Multiple sequence alignment - TraesCS4A01G143900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G143900 chr4A 100.000 2728 0 0 1 2728 240022466 240019739 0.000000e+00 5038.0
1 TraesCS4A01G143900 chr4A 91.006 1501 130 5 2 1500 94078282 94079779 0.000000e+00 2019.0
2 TraesCS4A01G143900 chr4A 90.594 1499 135 3 2 1500 94086369 94087861 0.000000e+00 1982.0
3 TraesCS4A01G143900 chr4A 85.693 657 78 14 1780 2424 169247171 169246519 0.000000e+00 678.0
4 TraesCS4A01G143900 chr4A 85.542 664 73 14 1780 2424 169209090 169208431 0.000000e+00 673.0
5 TraesCS4A01G143900 chr4A 90.776 477 44 0 615 1091 249127817 249127341 2.960000e-179 638.0
6 TraesCS4A01G143900 chr4A 84.127 630 75 22 5 631 293972416 293973023 1.090000e-163 586.0
7 TraesCS4A01G143900 chr4A 88.518 479 51 4 604 1080 339654327 339654803 6.550000e-161 577.0
8 TraesCS4A01G143900 chr4A 86.420 243 28 5 5 246 377340992 377341230 7.490000e-66 261.0
9 TraesCS4A01G143900 chr2A 89.474 1634 146 16 1 1625 439510308 439511924 0.000000e+00 2041.0
10 TraesCS4A01G143900 chr2A 91.657 827 61 7 1 824 439502198 439503019 0.000000e+00 1138.0
11 TraesCS4A01G143900 chr2A 91.266 561 46 1 861 1418 439502999 439503559 0.000000e+00 761.0
12 TraesCS4A01G143900 chr2A 85.354 635 70 21 7 635 418903019 418902402 1.070000e-178 636.0
13 TraesCS4A01G143900 chr2A 82.469 559 74 20 5 555 418894904 418894362 4.110000e-128 468.0
14 TraesCS4A01G143900 chr2A 95.092 163 8 0 2566 2728 361820197 361820359 9.690000e-65 257.0
15 TraesCS4A01G143900 chr2A 84.733 131 10 3 1277 1406 749747370 749747491 3.690000e-24 122.0
16 TraesCS4A01G143900 chr2A 95.918 49 2 0 1478 1526 749739448 749739496 2.250000e-11 80.5
17 TraesCS4A01G143900 chr2A 92.308 52 4 0 1478 1529 749747491 749747542 1.050000e-09 75.0
18 TraesCS4A01G143900 chr5A 89.990 1029 99 2 615 1643 263228770 263227746 0.000000e+00 1327.0
19 TraesCS4A01G143900 chr5A 86.311 1030 110 9 615 1643 263236891 263235892 0.000000e+00 1092.0
20 TraesCS4A01G143900 chr5A 85.714 525 51 18 5 518 308155123 308154612 1.440000e-147 532.0
21 TraesCS4A01G143900 chr6A 84.095 1050 130 24 2 1030 343343177 343344210 0.000000e+00 979.0
22 TraesCS4A01G143900 chr6A 91.235 502 41 3 1287 1788 221618700 221619198 0.000000e+00 680.0
23 TraesCS4A01G143900 chr6A 90.506 158 13 2 1098 1253 306362466 306362623 9.900000e-50 207.0
24 TraesCS4A01G143900 chr1A 93.323 659 35 7 1771 2424 355427909 355427255 0.000000e+00 965.0
25 TraesCS4A01G143900 chr1A 86.224 588 66 14 1848 2425 279688088 279687506 8.300000e-175 623.0
26 TraesCS4A01G143900 chr1A 90.566 159 12 1 1098 1253 189682560 189682402 9.900000e-50 207.0
27 TraesCS4A01G143900 chr1A 96.154 52 2 0 1478 1529 339542489 339542540 4.840000e-13 86.1
28 TraesCS4A01G143900 chr7A 86.997 646 56 24 1795 2424 515490944 515490311 0.000000e+00 702.0
29 TraesCS4A01G143900 chr7A 86.399 647 60 24 1795 2425 515482735 515482101 0.000000e+00 682.0
30 TraesCS4A01G143900 chr7A 88.981 481 49 4 604 1082 255722058 255721580 2.340000e-165 592.0
31 TraesCS4A01G143900 chr7A 88.518 479 49 6 604 1080 255705599 255705125 2.360000e-160 575.0
32 TraesCS4A01G143900 chr7A 89.222 167 16 1 1089 1253 267053301 267053467 9.900000e-50 207.0
33 TraesCS4A01G143900 chr3A 85.377 636 79 13 3 635 290945021 290945645 0.000000e+00 647.0
34 TraesCS4A01G143900 chr3A 87.054 533 62 6 1897 2425 220830145 220830674 1.810000e-166 595.0
35 TraesCS4A01G143900 chr3A 86.250 560 63 13 1875 2424 453435769 453435214 1.810000e-166 595.0
36 TraesCS4A01G143900 chr3A 88.147 464 52 2 1180 1643 355072650 355072190 1.430000e-152 549.0
37 TraesCS4A01G143900 chr3A 88.235 459 51 2 1180 1638 355080852 355080397 1.850000e-151 545.0
38 TraesCS4A01G143900 chr1D 83.744 609 78 21 1826 2425 63588436 63589032 8.530000e-155 556.0
39 TraesCS4A01G143900 chr1D 94.479 163 9 0 2566 2728 118751008 118751170 4.510000e-63 252.0
40 TraesCS4A01G143900 chr1D 95.862 145 5 1 2426 2569 153668697 153668841 1.630000e-57 233.0
41 TraesCS4A01G143900 chr1D 95.862 145 5 1 2426 2569 228613981 228613837 1.630000e-57 233.0
42 TraesCS4A01G143900 chr5B 95.652 161 7 0 2566 2726 346523506 346523666 2.690000e-65 259.0
43 TraesCS4A01G143900 chr4D 95.092 163 8 0 2566 2728 260197133 260197295 9.690000e-65 257.0
44 TraesCS4A01G143900 chr4D 94.702 151 7 1 2420 2569 23367146 23367296 1.630000e-57 233.0
45 TraesCS4A01G143900 chr2D 95.062 162 8 0 2566 2727 495482940 495482779 3.490000e-64 255.0
46 TraesCS4A01G143900 chr7D 94.083 169 7 3 2559 2726 425355642 425355808 1.250000e-63 254.0
47 TraesCS4A01G143900 chr7D 96.552 145 4 1 2426 2569 245655969 245656113 3.510000e-59 239.0
48 TraesCS4A01G143900 chr6D 95.031 161 8 0 2568 2728 248126253 248126413 1.250000e-63 254.0
49 TraesCS4A01G143900 chr6D 94.479 163 9 0 2566 2728 324981220 324981058 4.510000e-63 252.0
50 TraesCS4A01G143900 chr6D 95.862 145 5 1 2426 2569 410897635 410897779 1.630000e-57 233.0
51 TraesCS4A01G143900 chr6D 95.862 145 5 1 2426 2569 427405769 427405913 1.630000e-57 233.0
52 TraesCS4A01G143900 chr5D 95.862 145 5 1 2426 2569 6844298 6844154 1.630000e-57 233.0
53 TraesCS4A01G143900 chr5D 90.286 175 13 3 2556 2728 403463155 403463327 2.730000e-55 226.0
54 TraesCS4A01G143900 chr3D 94.702 151 7 1 2420 2569 449813693 449813843 1.630000e-57 233.0
55 TraesCS4A01G143900 chr3D 95.862 145 5 1 2426 2569 485838367 485838223 1.630000e-57 233.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G143900 chr4A 240019739 240022466 2727 True 5038.0 5038 100.0000 1 2728 1 chr4A.!!$R3 2727
1 TraesCS4A01G143900 chr4A 94078282 94079779 1497 False 2019.0 2019 91.0060 2 1500 1 chr4A.!!$F1 1498
2 TraesCS4A01G143900 chr4A 94086369 94087861 1492 False 1982.0 1982 90.5940 2 1500 1 chr4A.!!$F2 1498
3 TraesCS4A01G143900 chr4A 169246519 169247171 652 True 678.0 678 85.6930 1780 2424 1 chr4A.!!$R2 644
4 TraesCS4A01G143900 chr4A 169208431 169209090 659 True 673.0 673 85.5420 1780 2424 1 chr4A.!!$R1 644
5 TraesCS4A01G143900 chr4A 293972416 293973023 607 False 586.0 586 84.1270 5 631 1 chr4A.!!$F3 626
6 TraesCS4A01G143900 chr2A 439510308 439511924 1616 False 2041.0 2041 89.4740 1 1625 1 chr2A.!!$F2 1624
7 TraesCS4A01G143900 chr2A 439502198 439503559 1361 False 949.5 1138 91.4615 1 1418 2 chr2A.!!$F4 1417
8 TraesCS4A01G143900 chr2A 418902402 418903019 617 True 636.0 636 85.3540 7 635 1 chr2A.!!$R2 628
9 TraesCS4A01G143900 chr2A 418894362 418894904 542 True 468.0 468 82.4690 5 555 1 chr2A.!!$R1 550
10 TraesCS4A01G143900 chr5A 263227746 263228770 1024 True 1327.0 1327 89.9900 615 1643 1 chr5A.!!$R1 1028
11 TraesCS4A01G143900 chr5A 263235892 263236891 999 True 1092.0 1092 86.3110 615 1643 1 chr5A.!!$R2 1028
12 TraesCS4A01G143900 chr5A 308154612 308155123 511 True 532.0 532 85.7140 5 518 1 chr5A.!!$R3 513
13 TraesCS4A01G143900 chr6A 343343177 343344210 1033 False 979.0 979 84.0950 2 1030 1 chr6A.!!$F3 1028
14 TraesCS4A01G143900 chr1A 355427255 355427909 654 True 965.0 965 93.3230 1771 2424 1 chr1A.!!$R3 653
15 TraesCS4A01G143900 chr1A 279687506 279688088 582 True 623.0 623 86.2240 1848 2425 1 chr1A.!!$R2 577
16 TraesCS4A01G143900 chr7A 515490311 515490944 633 True 702.0 702 86.9970 1795 2424 1 chr7A.!!$R4 629
17 TraesCS4A01G143900 chr7A 515482101 515482735 634 True 682.0 682 86.3990 1795 2425 1 chr7A.!!$R3 630
18 TraesCS4A01G143900 chr3A 290945021 290945645 624 False 647.0 647 85.3770 3 635 1 chr3A.!!$F2 632
19 TraesCS4A01G143900 chr3A 220830145 220830674 529 False 595.0 595 87.0540 1897 2425 1 chr3A.!!$F1 528
20 TraesCS4A01G143900 chr3A 453435214 453435769 555 True 595.0 595 86.2500 1875 2424 1 chr3A.!!$R3 549
21 TraesCS4A01G143900 chr1D 63588436 63589032 596 False 556.0 556 83.7440 1826 2425 1 chr1D.!!$F1 599

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
726 752 0.109412 GAGTCGTCGATTGTTCGGGT 60.109 55.0 0.0 0.0 45.53 5.28 F
1680 1720 0.103937 GATCGGGCTGAAGGAGTCTG 59.896 60.0 0.0 0.0 33.43 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1684 1724 0.030101 CTCTTCGATCTCCCTCGCAC 59.970 60.0 0.0 0.0 38.52 5.34 R
2560 2654 0.038618 AGCGACGTCTACATGCACAA 60.039 50.0 14.7 0.0 0.00 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
181 189 7.447594 TGATAAGAGCATGATGAGAGCATTTA 58.552 34.615 0.00 0.00 34.11 1.40
246 256 2.925578 ATGATGCCACGACAACATTG 57.074 45.000 0.00 0.00 29.68 2.82
247 257 1.603456 TGATGCCACGACAACATTGT 58.397 45.000 0.00 0.00 45.65 2.71
248 258 1.952990 TGATGCCACGACAACATTGTT 59.047 42.857 0.00 0.00 42.43 2.83
400 425 2.167487 ACACGATGCAAACAAAAGGGTT 59.833 40.909 0.00 0.00 0.00 4.11
401 426 3.194062 CACGATGCAAACAAAAGGGTTT 58.806 40.909 0.00 0.00 41.44 3.27
443 468 4.096003 CCACGGGGTCATCGGCTT 62.096 66.667 0.00 0.00 0.00 4.35
469 494 0.734309 TATACCTTCGAAGTGCGCGA 59.266 50.000 23.03 2.83 40.61 5.87
521 546 9.640963 ATGTAGACAGAAGTAGTTGTACAATTC 57.359 33.333 12.26 11.15 0.00 2.17
620 646 1.674322 CCACGGTTCTTCGGGCAAT 60.674 57.895 0.00 0.00 31.23 3.56
651 677 3.508762 ACACGGTTCATAGACGTTCATC 58.491 45.455 0.00 0.00 39.02 2.92
694 720 0.899717 ACCCAAGGCGACGGTAGTTA 60.900 55.000 0.00 0.00 0.00 2.24
726 752 0.109412 GAGTCGTCGATTGTTCGGGT 60.109 55.000 0.00 0.00 45.53 5.28
813 839 1.726791 CACTGACATCGTGGTACTTGC 59.273 52.381 0.00 0.00 0.00 4.01
830 856 1.451387 GCCGTCCATGGGTACTTGG 60.451 63.158 13.02 6.21 41.90 3.61
835 861 2.420827 CGTCCATGGGTACTTGGCAATA 60.421 50.000 13.02 0.00 40.70 1.90
848 874 2.906153 TGGCAATAACGAAACGAAACG 58.094 42.857 0.00 0.00 0.00 3.60
872 901 1.700186 TGGTTGTAGTGGTACATGGCA 59.300 47.619 0.00 0.00 44.52 4.92
875 904 3.605634 GTTGTAGTGGTACATGGCATCA 58.394 45.455 0.00 0.00 44.52 3.07
879 908 1.635487 AGTGGTACATGGCATCAAGGT 59.365 47.619 0.00 0.00 44.52 3.50
937 966 2.084681 GGTCGTTCGTGTGCCGTAG 61.085 63.158 0.00 0.00 37.94 3.51
959 989 0.527817 CGTGGTACCTGCCGATCTTC 60.528 60.000 14.36 0.00 0.00 2.87
1176 1215 2.125350 GGAAGCAGAGGACGCAGG 60.125 66.667 0.00 0.00 0.00 4.85
1208 1247 1.453155 CTCGTTCATGAAACAGGGGG 58.547 55.000 10.35 0.00 37.77 5.40
1347 1386 2.492567 CCTAGGATAAGGCAGAGGAGCT 60.493 54.545 1.05 0.00 34.17 4.09
1353 1392 4.074526 GGCAGAGGAGCTGTCGCA 62.075 66.667 0.00 0.00 46.62 5.10
1359 1398 4.681978 GGAGCTGTCGCACGGGTT 62.682 66.667 0.00 0.00 34.98 4.11
1390 1430 3.486263 CCGAATGGCGTTGGACTC 58.514 61.111 2.75 0.00 38.67 3.36
1437 1477 1.144936 GATCTTGACGCAGGGGAGG 59.855 63.158 0.00 0.00 0.00 4.30
1468 1508 1.666553 GGTGATGTGGACGAACGCA 60.667 57.895 0.00 0.00 35.05 5.24
1489 1529 2.907179 GCTTACCCCTGGCACTGGT 61.907 63.158 8.16 8.16 46.69 4.00
1611 1651 1.840737 CTCGAGGTGGAAGAGAGGAA 58.159 55.000 3.91 0.00 34.13 3.36
1640 1680 1.830408 CGAGGGGAGGAAGAGCGAT 60.830 63.158 0.00 0.00 0.00 4.58
1643 1683 2.066999 GGGGAGGAAGAGCGATGGT 61.067 63.158 0.00 0.00 0.00 3.55
1644 1684 1.627297 GGGGAGGAAGAGCGATGGTT 61.627 60.000 0.00 0.00 0.00 3.67
1645 1685 0.462759 GGGAGGAAGAGCGATGGTTG 60.463 60.000 0.00 0.00 0.00 3.77
1646 1686 1.092345 GGAGGAAGAGCGATGGTTGC 61.092 60.000 0.00 0.00 0.00 4.17
1647 1687 1.424493 GAGGAAGAGCGATGGTTGCG 61.424 60.000 0.00 0.00 37.44 4.85
1648 1688 1.447838 GGAAGAGCGATGGTTGCGA 60.448 57.895 0.00 0.00 37.44 5.10
1649 1689 1.424493 GGAAGAGCGATGGTTGCGAG 61.424 60.000 0.00 0.00 37.44 5.03
1650 1690 1.424493 GAAGAGCGATGGTTGCGAGG 61.424 60.000 0.00 0.00 37.44 4.63
1651 1691 2.859273 AAGAGCGATGGTTGCGAGGG 62.859 60.000 0.00 0.00 37.44 4.30
1652 1692 3.371097 GAGCGATGGTTGCGAGGGA 62.371 63.158 0.00 0.00 37.44 4.20
1653 1693 2.892425 GCGATGGTTGCGAGGGAG 60.892 66.667 0.00 0.00 0.00 4.30
1654 1694 2.892640 CGATGGTTGCGAGGGAGA 59.107 61.111 0.00 0.00 0.00 3.71
1655 1695 1.227089 CGATGGTTGCGAGGGAGAG 60.227 63.158 0.00 0.00 0.00 3.20
1656 1696 1.667154 CGATGGTTGCGAGGGAGAGA 61.667 60.000 0.00 0.00 0.00 3.10
1657 1697 0.755686 GATGGTTGCGAGGGAGAGAT 59.244 55.000 0.00 0.00 0.00 2.75
1658 1698 0.467384 ATGGTTGCGAGGGAGAGATG 59.533 55.000 0.00 0.00 0.00 2.90
1659 1699 1.144936 GGTTGCGAGGGAGAGATGG 59.855 63.158 0.00 0.00 0.00 3.51
1660 1700 1.144936 GTTGCGAGGGAGAGATGGG 59.855 63.158 0.00 0.00 0.00 4.00
1661 1701 2.066393 TTGCGAGGGAGAGATGGGG 61.066 63.158 0.00 0.00 0.00 4.96
1662 1702 2.123251 GCGAGGGAGAGATGGGGA 60.123 66.667 0.00 0.00 0.00 4.81
1663 1703 1.535202 GCGAGGGAGAGATGGGGAT 60.535 63.158 0.00 0.00 0.00 3.85
1664 1704 1.540435 GCGAGGGAGAGATGGGGATC 61.540 65.000 0.00 0.00 0.00 3.36
1665 1705 1.247419 CGAGGGAGAGATGGGGATCG 61.247 65.000 0.00 0.00 0.00 3.69
1666 1706 0.902516 GAGGGAGAGATGGGGATCGG 60.903 65.000 0.00 0.00 0.00 4.18
1667 1707 1.915769 GGGAGAGATGGGGATCGGG 60.916 68.421 0.00 0.00 0.00 5.14
1668 1708 2.588201 GGAGAGATGGGGATCGGGC 61.588 68.421 0.00 0.00 0.00 6.13
1669 1709 1.535202 GAGAGATGGGGATCGGGCT 60.535 63.158 0.00 0.00 0.00 5.19
1670 1710 1.825281 GAGAGATGGGGATCGGGCTG 61.825 65.000 0.00 0.00 0.00 4.85
1671 1711 1.838846 GAGATGGGGATCGGGCTGA 60.839 63.158 0.00 0.00 0.00 4.26
1672 1712 1.384502 AGATGGGGATCGGGCTGAA 60.385 57.895 0.00 0.00 0.00 3.02
1673 1713 1.072159 GATGGGGATCGGGCTGAAG 59.928 63.158 0.00 0.00 0.00 3.02
1674 1714 2.403132 GATGGGGATCGGGCTGAAGG 62.403 65.000 0.00 0.00 0.00 3.46
1675 1715 2.768344 GGGGATCGGGCTGAAGGA 60.768 66.667 0.00 0.00 0.00 3.36
1676 1716 2.812619 GGGGATCGGGCTGAAGGAG 61.813 68.421 0.00 0.00 0.00 3.69
1677 1717 2.066999 GGGATCGGGCTGAAGGAGT 61.067 63.158 0.00 0.00 0.00 3.85
1678 1718 1.443828 GGATCGGGCTGAAGGAGTC 59.556 63.158 0.00 0.00 0.00 3.36
1679 1719 1.045911 GGATCGGGCTGAAGGAGTCT 61.046 60.000 0.00 0.00 0.00 3.24
1680 1720 0.103937 GATCGGGCTGAAGGAGTCTG 59.896 60.000 0.00 0.00 33.43 3.51
1681 1721 1.333636 ATCGGGCTGAAGGAGTCTGG 61.334 60.000 0.00 0.00 32.93 3.86
1682 1722 2.270527 GGGCTGAAGGAGTCTGGC 59.729 66.667 0.00 0.00 46.36 4.85
1683 1723 2.125350 GGCTGAAGGAGTCTGGCG 60.125 66.667 0.00 0.00 40.21 5.69
1684 1724 2.125350 GCTGAAGGAGTCTGGCGG 60.125 66.667 0.00 0.00 0.00 6.13
1685 1725 2.948720 GCTGAAGGAGTCTGGCGGT 61.949 63.158 0.00 0.00 0.00 5.68
1686 1726 1.079543 CTGAAGGAGTCTGGCGGTG 60.080 63.158 0.00 0.00 0.00 4.94
1687 1727 2.435059 GAAGGAGTCTGGCGGTGC 60.435 66.667 0.00 0.00 0.00 5.01
1688 1728 4.379243 AAGGAGTCTGGCGGTGCG 62.379 66.667 0.00 0.00 0.00 5.34
1690 1730 4.803426 GGAGTCTGGCGGTGCGAG 62.803 72.222 0.00 0.00 35.74 5.03
1691 1731 4.803426 GAGTCTGGCGGTGCGAGG 62.803 72.222 0.99 0.00 35.16 4.63
1697 1737 4.593864 GGCGGTGCGAGGGAGATC 62.594 72.222 0.00 0.00 0.00 2.75
1698 1738 4.933064 GCGGTGCGAGGGAGATCG 62.933 72.222 0.00 0.00 45.48 3.69
1699 1739 3.209812 CGGTGCGAGGGAGATCGA 61.210 66.667 0.00 0.00 45.56 3.59
1700 1740 2.771639 CGGTGCGAGGGAGATCGAA 61.772 63.158 0.00 0.00 45.56 3.71
1701 1741 1.066587 GGTGCGAGGGAGATCGAAG 59.933 63.158 0.00 0.00 45.56 3.79
1702 1742 1.384989 GGTGCGAGGGAGATCGAAGA 61.385 60.000 0.00 0.00 45.56 2.87
1703 1743 0.030101 GTGCGAGGGAGATCGAAGAG 59.970 60.000 0.00 0.00 45.56 2.85
1704 1744 0.107165 TGCGAGGGAGATCGAAGAGA 60.107 55.000 0.00 0.00 45.56 3.10
1705 1745 0.591170 GCGAGGGAGATCGAAGAGAG 59.409 60.000 0.00 0.00 45.56 3.20
1706 1746 1.234821 CGAGGGAGATCGAAGAGAGG 58.765 60.000 0.00 0.00 45.56 3.69
1707 1747 1.616159 GAGGGAGATCGAAGAGAGGG 58.384 60.000 0.00 0.00 43.63 4.30
1708 1748 1.144093 GAGGGAGATCGAAGAGAGGGA 59.856 57.143 0.00 0.00 43.63 4.20
1709 1749 1.144913 AGGGAGATCGAAGAGAGGGAG 59.855 57.143 0.00 0.00 43.63 4.30
1710 1750 1.144093 GGGAGATCGAAGAGAGGGAGA 59.856 57.143 0.00 0.00 43.63 3.71
1711 1751 2.504367 GGAGATCGAAGAGAGGGAGAG 58.496 57.143 0.00 0.00 43.63 3.20
1712 1752 2.504367 GAGATCGAAGAGAGGGAGAGG 58.496 57.143 0.00 0.00 43.63 3.69
1713 1753 1.144913 AGATCGAAGAGAGGGAGAGGG 59.855 57.143 0.00 0.00 43.63 4.30
1714 1754 0.930726 ATCGAAGAGAGGGAGAGGGT 59.069 55.000 0.00 0.00 43.63 4.34
1715 1755 0.705253 TCGAAGAGAGGGAGAGGGTT 59.295 55.000 0.00 0.00 0.00 4.11
1716 1756 1.107945 CGAAGAGAGGGAGAGGGTTC 58.892 60.000 0.00 0.00 0.00 3.62
1717 1757 1.107945 GAAGAGAGGGAGAGGGTTCG 58.892 60.000 0.00 0.00 0.00 3.95
1718 1758 0.705253 AAGAGAGGGAGAGGGTTCGA 59.295 55.000 0.00 0.00 0.00 3.71
1719 1759 0.257616 AGAGAGGGAGAGGGTTCGAG 59.742 60.000 0.00 0.00 0.00 4.04
1720 1760 1.380650 AGAGGGAGAGGGTTCGAGC 60.381 63.158 0.00 0.00 0.00 5.03
1721 1761 2.756283 AGGGAGAGGGTTCGAGCG 60.756 66.667 0.00 0.00 0.00 5.03
1722 1762 3.839432 GGGAGAGGGTTCGAGCGG 61.839 72.222 0.00 0.00 0.00 5.52
1723 1763 3.839432 GGAGAGGGTTCGAGCGGG 61.839 72.222 0.00 0.00 0.00 6.13
1724 1764 2.754658 GAGAGGGTTCGAGCGGGA 60.755 66.667 0.00 0.00 0.00 5.14
1725 1765 2.042843 AGAGGGTTCGAGCGGGAT 60.043 61.111 0.00 0.00 0.00 3.85
1726 1766 2.107141 GAGGGTTCGAGCGGGATG 59.893 66.667 0.00 0.00 0.00 3.51
1727 1767 2.363795 AGGGTTCGAGCGGGATGA 60.364 61.111 0.00 0.00 0.00 2.92
1728 1768 2.202892 GGGTTCGAGCGGGATGAC 60.203 66.667 0.00 0.00 0.00 3.06
1729 1769 2.722201 GGGTTCGAGCGGGATGACT 61.722 63.158 0.00 0.00 0.00 3.41
1730 1770 1.519455 GGTTCGAGCGGGATGACTG 60.519 63.158 0.00 0.00 0.00 3.51
1749 1789 2.109181 GCCTGCGGCTAGGGTTAG 59.891 66.667 16.60 0.00 46.69 2.34
1750 1790 2.822399 CCTGCGGCTAGGGTTAGG 59.178 66.667 0.00 0.00 34.06 2.69
1751 1791 1.760875 CCTGCGGCTAGGGTTAGGA 60.761 63.158 0.00 0.00 34.06 2.94
1752 1792 1.335132 CCTGCGGCTAGGGTTAGGAA 61.335 60.000 0.00 0.00 34.06 3.36
1753 1793 0.105039 CTGCGGCTAGGGTTAGGAAG 59.895 60.000 0.00 0.00 0.00 3.46
1754 1794 1.335132 TGCGGCTAGGGTTAGGAAGG 61.335 60.000 0.00 0.00 0.00 3.46
1755 1795 2.041206 GCGGCTAGGGTTAGGAAGGG 62.041 65.000 0.00 0.00 0.00 3.95
1756 1796 1.837789 GGCTAGGGTTAGGAAGGGC 59.162 63.158 0.00 0.00 0.00 5.19
1757 1797 1.446366 GCTAGGGTTAGGAAGGGCG 59.554 63.158 0.00 0.00 0.00 6.13
1758 1798 1.446366 CTAGGGTTAGGAAGGGCGC 59.554 63.158 0.00 0.00 0.00 6.53
1759 1799 2.041206 CTAGGGTTAGGAAGGGCGCC 62.041 65.000 21.18 21.18 0.00 6.53
1760 1800 4.851179 GGGTTAGGAAGGGCGCCG 62.851 72.222 22.54 0.00 0.00 6.46
1761 1801 3.777910 GGTTAGGAAGGGCGCCGA 61.778 66.667 22.54 0.00 0.00 5.54
1762 1802 2.504519 GTTAGGAAGGGCGCCGAT 59.495 61.111 22.54 12.00 0.00 4.18
1763 1803 1.887707 GTTAGGAAGGGCGCCGATG 60.888 63.158 22.54 0.00 0.00 3.84
1764 1804 3.101796 TTAGGAAGGGCGCCGATGG 62.102 63.158 22.54 0.00 0.00 3.51
1816 1861 2.669569 CCCAAGTGGCCACAGTCG 60.670 66.667 36.39 20.56 0.00 4.18
1887 1951 0.626382 GGAGAGGAAAAGGAAGGGGG 59.374 60.000 0.00 0.00 0.00 5.40
1904 1969 2.554563 GGGGTTAGGGGTAGAGTTTGA 58.445 52.381 0.00 0.00 0.00 2.69
1945 2012 4.582240 TGGACTCACAAAAATGTGCATGTA 59.418 37.500 4.13 0.00 39.49 2.29
1968 2037 6.463995 ACACAGAAAAATAGAAGTGGCAAA 57.536 33.333 0.00 0.00 0.00 3.68
2099 2172 8.046708 CCGGAATATGGTGAAAGAATATATGGA 58.953 37.037 0.00 0.00 0.00 3.41
2169 2246 4.826733 TGCAAGTGTGTTATGGTGAATTCT 59.173 37.500 7.05 0.00 0.00 2.40
2231 2310 6.647067 GGGAGGATATGTTGTAAAGAGAATCG 59.353 42.308 0.00 0.00 42.67 3.34
2244 2323 4.148128 AGAGAATCGCCATGTGAATTCT 57.852 40.909 7.05 11.39 42.67 2.40
2254 2333 4.576463 GCCATGTGAATTCTCTCGGTTTAT 59.424 41.667 7.05 0.00 0.00 1.40
2284 2365 8.310122 ACCAAAGATCCATGCTGTTTATTTAT 57.690 30.769 0.00 0.00 0.00 1.40
2315 2399 9.040939 GTTTACAAAATTAAAAGACATGCTGGT 57.959 29.630 0.00 0.00 0.00 4.00
2369 2462 4.053295 GAGCAAGCACAAATGAAACACAT 58.947 39.130 0.00 0.00 41.45 3.21
2425 2519 3.041940 GTCTTGGGGCGTCACACG 61.042 66.667 0.00 0.00 45.88 4.49
2426 2520 3.542676 TCTTGGGGCGTCACACGT 61.543 61.111 0.00 0.00 44.73 4.49
2427 2521 3.345808 CTTGGGGCGTCACACGTG 61.346 66.667 15.48 15.48 44.73 4.49
2428 2522 4.164087 TTGGGGCGTCACACGTGT 62.164 61.111 17.22 17.22 44.73 4.49
2429 2523 4.595538 TGGGGCGTCACACGTGTC 62.596 66.667 20.49 7.87 44.73 3.67
2430 2524 4.295119 GGGGCGTCACACGTGTCT 62.295 66.667 20.49 0.00 44.73 3.41
2431 2525 2.646719 GGGCGTCACACGTGTCTA 59.353 61.111 20.49 7.25 44.73 2.59
2432 2526 1.731969 GGGCGTCACACGTGTCTAC 60.732 63.158 20.49 18.35 44.73 2.59
2433 2527 1.285023 GGCGTCACACGTGTCTACT 59.715 57.895 20.49 0.00 44.73 2.57
2434 2528 0.518636 GGCGTCACACGTGTCTACTA 59.481 55.000 20.49 0.00 44.73 1.82
2435 2529 1.131883 GGCGTCACACGTGTCTACTAT 59.868 52.381 20.49 0.00 44.73 2.12
2436 2530 2.174764 GCGTCACACGTGTCTACTATG 58.825 52.381 20.49 5.93 44.73 2.23
2437 2531 2.159612 GCGTCACACGTGTCTACTATGA 60.160 50.000 20.49 8.54 44.73 2.15
2438 2532 3.671256 CGTCACACGTGTCTACTATGAG 58.329 50.000 20.49 4.23 36.74 2.90
2439 2533 3.124806 CGTCACACGTGTCTACTATGAGT 59.875 47.826 20.49 0.00 36.74 3.41
2440 2534 4.378149 CGTCACACGTGTCTACTATGAGTT 60.378 45.833 20.49 0.00 36.74 3.01
2441 2535 5.458891 GTCACACGTGTCTACTATGAGTTT 58.541 41.667 20.49 0.00 0.00 2.66
2442 2536 5.568296 GTCACACGTGTCTACTATGAGTTTC 59.432 44.000 20.49 0.00 0.00 2.78
2443 2537 5.239963 TCACACGTGTCTACTATGAGTTTCA 59.760 40.000 20.49 0.00 0.00 2.69
2444 2538 6.072119 TCACACGTGTCTACTATGAGTTTCAT 60.072 38.462 20.49 0.00 40.72 2.57
2445 2539 6.033937 CACACGTGTCTACTATGAGTTTCATG 59.966 42.308 20.49 0.00 37.70 3.07
2446 2540 6.093404 CACGTGTCTACTATGAGTTTCATGT 58.907 40.000 7.58 1.85 37.70 3.21
2447 2541 6.586463 CACGTGTCTACTATGAGTTTCATGTT 59.414 38.462 7.58 0.00 37.70 2.71
2448 2542 7.116376 CACGTGTCTACTATGAGTTTCATGTTT 59.884 37.037 7.58 0.00 37.70 2.83
2449 2543 7.116376 ACGTGTCTACTATGAGTTTCATGTTTG 59.884 37.037 1.94 0.00 37.70 2.93
2450 2544 7.411912 CGTGTCTACTATGAGTTTCATGTTTGG 60.412 40.741 1.94 0.00 37.70 3.28
2451 2545 7.387948 GTGTCTACTATGAGTTTCATGTTTGGT 59.612 37.037 1.94 0.00 37.70 3.67
2452 2546 7.387673 TGTCTACTATGAGTTTCATGTTTGGTG 59.612 37.037 1.94 0.00 37.70 4.17
2453 2547 5.376854 ACTATGAGTTTCATGTTTGGTGC 57.623 39.130 1.94 0.00 37.70 5.01
2454 2548 4.826733 ACTATGAGTTTCATGTTTGGTGCA 59.173 37.500 1.94 0.00 37.70 4.57
2455 2549 4.669206 ATGAGTTTCATGTTTGGTGCAA 57.331 36.364 0.00 0.00 35.43 4.08
2456 2550 4.462508 TGAGTTTCATGTTTGGTGCAAA 57.537 36.364 0.00 0.00 0.00 3.68
2469 2563 5.344743 TTGGTGCAAACAAACATAAAGGA 57.655 34.783 2.84 0.00 0.00 3.36
2470 2564 4.942852 TGGTGCAAACAAACATAAAGGAG 58.057 39.130 0.00 0.00 0.00 3.69
2471 2565 3.740832 GGTGCAAACAAACATAAAGGAGC 59.259 43.478 0.00 0.00 0.00 4.70
2472 2566 3.740832 GTGCAAACAAACATAAAGGAGCC 59.259 43.478 0.00 0.00 0.00 4.70
2473 2567 3.386078 TGCAAACAAACATAAAGGAGCCA 59.614 39.130 0.00 0.00 0.00 4.75
2474 2568 4.040217 TGCAAACAAACATAAAGGAGCCAT 59.960 37.500 0.00 0.00 0.00 4.40
2475 2569 4.996758 GCAAACAAACATAAAGGAGCCATT 59.003 37.500 0.00 0.00 0.00 3.16
2476 2570 6.162777 GCAAACAAACATAAAGGAGCCATTA 58.837 36.000 0.00 0.00 0.00 1.90
2477 2571 6.818142 GCAAACAAACATAAAGGAGCCATTAT 59.182 34.615 0.00 0.00 0.00 1.28
2478 2572 7.010460 GCAAACAAACATAAAGGAGCCATTATC 59.990 37.037 0.00 0.00 0.00 1.75
2479 2573 7.961326 AACAAACATAAAGGAGCCATTATCT 57.039 32.000 0.00 0.00 0.00 1.98
2480 2574 7.961326 ACAAACATAAAGGAGCCATTATCTT 57.039 32.000 0.00 0.00 0.00 2.40
2481 2575 8.366359 ACAAACATAAAGGAGCCATTATCTTT 57.634 30.769 0.00 0.00 34.37 2.52
2482 2576 9.474313 ACAAACATAAAGGAGCCATTATCTTTA 57.526 29.630 0.00 0.00 36.52 1.85
2516 2610 9.535170 ACTAAAGCTATTATCTACCTGCTATCA 57.465 33.333 0.00 0.00 0.00 2.15
2519 2613 9.664332 AAAGCTATTATCTACCTGCTATCATTG 57.336 33.333 0.00 0.00 0.00 2.82
2520 2614 7.790027 AGCTATTATCTACCTGCTATCATTGG 58.210 38.462 0.00 0.00 0.00 3.16
2521 2615 7.401493 AGCTATTATCTACCTGCTATCATTGGT 59.599 37.037 0.00 0.00 36.66 3.67
2522 2616 8.043710 GCTATTATCTACCTGCTATCATTGGTT 58.956 37.037 0.00 0.00 34.33 3.67
2523 2617 9.950496 CTATTATCTACCTGCTATCATTGGTTT 57.050 33.333 0.00 0.00 34.33 3.27
2525 2619 6.949352 ATCTACCTGCTATCATTGGTTTTG 57.051 37.500 0.00 0.00 34.33 2.44
2526 2620 5.192927 TCTACCTGCTATCATTGGTTTTGG 58.807 41.667 0.00 0.00 34.33 3.28
2527 2621 3.099141 ACCTGCTATCATTGGTTTTGGG 58.901 45.455 0.00 0.00 0.00 4.12
2528 2622 3.099141 CCTGCTATCATTGGTTTTGGGT 58.901 45.455 0.00 0.00 0.00 4.51
2529 2623 3.131046 CCTGCTATCATTGGTTTTGGGTC 59.869 47.826 0.00 0.00 0.00 4.46
2530 2624 4.019174 CTGCTATCATTGGTTTTGGGTCT 58.981 43.478 0.00 0.00 0.00 3.85
2531 2625 3.763360 TGCTATCATTGGTTTTGGGTCTG 59.237 43.478 0.00 0.00 0.00 3.51
2532 2626 3.763897 GCTATCATTGGTTTTGGGTCTGT 59.236 43.478 0.00 0.00 0.00 3.41
2533 2627 4.142381 GCTATCATTGGTTTTGGGTCTGTC 60.142 45.833 0.00 0.00 0.00 3.51
2534 2628 2.593026 TCATTGGTTTTGGGTCTGTCC 58.407 47.619 0.00 0.00 0.00 4.02
2535 2629 2.091610 TCATTGGTTTTGGGTCTGTCCA 60.092 45.455 0.00 0.00 38.11 4.02
2536 2630 1.770294 TTGGTTTTGGGTCTGTCCAC 58.230 50.000 0.00 0.00 36.38 4.02
2537 2631 0.626382 TGGTTTTGGGTCTGTCCACA 59.374 50.000 0.00 0.00 36.38 4.17
2538 2632 1.029681 GGTTTTGGGTCTGTCCACAC 58.970 55.000 0.00 0.00 36.38 3.82
2539 2633 1.409661 GGTTTTGGGTCTGTCCACACT 60.410 52.381 0.00 0.00 36.38 3.55
2540 2634 2.375146 GTTTTGGGTCTGTCCACACTT 58.625 47.619 0.00 0.00 36.38 3.16
2541 2635 2.758423 GTTTTGGGTCTGTCCACACTTT 59.242 45.455 0.00 0.00 36.38 2.66
2542 2636 2.051334 TTGGGTCTGTCCACACTTTG 57.949 50.000 0.00 0.00 36.38 2.77
2543 2637 0.465460 TGGGTCTGTCCACACTTTGC 60.465 55.000 0.00 0.00 38.11 3.68
2544 2638 0.179018 GGGTCTGTCCACACTTTGCT 60.179 55.000 0.00 0.00 38.11 3.91
2545 2639 1.071699 GGGTCTGTCCACACTTTGCTA 59.928 52.381 0.00 0.00 38.11 3.49
2546 2640 2.143925 GGTCTGTCCACACTTTGCTAC 58.856 52.381 0.00 0.00 35.97 3.58
2547 2641 2.143925 GTCTGTCCACACTTTGCTACC 58.856 52.381 0.00 0.00 0.00 3.18
2548 2642 1.765904 TCTGTCCACACTTTGCTACCA 59.234 47.619 0.00 0.00 0.00 3.25
2549 2643 2.371841 TCTGTCCACACTTTGCTACCAT 59.628 45.455 0.00 0.00 0.00 3.55
2550 2644 2.744202 CTGTCCACACTTTGCTACCATC 59.256 50.000 0.00 0.00 0.00 3.51
2551 2645 2.105649 TGTCCACACTTTGCTACCATCA 59.894 45.455 0.00 0.00 0.00 3.07
2552 2646 2.484264 GTCCACACTTTGCTACCATCAC 59.516 50.000 0.00 0.00 0.00 3.06
2553 2647 2.371841 TCCACACTTTGCTACCATCACT 59.628 45.455 0.00 0.00 0.00 3.41
2554 2648 3.149196 CCACACTTTGCTACCATCACTT 58.851 45.455 0.00 0.00 0.00 3.16
2555 2649 3.569701 CCACACTTTGCTACCATCACTTT 59.430 43.478 0.00 0.00 0.00 2.66
2556 2650 4.539870 CACACTTTGCTACCATCACTTTG 58.460 43.478 0.00 0.00 0.00 2.77
2557 2651 3.569701 ACACTTTGCTACCATCACTTTGG 59.430 43.478 0.00 0.00 42.82 3.28
2558 2652 3.820467 CACTTTGCTACCATCACTTTGGA 59.180 43.478 0.00 0.00 39.25 3.53
2559 2653 4.460382 CACTTTGCTACCATCACTTTGGAT 59.540 41.667 0.00 0.00 39.25 3.41
2560 2654 5.047802 CACTTTGCTACCATCACTTTGGATT 60.048 40.000 0.00 0.00 39.25 3.01
2561 2655 5.539955 ACTTTGCTACCATCACTTTGGATTT 59.460 36.000 0.00 0.00 39.25 2.17
2562 2656 5.389859 TTGCTACCATCACTTTGGATTTG 57.610 39.130 0.00 0.00 39.25 2.32
2563 2657 4.406456 TGCTACCATCACTTTGGATTTGT 58.594 39.130 0.00 0.00 39.25 2.83
2564 2658 4.218200 TGCTACCATCACTTTGGATTTGTG 59.782 41.667 0.00 0.00 39.25 3.33
2565 2659 3.665745 ACCATCACTTTGGATTTGTGC 57.334 42.857 0.00 0.00 39.25 4.57
2566 2660 2.964464 ACCATCACTTTGGATTTGTGCA 59.036 40.909 0.00 0.00 39.25 4.57
2567 2661 3.579586 ACCATCACTTTGGATTTGTGCAT 59.420 39.130 0.00 0.00 39.25 3.96
2568 2662 3.930229 CCATCACTTTGGATTTGTGCATG 59.070 43.478 0.00 0.00 39.25 4.06
2569 2663 4.561938 CCATCACTTTGGATTTGTGCATGT 60.562 41.667 0.00 0.00 39.25 3.21
2570 2664 5.336610 CCATCACTTTGGATTTGTGCATGTA 60.337 40.000 0.00 0.00 39.25 2.29
2571 2665 5.375417 TCACTTTGGATTTGTGCATGTAG 57.625 39.130 0.00 0.00 0.00 2.74
2572 2666 5.069318 TCACTTTGGATTTGTGCATGTAGA 58.931 37.500 0.00 0.00 0.00 2.59
2573 2667 5.048782 TCACTTTGGATTTGTGCATGTAGAC 60.049 40.000 0.00 0.00 0.00 2.59
2574 2668 4.083324 ACTTTGGATTTGTGCATGTAGACG 60.083 41.667 0.00 0.00 0.00 4.18
2575 2669 3.052455 TGGATTTGTGCATGTAGACGT 57.948 42.857 0.00 0.00 0.00 4.34
2576 2670 3.000041 TGGATTTGTGCATGTAGACGTC 59.000 45.455 7.70 7.70 0.00 4.34
2577 2671 2.029244 GGATTTGTGCATGTAGACGTCG 59.971 50.000 10.46 0.00 0.00 5.12
2578 2672 0.787787 TTTGTGCATGTAGACGTCGC 59.212 50.000 10.46 7.69 0.00 5.19
2579 2673 0.038618 TTGTGCATGTAGACGTCGCT 60.039 50.000 10.46 0.00 0.00 4.93
2580 2674 0.456142 TGTGCATGTAGACGTCGCTC 60.456 55.000 10.46 8.53 0.00 5.03
2581 2675 1.138883 TGCATGTAGACGTCGCTCC 59.861 57.895 10.46 0.00 0.00 4.70
2582 2676 1.138883 GCATGTAGACGTCGCTCCA 59.861 57.895 10.46 5.96 0.00 3.86
2583 2677 0.249073 GCATGTAGACGTCGCTCCAT 60.249 55.000 10.46 8.05 0.00 3.41
2584 2678 1.481240 CATGTAGACGTCGCTCCATG 58.519 55.000 10.46 15.60 0.00 3.66
2585 2679 0.385751 ATGTAGACGTCGCTCCATGG 59.614 55.000 10.46 4.97 0.00 3.66
2586 2680 0.963856 TGTAGACGTCGCTCCATGGT 60.964 55.000 12.58 0.00 0.00 3.55
2587 2681 1.019673 GTAGACGTCGCTCCATGGTA 58.980 55.000 12.58 0.00 0.00 3.25
2588 2682 1.002684 GTAGACGTCGCTCCATGGTAG 60.003 57.143 12.58 9.13 0.00 3.18
2589 2683 1.065928 GACGTCGCTCCATGGTAGG 59.934 63.158 12.58 4.75 0.00 3.18
2590 2684 2.279517 CGTCGCTCCATGGTAGGC 60.280 66.667 12.58 13.47 0.00 3.93
2592 2686 4.221422 TCGCTCCATGGTAGGCGC 62.221 66.667 29.51 17.82 45.97 6.53
2593 2687 4.529219 CGCTCCATGGTAGGCGCA 62.529 66.667 25.98 2.33 39.32 6.09
2594 2688 2.124736 GCTCCATGGTAGGCGCAA 60.125 61.111 12.58 0.00 39.18 4.85
2595 2689 1.748879 GCTCCATGGTAGGCGCAAA 60.749 57.895 12.58 0.00 39.18 3.68
2596 2690 1.718757 GCTCCATGGTAGGCGCAAAG 61.719 60.000 12.58 0.00 39.18 2.77
2597 2691 1.077787 TCCATGGTAGGCGCAAAGG 60.078 57.895 12.58 0.39 0.00 3.11
2607 2701 3.373565 CGCAAAGGCAACCCCCTC 61.374 66.667 0.00 0.00 41.24 4.30
2608 2702 2.997315 GCAAAGGCAACCCCCTCC 60.997 66.667 0.00 0.00 40.72 4.30
2609 2703 2.525592 CAAAGGCAACCCCCTCCA 59.474 61.111 0.00 0.00 32.93 3.86
2610 2704 1.908299 CAAAGGCAACCCCCTCCAC 60.908 63.158 0.00 0.00 32.93 4.02
2611 2705 3.160478 AAAGGCAACCCCCTCCACC 62.160 63.158 0.00 0.00 32.93 4.61
2614 2708 3.672503 GCAACCCCCTCCACCCAT 61.673 66.667 0.00 0.00 0.00 4.00
2615 2709 3.190349 CAACCCCCTCCACCCATT 58.810 61.111 0.00 0.00 0.00 3.16
2616 2710 1.469251 CAACCCCCTCCACCCATTT 59.531 57.895 0.00 0.00 0.00 2.32
2617 2711 0.614697 CAACCCCCTCCACCCATTTC 60.615 60.000 0.00 0.00 0.00 2.17
2618 2712 2.150014 AACCCCCTCCACCCATTTCG 62.150 60.000 0.00 0.00 0.00 3.46
2619 2713 2.275418 CCCCTCCACCCATTTCGG 59.725 66.667 0.00 0.00 0.00 4.30
2620 2714 2.305607 CCCCTCCACCCATTTCGGA 61.306 63.158 0.00 0.00 36.56 4.55
2621 2715 1.645402 CCCCTCCACCCATTTCGGAT 61.645 60.000 0.00 0.00 36.56 4.18
2622 2716 0.258774 CCCTCCACCCATTTCGGATT 59.741 55.000 0.00 0.00 36.56 3.01
2623 2717 1.392589 CCTCCACCCATTTCGGATTG 58.607 55.000 0.00 0.00 36.56 2.67
2624 2718 1.340991 CCTCCACCCATTTCGGATTGT 60.341 52.381 0.00 0.00 36.56 2.71
2625 2719 2.092646 CCTCCACCCATTTCGGATTGTA 60.093 50.000 0.00 0.00 36.56 2.41
2626 2720 3.616219 CTCCACCCATTTCGGATTGTAA 58.384 45.455 0.00 0.00 36.56 2.41
2627 2721 4.207165 CTCCACCCATTTCGGATTGTAAT 58.793 43.478 0.00 0.00 36.56 1.89
2628 2722 4.204012 TCCACCCATTTCGGATTGTAATC 58.796 43.478 0.00 0.00 36.56 1.75
2629 2723 3.951037 CCACCCATTTCGGATTGTAATCA 59.049 43.478 6.90 0.00 37.15 2.57
2630 2724 4.400884 CCACCCATTTCGGATTGTAATCAA 59.599 41.667 6.90 0.00 37.15 2.57
2631 2725 5.450412 CCACCCATTTCGGATTGTAATCAAG 60.450 44.000 6.90 1.08 37.15 3.02
2632 2726 5.356751 CACCCATTTCGGATTGTAATCAAGA 59.643 40.000 6.90 3.20 37.15 3.02
2633 2727 5.590259 ACCCATTTCGGATTGTAATCAAGAG 59.410 40.000 6.90 0.00 37.15 2.85
2634 2728 5.009010 CCCATTTCGGATTGTAATCAAGAGG 59.991 44.000 6.90 4.07 37.15 3.69
2635 2729 5.822519 CCATTTCGGATTGTAATCAAGAGGA 59.177 40.000 6.90 0.71 37.15 3.71
2636 2730 6.318648 CCATTTCGGATTGTAATCAAGAGGAA 59.681 38.462 6.90 0.54 37.15 3.36
2637 2731 6.985188 TTTCGGATTGTAATCAAGAGGAAG 57.015 37.500 6.90 0.00 37.15 3.46
2638 2732 5.932619 TCGGATTGTAATCAAGAGGAAGA 57.067 39.130 6.90 0.00 37.15 2.87
2639 2733 6.485830 TCGGATTGTAATCAAGAGGAAGAT 57.514 37.500 6.90 0.00 37.15 2.40
2640 2734 7.597288 TCGGATTGTAATCAAGAGGAAGATA 57.403 36.000 6.90 0.00 37.15 1.98
2641 2735 8.018537 TCGGATTGTAATCAAGAGGAAGATAA 57.981 34.615 6.90 0.00 37.15 1.75
2642 2736 7.926555 TCGGATTGTAATCAAGAGGAAGATAAC 59.073 37.037 6.90 0.00 37.15 1.89
2643 2737 7.928706 CGGATTGTAATCAAGAGGAAGATAACT 59.071 37.037 6.90 0.00 37.15 2.24
2644 2738 9.050601 GGATTGTAATCAAGAGGAAGATAACTG 57.949 37.037 6.90 0.00 37.15 3.16
2645 2739 9.606631 GATTGTAATCAAGAGGAAGATAACTGT 57.393 33.333 0.00 0.00 36.97 3.55
2646 2740 9.965902 ATTGTAATCAAGAGGAAGATAACTGTT 57.034 29.630 0.00 0.00 36.97 3.16
2647 2741 9.436957 TTGTAATCAAGAGGAAGATAACTGTTC 57.563 33.333 0.00 0.00 0.00 3.18
2648 2742 8.816894 TGTAATCAAGAGGAAGATAACTGTTCT 58.183 33.333 0.00 0.00 0.00 3.01
2649 2743 9.092876 GTAATCAAGAGGAAGATAACTGTTCTG 57.907 37.037 0.00 0.00 0.00 3.02
2650 2744 6.918067 TCAAGAGGAAGATAACTGTTCTGA 57.082 37.500 0.00 0.00 0.00 3.27
2651 2745 6.929625 TCAAGAGGAAGATAACTGTTCTGAG 58.070 40.000 0.00 0.00 0.00 3.35
2652 2746 5.930837 AGAGGAAGATAACTGTTCTGAGG 57.069 43.478 0.00 0.00 0.00 3.86
2653 2747 4.714308 AGAGGAAGATAACTGTTCTGAGGG 59.286 45.833 0.00 0.00 0.00 4.30
2654 2748 3.777522 AGGAAGATAACTGTTCTGAGGGG 59.222 47.826 0.00 0.00 0.00 4.79
2655 2749 3.118223 GGAAGATAACTGTTCTGAGGGGG 60.118 52.174 0.00 0.00 0.00 5.40
2656 2750 3.491766 AGATAACTGTTCTGAGGGGGA 57.508 47.619 0.00 0.00 0.00 4.81
2657 2751 4.014273 AGATAACTGTTCTGAGGGGGAT 57.986 45.455 0.00 0.00 0.00 3.85
2658 2752 4.375313 AGATAACTGTTCTGAGGGGGATT 58.625 43.478 0.00 0.00 0.00 3.01
2659 2753 4.410555 AGATAACTGTTCTGAGGGGGATTC 59.589 45.833 0.00 0.00 0.00 2.52
2660 2754 2.044793 ACTGTTCTGAGGGGGATTCA 57.955 50.000 0.00 0.00 0.00 2.57
2661 2755 1.912043 ACTGTTCTGAGGGGGATTCAG 59.088 52.381 0.00 0.00 42.68 3.02
2662 2756 2.191400 CTGTTCTGAGGGGGATTCAGA 58.809 52.381 1.07 1.07 46.85 3.27
2665 2759 1.885049 TCTGAGGGGGATTCAGAAGG 58.115 55.000 2.67 0.00 45.87 3.46
2666 2760 1.366082 TCTGAGGGGGATTCAGAAGGA 59.634 52.381 2.67 0.00 45.87 3.36
2667 2761 1.767681 CTGAGGGGGATTCAGAAGGAG 59.232 57.143 0.00 0.00 43.75 3.69
2668 2762 1.366082 TGAGGGGGATTCAGAAGGAGA 59.634 52.381 0.00 0.00 0.00 3.71
2669 2763 2.225882 TGAGGGGGATTCAGAAGGAGAA 60.226 50.000 0.00 0.00 0.00 2.87
2670 2764 2.437651 GAGGGGGATTCAGAAGGAGAAG 59.562 54.545 0.00 0.00 0.00 2.85
2671 2765 2.046447 AGGGGGATTCAGAAGGAGAAGA 59.954 50.000 0.00 0.00 0.00 2.87
2672 2766 2.171659 GGGGGATTCAGAAGGAGAAGAC 59.828 54.545 0.00 0.00 0.00 3.01
2673 2767 2.171659 GGGGATTCAGAAGGAGAAGACC 59.828 54.545 0.00 0.00 0.00 3.85
2674 2768 2.840651 GGGATTCAGAAGGAGAAGACCA 59.159 50.000 0.00 0.00 31.52 4.02
2675 2769 3.369997 GGGATTCAGAAGGAGAAGACCAC 60.370 52.174 0.00 0.00 31.52 4.16
2676 2770 3.517500 GGATTCAGAAGGAGAAGACCACT 59.482 47.826 0.00 0.00 0.00 4.00
2677 2771 4.382577 GGATTCAGAAGGAGAAGACCACTC 60.383 50.000 0.00 0.00 0.00 3.51
2686 2780 4.987408 GAGAAGACCACTCCTAGTTACC 57.013 50.000 0.00 0.00 0.00 2.85
2687 2781 3.700539 GAGAAGACCACTCCTAGTTACCC 59.299 52.174 0.00 0.00 0.00 3.69
2688 2782 2.546652 AGACCACTCCTAGTTACCCC 57.453 55.000 0.00 0.00 0.00 4.95
2689 2783 1.008084 AGACCACTCCTAGTTACCCCC 59.992 57.143 0.00 0.00 0.00 5.40
2690 2784 1.008084 GACCACTCCTAGTTACCCCCT 59.992 57.143 0.00 0.00 0.00 4.79
2691 2785 1.439944 ACCACTCCTAGTTACCCCCTT 59.560 52.381 0.00 0.00 0.00 3.95
2692 2786 2.661593 ACCACTCCTAGTTACCCCCTTA 59.338 50.000 0.00 0.00 0.00 2.69
2693 2787 3.306613 CCACTCCTAGTTACCCCCTTAG 58.693 54.545 0.00 0.00 0.00 2.18
2694 2788 3.306613 CACTCCTAGTTACCCCCTTAGG 58.693 54.545 0.00 0.00 0.00 2.69
2695 2789 2.938648 ACTCCTAGTTACCCCCTTAGGT 59.061 50.000 0.00 0.00 44.37 3.08
2696 2790 3.052262 ACTCCTAGTTACCCCCTTAGGTC 60.052 52.174 0.00 0.00 41.58 3.85
2697 2791 3.207093 CTCCTAGTTACCCCCTTAGGTCT 59.793 52.174 0.00 0.00 41.58 3.85
2698 2792 3.604312 TCCTAGTTACCCCCTTAGGTCTT 59.396 47.826 0.00 0.00 41.58 3.01
2699 2793 4.047655 TCCTAGTTACCCCCTTAGGTCTTT 59.952 45.833 0.00 0.00 41.58 2.52
2700 2794 4.163649 CCTAGTTACCCCCTTAGGTCTTTG 59.836 50.000 0.00 0.00 41.58 2.77
2701 2795 2.307980 AGTTACCCCCTTAGGTCTTTGC 59.692 50.000 0.00 0.00 41.58 3.68
2702 2796 2.307980 GTTACCCCCTTAGGTCTTTGCT 59.692 50.000 0.00 0.00 41.58 3.91
2703 2797 0.992695 ACCCCCTTAGGTCTTTGCTC 59.007 55.000 0.00 0.00 33.81 4.26
2704 2798 1.290134 CCCCCTTAGGTCTTTGCTCT 58.710 55.000 0.00 0.00 0.00 4.09
2705 2799 2.225805 ACCCCCTTAGGTCTTTGCTCTA 60.226 50.000 0.00 0.00 33.81 2.43
2706 2800 2.844348 CCCCCTTAGGTCTTTGCTCTAA 59.156 50.000 0.00 0.00 0.00 2.10
2707 2801 3.370633 CCCCCTTAGGTCTTTGCTCTAAC 60.371 52.174 0.00 0.00 0.00 2.34
2708 2802 3.519913 CCCCTTAGGTCTTTGCTCTAACT 59.480 47.826 0.00 0.00 0.00 2.24
2709 2803 4.019231 CCCCTTAGGTCTTTGCTCTAACTT 60.019 45.833 0.00 0.00 0.00 2.66
2710 2804 4.938226 CCCTTAGGTCTTTGCTCTAACTTG 59.062 45.833 0.00 0.00 0.00 3.16
2711 2805 4.938226 CCTTAGGTCTTTGCTCTAACTTGG 59.062 45.833 0.00 0.00 0.00 3.61
2712 2806 2.784347 AGGTCTTTGCTCTAACTTGGC 58.216 47.619 0.00 0.00 0.00 4.52
2713 2807 2.106511 AGGTCTTTGCTCTAACTTGGCA 59.893 45.455 0.00 0.00 0.00 4.92
2714 2808 2.485814 GGTCTTTGCTCTAACTTGGCAG 59.514 50.000 0.00 0.00 37.28 4.85
2715 2809 2.485814 GTCTTTGCTCTAACTTGGCAGG 59.514 50.000 0.00 0.00 37.28 4.85
2716 2810 1.200948 CTTTGCTCTAACTTGGCAGGC 59.799 52.381 0.00 0.00 37.28 4.85
2717 2811 0.401738 TTGCTCTAACTTGGCAGGCT 59.598 50.000 0.00 0.00 37.28 4.58
2718 2812 1.275666 TGCTCTAACTTGGCAGGCTA 58.724 50.000 0.00 0.00 0.00 3.93
2719 2813 1.628340 TGCTCTAACTTGGCAGGCTAA 59.372 47.619 0.00 0.00 0.00 3.09
2720 2814 2.239654 TGCTCTAACTTGGCAGGCTAAT 59.760 45.455 0.00 0.00 0.00 1.73
2721 2815 2.615912 GCTCTAACTTGGCAGGCTAATG 59.384 50.000 0.00 0.00 0.00 1.90
2722 2816 3.878778 CTCTAACTTGGCAGGCTAATGT 58.121 45.455 0.00 0.00 0.00 2.71
2723 2817 4.265073 CTCTAACTTGGCAGGCTAATGTT 58.735 43.478 0.00 9.01 0.00 2.71
2724 2818 4.009675 TCTAACTTGGCAGGCTAATGTTG 58.990 43.478 0.00 6.05 0.00 3.33
2725 2819 1.549203 ACTTGGCAGGCTAATGTTGG 58.451 50.000 0.00 0.00 0.00 3.77
2726 2820 1.203050 ACTTGGCAGGCTAATGTTGGT 60.203 47.619 0.00 0.00 0.00 3.67
2727 2821 2.041081 ACTTGGCAGGCTAATGTTGGTA 59.959 45.455 0.00 0.00 0.00 3.25
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 8.930760 CCGAAATTATTTTTGTTATTTCCAGCA 58.069 29.630 0.00 0.00 34.89 4.41
28 30 9.777297 CATATGGGGATTTTTCCGAAATTATTT 57.223 29.630 0.00 0.00 0.00 1.40
36 41 3.304911 TGCATATGGGGATTTTTCCGA 57.695 42.857 4.56 0.00 0.00 4.55
181 189 3.307480 CCCTTTCTTTCTACCACGGTGAT 60.307 47.826 10.28 0.00 0.00 3.06
246 256 3.319755 TCAATCGAGTTACCGGAACAAC 58.680 45.455 9.46 9.41 40.86 3.32
247 257 3.663995 TCAATCGAGTTACCGGAACAA 57.336 42.857 9.46 0.00 40.86 2.83
248 258 3.663995 TTCAATCGAGTTACCGGAACA 57.336 42.857 9.46 0.00 40.86 3.18
400 425 3.430333 TGCTTGCGATGTACGAGATAA 57.570 42.857 0.00 0.00 45.77 1.75
401 426 3.643159 ATGCTTGCGATGTACGAGATA 57.357 42.857 0.00 0.00 45.77 1.98
443 468 1.826720 ACTTCGAAGGTATAACCGCCA 59.173 47.619 27.86 0.00 44.90 5.69
469 494 2.511545 GAACCCGAACCGTCCCGAAT 62.512 60.000 0.00 0.00 0.00 3.34
521 546 4.189188 CTACCCTCGCCGTGGACG 62.189 72.222 6.80 0.00 39.44 4.79
620 646 4.766373 TCTATGAACCGTGTACAACTACCA 59.234 41.667 0.00 0.00 0.00 3.25
651 677 2.069273 GTCAAGTTCCTCACCATGACG 58.931 52.381 0.00 0.00 34.67 4.35
694 720 1.404391 GACGACTCGTGGACCATGTAT 59.596 52.381 9.27 3.05 41.37 2.29
748 774 0.748005 CGCCAAGTACCCCTTCATGG 60.748 60.000 0.00 0.00 0.00 3.66
813 839 1.451387 GCCAAGTACCCATGGACGG 60.451 63.158 15.22 3.26 39.12 4.79
830 856 2.300042 TGCGTTTCGTTTCGTTATTGC 58.700 42.857 0.00 0.00 0.00 3.56
835 861 1.064357 ACCATTGCGTTTCGTTTCGTT 59.936 42.857 0.00 0.00 0.00 3.85
848 874 3.128589 CCATGTACCACTACAACCATTGC 59.871 47.826 0.00 0.00 36.43 3.56
937 966 2.624437 GATCGGCAGGTACCACGACC 62.624 65.000 22.82 13.66 38.24 4.79
948 978 1.212616 GGATTCACGAAGATCGGCAG 58.787 55.000 4.66 0.00 45.59 4.85
959 989 1.336887 ACCGAGACACTTGGATTCACG 60.337 52.381 11.48 0.00 37.20 4.35
1176 1215 2.508586 GAACGAGGAGTCCAGCACCC 62.509 65.000 12.86 0.00 0.00 4.61
1208 1247 4.087892 TTCCTCCTGCTGCTCGGC 62.088 66.667 0.00 0.00 0.00 5.54
1306 1345 4.133796 GCCCCGTCATGGCTTTGC 62.134 66.667 0.00 0.00 45.70 3.68
1329 1368 1.343884 ACAGCTCCTCTGCCTTATCCT 60.344 52.381 0.00 0.00 46.76 3.24
1334 1373 2.977178 CGACAGCTCCTCTGCCTT 59.023 61.111 0.00 0.00 46.76 4.35
1353 1392 4.016706 CCCCTTCGCTCAACCCGT 62.017 66.667 0.00 0.00 0.00 5.28
1376 1416 2.746277 GCCGAGTCCAACGCCATT 60.746 61.111 0.00 0.00 0.00 3.16
1418 1458 1.333636 CCTCCCCTGCGTCAAGATCT 61.334 60.000 0.00 0.00 0.00 2.75
1468 1508 2.033602 GTGCCAGGGGTAAGCGTT 59.966 61.111 0.00 0.00 0.00 4.84
1611 1651 1.619975 TCCCCTCGTCTCCCTCTCT 60.620 63.158 0.00 0.00 0.00 3.10
1640 1680 1.617018 CCATCTCTCCCTCGCAACCA 61.617 60.000 0.00 0.00 0.00 3.67
1643 1683 2.066393 CCCCATCTCTCCCTCGCAA 61.066 63.158 0.00 0.00 0.00 4.85
1644 1684 2.317992 ATCCCCATCTCTCCCTCGCA 62.318 60.000 0.00 0.00 0.00 5.10
1645 1685 1.535202 ATCCCCATCTCTCCCTCGC 60.535 63.158 0.00 0.00 0.00 5.03
1646 1686 1.247419 CGATCCCCATCTCTCCCTCG 61.247 65.000 0.00 0.00 0.00 4.63
1647 1687 0.902516 CCGATCCCCATCTCTCCCTC 60.903 65.000 0.00 0.00 0.00 4.30
1648 1688 1.157276 CCGATCCCCATCTCTCCCT 59.843 63.158 0.00 0.00 0.00 4.20
1649 1689 1.915769 CCCGATCCCCATCTCTCCC 60.916 68.421 0.00 0.00 0.00 4.30
1650 1690 2.588201 GCCCGATCCCCATCTCTCC 61.588 68.421 0.00 0.00 0.00 3.71
1651 1691 1.535202 AGCCCGATCCCCATCTCTC 60.535 63.158 0.00 0.00 0.00 3.20
1652 1692 1.840650 CAGCCCGATCCCCATCTCT 60.841 63.158 0.00 0.00 0.00 3.10
1653 1693 1.410850 TTCAGCCCGATCCCCATCTC 61.411 60.000 0.00 0.00 0.00 2.75
1654 1694 1.384502 TTCAGCCCGATCCCCATCT 60.385 57.895 0.00 0.00 0.00 2.90
1655 1695 1.072159 CTTCAGCCCGATCCCCATC 59.928 63.158 0.00 0.00 0.00 3.51
1656 1696 2.455565 CCTTCAGCCCGATCCCCAT 61.456 63.158 0.00 0.00 0.00 4.00
1657 1697 3.089874 CCTTCAGCCCGATCCCCA 61.090 66.667 0.00 0.00 0.00 4.96
1658 1698 2.768344 TCCTTCAGCCCGATCCCC 60.768 66.667 0.00 0.00 0.00 4.81
1659 1699 2.034048 GACTCCTTCAGCCCGATCCC 62.034 65.000 0.00 0.00 0.00 3.85
1660 1700 1.045911 AGACTCCTTCAGCCCGATCC 61.046 60.000 0.00 0.00 0.00 3.36
1661 1701 0.103937 CAGACTCCTTCAGCCCGATC 59.896 60.000 0.00 0.00 0.00 3.69
1662 1702 1.333636 CCAGACTCCTTCAGCCCGAT 61.334 60.000 0.00 0.00 0.00 4.18
1663 1703 1.984570 CCAGACTCCTTCAGCCCGA 60.985 63.158 0.00 0.00 0.00 5.14
1664 1704 2.581354 CCAGACTCCTTCAGCCCG 59.419 66.667 0.00 0.00 0.00 6.13
1665 1705 2.270527 GCCAGACTCCTTCAGCCC 59.729 66.667 0.00 0.00 0.00 5.19
1666 1706 2.125350 CGCCAGACTCCTTCAGCC 60.125 66.667 0.00 0.00 0.00 4.85
1667 1707 2.125350 CCGCCAGACTCCTTCAGC 60.125 66.667 0.00 0.00 0.00 4.26
1668 1708 1.079543 CACCGCCAGACTCCTTCAG 60.080 63.158 0.00 0.00 0.00 3.02
1669 1709 3.059982 CACCGCCAGACTCCTTCA 58.940 61.111 0.00 0.00 0.00 3.02
1670 1710 2.435059 GCACCGCCAGACTCCTTC 60.435 66.667 0.00 0.00 0.00 3.46
1671 1711 4.379243 CGCACCGCCAGACTCCTT 62.379 66.667 0.00 0.00 0.00 3.36
1673 1713 4.803426 CTCGCACCGCCAGACTCC 62.803 72.222 0.00 0.00 0.00 3.85
1674 1714 4.803426 CCTCGCACCGCCAGACTC 62.803 72.222 0.00 0.00 0.00 3.36
1680 1720 4.593864 GATCTCCCTCGCACCGCC 62.594 72.222 0.00 0.00 0.00 6.13
1681 1721 4.933064 CGATCTCCCTCGCACCGC 62.933 72.222 0.00 0.00 0.00 5.68
1682 1722 2.669808 CTTCGATCTCCCTCGCACCG 62.670 65.000 0.00 0.00 38.52 4.94
1683 1723 1.066587 CTTCGATCTCCCTCGCACC 59.933 63.158 0.00 0.00 38.52 5.01
1684 1724 0.030101 CTCTTCGATCTCCCTCGCAC 59.970 60.000 0.00 0.00 38.52 5.34
1685 1725 0.107165 TCTCTTCGATCTCCCTCGCA 60.107 55.000 0.00 0.00 38.52 5.10
1686 1726 0.591170 CTCTCTTCGATCTCCCTCGC 59.409 60.000 0.00 0.00 38.52 5.03
1687 1727 1.234821 CCTCTCTTCGATCTCCCTCG 58.765 60.000 0.00 0.00 39.99 4.63
1688 1728 1.144093 TCCCTCTCTTCGATCTCCCTC 59.856 57.143 0.00 0.00 0.00 4.30
1689 1729 1.144913 CTCCCTCTCTTCGATCTCCCT 59.855 57.143 0.00 0.00 0.00 4.20
1690 1730 1.144093 TCTCCCTCTCTTCGATCTCCC 59.856 57.143 0.00 0.00 0.00 4.30
1691 1731 2.504367 CTCTCCCTCTCTTCGATCTCC 58.496 57.143 0.00 0.00 0.00 3.71
1692 1732 2.504367 CCTCTCCCTCTCTTCGATCTC 58.496 57.143 0.00 0.00 0.00 2.75
1693 1733 1.144913 CCCTCTCCCTCTCTTCGATCT 59.855 57.143 0.00 0.00 0.00 2.75
1694 1734 1.133606 ACCCTCTCCCTCTCTTCGATC 60.134 57.143 0.00 0.00 0.00 3.69
1695 1735 0.930726 ACCCTCTCCCTCTCTTCGAT 59.069 55.000 0.00 0.00 0.00 3.59
1696 1736 0.705253 AACCCTCTCCCTCTCTTCGA 59.295 55.000 0.00 0.00 0.00 3.71
1697 1737 1.107945 GAACCCTCTCCCTCTCTTCG 58.892 60.000 0.00 0.00 0.00 3.79
1698 1738 1.107945 CGAACCCTCTCCCTCTCTTC 58.892 60.000 0.00 0.00 0.00 2.87
1699 1739 0.705253 TCGAACCCTCTCCCTCTCTT 59.295 55.000 0.00 0.00 0.00 2.85
1700 1740 0.257616 CTCGAACCCTCTCCCTCTCT 59.742 60.000 0.00 0.00 0.00 3.10
1701 1741 1.388837 GCTCGAACCCTCTCCCTCTC 61.389 65.000 0.00 0.00 0.00 3.20
1702 1742 1.380650 GCTCGAACCCTCTCCCTCT 60.381 63.158 0.00 0.00 0.00 3.69
1703 1743 2.776913 CGCTCGAACCCTCTCCCTC 61.777 68.421 0.00 0.00 0.00 4.30
1704 1744 2.756283 CGCTCGAACCCTCTCCCT 60.756 66.667 0.00 0.00 0.00 4.20
1705 1745 3.839432 CCGCTCGAACCCTCTCCC 61.839 72.222 0.00 0.00 0.00 4.30
1706 1746 3.839432 CCCGCTCGAACCCTCTCC 61.839 72.222 0.00 0.00 0.00 3.71
1707 1747 2.128507 ATCCCGCTCGAACCCTCTC 61.129 63.158 0.00 0.00 0.00 3.20
1708 1748 2.042843 ATCCCGCTCGAACCCTCT 60.043 61.111 0.00 0.00 0.00 3.69
1709 1749 2.107141 CATCCCGCTCGAACCCTC 59.893 66.667 0.00 0.00 0.00 4.30
1710 1750 2.363795 TCATCCCGCTCGAACCCT 60.364 61.111 0.00 0.00 0.00 4.34
1711 1751 2.202892 GTCATCCCGCTCGAACCC 60.203 66.667 0.00 0.00 0.00 4.11
1712 1752 1.519455 CAGTCATCCCGCTCGAACC 60.519 63.158 0.00 0.00 0.00 3.62
1713 1753 2.167861 GCAGTCATCCCGCTCGAAC 61.168 63.158 0.00 0.00 0.00 3.95
1714 1754 2.184322 GCAGTCATCCCGCTCGAA 59.816 61.111 0.00 0.00 0.00 3.71
1715 1755 4.193334 CGCAGTCATCCCGCTCGA 62.193 66.667 0.00 0.00 0.00 4.04
1734 1774 0.105039 CTTCCTAACCCTAGCCGCAG 59.895 60.000 0.00 0.00 0.00 5.18
1735 1775 1.335132 CCTTCCTAACCCTAGCCGCA 61.335 60.000 0.00 0.00 0.00 5.69
1736 1776 1.446366 CCTTCCTAACCCTAGCCGC 59.554 63.158 0.00 0.00 0.00 6.53
1737 1777 2.041206 GCCCTTCCTAACCCTAGCCG 62.041 65.000 0.00 0.00 0.00 5.52
1738 1778 1.837789 GCCCTTCCTAACCCTAGCC 59.162 63.158 0.00 0.00 0.00 3.93
1739 1779 1.446366 CGCCCTTCCTAACCCTAGC 59.554 63.158 0.00 0.00 0.00 3.42
1740 1780 1.446366 GCGCCCTTCCTAACCCTAG 59.554 63.158 0.00 0.00 0.00 3.02
1741 1781 2.068213 GGCGCCCTTCCTAACCCTA 61.068 63.158 18.11 0.00 0.00 3.53
1742 1782 3.408853 GGCGCCCTTCCTAACCCT 61.409 66.667 18.11 0.00 0.00 4.34
1743 1783 4.851179 CGGCGCCCTTCCTAACCC 62.851 72.222 23.46 0.00 0.00 4.11
1744 1784 3.103091 ATCGGCGCCCTTCCTAACC 62.103 63.158 23.46 0.00 0.00 2.85
1745 1785 1.887707 CATCGGCGCCCTTCCTAAC 60.888 63.158 23.46 0.00 0.00 2.34
1746 1786 2.504032 CATCGGCGCCCTTCCTAA 59.496 61.111 23.46 0.00 0.00 2.69
1747 1787 3.546543 CCATCGGCGCCCTTCCTA 61.547 66.667 23.46 0.00 0.00 2.94
1767 1807 2.123295 GGCCCATTTGCCCCTAGG 60.123 66.667 0.06 0.06 46.11 3.02
1775 1815 1.077068 TAGAAGGCCGGCCCATTTG 60.077 57.895 41.72 0.00 36.58 2.32
1811 1856 3.655810 GAGAGCCCAGCCACGACTG 62.656 68.421 0.00 0.00 37.42 3.51
1814 1859 3.071206 GAGAGAGCCCAGCCACGA 61.071 66.667 0.00 0.00 0.00 4.35
1816 1861 1.675720 GAGAGAGAGAGCCCAGCCAC 61.676 65.000 0.00 0.00 0.00 5.01
1873 1931 1.006758 CCCTAACCCCCTTCCTTTTCC 59.993 57.143 0.00 0.00 0.00 3.13
1887 1951 5.416271 TCATGTCAAACTCTACCCCTAAC 57.584 43.478 0.00 0.00 0.00 2.34
1904 1969 7.004086 TGAGTCCAGAAAAATTAACCTCATGT 58.996 34.615 0.00 0.00 0.00 3.21
1945 2012 6.463995 TTTGCCACTTCTATTTTTCTGTGT 57.536 33.333 0.00 0.00 0.00 3.72
2231 2310 2.029838 ACCGAGAGAATTCACATGGC 57.970 50.000 8.44 0.00 0.00 4.40
2244 2323 5.943349 TCTTTGGTCCATATAAACCGAGA 57.057 39.130 0.00 7.15 38.45 4.04
2294 2377 8.984891 TCATACCAGCATGTCTTTTAATTTTG 57.015 30.769 0.00 0.00 0.00 2.44
2315 2399 2.894126 TGCATTGCATCATGCCATCATA 59.106 40.909 18.34 0.00 44.23 2.15
2369 2462 2.109128 TCCAGTAATTTGGTTGCCTCCA 59.891 45.455 0.00 0.00 39.35 3.86
2425 2519 7.387948 ACCAAACATGAAACTCATAGTAGACAC 59.612 37.037 0.00 0.00 34.28 3.67
2426 2520 7.387673 CACCAAACATGAAACTCATAGTAGACA 59.612 37.037 0.00 0.00 34.28 3.41
2427 2521 7.624344 GCACCAAACATGAAACTCATAGTAGAC 60.624 40.741 0.00 0.00 34.28 2.59
2428 2522 6.371548 GCACCAAACATGAAACTCATAGTAGA 59.628 38.462 0.00 0.00 34.28 2.59
2429 2523 6.149308 TGCACCAAACATGAAACTCATAGTAG 59.851 38.462 0.00 0.00 34.28 2.57
2430 2524 6.000840 TGCACCAAACATGAAACTCATAGTA 58.999 36.000 0.00 0.00 34.28 1.82
2431 2525 4.826733 TGCACCAAACATGAAACTCATAGT 59.173 37.500 0.00 0.00 34.28 2.12
2432 2526 5.375417 TGCACCAAACATGAAACTCATAG 57.625 39.130 0.00 0.00 34.28 2.23
2433 2527 5.781210 TTGCACCAAACATGAAACTCATA 57.219 34.783 0.00 0.00 34.28 2.15
2434 2528 4.669206 TTGCACCAAACATGAAACTCAT 57.331 36.364 0.00 0.00 37.65 2.90
2435 2529 4.462508 TTTGCACCAAACATGAAACTCA 57.537 36.364 0.00 0.00 0.00 3.41
2446 2540 5.734720 TCCTTTATGTTTGTTTGCACCAAA 58.265 33.333 6.63 6.63 0.00 3.28
2447 2541 5.344743 TCCTTTATGTTTGTTTGCACCAA 57.655 34.783 0.00 0.00 0.00 3.67
2448 2542 4.739137 GCTCCTTTATGTTTGTTTGCACCA 60.739 41.667 0.00 0.00 0.00 4.17
2449 2543 3.740832 GCTCCTTTATGTTTGTTTGCACC 59.259 43.478 0.00 0.00 0.00 5.01
2450 2544 3.740832 GGCTCCTTTATGTTTGTTTGCAC 59.259 43.478 0.00 0.00 0.00 4.57
2451 2545 3.386078 TGGCTCCTTTATGTTTGTTTGCA 59.614 39.130 0.00 0.00 0.00 4.08
2452 2546 3.988819 TGGCTCCTTTATGTTTGTTTGC 58.011 40.909 0.00 0.00 0.00 3.68
2453 2547 8.253113 AGATAATGGCTCCTTTATGTTTGTTTG 58.747 33.333 10.61 0.00 0.00 2.93
2454 2548 8.366359 AGATAATGGCTCCTTTATGTTTGTTT 57.634 30.769 10.61 0.00 0.00 2.83
2455 2549 7.961326 AGATAATGGCTCCTTTATGTTTGTT 57.039 32.000 10.61 0.00 0.00 2.83
2456 2550 7.961326 AAGATAATGGCTCCTTTATGTTTGT 57.039 32.000 10.61 0.00 30.81 2.83
2490 2584 9.535170 TGATAGCAGGTAGATAATAGCTTTAGT 57.465 33.333 0.00 0.00 33.83 2.24
2493 2587 9.664332 CAATGATAGCAGGTAGATAATAGCTTT 57.336 33.333 0.00 0.00 33.83 3.51
2494 2588 8.263640 CCAATGATAGCAGGTAGATAATAGCTT 58.736 37.037 0.00 0.00 33.83 3.74
2495 2589 7.401493 ACCAATGATAGCAGGTAGATAATAGCT 59.599 37.037 0.00 0.00 36.20 3.32
2496 2590 7.560368 ACCAATGATAGCAGGTAGATAATAGC 58.440 38.462 0.00 0.00 31.32 2.97
2497 2591 9.950496 AAACCAATGATAGCAGGTAGATAATAG 57.050 33.333 0.00 0.00 33.15 1.73
2499 2593 9.071276 CAAAACCAATGATAGCAGGTAGATAAT 57.929 33.333 0.00 0.00 33.15 1.28
2500 2594 7.502226 CCAAAACCAATGATAGCAGGTAGATAA 59.498 37.037 0.00 0.00 33.15 1.75
2501 2595 6.998074 CCAAAACCAATGATAGCAGGTAGATA 59.002 38.462 0.00 0.00 33.15 1.98
2502 2596 5.829924 CCAAAACCAATGATAGCAGGTAGAT 59.170 40.000 0.00 0.00 33.15 1.98
2503 2597 5.192927 CCAAAACCAATGATAGCAGGTAGA 58.807 41.667 0.00 0.00 33.15 2.59
2504 2598 4.339247 CCCAAAACCAATGATAGCAGGTAG 59.661 45.833 0.00 0.00 33.15 3.18
2505 2599 4.264172 ACCCAAAACCAATGATAGCAGGTA 60.264 41.667 0.00 0.00 33.15 3.08
2506 2600 3.099141 CCCAAAACCAATGATAGCAGGT 58.901 45.455 0.00 0.00 35.47 4.00
2507 2601 3.099141 ACCCAAAACCAATGATAGCAGG 58.901 45.455 0.00 0.00 0.00 4.85
2508 2602 4.019174 AGACCCAAAACCAATGATAGCAG 58.981 43.478 0.00 0.00 0.00 4.24
2509 2603 3.763360 CAGACCCAAAACCAATGATAGCA 59.237 43.478 0.00 0.00 0.00 3.49
2510 2604 3.763897 ACAGACCCAAAACCAATGATAGC 59.236 43.478 0.00 0.00 0.00 2.97
2511 2605 4.399303 GGACAGACCCAAAACCAATGATAG 59.601 45.833 0.00 0.00 0.00 2.08
2512 2606 4.202620 TGGACAGACCCAAAACCAATGATA 60.203 41.667 0.00 0.00 38.00 2.15
2513 2607 3.165071 GGACAGACCCAAAACCAATGAT 58.835 45.455 0.00 0.00 0.00 2.45
2514 2608 2.091610 TGGACAGACCCAAAACCAATGA 60.092 45.455 0.00 0.00 38.00 2.57
2515 2609 2.035832 GTGGACAGACCCAAAACCAATG 59.964 50.000 0.00 0.00 38.06 2.82
2516 2610 2.316108 GTGGACAGACCCAAAACCAAT 58.684 47.619 0.00 0.00 38.06 3.16
2517 2611 1.006043 TGTGGACAGACCCAAAACCAA 59.994 47.619 0.00 0.00 38.06 3.67
2518 2612 0.626382 TGTGGACAGACCCAAAACCA 59.374 50.000 0.00 0.00 38.06 3.67
2519 2613 1.029681 GTGTGGACAGACCCAAAACC 58.970 55.000 0.00 0.00 38.06 3.27
2520 2614 2.052782 AGTGTGGACAGACCCAAAAC 57.947 50.000 0.00 0.00 38.06 2.43
2521 2615 2.757868 CAAAGTGTGGACAGACCCAAAA 59.242 45.455 0.00 0.00 38.06 2.44
2522 2616 2.374184 CAAAGTGTGGACAGACCCAAA 58.626 47.619 0.00 0.00 38.06 3.28
2523 2617 2.021723 GCAAAGTGTGGACAGACCCAA 61.022 52.381 0.00 0.00 38.06 4.12
2524 2618 0.465460 GCAAAGTGTGGACAGACCCA 60.465 55.000 0.00 0.00 38.00 4.51
2525 2619 0.179018 AGCAAAGTGTGGACAGACCC 60.179 55.000 0.00 0.00 38.00 4.46
2526 2620 2.143925 GTAGCAAAGTGTGGACAGACC 58.856 52.381 0.00 0.00 39.54 3.85
2527 2621 2.143925 GGTAGCAAAGTGTGGACAGAC 58.856 52.381 0.00 0.00 0.00 3.51
2528 2622 1.765904 TGGTAGCAAAGTGTGGACAGA 59.234 47.619 0.00 0.00 0.00 3.41
2529 2623 2.254546 TGGTAGCAAAGTGTGGACAG 57.745 50.000 0.00 0.00 0.00 3.51
2530 2624 2.105649 TGATGGTAGCAAAGTGTGGACA 59.894 45.455 0.00 0.00 0.00 4.02
2531 2625 2.484264 GTGATGGTAGCAAAGTGTGGAC 59.516 50.000 0.00 0.00 0.00 4.02
2532 2626 2.371841 AGTGATGGTAGCAAAGTGTGGA 59.628 45.455 0.00 0.00 0.00 4.02
2533 2627 2.783135 AGTGATGGTAGCAAAGTGTGG 58.217 47.619 0.00 0.00 0.00 4.17
2534 2628 4.539870 CAAAGTGATGGTAGCAAAGTGTG 58.460 43.478 0.00 0.00 0.00 3.82
2535 2629 3.569701 CCAAAGTGATGGTAGCAAAGTGT 59.430 43.478 0.00 0.00 35.65 3.55
2536 2630 3.820467 TCCAAAGTGATGGTAGCAAAGTG 59.180 43.478 0.00 0.00 41.46 3.16
2537 2631 4.098914 TCCAAAGTGATGGTAGCAAAGT 57.901 40.909 0.00 0.00 41.46 2.66
2538 2632 5.649782 AATCCAAAGTGATGGTAGCAAAG 57.350 39.130 0.00 0.00 41.46 2.77
2539 2633 5.304101 ACAAATCCAAAGTGATGGTAGCAAA 59.696 36.000 0.00 0.00 41.46 3.68
2540 2634 4.832266 ACAAATCCAAAGTGATGGTAGCAA 59.168 37.500 0.00 0.00 41.46 3.91
2541 2635 4.218200 CACAAATCCAAAGTGATGGTAGCA 59.782 41.667 0.00 0.00 41.46 3.49
2542 2636 4.737054 CACAAATCCAAAGTGATGGTAGC 58.263 43.478 0.00 0.00 41.46 3.58
2543 2637 4.218200 TGCACAAATCCAAAGTGATGGTAG 59.782 41.667 0.00 0.00 41.46 3.18
2544 2638 4.148079 TGCACAAATCCAAAGTGATGGTA 58.852 39.130 0.00 0.00 41.46 3.25
2545 2639 2.964464 TGCACAAATCCAAAGTGATGGT 59.036 40.909 0.00 0.00 41.46 3.55
2546 2640 3.663995 TGCACAAATCCAAAGTGATGG 57.336 42.857 0.00 0.00 42.12 3.51
2547 2641 4.562082 ACATGCACAAATCCAAAGTGATG 58.438 39.130 0.00 0.00 35.33 3.07
2548 2642 4.877378 ACATGCACAAATCCAAAGTGAT 57.123 36.364 0.00 0.00 35.33 3.06
2549 2643 5.048782 GTCTACATGCACAAATCCAAAGTGA 60.049 40.000 0.00 0.00 35.33 3.41
2550 2644 5.156355 GTCTACATGCACAAATCCAAAGTG 58.844 41.667 0.00 0.00 36.39 3.16
2551 2645 4.083324 CGTCTACATGCACAAATCCAAAGT 60.083 41.667 0.00 0.00 0.00 2.66
2552 2646 4.083324 ACGTCTACATGCACAAATCCAAAG 60.083 41.667 0.00 0.00 0.00 2.77
2553 2647 3.818210 ACGTCTACATGCACAAATCCAAA 59.182 39.130 0.00 0.00 0.00 3.28
2554 2648 3.407698 ACGTCTACATGCACAAATCCAA 58.592 40.909 0.00 0.00 0.00 3.53
2555 2649 3.000041 GACGTCTACATGCACAAATCCA 59.000 45.455 8.70 0.00 0.00 3.41
2556 2650 2.029244 CGACGTCTACATGCACAAATCC 59.971 50.000 14.70 0.00 0.00 3.01
2557 2651 2.534939 GCGACGTCTACATGCACAAATC 60.535 50.000 14.70 0.00 0.00 2.17
2558 2652 1.393539 GCGACGTCTACATGCACAAAT 59.606 47.619 14.70 0.00 0.00 2.32
2559 2653 0.787787 GCGACGTCTACATGCACAAA 59.212 50.000 14.70 0.00 0.00 2.83
2560 2654 0.038618 AGCGACGTCTACATGCACAA 60.039 50.000 14.70 0.00 0.00 3.33
2561 2655 0.456142 GAGCGACGTCTACATGCACA 60.456 55.000 14.70 0.00 0.00 4.57
2562 2656 1.140407 GGAGCGACGTCTACATGCAC 61.140 60.000 14.70 7.57 0.00 4.57
2563 2657 1.138883 GGAGCGACGTCTACATGCA 59.861 57.895 14.70 0.00 0.00 3.96
2564 2658 0.249073 ATGGAGCGACGTCTACATGC 60.249 55.000 14.70 9.14 36.32 4.06
2565 2659 1.481240 CATGGAGCGACGTCTACATG 58.519 55.000 21.75 21.75 45.73 3.21
2566 2660 0.385751 CCATGGAGCGACGTCTACAT 59.614 55.000 14.70 5.29 38.13 2.29
2567 2661 0.963856 ACCATGGAGCGACGTCTACA 60.964 55.000 21.47 2.70 0.00 2.74
2568 2662 1.002684 CTACCATGGAGCGACGTCTAC 60.003 57.143 21.47 5.63 0.00 2.59
2569 2663 1.306148 CTACCATGGAGCGACGTCTA 58.694 55.000 21.47 0.00 0.00 2.59
2570 2664 1.384989 CCTACCATGGAGCGACGTCT 61.385 60.000 21.47 0.00 0.00 4.18
2571 2665 1.065928 CCTACCATGGAGCGACGTC 59.934 63.158 21.47 5.18 0.00 4.34
2572 2666 3.077519 GCCTACCATGGAGCGACGT 62.078 63.158 21.47 0.00 0.00 4.34
2573 2667 2.279517 GCCTACCATGGAGCGACG 60.280 66.667 21.47 0.11 0.00 5.12
2578 2672 1.097547 CCTTTGCGCCTACCATGGAG 61.098 60.000 21.47 11.37 0.00 3.86
2579 2673 1.077787 CCTTTGCGCCTACCATGGA 60.078 57.895 21.47 0.67 0.00 3.41
2580 2674 2.774799 GCCTTTGCGCCTACCATGG 61.775 63.158 11.19 11.19 0.00 3.66
2581 2675 1.594194 TTGCCTTTGCGCCTACCATG 61.594 55.000 4.18 0.00 41.78 3.66
2582 2676 1.304052 TTGCCTTTGCGCCTACCAT 60.304 52.632 4.18 0.00 41.78 3.55
2583 2677 2.114199 TTGCCTTTGCGCCTACCA 59.886 55.556 4.18 0.00 41.78 3.25
2584 2678 2.566529 GTTGCCTTTGCGCCTACC 59.433 61.111 4.18 0.00 41.78 3.18
2585 2679 2.566529 GGTTGCCTTTGCGCCTAC 59.433 61.111 4.18 0.00 41.78 3.18
2586 2680 2.675075 GGGTTGCCTTTGCGCCTA 60.675 61.111 4.18 0.00 41.78 3.93
2590 2684 3.373565 GAGGGGGTTGCCTTTGCG 61.374 66.667 0.00 0.00 41.78 4.85
2591 2685 2.997315 GGAGGGGGTTGCCTTTGC 60.997 66.667 0.00 0.00 38.26 3.68
2592 2686 1.908299 GTGGAGGGGGTTGCCTTTG 60.908 63.158 0.00 0.00 0.00 2.77
2593 2687 2.526110 GTGGAGGGGGTTGCCTTT 59.474 61.111 0.00 0.00 0.00 3.11
2594 2688 3.590574 GGTGGAGGGGGTTGCCTT 61.591 66.667 0.00 0.00 0.00 4.35
2597 2691 2.746947 AAATGGGTGGAGGGGGTTGC 62.747 60.000 0.00 0.00 0.00 4.17
2598 2692 0.614697 GAAATGGGTGGAGGGGGTTG 60.615 60.000 0.00 0.00 0.00 3.77
2599 2693 1.781001 GAAATGGGTGGAGGGGGTT 59.219 57.895 0.00 0.00 0.00 4.11
2600 2694 2.612493 CGAAATGGGTGGAGGGGGT 61.612 63.158 0.00 0.00 0.00 4.95
2601 2695 2.275418 CGAAATGGGTGGAGGGGG 59.725 66.667 0.00 0.00 0.00 5.40
2602 2696 1.645402 ATCCGAAATGGGTGGAGGGG 61.645 60.000 0.00 0.00 38.76 4.79
2603 2697 0.258774 AATCCGAAATGGGTGGAGGG 59.741 55.000 0.00 0.00 38.76 4.30
2604 2698 1.340991 ACAATCCGAAATGGGTGGAGG 60.341 52.381 0.00 0.00 38.76 4.30
2605 2699 2.128771 ACAATCCGAAATGGGTGGAG 57.871 50.000 0.00 0.00 38.76 3.86
2606 2700 3.722908 TTACAATCCGAAATGGGTGGA 57.277 42.857 0.00 0.00 38.76 4.02
2607 2701 3.951037 TGATTACAATCCGAAATGGGTGG 59.049 43.478 0.00 0.00 38.76 4.61
2608 2702 5.356751 TCTTGATTACAATCCGAAATGGGTG 59.643 40.000 0.00 0.00 35.37 4.61
2609 2703 5.505780 TCTTGATTACAATCCGAAATGGGT 58.494 37.500 0.00 0.00 35.37 4.51
2610 2704 5.009010 CCTCTTGATTACAATCCGAAATGGG 59.991 44.000 0.00 0.00 35.37 4.00
2611 2705 5.822519 TCCTCTTGATTACAATCCGAAATGG 59.177 40.000 0.00 0.00 35.37 3.16
2612 2706 6.925610 TCCTCTTGATTACAATCCGAAATG 57.074 37.500 0.00 0.00 35.37 2.32
2613 2707 7.338710 TCTTCCTCTTGATTACAATCCGAAAT 58.661 34.615 0.00 0.00 35.37 2.17
2614 2708 6.707290 TCTTCCTCTTGATTACAATCCGAAA 58.293 36.000 0.00 0.00 35.37 3.46
2615 2709 6.294361 TCTTCCTCTTGATTACAATCCGAA 57.706 37.500 0.00 0.00 35.37 4.30
2616 2710 5.932619 TCTTCCTCTTGATTACAATCCGA 57.067 39.130 0.00 0.00 35.37 4.55
2617 2711 7.928706 AGTTATCTTCCTCTTGATTACAATCCG 59.071 37.037 0.00 0.00 35.37 4.18
2618 2712 9.050601 CAGTTATCTTCCTCTTGATTACAATCC 57.949 37.037 0.00 0.00 35.37 3.01
2619 2713 9.606631 ACAGTTATCTTCCTCTTGATTACAATC 57.393 33.333 0.00 0.00 35.37 2.67
2620 2714 9.965902 AACAGTTATCTTCCTCTTGATTACAAT 57.034 29.630 0.00 0.00 35.37 2.71
2621 2715 9.436957 GAACAGTTATCTTCCTCTTGATTACAA 57.563 33.333 0.00 0.00 34.65 2.41
2622 2716 8.816894 AGAACAGTTATCTTCCTCTTGATTACA 58.183 33.333 0.00 0.00 0.00 2.41
2623 2717 9.092876 CAGAACAGTTATCTTCCTCTTGATTAC 57.907 37.037 0.00 0.00 0.00 1.89
2624 2718 9.035890 TCAGAACAGTTATCTTCCTCTTGATTA 57.964 33.333 0.00 0.00 0.00 1.75
2625 2719 7.911651 TCAGAACAGTTATCTTCCTCTTGATT 58.088 34.615 0.00 0.00 0.00 2.57
2626 2720 7.364585 CCTCAGAACAGTTATCTTCCTCTTGAT 60.365 40.741 0.00 0.00 0.00 2.57
2627 2721 6.071108 CCTCAGAACAGTTATCTTCCTCTTGA 60.071 42.308 0.00 0.00 0.00 3.02
2628 2722 6.105333 CCTCAGAACAGTTATCTTCCTCTTG 58.895 44.000 0.00 0.00 0.00 3.02
2629 2723 5.188751 CCCTCAGAACAGTTATCTTCCTCTT 59.811 44.000 0.00 0.00 0.00 2.85
2630 2724 4.714308 CCCTCAGAACAGTTATCTTCCTCT 59.286 45.833 0.00 0.00 0.00 3.69
2631 2725 4.141824 CCCCTCAGAACAGTTATCTTCCTC 60.142 50.000 0.00 0.00 0.00 3.71
2632 2726 3.777522 CCCCTCAGAACAGTTATCTTCCT 59.222 47.826 0.00 0.00 0.00 3.36
2633 2727 3.118223 CCCCCTCAGAACAGTTATCTTCC 60.118 52.174 0.00 0.00 0.00 3.46
2634 2728 3.775316 TCCCCCTCAGAACAGTTATCTTC 59.225 47.826 0.00 0.00 0.00 2.87
2635 2729 3.803340 TCCCCCTCAGAACAGTTATCTT 58.197 45.455 0.00 0.00 0.00 2.40
2636 2730 3.491766 TCCCCCTCAGAACAGTTATCT 57.508 47.619 0.00 0.00 0.00 1.98
2637 2731 4.164221 TGAATCCCCCTCAGAACAGTTATC 59.836 45.833 0.00 0.00 0.00 1.75
2638 2732 4.111577 TGAATCCCCCTCAGAACAGTTAT 58.888 43.478 0.00 0.00 0.00 1.89
2639 2733 3.519510 CTGAATCCCCCTCAGAACAGTTA 59.480 47.826 0.00 0.00 42.51 2.24
2640 2734 2.307098 CTGAATCCCCCTCAGAACAGTT 59.693 50.000 0.00 0.00 42.51 3.16
2641 2735 1.912043 CTGAATCCCCCTCAGAACAGT 59.088 52.381 0.00 0.00 42.51 3.55
2642 2736 2.191400 TCTGAATCCCCCTCAGAACAG 58.809 52.381 0.12 0.00 44.89 3.16
2643 2737 2.342406 TCTGAATCCCCCTCAGAACA 57.658 50.000 0.12 0.00 44.89 3.18
2646 2740 1.366082 TCCTTCTGAATCCCCCTCAGA 59.634 52.381 0.00 0.00 45.90 3.27
2647 2741 1.767681 CTCCTTCTGAATCCCCCTCAG 59.232 57.143 0.00 0.00 41.47 3.35
2648 2742 1.366082 TCTCCTTCTGAATCCCCCTCA 59.634 52.381 0.00 0.00 0.00 3.86
2649 2743 2.182516 TCTCCTTCTGAATCCCCCTC 57.817 55.000 0.00 0.00 0.00 4.30
2650 2744 2.046447 TCTTCTCCTTCTGAATCCCCCT 59.954 50.000 0.00 0.00 0.00 4.79
2651 2745 2.171659 GTCTTCTCCTTCTGAATCCCCC 59.828 54.545 0.00 0.00 0.00 5.40
2652 2746 2.171659 GGTCTTCTCCTTCTGAATCCCC 59.828 54.545 0.00 0.00 0.00 4.81
2653 2747 2.840651 TGGTCTTCTCCTTCTGAATCCC 59.159 50.000 0.00 0.00 0.00 3.85
2654 2748 3.517500 AGTGGTCTTCTCCTTCTGAATCC 59.482 47.826 0.00 0.00 0.00 3.01
2655 2749 4.382577 GGAGTGGTCTTCTCCTTCTGAATC 60.383 50.000 4.91 0.00 45.56 2.52
2656 2750 3.517500 GGAGTGGTCTTCTCCTTCTGAAT 59.482 47.826 4.91 0.00 45.56 2.57
2657 2751 2.900546 GGAGTGGTCTTCTCCTTCTGAA 59.099 50.000 4.91 0.00 45.56 3.02
2658 2752 2.530701 GGAGTGGTCTTCTCCTTCTGA 58.469 52.381 4.91 0.00 45.56 3.27
2665 2759 3.700539 GGGTAACTAGGAGTGGTCTTCTC 59.299 52.174 0.00 0.00 31.07 2.87
2666 2760 3.566111 GGGGTAACTAGGAGTGGTCTTCT 60.566 52.174 0.00 0.00 33.49 2.85
2667 2761 2.765135 GGGGTAACTAGGAGTGGTCTTC 59.235 54.545 0.00 0.00 0.00 2.87
2668 2762 2.561526 GGGGGTAACTAGGAGTGGTCTT 60.562 54.545 0.00 0.00 0.00 3.01
2669 2763 1.008084 GGGGGTAACTAGGAGTGGTCT 59.992 57.143 0.00 0.00 0.00 3.85
2670 2764 1.008084 AGGGGGTAACTAGGAGTGGTC 59.992 57.143 0.00 0.00 0.00 4.02
2671 2765 1.099456 AGGGGGTAACTAGGAGTGGT 58.901 55.000 0.00 0.00 0.00 4.16
2672 2766 2.265526 AAGGGGGTAACTAGGAGTGG 57.734 55.000 0.00 0.00 0.00 4.00
2673 2767 3.306613 CCTAAGGGGGTAACTAGGAGTG 58.693 54.545 0.00 0.00 0.00 3.51
2674 2768 2.938648 ACCTAAGGGGGTAACTAGGAGT 59.061 50.000 0.00 0.00 37.90 3.85
2675 2769 3.207093 AGACCTAAGGGGGTAACTAGGAG 59.793 52.174 0.00 0.00 40.06 3.69
2676 2770 3.213324 AGACCTAAGGGGGTAACTAGGA 58.787 50.000 0.00 0.00 40.06 2.94
2677 2771 3.702703 AGACCTAAGGGGGTAACTAGG 57.297 52.381 0.00 0.00 40.06 3.02
2678 2772 4.383880 GCAAAGACCTAAGGGGGTAACTAG 60.384 50.000 0.00 0.00 40.06 2.57
2679 2773 3.520721 GCAAAGACCTAAGGGGGTAACTA 59.479 47.826 0.00 0.00 40.06 2.24
2680 2774 2.307980 GCAAAGACCTAAGGGGGTAACT 59.692 50.000 0.00 0.00 40.06 2.24
2681 2775 2.307980 AGCAAAGACCTAAGGGGGTAAC 59.692 50.000 0.00 0.00 40.06 2.50
2682 2776 2.574824 GAGCAAAGACCTAAGGGGGTAA 59.425 50.000 0.00 0.00 40.06 2.85
2683 2777 2.193993 GAGCAAAGACCTAAGGGGGTA 58.806 52.381 0.00 0.00 40.06 3.69
2684 2778 0.992695 GAGCAAAGACCTAAGGGGGT 59.007 55.000 0.00 0.00 43.07 4.95
2685 2779 1.290134 AGAGCAAAGACCTAAGGGGG 58.710 55.000 0.00 0.00 40.03 5.40
2686 2780 3.519913 AGTTAGAGCAAAGACCTAAGGGG 59.480 47.826 0.00 0.00 41.89 4.79
2687 2781 4.828072 AGTTAGAGCAAAGACCTAAGGG 57.172 45.455 0.00 0.00 38.88 3.95
2688 2782 4.938226 CCAAGTTAGAGCAAAGACCTAAGG 59.062 45.833 0.00 0.00 0.00 2.69
2689 2783 4.393371 GCCAAGTTAGAGCAAAGACCTAAG 59.607 45.833 0.00 0.00 0.00 2.18
2690 2784 4.202419 TGCCAAGTTAGAGCAAAGACCTAA 60.202 41.667 0.00 0.00 32.56 2.69
2691 2785 3.326588 TGCCAAGTTAGAGCAAAGACCTA 59.673 43.478 0.00 0.00 32.56 3.08
2692 2786 2.106511 TGCCAAGTTAGAGCAAAGACCT 59.893 45.455 0.00 0.00 32.56 3.85
2693 2787 2.485814 CTGCCAAGTTAGAGCAAAGACC 59.514 50.000 0.00 0.00 35.79 3.85
2694 2788 2.485814 CCTGCCAAGTTAGAGCAAAGAC 59.514 50.000 0.00 0.00 35.79 3.01
2695 2789 2.783135 CCTGCCAAGTTAGAGCAAAGA 58.217 47.619 0.00 0.00 35.79 2.52
2696 2790 1.200948 GCCTGCCAAGTTAGAGCAAAG 59.799 52.381 0.00 0.00 35.79 2.77
2697 2791 1.202927 AGCCTGCCAAGTTAGAGCAAA 60.203 47.619 0.00 0.00 35.79 3.68
2698 2792 0.401738 AGCCTGCCAAGTTAGAGCAA 59.598 50.000 0.00 0.00 35.79 3.91
2699 2793 1.275666 TAGCCTGCCAAGTTAGAGCA 58.724 50.000 0.00 0.00 34.79 4.26
2700 2794 2.403252 TTAGCCTGCCAAGTTAGAGC 57.597 50.000 0.00 0.00 0.00 4.09
2701 2795 3.878778 ACATTAGCCTGCCAAGTTAGAG 58.121 45.455 0.00 0.00 0.00 2.43
2702 2796 4.009675 CAACATTAGCCTGCCAAGTTAGA 58.990 43.478 0.00 0.00 0.00 2.10
2703 2797 3.129287 CCAACATTAGCCTGCCAAGTTAG 59.871 47.826 0.00 0.00 0.00 2.34
2704 2798 3.088532 CCAACATTAGCCTGCCAAGTTA 58.911 45.455 0.00 0.00 0.00 2.24
2705 2799 1.895131 CCAACATTAGCCTGCCAAGTT 59.105 47.619 0.00 0.00 0.00 2.66
2706 2800 1.203050 ACCAACATTAGCCTGCCAAGT 60.203 47.619 0.00 0.00 0.00 3.16
2707 2801 1.549203 ACCAACATTAGCCTGCCAAG 58.451 50.000 0.00 0.00 0.00 3.61
2708 2802 2.889170 TACCAACATTAGCCTGCCAA 57.111 45.000 0.00 0.00 0.00 4.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.