Multiple sequence alignment - TraesCS4A01G135000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G135000 chr4A 100.000 3790 0 0 1 3790 185177398 185181187 0.000000e+00 6999.0
1 TraesCS4A01G135000 chr4B 93.999 1783 62 14 926 2677 372253438 372251670 0.000000e+00 2658.0
2 TraesCS4A01G135000 chr4B 95.697 674 27 2 2696 3368 372251615 372250943 0.000000e+00 1083.0
3 TraesCS4A01G135000 chr4B 96.154 364 14 0 478 841 372253800 372253437 2.520000e-166 595.0
4 TraesCS4A01G135000 chr4B 93.277 238 5 2 248 484 372264488 372264261 1.300000e-89 340.0
5 TraesCS4A01G135000 chr4B 82.171 129 18 5 3229 3357 568628544 568628421 5.180000e-19 106.0
6 TraesCS4A01G135000 chr4B 93.333 45 1 1 839 881 364034854 364034898 8.790000e-07 65.8
7 TraesCS4A01G135000 chr4D 91.957 920 23 18 1781 2677 299448575 299447684 0.000000e+00 1242.0
8 TraesCS4A01G135000 chr4D 94.763 802 32 7 2696 3492 299447629 299446833 0.000000e+00 1240.0
9 TraesCS4A01G135000 chr4D 95.113 798 16 6 926 1721 299449341 299448565 0.000000e+00 1236.0
10 TraesCS4A01G135000 chr4D 97.487 597 12 2 248 841 299449936 299449340 0.000000e+00 1016.0
11 TraesCS4A01G135000 chr4D 94.558 294 13 3 3500 3790 107685335 107685628 5.770000e-123 451.0
12 TraesCS4A01G135000 chr4D 92.627 217 9 6 36 248 299450199 299449986 4.760000e-79 305.0
13 TraesCS4A01G135000 chr7D 94.539 293 14 2 3500 3790 170871303 170871011 5.770000e-123 451.0
14 TraesCS4A01G135000 chr7D 93.857 293 16 2 3500 3790 428530354 428530646 1.250000e-119 440.0
15 TraesCS4A01G135000 chr6D 94.000 300 15 3 3493 3790 249433171 249432873 5.770000e-123 451.0
16 TraesCS4A01G135000 chr6D 93.857 293 16 2 3500 3790 437292539 437292247 1.250000e-119 440.0
17 TraesCS4A01G135000 chr3D 94.539 293 14 2 3499 3790 590520223 590519932 5.770000e-123 451.0
18 TraesCS4A01G135000 chr3D 93.878 294 15 3 3500 3790 411559353 411559646 1.250000e-119 440.0
19 TraesCS4A01G135000 chr5D 93.857 293 16 2 3500 3790 521863166 521862874 1.250000e-119 440.0
20 TraesCS4A01G135000 chr5D 81.250 224 34 4 3223 3440 544239658 544239437 1.400000e-39 174.0
21 TraesCS4A01G135000 chr1D 93.581 296 17 2 3497 3790 431953341 431953636 1.250000e-119 440.0
22 TraesCS4A01G135000 chr1B 81.776 214 36 3 3229 3440 398382719 398382931 3.890000e-40 176.0
23 TraesCS4A01G135000 chr1B 100.000 28 0 0 2714 2741 652927280 652927253 7.000000e-03 52.8
24 TraesCS4A01G135000 chrUn 79.739 153 23 8 3228 3378 374044422 374044568 1.860000e-18 104.0
25 TraesCS4A01G135000 chr2D 79.739 153 23 8 3228 3378 4324211 4324065 1.860000e-18 104.0
26 TraesCS4A01G135000 chr2D 79.739 153 23 8 3228 3378 4349410 4349264 1.860000e-18 104.0
27 TraesCS4A01G135000 chr2D 79.739 153 23 8 3228 3378 4380935 4380789 1.860000e-18 104.0
28 TraesCS4A01G135000 chr7B 97.674 43 1 0 839 881 572642555 572642513 1.460000e-09 75.0
29 TraesCS4A01G135000 chr5B 95.455 44 1 1 839 881 330859468 330859425 6.790000e-08 69.4
30 TraesCS4A01G135000 chr5A 95.455 44 1 1 839 881 704553445 704553488 6.790000e-08 69.4
31 TraesCS4A01G135000 chr6B 93.333 45 1 1 839 881 16339299 16339343 8.790000e-07 65.8
32 TraesCS4A01G135000 chr6B 95.238 42 1 1 841 881 82527015 82527056 8.790000e-07 65.8
33 TraesCS4A01G135000 chr6B 93.333 45 1 1 839 881 82527183 82527139 8.790000e-07 65.8
34 TraesCS4A01G135000 chr6A 93.333 45 1 1 839 881 101545862 101545818 8.790000e-07 65.8
35 TraesCS4A01G135000 chr3B 93.333 45 1 1 839 881 767738962 767738918 8.790000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G135000 chr4A 185177398 185181187 3789 False 6999.000000 6999 100.000000 1 3790 1 chr4A.!!$F1 3789
1 TraesCS4A01G135000 chr4B 372250943 372253800 2857 True 1445.333333 2658 95.283333 478 3368 3 chr4B.!!$R3 2890
2 TraesCS4A01G135000 chr4D 299446833 299450199 3366 True 1007.800000 1242 94.389400 36 3492 5 chr4D.!!$R1 3456

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
864 922 0.034337 TAACCTCCAGTTCGTGTGCC 59.966 55.0 0.0 0.00 40.05 5.01 F
901 959 0.108585 ACCCCACATGTCAGTGACAC 59.891 55.0 27.7 1.06 45.65 3.67 F
2057 2124 0.168128 CCGACGTTTCCTCATTTGGC 59.832 55.0 0.0 0.00 0.00 4.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2677 2775 0.328258 ATCTTGGGTAAACTGGCGCT 59.672 50.0 7.64 0.0 0.00 5.92 R
2679 2777 1.821216 ACATCTTGGGTAAACTGGCG 58.179 50.0 0.00 0.0 0.00 5.69 R
3737 3876 0.036388 GGAGGTGAAGGCGTCATCAA 60.036 55.0 15.95 0.0 40.16 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.961360 TGAGGAGTCTATGAACGATATTGT 57.039 37.500 0.00 0.00 0.00 2.71
25 26 7.872881 TGAGGAGTCTATGAACGATATTGTAC 58.127 38.462 0.00 0.00 0.00 2.90
26 27 7.040617 TGAGGAGTCTATGAACGATATTGTACC 60.041 40.741 0.00 0.00 0.00 3.34
27 28 7.005296 AGGAGTCTATGAACGATATTGTACCT 58.995 38.462 0.00 0.00 0.00 3.08
28 29 7.175293 AGGAGTCTATGAACGATATTGTACCTC 59.825 40.741 0.00 0.00 0.00 3.85
29 30 7.175293 GGAGTCTATGAACGATATTGTACCTCT 59.825 40.741 0.00 0.00 0.00 3.69
30 31 8.466617 AGTCTATGAACGATATTGTACCTCTT 57.533 34.615 0.00 0.00 0.00 2.85
31 32 8.569641 AGTCTATGAACGATATTGTACCTCTTC 58.430 37.037 0.00 0.00 0.00 2.87
32 33 8.569641 GTCTATGAACGATATTGTACCTCTTCT 58.430 37.037 0.00 0.00 0.00 2.85
33 34 9.132923 TCTATGAACGATATTGTACCTCTTCTT 57.867 33.333 0.00 0.00 0.00 2.52
34 35 9.400638 CTATGAACGATATTGTACCTCTTCTTC 57.599 37.037 0.00 0.00 0.00 2.87
52 53 5.633830 TCTTCTAGACGATGTAACCGTTT 57.366 39.130 0.00 0.00 40.67 3.60
129 133 2.590007 CAGGACCGCATGCTAGGC 60.590 66.667 17.13 9.13 0.00 3.93
130 134 3.866582 AGGACCGCATGCTAGGCC 61.867 66.667 19.28 19.28 0.00 5.19
214 219 5.030147 TGGAGTTAGACCAGGAATACACAT 58.970 41.667 0.00 0.00 33.22 3.21
239 244 2.107950 TAGGCCAAATCACACGGAAG 57.892 50.000 5.01 0.00 0.00 3.46
252 257 2.851263 ACGGAAGTACTGAATTGGCA 57.149 45.000 0.00 0.00 46.88 4.92
253 258 3.134574 ACGGAAGTACTGAATTGGCAA 57.865 42.857 0.68 0.68 46.88 4.52
474 529 0.592637 TGCCAAGAACAGCGATGTTG 59.407 50.000 25.65 10.58 31.35 3.33
679 734 1.003233 AGGAAGGAAGTTGCCGAGC 60.003 57.895 0.00 0.00 0.00 5.03
698 753 1.436195 CCATTGCCGGTGTCCATACG 61.436 60.000 1.90 0.00 0.00 3.06
758 816 3.669122 GGCGATGACGACTTGTATATGTC 59.331 47.826 0.00 0.00 45.04 3.06
838 896 2.995574 CGTCGGGACCCACTTCCT 60.996 66.667 12.15 0.00 35.76 3.36
839 897 2.580601 CGTCGGGACCCACTTCCTT 61.581 63.158 12.15 0.00 35.76 3.36
840 898 1.003718 GTCGGGACCCACTTCCTTG 60.004 63.158 12.15 0.00 35.76 3.61
841 899 1.152204 TCGGGACCCACTTCCTTGA 60.152 57.895 12.15 0.00 35.76 3.02
842 900 0.546747 TCGGGACCCACTTCCTTGAT 60.547 55.000 12.15 0.00 35.76 2.57
843 901 0.392998 CGGGACCCACTTCCTTGATG 60.393 60.000 12.15 0.00 35.76 3.07
844 902 0.991920 GGGACCCACTTCCTTGATGA 59.008 55.000 5.33 0.00 35.76 2.92
845 903 1.566231 GGGACCCACTTCCTTGATGAT 59.434 52.381 5.33 0.00 35.76 2.45
846 904 2.777692 GGGACCCACTTCCTTGATGATA 59.222 50.000 5.33 0.00 35.76 2.15
847 905 3.202151 GGGACCCACTTCCTTGATGATAA 59.798 47.826 5.33 0.00 35.76 1.75
848 906 4.200092 GGACCCACTTCCTTGATGATAAC 58.800 47.826 0.00 0.00 32.24 1.89
849 907 4.200092 GACCCACTTCCTTGATGATAACC 58.800 47.826 0.00 0.00 0.00 2.85
850 908 3.852578 ACCCACTTCCTTGATGATAACCT 59.147 43.478 0.00 0.00 0.00 3.50
851 909 4.080299 ACCCACTTCCTTGATGATAACCTC 60.080 45.833 0.00 0.00 0.00 3.85
852 910 4.455606 CCACTTCCTTGATGATAACCTCC 58.544 47.826 0.00 0.00 0.00 4.30
853 911 4.080356 CCACTTCCTTGATGATAACCTCCA 60.080 45.833 0.00 0.00 0.00 3.86
854 912 5.121811 CACTTCCTTGATGATAACCTCCAG 58.878 45.833 0.00 0.00 0.00 3.86
855 913 4.785376 ACTTCCTTGATGATAACCTCCAGT 59.215 41.667 0.00 0.00 0.00 4.00
856 914 5.251700 ACTTCCTTGATGATAACCTCCAGTT 59.748 40.000 0.00 0.00 42.83 3.16
857 915 5.359194 TCCTTGATGATAACCTCCAGTTC 57.641 43.478 0.00 0.00 40.05 3.01
858 916 4.122776 CCTTGATGATAACCTCCAGTTCG 58.877 47.826 0.00 0.00 40.05 3.95
859 917 4.383118 CCTTGATGATAACCTCCAGTTCGT 60.383 45.833 0.00 0.00 40.05 3.85
860 918 4.123497 TGATGATAACCTCCAGTTCGTG 57.877 45.455 0.00 0.00 40.05 4.35
861 919 3.513912 TGATGATAACCTCCAGTTCGTGT 59.486 43.478 0.00 0.00 40.05 4.49
862 920 3.313012 TGATAACCTCCAGTTCGTGTG 57.687 47.619 0.00 0.00 40.05 3.82
863 921 2.000447 GATAACCTCCAGTTCGTGTGC 59.000 52.381 0.00 0.00 40.05 4.57
864 922 0.034337 TAACCTCCAGTTCGTGTGCC 59.966 55.000 0.00 0.00 40.05 5.01
865 923 1.696097 AACCTCCAGTTCGTGTGCCT 61.696 55.000 0.00 0.00 30.99 4.75
866 924 1.071471 CCTCCAGTTCGTGTGCCTT 59.929 57.895 0.00 0.00 0.00 4.35
867 925 0.535102 CCTCCAGTTCGTGTGCCTTT 60.535 55.000 0.00 0.00 0.00 3.11
868 926 0.588252 CTCCAGTTCGTGTGCCTTTG 59.412 55.000 0.00 0.00 0.00 2.77
869 927 0.179234 TCCAGTTCGTGTGCCTTTGA 59.821 50.000 0.00 0.00 0.00 2.69
870 928 1.202758 TCCAGTTCGTGTGCCTTTGAT 60.203 47.619 0.00 0.00 0.00 2.57
871 929 1.197721 CCAGTTCGTGTGCCTTTGATC 59.802 52.381 0.00 0.00 0.00 2.92
872 930 1.872952 CAGTTCGTGTGCCTTTGATCA 59.127 47.619 0.00 0.00 0.00 2.92
873 931 2.485426 CAGTTCGTGTGCCTTTGATCAT 59.515 45.455 0.00 0.00 0.00 2.45
874 932 3.684305 CAGTTCGTGTGCCTTTGATCATA 59.316 43.478 0.00 0.00 0.00 2.15
875 933 4.154015 CAGTTCGTGTGCCTTTGATCATAA 59.846 41.667 0.00 0.00 0.00 1.90
876 934 4.393062 AGTTCGTGTGCCTTTGATCATAAG 59.607 41.667 0.00 3.60 0.00 1.73
877 935 2.677836 TCGTGTGCCTTTGATCATAAGC 59.322 45.455 0.00 0.00 0.00 3.09
878 936 2.223340 CGTGTGCCTTTGATCATAAGCC 60.223 50.000 0.00 0.00 0.00 4.35
879 937 2.099756 GTGTGCCTTTGATCATAAGCCC 59.900 50.000 0.00 0.00 0.00 5.19
880 938 1.683385 GTGCCTTTGATCATAAGCCCC 59.317 52.381 0.00 0.00 0.00 5.80
881 939 0.954452 GCCTTTGATCATAAGCCCCG 59.046 55.000 0.00 0.00 0.00 5.73
882 940 1.476833 GCCTTTGATCATAAGCCCCGA 60.477 52.381 0.00 0.00 0.00 5.14
883 941 2.222027 CCTTTGATCATAAGCCCCGAC 58.778 52.381 0.00 0.00 0.00 4.79
884 942 2.222027 CTTTGATCATAAGCCCCGACC 58.778 52.381 0.00 0.00 0.00 4.79
885 943 0.472471 TTGATCATAAGCCCCGACCC 59.528 55.000 0.00 0.00 0.00 4.46
886 944 1.375326 GATCATAAGCCCCGACCCC 59.625 63.158 0.00 0.00 0.00 4.95
887 945 1.385347 ATCATAAGCCCCGACCCCA 60.385 57.895 0.00 0.00 0.00 4.96
888 946 1.705997 ATCATAAGCCCCGACCCCAC 61.706 60.000 0.00 0.00 0.00 4.61
889 947 2.285818 ATAAGCCCCGACCCCACA 60.286 61.111 0.00 0.00 0.00 4.17
890 948 1.696314 ATAAGCCCCGACCCCACAT 60.696 57.895 0.00 0.00 0.00 3.21
891 949 1.994885 ATAAGCCCCGACCCCACATG 61.995 60.000 0.00 0.00 0.00 3.21
893 951 4.796495 GCCCCGACCCCACATGTC 62.796 72.222 0.00 0.00 0.00 3.06
894 952 3.326578 CCCCGACCCCACATGTCA 61.327 66.667 0.00 0.00 32.91 3.58
895 953 2.268920 CCCGACCCCACATGTCAG 59.731 66.667 0.00 0.00 32.91 3.51
896 954 2.592993 CCCGACCCCACATGTCAGT 61.593 63.158 0.00 0.00 32.91 3.41
897 955 1.375908 CCGACCCCACATGTCAGTG 60.376 63.158 0.00 0.00 39.21 3.66
898 956 1.671166 CGACCCCACATGTCAGTGA 59.329 57.895 0.00 0.00 42.05 3.41
899 957 0.670546 CGACCCCACATGTCAGTGAC 60.671 60.000 16.68 16.68 42.05 3.67
900 958 0.396435 GACCCCACATGTCAGTGACA 59.604 55.000 27.35 27.35 46.90 3.58
901 959 0.108585 ACCCCACATGTCAGTGACAC 59.891 55.000 27.70 1.06 45.65 3.67
902 960 0.397941 CCCCACATGTCAGTGACACT 59.602 55.000 27.70 13.30 45.65 3.55
903 961 1.516161 CCCACATGTCAGTGACACTG 58.484 55.000 27.70 26.64 45.65 3.66
904 962 1.516161 CCACATGTCAGTGACACTGG 58.484 55.000 30.39 26.92 45.65 4.00
905 963 1.516161 CACATGTCAGTGACACTGGG 58.484 55.000 30.39 21.69 45.65 4.45
906 964 0.397941 ACATGTCAGTGACACTGGGG 59.602 55.000 30.39 20.24 45.65 4.96
907 965 0.321919 CATGTCAGTGACACTGGGGG 60.322 60.000 30.39 16.39 45.65 5.40
908 966 0.768221 ATGTCAGTGACACTGGGGGT 60.768 55.000 30.39 14.58 45.65 4.95
909 967 0.986019 TGTCAGTGACACTGGGGGTT 60.986 55.000 30.39 0.00 45.94 4.11
910 968 1.053424 GTCAGTGACACTGGGGGTTA 58.947 55.000 30.39 11.43 45.94 2.85
911 969 1.628846 GTCAGTGACACTGGGGGTTAT 59.371 52.381 30.39 0.00 45.94 1.89
912 970 1.906574 TCAGTGACACTGGGGGTTATC 59.093 52.381 30.39 0.00 45.94 1.75
913 971 1.628340 CAGTGACACTGGGGGTTATCA 59.372 52.381 25.22 0.00 42.35 2.15
914 972 2.239654 CAGTGACACTGGGGGTTATCAT 59.760 50.000 25.22 0.00 42.35 2.45
915 973 2.505819 AGTGACACTGGGGGTTATCATC 59.494 50.000 7.47 0.00 0.00 2.92
916 974 2.238646 GTGACACTGGGGGTTATCATCA 59.761 50.000 0.00 0.00 0.00 3.07
917 975 2.916269 TGACACTGGGGGTTATCATCAA 59.084 45.455 0.00 0.00 0.00 2.57
918 976 3.527253 TGACACTGGGGGTTATCATCAAT 59.473 43.478 0.00 0.00 0.00 2.57
919 977 4.017591 TGACACTGGGGGTTATCATCAATT 60.018 41.667 0.00 0.00 0.00 2.32
920 978 5.192722 TGACACTGGGGGTTATCATCAATTA 59.807 40.000 0.00 0.00 0.00 1.40
921 979 6.126215 TGACACTGGGGGTTATCATCAATTAT 60.126 38.462 0.00 0.00 0.00 1.28
922 980 6.682537 ACACTGGGGGTTATCATCAATTATT 58.317 36.000 0.00 0.00 0.00 1.40
923 981 6.777580 ACACTGGGGGTTATCATCAATTATTC 59.222 38.462 0.00 0.00 0.00 1.75
924 982 6.209391 CACTGGGGGTTATCATCAATTATTCC 59.791 42.308 0.00 0.00 0.00 3.01
960 1018 2.360852 TCCTCCGTCCGTCCTCAC 60.361 66.667 0.00 0.00 0.00 3.51
983 1041 7.500892 TCACTGCTTTCAACATTTTCCTTACTA 59.499 33.333 0.00 0.00 0.00 1.82
1464 1522 6.620949 GCAGAAGGTTAAAAATCGAACTCTCC 60.621 42.308 0.00 0.00 0.00 3.71
1571 1629 8.124823 TGATCGATGCTCATTTTGATTAGTTTC 58.875 33.333 0.54 0.00 0.00 2.78
1579 1637 8.246180 GCTCATTTTGATTAGTTTCCTCATCAA 58.754 33.333 0.00 0.00 38.77 2.57
1580 1638 9.565213 CTCATTTTGATTAGTTTCCTCATCAAC 57.435 33.333 0.16 0.00 39.72 3.18
1581 1639 9.300681 TCATTTTGATTAGTTTCCTCATCAACT 57.699 29.630 0.16 0.00 39.72 3.16
1582 1640 9.918630 CATTTTGATTAGTTTCCTCATCAACTT 57.081 29.630 0.16 0.00 39.72 2.66
1584 1642 9.748708 TTTTGATTAGTTTCCTCATCAACTTTG 57.251 29.630 0.16 0.00 39.72 2.77
1585 1643 6.913170 TGATTAGTTTCCTCATCAACTTTGC 58.087 36.000 0.00 0.00 34.92 3.68
1586 1644 6.716628 TGATTAGTTTCCTCATCAACTTTGCT 59.283 34.615 0.00 0.00 34.92 3.91
1628 1694 1.079543 GCTTCTCTGGCAAGCGAGA 60.080 57.895 6.60 6.60 37.14 4.04
1629 1695 0.461693 GCTTCTCTGGCAAGCGAGAT 60.462 55.000 7.22 0.00 37.14 2.75
1665 1731 2.146342 GATGGTCACATATGGCGGAAG 58.854 52.381 7.80 0.00 37.47 3.46
1666 1732 1.199615 TGGTCACATATGGCGGAAGA 58.800 50.000 7.80 0.00 0.00 2.87
1667 1733 1.768275 TGGTCACATATGGCGGAAGAT 59.232 47.619 7.80 0.00 0.00 2.40
1715 1782 2.421073 TCATCCGAGGTACGTACACTTG 59.579 50.000 26.02 21.16 40.78 3.16
1725 1792 5.876460 AGGTACGTACACTTGTTTTGTTTCT 59.124 36.000 26.02 6.77 0.00 2.52
1726 1793 5.961263 GGTACGTACACTTGTTTTGTTTCTG 59.039 40.000 26.02 0.00 0.00 3.02
1728 1795 6.243811 ACGTACACTTGTTTTGTTTCTGAA 57.756 33.333 0.00 0.00 0.00 3.02
1771 1838 2.535732 GCTAGCACGATTTCTCTTTGCG 60.536 50.000 10.63 0.00 34.73 4.85
1936 2003 2.569853 ACCCATCCAATCAAGTACGACA 59.430 45.455 0.00 0.00 0.00 4.35
1994 2061 5.141455 TCCAATACCCCAATGATCATTGT 57.859 39.130 35.01 24.26 44.97 2.71
2052 2119 2.119484 TTGCCCCGACGTTTCCTCAT 62.119 55.000 0.00 0.00 0.00 2.90
2057 2124 0.168128 CCGACGTTTCCTCATTTGGC 59.832 55.000 0.00 0.00 0.00 4.52
2060 2127 0.898326 ACGTTTCCTCATTTGGCCCC 60.898 55.000 0.00 0.00 0.00 5.80
2063 2130 2.796734 TTTCCTCATTTGGCCCCGGG 62.797 60.000 15.80 15.80 0.00 5.73
2108 2197 2.121538 CAGCTCCTCGTCCGATCCA 61.122 63.158 0.00 0.00 0.00 3.41
2112 2201 1.323412 CTCCTCGTCCGATCCATTCT 58.677 55.000 0.00 0.00 0.00 2.40
2204 2293 3.628989 CACAGCGGGAGTGGGATA 58.371 61.111 0.00 0.00 33.43 2.59
2304 2393 2.108566 CTCTGGGCAGCATCGGAG 59.891 66.667 8.79 8.79 0.00 4.63
2348 2437 4.868172 TCCATGACAAGGGATTGAATCT 57.132 40.909 5.03 0.00 29.18 2.40
2349 2438 5.197224 TCCATGACAAGGGATTGAATCTT 57.803 39.130 5.03 0.00 29.18 2.40
2350 2439 5.582953 TCCATGACAAGGGATTGAATCTTT 58.417 37.500 5.03 0.00 29.18 2.52
2543 2641 9.331282 ACTGATATTCTGTAGATTACAAAAGGC 57.669 33.333 0.00 0.00 38.38 4.35
2545 2643 9.905713 TGATATTCTGTAGATTACAAAAGGCTT 57.094 29.630 0.00 0.00 38.38 4.35
2644 2742 2.352388 TGATAACAGCGCCAGTTTACC 58.648 47.619 19.12 10.37 0.00 2.85
2665 2763 4.153411 CCCAAGATACTAGATCCGGACTT 58.847 47.826 6.12 0.00 0.00 3.01
2677 2775 3.842007 TCCGGACTTTGTAGTTTCCAA 57.158 42.857 0.00 0.00 33.84 3.53
2679 2777 2.225727 CCGGACTTTGTAGTTTCCAAGC 59.774 50.000 0.00 0.00 33.84 4.01
2682 2780 1.607148 ACTTTGTAGTTTCCAAGCGCC 59.393 47.619 2.29 0.00 0.00 6.53
2683 2781 1.606668 CTTTGTAGTTTCCAAGCGCCA 59.393 47.619 2.29 0.00 0.00 5.69
2684 2782 1.234821 TTGTAGTTTCCAAGCGCCAG 58.765 50.000 2.29 0.00 0.00 4.85
2686 2784 1.235724 GTAGTTTCCAAGCGCCAGTT 58.764 50.000 2.29 0.00 0.00 3.16
2687 2785 1.607148 GTAGTTTCCAAGCGCCAGTTT 59.393 47.619 2.29 0.00 0.00 2.66
2688 2786 1.975660 AGTTTCCAAGCGCCAGTTTA 58.024 45.000 2.29 0.00 0.00 2.01
2689 2787 1.607148 AGTTTCCAAGCGCCAGTTTAC 59.393 47.619 2.29 0.00 0.00 2.01
2690 2788 0.955905 TTTCCAAGCGCCAGTTTACC 59.044 50.000 2.29 0.00 0.00 2.85
2691 2789 0.891904 TTCCAAGCGCCAGTTTACCC 60.892 55.000 2.29 0.00 0.00 3.69
2694 2792 0.240945 CAAGCGCCAGTTTACCCAAG 59.759 55.000 2.29 0.00 0.00 3.61
2887 3021 9.139174 GTACATGTCCATCAATAAACCAAAAAG 57.861 33.333 0.00 0.00 0.00 2.27
3049 3187 9.535878 TTAATTATTTGTTTCGCTCAAAAAGGT 57.464 25.926 0.00 0.00 38.11 3.50
3055 3193 3.691049 TTCGCTCAAAAAGGTGAGTTG 57.309 42.857 4.28 0.00 45.75 3.16
3492 3631 6.758416 TGAAAAGATACATGTTGAGAGATCGG 59.242 38.462 2.30 0.00 0.00 4.18
3493 3632 4.862902 AGATACATGTTGAGAGATCGGG 57.137 45.455 2.30 0.00 0.00 5.14
3494 3633 3.576118 AGATACATGTTGAGAGATCGGGG 59.424 47.826 2.30 0.00 0.00 5.73
3495 3634 1.866015 ACATGTTGAGAGATCGGGGA 58.134 50.000 0.00 0.00 0.00 4.81
3496 3635 1.759445 ACATGTTGAGAGATCGGGGAG 59.241 52.381 0.00 0.00 0.00 4.30
3497 3636 1.069823 CATGTTGAGAGATCGGGGAGG 59.930 57.143 0.00 0.00 0.00 4.30
3498 3637 0.687757 TGTTGAGAGATCGGGGAGGG 60.688 60.000 0.00 0.00 0.00 4.30
3499 3638 0.688087 GTTGAGAGATCGGGGAGGGT 60.688 60.000 0.00 0.00 0.00 4.34
3500 3639 0.687757 TTGAGAGATCGGGGAGGGTG 60.688 60.000 0.00 0.00 0.00 4.61
3501 3640 1.075896 GAGAGATCGGGGAGGGTGT 60.076 63.158 0.00 0.00 0.00 4.16
3502 3641 0.688087 GAGAGATCGGGGAGGGTGTT 60.688 60.000 0.00 0.00 0.00 3.32
3503 3642 0.978146 AGAGATCGGGGAGGGTGTTG 60.978 60.000 0.00 0.00 0.00 3.33
3504 3643 1.972660 GAGATCGGGGAGGGTGTTGG 61.973 65.000 0.00 0.00 0.00 3.77
3505 3644 3.015145 ATCGGGGAGGGTGTTGGG 61.015 66.667 0.00 0.00 0.00 4.12
3508 3647 2.861974 GGGGAGGGTGTTGGGGAA 60.862 66.667 0.00 0.00 0.00 3.97
3509 3648 2.439245 GGGAGGGTGTTGGGGAAC 59.561 66.667 0.00 0.00 0.00 3.62
3510 3649 2.033602 GGAGGGTGTTGGGGAACG 59.966 66.667 0.00 0.00 0.00 3.95
3511 3650 2.826003 GGAGGGTGTTGGGGAACGT 61.826 63.158 0.00 0.00 0.00 3.99
3512 3651 1.149854 GAGGGTGTTGGGGAACGTT 59.850 57.895 0.00 0.00 0.00 3.99
3513 3652 1.152839 AGGGTGTTGGGGAACGTTG 60.153 57.895 5.00 0.00 0.00 4.10
3514 3653 2.725641 GGTGTTGGGGAACGTTGC 59.274 61.111 11.85 11.85 0.00 4.17
3515 3654 2.122167 GGTGTTGGGGAACGTTGCA 61.122 57.895 21.74 0.00 0.00 4.08
3516 3655 1.460273 GGTGTTGGGGAACGTTGCAT 61.460 55.000 21.74 0.00 0.00 3.96
3517 3656 0.318614 GTGTTGGGGAACGTTGCATG 60.319 55.000 21.74 0.00 0.00 4.06
3518 3657 1.288752 GTTGGGGAACGTTGCATGG 59.711 57.895 21.74 0.00 0.00 3.66
3519 3658 1.905843 TTGGGGAACGTTGCATGGG 60.906 57.895 21.74 0.00 0.00 4.00
3520 3659 2.034999 GGGGAACGTTGCATGGGA 59.965 61.111 21.74 0.00 0.00 4.37
3521 3660 1.605165 GGGGAACGTTGCATGGGAA 60.605 57.895 21.74 0.00 0.00 3.97
3522 3661 1.182385 GGGGAACGTTGCATGGGAAA 61.182 55.000 21.74 0.00 0.00 3.13
3523 3662 0.038618 GGGAACGTTGCATGGGAAAC 60.039 55.000 21.74 0.00 0.00 2.78
3524 3663 0.671251 GGAACGTTGCATGGGAAACA 59.329 50.000 15.52 0.00 31.43 2.83
3525 3664 1.067821 GGAACGTTGCATGGGAAACAA 59.932 47.619 15.52 0.00 31.43 2.83
3526 3665 2.482142 GGAACGTTGCATGGGAAACAAA 60.482 45.455 15.52 0.00 31.43 2.83
3527 3666 2.969628 ACGTTGCATGGGAAACAAAA 57.030 40.000 0.00 0.00 31.43 2.44
3528 3667 3.252974 ACGTTGCATGGGAAACAAAAA 57.747 38.095 0.00 0.00 31.43 1.94
3547 3686 4.766404 AAAAATTCCTACGCTCACCAAG 57.234 40.909 0.00 0.00 0.00 3.61
3548 3687 3.695830 AAATTCCTACGCTCACCAAGA 57.304 42.857 0.00 0.00 0.00 3.02
3549 3688 3.914426 AATTCCTACGCTCACCAAGAT 57.086 42.857 0.00 0.00 0.00 2.40
3550 3689 2.961526 TTCCTACGCTCACCAAGATC 57.038 50.000 0.00 0.00 0.00 2.75
3551 3690 1.847328 TCCTACGCTCACCAAGATCA 58.153 50.000 0.00 0.00 0.00 2.92
3552 3691 2.176045 TCCTACGCTCACCAAGATCAA 58.824 47.619 0.00 0.00 0.00 2.57
3553 3692 2.766263 TCCTACGCTCACCAAGATCAAT 59.234 45.455 0.00 0.00 0.00 2.57
3554 3693 3.197766 TCCTACGCTCACCAAGATCAATT 59.802 43.478 0.00 0.00 0.00 2.32
3555 3694 3.941483 CCTACGCTCACCAAGATCAATTT 59.059 43.478 0.00 0.00 0.00 1.82
3556 3695 5.105106 TCCTACGCTCACCAAGATCAATTTA 60.105 40.000 0.00 0.00 0.00 1.40
3557 3696 5.235186 CCTACGCTCACCAAGATCAATTTAG 59.765 44.000 0.00 0.00 0.00 1.85
3558 3697 3.941483 ACGCTCACCAAGATCAATTTAGG 59.059 43.478 0.00 0.00 0.00 2.69
3559 3698 4.191544 CGCTCACCAAGATCAATTTAGGA 58.808 43.478 0.00 0.00 0.00 2.94
3560 3699 4.272018 CGCTCACCAAGATCAATTTAGGAG 59.728 45.833 0.00 0.00 0.00 3.69
3561 3700 5.431765 GCTCACCAAGATCAATTTAGGAGA 58.568 41.667 0.00 0.00 0.00 3.71
3562 3701 6.060788 GCTCACCAAGATCAATTTAGGAGAT 58.939 40.000 0.00 0.00 0.00 2.75
3563 3702 6.017275 GCTCACCAAGATCAATTTAGGAGATG 60.017 42.308 0.00 0.00 0.00 2.90
3564 3703 7.199167 TCACCAAGATCAATTTAGGAGATGA 57.801 36.000 0.00 0.00 0.00 2.92
3565 3704 7.050377 TCACCAAGATCAATTTAGGAGATGAC 58.950 38.462 0.00 0.00 0.00 3.06
3566 3705 6.261826 CACCAAGATCAATTTAGGAGATGACC 59.738 42.308 0.00 0.00 0.00 4.02
3567 3706 6.069440 ACCAAGATCAATTTAGGAGATGACCA 60.069 38.462 0.00 0.00 0.00 4.02
3568 3707 7.002879 CCAAGATCAATTTAGGAGATGACCAT 58.997 38.462 0.00 0.00 0.00 3.55
3569 3708 7.174599 CCAAGATCAATTTAGGAGATGACCATC 59.825 40.741 1.90 1.90 38.09 3.51
3579 3718 3.866703 AGATGACCATCTACGAGAGGA 57.133 47.619 10.54 0.00 45.69 3.71
3580 3719 3.750371 AGATGACCATCTACGAGAGGAG 58.250 50.000 10.54 0.00 45.69 3.69
3591 3730 3.593442 ACGAGAGGAGAGATTGGATCT 57.407 47.619 0.00 0.00 43.70 2.75
3592 3731 4.715534 ACGAGAGGAGAGATTGGATCTA 57.284 45.455 0.00 0.00 40.38 1.98
3593 3732 4.394729 ACGAGAGGAGAGATTGGATCTAC 58.605 47.826 0.00 0.00 40.38 2.59
3594 3733 4.141367 ACGAGAGGAGAGATTGGATCTACA 60.141 45.833 0.00 0.00 40.38 2.74
3595 3734 5.009631 CGAGAGGAGAGATTGGATCTACAT 58.990 45.833 0.00 0.00 40.38 2.29
3596 3735 6.176896 CGAGAGGAGAGATTGGATCTACATA 58.823 44.000 0.00 0.00 40.38 2.29
3597 3736 6.093495 CGAGAGGAGAGATTGGATCTACATAC 59.907 46.154 0.00 0.00 40.38 2.39
3598 3737 6.252995 AGAGGAGAGATTGGATCTACATACC 58.747 44.000 0.00 0.00 40.38 2.73
3599 3738 5.337788 AGGAGAGATTGGATCTACATACCC 58.662 45.833 0.00 0.00 40.38 3.69
3600 3739 5.077159 AGGAGAGATTGGATCTACATACCCT 59.923 44.000 0.00 0.00 40.38 4.34
3601 3740 5.782845 GGAGAGATTGGATCTACATACCCTT 59.217 44.000 0.00 0.00 40.38 3.95
3602 3741 6.295575 GGAGAGATTGGATCTACATACCCTTG 60.296 46.154 0.00 0.00 40.38 3.61
3603 3742 6.146760 AGAGATTGGATCTACATACCCTTGT 58.853 40.000 0.00 0.00 40.38 3.16
3604 3743 7.306013 AGAGATTGGATCTACATACCCTTGTA 58.694 38.462 0.00 0.00 40.38 2.41
3605 3744 7.453126 AGAGATTGGATCTACATACCCTTGTAG 59.547 40.741 5.47 5.47 46.85 2.74
3614 3753 5.455056 ACATACCCTTGTAGATCGCTAAG 57.545 43.478 0.00 0.00 0.00 2.18
3615 3754 2.892784 ACCCTTGTAGATCGCTAAGC 57.107 50.000 0.00 0.00 0.00 3.09
3634 3773 1.797964 CGGAAGCATTAAGAAACGCG 58.202 50.000 3.53 3.53 0.00 6.01
3635 3774 1.529010 CGGAAGCATTAAGAAACGCGG 60.529 52.381 12.47 0.00 0.00 6.46
3636 3775 1.467342 GGAAGCATTAAGAAACGCGGT 59.533 47.619 12.47 0.00 0.00 5.68
3637 3776 2.095415 GGAAGCATTAAGAAACGCGGTT 60.095 45.455 10.35 10.35 0.00 4.44
3638 3777 2.611974 AGCATTAAGAAACGCGGTTG 57.388 45.000 17.39 0.00 0.00 3.77
3639 3778 2.147958 AGCATTAAGAAACGCGGTTGA 58.852 42.857 17.39 0.00 0.00 3.18
3640 3779 2.747446 AGCATTAAGAAACGCGGTTGAT 59.253 40.909 17.39 4.95 0.00 2.57
3641 3780 2.845967 GCATTAAGAAACGCGGTTGATG 59.154 45.455 17.39 13.90 0.00 3.07
3642 3781 3.669557 GCATTAAGAAACGCGGTTGATGT 60.670 43.478 17.39 0.00 0.00 3.06
3643 3782 4.436317 GCATTAAGAAACGCGGTTGATGTA 60.436 41.667 17.39 0.00 0.00 2.29
3644 3783 4.914312 TTAAGAAACGCGGTTGATGTAG 57.086 40.909 17.39 0.00 0.00 2.74
3645 3784 2.450609 AGAAACGCGGTTGATGTAGT 57.549 45.000 17.39 0.00 0.00 2.73
3646 3785 2.334838 AGAAACGCGGTTGATGTAGTC 58.665 47.619 17.39 0.00 0.00 2.59
3647 3786 1.058695 GAAACGCGGTTGATGTAGTCG 59.941 52.381 17.39 0.00 0.00 4.18
3648 3787 0.734942 AACGCGGTTGATGTAGTCGG 60.735 55.000 12.47 0.00 0.00 4.79
3649 3788 1.138036 CGCGGTTGATGTAGTCGGA 59.862 57.895 0.00 0.00 0.00 4.55
3650 3789 1.138047 CGCGGTTGATGTAGTCGGAC 61.138 60.000 0.00 0.00 0.00 4.79
3651 3790 1.138047 GCGGTTGATGTAGTCGGACG 61.138 60.000 1.89 0.00 0.00 4.79
3652 3791 0.169672 CGGTTGATGTAGTCGGACGT 59.830 55.000 1.89 0.00 0.00 4.34
3653 3792 1.792993 CGGTTGATGTAGTCGGACGTC 60.793 57.143 7.13 7.13 36.13 4.34
3654 3793 1.471684 GGTTGATGTAGTCGGACGTCT 59.528 52.381 16.46 0.00 36.48 4.18
3655 3794 2.094854 GGTTGATGTAGTCGGACGTCTT 60.095 50.000 16.46 1.76 36.48 3.01
3656 3795 3.169733 GTTGATGTAGTCGGACGTCTTC 58.830 50.000 16.46 6.31 36.48 2.87
3657 3796 1.395954 TGATGTAGTCGGACGTCTTCG 59.604 52.381 16.46 11.69 43.34 3.79
3658 3797 0.098376 ATGTAGTCGGACGTCTTCGC 59.902 55.000 16.46 7.83 41.18 4.70
3659 3798 1.579626 GTAGTCGGACGTCTTCGCG 60.580 63.158 16.46 10.54 41.18 5.87
3660 3799 1.737735 TAGTCGGACGTCTTCGCGA 60.738 57.895 16.46 3.71 41.18 5.87
3661 3800 1.086067 TAGTCGGACGTCTTCGCGAT 61.086 55.000 10.88 0.00 41.18 4.58
3662 3801 1.933519 GTCGGACGTCTTCGCGATC 60.934 63.158 10.88 3.37 41.18 3.69
3663 3802 2.651232 CGGACGTCTTCGCGATCC 60.651 66.667 10.88 13.05 41.18 3.36
3664 3803 2.488355 GGACGTCTTCGCGATCCA 59.512 61.111 18.45 0.00 41.18 3.41
3665 3804 1.153901 GGACGTCTTCGCGATCCAA 60.154 57.895 18.45 0.00 41.18 3.53
3666 3805 0.527817 GGACGTCTTCGCGATCCAAT 60.528 55.000 18.45 1.84 41.18 3.16
3667 3806 0.847035 GACGTCTTCGCGATCCAATC 59.153 55.000 10.88 1.65 41.18 2.67
3668 3807 0.172578 ACGTCTTCGCGATCCAATCA 59.827 50.000 10.88 0.00 41.18 2.57
3669 3808 0.572590 CGTCTTCGCGATCCAATCAC 59.427 55.000 10.88 0.00 0.00 3.06
3670 3809 0.572590 GTCTTCGCGATCCAATCACG 59.427 55.000 10.88 0.00 36.26 4.35
3671 3810 0.454196 TCTTCGCGATCCAATCACGA 59.546 50.000 10.88 0.00 41.48 4.35
3672 3811 1.067060 TCTTCGCGATCCAATCACGAT 59.933 47.619 10.88 0.00 42.52 3.73
3673 3812 1.453524 CTTCGCGATCCAATCACGATC 59.546 52.381 10.88 0.00 42.52 3.69
3674 3813 0.318699 TCGCGATCCAATCACGATCC 60.319 55.000 3.71 0.00 38.73 3.36
3675 3814 1.608966 CGCGATCCAATCACGATCCG 61.609 60.000 0.00 0.00 37.01 4.18
3676 3815 0.597637 GCGATCCAATCACGATCCGT 60.598 55.000 0.00 0.00 42.36 4.69
3677 3816 1.409412 CGATCCAATCACGATCCGTC 58.591 55.000 0.00 0.00 38.32 4.79
3678 3817 1.784525 GATCCAATCACGATCCGTCC 58.215 55.000 0.00 0.00 38.32 4.79
3679 3818 0.393077 ATCCAATCACGATCCGTCCC 59.607 55.000 0.00 0.00 38.32 4.46
3680 3819 0.973496 TCCAATCACGATCCGTCCCA 60.973 55.000 0.00 0.00 38.32 4.37
3681 3820 0.810031 CCAATCACGATCCGTCCCAC 60.810 60.000 0.00 0.00 38.32 4.61
3682 3821 1.141019 AATCACGATCCGTCCCACG 59.859 57.895 0.00 0.00 38.32 4.94
3683 3822 1.317431 AATCACGATCCGTCCCACGA 61.317 55.000 0.00 0.00 46.05 4.35
3684 3823 1.317431 ATCACGATCCGTCCCACGAA 61.317 55.000 0.00 0.00 46.05 3.85
3685 3824 1.804326 CACGATCCGTCCCACGAAC 60.804 63.158 0.00 0.00 46.05 3.95
3686 3825 1.975407 ACGATCCGTCCCACGAACT 60.975 57.895 0.00 0.00 46.05 3.01
3687 3826 1.226603 CGATCCGTCCCACGAACTC 60.227 63.158 0.00 0.00 46.05 3.01
3688 3827 1.141234 GATCCGTCCCACGAACTCC 59.859 63.158 0.00 0.00 46.05 3.85
3689 3828 2.609183 GATCCGTCCCACGAACTCCG 62.609 65.000 0.00 0.00 46.05 4.63
3690 3829 3.367743 CCGTCCCACGAACTCCGA 61.368 66.667 0.00 0.00 46.05 4.55
3691 3830 2.707849 CCGTCCCACGAACTCCGAT 61.708 63.158 0.00 0.00 46.05 4.18
3692 3831 1.226603 CGTCCCACGAACTCCGATC 60.227 63.158 0.00 0.00 46.05 3.69
3693 3832 1.226603 GTCCCACGAACTCCGATCG 60.227 63.158 8.51 8.51 45.47 3.69
3694 3833 1.377594 TCCCACGAACTCCGATCGA 60.378 57.895 18.66 1.60 42.76 3.59
3695 3834 0.961857 TCCCACGAACTCCGATCGAA 60.962 55.000 18.66 0.00 42.76 3.71
3696 3835 0.525668 CCCACGAACTCCGATCGAAG 60.526 60.000 18.66 8.69 42.76 3.79
3697 3836 0.170561 CCACGAACTCCGATCGAAGT 59.829 55.000 18.66 9.57 42.76 3.01
3698 3837 1.260206 CACGAACTCCGATCGAAGTG 58.740 55.000 18.66 12.43 42.76 3.16
3699 3838 0.456312 ACGAACTCCGATCGAAGTGC 60.456 55.000 18.66 10.11 42.76 4.40
3700 3839 1.140407 CGAACTCCGATCGAAGTGCC 61.140 60.000 18.66 6.88 42.76 5.01
3701 3840 0.108804 GAACTCCGATCGAAGTGCCA 60.109 55.000 18.66 0.00 0.00 4.92
3702 3841 0.320374 AACTCCGATCGAAGTGCCAA 59.680 50.000 18.66 0.00 0.00 4.52
3703 3842 0.320374 ACTCCGATCGAAGTGCCAAA 59.680 50.000 18.66 0.00 0.00 3.28
3704 3843 1.002366 CTCCGATCGAAGTGCCAAAG 58.998 55.000 18.66 0.00 0.00 2.77
3705 3844 0.391130 TCCGATCGAAGTGCCAAAGG 60.391 55.000 18.66 0.00 0.00 3.11
3706 3845 0.391130 CCGATCGAAGTGCCAAAGGA 60.391 55.000 18.66 0.00 0.00 3.36
3707 3846 0.721718 CGATCGAAGTGCCAAAGGAC 59.278 55.000 10.26 0.00 0.00 3.85
3708 3847 0.721718 GATCGAAGTGCCAAAGGACG 59.278 55.000 0.00 0.00 0.00 4.79
3709 3848 0.673644 ATCGAAGTGCCAAAGGACGG 60.674 55.000 0.00 0.00 0.00 4.79
3722 3861 3.774702 GACGGCACCTTCGCGTTC 61.775 66.667 5.77 0.00 0.00 3.95
3723 3862 4.595538 ACGGCACCTTCGCGTTCA 62.596 61.111 5.77 0.00 0.00 3.18
3724 3863 3.342627 CGGCACCTTCGCGTTCAA 61.343 61.111 5.77 0.00 0.00 2.69
3725 3864 2.251371 GGCACCTTCGCGTTCAAC 59.749 61.111 5.77 0.00 0.00 3.18
3726 3865 2.539338 GGCACCTTCGCGTTCAACA 61.539 57.895 5.77 0.00 0.00 3.33
3727 3866 1.368850 GCACCTTCGCGTTCAACAC 60.369 57.895 5.77 0.00 0.00 3.32
3728 3867 2.010670 CACCTTCGCGTTCAACACA 58.989 52.632 5.77 0.00 0.00 3.72
3729 3868 0.315869 CACCTTCGCGTTCAACACAC 60.316 55.000 5.77 0.00 0.00 3.82
3730 3869 1.083657 CCTTCGCGTTCAACACACG 60.084 57.895 5.77 0.00 40.75 4.49
3731 3870 1.634225 CTTCGCGTTCAACACACGT 59.366 52.632 5.77 0.00 39.92 4.49
3732 3871 0.847670 CTTCGCGTTCAACACACGTA 59.152 50.000 5.77 0.00 39.92 3.57
3733 3872 0.571661 TTCGCGTTCAACACACGTAC 59.428 50.000 5.77 0.00 39.92 3.67
3734 3873 1.155158 CGCGTTCAACACACGTACG 60.155 57.895 15.01 15.01 39.92 3.67
3735 3874 1.199859 GCGTTCAACACACGTACGG 59.800 57.895 21.06 11.05 39.92 4.02
3736 3875 1.481819 GCGTTCAACACACGTACGGT 61.482 55.000 21.06 11.73 39.92 4.83
3737 3876 0.922717 CGTTCAACACACGTACGGTT 59.077 50.000 21.06 11.24 32.80 4.44
3738 3877 1.324134 CGTTCAACACACGTACGGTTT 59.676 47.619 21.06 5.02 32.80 3.27
3739 3878 2.696255 GTTCAACACACGTACGGTTTG 58.304 47.619 21.06 14.93 32.51 2.93
3740 3879 2.290531 TCAACACACGTACGGTTTGA 57.709 45.000 21.06 17.34 30.78 2.69
3741 3880 2.823984 TCAACACACGTACGGTTTGAT 58.176 42.857 21.06 5.16 30.78 2.57
3742 3881 2.540516 TCAACACACGTACGGTTTGATG 59.459 45.455 21.06 16.42 32.27 3.07
3743 3882 2.512485 ACACACGTACGGTTTGATGA 57.488 45.000 21.06 0.00 30.78 2.92
3744 3883 2.129607 ACACACGTACGGTTTGATGAC 58.870 47.619 21.06 0.00 30.78 3.06
3745 3884 1.123576 CACACGTACGGTTTGATGACG 59.876 52.381 21.06 1.26 39.37 4.35
3746 3885 0.092351 CACGTACGGTTTGATGACGC 59.908 55.000 21.06 0.00 37.02 5.19
3747 3886 1.010419 ACGTACGGTTTGATGACGCC 61.010 55.000 21.06 0.00 37.02 5.68
3748 3887 0.734942 CGTACGGTTTGATGACGCCT 60.735 55.000 7.57 0.00 0.00 5.52
3749 3888 1.435577 GTACGGTTTGATGACGCCTT 58.564 50.000 0.00 0.00 0.00 4.35
3750 3889 1.392510 GTACGGTTTGATGACGCCTTC 59.607 52.381 0.00 0.00 0.00 3.46
3751 3890 0.250124 ACGGTTTGATGACGCCTTCA 60.250 50.000 0.00 0.00 39.11 3.02
3752 3891 0.165944 CGGTTTGATGACGCCTTCAC 59.834 55.000 0.00 0.00 36.92 3.18
3753 3892 0.521735 GGTTTGATGACGCCTTCACC 59.478 55.000 0.00 0.00 36.92 4.02
3754 3893 1.523758 GTTTGATGACGCCTTCACCT 58.476 50.000 0.00 0.00 36.92 4.00
3755 3894 1.464997 GTTTGATGACGCCTTCACCTC 59.535 52.381 0.00 0.00 36.92 3.85
3756 3895 0.036388 TTGATGACGCCTTCACCTCC 60.036 55.000 0.00 0.00 36.92 4.30
3757 3896 0.904865 TGATGACGCCTTCACCTCCT 60.905 55.000 0.00 0.00 36.92 3.69
3758 3897 0.179097 GATGACGCCTTCACCTCCTC 60.179 60.000 0.00 0.00 36.92 3.71
3759 3898 1.949847 ATGACGCCTTCACCTCCTCG 61.950 60.000 0.00 0.00 36.92 4.63
3760 3899 2.282958 ACGCCTTCACCTCCTCGA 60.283 61.111 0.00 0.00 0.00 4.04
3761 3900 1.668101 GACGCCTTCACCTCCTCGAT 61.668 60.000 0.00 0.00 0.00 3.59
3762 3901 1.066587 CGCCTTCACCTCCTCGATC 59.933 63.158 0.00 0.00 0.00 3.69
3763 3902 1.388065 CGCCTTCACCTCCTCGATCT 61.388 60.000 0.00 0.00 0.00 2.75
3764 3903 1.693627 GCCTTCACCTCCTCGATCTA 58.306 55.000 0.00 0.00 0.00 1.98
3765 3904 1.611491 GCCTTCACCTCCTCGATCTAG 59.389 57.143 0.00 0.00 0.00 2.43
3766 3905 1.611491 CCTTCACCTCCTCGATCTAGC 59.389 57.143 0.00 0.00 0.00 3.42
3767 3906 1.265635 CTTCACCTCCTCGATCTAGCG 59.734 57.143 0.00 0.00 0.00 4.26
3768 3907 0.468648 TCACCTCCTCGATCTAGCGA 59.531 55.000 0.00 0.00 38.74 4.93
3777 3916 3.099524 GATCTAGCGAGCGATGGTG 57.900 57.895 0.00 0.00 0.00 4.17
3778 3917 0.593618 GATCTAGCGAGCGATGGTGA 59.406 55.000 0.00 0.00 0.00 4.02
3779 3918 1.001268 GATCTAGCGAGCGATGGTGAA 60.001 52.381 0.00 0.00 0.00 3.18
3780 3919 0.382158 TCTAGCGAGCGATGGTGAAG 59.618 55.000 0.00 0.00 0.00 3.02
3781 3920 0.101399 CTAGCGAGCGATGGTGAAGT 59.899 55.000 0.00 0.00 0.00 3.01
3782 3921 1.333931 CTAGCGAGCGATGGTGAAGTA 59.666 52.381 0.00 0.00 0.00 2.24
3783 3922 0.101399 AGCGAGCGATGGTGAAGTAG 59.899 55.000 0.00 0.00 0.00 2.57
3784 3923 0.179134 GCGAGCGATGGTGAAGTAGT 60.179 55.000 0.00 0.00 0.00 2.73
3785 3924 1.065102 GCGAGCGATGGTGAAGTAGTA 59.935 52.381 0.00 0.00 0.00 1.82
3786 3925 2.855187 GCGAGCGATGGTGAAGTAGTAG 60.855 54.545 0.00 0.00 0.00 2.57
3787 3926 2.733517 GAGCGATGGTGAAGTAGTAGC 58.266 52.381 0.00 0.00 0.00 3.58
3788 3927 2.359531 GAGCGATGGTGAAGTAGTAGCT 59.640 50.000 0.00 0.00 34.92 3.32
3789 3928 2.359531 AGCGATGGTGAAGTAGTAGCTC 59.640 50.000 0.00 0.00 0.00 4.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.961360 ACAATATCGTTCATAGACTCCTCA 57.039 37.500 0.00 0.00 0.00 3.86
1 2 7.175293 AGGTACAATATCGTTCATAGACTCCTC 59.825 40.741 0.00 0.00 0.00 3.71
2 3 7.005296 AGGTACAATATCGTTCATAGACTCCT 58.995 38.462 0.00 0.00 0.00 3.69
3 4 7.175293 AGAGGTACAATATCGTTCATAGACTCC 59.825 40.741 0.00 0.00 0.00 3.85
4 5 8.101654 AGAGGTACAATATCGTTCATAGACTC 57.898 38.462 0.00 0.00 0.00 3.36
5 6 8.466617 AAGAGGTACAATATCGTTCATAGACT 57.533 34.615 0.00 0.00 0.00 3.24
6 7 8.569641 AGAAGAGGTACAATATCGTTCATAGAC 58.430 37.037 0.00 0.00 0.00 2.59
7 8 8.693120 AGAAGAGGTACAATATCGTTCATAGA 57.307 34.615 0.00 0.00 0.00 1.98
8 9 9.400638 GAAGAAGAGGTACAATATCGTTCATAG 57.599 37.037 0.00 0.00 0.00 2.23
9 10 9.132923 AGAAGAAGAGGTACAATATCGTTCATA 57.867 33.333 0.00 0.00 0.00 2.15
10 11 8.012957 AGAAGAAGAGGTACAATATCGTTCAT 57.987 34.615 0.00 0.00 0.00 2.57
11 12 7.406031 AGAAGAAGAGGTACAATATCGTTCA 57.594 36.000 0.00 0.00 0.00 3.18
12 13 8.838365 TCTAGAAGAAGAGGTACAATATCGTTC 58.162 37.037 0.00 0.00 0.00 3.95
13 14 8.623030 GTCTAGAAGAAGAGGTACAATATCGTT 58.377 37.037 0.00 0.00 0.00 3.85
14 15 7.041916 CGTCTAGAAGAAGAGGTACAATATCGT 60.042 40.741 0.00 0.00 0.00 3.73
15 16 7.171167 TCGTCTAGAAGAAGAGGTACAATATCG 59.829 40.741 5.85 0.00 33.95 2.92
16 17 8.380743 TCGTCTAGAAGAAGAGGTACAATATC 57.619 38.462 5.85 0.00 33.95 1.63
17 18 8.788806 CATCGTCTAGAAGAAGAGGTACAATAT 58.211 37.037 12.50 0.00 36.25 1.28
18 19 7.774157 ACATCGTCTAGAAGAAGAGGTACAATA 59.226 37.037 16.16 0.00 43.62 1.90
19 20 6.603997 ACATCGTCTAGAAGAAGAGGTACAAT 59.396 38.462 16.16 0.00 43.62 2.71
20 21 5.944599 ACATCGTCTAGAAGAAGAGGTACAA 59.055 40.000 16.16 0.00 43.62 2.41
21 22 5.498393 ACATCGTCTAGAAGAAGAGGTACA 58.502 41.667 16.16 0.00 43.62 2.90
22 23 7.408910 GTTACATCGTCTAGAAGAAGAGGTAC 58.591 42.308 16.16 8.27 44.80 3.34
23 24 6.541641 GGTTACATCGTCTAGAAGAAGAGGTA 59.458 42.308 16.16 11.48 43.62 3.08
24 25 5.357596 GGTTACATCGTCTAGAAGAAGAGGT 59.642 44.000 16.16 13.11 46.18 3.85
25 26 5.504337 CGGTTACATCGTCTAGAAGAAGAGG 60.504 48.000 16.16 8.03 39.68 3.69
26 27 5.064962 ACGGTTACATCGTCTAGAAGAAGAG 59.935 44.000 16.16 10.20 36.25 2.85
27 28 4.940046 ACGGTTACATCGTCTAGAAGAAGA 59.060 41.667 16.16 4.74 37.16 2.87
28 29 5.232610 ACGGTTACATCGTCTAGAAGAAG 57.767 43.478 12.50 10.62 35.87 2.85
29 30 5.633830 AACGGTTACATCGTCTAGAAGAA 57.366 39.130 12.50 0.00 40.18 2.52
30 31 5.633830 AAACGGTTACATCGTCTAGAAGA 57.366 39.130 10.90 10.90 40.18 2.87
31 32 6.701432 AAAAACGGTTACATCGTCTAGAAG 57.299 37.500 0.00 0.00 40.18 2.85
85 89 4.111916 CACCAAACACTTTGCGATCTTTT 58.888 39.130 0.00 0.00 39.31 2.27
204 209 4.469657 TGGCCTATCCAAATGTGTATTCC 58.530 43.478 3.32 0.00 43.21 3.01
239 244 2.031157 ACACGCTTTGCCAATTCAGTAC 60.031 45.455 0.00 0.00 0.00 2.73
248 253 0.463654 AAGAGTGACACGCTTTGCCA 60.464 50.000 17.64 0.00 34.57 4.92
249 254 0.040958 CAAGAGTGACACGCTTTGCC 60.041 55.000 20.31 0.00 36.08 4.52
251 256 1.070309 GCTCAAGAGTGACACGCTTTG 60.070 52.381 20.31 16.48 36.08 2.77
252 257 1.221414 GCTCAAGAGTGACACGCTTT 58.779 50.000 20.31 5.24 36.08 3.51
253 258 0.104855 TGCTCAAGAGTGACACGCTT 59.895 50.000 17.64 17.64 38.79 4.68
416 471 7.658575 CCTTTTGAAAATTGGAGACATGAATGT 59.341 33.333 0.00 0.00 45.16 2.71
679 734 1.436195 CGTATGGACACCGGCAATGG 61.436 60.000 0.00 0.00 0.00 3.16
758 816 1.639635 AAGGGAGGCATGGCTACTGG 61.640 60.000 28.92 0.00 0.00 4.00
835 893 4.141937 CGAACTGGAGGTTATCATCAAGGA 60.142 45.833 0.00 0.00 38.41 3.36
838 896 4.020573 ACACGAACTGGAGGTTATCATCAA 60.021 41.667 0.00 0.00 38.41 2.57
839 897 3.513912 ACACGAACTGGAGGTTATCATCA 59.486 43.478 0.00 0.00 38.41 3.07
840 898 3.865745 CACACGAACTGGAGGTTATCATC 59.134 47.826 0.00 0.00 38.41 2.92
841 899 3.861840 CACACGAACTGGAGGTTATCAT 58.138 45.455 0.00 0.00 38.41 2.45
842 900 2.611971 GCACACGAACTGGAGGTTATCA 60.612 50.000 0.00 0.00 38.41 2.15
843 901 2.000447 GCACACGAACTGGAGGTTATC 59.000 52.381 0.00 0.00 38.41 1.75
844 902 1.338769 GGCACACGAACTGGAGGTTAT 60.339 52.381 0.00 0.00 38.41 1.89
845 903 0.034337 GGCACACGAACTGGAGGTTA 59.966 55.000 0.00 0.00 38.41 2.85
846 904 1.227853 GGCACACGAACTGGAGGTT 60.228 57.895 0.00 0.00 41.40 3.50
847 905 1.696097 AAGGCACACGAACTGGAGGT 61.696 55.000 0.00 0.00 0.00 3.85
848 906 0.535102 AAAGGCACACGAACTGGAGG 60.535 55.000 0.00 0.00 0.00 4.30
849 907 0.588252 CAAAGGCACACGAACTGGAG 59.412 55.000 0.00 0.00 0.00 3.86
850 908 0.179234 TCAAAGGCACACGAACTGGA 59.821 50.000 0.00 0.00 0.00 3.86
851 909 1.197721 GATCAAAGGCACACGAACTGG 59.802 52.381 0.00 0.00 0.00 4.00
852 910 1.872952 TGATCAAAGGCACACGAACTG 59.127 47.619 0.00 0.00 0.00 3.16
853 911 2.254546 TGATCAAAGGCACACGAACT 57.745 45.000 0.00 0.00 0.00 3.01
854 912 4.651994 CTTATGATCAAAGGCACACGAAC 58.348 43.478 0.00 0.00 0.00 3.95
855 913 3.126858 GCTTATGATCAAAGGCACACGAA 59.873 43.478 0.00 0.00 0.00 3.85
856 914 2.677836 GCTTATGATCAAAGGCACACGA 59.322 45.455 0.00 0.00 0.00 4.35
857 915 2.223340 GGCTTATGATCAAAGGCACACG 60.223 50.000 25.28 0.00 45.93 4.49
858 916 3.427161 GGCTTATGATCAAAGGCACAC 57.573 47.619 25.28 9.58 45.93 3.82
862 920 0.954452 CGGGGCTTATGATCAAAGGC 59.046 55.000 23.65 23.65 45.93 4.35
863 921 2.222027 GTCGGGGCTTATGATCAAAGG 58.778 52.381 0.00 0.00 0.00 3.11
864 922 2.222027 GGTCGGGGCTTATGATCAAAG 58.778 52.381 0.00 6.40 0.00 2.77
865 923 1.133915 GGGTCGGGGCTTATGATCAAA 60.134 52.381 0.00 0.00 0.00 2.69
866 924 0.472471 GGGTCGGGGCTTATGATCAA 59.528 55.000 0.00 0.00 0.00 2.57
867 925 1.415672 GGGGTCGGGGCTTATGATCA 61.416 60.000 0.00 0.00 0.00 2.92
868 926 1.375326 GGGGTCGGGGCTTATGATC 59.625 63.158 0.00 0.00 0.00 2.92
869 927 1.385347 TGGGGTCGGGGCTTATGAT 60.385 57.895 0.00 0.00 0.00 2.45
870 928 2.041430 TGGGGTCGGGGCTTATGA 59.959 61.111 0.00 0.00 0.00 2.15
871 929 1.994885 ATGTGGGGTCGGGGCTTATG 61.995 60.000 0.00 0.00 0.00 1.90
872 930 1.696314 ATGTGGGGTCGGGGCTTAT 60.696 57.895 0.00 0.00 0.00 1.73
873 931 2.285818 ATGTGGGGTCGGGGCTTA 60.286 61.111 0.00 0.00 0.00 3.09
874 932 4.047125 CATGTGGGGTCGGGGCTT 62.047 66.667 0.00 0.00 0.00 4.35
876 934 4.796495 GACATGTGGGGTCGGGGC 62.796 72.222 1.15 0.00 0.00 5.80
877 935 3.326578 TGACATGTGGGGTCGGGG 61.327 66.667 1.15 0.00 38.10 5.73
878 936 2.268920 CTGACATGTGGGGTCGGG 59.731 66.667 1.15 0.00 37.87 5.14
879 937 1.375908 CACTGACATGTGGGGTCGG 60.376 63.158 1.15 0.00 45.16 4.79
880 938 0.670546 GTCACTGACATGTGGGGTCG 60.671 60.000 1.15 0.00 38.10 4.79
881 939 0.396435 TGTCACTGACATGTGGGGTC 59.604 55.000 1.15 0.00 37.67 4.46
882 940 0.108585 GTGTCACTGACATGTGGGGT 59.891 55.000 14.95 0.00 44.63 4.95
883 941 0.397941 AGTGTCACTGACATGTGGGG 59.602 55.000 14.95 0.00 44.63 4.96
893 951 1.628340 TGATAACCCCCAGTGTCACTG 59.372 52.381 23.72 23.72 45.53 3.66
894 952 2.038863 TGATAACCCCCAGTGTCACT 57.961 50.000 0.00 0.00 0.00 3.41
895 953 2.238646 TGATGATAACCCCCAGTGTCAC 59.761 50.000 0.00 0.00 29.63 3.67
896 954 2.556766 TGATGATAACCCCCAGTGTCA 58.443 47.619 0.00 0.00 0.00 3.58
897 955 3.644966 TTGATGATAACCCCCAGTGTC 57.355 47.619 0.00 0.00 0.00 3.67
898 956 4.608170 AATTGATGATAACCCCCAGTGT 57.392 40.909 0.00 0.00 0.00 3.55
899 957 6.209391 GGAATAATTGATGATAACCCCCAGTG 59.791 42.308 0.00 0.00 0.00 3.66
900 958 6.104691 AGGAATAATTGATGATAACCCCCAGT 59.895 38.462 0.00 0.00 0.00 4.00
901 959 6.435277 CAGGAATAATTGATGATAACCCCCAG 59.565 42.308 0.00 0.00 0.00 4.45
902 960 6.314120 CAGGAATAATTGATGATAACCCCCA 58.686 40.000 0.00 0.00 0.00 4.96
903 961 5.185828 GCAGGAATAATTGATGATAACCCCC 59.814 44.000 0.00 0.00 0.00 5.40
904 962 6.012745 AGCAGGAATAATTGATGATAACCCC 58.987 40.000 0.00 0.00 0.00 4.95
905 963 7.309438 GGAAGCAGGAATAATTGATGATAACCC 60.309 40.741 0.00 0.00 0.00 4.11
906 964 7.231317 TGGAAGCAGGAATAATTGATGATAACC 59.769 37.037 0.00 0.00 0.00 2.85
907 965 8.169977 TGGAAGCAGGAATAATTGATGATAAC 57.830 34.615 0.00 0.00 0.00 1.89
908 966 8.799367 CATGGAAGCAGGAATAATTGATGATAA 58.201 33.333 0.00 0.00 0.00 1.75
909 967 7.094075 GCATGGAAGCAGGAATAATTGATGATA 60.094 37.037 0.00 0.00 0.00 2.15
910 968 6.295123 GCATGGAAGCAGGAATAATTGATGAT 60.295 38.462 0.00 0.00 0.00 2.45
911 969 5.010314 GCATGGAAGCAGGAATAATTGATGA 59.990 40.000 0.00 0.00 0.00 2.92
912 970 5.221362 TGCATGGAAGCAGGAATAATTGATG 60.221 40.000 0.00 0.00 40.11 3.07
913 971 4.897076 TGCATGGAAGCAGGAATAATTGAT 59.103 37.500 0.00 0.00 40.11 2.57
914 972 4.279982 TGCATGGAAGCAGGAATAATTGA 58.720 39.130 0.00 0.00 40.11 2.57
915 973 4.659111 TGCATGGAAGCAGGAATAATTG 57.341 40.909 0.00 0.00 40.11 2.32
960 1018 9.774742 GTATAGTAAGGAAAATGTTGAAAGCAG 57.225 33.333 0.00 0.00 0.00 4.24
983 1041 0.979187 TCGGGCGGGAGGAAAAGTAT 60.979 55.000 0.00 0.00 0.00 2.12
1464 1522 0.109086 ATCGACCGTGTGCTCTTGAG 60.109 55.000 0.00 0.00 0.00 3.02
1534 1592 1.590238 GCATCGATCACAAGGAACTCG 59.410 52.381 0.00 0.00 38.49 4.18
1571 1629 8.562892 CATATAAAGGTAGCAAAGTTGATGAGG 58.437 37.037 0.00 0.00 0.00 3.86
1579 1637 6.001449 TCTGCCATATAAAGGTAGCAAAGT 57.999 37.500 7.53 0.00 38.57 2.66
1580 1638 7.516198 AATCTGCCATATAAAGGTAGCAAAG 57.484 36.000 7.53 0.00 38.57 2.77
1581 1639 8.436778 TCTAATCTGCCATATAAAGGTAGCAAA 58.563 33.333 7.53 0.00 38.57 3.68
1582 1640 7.973402 TCTAATCTGCCATATAAAGGTAGCAA 58.027 34.615 7.53 0.00 38.57 3.91
1583 1641 7.553504 TCTAATCTGCCATATAAAGGTAGCA 57.446 36.000 7.53 0.00 38.57 3.49
1584 1642 7.550906 CCTTCTAATCTGCCATATAAAGGTAGC 59.449 40.741 7.53 0.00 38.57 3.58
1585 1643 7.550906 GCCTTCTAATCTGCCATATAAAGGTAG 59.449 40.741 6.41 6.41 39.86 3.18
1586 1644 7.237679 AGCCTTCTAATCTGCCATATAAAGGTA 59.762 37.037 0.00 0.00 34.57 3.08
1628 1694 2.621338 CATCAACCAGCGTGTCAGTAT 58.379 47.619 0.00 0.00 0.00 2.12
1629 1695 1.337728 CCATCAACCAGCGTGTCAGTA 60.338 52.381 0.00 0.00 0.00 2.74
1665 1731 4.806640 TTTGGATTTCTTTCTGCCCATC 57.193 40.909 0.00 0.00 0.00 3.51
1666 1732 4.594491 AGTTTTGGATTTCTTTCTGCCCAT 59.406 37.500 0.00 0.00 0.00 4.00
1667 1733 3.966665 AGTTTTGGATTTCTTTCTGCCCA 59.033 39.130 0.00 0.00 0.00 5.36
1715 1782 8.460831 TTTAGTGCTTCTTTCAGAAACAAAAC 57.539 30.769 0.00 0.00 32.77 2.43
1739 1806 9.413048 GAGAAATCGTGCTAGCTATTATAGTTT 57.587 33.333 17.23 6.29 0.00 2.66
1742 1809 9.632807 AAAGAGAAATCGTGCTAGCTATTATAG 57.367 33.333 17.23 0.00 0.00 1.31
1771 1838 1.510623 CAAATCAGTGCGAGCGTGC 60.511 57.895 0.00 0.00 0.00 5.34
1936 2003 1.354506 GCTCGCCGTAGTACGTGAT 59.645 57.895 20.60 0.00 40.58 3.06
2013 2080 2.325583 AACTGACGAGGTTTTCTGCA 57.674 45.000 0.00 0.00 0.00 4.41
2063 2130 3.279116 TCAACGCTGGTGCACTGC 61.279 61.111 17.98 19.23 39.64 4.40
2108 2197 1.448540 CTCGTCCGCCTGCAAGAAT 60.449 57.895 0.00 0.00 34.07 2.40
2112 2201 4.742201 GAGCTCGTCCGCCTGCAA 62.742 66.667 0.00 0.00 0.00 4.08
2487 2585 7.173907 GCACTGGTTATTACGGAGTACTATCTA 59.826 40.741 0.00 0.00 45.76 1.98
2488 2586 6.016443 GCACTGGTTATTACGGAGTACTATCT 60.016 42.308 0.00 0.00 45.76 1.98
2489 2587 6.148264 GCACTGGTTATTACGGAGTACTATC 58.852 44.000 0.00 0.00 45.76 2.08
2490 2588 5.595542 TGCACTGGTTATTACGGAGTACTAT 59.404 40.000 0.00 0.00 45.76 2.12
2491 2589 4.949238 TGCACTGGTTATTACGGAGTACTA 59.051 41.667 0.00 0.00 45.76 1.82
2492 2590 3.765511 TGCACTGGTTATTACGGAGTACT 59.234 43.478 0.00 0.00 45.76 2.73
2493 2591 3.861689 GTGCACTGGTTATTACGGAGTAC 59.138 47.826 10.32 0.00 45.76 2.73
2494 2592 3.510753 TGTGCACTGGTTATTACGGAGTA 59.489 43.478 19.41 0.00 45.11 2.59
2495 2593 7.480958 AGTTGTGCACTGGTTATTACGGAGT 62.481 44.000 19.41 0.00 38.61 3.85
2496 2594 2.967362 TGTGCACTGGTTATTACGGAG 58.033 47.619 19.41 0.00 0.00 4.63
2497 2595 3.068560 GTTGTGCACTGGTTATTACGGA 58.931 45.455 19.41 0.00 0.00 4.69
2498 2596 3.071479 AGTTGTGCACTGGTTATTACGG 58.929 45.455 19.41 0.00 32.83 4.02
2499 2597 4.391830 ATCAGTTGTGCACTGGTTATTACG 59.608 41.667 19.41 0.00 45.46 3.18
2500 2598 5.880054 ATCAGTTGTGCACTGGTTATTAC 57.120 39.130 19.41 3.56 45.46 1.89
2543 2641 9.411801 ACGTATACATATGCTGATCTTTACAAG 57.588 33.333 1.58 0.00 0.00 3.16
2545 2643 9.836076 GTACGTATACATATGCTGATCTTTACA 57.164 33.333 1.58 0.00 0.00 2.41
2644 2742 5.069251 ACAAAGTCCGGATCTAGTATCTTGG 59.931 44.000 7.81 3.55 0.00 3.61
2665 2763 1.234821 CTGGCGCTTGGAAACTACAA 58.765 50.000 7.64 0.00 0.00 2.41
2677 2775 0.328258 ATCTTGGGTAAACTGGCGCT 59.672 50.000 7.64 0.00 0.00 5.92
2679 2777 1.821216 ACATCTTGGGTAAACTGGCG 58.179 50.000 0.00 0.00 0.00 5.69
2682 2780 5.964958 ACATCAACATCTTGGGTAAACTG 57.035 39.130 0.00 0.00 0.00 3.16
2683 2781 7.402054 TCATACATCAACATCTTGGGTAAACT 58.598 34.615 0.00 0.00 0.00 2.66
2684 2782 7.552687 TCTCATACATCAACATCTTGGGTAAAC 59.447 37.037 0.00 0.00 0.00 2.01
2686 2784 7.194112 TCTCATACATCAACATCTTGGGTAA 57.806 36.000 0.00 0.00 0.00 2.85
2687 2785 6.806668 TCTCATACATCAACATCTTGGGTA 57.193 37.500 0.00 0.00 0.00 3.69
2688 2786 5.698741 TCTCATACATCAACATCTTGGGT 57.301 39.130 0.00 0.00 0.00 4.51
2689 2787 7.219322 TGTATCTCATACATCAACATCTTGGG 58.781 38.462 0.00 0.00 40.60 4.12
2690 2788 7.930325 ACTGTATCTCATACATCAACATCTTGG 59.070 37.037 0.00 0.00 44.11 3.61
2691 2789 8.762426 CACTGTATCTCATACATCAACATCTTG 58.238 37.037 0.00 0.00 44.11 3.02
2694 2792 7.436933 TCCACTGTATCTCATACATCAACATC 58.563 38.462 0.00 0.00 44.11 3.06
3026 3160 7.206687 TCACCTTTTTGAGCGAAACAAATAAT 58.793 30.769 0.00 0.00 37.15 1.28
3049 3187 3.096092 AGTTCAAGCAAAACCCAACTCA 58.904 40.909 0.00 0.00 0.00 3.41
3055 3193 4.590850 ATGAAGAGTTCAAGCAAAACCC 57.409 40.909 0.00 0.00 43.95 4.11
3197 3336 8.391305 TCATTCCATCCAATTCCCTTATTTTT 57.609 30.769 0.00 0.00 0.00 1.94
3207 3346 4.279420 GGTAAGCCTCATTCCATCCAATTC 59.721 45.833 0.00 0.00 0.00 2.17
3401 3540 9.114952 TGATATTTGATAGCGTGGAATAAAACA 57.885 29.630 0.00 0.00 0.00 2.83
3473 3612 3.574396 TCCCCGATCTCTCAACATGTATC 59.426 47.826 0.00 0.00 0.00 2.24
3492 3631 2.439245 GTTCCCCAACACCCTCCC 59.561 66.667 0.00 0.00 32.14 4.30
3493 3632 2.033602 CGTTCCCCAACACCCTCC 59.966 66.667 0.00 0.00 32.14 4.30
3494 3633 1.149854 AACGTTCCCCAACACCCTC 59.850 57.895 0.00 0.00 32.14 4.30
3495 3634 1.152839 CAACGTTCCCCAACACCCT 60.153 57.895 0.00 0.00 32.14 4.34
3496 3635 2.852180 GCAACGTTCCCCAACACCC 61.852 63.158 0.00 0.00 32.14 4.61
3497 3636 1.460273 ATGCAACGTTCCCCAACACC 61.460 55.000 0.00 0.00 32.14 4.16
3498 3637 0.318614 CATGCAACGTTCCCCAACAC 60.319 55.000 0.00 0.00 32.14 3.32
3499 3638 1.459455 CCATGCAACGTTCCCCAACA 61.459 55.000 0.00 0.00 32.14 3.33
3500 3639 1.288752 CCATGCAACGTTCCCCAAC 59.711 57.895 0.00 0.00 0.00 3.77
3501 3640 1.905843 CCCATGCAACGTTCCCCAA 60.906 57.895 0.00 0.00 0.00 4.12
3502 3641 2.282816 CCCATGCAACGTTCCCCA 60.283 61.111 0.00 0.00 0.00 4.96
3503 3642 1.182385 TTTCCCATGCAACGTTCCCC 61.182 55.000 0.00 0.00 0.00 4.81
3504 3643 0.038618 GTTTCCCATGCAACGTTCCC 60.039 55.000 0.00 0.00 0.00 3.97
3505 3644 0.671251 TGTTTCCCATGCAACGTTCC 59.329 50.000 0.00 0.00 0.00 3.62
3506 3645 2.500509 TTGTTTCCCATGCAACGTTC 57.499 45.000 0.00 0.00 0.00 3.95
3507 3646 2.969628 TTTGTTTCCCATGCAACGTT 57.030 40.000 0.00 0.00 0.00 3.99
3508 3647 2.969628 TTTTGTTTCCCATGCAACGT 57.030 40.000 0.00 0.00 0.00 3.99
3526 3665 4.394729 TCTTGGTGAGCGTAGGAATTTTT 58.605 39.130 0.00 0.00 0.00 1.94
3527 3666 4.015872 TCTTGGTGAGCGTAGGAATTTT 57.984 40.909 0.00 0.00 0.00 1.82
3528 3667 3.695830 TCTTGGTGAGCGTAGGAATTT 57.304 42.857 0.00 0.00 0.00 1.82
3529 3668 3.197766 TGATCTTGGTGAGCGTAGGAATT 59.802 43.478 0.00 0.00 32.98 2.17
3530 3669 2.766263 TGATCTTGGTGAGCGTAGGAAT 59.234 45.455 0.00 0.00 32.98 3.01
3531 3670 2.176045 TGATCTTGGTGAGCGTAGGAA 58.824 47.619 0.00 0.00 32.98 3.36
3532 3671 1.847328 TGATCTTGGTGAGCGTAGGA 58.153 50.000 0.00 0.00 32.98 2.94
3533 3672 2.672961 TTGATCTTGGTGAGCGTAGG 57.327 50.000 0.00 0.00 32.98 3.18
3534 3673 5.235186 CCTAAATTGATCTTGGTGAGCGTAG 59.765 44.000 0.00 0.00 32.98 3.51
3535 3674 5.105106 TCCTAAATTGATCTTGGTGAGCGTA 60.105 40.000 0.00 0.00 32.98 4.42
3536 3675 3.941483 CCTAAATTGATCTTGGTGAGCGT 59.059 43.478 0.00 0.00 32.98 5.07
3537 3676 4.191544 TCCTAAATTGATCTTGGTGAGCG 58.808 43.478 0.00 0.00 32.98 5.03
3538 3677 5.431765 TCTCCTAAATTGATCTTGGTGAGC 58.568 41.667 0.00 0.00 0.00 4.26
3539 3678 7.226325 GTCATCTCCTAAATTGATCTTGGTGAG 59.774 40.741 0.00 0.00 0.00 3.51
3540 3679 7.050377 GTCATCTCCTAAATTGATCTTGGTGA 58.950 38.462 0.00 0.00 0.00 4.02
3541 3680 6.261826 GGTCATCTCCTAAATTGATCTTGGTG 59.738 42.308 0.00 0.00 0.00 4.17
3542 3681 6.069440 TGGTCATCTCCTAAATTGATCTTGGT 60.069 38.462 0.00 0.00 0.00 3.67
3543 3682 6.359804 TGGTCATCTCCTAAATTGATCTTGG 58.640 40.000 0.00 0.00 0.00 3.61
3544 3683 7.937942 AGATGGTCATCTCCTAAATTGATCTTG 59.062 37.037 7.59 0.00 44.37 3.02
3545 3684 8.043429 AGATGGTCATCTCCTAAATTGATCTT 57.957 34.615 7.59 0.00 44.37 2.40
3546 3685 7.630005 AGATGGTCATCTCCTAAATTGATCT 57.370 36.000 7.59 0.00 44.37 2.75
3547 3686 7.543868 CGTAGATGGTCATCTCCTAAATTGATC 59.456 40.741 15.80 0.00 44.37 2.92
3548 3687 7.233553 TCGTAGATGGTCATCTCCTAAATTGAT 59.766 37.037 15.80 0.00 44.37 2.57
3549 3688 6.549736 TCGTAGATGGTCATCTCCTAAATTGA 59.450 38.462 15.80 3.17 44.37 2.57
3550 3689 6.749139 TCGTAGATGGTCATCTCCTAAATTG 58.251 40.000 15.80 1.24 44.37 2.32
3551 3690 6.778069 TCTCGTAGATGGTCATCTCCTAAATT 59.222 38.462 15.80 0.00 44.37 1.82
3552 3691 6.307776 TCTCGTAGATGGTCATCTCCTAAAT 58.692 40.000 15.80 0.00 44.37 1.40
3553 3692 5.691896 TCTCGTAGATGGTCATCTCCTAAA 58.308 41.667 15.80 0.00 44.37 1.85
3554 3693 5.306114 TCTCGTAGATGGTCATCTCCTAA 57.694 43.478 15.80 0.00 44.37 2.69
3555 3694 4.263112 CCTCTCGTAGATGGTCATCTCCTA 60.263 50.000 15.80 0.00 44.37 2.94
3556 3695 3.497763 CCTCTCGTAGATGGTCATCTCCT 60.498 52.174 15.80 0.00 44.37 3.69
3557 3696 2.817258 CCTCTCGTAGATGGTCATCTCC 59.183 54.545 15.80 5.25 44.37 3.71
3558 3697 3.745799 TCCTCTCGTAGATGGTCATCTC 58.254 50.000 15.80 8.08 44.37 2.75
3560 3699 3.745799 TCTCCTCTCGTAGATGGTCATC 58.254 50.000 2.92 2.92 38.09 2.92
3561 3700 3.392947 TCTCTCCTCTCGTAGATGGTCAT 59.607 47.826 0.00 0.00 33.89 3.06
3562 3701 2.772515 TCTCTCCTCTCGTAGATGGTCA 59.227 50.000 0.00 0.00 33.89 4.02
3563 3702 3.478857 TCTCTCCTCTCGTAGATGGTC 57.521 52.381 0.00 0.00 33.89 4.02
3564 3703 4.141287 CAATCTCTCCTCTCGTAGATGGT 58.859 47.826 0.00 0.00 33.89 3.55
3565 3704 3.505680 CCAATCTCTCCTCTCGTAGATGG 59.494 52.174 0.00 0.00 33.89 3.51
3566 3705 4.393834 TCCAATCTCTCCTCTCGTAGATG 58.606 47.826 0.00 0.00 33.89 2.90
3567 3706 4.715534 TCCAATCTCTCCTCTCGTAGAT 57.284 45.455 0.00 0.00 33.89 1.98
3568 3707 4.349636 AGATCCAATCTCTCCTCTCGTAGA 59.650 45.833 0.00 0.00 33.42 2.59
3569 3708 4.651778 AGATCCAATCTCTCCTCTCGTAG 58.348 47.826 0.00 0.00 33.42 3.51
3570 3709 4.715534 AGATCCAATCTCTCCTCTCGTA 57.284 45.455 0.00 0.00 33.42 3.43
3571 3710 3.593442 AGATCCAATCTCTCCTCTCGT 57.407 47.619 0.00 0.00 33.42 4.18
3572 3711 4.393834 TGTAGATCCAATCTCTCCTCTCG 58.606 47.826 0.00 0.00 40.76 4.04
3573 3712 6.377146 GGTATGTAGATCCAATCTCTCCTCTC 59.623 46.154 0.00 0.00 40.76 3.20
3574 3713 6.252995 GGTATGTAGATCCAATCTCTCCTCT 58.747 44.000 0.00 0.00 40.76 3.69
3575 3714 5.420739 GGGTATGTAGATCCAATCTCTCCTC 59.579 48.000 0.00 0.00 40.76 3.71
3576 3715 5.077159 AGGGTATGTAGATCCAATCTCTCCT 59.923 44.000 0.00 0.00 40.76 3.69
3577 3716 5.337788 AGGGTATGTAGATCCAATCTCTCC 58.662 45.833 0.00 0.00 40.76 3.71
3578 3717 6.268847 ACAAGGGTATGTAGATCCAATCTCTC 59.731 42.308 0.00 0.00 40.76 3.20
3579 3718 6.146760 ACAAGGGTATGTAGATCCAATCTCT 58.853 40.000 0.00 0.00 40.76 3.10
3580 3719 6.426646 ACAAGGGTATGTAGATCCAATCTC 57.573 41.667 0.00 0.00 40.76 2.75
3591 3730 5.048224 GCTTAGCGATCTACAAGGGTATGTA 60.048 44.000 0.00 0.00 34.75 2.29
3592 3731 4.262079 GCTTAGCGATCTACAAGGGTATGT 60.262 45.833 0.00 0.00 37.32 2.29
3593 3732 4.238514 GCTTAGCGATCTACAAGGGTATG 58.761 47.826 0.00 0.00 0.00 2.39
3594 3733 4.522722 GCTTAGCGATCTACAAGGGTAT 57.477 45.455 0.00 0.00 0.00 2.73
3596 3735 2.892784 GCTTAGCGATCTACAAGGGT 57.107 50.000 0.00 0.00 0.00 4.34
3609 3748 4.343609 GTTTCTTAATGCTTCCGCTTAGC 58.656 43.478 0.00 0.00 39.10 3.09
3610 3749 4.578601 CGTTTCTTAATGCTTCCGCTTAG 58.421 43.478 0.00 0.00 36.97 2.18
3611 3750 3.181514 GCGTTTCTTAATGCTTCCGCTTA 60.182 43.478 0.00 0.00 41.95 3.09
3612 3751 2.414161 GCGTTTCTTAATGCTTCCGCTT 60.414 45.455 0.00 0.00 41.95 4.68
3613 3752 1.130561 GCGTTTCTTAATGCTTCCGCT 59.869 47.619 0.00 0.00 41.95 5.52
3614 3753 1.535088 GCGTTTCTTAATGCTTCCGC 58.465 50.000 0.00 0.00 41.95 5.54
3615 3754 1.529010 CCGCGTTTCTTAATGCTTCCG 60.529 52.381 4.92 0.00 42.82 4.30
3616 3755 1.467342 ACCGCGTTTCTTAATGCTTCC 59.533 47.619 4.92 0.00 42.82 3.46
3617 3756 2.894307 ACCGCGTTTCTTAATGCTTC 57.106 45.000 4.92 0.00 42.82 3.86
3618 3757 2.550606 TCAACCGCGTTTCTTAATGCTT 59.449 40.909 4.92 0.00 42.82 3.91
3619 3758 2.147958 TCAACCGCGTTTCTTAATGCT 58.852 42.857 4.92 0.00 42.82 3.79
3620 3759 2.604969 TCAACCGCGTTTCTTAATGC 57.395 45.000 4.92 0.00 41.81 3.56
3621 3760 4.078363 ACATCAACCGCGTTTCTTAATG 57.922 40.909 4.92 0.90 0.00 1.90
3622 3761 4.933400 ACTACATCAACCGCGTTTCTTAAT 59.067 37.500 4.92 0.00 0.00 1.40
3623 3762 4.309099 ACTACATCAACCGCGTTTCTTAA 58.691 39.130 4.92 0.00 0.00 1.85
3624 3763 3.916761 ACTACATCAACCGCGTTTCTTA 58.083 40.909 4.92 0.00 0.00 2.10
3625 3764 2.735134 GACTACATCAACCGCGTTTCTT 59.265 45.455 4.92 0.00 0.00 2.52
3626 3765 2.334838 GACTACATCAACCGCGTTTCT 58.665 47.619 4.92 0.00 0.00 2.52
3627 3766 1.058695 CGACTACATCAACCGCGTTTC 59.941 52.381 4.92 0.00 0.00 2.78
3628 3767 1.065358 CGACTACATCAACCGCGTTT 58.935 50.000 4.92 0.00 0.00 3.60
3629 3768 0.734942 CCGACTACATCAACCGCGTT 60.735 55.000 4.92 0.00 0.00 4.84
3630 3769 1.153901 CCGACTACATCAACCGCGT 60.154 57.895 4.92 0.00 0.00 6.01
3631 3770 1.138036 TCCGACTACATCAACCGCG 59.862 57.895 0.00 0.00 0.00 6.46
3632 3771 1.138047 CGTCCGACTACATCAACCGC 61.138 60.000 0.00 0.00 0.00 5.68
3633 3772 0.169672 ACGTCCGACTACATCAACCG 59.830 55.000 0.00 0.00 0.00 4.44
3634 3773 1.471684 AGACGTCCGACTACATCAACC 59.528 52.381 13.01 0.00 0.00 3.77
3635 3774 2.915738 AGACGTCCGACTACATCAAC 57.084 50.000 13.01 0.00 0.00 3.18
3636 3775 2.159612 CGAAGACGTCCGACTACATCAA 60.160 50.000 13.01 0.00 34.56 2.57
3637 3776 1.395954 CGAAGACGTCCGACTACATCA 59.604 52.381 13.01 0.00 34.56 3.07
3638 3777 1.855223 GCGAAGACGTCCGACTACATC 60.855 57.143 16.80 1.43 41.98 3.06
3639 3778 0.098376 GCGAAGACGTCCGACTACAT 59.902 55.000 16.80 0.00 41.98 2.29
3640 3779 1.499056 GCGAAGACGTCCGACTACA 59.501 57.895 16.80 0.00 41.98 2.74
3641 3780 1.579626 CGCGAAGACGTCCGACTAC 60.580 63.158 16.80 0.28 41.98 2.73
3642 3781 1.086067 ATCGCGAAGACGTCCGACTA 61.086 55.000 15.24 3.01 41.98 2.59
3643 3782 2.307137 GATCGCGAAGACGTCCGACT 62.307 60.000 15.24 7.29 41.98 4.18
3644 3783 1.933519 GATCGCGAAGACGTCCGAC 60.934 63.158 15.24 6.33 41.98 4.79
3645 3784 2.402388 GATCGCGAAGACGTCCGA 59.598 61.111 15.24 16.01 41.98 4.55
3646 3785 2.651232 GGATCGCGAAGACGTCCG 60.651 66.667 15.24 10.99 41.98 4.79
3647 3786 0.527817 ATTGGATCGCGAAGACGTCC 60.528 55.000 15.24 16.28 41.98 4.79
3648 3787 0.847035 GATTGGATCGCGAAGACGTC 59.153 55.000 15.24 7.70 41.98 4.34
3649 3788 0.172578 TGATTGGATCGCGAAGACGT 59.827 50.000 15.24 0.00 41.98 4.34
3650 3789 0.572590 GTGATTGGATCGCGAAGACG 59.427 55.000 15.24 0.00 42.93 4.18
3657 3796 0.597637 ACGGATCGTGATTGGATCGC 60.598 55.000 0.00 0.00 40.93 4.58
3658 3797 1.409412 GACGGATCGTGATTGGATCG 58.591 55.000 0.00 0.00 41.37 3.69
3659 3798 1.605712 GGGACGGATCGTGATTGGATC 60.606 57.143 0.00 0.00 41.37 3.36
3660 3799 0.393077 GGGACGGATCGTGATTGGAT 59.607 55.000 0.00 0.00 41.37 3.41
3661 3800 0.973496 TGGGACGGATCGTGATTGGA 60.973 55.000 0.00 0.00 41.37 3.53
3662 3801 0.810031 GTGGGACGGATCGTGATTGG 60.810 60.000 0.00 0.00 41.37 3.16
3663 3802 1.145759 CGTGGGACGGATCGTGATTG 61.146 60.000 0.00 0.00 41.37 2.67
3664 3803 1.141019 CGTGGGACGGATCGTGATT 59.859 57.895 0.00 0.00 41.37 2.57
3665 3804 1.317431 TTCGTGGGACGGATCGTGAT 61.317 55.000 0.00 0.00 41.37 3.06
3666 3805 1.972752 TTCGTGGGACGGATCGTGA 60.973 57.895 0.00 0.00 41.37 4.35
3667 3806 1.804326 GTTCGTGGGACGGATCGTG 60.804 63.158 0.00 0.00 41.37 4.35
3668 3807 1.930908 GAGTTCGTGGGACGGATCGT 61.931 60.000 0.00 0.00 45.10 3.73
3669 3808 1.226603 GAGTTCGTGGGACGGATCG 60.227 63.158 0.00 0.00 42.81 3.69
3670 3809 1.141234 GGAGTTCGTGGGACGGATC 59.859 63.158 0.00 0.00 42.81 3.36
3671 3810 2.707849 CGGAGTTCGTGGGACGGAT 61.708 63.158 0.00 0.00 42.81 4.18
3672 3811 3.367743 CGGAGTTCGTGGGACGGA 61.368 66.667 0.00 0.00 42.81 4.69
3673 3812 2.609183 GATCGGAGTTCGTGGGACGG 62.609 65.000 0.00 0.00 42.81 4.79
3674 3813 1.226603 GATCGGAGTTCGTGGGACG 60.227 63.158 0.00 0.00 44.19 4.79
3675 3814 1.226603 CGATCGGAGTTCGTGGGAC 60.227 63.158 7.38 0.00 40.32 4.46
3676 3815 0.961857 TTCGATCGGAGTTCGTGGGA 60.962 55.000 16.41 0.00 40.32 4.37
3677 3816 0.525668 CTTCGATCGGAGTTCGTGGG 60.526 60.000 15.67 0.00 40.32 4.61
3678 3817 0.170561 ACTTCGATCGGAGTTCGTGG 59.829 55.000 23.58 0.00 40.32 4.94
3679 3818 1.260206 CACTTCGATCGGAGTTCGTG 58.740 55.000 26.53 12.49 40.32 4.35
3680 3819 0.456312 GCACTTCGATCGGAGTTCGT 60.456 55.000 26.53 2.93 40.32 3.85
3681 3820 1.140407 GGCACTTCGATCGGAGTTCG 61.140 60.000 26.53 17.02 40.90 3.95
3682 3821 0.108804 TGGCACTTCGATCGGAGTTC 60.109 55.000 26.53 21.44 0.00 3.01
3683 3822 0.320374 TTGGCACTTCGATCGGAGTT 59.680 50.000 26.53 9.39 0.00 3.01
3684 3823 0.320374 TTTGGCACTTCGATCGGAGT 59.680 50.000 23.58 23.58 0.00 3.85
3685 3824 1.002366 CTTTGGCACTTCGATCGGAG 58.998 55.000 22.06 22.06 0.00 4.63
3686 3825 0.391130 CCTTTGGCACTTCGATCGGA 60.391 55.000 16.41 5.34 0.00 4.55
3687 3826 0.391130 TCCTTTGGCACTTCGATCGG 60.391 55.000 16.41 2.12 0.00 4.18
3688 3827 0.721718 GTCCTTTGGCACTTCGATCG 59.278 55.000 9.36 9.36 0.00 3.69
3689 3828 0.721718 CGTCCTTTGGCACTTCGATC 59.278 55.000 0.00 0.00 0.00 3.69
3690 3829 0.673644 CCGTCCTTTGGCACTTCGAT 60.674 55.000 0.00 0.00 0.00 3.59
3691 3830 1.301401 CCGTCCTTTGGCACTTCGA 60.301 57.895 0.00 0.00 0.00 3.71
3692 3831 3.253955 CCGTCCTTTGGCACTTCG 58.746 61.111 0.00 0.00 0.00 3.79
3699 3838 2.325082 CGAAGGTGCCGTCCTTTGG 61.325 63.158 10.18 2.70 46.38 3.28
3700 3839 2.966309 GCGAAGGTGCCGTCCTTTG 61.966 63.158 12.52 12.52 46.38 2.77
3701 3840 2.668550 GCGAAGGTGCCGTCCTTT 60.669 61.111 6.43 0.00 46.38 3.11
3705 3844 3.774702 GAACGCGAAGGTGCCGTC 61.775 66.667 15.93 0.00 0.00 4.79
3706 3845 4.595538 TGAACGCGAAGGTGCCGT 62.596 61.111 15.93 0.00 0.00 5.68
3707 3846 3.342627 TTGAACGCGAAGGTGCCG 61.343 61.111 15.93 0.00 0.00 5.69
3708 3847 2.251371 GTTGAACGCGAAGGTGCC 59.749 61.111 15.93 0.00 0.00 5.01
3709 3848 1.368850 GTGTTGAACGCGAAGGTGC 60.369 57.895 15.93 0.00 0.00 5.01
3710 3849 0.315869 GTGTGTTGAACGCGAAGGTG 60.316 55.000 15.93 0.00 0.00 4.00
3711 3850 2.011453 GTGTGTTGAACGCGAAGGT 58.989 52.632 15.93 0.00 0.00 3.50
3712 3851 4.893241 GTGTGTTGAACGCGAAGG 57.107 55.556 15.93 0.00 0.00 3.46
3717 3856 1.199859 CCGTACGTGTGTTGAACGC 59.800 57.895 15.21 1.20 44.80 4.84
3718 3857 0.922717 AACCGTACGTGTGTTGAACG 59.077 50.000 15.21 0.00 46.32 3.95
3719 3858 2.348059 TCAAACCGTACGTGTGTTGAAC 59.652 45.455 15.21 0.00 30.89 3.18
3720 3859 2.614779 TCAAACCGTACGTGTGTTGAA 58.385 42.857 15.21 1.14 30.89 2.69
3721 3860 2.290531 TCAAACCGTACGTGTGTTGA 57.709 45.000 15.21 17.43 30.89 3.18
3722 3861 2.540516 TCATCAAACCGTACGTGTGTTG 59.459 45.455 15.21 15.88 32.60 3.33
3723 3862 2.540931 GTCATCAAACCGTACGTGTGTT 59.459 45.455 15.21 8.50 30.89 3.32
3724 3863 2.129607 GTCATCAAACCGTACGTGTGT 58.870 47.619 15.21 4.14 30.89 3.72
3725 3864 1.123576 CGTCATCAAACCGTACGTGTG 59.876 52.381 15.21 8.97 0.00 3.82
3726 3865 1.411394 CGTCATCAAACCGTACGTGT 58.589 50.000 15.21 8.99 0.00 4.49
3727 3866 0.092351 GCGTCATCAAACCGTACGTG 59.908 55.000 15.21 6.26 36.03 4.49
3728 3867 1.010419 GGCGTCATCAAACCGTACGT 61.010 55.000 15.21 0.00 36.03 3.57
3729 3868 0.734942 AGGCGTCATCAAACCGTACG 60.735 55.000 8.69 8.69 36.67 3.67
3730 3869 1.392510 GAAGGCGTCATCAAACCGTAC 59.607 52.381 0.00 0.00 0.00 3.67
3731 3870 1.001068 TGAAGGCGTCATCAAACCGTA 59.999 47.619 0.00 0.00 0.00 4.02
3732 3871 0.250124 TGAAGGCGTCATCAAACCGT 60.250 50.000 0.00 0.00 0.00 4.83
3733 3872 0.165944 GTGAAGGCGTCATCAAACCG 59.834 55.000 6.37 0.00 38.90 4.44
3734 3873 0.521735 GGTGAAGGCGTCATCAAACC 59.478 55.000 8.88 0.12 37.32 3.27
3735 3874 1.464997 GAGGTGAAGGCGTCATCAAAC 59.535 52.381 15.95 3.56 40.16 2.93
3736 3875 1.610624 GGAGGTGAAGGCGTCATCAAA 60.611 52.381 15.95 0.00 40.16 2.69
3737 3876 0.036388 GGAGGTGAAGGCGTCATCAA 60.036 55.000 15.95 0.00 40.16 2.57
3738 3877 0.904865 AGGAGGTGAAGGCGTCATCA 60.905 55.000 15.95 0.00 40.16 3.07
3739 3878 0.179097 GAGGAGGTGAAGGCGTCATC 60.179 60.000 6.37 5.91 38.90 2.92
3740 3879 1.901085 GAGGAGGTGAAGGCGTCAT 59.099 57.895 6.37 0.00 38.90 3.06
3741 3880 2.636412 CGAGGAGGTGAAGGCGTCA 61.636 63.158 0.00 0.00 0.00 4.35
3742 3881 1.668101 ATCGAGGAGGTGAAGGCGTC 61.668 60.000 0.00 0.00 0.00 5.19
3743 3882 1.668101 GATCGAGGAGGTGAAGGCGT 61.668 60.000 0.00 0.00 0.00 5.68
3744 3883 1.066587 GATCGAGGAGGTGAAGGCG 59.933 63.158 0.00 0.00 0.00 5.52
3745 3884 1.611491 CTAGATCGAGGAGGTGAAGGC 59.389 57.143 0.00 0.00 0.00 4.35
3746 3885 1.611491 GCTAGATCGAGGAGGTGAAGG 59.389 57.143 4.92 0.00 0.00 3.46
3747 3886 1.265635 CGCTAGATCGAGGAGGTGAAG 59.734 57.143 4.92 0.00 0.00 3.02
3748 3887 1.134189 TCGCTAGATCGAGGAGGTGAA 60.134 52.381 4.92 0.00 34.09 3.18
3749 3888 0.468648 TCGCTAGATCGAGGAGGTGA 59.531 55.000 4.92 0.00 34.09 4.02
3750 3889 3.008141 TCGCTAGATCGAGGAGGTG 57.992 57.895 4.92 0.00 34.09 4.00
3757 3896 0.885150 ACCATCGCTCGCTAGATCGA 60.885 55.000 0.00 0.00 46.84 3.59
3758 3897 0.727457 CACCATCGCTCGCTAGATCG 60.727 60.000 0.00 0.00 37.35 3.69
3759 3898 0.593618 TCACCATCGCTCGCTAGATC 59.406 55.000 0.00 0.00 0.00 2.75
3760 3899 1.000827 CTTCACCATCGCTCGCTAGAT 60.001 52.381 0.00 0.00 0.00 1.98
3761 3900 0.382158 CTTCACCATCGCTCGCTAGA 59.618 55.000 0.00 0.00 0.00 2.43
3762 3901 0.101399 ACTTCACCATCGCTCGCTAG 59.899 55.000 0.00 0.00 0.00 3.42
3763 3902 1.333931 CTACTTCACCATCGCTCGCTA 59.666 52.381 0.00 0.00 0.00 4.26
3764 3903 0.101399 CTACTTCACCATCGCTCGCT 59.899 55.000 0.00 0.00 0.00 4.93
3765 3904 0.179134 ACTACTTCACCATCGCTCGC 60.179 55.000 0.00 0.00 0.00 5.03
3766 3905 2.855187 GCTACTACTTCACCATCGCTCG 60.855 54.545 0.00 0.00 0.00 5.03
3767 3906 2.359531 AGCTACTACTTCACCATCGCTC 59.640 50.000 0.00 0.00 0.00 5.03
3768 3907 2.359531 GAGCTACTACTTCACCATCGCT 59.640 50.000 0.00 0.00 0.00 4.93
3769 3908 2.733517 GAGCTACTACTTCACCATCGC 58.266 52.381 0.00 0.00 0.00 4.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.