0.00 42.13 2.01
1194 1265 1.278238 GACTACGGCCTGAATTGTCG 58.722 55.000 0.00 0.00 0.00 4.35
1230 1301 2.036256 ATCAAGGTGCACCCAGCC 59.964 61.111 32.29 7.30 44.83 4.85
1234 1305 1.039233 CATGGGATCAAGGTGCACCC 61.039 60.000 32.29 15.83 40.79 4.61
1255 1326 3.004951 CCATGGAGAAGCAGCCCT 58.995 61.111 5.56 0.00 0.00 5.19
1264 1335 1.134189 CATGCTCTTGAGCCATGGAGA 60.134 52.381 18.40 8.41 0.00 3.71
1266 1337 0.106868 CCATGCTCTTGAGCCATGGA 60.107 55.000 29.07 12.58 41.53 3.41
1299 1370 4.969196 CCACACGCGTCTGCCAGT 62.969 66.667 9.86 0.00 38.08 4.00
1320 1391 1.765314 ACTTCATTCCCTCGATCTGGG 59.235 52.381 12.85 12.85 45.90 4.45
1347 1418 3.394836 GTCCCGCCTGCTCCTTCT 61.395 66.667 0.00 0.00 0.00 2.85
1390 1461 3.984186 CTCTCCCGAGCCTCCCCAA 62.984 68.421 0.00 0.00 0.00 4.12
1442 1513 2.303311 AGGCACCTGTTTCCTCTCTTAC 59.697 50.000 0.00 0.00 0.00 2.34
1443 1514 2.303022 CAGGCACCTGTTTCCTCTCTTA 59.697 50.000 8.61 0.00 39.10 2.10
1465 1536 1.329913 TTCTAGATCTGGCCAGCGCA 61.330 55.000 28.91 11.93 36.38 6.09
1470 1541 3.303938 CTTCTCCTTCTAGATCTGGCCA 58.696 50.000 4.71 4.71 0.00 5.36
1474 1545 4.584325 CCTCACCTTCTCCTTCTAGATCTG 59.416 50.000 5.18 0.00 0.00 2.90
1483 1554 1.059913 CACCACCTCACCTTCTCCTT 58.940 55.000 0.00 0.00 0.00 3.36
1488 1559 2.757077 CCCCACCACCTCACCTTC 59.243 66.667 0.00 0.00 0.00 3.46
1829 1900 1.997311 GTACCACCCCCACCTACCC 60.997 68.421 0.00 0.00 0.00 3.69
1830 1901 1.081648 AGTACCACCCCCACCTACC 59.918 63.158 0.00 0.00 0.00 3.18
1831 1902 1.269703 CCAGTACCACCCCCACCTAC 61.270 65.000 0.00 0.00 0.00 3.18
1832 1903 1.081462 CCAGTACCACCCCCACCTA 59.919 63.158 0.00 0.00 0.00 3.08
1833 1904 2.204090 CCAGTACCACCCCCACCT 60.204 66.667 0.00 0.00 0.00 4.00
1834 1905 3.335729 CCCAGTACCACCCCCACC 61.336 72.222 0.00 0.00 0.00 4.61
1835 1906 3.335729 CCCCAGTACCACCCCCAC 61.336 72.222 0.00 0.00 0.00 4.61
1836 1907 3.130153 TTCCCCAGTACCACCCCCA 62.130 63.158 0.00 0.00 0.00 4.96
1837 1908 2.204182 TTCCCCAGTACCACCCCC 60.204 66.667 0.00 0.00 0.00 5.40
1838 1909 0.843343 TTCTTCCCCAGTACCACCCC 60.843 60.000 0.00 0.00 0.00 4.95
1839 1910 1.004394 CTTTCTTCCCCAGTACCACCC 59.996 57.143 0.00 0.00 0.00 4.61
1840 1911 1.004394 CCTTTCTTCCCCAGTACCACC 59.996 57.143 0.00 0.00 0.00 4.61
1841 1912 1.703513 ACCTTTCTTCCCCAGTACCAC 59.296 52.381 0.00 0.00 0.00 4.16
1842 1913 1.702957 CACCTTTCTTCCCCAGTACCA 59.297 52.381 0.00 0.00 0.00 3.25
1843 1914 1.004394 CCACCTTTCTTCCCCAGTACC 59.996 57.143 0.00 0.00 0.00 3.34
1844 1915 1.004394 CCCACCTTTCTTCCCCAGTAC 59.996 57.143 0.00 0.00 0.00 2.73
1845 1916 1.368374 CCCACCTTTCTTCCCCAGTA 58.632 55.000 0.00 0.00 0.00 2.74
1846 1917 2.081585 GCCCACCTTTCTTCCCCAGT 62.082 60.000 0.00 0.00 0.00 4.00
1847 1918 1.304464 GCCCACCTTTCTTCCCCAG 60.304 63.158 0.00 0.00 0.00 4.45
1848 1919 1.660019 TTGCCCACCTTTCTTCCCCA 61.660 55.000 0.00 0.00 0.00 4.96
1849 1920 1.155155 TTGCCCACCTTTCTTCCCC 59.845 57.895 0.00 0.00 0.00 4.81
1850 1921 1.524008 CGTTGCCCACCTTTCTTCCC 61.524 60.000 0.00 0.00 0.00 3.97
1851 1922 0.536460 TCGTTGCCCACCTTTCTTCC 60.536 55.000 0.00 0.00 0.00 3.46
1852 1923 0.875059 CTCGTTGCCCACCTTTCTTC 59.125 55.000 0.00 0.00 0.00 2.87
1853 1924 0.537371 CCTCGTTGCCCACCTTTCTT 60.537 55.000 0.00 0.00 0.00 2.52
1854 1925 1.073199 CCTCGTTGCCCACCTTTCT 59.927 57.895 0.00 0.00 0.00 2.52
1855 1926 1.971695 CCCTCGTTGCCCACCTTTC 60.972 63.158 0.00 0.00 0.00 2.62
1856 1927 2.115266 CCCTCGTTGCCCACCTTT 59.885 61.111 0.00 0.00 0.00 3.11
1857 1928 3.966543 CCCCTCGTTGCCCACCTT 61.967 66.667 0.00 0.00 0.00 3.50
1863 1934 4.280019 AACCCACCCCTCGTTGCC 62.280 66.667 0.00 0.00 0.00 4.52
1864 1935 2.671963 GAACCCACCCCTCGTTGC 60.672 66.667 0.00 0.00 0.00 4.17
1865 1936 2.033602 GGAACCCACCCCTCGTTG 59.966 66.667 0.00 0.00 0.00 4.10
1866 1937 2.122099 AGGAACCCACCCCTCGTT 60.122 61.111 0.00 0.00 0.00 3.85
1867 1938 2.928396 CAGGAACCCACCCCTCGT 60.928 66.667 0.00 0.00 0.00 4.18
1868 1939 4.410400 GCAGGAACCCACCCCTCG 62.410 72.222 0.00 0.00 0.00 4.63
1869 1940 4.410400 CGCAGGAACCCACCCCTC 62.410 72.222 0.00 0.00 0.00 4.30
1882 1953 2.045926 CCACCTTCTTCCCCGCAG 60.046 66.667 0.00 0.00 0.00 5.18
1883 1954 3.646715 CCCACCTTCTTCCCCGCA 61.647 66.667 0.00 0.00 0.00 5.69
1884 1955 4.426313 CCCCACCTTCTTCCCCGC 62.426 72.222 0.00 0.00 0.00 6.13
1885 1956 2.933834 ACCCCACCTTCTTCCCCG 60.934 66.667 0.00 0.00 0.00 5.73
1886 1957 0.843343 TACACCCCACCTTCTTCCCC 60.843 60.000 0.00 0.00 0.00 4.81
1887 1958 0.618981 CTACACCCCACCTTCTTCCC 59.381 60.000 0.00 0.00 0.00 3.97
1888 1959 0.618981 CCTACACCCCACCTTCTTCC 59.381 60.000 0.00 0.00 0.00 3.46
1889 1960 0.618981 CCCTACACCCCACCTTCTTC 59.381 60.000 0.00 0.00 0.00 2.87
1890 1961 0.845102 CCCCTACACCCCACCTTCTT 60.845 60.000 0.00 0.00 0.00 2.52
1891 1962 1.229853 CCCCTACACCCCACCTTCT 60.230 63.158 0.00 0.00 0.00 2.85
1892 1963 1.138228 AACCCCTACACCCCACCTTC 61.138 60.000 0.00 0.00 0.00 3.46
1893 1964 1.072459 AACCCCTACACCCCACCTT 60.072 57.895 0.00 0.00 0.00 3.50
1894 1965 1.850755 CAACCCCTACACCCCACCT 60.851 63.158 0.00 0.00 0.00 4.00
1895 1966 2.761160 CAACCCCTACACCCCACC 59.239 66.667 0.00 0.00 0.00 4.61
1896 1967 2.761160 CCAACCCCTACACCCCAC 59.239 66.667 0.00 0.00 0.00 4.61
1897 1968 2.533232 CCCAACCCCTACACCCCA 60.533 66.667 0.00 0.00 0.00 4.96
1898 1969 4.056584 GCCCAACCCCTACACCCC 62.057 72.222 0.00 0.00 0.00 4.95
1899 1970 2.544745 AAGCCCAACCCCTACACCC 61.545 63.158 0.00 0.00 0.00 4.61
1900 1971 1.304134 CAAGCCCAACCCCTACACC 60.304 63.158 0.00 0.00 0.00 4.16
1901 1972 0.322546 CTCAAGCCCAACCCCTACAC 60.323 60.000 0.00 0.00 0.00 2.90
1902 1973 2.074967 CTCAAGCCCAACCCCTACA 58.925 57.895 0.00 0.00 0.00 2.74
1903 1974 1.378646 GCTCAAGCCCAACCCCTAC 60.379 63.158 0.00 0.00 34.31 3.18
1904 1975 0.252974 TAGCTCAAGCCCAACCCCTA 60.253 55.000 0.00 0.00 43.38 3.53
1905 1976 1.541368 TAGCTCAAGCCCAACCCCT 60.541 57.895 0.00 0.00 43.38 4.79
1906 1977 1.378646 GTAGCTCAAGCCCAACCCC 60.379 63.158 0.00 0.00 43.38 4.95
1907 1978 0.678048 CAGTAGCTCAAGCCCAACCC 60.678 60.000 0.00 0.00 43.38 4.11
1908 1979 1.308783 GCAGTAGCTCAAGCCCAACC 61.309 60.000 0.00 0.00 43.38 3.77
1909 1980 0.606401 TGCAGTAGCTCAAGCCCAAC 60.606 55.000 0.00 0.00 43.38 3.77
1910 1981 0.321919 CTGCAGTAGCTCAAGCCCAA 60.322 55.000 5.25 0.00 43.38 4.12
1911 1982 1.297689 CTGCAGTAGCTCAAGCCCA 59.702 57.895 5.25 0.00 43.38 5.36
1912 1983 0.322008 AACTGCAGTAGCTCAAGCCC 60.322 55.000 22.01 0.00 43.38 5.19
1913 1984 1.528129 AAACTGCAGTAGCTCAAGCC 58.472 50.000 22.01 0.00 43.38 4.35
1914 1985 2.291741 ACAAAACTGCAGTAGCTCAAGC 59.708 45.455 22.01 0.00 42.74 4.01
1915 1986 4.285292 CAACAAAACTGCAGTAGCTCAAG 58.715 43.478 22.01 8.62 42.74 3.02
1916 1987 3.066621 CCAACAAAACTGCAGTAGCTCAA 59.933 43.478 22.01 0.00 42.74 3.02
1917 1988 2.618241 CCAACAAAACTGCAGTAGCTCA 59.382 45.455 22.01 0.00 42.74 4.26
1918 1989 2.030805 CCCAACAAAACTGCAGTAGCTC 60.031 50.000 22.01 0.00 42.74 4.09
1919 1990 1.956477 CCCAACAAAACTGCAGTAGCT 59.044 47.619 22.01 0.65 42.74 3.32
1920 1991 1.681264 ACCCAACAAAACTGCAGTAGC 59.319 47.619 22.01 0.00 42.57 3.58
1921 1992 3.705604 CAACCCAACAAAACTGCAGTAG 58.294 45.455 22.01 15.50 0.00 2.57
1922 1993 2.159170 GCAACCCAACAAAACTGCAGTA 60.159 45.455 22.01 0.00 0.00 2.74
1923 1994 1.405391 GCAACCCAACAAAACTGCAGT 60.405 47.619 15.25 15.25 0.00 4.40
1924 1995 1.134729 AGCAACCCAACAAAACTGCAG 60.135 47.619 13.48 13.48 32.21 4.41
1925 1996 0.901124 AGCAACCCAACAAAACTGCA 59.099 45.000 0.00 0.00 32.21 4.41
1926 1997 1.289276 CAGCAACCCAACAAAACTGC 58.711 50.000 0.00 0.00 0.00 4.40
1927 1998 2.270047 CACAGCAACCCAACAAAACTG 58.730 47.619 0.00 0.00 0.00 3.16
1928 1999 1.405391 GCACAGCAACCCAACAAAACT 60.405 47.619 0.00 0.00 0.00 2.66
1929 2000 1.006086 GCACAGCAACCCAACAAAAC 58.994 50.000 0.00 0.00 0.00 2.43
1930 2001 0.610174 TGCACAGCAACCCAACAAAA 59.390 45.000 0.00 0.00 34.76 2.44
1931 2002 0.175302 CTGCACAGCAACCCAACAAA 59.825 50.000 0.00 0.00 38.41 2.83
1932 2003 0.969917 ACTGCACAGCAACCCAACAA 60.970 50.000 0.00 0.00 38.41 2.83
1933 2004 0.969917 AACTGCACAGCAACCCAACA 60.970 50.000 0.00 0.00 38.41 3.33
1934 2005 0.249031 GAACTGCACAGCAACCCAAC 60.249 55.000 0.00 0.00 38.41 3.77
1935 2006 0.682532 TGAACTGCACAGCAACCCAA 60.683 50.000 0.00 0.00 38.41 4.12
1936 2007 1.077140 TGAACTGCACAGCAACCCA 60.077 52.632 0.00 0.00 38.41 4.51
1937 2008 1.656441 CTGAACTGCACAGCAACCC 59.344 57.895 0.00 0.00 38.41 4.11
1938 2009 1.103398 ACCTGAACTGCACAGCAACC 61.103 55.000 0.00 0.00 38.41 3.77
1939 2010 0.308993 GACCTGAACTGCACAGCAAC 59.691 55.000 0.00 0.00 38.41 4.17
1940 2011 0.181114 AGACCTGAACTGCACAGCAA 59.819 50.000 0.00 0.00 38.41 3.91
1941 2012 0.533531 CAGACCTGAACTGCACAGCA 60.534 55.000 0.00 0.00 36.92 4.41
1942 2013 1.233285 CCAGACCTGAACTGCACAGC 61.233 60.000 0.00 0.00 34.47 4.40
1943 2014 0.107456 ACCAGACCTGAACTGCACAG 59.893 55.000 0.00 0.00 34.47 3.66
1944 2015 0.179048 CACCAGACCTGAACTGCACA 60.179 55.000 0.00 0.00 34.47 4.57
1945 2016 0.886490 CCACCAGACCTGAACTGCAC 60.886 60.000 0.00 0.00 34.47 4.57
1946 2017 1.053835 TCCACCAGACCTGAACTGCA 61.054 55.000 0.00 0.00 34.47 4.41
1947 2018 0.326264 ATCCACCAGACCTGAACTGC 59.674 55.000 0.00 0.00 34.47 4.40
1948 2019 1.404717 CGATCCACCAGACCTGAACTG 60.405 57.143 0.00 0.00 35.43 3.16
1949 2020 0.898320 CGATCCACCAGACCTGAACT 59.102 55.000 0.00 0.00 0.00 3.01
1950 2021 0.895530 TCGATCCACCAGACCTGAAC 59.104 55.000 0.00 0.00 0.00 3.18
1951 2022 1.186200 CTCGATCCACCAGACCTGAA 58.814 55.000 0.00 0.00 0.00 3.02
1952 2023 1.323271 GCTCGATCCACCAGACCTGA 61.323 60.000 0.00 0.00 0.00 3.86
1953 2024 1.142748 GCTCGATCCACCAGACCTG 59.857 63.158 0.00 0.00 0.00 4.00
1954 2025 0.904865 TTGCTCGATCCACCAGACCT 60.905 55.000 0.00 0.00 0.00 3.85
1955 2026 0.179000 ATTGCTCGATCCACCAGACC 59.821 55.000 0.00 0.00 0.00 3.85
1956 2027 1.293924 CATTGCTCGATCCACCAGAC 58.706 55.000 0.00 0.00 0.00 3.51
1957 2028 0.904649 ACATTGCTCGATCCACCAGA 59.095 50.000 0.00 0.00 0.00 3.86
1958 2029 2.602257 TACATTGCTCGATCCACCAG 57.398 50.000 0.00 0.00 0.00 4.00
1959 2030 4.040339 ACATATACATTGCTCGATCCACCA 59.960 41.667 0.00 0.00 0.00 4.17
1960 2031 4.389992 CACATATACATTGCTCGATCCACC 59.610 45.833 0.00 0.00 0.00 4.61
1961 2032 4.991056 ACACATATACATTGCTCGATCCAC 59.009 41.667 0.00 0.00 0.00 4.02
1962 2033 5.213891 ACACATATACATTGCTCGATCCA 57.786 39.130 0.00 0.00 0.00 3.41
1963 2034 6.183360 GCTAACACATATACATTGCTCGATCC 60.183 42.308 0.00 0.00 0.00 3.36
1964 2035 6.366061 TGCTAACACATATACATTGCTCGATC 59.634 38.462 0.00 0.00 0.00 3.69
1965 2036 6.223120 TGCTAACACATATACATTGCTCGAT 58.777 36.000 0.00 0.00 0.00 3.59
1966 2037 5.596845 TGCTAACACATATACATTGCTCGA 58.403 37.500 0.00 0.00 0.00 4.04
1967 2038 5.691754 TCTGCTAACACATATACATTGCTCG 59.308 40.000 0.00 0.00 0.00 5.03
1968 2039 7.482654 TTCTGCTAACACATATACATTGCTC 57.517 36.000 0.00 0.00 0.00 4.26
1969 2040 9.559732 TTATTCTGCTAACACATATACATTGCT 57.440 29.630 0.00 0.00 0.00 3.91
1970 2041 9.817365 CTTATTCTGCTAACACATATACATTGC 57.183 33.333 0.00 0.00 0.00 3.56
1979 2050 8.850156 ACAAAAACTCTTATTCTGCTAACACAT 58.150 29.630 0.00 0.00 0.00 3.21
1980 2051 8.220755 ACAAAAACTCTTATTCTGCTAACACA 57.779 30.769 0.00 0.00 0.00 3.72
1981 2052 8.958043 CAACAAAAACTCTTATTCTGCTAACAC 58.042 33.333 0.00 0.00 0.00 3.32
1982 2053 8.682710 ACAACAAAAACTCTTATTCTGCTAACA 58.317 29.630 0.00 0.00 0.00 2.41
1983 2054 9.516314 AACAACAAAAACTCTTATTCTGCTAAC 57.484 29.630 0.00 0.00 0.00 2.34
1986 2057 9.120538 TCTAACAACAAAAACTCTTATTCTGCT 57.879 29.630 0.00 0.00 0.00 4.24
1987 2058 9.730420 TTCTAACAACAAAAACTCTTATTCTGC 57.270 29.630 0.00 0.00 0.00 4.26
1995 2066 9.628500 AGACCTTATTCTAACAACAAAAACTCT 57.372 29.630 0.00 0.00 0.00 3.24
2001 2072 9.292195 CCCTTAAGACCTTATTCTAACAACAAA 57.708 33.333 3.36 0.00 0.00 2.83
2002 2073 7.886446 CCCCTTAAGACCTTATTCTAACAACAA 59.114 37.037 3.36 0.00 0.00 2.83
2003 2074 7.017850 ACCCCTTAAGACCTTATTCTAACAACA 59.982 37.037 3.36 0.00 0.00 3.33
2004 2075 7.336176 CACCCCTTAAGACCTTATTCTAACAAC 59.664 40.741 3.36 0.00 0.00 3.32
2005 2076 7.017850 ACACCCCTTAAGACCTTATTCTAACAA 59.982 37.037 3.36 0.00 0.00 2.83
2006 2077 6.502863 ACACCCCTTAAGACCTTATTCTAACA 59.497 38.462 3.36 0.00 0.00 2.41
2007 2078 6.955364 ACACCCCTTAAGACCTTATTCTAAC 58.045 40.000 3.36 0.00 0.00 2.34
2008 2079 7.017850 ACAACACCCCTTAAGACCTTATTCTAA 59.982 37.037 3.36 0.00 0.00 2.10
2009 2080 6.502863 ACAACACCCCTTAAGACCTTATTCTA 59.497 38.462 3.36 0.00 0.00 2.10
2010 2081 5.312443 ACAACACCCCTTAAGACCTTATTCT 59.688 40.000 3.36 0.00 0.00 2.40
2011 2082 5.567430 ACAACACCCCTTAAGACCTTATTC 58.433 41.667 3.36 0.00 0.00 1.75
2012 2083 5.594199 ACAACACCCCTTAAGACCTTATT 57.406 39.130 3.36 0.00 0.00 1.40
2013 2084 5.321927 CAACAACACCCCTTAAGACCTTAT 58.678 41.667 3.36 0.00 0.00 1.73
2014 2085 4.446600 CCAACAACACCCCTTAAGACCTTA 60.447 45.833 3.36 0.00 0.00 2.69
2015 2086 3.562182 CAACAACACCCCTTAAGACCTT 58.438 45.455 3.36 0.00 0.00 3.50
2016 2087 2.158519 CCAACAACACCCCTTAAGACCT 60.159 50.000 3.36 0.00 0.00 3.85
2017 2088 2.158579 TCCAACAACACCCCTTAAGACC 60.159 50.000 3.36 0.00 0.00 3.85
2018 2089 3.217681 TCCAACAACACCCCTTAAGAC 57.782 47.619 3.36 0.00 0.00 3.01
2019 2090 3.955524 TTCCAACAACACCCCTTAAGA 57.044 42.857 3.36 0.00 0.00 2.10
2020 2091 6.320418 GGTATATTCCAACAACACCCCTTAAG 59.680 42.308 0.00 0.00 0.00 1.85
2021 2092 6.189133 GGTATATTCCAACAACACCCCTTAA 58.811 40.000 0.00 0.00 0.00 1.85
2022 2093 5.340194 GGGTATATTCCAACAACACCCCTTA 60.340 44.000 0.37 0.00 38.56 2.69
2023 2094 4.571148 GGGTATATTCCAACAACACCCCTT 60.571 45.833 0.37 0.00 38.56 3.95
2024 2095 3.053170 GGGTATATTCCAACAACACCCCT 60.053 47.826 0.37 0.00 38.56 4.79
2025 2096 3.293337 GGGTATATTCCAACAACACCCC 58.707 50.000 0.37 0.00 38.56 4.95
2026 2097 3.697542 GTGGGTATATTCCAACAACACCC 59.302 47.826 1.08 0.00 43.70 4.61
2027 2098 4.157105 GTGTGGGTATATTCCAACAACACC 59.843 45.833 10.00 0.00 42.30 4.16
2028 2099 5.007682 AGTGTGGGTATATTCCAACAACAC 58.992 41.667 10.00 12.05 42.30 3.32
2029 2100 5.249780 AGTGTGGGTATATTCCAACAACA 57.750 39.130 10.00 1.65 42.30 3.33
2103 2174 9.632638 AAACTTGTTGGATATGCTTGTCTATAT 57.367 29.630 0.00 0.00 0.00 0.86
2104 2175 9.109393 GAAACTTGTTGGATATGCTTGTCTATA 57.891 33.333 0.00 0.00 0.00 1.31
2105 2176 7.067494 GGAAACTTGTTGGATATGCTTGTCTAT 59.933 37.037 0.00 0.00 0.00 1.98
2106 2177 6.374333 GGAAACTTGTTGGATATGCTTGTCTA 59.626 38.462 0.00 0.00 0.00 2.59
2107 2178 5.183904 GGAAACTTGTTGGATATGCTTGTCT 59.816 40.000 0.00 0.00 0.00 3.41
2108 2179 5.048083 TGGAAACTTGTTGGATATGCTTGTC 60.048 40.000 0.00 0.00 0.00 3.18
2109 2180 4.832266 TGGAAACTTGTTGGATATGCTTGT 59.168 37.500 0.00 0.00 0.00 3.16
2110 2181 5.389859 TGGAAACTTGTTGGATATGCTTG 57.610 39.130 0.00 0.00 0.00 4.01
2111 2182 5.783111 GTTGGAAACTTGTTGGATATGCTT 58.217 37.500 0.00 0.00 45.32 3.91
2112 2183 5.391312 GTTGGAAACTTGTTGGATATGCT 57.609 39.130 0.00 0.00 45.32 3.79
2127 2198 9.967451 TTCTTATTGGATATGTAGTGTTGGAAA 57.033 29.630 0.00 0.00 0.00 3.13
2128 2199 9.613428 CTTCTTATTGGATATGTAGTGTTGGAA 57.387 33.333 0.00 0.00 0.00 3.53
2129 2200 8.768397 ACTTCTTATTGGATATGTAGTGTTGGA 58.232 33.333 0.00 0.00 0.00 3.53
2130 2201 8.964476 ACTTCTTATTGGATATGTAGTGTTGG 57.036 34.615 0.00 0.00 0.00 3.77
2133 2204 9.614792 GGAAACTTCTTATTGGATATGTAGTGT 57.385 33.333 0.00 0.00 0.00 3.55
2134 2205 9.838339 AGGAAACTTCTTATTGGATATGTAGTG 57.162 33.333 0.00 0.00 37.44 2.74
2142 2213 9.807921 TTTGTTAGAGGAAACTTCTTATTGGAT 57.192 29.630 0.00 0.00 44.43 3.41
2143 2214 9.284968 CTTTGTTAGAGGAAACTTCTTATTGGA 57.715 33.333 0.00 0.00 44.43 3.53
2144 2215 9.067986 ACTTTGTTAGAGGAAACTTCTTATTGG 57.932 33.333 0.00 0.00 44.43 3.16
2145 2216 9.884465 CACTTTGTTAGAGGAAACTTCTTATTG 57.116 33.333 0.00 0.00 44.43 1.90
2146 2217 9.847224 TCACTTTGTTAGAGGAAACTTCTTATT 57.153 29.630 0.00 0.00 44.43 1.40
2148 2219 9.490379 GATCACTTTGTTAGAGGAAACTTCTTA 57.510 33.333 0.00 0.00 44.43 2.10
2149 2220 7.171678 CGATCACTTTGTTAGAGGAAACTTCTT 59.828 37.037 0.00 0.00 44.43 2.52
2150 2221 6.647067 CGATCACTTTGTTAGAGGAAACTTCT 59.353 38.462 0.00 0.00 44.43 2.85
2151 2222 6.424207 ACGATCACTTTGTTAGAGGAAACTTC 59.576 38.462 0.00 0.00 44.43 3.01
2152 2223 6.289064 ACGATCACTTTGTTAGAGGAAACTT 58.711 36.000 0.00 0.00 44.43 2.66
2154 2225 6.643770 TGTACGATCACTTTGTTAGAGGAAAC 59.356 38.462 0.00 0.00 0.00 2.78
2155 2226 6.751157 TGTACGATCACTTTGTTAGAGGAAA 58.249 36.000 0.00 0.00 0.00 3.13
2156 2227 6.335471 TGTACGATCACTTTGTTAGAGGAA 57.665 37.500 0.00 0.00 0.00 3.36
2157 2228 5.970317 TGTACGATCACTTTGTTAGAGGA 57.030 39.130 0.00 0.00 0.00 3.71
2158 2229 7.416154 TTTTGTACGATCACTTTGTTAGAGG 57.584 36.000 0.00 0.00 0.00 3.69
2159 2230 8.708742 TGATTTTGTACGATCACTTTGTTAGAG 58.291 33.333 0.00 0.00 0.00 2.43
2160 2231 8.596271 TGATTTTGTACGATCACTTTGTTAGA 57.404 30.769 0.00 0.00 0.00 2.10
2161 2232 9.658475 TTTGATTTTGTACGATCACTTTGTTAG 57.342 29.630 6.04 0.00 32.36 2.34
2163 2234 8.803799 GTTTTGATTTTGTACGATCACTTTGTT 58.196 29.630 6.04 0.00 32.36 2.83
2164 2235 7.971168 TGTTTTGATTTTGTACGATCACTTTGT 59.029 29.630 6.04 0.00 32.36 2.83
2165 2236 8.334016 TGTTTTGATTTTGTACGATCACTTTG 57.666 30.769 6.04 0.00 32.36 2.77
2166 2237 8.918961 TTGTTTTGATTTTGTACGATCACTTT 57.081 26.923 6.04 0.00 32.36 2.66
2167 2238 8.918961 TTTGTTTTGATTTTGTACGATCACTT 57.081 26.923 6.04 0.00 32.36 3.16
2168 2239 8.918961 TTTTGTTTTGATTTTGTACGATCACT 57.081 26.923 6.04 0.00 32.36 3.41
2169 2240 9.618410 CTTTTTGTTTTGATTTTGTACGATCAC 57.382 29.630 6.04 0.00 32.36 3.06
2170 2241 9.574458 TCTTTTTGTTTTGATTTTGTACGATCA 57.426 25.926 0.00 3.17 0.00 2.92
2172 2243 9.581099 ACTCTTTTTGTTTTGATTTTGTACGAT 57.419 25.926 0.00 0.00 0.00 3.73
2173 2244 8.973835 ACTCTTTTTGTTTTGATTTTGTACGA 57.026 26.923 0.00 0.00 0.00 3.43
2174 2245 9.459276 CAACTCTTTTTGTTTTGATTTTGTACG 57.541 29.630 0.00 0.00 0.00 3.67
2177 2248 9.271828 AGTCAACTCTTTTTGTTTTGATTTTGT 57.728 25.926 0.00 0.00 0.00 2.83
2178 2249 9.745323 GAGTCAACTCTTTTTGTTTTGATTTTG 57.255 29.630 2.86 0.00 39.81 2.44
2179 2250 8.935844 GGAGTCAACTCTTTTTGTTTTGATTTT 58.064 29.630 9.85 0.00 42.48 1.82
2180 2251 8.093927 TGGAGTCAACTCTTTTTGTTTTGATTT 58.906 29.630 9.85 0.00 42.48 2.17
2181 2252 7.610865 TGGAGTCAACTCTTTTTGTTTTGATT 58.389 30.769 9.85 0.00 42.48 2.57
2182 2253 7.169158 TGGAGTCAACTCTTTTTGTTTTGAT 57.831 32.000 9.85 0.00 42.48 2.57
2183 2254 6.582677 TGGAGTCAACTCTTTTTGTTTTGA 57.417 33.333 9.85 0.00 42.48 2.69
2184 2255 7.035004 TCATGGAGTCAACTCTTTTTGTTTTG 58.965 34.615 9.85 0.00 42.48 2.44
2185 2256 7.169158 TCATGGAGTCAACTCTTTTTGTTTT 57.831 32.000 9.85 0.00 42.48 2.43
2186 2257 6.773976 TCATGGAGTCAACTCTTTTTGTTT 57.226 33.333 9.85 0.00 42.48 2.83
2187 2258 6.773976 TTCATGGAGTCAACTCTTTTTGTT 57.226 33.333 9.85 0.00 42.48 2.83
2188 2259 6.681368 GCTTTCATGGAGTCAACTCTTTTTGT 60.681 38.462 9.85 0.00 42.48 2.83
2189 2260 5.689068 GCTTTCATGGAGTCAACTCTTTTTG 59.311 40.000 9.85 3.80 42.48 2.44
2190 2261 5.360714 TGCTTTCATGGAGTCAACTCTTTTT 59.639 36.000 9.85 0.00 42.48 1.94
2191 2262 4.889409 TGCTTTCATGGAGTCAACTCTTTT 59.111 37.500 9.85 0.00 42.48 2.27
2192 2263 4.464008 TGCTTTCATGGAGTCAACTCTTT 58.536 39.130 9.85 0.00 42.48 2.52
2193 2264 4.090761 TGCTTTCATGGAGTCAACTCTT 57.909 40.909 9.85 0.00 42.48 2.85
2194 2265 3.777106 TGCTTTCATGGAGTCAACTCT 57.223 42.857 9.85 0.00 42.48 3.24
2195 2266 3.365767 GCTTGCTTTCATGGAGTCAACTC 60.366 47.826 1.37 1.37 42.14 3.01
2196 2267 2.555757 GCTTGCTTTCATGGAGTCAACT 59.444 45.455 0.00 0.00 0.00 3.16
2197 2268 2.555757 AGCTTGCTTTCATGGAGTCAAC 59.444 45.455 0.00 0.00 0.00 3.18
2198 2269 2.816087 GAGCTTGCTTTCATGGAGTCAA 59.184 45.455 0.00 0.88 0.00 3.18
2199 2270 2.430465 GAGCTTGCTTTCATGGAGTCA 58.570 47.619 0.00 0.00 0.00 3.41
2200 2271 1.742268 GGAGCTTGCTTTCATGGAGTC 59.258 52.381 0.00 0.00 0.00 3.36
2201 2272 1.353694 AGGAGCTTGCTTTCATGGAGT 59.646 47.619 0.00 0.00 0.00 3.85
2202 2273 2.015587 GAGGAGCTTGCTTTCATGGAG 58.984 52.381 0.00 0.00 0.00 3.86
2203 2274 1.352017 TGAGGAGCTTGCTTTCATGGA 59.648 47.619 0.00 0.00 0.00 3.41
2204 2275 1.830279 TGAGGAGCTTGCTTTCATGG 58.170 50.000 0.00 0.00 0.00 3.66
2205 2276 3.280295 AGATGAGGAGCTTGCTTTCATG 58.720 45.455 20.31 0.00 0.00 3.07
2206 2277 3.648507 AGATGAGGAGCTTGCTTTCAT 57.351 42.857 17.35 17.35 0.00 2.57
2207 2278 4.558226 TTAGATGAGGAGCTTGCTTTCA 57.442 40.909 11.26 11.26 0.00 2.69
2208 2279 4.201901 GCTTTAGATGAGGAGCTTGCTTTC 60.202 45.833 0.00 0.00 32.54 2.62
2209 2280 3.693578 GCTTTAGATGAGGAGCTTGCTTT 59.306 43.478 0.00 0.00 32.54 3.51
2210 2281 3.277715 GCTTTAGATGAGGAGCTTGCTT 58.722 45.455 0.00 0.00 32.54 3.91
2211 2282 2.238144 TGCTTTAGATGAGGAGCTTGCT 59.762 45.455 0.00 0.00 36.16 3.91
2212 2283 2.636830 TGCTTTAGATGAGGAGCTTGC 58.363 47.619 0.00 0.00 36.16 4.01
2213 2284 5.589452 AGATTTGCTTTAGATGAGGAGCTTG 59.411 40.000 0.00 0.00 36.16 4.01
2214 2285 5.589452 CAGATTTGCTTTAGATGAGGAGCTT 59.411 40.000 0.00 0.00 36.16 3.74
2215 2286 5.124645 CAGATTTGCTTTAGATGAGGAGCT 58.875 41.667 0.00 0.00 36.16 4.09
2216 2287 4.261114 GCAGATTTGCTTTAGATGAGGAGC 60.261 45.833 0.00 0.00 46.95 4.70
2217 2288 5.421212 GCAGATTTGCTTTAGATGAGGAG 57.579 43.478 0.00 0.00 46.95 3.69
2231 2302 5.410439 CCTTCTTTCCCAATTTGCAGATTTG 59.590 40.000 0.00 0.00 0.00 2.32
2232 2303 5.307716 TCCTTCTTTCCCAATTTGCAGATTT 59.692 36.000 0.00 0.00 0.00 2.17
2233 2304 4.840115 TCCTTCTTTCCCAATTTGCAGATT 59.160 37.500 0.00 0.00 0.00 2.40
2234 2305 4.419282 TCCTTCTTTCCCAATTTGCAGAT 58.581 39.130 0.00 0.00 0.00 2.90
2235 2306 3.843422 TCCTTCTTTCCCAATTTGCAGA 58.157 40.909 0.00 0.00 0.00 4.26
2236 2307 4.039609 ACTTCCTTCTTTCCCAATTTGCAG 59.960 41.667 0.00 0.00 0.00 4.41
2237 2308 3.966665 ACTTCCTTCTTTCCCAATTTGCA 59.033 39.130 0.00 0.00 0.00 4.08
2238 2309 4.607293 ACTTCCTTCTTTCCCAATTTGC 57.393 40.909 0.00 0.00 0.00 3.68
2239 2310 7.524717 TCTAACTTCCTTCTTTCCCAATTTG 57.475 36.000 0.00 0.00 0.00 2.32
2240 2311 8.004801 TCTTCTAACTTCCTTCTTTCCCAATTT 58.995 33.333 0.00 0.00 0.00 1.82
2241 2312 7.526918 TCTTCTAACTTCCTTCTTTCCCAATT 58.473 34.615 0.00 0.00 0.00 2.32
2242 2313 7.091533 TCTTCTAACTTCCTTCTTTCCCAAT 57.908 36.000 0.00 0.00 0.00 3.16
2243 2314 6.509523 TCTTCTAACTTCCTTCTTTCCCAA 57.490 37.500 0.00 0.00 0.00 4.12
2244 2315 6.329197 TCTTCTTCTAACTTCCTTCTTTCCCA 59.671 38.462 0.00 0.00 0.00 4.37
2245 2316 6.770542 TCTTCTTCTAACTTCCTTCTTTCCC 58.229 40.000 0.00 0.00 0.00 3.97
2246 2317 8.151596 TCTTCTTCTTCTAACTTCCTTCTTTCC 58.848 37.037 0.00 0.00 0.00 3.13
2247 2318 9.549078 TTCTTCTTCTTCTAACTTCCTTCTTTC 57.451 33.333 0.00 0.00 0.00 2.62
2248 2319 9.554395 CTTCTTCTTCTTCTAACTTCCTTCTTT 57.446 33.333 0.00 0.00 0.00 2.52
2249 2320 8.154203 CCTTCTTCTTCTTCTAACTTCCTTCTT 58.846 37.037 0.00 0.00 0.00 2.52
2250 2321 7.676004 CCTTCTTCTTCTTCTAACTTCCTTCT 58.324 38.462 0.00 0.00 0.00 2.85
2251 2322 6.370442 GCCTTCTTCTTCTTCTAACTTCCTTC 59.630 42.308 0.00 0.00 0.00 3.46
2252 2323 6.043822 AGCCTTCTTCTTCTTCTAACTTCCTT 59.956 38.462 0.00 0.00 0.00 3.36
2253 2324 5.546110 AGCCTTCTTCTTCTTCTAACTTCCT 59.454 40.000 0.00 0.00 0.00 3.36
2254 2325 5.800296 AGCCTTCTTCTTCTTCTAACTTCC 58.200 41.667 0.00 0.00 0.00 3.46
2255 2326 6.533723 GCTAGCCTTCTTCTTCTTCTAACTTC 59.466 42.308 2.29 0.00 0.00 3.01
2256 2327 6.212589 AGCTAGCCTTCTTCTTCTTCTAACTT 59.787 38.462 12.13 0.00 0.00 2.66
2257 2328 5.719563 AGCTAGCCTTCTTCTTCTTCTAACT 59.280 40.000 12.13 0.00 0.00 2.24
2258 2329 5.972935 AGCTAGCCTTCTTCTTCTTCTAAC 58.027 41.667 12.13 0.00 0.00 2.34
2259 2330 7.120051 TCTAGCTAGCCTTCTTCTTCTTCTAA 58.880 38.462 16.35 0.00 0.00 2.10
2260 2331 6.664714 TCTAGCTAGCCTTCTTCTTCTTCTA 58.335 40.000 16.35 0.00 0.00 2.10
2261 2332 5.515106 TCTAGCTAGCCTTCTTCTTCTTCT 58.485 41.667 16.35 0.00 0.00 2.85
2262 2333 5.845391 TCTAGCTAGCCTTCTTCTTCTTC 57.155 43.478 16.35 0.00 0.00 2.87
2263 2334 6.613153 TTTCTAGCTAGCCTTCTTCTTCTT 57.387 37.500 16.35 0.00 0.00 2.52
2264 2335 6.613153 TTTTCTAGCTAGCCTTCTTCTTCT 57.387 37.500 16.35 0.00 0.00 2.85
2265 2336 7.857734 ATTTTTCTAGCTAGCCTTCTTCTTC 57.142 36.000 16.35 0.00 0.00 2.87
2266 2337 9.913310 ATTATTTTTCTAGCTAGCCTTCTTCTT 57.087 29.630 16.35 0.00 0.00 2.52
2305 2376 9.841295 GAGAGGAGACTAAGAAAGAGTAGATAA 57.159 37.037 0.00 0.00 44.43 1.75
2306 2377 8.434392 GGAGAGGAGACTAAGAAAGAGTAGATA 58.566 40.741 0.00 0.00 44.43 1.98
2307 2378 7.128883 AGGAGAGGAGACTAAGAAAGAGTAGAT 59.871 40.741 0.00 0.00 44.43 1.98
2308 2379 6.445786 AGGAGAGGAGACTAAGAAAGAGTAGA 59.554 42.308 0.00 0.00 44.43 2.59
2309 2380 6.659824 AGGAGAGGAGACTAAGAAAGAGTAG 58.340 44.000 0.00 0.00 44.43 2.57
2310 2381 6.445786 AGAGGAGAGGAGACTAAGAAAGAGTA 59.554 42.308 0.00 0.00 44.43 2.59
2311 2382 5.253096 AGAGGAGAGGAGACTAAGAAAGAGT 59.747 44.000 0.00 0.00 44.43 3.24
2312 2383 5.755849 AGAGGAGAGGAGACTAAGAAAGAG 58.244 45.833 0.00 0.00 44.43 2.85
2313 2384 5.789574 AGAGGAGAGGAGACTAAGAAAGA 57.210 43.478 0.00 0.00 44.43 2.52
2314 2385 6.187682 AGAAGAGGAGAGGAGACTAAGAAAG 58.812 44.000 0.00 0.00 44.43 2.62
2315 2386 6.147437 AGAAGAGGAGAGGAGACTAAGAAA 57.853 41.667 0.00 0.00 44.43 2.52
2316 2387 5.789574 AGAAGAGGAGAGGAGACTAAGAA 57.210 43.478 0.00 0.00 44.43 2.52
2317 2388 5.789574 AAGAAGAGGAGAGGAGACTAAGA 57.210 43.478 0.00 0.00 44.43 2.10
2318 2389 7.518188 AGATAAGAAGAGGAGAGGAGACTAAG 58.482 42.308 0.00 0.00 44.43 2.18
2319 2390 7.460214 AGATAAGAAGAGGAGAGGAGACTAA 57.540 40.000 0.00 0.00 44.43 2.24
2320 2391 7.349859 AGAAGATAAGAAGAGGAGAGGAGACTA 59.650 40.741 0.00 0.00 44.43 2.59
2322 2393 6.365520 AGAAGATAAGAAGAGGAGAGGAGAC 58.634 44.000 0.00 0.00 0.00 3.36
2323 2394 6.590656 AGAAGATAAGAAGAGGAGAGGAGA 57.409 41.667 0.00 0.00 0.00 3.71
2324 2395 7.062957 AGAAGAAGATAAGAAGAGGAGAGGAG 58.937 42.308 0.00 0.00 0.00 3.69
2325 2396 6.980577 AGAAGAAGATAAGAAGAGGAGAGGA 58.019 40.000 0.00 0.00 0.00 3.71
2326 2397 8.630037 GTTAGAAGAAGATAAGAAGAGGAGAGG 58.370 40.741 0.00 0.00 0.00 3.69
2327 2398 9.408648 AGTTAGAAGAAGATAAGAAGAGGAGAG 57.591 37.037 0.00 0.00 0.00 3.20
2344 2415 9.314321 CGCATTTTTCCTATCTTAGTTAGAAGA 57.686 33.333 0.00 0.00 39.71 2.87
2345 2416 9.314321 TCGCATTTTTCCTATCTTAGTTAGAAG 57.686 33.333 0.00 0.00 36.22 2.85
2346 2417 9.832445 ATCGCATTTTTCCTATCTTAGTTAGAA 57.168 29.630 0.00 0.00 36.22 2.10
2347 2418 9.832445 AATCGCATTTTTCCTATCTTAGTTAGA 57.168 29.630 0.00 0.00 37.28 2.10
2373 2444 9.020731 AGCATTTTTACCTAGCTTAGCTAAAAA 57.979 29.630 20.48 20.48 40.82 1.94
2374 2445 8.575649 AGCATTTTTACCTAGCTTAGCTAAAA 57.424 30.769 15.23 13.60 40.82 1.52
2375 2446 9.675464 TTAGCATTTTTACCTAGCTTAGCTAAA 57.325 29.630 15.23 7.64 40.82 1.85
2376 2447 9.106070 GTTAGCATTTTTACCTAGCTTAGCTAA 57.894 33.333 15.23 5.94 40.82 3.09
2377 2448 8.483758 AGTTAGCATTTTTACCTAGCTTAGCTA 58.516 33.333 13.70 13.70 40.44 3.32
2378 2449 7.281100 CAGTTAGCATTTTTACCTAGCTTAGCT 59.719 37.037 12.67 12.67 43.41 3.32
2379 2450 7.065923 ACAGTTAGCATTTTTACCTAGCTTAGC 59.934 37.037 0.00 0.00 36.80 3.09
2380 2451 8.391106 CACAGTTAGCATTTTTACCTAGCTTAG 58.609 37.037 0.00 0.00 36.80 2.18
2381 2452 7.881232 ACACAGTTAGCATTTTTACCTAGCTTA 59.119 33.333 0.00 0.00 36.80 3.09
2382 2453 6.715264 ACACAGTTAGCATTTTTACCTAGCTT 59.285 34.615 0.00 0.00 36.80 3.74
2383 2454 6.238648 ACACAGTTAGCATTTTTACCTAGCT 58.761 36.000 0.00 0.00 39.22 3.32
2384 2455 6.496338 ACACAGTTAGCATTTTTACCTAGC 57.504 37.500 0.00 0.00 0.00 3.42
2385 2456 7.822822 ACCTACACAGTTAGCATTTTTACCTAG 59.177 37.037 0.00 0.00 0.00 3.02
2386 2457 7.682628 ACCTACACAGTTAGCATTTTTACCTA 58.317 34.615 0.00 0.00 0.00 3.08
2387 2458 6.540083 ACCTACACAGTTAGCATTTTTACCT 58.460 36.000 0.00 0.00 0.00 3.08
2388 2459 6.428771 TGACCTACACAGTTAGCATTTTTACC 59.571 38.462 0.00 0.00 0.00 2.85
2389 2460 7.429636 TGACCTACACAGTTAGCATTTTTAC 57.570 36.000 0.00 0.00 0.00 2.01
2390 2461 8.630054 AATGACCTACACAGTTAGCATTTTTA 57.370 30.769 0.00 0.00 0.00 1.52
2391 2462 7.524717 AATGACCTACACAGTTAGCATTTTT 57.475 32.000 0.00 0.00 0.00 1.94
2392 2463 7.524717 AAATGACCTACACAGTTAGCATTTT 57.475 32.000 0.00 0.00 32.62 1.82
2393 2464 7.524717 AAAATGACCTACACAGTTAGCATTT 57.475 32.000 0.00 0.00 36.58 2.32
2394 2465 8.100791 TCTAAAATGACCTACACAGTTAGCATT 58.899 33.333 0.00 0.00 0.00 3.56
2395 2466 7.620880 TCTAAAATGACCTACACAGTTAGCAT 58.379 34.615 0.00 0.00 0.00 3.79
2396 2467 6.999950 TCTAAAATGACCTACACAGTTAGCA 58.000 36.000 0.00 0.00 0.00 3.49
2397 2468 6.036191 GCTCTAAAATGACCTACACAGTTAGC 59.964 42.308 0.00 0.00 0.00 3.09
2398 2469 7.324178 AGCTCTAAAATGACCTACACAGTTAG 58.676 38.462 0.00 0.00 0.00 2.34
2399 2470 7.241042 AGCTCTAAAATGACCTACACAGTTA 57.759 36.000 0.00 0.00 0.00 2.24
2400 2471 6.115448 AGCTCTAAAATGACCTACACAGTT 57.885 37.500 0.00 0.00 0.00 3.16
2401 2472 5.746990 AGCTCTAAAATGACCTACACAGT 57.253 39.130 0.00 0.00 0.00 3.55
2402 2473 6.256757 GCTTAGCTCTAAAATGACCTACACAG 59.743 42.308 0.00 0.00 0.00 3.66
2403 2474 6.070767 AGCTTAGCTCTAAAATGACCTACACA 60.071 38.462 0.00 0.00 30.62 3.72
2404 2475 6.342111 AGCTTAGCTCTAAAATGACCTACAC 58.658 40.000 0.00 0.00 30.62 2.90
2405 2476 6.546428 AGCTTAGCTCTAAAATGACCTACA 57.454 37.500 0.00 0.00 30.62 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.