Multiple sequence alignment - TraesCS4A01G140100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G140100 chr4A 100.000 3510 0 0 1 3510 214310858 214314367 0.000000e+00 6482
1 TraesCS4A01G140100 chr4D 95.978 3033 81 15 506 3510 294702743 294699724 0.000000e+00 4887
2 TraesCS4A01G140100 chr4D 90.397 302 17 4 224 514 294724429 294724129 1.530000e-103 387
3 TraesCS4A01G140100 chr4D 93.939 231 10 4 1 230 213849446 213849219 2.590000e-91 346
4 TraesCS4A01G140100 chr4B 97.586 2734 55 10 785 3510 365622200 365624930 0.000000e+00 4673
5 TraesCS4A01G140100 chr4B 87.330 442 34 4 345 766 365617751 365618190 1.460000e-133 486
6 TraesCS4A01G140100 chr3D 95.089 224 9 2 1 223 609351814 609352036 5.570000e-93 351
7 TraesCS4A01G140100 chr3D 93.333 225 13 2 1 224 519241010 519241233 7.260000e-87 331
8 TraesCS4A01G140100 chr1D 95.089 224 9 2 1 223 416447993 416448215 5.570000e-93 351
9 TraesCS4A01G140100 chr7D 93.939 231 12 2 1 230 117584528 117584299 7.210000e-92 348
10 TraesCS4A01G140100 chr7D 94.222 225 11 2 1 224 551551338 551551561 3.350000e-90 342
11 TraesCS4A01G140100 chr7D 93.722 223 12 2 3 224 551667621 551667842 2.020000e-87 333
12 TraesCS4A01G140100 chrUn 94.643 224 10 2 2 224 21620926 21621148 2.590000e-91 346
13 TraesCS4A01G140100 chr6D 93.750 224 12 2 1 223 84556213 84555991 5.610000e-88 335


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G140100 chr4A 214310858 214314367 3509 False 6482 6482 100.000 1 3510 1 chr4A.!!$F1 3509
1 TraesCS4A01G140100 chr4D 294699724 294702743 3019 True 4887 4887 95.978 506 3510 1 chr4D.!!$R2 3004
2 TraesCS4A01G140100 chr4B 365622200 365624930 2730 False 4673 4673 97.586 785 3510 1 chr4B.!!$F2 2725

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
65 66 0.034896 ACCACTCTGTTTAGCACCGG 59.965 55.0 0.0 0.0 0.00 5.28 F
426 427 0.035458 ACTACTCTGGGCTGTTGCAC 59.965 55.0 0.0 0.0 44.33 4.57 F
475 476 0.100682 CCGACCATCTCCTACACACG 59.899 60.0 0.0 0.0 0.00 4.49 F
487 488 0.108774 TACACACGCCACATCCCAAA 59.891 50.0 0.0 0.0 0.00 3.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1691 1707 0.394216 CACGCCAAATCCCTGATCCA 60.394 55.000 0.0 0.0 0.00 3.41 R
1944 1960 1.877637 TCTCACCAAACATGTCACCG 58.122 50.000 0.0 0.0 0.00 4.94 R
2341 2357 4.937620 GTCACATTGTCCTTATCTTGCTCA 59.062 41.667 0.0 0.0 0.00 4.26 R
2542 2558 6.600822 AGTTTCCATGTCAAGGATGATTACAG 59.399 38.462 0.0 0.0 38.01 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.968675 CGGTACTAAAGGTGTTGGAGG 58.031 52.381 0.00 0.00 0.00 4.30
21 22 2.354403 CGGTACTAAAGGTGTTGGAGGG 60.354 54.545 0.00 0.00 0.00 4.30
22 23 2.026542 GGTACTAAAGGTGTTGGAGGGG 60.027 54.545 0.00 0.00 0.00 4.79
23 24 0.404426 ACTAAAGGTGTTGGAGGGGC 59.596 55.000 0.00 0.00 0.00 5.80
24 25 0.323451 CTAAAGGTGTTGGAGGGGCC 60.323 60.000 0.00 0.00 37.10 5.80
25 26 1.795951 TAAAGGTGTTGGAGGGGCCC 61.796 60.000 17.12 17.12 34.97 5.80
28 29 4.366684 GTGTTGGAGGGGCCCCAG 62.367 72.222 42.48 0.00 38.92 4.45
29 30 4.608514 TGTTGGAGGGGCCCCAGA 62.609 66.667 42.48 22.84 38.92 3.86
30 31 4.048470 GTTGGAGGGGCCCCAGAC 62.048 72.222 42.48 29.94 38.92 3.51
31 32 4.285790 TTGGAGGGGCCCCAGACT 62.286 66.667 42.48 23.24 38.92 3.24
33 34 4.741239 GGAGGGGCCCCAGACTGA 62.741 72.222 42.48 0.00 38.92 3.41
34 35 3.403558 GAGGGGCCCCAGACTGAC 61.404 72.222 42.48 19.17 38.92 3.51
35 36 4.270153 AGGGGCCCCAGACTGACA 62.270 66.667 42.48 0.00 38.92 3.58
36 37 3.256960 GGGGCCCCAGACTGACAA 61.257 66.667 37.61 0.00 35.81 3.18
37 38 2.034221 GGGCCCCAGACTGACAAC 59.966 66.667 12.23 0.00 0.00 3.32
38 39 2.829384 GGGCCCCAGACTGACAACA 61.829 63.158 12.23 0.00 0.00 3.33
39 40 1.380302 GGCCCCAGACTGACAACAT 59.620 57.895 3.32 0.00 0.00 2.71
40 41 0.678048 GGCCCCAGACTGACAACATC 60.678 60.000 3.32 0.00 0.00 3.06
41 42 0.678048 GCCCCAGACTGACAACATCC 60.678 60.000 3.32 0.00 0.00 3.51
42 43 0.987294 CCCCAGACTGACAACATCCT 59.013 55.000 3.32 0.00 0.00 3.24
43 44 1.339438 CCCCAGACTGACAACATCCTG 60.339 57.143 3.32 0.00 0.00 3.86
44 45 1.446907 CCAGACTGACAACATCCTGC 58.553 55.000 3.32 0.00 0.00 4.85
45 46 1.446907 CAGACTGACAACATCCTGCC 58.553 55.000 0.00 0.00 0.00 4.85
46 47 1.059098 AGACTGACAACATCCTGCCA 58.941 50.000 0.00 0.00 0.00 4.92
47 48 1.160137 GACTGACAACATCCTGCCAC 58.840 55.000 0.00 0.00 0.00 5.01
48 49 0.250901 ACTGACAACATCCTGCCACC 60.251 55.000 0.00 0.00 0.00 4.61
49 50 0.250858 CTGACAACATCCTGCCACCA 60.251 55.000 0.00 0.00 0.00 4.17
50 51 0.537143 TGACAACATCCTGCCACCAC 60.537 55.000 0.00 0.00 0.00 4.16
51 52 0.250901 GACAACATCCTGCCACCACT 60.251 55.000 0.00 0.00 0.00 4.00
52 53 0.250901 ACAACATCCTGCCACCACTC 60.251 55.000 0.00 0.00 0.00 3.51
53 54 0.037303 CAACATCCTGCCACCACTCT 59.963 55.000 0.00 0.00 0.00 3.24
54 55 0.037303 AACATCCTGCCACCACTCTG 59.963 55.000 0.00 0.00 0.00 3.35
55 56 1.130054 ACATCCTGCCACCACTCTGT 61.130 55.000 0.00 0.00 0.00 3.41
56 57 0.037303 CATCCTGCCACCACTCTGTT 59.963 55.000 0.00 0.00 0.00 3.16
57 58 0.773644 ATCCTGCCACCACTCTGTTT 59.226 50.000 0.00 0.00 0.00 2.83
58 59 1.429930 TCCTGCCACCACTCTGTTTA 58.570 50.000 0.00 0.00 0.00 2.01
59 60 1.347707 TCCTGCCACCACTCTGTTTAG 59.652 52.381 0.00 0.00 0.00 1.85
60 61 1.160137 CTGCCACCACTCTGTTTAGC 58.840 55.000 0.00 0.00 0.00 3.09
61 62 0.472044 TGCCACCACTCTGTTTAGCA 59.528 50.000 0.00 0.00 0.00 3.49
62 63 0.875059 GCCACCACTCTGTTTAGCAC 59.125 55.000 0.00 0.00 0.00 4.40
63 64 1.523758 CCACCACTCTGTTTAGCACC 58.476 55.000 0.00 0.00 0.00 5.01
64 65 1.148310 CACCACTCTGTTTAGCACCG 58.852 55.000 0.00 0.00 0.00 4.94
65 66 0.034896 ACCACTCTGTTTAGCACCGG 59.965 55.000 0.00 0.00 0.00 5.28
66 67 0.034896 CCACTCTGTTTAGCACCGGT 59.965 55.000 0.00 0.00 0.00 5.28
67 68 1.542547 CCACTCTGTTTAGCACCGGTT 60.543 52.381 2.97 0.00 0.00 4.44
68 69 1.798813 CACTCTGTTTAGCACCGGTTC 59.201 52.381 2.97 0.00 0.00 3.62
69 70 1.068474 CTCTGTTTAGCACCGGTTCG 58.932 55.000 2.97 0.00 0.00 3.95
70 71 0.390124 TCTGTTTAGCACCGGTTCGT 59.610 50.000 2.97 0.00 0.00 3.85
71 72 0.511221 CTGTTTAGCACCGGTTCGTG 59.489 55.000 2.97 0.00 36.80 4.35
72 73 0.179078 TGTTTAGCACCGGTTCGTGT 60.179 50.000 2.97 0.00 36.08 4.49
73 74 0.509929 GTTTAGCACCGGTTCGTGTC 59.490 55.000 2.97 0.00 36.08 3.67
74 75 0.104487 TTTAGCACCGGTTCGTGTCA 59.896 50.000 2.97 0.00 36.08 3.58
75 76 0.598158 TTAGCACCGGTTCGTGTCAC 60.598 55.000 2.97 0.00 36.08 3.67
76 77 2.736343 TAGCACCGGTTCGTGTCACG 62.736 60.000 19.38 19.38 44.19 4.35
85 86 3.698463 CGTGTCACGAACCGGTGC 61.698 66.667 20.75 4.53 46.05 5.01
86 87 2.279918 GTGTCACGAACCGGTGCT 60.280 61.111 8.52 0.00 37.83 4.40
87 88 1.007038 GTGTCACGAACCGGTGCTA 60.007 57.895 8.52 0.00 37.83 3.49
88 89 0.598158 GTGTCACGAACCGGTGCTAA 60.598 55.000 8.52 0.00 37.83 3.09
89 90 0.104487 TGTCACGAACCGGTGCTAAA 59.896 50.000 8.52 0.00 37.83 1.85
90 91 0.788391 GTCACGAACCGGTGCTAAAG 59.212 55.000 8.52 0.00 37.83 1.85
91 92 0.320073 TCACGAACCGGTGCTAAAGG 60.320 55.000 8.52 0.00 37.83 3.11
92 93 0.601841 CACGAACCGGTGCTAAAGGT 60.602 55.000 8.52 0.00 40.50 3.50
95 96 2.922779 AACCGGTGCTAAAGGTTCG 58.077 52.632 8.52 0.00 44.13 3.95
96 97 1.232621 AACCGGTGCTAAAGGTTCGC 61.233 55.000 8.52 0.00 44.13 4.70
97 98 2.396157 CCGGTGCTAAAGGTTCGCC 61.396 63.158 0.00 0.00 37.60 5.54
98 99 1.669760 CGGTGCTAAAGGTTCGCCA 60.670 57.895 0.00 0.00 40.60 5.69
99 100 1.873863 GGTGCTAAAGGTTCGCCAC 59.126 57.895 0.00 0.00 40.60 5.01
100 101 1.495951 GTGCTAAAGGTTCGCCACG 59.504 57.895 0.00 0.00 40.60 4.94
101 102 0.947180 GTGCTAAAGGTTCGCCACGA 60.947 55.000 0.00 0.00 40.60 4.35
102 103 0.249953 TGCTAAAGGTTCGCCACGAA 60.250 50.000 0.00 0.00 43.75 3.85
109 110 2.049248 TTCGCCACGAACCGGTAC 60.049 61.111 8.00 0.00 41.05 3.34
110 111 2.563798 TTCGCCACGAACCGGTACT 61.564 57.895 8.00 0.00 41.05 2.73
111 112 1.240641 TTCGCCACGAACCGGTACTA 61.241 55.000 8.00 0.00 41.05 1.82
112 113 1.212490 CGCCACGAACCGGTACTAA 59.788 57.895 8.00 0.00 0.00 2.24
113 114 0.179129 CGCCACGAACCGGTACTAAT 60.179 55.000 8.00 0.00 0.00 1.73
114 115 1.283736 GCCACGAACCGGTACTAATG 58.716 55.000 8.00 2.10 0.00 1.90
115 116 1.135024 GCCACGAACCGGTACTAATGA 60.135 52.381 8.00 0.00 0.00 2.57
116 117 2.805845 CCACGAACCGGTACTAATGAG 58.194 52.381 8.00 0.00 0.00 2.90
117 118 2.424601 CCACGAACCGGTACTAATGAGA 59.575 50.000 8.00 0.00 0.00 3.27
118 119 3.488721 CCACGAACCGGTACTAATGAGAG 60.489 52.174 8.00 0.00 0.00 3.20
119 120 3.128242 CACGAACCGGTACTAATGAGAGT 59.872 47.826 8.00 0.00 0.00 3.24
120 121 3.128242 ACGAACCGGTACTAATGAGAGTG 59.872 47.826 8.00 0.00 0.00 3.51
121 122 3.488721 CGAACCGGTACTAATGAGAGTGG 60.489 52.174 8.00 0.00 0.00 4.00
122 123 1.755380 ACCGGTACTAATGAGAGTGGC 59.245 52.381 4.49 0.00 0.00 5.01
123 124 1.068741 CCGGTACTAATGAGAGTGGCC 59.931 57.143 0.00 0.00 0.00 5.36
124 125 1.068741 CGGTACTAATGAGAGTGGCCC 59.931 57.143 0.00 0.00 0.00 5.80
125 126 1.068741 GGTACTAATGAGAGTGGCCCG 59.931 57.143 0.00 0.00 0.00 6.13
126 127 0.750850 TACTAATGAGAGTGGCCCGC 59.249 55.000 0.00 0.00 0.00 6.13
127 128 1.227674 CTAATGAGAGTGGCCCGCC 60.228 63.158 0.00 0.00 0.00 6.13
128 129 1.689233 TAATGAGAGTGGCCCGCCT 60.689 57.895 7.35 0.00 36.94 5.52
129 130 0.397957 TAATGAGAGTGGCCCGCCTA 60.398 55.000 7.35 0.00 36.94 3.93
130 131 1.690219 AATGAGAGTGGCCCGCCTAG 61.690 60.000 7.35 0.00 36.94 3.02
131 132 4.228567 GAGAGTGGCCCGCCTAGC 62.229 72.222 7.35 0.00 36.94 3.42
139 140 4.090588 CCCGCCTAGCCGTTGGAA 62.091 66.667 0.00 0.00 0.00 3.53
140 141 2.189521 CCGCCTAGCCGTTGGAAT 59.810 61.111 0.00 0.00 0.00 3.01
141 142 1.887707 CCGCCTAGCCGTTGGAATC 60.888 63.158 0.00 0.00 0.00 2.52
142 143 2.237751 CGCCTAGCCGTTGGAATCG 61.238 63.158 0.00 0.00 0.00 3.34
148 149 4.924019 CCGTTGGAATCGGCACTA 57.076 55.556 0.00 0.00 41.48 2.74
149 150 3.146783 CCGTTGGAATCGGCACTAA 57.853 52.632 0.00 0.00 41.48 2.24
150 151 1.663695 CCGTTGGAATCGGCACTAAT 58.336 50.000 0.00 0.00 41.48 1.73
151 152 1.330521 CCGTTGGAATCGGCACTAATG 59.669 52.381 0.00 0.00 41.48 1.90
152 153 2.276201 CGTTGGAATCGGCACTAATGA 58.724 47.619 0.00 0.00 0.00 2.57
153 154 2.872245 CGTTGGAATCGGCACTAATGAT 59.128 45.455 0.00 0.00 0.00 2.45
154 155 3.059597 CGTTGGAATCGGCACTAATGATC 60.060 47.826 0.00 0.00 0.00 2.92
155 156 3.836365 TGGAATCGGCACTAATGATCA 57.164 42.857 0.00 0.00 0.00 2.92
156 157 3.466836 TGGAATCGGCACTAATGATCAC 58.533 45.455 0.00 0.00 0.00 3.06
157 158 3.118445 TGGAATCGGCACTAATGATCACA 60.118 43.478 0.00 0.00 0.00 3.58
158 159 4.067896 GGAATCGGCACTAATGATCACAT 58.932 43.478 0.00 0.00 38.50 3.21
159 160 5.221621 TGGAATCGGCACTAATGATCACATA 60.222 40.000 0.00 0.00 35.50 2.29
160 161 5.349817 GGAATCGGCACTAATGATCACATAG 59.650 44.000 13.32 13.32 35.50 2.23
161 162 4.937201 TCGGCACTAATGATCACATAGT 57.063 40.909 14.36 14.36 35.50 2.12
162 163 4.620982 TCGGCACTAATGATCACATAGTG 58.379 43.478 29.33 29.33 38.94 2.74
163 164 3.185188 CGGCACTAATGATCACATAGTGC 59.815 47.826 37.94 37.94 47.00 4.40
164 165 4.739046 GCACTAATGATCACATAGTGCC 57.261 45.455 36.99 27.50 45.16 5.01
165 166 3.185188 GCACTAATGATCACATAGTGCCG 59.815 47.826 36.99 21.87 45.16 5.69
166 167 3.742882 CACTAATGATCACATAGTGCCGG 59.257 47.826 25.70 0.00 34.69 6.13
167 168 1.597742 AATGATCACATAGTGCCGGC 58.402 50.000 22.73 22.73 35.50 6.13
168 169 0.761187 ATGATCACATAGTGCCGGCT 59.239 50.000 29.70 11.31 34.71 5.52
169 170 0.104855 TGATCACATAGTGCCGGCTC 59.895 55.000 29.70 25.08 32.98 4.70
170 171 0.104855 GATCACATAGTGCCGGCTCA 59.895 55.000 29.70 14.99 32.98 4.26
171 172 0.541392 ATCACATAGTGCCGGCTCAA 59.459 50.000 29.70 13.02 32.98 3.02
172 173 0.323302 TCACATAGTGCCGGCTCAAA 59.677 50.000 29.70 16.66 32.98 2.69
173 174 1.065491 TCACATAGTGCCGGCTCAAAT 60.065 47.619 29.70 18.20 32.98 2.32
174 175 2.169561 TCACATAGTGCCGGCTCAAATA 59.830 45.455 29.70 11.75 32.98 1.40
175 176 2.287915 CACATAGTGCCGGCTCAAATAC 59.712 50.000 29.70 16.45 0.00 1.89
176 177 2.093181 ACATAGTGCCGGCTCAAATACA 60.093 45.455 29.70 0.07 0.00 2.29
177 178 2.772077 TAGTGCCGGCTCAAATACAA 57.228 45.000 29.70 0.00 0.00 2.41
178 179 1.904287 AGTGCCGGCTCAAATACAAA 58.096 45.000 29.70 0.00 0.00 2.83
179 180 1.539827 AGTGCCGGCTCAAATACAAAC 59.460 47.619 29.70 13.21 0.00 2.93
180 181 0.885196 TGCCGGCTCAAATACAAACC 59.115 50.000 29.70 0.00 0.00 3.27
181 182 0.179174 GCCGGCTCAAATACAAACCG 60.179 55.000 22.15 0.00 40.30 4.44
182 183 1.444836 CCGGCTCAAATACAAACCGA 58.555 50.000 0.00 0.00 43.19 4.69
183 184 1.396996 CCGGCTCAAATACAAACCGAG 59.603 52.381 0.00 0.00 43.19 4.63
184 185 2.343101 CGGCTCAAATACAAACCGAGA 58.657 47.619 0.00 0.00 43.19 4.04
185 186 2.093783 CGGCTCAAATACAAACCGAGAC 59.906 50.000 0.00 0.00 43.19 3.36
186 187 3.335579 GGCTCAAATACAAACCGAGACT 58.664 45.455 0.00 0.00 0.00 3.24
187 188 4.501071 GGCTCAAATACAAACCGAGACTA 58.499 43.478 0.00 0.00 0.00 2.59
188 189 4.933400 GGCTCAAATACAAACCGAGACTAA 59.067 41.667 0.00 0.00 0.00 2.24
189 190 5.585047 GGCTCAAATACAAACCGAGACTAAT 59.415 40.000 0.00 0.00 0.00 1.73
190 191 6.456988 GGCTCAAATACAAACCGAGACTAATG 60.457 42.308 0.00 0.00 0.00 1.90
191 192 6.312918 GCTCAAATACAAACCGAGACTAATGA 59.687 38.462 0.00 0.00 0.00 2.57
192 193 7.464710 GCTCAAATACAAACCGAGACTAATGAG 60.465 40.741 0.00 0.00 33.14 2.90
193 194 6.312918 TCAAATACAAACCGAGACTAATGAGC 59.687 38.462 0.00 0.00 0.00 4.26
194 195 3.963428 ACAAACCGAGACTAATGAGCT 57.037 42.857 0.00 0.00 0.00 4.09
195 196 3.589988 ACAAACCGAGACTAATGAGCTG 58.410 45.455 0.00 0.00 0.00 4.24
196 197 3.258372 ACAAACCGAGACTAATGAGCTGA 59.742 43.478 0.00 0.00 0.00 4.26
197 198 4.245660 CAAACCGAGACTAATGAGCTGAA 58.754 43.478 0.00 0.00 0.00 3.02
198 199 3.512033 ACCGAGACTAATGAGCTGAAC 57.488 47.619 0.00 0.00 0.00 3.18
199 200 2.826128 ACCGAGACTAATGAGCTGAACA 59.174 45.455 0.00 0.00 0.00 3.18
200 201 3.449018 ACCGAGACTAATGAGCTGAACAT 59.551 43.478 0.00 0.00 0.00 2.71
201 202 4.081420 ACCGAGACTAATGAGCTGAACATT 60.081 41.667 0.00 0.00 40.40 2.71
202 203 5.127194 ACCGAGACTAATGAGCTGAACATTA 59.873 40.000 0.00 0.00 38.61 1.90
207 208 2.355010 ATGAGCTGAACATTAGGCCC 57.645 50.000 0.00 0.00 0.00 5.80
208 209 1.289160 TGAGCTGAACATTAGGCCCT 58.711 50.000 0.00 0.00 0.00 5.19
209 210 1.635487 TGAGCTGAACATTAGGCCCTT 59.365 47.619 0.00 0.00 0.00 3.95
210 211 2.041620 TGAGCTGAACATTAGGCCCTTT 59.958 45.455 0.00 0.00 0.00 3.11
211 212 3.092301 GAGCTGAACATTAGGCCCTTTT 58.908 45.455 0.00 0.00 0.00 2.27
212 213 3.510459 AGCTGAACATTAGGCCCTTTTT 58.490 40.909 0.00 0.00 0.00 1.94
235 236 8.767478 TTTTCTACTAGTGCATTACCTAACAC 57.233 34.615 5.39 0.00 0.00 3.32
236 237 6.461110 TCTACTAGTGCATTACCTAACACC 57.539 41.667 5.39 0.00 33.46 4.16
237 238 5.953548 TCTACTAGTGCATTACCTAACACCA 59.046 40.000 5.39 0.00 33.46 4.17
238 239 5.492855 ACTAGTGCATTACCTAACACCAA 57.507 39.130 0.00 0.00 33.46 3.67
239 240 5.871834 ACTAGTGCATTACCTAACACCAAA 58.128 37.500 0.00 0.00 33.46 3.28
240 241 6.300703 ACTAGTGCATTACCTAACACCAAAA 58.699 36.000 0.00 0.00 33.46 2.44
241 242 6.773685 ACTAGTGCATTACCTAACACCAAAAA 59.226 34.615 0.00 0.00 33.46 1.94
242 243 6.084326 AGTGCATTACCTAACACCAAAAAG 57.916 37.500 0.00 0.00 33.46 2.27
243 244 5.010617 AGTGCATTACCTAACACCAAAAAGG 59.989 40.000 0.00 0.00 45.67 3.11
244 245 4.282195 TGCATTACCTAACACCAAAAAGGG 59.718 41.667 0.00 0.00 43.89 3.95
245 246 4.525100 GCATTACCTAACACCAAAAAGGGA 59.475 41.667 0.00 0.00 43.89 4.20
246 247 5.011227 GCATTACCTAACACCAAAAAGGGAA 59.989 40.000 0.00 0.00 43.89 3.97
247 248 6.463190 GCATTACCTAACACCAAAAAGGGAAA 60.463 38.462 0.00 0.00 43.89 3.13
248 249 7.676004 CATTACCTAACACCAAAAAGGGAAAT 58.324 34.615 0.00 0.00 43.89 2.17
249 250 5.545063 ACCTAACACCAAAAAGGGAAATG 57.455 39.130 0.00 0.00 43.89 2.32
250 251 4.346709 ACCTAACACCAAAAAGGGAAATGG 59.653 41.667 0.00 0.00 43.89 3.16
251 252 4.346709 CCTAACACCAAAAAGGGAAATGGT 59.653 41.667 0.00 0.00 46.80 3.55
256 257 5.645056 ACCAAAAAGGGAAATGGTGAAAT 57.355 34.783 0.00 0.00 44.25 2.17
257 258 6.012337 ACCAAAAAGGGAAATGGTGAAATT 57.988 33.333 0.00 0.00 44.25 1.82
258 259 6.430864 ACCAAAAAGGGAAATGGTGAAATTT 58.569 32.000 0.00 0.00 44.25 1.82
259 260 6.894654 ACCAAAAAGGGAAATGGTGAAATTTT 59.105 30.769 0.00 0.00 44.25 1.82
260 261 7.068103 ACCAAAAAGGGAAATGGTGAAATTTTC 59.932 33.333 2.05 2.05 44.25 2.29
261 262 7.424803 CAAAAAGGGAAATGGTGAAATTTTCC 58.575 34.615 6.68 5.32 43.20 3.13
268 269 9.952030 GGGAAATGGTGAAATTTTCCTTATTAA 57.048 29.630 12.05 0.00 45.02 1.40
297 298 9.891828 GAAAAGGCAAAATTAAATTAGGTTTGG 57.108 29.630 10.46 0.37 31.36 3.28
298 299 9.634021 AAAAGGCAAAATTAAATTAGGTTTGGA 57.366 25.926 10.46 0.00 31.36 3.53
299 300 8.846943 AAGGCAAAATTAAATTAGGTTTGGAG 57.153 30.769 10.46 0.00 31.36 3.86
300 301 7.973402 AGGCAAAATTAAATTAGGTTTGGAGT 58.027 30.769 10.46 0.00 31.36 3.85
301 302 9.095700 AGGCAAAATTAAATTAGGTTTGGAGTA 57.904 29.630 10.46 0.00 31.36 2.59
302 303 9.713713 GGCAAAATTAAATTAGGTTTGGAGTAA 57.286 29.630 10.46 0.00 31.36 2.24
316 317 8.539544 AGGTTTGGAGTAATTCAATATTTTGGG 58.460 33.333 0.00 0.00 33.44 4.12
317 318 8.318412 GGTTTGGAGTAATTCAATATTTTGGGT 58.682 33.333 0.00 0.00 33.44 4.51
318 319 9.719355 GTTTGGAGTAATTCAATATTTTGGGTT 57.281 29.630 0.00 0.00 33.44 4.11
360 361 9.353999 CAAGTTTAATGCATGATGATATGATGG 57.646 33.333 0.00 0.00 0.00 3.51
361 362 7.544622 AGTTTAATGCATGATGATATGATGGC 58.455 34.615 0.00 0.00 0.00 4.40
362 363 7.177744 AGTTTAATGCATGATGATATGATGGCA 59.822 33.333 0.00 0.00 0.00 4.92
363 364 7.654022 TTAATGCATGATGATATGATGGCAT 57.346 32.000 0.00 0.00 38.54 4.40
364 365 4.981806 TGCATGATGATATGATGGCATG 57.018 40.909 3.81 0.00 35.94 4.06
365 366 4.594970 TGCATGATGATATGATGGCATGA 58.405 39.130 3.81 0.00 36.20 3.07
366 367 5.200483 TGCATGATGATATGATGGCATGAT 58.800 37.500 3.81 4.21 36.20 2.45
367 368 6.361433 TGCATGATGATATGATGGCATGATA 58.639 36.000 3.81 6.97 36.20 2.15
368 369 6.831353 TGCATGATGATATGATGGCATGATAA 59.169 34.615 10.67 0.00 36.20 1.75
369 370 7.505585 TGCATGATGATATGATGGCATGATAAT 59.494 33.333 10.67 1.11 36.20 1.28
370 371 7.809806 GCATGATGATATGATGGCATGATAATG 59.190 37.037 10.67 10.11 36.20 1.90
371 372 7.272037 TGATGATATGATGGCATGATAATGC 57.728 36.000 10.67 6.47 46.27 3.56
405 406 9.705290 AAAATAACAAGCAACAACTTAATAGGG 57.295 29.630 0.00 0.00 0.00 3.53
406 407 8.417273 AATAACAAGCAACAACTTAATAGGGT 57.583 30.769 0.00 0.00 0.00 4.34
407 408 9.523168 AATAACAAGCAACAACTTAATAGGGTA 57.477 29.630 0.00 0.00 0.00 3.69
408 409 6.812879 ACAAGCAACAACTTAATAGGGTAC 57.187 37.500 0.00 0.00 0.00 3.34
409 410 6.540083 ACAAGCAACAACTTAATAGGGTACT 58.460 36.000 0.00 0.00 0.00 2.73
410 411 7.682628 ACAAGCAACAACTTAATAGGGTACTA 58.317 34.615 0.00 0.00 0.00 1.82
411 412 7.605309 ACAAGCAACAACTTAATAGGGTACTAC 59.395 37.037 0.00 0.00 30.59 2.73
412 413 7.492077 AGCAACAACTTAATAGGGTACTACT 57.508 36.000 0.00 0.00 30.59 2.57
413 414 7.554211 AGCAACAACTTAATAGGGTACTACTC 58.446 38.462 0.00 0.00 30.59 2.59
414 415 7.399478 AGCAACAACTTAATAGGGTACTACTCT 59.601 37.037 0.00 0.00 31.14 3.24
415 416 7.491696 GCAACAACTTAATAGGGTACTACTCTG 59.508 40.741 0.00 0.00 27.79 3.35
416 417 7.657023 ACAACTTAATAGGGTACTACTCTGG 57.343 40.000 0.00 0.00 27.79 3.86
417 418 6.610425 ACAACTTAATAGGGTACTACTCTGGG 59.390 42.308 0.00 0.00 27.79 4.45
418 419 5.146298 ACTTAATAGGGTACTACTCTGGGC 58.854 45.833 0.00 0.00 27.79 5.36
419 420 3.995691 AATAGGGTACTACTCTGGGCT 57.004 47.619 0.00 0.00 27.79 5.19
420 421 2.750141 TAGGGTACTACTCTGGGCTG 57.250 55.000 0.00 0.00 27.79 4.85
421 422 0.711184 AGGGTACTACTCTGGGCTGT 59.289 55.000 0.00 0.00 0.00 4.40
422 423 1.078989 AGGGTACTACTCTGGGCTGTT 59.921 52.381 0.00 0.00 0.00 3.16
423 424 1.207329 GGGTACTACTCTGGGCTGTTG 59.793 57.143 0.00 0.00 0.00 3.33
424 425 1.405661 GGTACTACTCTGGGCTGTTGC 60.406 57.143 0.00 0.00 38.76 4.17
425 426 1.275291 GTACTACTCTGGGCTGTTGCA 59.725 52.381 0.00 0.00 41.91 4.08
426 427 0.035458 ACTACTCTGGGCTGTTGCAC 59.965 55.000 0.00 0.00 44.33 4.57
427 428 0.674895 CTACTCTGGGCTGTTGCACC 60.675 60.000 0.00 0.00 43.18 5.01
428 429 2.124507 TACTCTGGGCTGTTGCACCC 62.125 60.000 3.10 3.10 43.18 4.61
432 433 2.360475 GGGCTGTTGCACCCTCTC 60.360 66.667 2.83 0.00 43.36 3.20
433 434 2.753029 GGCTGTTGCACCCTCTCT 59.247 61.111 0.00 0.00 41.91 3.10
434 435 1.073897 GGCTGTTGCACCCTCTCTT 59.926 57.895 0.00 0.00 41.91 2.85
435 436 1.239968 GGCTGTTGCACCCTCTCTTG 61.240 60.000 0.00 0.00 41.91 3.02
436 437 0.250467 GCTGTTGCACCCTCTCTTGA 60.250 55.000 0.00 0.00 39.41 3.02
437 438 1.805869 CTGTTGCACCCTCTCTTGAG 58.194 55.000 0.00 0.00 39.92 3.02
438 439 1.345741 CTGTTGCACCCTCTCTTGAGA 59.654 52.381 0.13 0.13 42.73 3.27
439 440 1.070758 TGTTGCACCCTCTCTTGAGAC 59.929 52.381 0.00 0.00 42.73 3.36
440 441 1.346068 GTTGCACCCTCTCTTGAGACT 59.654 52.381 0.00 0.00 42.73 3.24
441 442 1.261480 TGCACCCTCTCTTGAGACTC 58.739 55.000 0.00 0.00 42.73 3.36
442 443 0.534873 GCACCCTCTCTTGAGACTCC 59.465 60.000 0.00 0.00 42.73 3.85
443 444 1.894978 GCACCCTCTCTTGAGACTCCT 60.895 57.143 0.00 0.00 42.73 3.69
444 445 2.534990 CACCCTCTCTTGAGACTCCTT 58.465 52.381 0.00 0.00 42.73 3.36
445 446 2.495669 CACCCTCTCTTGAGACTCCTTC 59.504 54.545 0.00 0.00 42.73 3.46
446 447 2.381961 ACCCTCTCTTGAGACTCCTTCT 59.618 50.000 0.00 0.00 42.73 2.85
447 448 3.181412 ACCCTCTCTTGAGACTCCTTCTT 60.181 47.826 0.00 0.00 42.73 2.52
448 449 4.044825 ACCCTCTCTTGAGACTCCTTCTTA 59.955 45.833 0.00 0.00 42.73 2.10
449 450 5.208121 CCCTCTCTTGAGACTCCTTCTTAT 58.792 45.833 0.00 0.00 42.73 1.73
450 451 5.301805 CCCTCTCTTGAGACTCCTTCTTATC 59.698 48.000 0.00 0.00 42.73 1.75
451 452 6.129179 CCTCTCTTGAGACTCCTTCTTATCT 58.871 44.000 0.00 0.00 42.73 1.98
452 453 6.607198 CCTCTCTTGAGACTCCTTCTTATCTT 59.393 42.308 0.00 0.00 42.73 2.40
453 454 7.124147 CCTCTCTTGAGACTCCTTCTTATCTTT 59.876 40.741 0.00 0.00 42.73 2.52
454 455 9.184523 CTCTCTTGAGACTCCTTCTTATCTTTA 57.815 37.037 0.00 0.00 42.73 1.85
455 456 9.707957 TCTCTTGAGACTCCTTCTTATCTTTAT 57.292 33.333 0.00 0.00 33.22 1.40
456 457 9.965824 CTCTTGAGACTCCTTCTTATCTTTATC 57.034 37.037 0.00 0.00 33.22 1.75
457 458 8.919145 TCTTGAGACTCCTTCTTATCTTTATCC 58.081 37.037 0.00 0.00 33.22 2.59
458 459 7.278461 TGAGACTCCTTCTTATCTTTATCCG 57.722 40.000 0.00 0.00 33.22 4.18
459 460 7.061054 TGAGACTCCTTCTTATCTTTATCCGA 58.939 38.462 0.00 0.00 33.22 4.55
460 461 7.013464 TGAGACTCCTTCTTATCTTTATCCGAC 59.987 40.741 0.00 0.00 33.22 4.79
461 462 6.265876 AGACTCCTTCTTATCTTTATCCGACC 59.734 42.308 0.00 0.00 0.00 4.79
462 463 5.897824 ACTCCTTCTTATCTTTATCCGACCA 59.102 40.000 0.00 0.00 0.00 4.02
463 464 6.555360 ACTCCTTCTTATCTTTATCCGACCAT 59.445 38.462 0.00 0.00 0.00 3.55
464 465 6.994221 TCCTTCTTATCTTTATCCGACCATC 58.006 40.000 0.00 0.00 0.00 3.51
465 466 6.782988 TCCTTCTTATCTTTATCCGACCATCT 59.217 38.462 0.00 0.00 0.00 2.90
466 467 7.039644 TCCTTCTTATCTTTATCCGACCATCTC 60.040 40.741 0.00 0.00 0.00 2.75
467 468 6.591750 TCTTATCTTTATCCGACCATCTCC 57.408 41.667 0.00 0.00 0.00 3.71
468 469 6.315714 TCTTATCTTTATCCGACCATCTCCT 58.684 40.000 0.00 0.00 0.00 3.69
469 470 7.467650 TCTTATCTTTATCCGACCATCTCCTA 58.532 38.462 0.00 0.00 0.00 2.94
470 471 5.986501 ATCTTTATCCGACCATCTCCTAC 57.013 43.478 0.00 0.00 0.00 3.18
471 472 4.800023 TCTTTATCCGACCATCTCCTACA 58.200 43.478 0.00 0.00 0.00 2.74
472 473 4.583489 TCTTTATCCGACCATCTCCTACAC 59.417 45.833 0.00 0.00 0.00 2.90
473 474 2.454336 ATCCGACCATCTCCTACACA 57.546 50.000 0.00 0.00 0.00 3.72
474 475 1.471119 TCCGACCATCTCCTACACAC 58.529 55.000 0.00 0.00 0.00 3.82
475 476 0.100682 CCGACCATCTCCTACACACG 59.899 60.000 0.00 0.00 0.00 4.49
476 477 0.525668 CGACCATCTCCTACACACGC 60.526 60.000 0.00 0.00 0.00 5.34
477 478 0.179108 GACCATCTCCTACACACGCC 60.179 60.000 0.00 0.00 0.00 5.68
478 479 0.902984 ACCATCTCCTACACACGCCA 60.903 55.000 0.00 0.00 0.00 5.69
479 480 0.460284 CCATCTCCTACACACGCCAC 60.460 60.000 0.00 0.00 0.00 5.01
480 481 0.246360 CATCTCCTACACACGCCACA 59.754 55.000 0.00 0.00 0.00 4.17
481 482 1.134699 CATCTCCTACACACGCCACAT 60.135 52.381 0.00 0.00 0.00 3.21
482 483 0.530744 TCTCCTACACACGCCACATC 59.469 55.000 0.00 0.00 0.00 3.06
483 484 0.460284 CTCCTACACACGCCACATCC 60.460 60.000 0.00 0.00 0.00 3.51
484 485 1.449601 CCTACACACGCCACATCCC 60.450 63.158 0.00 0.00 0.00 3.85
485 486 1.295101 CTACACACGCCACATCCCA 59.705 57.895 0.00 0.00 0.00 4.37
486 487 0.321210 CTACACACGCCACATCCCAA 60.321 55.000 0.00 0.00 0.00 4.12
487 488 0.108774 TACACACGCCACATCCCAAA 59.891 50.000 0.00 0.00 0.00 3.28
488 489 1.172180 ACACACGCCACATCCCAAAG 61.172 55.000 0.00 0.00 0.00 2.77
489 490 1.150536 ACACGCCACATCCCAAAGT 59.849 52.632 0.00 0.00 0.00 2.66
490 491 0.889186 ACACGCCACATCCCAAAGTC 60.889 55.000 0.00 0.00 0.00 3.01
491 492 0.606401 CACGCCACATCCCAAAGTCT 60.606 55.000 0.00 0.00 0.00 3.24
492 493 0.110486 ACGCCACATCCCAAAGTCTT 59.890 50.000 0.00 0.00 0.00 3.01
493 494 0.523072 CGCCACATCCCAAAGTCTTG 59.477 55.000 0.00 0.00 0.00 3.02
494 495 1.620822 GCCACATCCCAAAGTCTTGT 58.379 50.000 0.00 0.00 0.00 3.16
495 496 1.963515 GCCACATCCCAAAGTCTTGTT 59.036 47.619 0.00 0.00 0.00 2.83
496 497 3.153919 GCCACATCCCAAAGTCTTGTTA 58.846 45.455 0.00 0.00 0.00 2.41
497 498 3.763897 GCCACATCCCAAAGTCTTGTTAT 59.236 43.478 0.00 0.00 0.00 1.89
498 499 4.947388 GCCACATCCCAAAGTCTTGTTATA 59.053 41.667 0.00 0.00 0.00 0.98
499 500 5.594317 GCCACATCCCAAAGTCTTGTTATAT 59.406 40.000 0.00 0.00 0.00 0.86
500 501 6.460123 GCCACATCCCAAAGTCTTGTTATATG 60.460 42.308 0.00 0.00 0.00 1.78
501 502 6.460123 CCACATCCCAAAGTCTTGTTATATGC 60.460 42.308 0.00 0.00 0.00 3.14
502 503 5.594317 ACATCCCAAAGTCTTGTTATATGCC 59.406 40.000 0.00 0.00 0.00 4.40
503 504 5.450818 TCCCAAAGTCTTGTTATATGCCT 57.549 39.130 0.00 0.00 0.00 4.75
504 505 5.826643 TCCCAAAGTCTTGTTATATGCCTT 58.173 37.500 0.00 0.00 0.00 4.35
505 506 6.252995 TCCCAAAGTCTTGTTATATGCCTTT 58.747 36.000 0.00 0.00 0.00 3.11
506 507 6.723977 TCCCAAAGTCTTGTTATATGCCTTTT 59.276 34.615 0.00 0.00 0.00 2.27
507 508 7.035612 CCCAAAGTCTTGTTATATGCCTTTTC 58.964 38.462 0.00 0.00 0.00 2.29
508 509 7.093771 CCCAAAGTCTTGTTATATGCCTTTTCT 60.094 37.037 0.00 0.00 0.00 2.52
509 510 8.306761 CCAAAGTCTTGTTATATGCCTTTTCTT 58.693 33.333 0.00 0.00 0.00 2.52
510 511 9.132521 CAAAGTCTTGTTATATGCCTTTTCTTG 57.867 33.333 0.00 0.00 0.00 3.02
511 512 6.856895 AGTCTTGTTATATGCCTTTTCTTGC 58.143 36.000 0.00 0.00 0.00 4.01
557 558 3.738281 GCATACAAGGCGACATAGAGTGT 60.738 47.826 0.00 0.00 45.83 3.55
578 579 1.283793 CGCACAAGGAAAGCACCAG 59.716 57.895 0.00 0.00 0.00 4.00
589 590 3.370953 GGAAAGCACCAGAGTGGATATGT 60.371 47.826 0.00 0.00 44.69 2.29
605 606 8.816894 AGTGGATATGTTCACTCTCTTTTCTTA 58.183 33.333 0.00 0.00 39.77 2.10
633 634 9.231297 CAAAGATCTTCTACCTTTATTGGAACA 57.769 33.333 8.78 0.00 0.00 3.18
635 636 7.042335 AGATCTTCTACCTTTATTGGAACACG 58.958 38.462 0.00 0.00 39.29 4.49
642 643 9.976511 TCTACCTTTATTGGAACACGATAATAG 57.023 33.333 0.00 0.00 39.29 1.73
673 678 9.620259 ATCATTTAACCAGAGAGGAATAAGTTC 57.380 33.333 0.00 0.00 41.22 3.01
710 715 3.261137 GGTAGGAGTAAGCTCAAGTGGTT 59.739 47.826 0.00 0.00 43.37 3.67
855 870 4.025401 GGCCCGACAACGCACTTG 62.025 66.667 0.00 0.00 38.29 3.16
1040 1056 2.041819 GTCCTCCTCCCGTCCCAT 60.042 66.667 0.00 0.00 0.00 4.00
1084 1100 1.529713 TTTGACTTCGGGGCCAACC 60.530 57.895 4.39 0.00 39.11 3.77
1224 1240 1.383109 TCATCAGCCATCCCCGTCT 60.383 57.895 0.00 0.00 0.00 4.18
1446 1462 1.098050 CCAAGCCTTCAAGCGCTAAT 58.902 50.000 12.05 0.00 38.01 1.73
1944 1960 3.573491 GCGGCGAGTAATGGTGGC 61.573 66.667 12.98 0.00 0.00 5.01
2253 2269 3.786635 CGAGTACAAGAAGGCTATTGCT 58.213 45.455 11.19 3.20 39.59 3.91
2290 2306 5.968676 ATTACAATGGCACCTCTACCTAA 57.031 39.130 0.00 0.00 0.00 2.69
2341 2357 1.676006 GTTTGTACTGTGCAGGTGCTT 59.324 47.619 3.18 0.00 42.66 3.91
2363 2379 5.164620 TGAGCAAGATAAGGACAATGTGA 57.835 39.130 0.00 0.00 0.00 3.58
2365 2381 4.910195 AGCAAGATAAGGACAATGTGACA 58.090 39.130 0.00 0.00 0.00 3.58
2542 2558 3.994931 AGTTCCCTTATGTACCACCAC 57.005 47.619 0.00 0.00 0.00 4.16
2560 2576 5.188434 CACCACTGTAATCATCCTTGACAT 58.812 41.667 0.00 0.00 33.85 3.06
2840 2866 3.429085 GTGATGCTATTTCGCACTTTGG 58.571 45.455 0.00 0.00 43.61 3.28
2947 2974 6.971726 ACATAGGTTCTGGAACATCGTATA 57.028 37.500 14.25 0.00 42.85 1.47
3008 3035 6.204688 TGTCTAATTGCCTTTGTAGAAGTGTG 59.795 38.462 0.00 0.00 0.00 3.82
3011 3038 0.881796 GCCTTTGTAGAAGTGTGCCC 59.118 55.000 0.00 0.00 0.00 5.36
3013 3040 1.270625 CCTTTGTAGAAGTGTGCCCGA 60.271 52.381 0.00 0.00 0.00 5.14
3040 3067 9.029243 CAGTTGTAATGTTGCAAATTTCTAACA 57.971 29.630 15.30 15.30 34.63 2.41
3112 3139 5.003096 TCTCTCCAGAGACCATATGCATA 57.997 43.478 9.27 9.27 45.48 3.14
3121 3148 7.119407 CCAGAGACCATATGCATATTTGAGAAG 59.881 40.741 16.71 3.93 0.00 2.85
3202 3230 9.783081 AACAAAAGGATCAAATTAGCTTTCATT 57.217 25.926 0.00 0.00 0.00 2.57
3265 3293 1.336240 GGTTGCTTTGCAGTCCATGAC 60.336 52.381 0.00 0.00 40.61 3.06
3386 3415 9.452287 ACAAATTTCAGGCTATGCAAATTATTT 57.548 25.926 0.00 0.00 32.82 1.40
3388 3417 8.441312 AATTTCAGGCTATGCAAATTATTTGG 57.559 30.769 17.89 4.00 40.94 3.28
3390 3419 6.543430 TCAGGCTATGCAAATTATTTGGTT 57.457 33.333 17.89 0.00 40.94 3.67
3391 3420 6.339730 TCAGGCTATGCAAATTATTTGGTTG 58.660 36.000 17.89 6.10 40.94 3.77
3394 3423 5.118286 GCTATGCAAATTATTTGGTTGCCT 58.882 37.500 17.89 1.86 45.60 4.75
3396 3425 6.760770 GCTATGCAAATTATTTGGTTGCCTAA 59.239 34.615 17.89 0.00 45.60 2.69
3397 3426 7.042523 GCTATGCAAATTATTTGGTTGCCTAAG 60.043 37.037 17.89 4.70 45.60 2.18
3398 3427 6.352016 TGCAAATTATTTGGTTGCCTAAGA 57.648 33.333 17.89 0.00 45.60 2.10
3399 3428 6.397272 TGCAAATTATTTGGTTGCCTAAGAG 58.603 36.000 17.89 0.00 45.60 2.85
3402 3431 8.032451 GCAAATTATTTGGTTGCCTAAGAGTTA 58.968 33.333 17.89 0.00 41.41 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.354403 CCCTCCAACACCTTTAGTACCG 60.354 54.545 0.00 0.00 0.00 4.02
1 2 2.026542 CCCCTCCAACACCTTTAGTACC 60.027 54.545 0.00 0.00 0.00 3.34
2 3 2.617276 GCCCCTCCAACACCTTTAGTAC 60.617 54.545 0.00 0.00 0.00 2.73
3 4 1.631898 GCCCCTCCAACACCTTTAGTA 59.368 52.381 0.00 0.00 0.00 1.82
4 5 0.404426 GCCCCTCCAACACCTTTAGT 59.596 55.000 0.00 0.00 0.00 2.24
5 6 0.323451 GGCCCCTCCAACACCTTTAG 60.323 60.000 0.00 0.00 34.01 1.85
6 7 1.771646 GGCCCCTCCAACACCTTTA 59.228 57.895 0.00 0.00 34.01 1.85
7 8 2.526110 GGCCCCTCCAACACCTTT 59.474 61.111 0.00 0.00 34.01 3.11
8 9 3.590574 GGGCCCCTCCAACACCTT 61.591 66.667 12.23 0.00 36.21 3.50
11 12 4.366684 CTGGGGCCCCTCCAACAC 62.367 72.222 40.66 13.21 36.21 3.32
12 13 4.608514 TCTGGGGCCCCTCCAACA 62.609 66.667 40.66 19.55 36.21 3.33
13 14 4.048470 GTCTGGGGCCCCTCCAAC 62.048 72.222 40.66 26.99 36.21 3.77
14 15 4.285790 AGTCTGGGGCCCCTCCAA 62.286 66.667 40.66 20.79 36.21 3.53
16 17 4.741239 TCAGTCTGGGGCCCCTCC 62.741 72.222 40.66 26.84 36.94 4.30
17 18 3.403558 GTCAGTCTGGGGCCCCTC 61.404 72.222 40.66 28.53 36.94 4.30
18 19 3.810687 TTGTCAGTCTGGGGCCCCT 62.811 63.158 40.66 19.50 36.94 4.79
19 20 3.256960 TTGTCAGTCTGGGGCCCC 61.257 66.667 36.14 36.14 0.00 5.80
20 21 2.034221 GTTGTCAGTCTGGGGCCC 59.966 66.667 18.17 18.17 0.00 5.80
21 22 0.678048 GATGTTGTCAGTCTGGGGCC 60.678 60.000 0.00 0.00 0.00 5.80
22 23 0.678048 GGATGTTGTCAGTCTGGGGC 60.678 60.000 0.00 0.00 0.00 5.80
23 24 0.987294 AGGATGTTGTCAGTCTGGGG 59.013 55.000 0.00 0.00 0.00 4.96
24 25 1.947678 GCAGGATGTTGTCAGTCTGGG 60.948 57.143 0.00 0.00 39.31 4.45
25 26 1.446907 GCAGGATGTTGTCAGTCTGG 58.553 55.000 0.00 0.00 39.31 3.86
26 27 1.271001 TGGCAGGATGTTGTCAGTCTG 60.271 52.381 0.00 0.00 39.31 3.51
27 28 1.059098 TGGCAGGATGTTGTCAGTCT 58.941 50.000 0.00 0.00 39.31 3.24
28 29 1.160137 GTGGCAGGATGTTGTCAGTC 58.840 55.000 0.00 0.00 39.31 3.51
29 30 0.250901 GGTGGCAGGATGTTGTCAGT 60.251 55.000 0.00 0.00 39.31 3.41
30 31 0.250858 TGGTGGCAGGATGTTGTCAG 60.251 55.000 0.00 0.00 39.31 3.51
31 32 0.537143 GTGGTGGCAGGATGTTGTCA 60.537 55.000 0.00 0.00 39.31 3.58
32 33 0.250901 AGTGGTGGCAGGATGTTGTC 60.251 55.000 0.00 0.00 39.31 3.18
33 34 0.250901 GAGTGGTGGCAGGATGTTGT 60.251 55.000 0.00 0.00 39.31 3.32
34 35 0.037303 AGAGTGGTGGCAGGATGTTG 59.963 55.000 0.00 0.00 39.31 3.33
35 36 0.037303 CAGAGTGGTGGCAGGATGTT 59.963 55.000 0.00 0.00 39.31 2.71
36 37 1.130054 ACAGAGTGGTGGCAGGATGT 61.130 55.000 0.00 0.00 39.31 3.06
37 38 0.037303 AACAGAGTGGTGGCAGGATG 59.963 55.000 0.00 0.00 40.87 3.51
38 39 0.773644 AAACAGAGTGGTGGCAGGAT 59.226 50.000 0.00 0.00 0.00 3.24
39 40 1.347707 CTAAACAGAGTGGTGGCAGGA 59.652 52.381 0.00 0.00 0.00 3.86
40 41 1.813513 CTAAACAGAGTGGTGGCAGG 58.186 55.000 0.00 0.00 0.00 4.85
41 42 1.160137 GCTAAACAGAGTGGTGGCAG 58.840 55.000 0.00 0.00 0.00 4.85
42 43 0.472044 TGCTAAACAGAGTGGTGGCA 59.528 50.000 0.00 0.00 0.00 4.92
43 44 0.875059 GTGCTAAACAGAGTGGTGGC 59.125 55.000 0.00 0.00 0.00 5.01
44 45 1.523758 GGTGCTAAACAGAGTGGTGG 58.476 55.000 0.00 0.00 0.00 4.61
45 46 1.148310 CGGTGCTAAACAGAGTGGTG 58.852 55.000 0.00 0.00 0.00 4.17
46 47 0.034896 CCGGTGCTAAACAGAGTGGT 59.965 55.000 0.00 0.00 0.00 4.16
47 48 0.034896 ACCGGTGCTAAACAGAGTGG 59.965 55.000 6.12 0.00 0.00 4.00
48 49 1.798813 GAACCGGTGCTAAACAGAGTG 59.201 52.381 8.52 0.00 0.00 3.51
49 50 1.604693 CGAACCGGTGCTAAACAGAGT 60.605 52.381 8.52 0.00 0.00 3.24
50 51 1.068474 CGAACCGGTGCTAAACAGAG 58.932 55.000 8.52 0.00 0.00 3.35
51 52 0.390124 ACGAACCGGTGCTAAACAGA 59.610 50.000 8.52 0.00 0.00 3.41
52 53 0.511221 CACGAACCGGTGCTAAACAG 59.489 55.000 8.52 0.00 0.00 3.16
53 54 0.179078 ACACGAACCGGTGCTAAACA 60.179 50.000 8.52 0.00 41.65 2.83
54 55 0.509929 GACACGAACCGGTGCTAAAC 59.490 55.000 8.52 0.00 41.65 2.01
55 56 0.104487 TGACACGAACCGGTGCTAAA 59.896 50.000 8.52 0.00 41.65 1.85
56 57 0.598158 GTGACACGAACCGGTGCTAA 60.598 55.000 8.52 0.00 41.65 3.09
57 58 1.007038 GTGACACGAACCGGTGCTA 60.007 57.895 8.52 0.00 41.65 3.49
58 59 2.279918 GTGACACGAACCGGTGCT 60.280 61.111 8.52 0.00 41.65 4.40
59 60 3.698463 CGTGACACGAACCGGTGC 61.698 66.667 23.39 4.53 46.05 5.01
68 69 2.736343 TAGCACCGGTTCGTGACACG 62.736 60.000 21.88 21.88 44.19 4.49
69 70 0.598158 TTAGCACCGGTTCGTGACAC 60.598 55.000 2.97 0.00 35.68 3.67
70 71 0.104487 TTTAGCACCGGTTCGTGACA 59.896 50.000 2.97 0.00 35.68 3.58
71 72 0.788391 CTTTAGCACCGGTTCGTGAC 59.212 55.000 2.97 0.00 35.68 3.67
72 73 0.320073 CCTTTAGCACCGGTTCGTGA 60.320 55.000 2.97 0.00 35.68 4.35
73 74 0.601841 ACCTTTAGCACCGGTTCGTG 60.602 55.000 2.97 0.00 36.80 4.35
74 75 0.107268 AACCTTTAGCACCGGTTCGT 59.893 50.000 2.97 0.00 36.32 3.85
75 76 0.794473 GAACCTTTAGCACCGGTTCG 59.206 55.000 2.97 0.00 44.86 3.95
77 78 1.232621 GCGAACCTTTAGCACCGGTT 61.233 55.000 2.97 0.00 43.32 4.44
78 79 1.670083 GCGAACCTTTAGCACCGGT 60.670 57.895 0.00 0.00 0.00 5.28
79 80 2.396157 GGCGAACCTTTAGCACCGG 61.396 63.158 0.00 0.00 0.00 5.28
80 81 1.669760 TGGCGAACCTTTAGCACCG 60.670 57.895 0.00 0.00 36.63 4.94
81 82 1.873863 GTGGCGAACCTTTAGCACC 59.126 57.895 0.00 0.00 36.63 5.01
82 83 0.947180 TCGTGGCGAACCTTTAGCAC 60.947 55.000 0.00 0.00 36.63 4.40
83 84 0.249953 TTCGTGGCGAACCTTTAGCA 60.250 50.000 0.00 0.00 41.05 3.49
84 85 2.535588 TTCGTGGCGAACCTTTAGC 58.464 52.632 0.00 0.00 41.05 3.09
92 93 1.240641 TAGTACCGGTTCGTGGCGAA 61.241 55.000 15.04 0.00 43.75 4.70
93 94 1.240641 TTAGTACCGGTTCGTGGCGA 61.241 55.000 15.04 0.00 0.00 5.54
94 95 0.179129 ATTAGTACCGGTTCGTGGCG 60.179 55.000 15.04 0.00 0.00 5.69
95 96 1.135024 TCATTAGTACCGGTTCGTGGC 60.135 52.381 15.04 0.00 0.00 5.01
96 97 2.424601 TCTCATTAGTACCGGTTCGTGG 59.575 50.000 15.04 0.29 0.00 4.94
97 98 3.128242 ACTCTCATTAGTACCGGTTCGTG 59.872 47.826 15.04 10.08 0.00 4.35
98 99 3.128242 CACTCTCATTAGTACCGGTTCGT 59.872 47.826 15.04 0.00 0.00 3.85
99 100 3.488721 CCACTCTCATTAGTACCGGTTCG 60.489 52.174 15.04 0.00 0.00 3.95
100 101 3.737355 GCCACTCTCATTAGTACCGGTTC 60.737 52.174 15.04 8.12 0.00 3.62
101 102 2.167900 GCCACTCTCATTAGTACCGGTT 59.832 50.000 15.04 0.00 0.00 4.44
102 103 1.755380 GCCACTCTCATTAGTACCGGT 59.245 52.381 13.98 13.98 0.00 5.28
103 104 1.068741 GGCCACTCTCATTAGTACCGG 59.931 57.143 0.00 0.00 0.00 5.28
104 105 1.068741 GGGCCACTCTCATTAGTACCG 59.931 57.143 4.39 0.00 0.00 4.02
105 106 1.068741 CGGGCCACTCTCATTAGTACC 59.931 57.143 4.39 0.00 0.00 3.34
106 107 1.538419 GCGGGCCACTCTCATTAGTAC 60.538 57.143 4.39 0.00 0.00 2.73
107 108 0.750850 GCGGGCCACTCTCATTAGTA 59.249 55.000 4.39 0.00 0.00 1.82
108 109 1.522569 GCGGGCCACTCTCATTAGT 59.477 57.895 4.39 0.00 0.00 2.24
109 110 1.227674 GGCGGGCCACTCTCATTAG 60.228 63.158 4.39 0.00 35.81 1.73
110 111 0.397957 TAGGCGGGCCACTCTCATTA 60.398 55.000 12.97 0.00 38.92 1.90
111 112 1.689233 TAGGCGGGCCACTCTCATT 60.689 57.895 12.97 0.00 38.92 2.57
112 113 2.041922 TAGGCGGGCCACTCTCAT 60.042 61.111 12.97 0.00 38.92 2.90
113 114 2.759973 CTAGGCGGGCCACTCTCA 60.760 66.667 12.97 0.00 38.92 3.27
114 115 4.228567 GCTAGGCGGGCCACTCTC 62.229 72.222 12.97 0.00 38.92 3.20
122 123 3.400599 ATTCCAACGGCTAGGCGGG 62.401 63.158 37.39 29.67 33.14 6.13
123 124 1.887707 GATTCCAACGGCTAGGCGG 60.888 63.158 37.39 22.89 35.02 6.13
124 125 2.237751 CGATTCCAACGGCTAGGCG 61.238 63.158 34.16 34.16 0.00 5.52
125 126 1.887707 CCGATTCCAACGGCTAGGC 60.888 63.158 6.15 6.15 43.74 3.93
126 127 4.438346 CCGATTCCAACGGCTAGG 57.562 61.111 0.00 0.00 43.74 3.02
132 133 2.276201 TCATTAGTGCCGATTCCAACG 58.724 47.619 0.00 0.00 0.00 4.10
133 134 3.876914 TGATCATTAGTGCCGATTCCAAC 59.123 43.478 0.00 0.00 0.00 3.77
134 135 3.876914 GTGATCATTAGTGCCGATTCCAA 59.123 43.478 0.00 0.00 0.00 3.53
135 136 3.118445 TGTGATCATTAGTGCCGATTCCA 60.118 43.478 0.00 0.00 0.00 3.53
136 137 3.466836 TGTGATCATTAGTGCCGATTCC 58.533 45.455 0.00 0.00 0.00 3.01
137 138 5.928839 ACTATGTGATCATTAGTGCCGATTC 59.071 40.000 16.31 0.00 35.70 2.52
138 139 5.698089 CACTATGTGATCATTAGTGCCGATT 59.302 40.000 24.24 3.00 35.23 3.34
139 140 5.233225 CACTATGTGATCATTAGTGCCGAT 58.767 41.667 24.24 3.51 35.23 4.18
140 141 4.620982 CACTATGTGATCATTAGTGCCGA 58.379 43.478 24.24 0.00 35.23 5.54
141 142 3.185188 GCACTATGTGATCATTAGTGCCG 59.815 47.826 35.53 20.59 44.28 5.69
142 143 4.739046 GCACTATGTGATCATTAGTGCC 57.261 45.455 35.53 26.23 44.28 5.01
143 144 3.185188 CGGCACTATGTGATCATTAGTGC 59.815 47.826 36.48 36.48 46.14 4.40
144 145 3.742882 CCGGCACTATGTGATCATTAGTG 59.257 47.826 27.90 27.90 37.93 2.74
145 146 3.803715 GCCGGCACTATGTGATCATTAGT 60.804 47.826 24.80 12.94 35.23 2.24
146 147 2.738846 GCCGGCACTATGTGATCATTAG 59.261 50.000 24.80 6.40 35.23 1.73
147 148 2.368548 AGCCGGCACTATGTGATCATTA 59.631 45.455 31.54 0.00 35.23 1.90
148 149 1.141657 AGCCGGCACTATGTGATCATT 59.858 47.619 31.54 0.00 35.23 2.57
149 150 0.761187 AGCCGGCACTATGTGATCAT 59.239 50.000 31.54 0.00 35.23 2.45
150 151 0.104855 GAGCCGGCACTATGTGATCA 59.895 55.000 31.54 0.00 35.23 2.92
151 152 0.104855 TGAGCCGGCACTATGTGATC 59.895 55.000 31.54 14.56 35.23 2.92
152 153 0.541392 TTGAGCCGGCACTATGTGAT 59.459 50.000 31.54 3.33 35.23 3.06
153 154 0.323302 TTTGAGCCGGCACTATGTGA 59.677 50.000 31.54 1.44 35.23 3.58
154 155 1.382522 ATTTGAGCCGGCACTATGTG 58.617 50.000 31.54 0.00 36.51 3.21
155 156 2.093181 TGTATTTGAGCCGGCACTATGT 60.093 45.455 31.54 13.37 0.00 2.29
156 157 2.560504 TGTATTTGAGCCGGCACTATG 58.439 47.619 31.54 0.00 0.00 2.23
157 158 3.275617 TTGTATTTGAGCCGGCACTAT 57.724 42.857 31.54 20.94 0.00 2.12
158 159 2.745281 GTTTGTATTTGAGCCGGCACTA 59.255 45.455 31.54 17.63 0.00 2.74
159 160 1.539827 GTTTGTATTTGAGCCGGCACT 59.460 47.619 31.54 9.09 0.00 4.40
160 161 1.402325 GGTTTGTATTTGAGCCGGCAC 60.402 52.381 31.54 24.60 0.00 5.01
161 162 0.885196 GGTTTGTATTTGAGCCGGCA 59.115 50.000 31.54 8.23 0.00 5.69
162 163 0.179174 CGGTTTGTATTTGAGCCGGC 60.179 55.000 21.89 21.89 36.05 6.13
163 164 1.396996 CTCGGTTTGTATTTGAGCCGG 59.603 52.381 0.00 0.00 39.64 6.13
164 165 2.093783 GTCTCGGTTTGTATTTGAGCCG 59.906 50.000 0.00 0.00 40.43 5.52
165 166 3.335579 AGTCTCGGTTTGTATTTGAGCC 58.664 45.455 0.00 0.00 0.00 4.70
166 167 6.312918 TCATTAGTCTCGGTTTGTATTTGAGC 59.687 38.462 0.00 0.00 0.00 4.26
167 168 7.464710 GCTCATTAGTCTCGGTTTGTATTTGAG 60.465 40.741 0.00 0.00 0.00 3.02
168 169 6.312918 GCTCATTAGTCTCGGTTTGTATTTGA 59.687 38.462 0.00 0.00 0.00 2.69
169 170 6.313905 AGCTCATTAGTCTCGGTTTGTATTTG 59.686 38.462 0.00 0.00 0.00 2.32
170 171 6.313905 CAGCTCATTAGTCTCGGTTTGTATTT 59.686 38.462 0.00 0.00 0.00 1.40
171 172 5.812642 CAGCTCATTAGTCTCGGTTTGTATT 59.187 40.000 0.00 0.00 0.00 1.89
172 173 5.127194 TCAGCTCATTAGTCTCGGTTTGTAT 59.873 40.000 0.00 0.00 0.00 2.29
173 174 4.461431 TCAGCTCATTAGTCTCGGTTTGTA 59.539 41.667 0.00 0.00 0.00 2.41
174 175 3.258372 TCAGCTCATTAGTCTCGGTTTGT 59.742 43.478 0.00 0.00 0.00 2.83
175 176 3.849911 TCAGCTCATTAGTCTCGGTTTG 58.150 45.455 0.00 0.00 0.00 2.93
176 177 4.246458 GTTCAGCTCATTAGTCTCGGTTT 58.754 43.478 0.00 0.00 0.00 3.27
177 178 3.258372 TGTTCAGCTCATTAGTCTCGGTT 59.742 43.478 0.00 0.00 0.00 4.44
178 179 2.826128 TGTTCAGCTCATTAGTCTCGGT 59.174 45.455 0.00 0.00 0.00 4.69
179 180 3.510388 TGTTCAGCTCATTAGTCTCGG 57.490 47.619 0.00 0.00 0.00 4.63
180 181 5.689514 CCTAATGTTCAGCTCATTAGTCTCG 59.310 44.000 22.48 10.66 46.13 4.04
181 182 5.465056 GCCTAATGTTCAGCTCATTAGTCTC 59.535 44.000 22.48 13.01 46.13 3.36
182 183 5.363939 GCCTAATGTTCAGCTCATTAGTCT 58.636 41.667 22.48 0.00 46.13 3.24
183 184 4.513318 GGCCTAATGTTCAGCTCATTAGTC 59.487 45.833 22.48 15.12 46.13 2.59
184 185 4.455606 GGCCTAATGTTCAGCTCATTAGT 58.544 43.478 22.48 0.00 46.13 2.24
185 186 3.817647 GGGCCTAATGTTCAGCTCATTAG 59.182 47.826 19.59 19.59 46.64 1.73
186 187 3.459598 AGGGCCTAATGTTCAGCTCATTA 59.540 43.478 2.82 6.27 36.92 1.90
187 188 2.243221 AGGGCCTAATGTTCAGCTCATT 59.757 45.455 2.82 4.70 38.72 2.57
188 189 1.849039 AGGGCCTAATGTTCAGCTCAT 59.151 47.619 2.82 0.00 0.00 2.90
189 190 1.289160 AGGGCCTAATGTTCAGCTCA 58.711 50.000 2.82 0.00 0.00 4.26
190 191 2.426842 AAGGGCCTAATGTTCAGCTC 57.573 50.000 6.41 0.00 0.00 4.09
191 192 2.907458 AAAGGGCCTAATGTTCAGCT 57.093 45.000 6.41 0.00 0.00 4.24
192 193 3.961480 AAAAAGGGCCTAATGTTCAGC 57.039 42.857 6.41 0.00 0.00 4.26
209 210 9.211485 GTGTTAGGTAATGCACTAGTAGAAAAA 57.789 33.333 3.59 0.00 0.00 1.94
210 211 7.820872 GGTGTTAGGTAATGCACTAGTAGAAAA 59.179 37.037 3.59 0.00 32.90 2.29
211 212 7.038870 TGGTGTTAGGTAATGCACTAGTAGAAA 60.039 37.037 3.59 0.00 32.90 2.52
212 213 6.438108 TGGTGTTAGGTAATGCACTAGTAGAA 59.562 38.462 3.59 0.00 32.90 2.10
213 214 5.953548 TGGTGTTAGGTAATGCACTAGTAGA 59.046 40.000 3.59 0.00 32.90 2.59
214 215 6.216801 TGGTGTTAGGTAATGCACTAGTAG 57.783 41.667 0.00 0.00 32.90 2.57
215 216 6.608539 TTGGTGTTAGGTAATGCACTAGTA 57.391 37.500 0.00 0.00 32.90 1.82
216 217 5.492855 TTGGTGTTAGGTAATGCACTAGT 57.507 39.130 0.00 0.00 32.90 2.57
217 218 6.811253 TTTTGGTGTTAGGTAATGCACTAG 57.189 37.500 0.00 0.00 32.90 2.57
218 219 6.207810 CCTTTTTGGTGTTAGGTAATGCACTA 59.792 38.462 0.00 0.00 32.90 2.74
219 220 5.010617 CCTTTTTGGTGTTAGGTAATGCACT 59.989 40.000 0.00 0.00 32.90 4.40
220 221 5.227152 CCTTTTTGGTGTTAGGTAATGCAC 58.773 41.667 0.00 0.00 0.00 4.57
221 222 4.282195 CCCTTTTTGGTGTTAGGTAATGCA 59.718 41.667 0.00 0.00 0.00 3.96
222 223 4.525100 TCCCTTTTTGGTGTTAGGTAATGC 59.475 41.667 0.00 0.00 0.00 3.56
223 224 6.658188 TTCCCTTTTTGGTGTTAGGTAATG 57.342 37.500 0.00 0.00 0.00 1.90
224 225 7.256511 CCATTTCCCTTTTTGGTGTTAGGTAAT 60.257 37.037 0.00 0.00 0.00 1.89
225 226 6.042208 CCATTTCCCTTTTTGGTGTTAGGTAA 59.958 38.462 0.00 0.00 0.00 2.85
226 227 5.540719 CCATTTCCCTTTTTGGTGTTAGGTA 59.459 40.000 0.00 0.00 0.00 3.08
227 228 4.346709 CCATTTCCCTTTTTGGTGTTAGGT 59.653 41.667 0.00 0.00 0.00 3.08
228 229 4.346709 ACCATTTCCCTTTTTGGTGTTAGG 59.653 41.667 0.00 0.00 40.87 2.69
229 230 5.545063 ACCATTTCCCTTTTTGGTGTTAG 57.455 39.130 0.00 0.00 40.87 2.34
234 235 5.645056 ATTTCACCATTTCCCTTTTTGGT 57.355 34.783 0.00 0.00 43.14 3.67
235 236 6.957920 AAATTTCACCATTTCCCTTTTTGG 57.042 33.333 0.00 0.00 35.31 3.28
236 237 7.424803 GGAAAATTTCACCATTTCCCTTTTTG 58.575 34.615 8.09 0.00 44.02 2.44
237 238 7.581213 GGAAAATTTCACCATTTCCCTTTTT 57.419 32.000 8.09 0.00 44.02 1.94
271 272 9.891828 CCAAACCTAATTTAATTTTGCCTTTTC 57.108 29.630 0.00 0.00 0.00 2.29
272 273 9.634021 TCCAAACCTAATTTAATTTTGCCTTTT 57.366 25.926 0.00 0.00 0.00 2.27
273 274 9.283768 CTCCAAACCTAATTTAATTTTGCCTTT 57.716 29.630 0.00 0.00 0.00 3.11
274 275 8.436778 ACTCCAAACCTAATTTAATTTTGCCTT 58.563 29.630 0.00 0.00 0.00 4.35
275 276 7.973402 ACTCCAAACCTAATTTAATTTTGCCT 58.027 30.769 0.00 0.00 0.00 4.75
276 277 9.713713 TTACTCCAAACCTAATTTAATTTTGCC 57.286 29.630 0.00 0.00 0.00 4.52
290 291 8.539544 CCCAAAATATTGAATTACTCCAAACCT 58.460 33.333 0.00 0.00 38.94 3.50
291 292 8.318412 ACCCAAAATATTGAATTACTCCAAACC 58.682 33.333 0.00 0.00 38.94 3.27
292 293 9.719355 AACCCAAAATATTGAATTACTCCAAAC 57.281 29.630 0.00 0.00 38.94 2.93
334 335 9.353999 CCATCATATCATCATGCATTAAACTTG 57.646 33.333 0.00 0.00 0.00 3.16
335 336 8.033038 GCCATCATATCATCATGCATTAAACTT 58.967 33.333 0.00 0.00 0.00 2.66
336 337 7.177744 TGCCATCATATCATCATGCATTAAACT 59.822 33.333 0.00 0.00 0.00 2.66
337 338 7.317390 TGCCATCATATCATCATGCATTAAAC 58.683 34.615 0.00 0.00 0.00 2.01
338 339 7.469537 TGCCATCATATCATCATGCATTAAA 57.530 32.000 0.00 0.00 0.00 1.52
339 340 7.340743 TCATGCCATCATATCATCATGCATTAA 59.659 33.333 0.00 0.00 33.39 1.40
340 341 6.831353 TCATGCCATCATATCATCATGCATTA 59.169 34.615 0.00 0.00 33.39 1.90
341 342 5.656416 TCATGCCATCATATCATCATGCATT 59.344 36.000 0.00 0.00 33.39 3.56
342 343 5.200483 TCATGCCATCATATCATCATGCAT 58.800 37.500 0.00 0.00 33.39 3.96
343 344 4.594970 TCATGCCATCATATCATCATGCA 58.405 39.130 0.00 0.00 33.39 3.96
344 345 5.774498 ATCATGCCATCATATCATCATGC 57.226 39.130 0.00 0.00 33.39 4.06
379 380 9.705290 CCCTATTAAGTTGTTGCTTGTTATTTT 57.295 29.630 0.00 0.00 0.00 1.82
380 381 8.866093 ACCCTATTAAGTTGTTGCTTGTTATTT 58.134 29.630 0.00 0.00 0.00 1.40
381 382 8.417273 ACCCTATTAAGTTGTTGCTTGTTATT 57.583 30.769 0.00 0.00 0.00 1.40
382 383 8.953313 GTACCCTATTAAGTTGTTGCTTGTTAT 58.047 33.333 0.00 0.00 0.00 1.89
383 384 8.158789 AGTACCCTATTAAGTTGTTGCTTGTTA 58.841 33.333 0.00 0.00 0.00 2.41
384 385 7.002276 AGTACCCTATTAAGTTGTTGCTTGTT 58.998 34.615 0.00 0.00 0.00 2.83
385 386 6.540083 AGTACCCTATTAAGTTGTTGCTTGT 58.460 36.000 0.00 0.00 0.00 3.16
386 387 7.822822 AGTAGTACCCTATTAAGTTGTTGCTTG 59.177 37.037 0.00 0.00 0.00 4.01
387 388 7.914859 AGTAGTACCCTATTAAGTTGTTGCTT 58.085 34.615 0.00 0.00 0.00 3.91
388 389 7.399478 AGAGTAGTACCCTATTAAGTTGTTGCT 59.601 37.037 0.00 0.00 0.00 3.91
389 390 7.491696 CAGAGTAGTACCCTATTAAGTTGTTGC 59.508 40.741 0.00 0.00 0.00 4.17
390 391 7.980099 CCAGAGTAGTACCCTATTAAGTTGTTG 59.020 40.741 0.00 0.00 0.00 3.33
391 392 7.125356 CCCAGAGTAGTACCCTATTAAGTTGTT 59.875 40.741 0.00 0.00 0.00 2.83
392 393 6.610425 CCCAGAGTAGTACCCTATTAAGTTGT 59.390 42.308 0.00 0.00 0.00 3.32
393 394 6.462628 GCCCAGAGTAGTACCCTATTAAGTTG 60.463 46.154 0.00 0.00 0.00 3.16
394 395 5.601729 GCCCAGAGTAGTACCCTATTAAGTT 59.398 44.000 0.00 0.00 0.00 2.66
395 396 5.103172 AGCCCAGAGTAGTACCCTATTAAGT 60.103 44.000 0.00 0.00 0.00 2.24
396 397 5.244178 CAGCCCAGAGTAGTACCCTATTAAG 59.756 48.000 0.00 0.00 0.00 1.85
397 398 5.145564 CAGCCCAGAGTAGTACCCTATTAA 58.854 45.833 0.00 0.00 0.00 1.40
398 399 4.169461 ACAGCCCAGAGTAGTACCCTATTA 59.831 45.833 0.00 0.00 0.00 0.98
399 400 3.052033 ACAGCCCAGAGTAGTACCCTATT 60.052 47.826 0.00 0.00 0.00 1.73
400 401 2.518834 ACAGCCCAGAGTAGTACCCTAT 59.481 50.000 0.00 0.00 0.00 2.57
401 402 1.928077 ACAGCCCAGAGTAGTACCCTA 59.072 52.381 0.00 0.00 0.00 3.53
402 403 0.711184 ACAGCCCAGAGTAGTACCCT 59.289 55.000 0.00 0.00 0.00 4.34
403 404 1.207329 CAACAGCCCAGAGTAGTACCC 59.793 57.143 0.00 0.00 0.00 3.69
404 405 1.405661 GCAACAGCCCAGAGTAGTACC 60.406 57.143 0.00 0.00 0.00 3.34
405 406 1.275291 TGCAACAGCCCAGAGTAGTAC 59.725 52.381 0.00 0.00 0.00 2.73
406 407 1.275291 GTGCAACAGCCCAGAGTAGTA 59.725 52.381 0.00 0.00 36.32 1.82
407 408 0.035458 GTGCAACAGCCCAGAGTAGT 59.965 55.000 0.00 0.00 36.32 2.73
408 409 0.674895 GGTGCAACAGCCCAGAGTAG 60.675 60.000 0.00 0.00 39.98 2.57
409 410 1.374947 GGTGCAACAGCCCAGAGTA 59.625 57.895 0.00 0.00 39.98 2.59
410 411 2.113986 GGTGCAACAGCCCAGAGT 59.886 61.111 0.00 0.00 39.98 3.24
411 412 2.674380 GGGTGCAACAGCCCAGAG 60.674 66.667 3.06 0.00 45.22 3.35
417 418 0.250467 TCAAGAGAGGGTGCAACAGC 60.250 55.000 3.06 0.00 39.98 4.40
418 419 1.345741 TCTCAAGAGAGGGTGCAACAG 59.654 52.381 3.06 0.00 42.34 3.16
419 420 1.070758 GTCTCAAGAGAGGGTGCAACA 59.929 52.381 3.06 0.00 42.34 3.33
420 421 1.346068 AGTCTCAAGAGAGGGTGCAAC 59.654 52.381 0.00 0.00 42.34 4.17
421 422 1.620819 GAGTCTCAAGAGAGGGTGCAA 59.379 52.381 0.00 0.00 42.34 4.08
422 423 1.261480 GAGTCTCAAGAGAGGGTGCA 58.739 55.000 0.00 0.00 42.34 4.57
423 424 0.534873 GGAGTCTCAAGAGAGGGTGC 59.465 60.000 1.47 0.00 42.34 5.01
424 425 2.230130 AGGAGTCTCAAGAGAGGGTG 57.770 55.000 1.47 0.00 42.34 4.61
425 426 2.381961 AGAAGGAGTCTCAAGAGAGGGT 59.618 50.000 1.47 0.00 42.34 4.34
426 427 3.100207 AGAAGGAGTCTCAAGAGAGGG 57.900 52.381 1.47 0.00 42.34 4.30
427 428 6.129179 AGATAAGAAGGAGTCTCAAGAGAGG 58.871 44.000 1.47 0.00 42.34 3.69
428 429 7.645058 AAGATAAGAAGGAGTCTCAAGAGAG 57.355 40.000 1.47 0.00 43.48 3.20
429 430 9.707957 ATAAAGATAAGAAGGAGTCTCAAGAGA 57.292 33.333 1.47 0.00 34.56 3.10
430 431 9.965824 GATAAAGATAAGAAGGAGTCTCAAGAG 57.034 37.037 1.47 0.00 34.56 2.85
431 432 8.919145 GGATAAAGATAAGAAGGAGTCTCAAGA 58.081 37.037 1.47 0.00 34.56 3.02
432 433 7.865385 CGGATAAAGATAAGAAGGAGTCTCAAG 59.135 40.741 1.47 0.00 34.56 3.02
433 434 7.560262 TCGGATAAAGATAAGAAGGAGTCTCAA 59.440 37.037 1.47 0.00 34.56 3.02
434 435 7.013464 GTCGGATAAAGATAAGAAGGAGTCTCA 59.987 40.741 1.47 0.00 34.56 3.27
435 436 7.364970 GTCGGATAAAGATAAGAAGGAGTCTC 58.635 42.308 0.00 0.00 34.56 3.36
436 437 6.265876 GGTCGGATAAAGATAAGAAGGAGTCT 59.734 42.308 0.00 0.00 38.69 3.24
437 438 6.040616 TGGTCGGATAAAGATAAGAAGGAGTC 59.959 42.308 0.00 0.00 0.00 3.36
438 439 5.897824 TGGTCGGATAAAGATAAGAAGGAGT 59.102 40.000 0.00 0.00 0.00 3.85
439 440 6.406692 TGGTCGGATAAAGATAAGAAGGAG 57.593 41.667 0.00 0.00 0.00 3.69
440 441 6.782988 AGATGGTCGGATAAAGATAAGAAGGA 59.217 38.462 0.00 0.00 0.00 3.36
441 442 6.998802 AGATGGTCGGATAAAGATAAGAAGG 58.001 40.000 0.00 0.00 0.00 3.46
442 443 7.039363 AGGAGATGGTCGGATAAAGATAAGAAG 60.039 40.741 0.00 0.00 0.00 2.85
443 444 6.782988 AGGAGATGGTCGGATAAAGATAAGAA 59.217 38.462 0.00 0.00 0.00 2.52
444 445 6.315714 AGGAGATGGTCGGATAAAGATAAGA 58.684 40.000 0.00 0.00 0.00 2.10
445 446 6.597832 AGGAGATGGTCGGATAAAGATAAG 57.402 41.667 0.00 0.00 0.00 1.73
446 447 7.008332 TGTAGGAGATGGTCGGATAAAGATAA 58.992 38.462 0.00 0.00 0.00 1.75
447 448 6.433404 GTGTAGGAGATGGTCGGATAAAGATA 59.567 42.308 0.00 0.00 0.00 1.98
448 449 5.244178 GTGTAGGAGATGGTCGGATAAAGAT 59.756 44.000 0.00 0.00 0.00 2.40
449 450 4.583489 GTGTAGGAGATGGTCGGATAAAGA 59.417 45.833 0.00 0.00 0.00 2.52
450 451 4.341235 TGTGTAGGAGATGGTCGGATAAAG 59.659 45.833 0.00 0.00 0.00 1.85
451 452 4.098960 GTGTGTAGGAGATGGTCGGATAAA 59.901 45.833 0.00 0.00 0.00 1.40
452 453 3.635373 GTGTGTAGGAGATGGTCGGATAA 59.365 47.826 0.00 0.00 0.00 1.75
453 454 3.220110 GTGTGTAGGAGATGGTCGGATA 58.780 50.000 0.00 0.00 0.00 2.59
454 455 2.032620 GTGTGTAGGAGATGGTCGGAT 58.967 52.381 0.00 0.00 0.00 4.18
455 456 1.471119 GTGTGTAGGAGATGGTCGGA 58.529 55.000 0.00 0.00 0.00 4.55
456 457 0.100682 CGTGTGTAGGAGATGGTCGG 59.899 60.000 0.00 0.00 0.00 4.79
457 458 0.525668 GCGTGTGTAGGAGATGGTCG 60.526 60.000 0.00 0.00 0.00 4.79
458 459 0.179108 GGCGTGTGTAGGAGATGGTC 60.179 60.000 0.00 0.00 0.00 4.02
459 460 0.902984 TGGCGTGTGTAGGAGATGGT 60.903 55.000 0.00 0.00 0.00 3.55
460 461 0.460284 GTGGCGTGTGTAGGAGATGG 60.460 60.000 0.00 0.00 0.00 3.51
461 462 0.246360 TGTGGCGTGTGTAGGAGATG 59.754 55.000 0.00 0.00 0.00 2.90
462 463 1.137086 GATGTGGCGTGTGTAGGAGAT 59.863 52.381 0.00 0.00 0.00 2.75
463 464 0.530744 GATGTGGCGTGTGTAGGAGA 59.469 55.000 0.00 0.00 0.00 3.71
464 465 0.460284 GGATGTGGCGTGTGTAGGAG 60.460 60.000 0.00 0.00 0.00 3.69
465 466 1.594833 GGATGTGGCGTGTGTAGGA 59.405 57.895 0.00 0.00 0.00 2.94
466 467 1.449601 GGGATGTGGCGTGTGTAGG 60.450 63.158 0.00 0.00 0.00 3.18
467 468 0.321210 TTGGGATGTGGCGTGTGTAG 60.321 55.000 0.00 0.00 0.00 2.74
468 469 0.108774 TTTGGGATGTGGCGTGTGTA 59.891 50.000 0.00 0.00 0.00 2.90
469 470 1.152860 TTTGGGATGTGGCGTGTGT 60.153 52.632 0.00 0.00 0.00 3.72
470 471 1.172180 ACTTTGGGATGTGGCGTGTG 61.172 55.000 0.00 0.00 0.00 3.82
471 472 0.889186 GACTTTGGGATGTGGCGTGT 60.889 55.000 0.00 0.00 0.00 4.49
472 473 0.606401 AGACTTTGGGATGTGGCGTG 60.606 55.000 0.00 0.00 0.00 5.34
473 474 0.110486 AAGACTTTGGGATGTGGCGT 59.890 50.000 0.00 0.00 0.00 5.68
474 475 0.523072 CAAGACTTTGGGATGTGGCG 59.477 55.000 0.00 0.00 0.00 5.69
475 476 1.620822 ACAAGACTTTGGGATGTGGC 58.379 50.000 0.00 0.00 38.66 5.01
476 477 6.460123 GCATATAACAAGACTTTGGGATGTGG 60.460 42.308 0.00 0.00 38.66 4.17
477 478 6.460123 GGCATATAACAAGACTTTGGGATGTG 60.460 42.308 0.00 0.00 38.66 3.21
478 479 5.594317 GGCATATAACAAGACTTTGGGATGT 59.406 40.000 0.00 0.00 38.66 3.06
479 480 5.829924 AGGCATATAACAAGACTTTGGGATG 59.170 40.000 0.00 0.00 38.66 3.51
480 481 6.018433 AGGCATATAACAAGACTTTGGGAT 57.982 37.500 0.00 0.00 38.66 3.85
481 482 5.450818 AGGCATATAACAAGACTTTGGGA 57.549 39.130 0.00 0.00 38.66 4.37
482 483 6.530019 AAAGGCATATAACAAGACTTTGGG 57.470 37.500 0.00 0.00 38.66 4.12
483 484 7.830739 AGAAAAGGCATATAACAAGACTTTGG 58.169 34.615 0.00 0.00 38.66 3.28
484 485 9.132521 CAAGAAAAGGCATATAACAAGACTTTG 57.867 33.333 0.00 0.00 40.24 2.77
485 486 7.814587 GCAAGAAAAGGCATATAACAAGACTTT 59.185 33.333 0.00 0.00 0.00 2.66
486 487 7.315890 GCAAGAAAAGGCATATAACAAGACTT 58.684 34.615 0.00 0.00 0.00 3.01
487 488 6.127619 GGCAAGAAAAGGCATATAACAAGACT 60.128 38.462 0.00 0.00 0.00 3.24
488 489 6.036470 GGCAAGAAAAGGCATATAACAAGAC 58.964 40.000 0.00 0.00 0.00 3.01
489 490 5.714333 TGGCAAGAAAAGGCATATAACAAGA 59.286 36.000 0.00 0.00 36.56 3.02
490 491 5.964758 TGGCAAGAAAAGGCATATAACAAG 58.035 37.500 0.00 0.00 36.56 3.16
491 492 5.991933 TGGCAAGAAAAGGCATATAACAA 57.008 34.783 0.00 0.00 36.56 2.83
492 493 5.105392 CCTTGGCAAGAAAAGGCATATAACA 60.105 40.000 28.18 0.00 41.43 2.41
493 494 5.105351 ACCTTGGCAAGAAAAGGCATATAAC 60.105 40.000 28.18 0.00 45.82 1.89
494 495 5.022787 ACCTTGGCAAGAAAAGGCATATAA 58.977 37.500 28.18 0.00 45.82 0.98
495 496 4.609301 ACCTTGGCAAGAAAAGGCATATA 58.391 39.130 28.18 0.00 45.82 0.86
496 497 3.444029 ACCTTGGCAAGAAAAGGCATAT 58.556 40.909 28.18 0.00 45.82 1.78
497 498 2.888212 ACCTTGGCAAGAAAAGGCATA 58.112 42.857 28.18 0.00 45.82 3.14
498 499 1.720781 ACCTTGGCAAGAAAAGGCAT 58.279 45.000 28.18 0.00 45.82 4.40
499 500 1.138661 CAACCTTGGCAAGAAAAGGCA 59.861 47.619 28.18 0.00 45.82 4.75
500 501 1.412343 TCAACCTTGGCAAGAAAAGGC 59.588 47.619 28.18 0.00 45.82 4.35
502 503 4.947645 TCATTCAACCTTGGCAAGAAAAG 58.052 39.130 28.18 13.69 0.00 2.27
503 504 5.549742 ATCATTCAACCTTGGCAAGAAAA 57.450 34.783 28.18 15.48 0.00 2.29
504 505 6.041409 TGTTATCATTCAACCTTGGCAAGAAA 59.959 34.615 28.18 15.80 0.00 2.52
505 506 5.538053 TGTTATCATTCAACCTTGGCAAGAA 59.462 36.000 28.18 14.79 0.00 2.52
506 507 5.076182 TGTTATCATTCAACCTTGGCAAGA 58.924 37.500 28.18 8.46 0.00 3.02
507 508 5.389859 TGTTATCATTCAACCTTGGCAAG 57.610 39.130 20.31 20.31 0.00 4.01
508 509 5.479724 TCATGTTATCATTCAACCTTGGCAA 59.520 36.000 0.00 0.00 31.15 4.52
509 510 5.015515 TCATGTTATCATTCAACCTTGGCA 58.984 37.500 0.00 0.00 31.15 4.92
510 511 5.581126 TCATGTTATCATTCAACCTTGGC 57.419 39.130 0.00 0.00 31.15 4.52
511 512 5.585390 GCTCATGTTATCATTCAACCTTGG 58.415 41.667 0.00 0.00 31.15 3.61
554 555 1.008538 CTTTCCTTGTGCGGCACAC 60.009 57.895 33.44 9.57 44.47 3.82
557 558 2.518112 TGCTTTCCTTGTGCGGCA 60.518 55.556 0.00 0.00 0.00 5.69
566 567 1.366319 ATCCACTCTGGTGCTTTCCT 58.634 50.000 0.00 0.00 41.75 3.36
589 590 9.838339 AGATCTTTGTTAAGAAAAGAGAGTGAA 57.162 29.630 15.07 0.00 44.52 3.18
605 606 9.807921 TTCCAATAAAGGTAGAAGATCTTTGTT 57.192 29.630 9.87 1.58 34.00 2.83
642 643 8.738645 ATTCCTCTCTGGTTAAATGATGTAAC 57.261 34.615 0.00 0.00 37.07 2.50
686 691 2.168728 CACTTGAGCTTACTCCTACCCC 59.831 54.545 0.00 0.00 42.74 4.95
747 753 2.440247 GGCTGGGCCGTAAATGCT 60.440 61.111 0.00 0.00 39.62 3.79
781 787 0.814410 TTAAAGCGCGTGAACCACCA 60.814 50.000 8.43 0.00 0.00 4.17
782 788 0.385098 GTTAAAGCGCGTGAACCACC 60.385 55.000 12.11 0.00 0.00 4.61
783 789 0.584876 AGTTAAAGCGCGTGAACCAC 59.415 50.000 18.53 3.32 0.00 4.16
855 870 1.202806 TGGGAGCATTATAGTGCCAGC 60.203 52.381 15.87 6.68 46.19 4.85
999 1015 0.460311 CGCCGGAGTAGGAGTTCATT 59.540 55.000 5.05 0.00 0.00 2.57
1040 1056 0.966920 GGAGTCGAAGGAGGTTGTGA 59.033 55.000 0.00 0.00 0.00 3.58
1318 1334 0.476771 GGGTTGTTGGACTGAGGGAA 59.523 55.000 0.00 0.00 0.00 3.97
1401 1417 2.588314 GCCGCTGCTGATCTGAGG 60.588 66.667 3.42 2.24 36.82 3.86
1434 1450 2.102588 GGTCCTAGGATTAGCGCTTGAA 59.897 50.000 18.68 4.76 0.00 2.69
1446 1462 2.180276 GAAGAGCTGTTGGTCCTAGGA 58.820 52.381 7.62 7.62 41.26 2.94
1488 1504 2.258726 GGTTTTCGGGAGCGTGCTT 61.259 57.895 0.00 0.00 0.00 3.91
1691 1707 0.394216 CACGCCAAATCCCTGATCCA 60.394 55.000 0.00 0.00 0.00 3.41
1944 1960 1.877637 TCTCACCAAACATGTCACCG 58.122 50.000 0.00 0.00 0.00 4.94
2253 2269 5.872617 CCATTGTAATACCTTCGAACAGTCA 59.127 40.000 0.00 0.00 0.00 3.41
2290 2306 9.900112 ATAACTAAAAGTGGGGAGATCTACTAT 57.100 33.333 4.57 0.00 0.00 2.12
2341 2357 4.937620 GTCACATTGTCCTTATCTTGCTCA 59.062 41.667 0.00 0.00 0.00 4.26
2542 2558 6.600822 AGTTTCCATGTCAAGGATGATTACAG 59.399 38.462 0.00 0.00 38.01 2.74
2560 2576 8.474025 ACAATTTGAAATAACTCACAGTTTCCA 58.526 29.630 2.79 0.00 39.51 3.53
2588 2604 4.451900 CCCCAAAGCCACAAGTATAGTAG 58.548 47.826 0.00 0.00 0.00 2.57
2738 2762 6.299023 TCATGATGTTACAAACACAGTGAC 57.701 37.500 7.81 0.00 45.50 3.67
3008 3035 1.401018 GCAACATTACAACTGTCGGGC 60.401 52.381 0.00 0.00 0.00 6.13
3011 3038 6.417635 AGAAATTTGCAACATTACAACTGTCG 59.582 34.615 0.00 0.00 0.00 4.35
3013 3040 9.030301 GTTAGAAATTTGCAACATTACAACTGT 57.970 29.630 0.00 0.00 0.00 3.55
3040 3067 5.235516 GTTATACTGCACAACCACACTAGT 58.764 41.667 0.00 0.00 0.00 2.57
3112 3139 3.667360 GGGCAATTTGCACTTCTCAAAT 58.333 40.909 22.05 0.00 45.01 2.32
3210 3238 7.495934 ACACCTGACAATATTTGCTATAGACAC 59.504 37.037 3.21 0.00 0.00 3.67
3265 3293 4.035278 ACACGGTAAACAACAACAATGG 57.965 40.909 0.00 0.00 0.00 3.16
3386 3415 6.409234 CCATCCTAATAACTCTTAGGCAACCA 60.409 42.308 5.22 0.00 45.01 3.67
3388 3417 6.827727 TCCATCCTAATAACTCTTAGGCAAC 58.172 40.000 5.22 0.00 45.01 4.17
3390 3419 5.544176 CCTCCATCCTAATAACTCTTAGGCA 59.456 44.000 5.22 0.00 45.01 4.75
3391 3420 5.569832 GCCTCCATCCTAATAACTCTTAGGC 60.570 48.000 5.22 0.00 45.01 3.93
3394 3423 5.012148 GCAGCCTCCATCCTAATAACTCTTA 59.988 44.000 0.00 0.00 0.00 2.10
3396 3425 3.326297 GCAGCCTCCATCCTAATAACTCT 59.674 47.826 0.00 0.00 0.00 3.24
3397 3426 3.558109 GGCAGCCTCCATCCTAATAACTC 60.558 52.174 3.29 0.00 0.00 3.01
3398 3427 2.373502 GGCAGCCTCCATCCTAATAACT 59.626 50.000 3.29 0.00 0.00 2.24
3399 3428 2.106511 TGGCAGCCTCCATCCTAATAAC 59.893 50.000 14.15 0.00 0.00 1.89
3402 3431 0.475906 GTGGCAGCCTCCATCCTAAT 59.524 55.000 14.15 0.00 38.57 1.73
3411 3440 0.036875 AGTAAACCTGTGGCAGCCTC 59.963 55.000 14.15 10.17 0.00 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.