Multiple sequence alignment - TraesCS4A01G132200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G132200 chr4A 100.000 5350 0 0 1 5350 177611143 177616492 0.000000e+00 9880
1 TraesCS4A01G132200 chr4A 95.935 369 11 2 2734 3102 332644196 332644560 3.570000e-166 595
2 TraesCS4A01G132200 chr4A 97.260 146 4 0 203 348 616975688 616975543 1.150000e-61 248
3 TraesCS4A01G132200 chr4A 95.862 145 5 1 662 805 616962760 616962616 3.220000e-57 233
4 TraesCS4A01G132200 chr4A 84.615 156 15 6 656 805 630033060 630033212 4.320000e-31 147
5 TraesCS4A01G132200 chr4A 92.405 79 6 0 806 884 9372938 9372860 4.380000e-21 113
6 TraesCS4A01G132200 chr4D 90.781 1421 93 24 3103 4506 302402528 302401129 0.000000e+00 1864
7 TraesCS4A01G132200 chr4D 97.481 794 19 1 998 1790 302403489 302402696 0.000000e+00 1354
8 TraesCS4A01G132200 chr4D 90.656 610 39 8 4745 5350 302401116 302400521 0.000000e+00 795
9 TraesCS4A01G132200 chr4D 96.477 369 9 2 2734 3102 417675412 417675048 1.650000e-169 606
10 TraesCS4A01G132200 chr4D 95.957 371 10 3 2733 3102 417678046 417677680 9.920000e-167 597
11 TraesCS4A01G132200 chr4D 95.935 369 11 2 2734 3102 403410243 403409879 3.570000e-166 595
12 TraesCS4A01G132200 chr4D 92.241 232 17 1 4513 4744 380869581 380869811 1.440000e-85 327
13 TraesCS4A01G132200 chr4D 79.872 313 23 23 29 306 48050722 48051029 5.470000e-45 193
14 TraesCS4A01G132200 chr4D 92.857 126 9 0 1823 1948 409444351 409444476 3.290000e-42 183
15 TraesCS4A01G132200 chr4D 92.661 109 3 3 890 993 302403630 302403522 9.280000e-33 152
16 TraesCS4A01G132200 chr4D 94.118 68 3 1 2666 2733 302402590 302402524 9.480000e-18 102
17 TraesCS4A01G132200 chr4B 93.910 1133 39 7 922 2026 377381047 377379917 0.000000e+00 1683
18 TraesCS4A01G132200 chr4B 88.856 1364 81 27 3169 4513 377378527 377377216 0.000000e+00 1611
19 TraesCS4A01G132200 chr4B 94.805 385 19 1 4967 5350 377376753 377376369 2.760000e-167 599
20 TraesCS4A01G132200 chr4B 94.737 228 10 1 4745 4970 377377216 377376989 2.370000e-93 353
21 TraesCS4A01G132200 chr4B 93.548 124 7 1 1823 1945 182765953 182766076 3.290000e-42 183
22 TraesCS4A01G132200 chr4B 97.436 78 2 0 3103 3180 377379836 377379759 3.360000e-27 134
23 TraesCS4A01G132200 chr4B 96.053 76 3 0 2658 2733 377379907 377379832 2.020000e-24 124
24 TraesCS4A01G132200 chr3A 97.401 808 18 2 1 805 674491585 674490778 0.000000e+00 1373
25 TraesCS4A01G132200 chr3A 88.281 128 12 2 2534 2658 699996105 699996232 3.340000e-32 150
26 TraesCS4A01G132200 chr2A 96.173 810 26 4 1 806 748065966 748066774 0.000000e+00 1319
27 TraesCS4A01G132200 chr2A 95.196 791 23 6 27 805 39948878 39948091 0.000000e+00 1236
28 TraesCS4A01G132200 chr2A 94.943 791 28 5 27 805 98910412 98911202 0.000000e+00 1229
29 TraesCS4A01G132200 chr2A 94.704 793 28 7 27 807 605178458 605179248 0.000000e+00 1219
30 TraesCS4A01G132200 chr2A 94.690 791 26 8 27 805 31700205 31699419 0.000000e+00 1214
31 TraesCS4A01G132200 chr2A 96.477 369 9 2 2734 3102 526341991 526341627 1.650000e-169 606
32 TraesCS4A01G132200 chr2A 95.710 373 10 3 2734 3104 350705457 350705825 3.570000e-166 595
33 TraesCS4A01G132200 chr2A 94.872 78 4 0 806 883 655890965 655891042 7.280000e-24 122
34 TraesCS4A01G132200 chr7A 94.823 792 26 9 27 805 554399122 554399911 0.000000e+00 1221
35 TraesCS4A01G132200 chr7A 92.340 235 18 0 4513 4747 437407024 437406790 8.590000e-88 335
36 TraesCS4A01G132200 chr7D 96.000 375 10 3 2734 3108 20410407 20410038 5.930000e-169 604
37 TraesCS4A01G132200 chr7D 95.687 371 12 2 2734 3104 610701444 610701810 1.280000e-165 593
38 TraesCS4A01G132200 chr7D 91.489 235 20 0 4513 4747 208131042 208130808 1.860000e-84 324
39 TraesCS4A01G132200 chr7D 92.511 227 16 1 4513 4739 432623324 432623549 1.860000e-84 324
40 TraesCS4A01G132200 chr7D 91.379 232 20 0 4513 4744 50134933 50134702 8.650000e-83 318
41 TraesCS4A01G132200 chr7D 95.041 121 6 0 1828 1948 236827381 236827501 1.970000e-44 191
42 TraesCS4A01G132200 chr7D 92.424 132 10 0 1823 1954 175941817 175941686 7.070000e-44 189
43 TraesCS4A01G132200 chr7D 92.500 80 6 0 806 885 621758287 621758208 1.220000e-21 115
44 TraesCS4A01G132200 chr5A 96.206 369 9 3 2734 3102 51553518 51553881 2.760000e-167 599
45 TraesCS4A01G132200 chr1D 78.641 618 64 30 27 615 164427263 164426685 1.100000e-91 348
46 TraesCS4A01G132200 chr1D 88.281 128 12 2 2533 2657 10128733 10128606 3.340000e-32 150
47 TraesCS4A01G132200 chr1D 94.595 74 4 0 806 879 301251388 301251461 1.220000e-21 115
48 TraesCS4A01G132200 chr1D 94.595 74 4 0 806 879 404992642 404992715 1.220000e-21 115
49 TraesCS4A01G132200 chr6A 92.704 233 17 0 4513 4745 581809491 581809259 2.390000e-88 337
50 TraesCS4A01G132200 chr6D 92.982 228 16 0 4517 4744 28681542 28681315 3.090000e-87 333
51 TraesCS4A01G132200 chr6D 92.857 126 9 0 1823 1948 267532809 267532934 3.290000e-42 183
52 TraesCS4A01G132200 chr6D 90.000 130 10 2 2533 2659 51198879 51199008 1.190000e-36 165
53 TraesCS4A01G132200 chr6D 86.822 129 11 2 2533 2661 260033600 260033722 7.230000e-29 139
54 TraesCS4A01G132200 chr6D 94.595 74 4 0 806 879 77679031 77678958 1.220000e-21 115
55 TraesCS4A01G132200 chr3D 92.070 227 18 0 4513 4739 379670576 379670802 2.400000e-83 320
56 TraesCS4A01G132200 chr3D 94.595 74 4 0 806 879 8466679 8466606 1.220000e-21 115
57 TraesCS4A01G132200 chr2B 91.739 230 19 0 4513 4742 148733788 148733559 2.400000e-83 320
58 TraesCS4A01G132200 chr7B 84.946 279 33 8 2051 2322 150070100 150069824 1.900000e-69 274
59 TraesCS4A01G132200 chr7B 84.783 276 37 5 2052 2322 531640699 531640424 6.830000e-69 272
60 TraesCS4A01G132200 chr7B 86.614 127 14 2 2533 2657 150069467 150069342 2.600000e-28 137
61 TraesCS4A01G132200 chr5D 82.759 232 35 5 2074 2301 547547436 547547666 9.090000e-48 202
62 TraesCS4A01G132200 chr5D 94.309 123 7 0 1826 1948 360541856 360541978 7.070000e-44 189
63 TraesCS4A01G132200 chr5D 89.313 131 11 2 2533 2660 438373143 438373013 1.540000e-35 161
64 TraesCS4A01G132200 chr5D 89.844 128 10 2 2533 2657 507172289 507172416 1.540000e-35 161
65 TraesCS4A01G132200 chr2D 93.651 126 8 0 1823 1948 388833659 388833784 7.070000e-44 189
66 TraesCS4A01G132200 chr1B 93.548 124 7 1 1824 1947 237009317 237009195 3.290000e-42 183
67 TraesCS4A01G132200 chr1B 87.500 128 13 2 2533 2657 114467530 114467403 1.550000e-30 145
68 TraesCS4A01G132200 chr1A 78.746 287 46 6 2051 2322 21416246 21415960 1.530000e-40 178
69 TraesCS4A01G132200 chr1A 95.946 74 3 0 806 879 391242821 391242748 2.620000e-23 121
70 TraesCS4A01G132200 chr5B 86.400 125 12 1 2533 2657 235446822 235446941 1.210000e-26 132
71 TraesCS4A01G132200 chrUn 94.595 74 4 0 806 879 143923274 143923347 1.220000e-21 115


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G132200 chr4A 177611143 177616492 5349 False 9880.000000 9880 100.0000 1 5350 1 chr4A.!!$F1 5349
1 TraesCS4A01G132200 chr4D 302400521 302403630 3109 True 853.400000 1864 93.1394 890 5350 5 chr4D.!!$R2 4460
2 TraesCS4A01G132200 chr4D 417675048 417678046 2998 True 601.500000 606 96.2170 2733 3102 2 chr4D.!!$R3 369
3 TraesCS4A01G132200 chr4B 377376369 377381047 4678 True 750.666667 1683 94.2995 922 5350 6 chr4B.!!$R1 4428
4 TraesCS4A01G132200 chr3A 674490778 674491585 807 True 1373.000000 1373 97.4010 1 805 1 chr3A.!!$R1 804
5 TraesCS4A01G132200 chr2A 748065966 748066774 808 False 1319.000000 1319 96.1730 1 806 1 chr2A.!!$F5 805
6 TraesCS4A01G132200 chr2A 39948091 39948878 787 True 1236.000000 1236 95.1960 27 805 1 chr2A.!!$R2 778
7 TraesCS4A01G132200 chr2A 98910412 98911202 790 False 1229.000000 1229 94.9430 27 805 1 chr2A.!!$F1 778
8 TraesCS4A01G132200 chr2A 605178458 605179248 790 False 1219.000000 1219 94.7040 27 807 1 chr2A.!!$F3 780
9 TraesCS4A01G132200 chr2A 31699419 31700205 786 True 1214.000000 1214 94.6900 27 805 1 chr2A.!!$R1 778
10 TraesCS4A01G132200 chr7A 554399122 554399911 789 False 1221.000000 1221 94.8230 27 805 1 chr7A.!!$F1 778
11 TraesCS4A01G132200 chr1D 164426685 164427263 578 True 348.000000 348 78.6410 27 615 1 chr1D.!!$R2 588
12 TraesCS4A01G132200 chr7B 150069342 150070100 758 True 205.500000 274 85.7800 2051 2657 2 chr7B.!!$R2 606

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
994 1044 0.320374 CCCTGAAGTTCACTGGCGTA 59.680 55.0 0.08 0.0 0.00 4.42 F
2044 2143 0.034337 CTTGCCCAATGCCCATATGC 59.966 55.0 0.00 0.0 40.16 3.14 F
2091 2191 0.185175 ATTTAAGGTGGGGCGGATCC 59.815 55.0 0.00 0.0 0.00 3.36 F
2468 2707 0.250684 TGATTGAACGAAGCCCAGCA 60.251 50.0 0.00 0.0 0.00 4.41 F
2504 2758 0.253610 ATGGGCCGAAATAACGTGGA 59.746 50.0 0.00 0.0 0.00 4.02 F
2506 2760 0.392060 GGGCCGAAATAACGTGGACT 60.392 55.0 0.00 0.0 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2427 2666 0.107456 CCCATCCCGATCACTCAAGG 59.893 60.000 0.00 0.00 0.00 3.61 R
3760 7937 0.039256 CAAAACACCGGGATGCACAG 60.039 55.000 6.32 0.00 0.00 3.66 R
3765 7942 2.295909 ACATCAACAAAACACCGGGATG 59.704 45.455 6.32 8.19 37.33 3.51 R
4193 8397 1.076332 AGAAATCTTACACCGTGCGC 58.924 50.000 0.00 0.00 0.00 6.09 R
4246 8450 3.002965 TCACGGACTACATACACATAGCG 59.997 47.826 0.00 0.00 0.00 4.26 R
4425 8634 3.054802 CCTCATAGACTGGCAGTTCCTTT 60.055 47.826 22.98 7.51 35.26 3.11 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
110 111 3.521560 CTTCTTAGGCAACGTAGCATGA 58.478 45.455 0.00 0.00 46.39 3.07
522 562 3.168628 GACGAAAGACGAACCGACA 57.831 52.632 0.00 0.00 45.77 4.35
657 700 8.431910 TTTGACTTTCTACCTAGTTACCTGAT 57.568 34.615 0.00 0.00 0.00 2.90
687 730 7.603404 CCAAGCACATCTCATTTATTTTTCCAA 59.397 33.333 0.00 0.00 0.00 3.53
816 861 3.001514 GCCCTGGAATGGCTGAGA 58.998 61.111 0.00 0.00 45.01 3.27
817 862 1.153005 GCCCTGGAATGGCTGAGAG 60.153 63.158 0.00 0.00 45.01 3.20
818 863 1.153005 CCCTGGAATGGCTGAGAGC 60.153 63.158 0.00 0.00 41.46 4.09
819 864 1.523258 CCTGGAATGGCTGAGAGCG 60.523 63.158 0.00 0.00 43.62 5.03
820 865 1.220206 CTGGAATGGCTGAGAGCGT 59.780 57.895 0.00 0.00 43.62 5.07
821 866 1.078918 TGGAATGGCTGAGAGCGTG 60.079 57.895 0.00 0.00 43.62 5.34
822 867 2.467826 GGAATGGCTGAGAGCGTGC 61.468 63.158 0.00 0.00 43.62 5.34
823 868 2.437359 AATGGCTGAGAGCGTGCC 60.437 61.111 0.00 0.00 43.62 5.01
826 871 3.123620 GGCTGAGAGCGTGCCAAG 61.124 66.667 0.00 0.00 43.62 3.61
827 872 2.358003 GCTGAGAGCGTGCCAAGT 60.358 61.111 0.00 0.00 0.00 3.16
828 873 2.675056 GCTGAGAGCGTGCCAAGTG 61.675 63.158 0.00 0.00 0.00 3.16
829 874 2.031012 TGAGAGCGTGCCAAGTGG 59.969 61.111 0.00 0.00 38.53 4.00
839 884 2.434884 CCAAGTGGCGCTGATCGT 60.435 61.111 7.64 0.00 41.07 3.73
840 885 2.034879 CCAAGTGGCGCTGATCGTT 61.035 57.895 7.64 0.00 41.07 3.85
841 886 1.133253 CAAGTGGCGCTGATCGTTG 59.867 57.895 7.64 0.00 41.07 4.10
842 887 2.680913 AAGTGGCGCTGATCGTTGC 61.681 57.895 7.64 0.00 41.07 4.17
848 893 2.510238 GCTGATCGTTGCGAGGCT 60.510 61.111 0.00 0.00 39.91 4.58
849 894 2.520904 GCTGATCGTTGCGAGGCTC 61.521 63.158 3.87 3.87 39.91 4.70
850 895 1.880340 CTGATCGTTGCGAGGCTCC 60.880 63.158 9.32 2.37 39.91 4.70
851 896 2.586357 GATCGTTGCGAGGCTCCC 60.586 66.667 9.32 0.00 39.91 4.30
852 897 4.514577 ATCGTTGCGAGGCTCCCG 62.515 66.667 9.32 6.56 39.91 5.14
854 899 4.735132 CGTTGCGAGGCTCCCGAA 62.735 66.667 9.32 0.00 0.00 4.30
855 900 2.358247 GTTGCGAGGCTCCCGAAA 60.358 61.111 9.32 0.00 0.00 3.46
856 901 1.964373 GTTGCGAGGCTCCCGAAAA 60.964 57.895 9.32 0.00 0.00 2.29
857 902 1.228003 TTGCGAGGCTCCCGAAAAA 60.228 52.632 9.32 0.00 0.00 1.94
877 922 5.352643 AAAACGCTCGTTAACTATTTGCT 57.647 34.783 8.14 0.00 37.35 3.91
878 923 4.579270 AACGCTCGTTAACTATTTGCTC 57.421 40.909 5.81 0.00 36.46 4.26
879 924 3.581755 ACGCTCGTTAACTATTTGCTCA 58.418 40.909 3.71 0.00 0.00 4.26
880 925 3.612860 ACGCTCGTTAACTATTTGCTCAG 59.387 43.478 3.71 0.00 0.00 3.35
881 926 3.000322 CGCTCGTTAACTATTTGCTCAGG 60.000 47.826 3.71 0.00 0.00 3.86
882 927 3.309954 GCTCGTTAACTATTTGCTCAGGG 59.690 47.826 3.71 0.00 0.00 4.45
883 928 3.267483 TCGTTAACTATTTGCTCAGGGC 58.733 45.455 3.71 0.00 42.22 5.19
910 955 2.809601 CGGAACTCGGCGGAACAG 60.810 66.667 7.21 0.00 34.75 3.16
993 1043 1.071471 CCCTGAAGTTCACTGGCGT 59.929 57.895 0.08 0.00 0.00 5.68
994 1044 0.320374 CCCTGAAGTTCACTGGCGTA 59.680 55.000 0.08 0.00 0.00 4.42
995 1045 1.429463 CCTGAAGTTCACTGGCGTAC 58.571 55.000 0.08 0.00 0.00 3.67
1356 1440 3.065306 CACCGGGCAAGTGGAGTA 58.935 61.111 6.32 0.00 0.00 2.59
1397 1482 1.091537 CGTGGTGGTGTTTTCTGTGT 58.908 50.000 0.00 0.00 0.00 3.72
1409 1494 1.410050 TTCTGTGTGCAGCAGGAGGA 61.410 55.000 15.62 0.00 42.29 3.71
1470 1555 0.171231 TCATGCTGGACGACGAAGAG 59.829 55.000 0.00 0.00 0.00 2.85
1658 1743 3.502191 CAGGTAAGTCAGCTGTCTCTC 57.498 52.381 14.67 9.74 45.82 3.20
1756 1841 1.071605 GGCAACACTCGCTTCTGTAG 58.928 55.000 0.00 0.00 0.00 2.74
1832 1917 5.596361 TCCCACTGAACATTACAACAACAAT 59.404 36.000 0.00 0.00 0.00 2.71
1849 1934 8.964150 CAACAACAATAACAACTAAGCCTTTAC 58.036 33.333 0.00 0.00 0.00 2.01
1851 1936 8.565416 ACAACAATAACAACTAAGCCTTTACTC 58.435 33.333 0.00 0.00 0.00 2.59
1853 1938 6.657966 ACAATAACAACTAAGCCTTTACTCCC 59.342 38.462 0.00 0.00 0.00 4.30
1856 1941 5.056553 ACAACTAAGCCTTTACTCCCAAA 57.943 39.130 0.00 0.00 0.00 3.28
1857 1942 4.825634 ACAACTAAGCCTTTACTCCCAAAC 59.174 41.667 0.00 0.00 0.00 2.93
1860 1945 5.070685 ACTAAGCCTTTACTCCCAAACAAG 58.929 41.667 0.00 0.00 0.00 3.16
1875 1960 2.337359 ACAAGTTGGGGTAGGCTAGA 57.663 50.000 7.96 0.00 0.00 2.43
2022 2110 5.355350 GTGCTCACTTCATTTATAGTTGCCT 59.645 40.000 0.00 0.00 0.00 4.75
2044 2143 0.034337 CTTGCCCAATGCCCATATGC 59.966 55.000 0.00 0.00 40.16 3.14
2045 2144 1.409251 TTGCCCAATGCCCATATGCC 61.409 55.000 0.00 0.00 40.16 4.40
2046 2145 1.837947 GCCCAATGCCCATATGCCA 60.838 57.895 0.00 0.00 0.00 4.92
2047 2146 1.196104 GCCCAATGCCCATATGCCAT 61.196 55.000 0.00 0.00 0.00 4.40
2048 2147 1.354101 CCCAATGCCCATATGCCATT 58.646 50.000 11.75 11.75 0.00 3.16
2049 2148 1.002659 CCCAATGCCCATATGCCATTG 59.997 52.381 25.32 25.32 33.46 2.82
2091 2191 0.185175 ATTTAAGGTGGGGCGGATCC 59.815 55.000 0.00 0.00 0.00 3.36
2092 2192 0.917333 TTTAAGGTGGGGCGGATCCT 60.917 55.000 10.75 0.00 34.39 3.24
2095 2195 0.917333 AAGGTGGGGCGGATCCTAAA 60.917 55.000 10.75 0.00 34.39 1.85
2109 2209 6.694877 GGATCCTAAAGCCGAGTAAATTTT 57.305 37.500 3.84 0.00 0.00 1.82
2136 2237 6.299023 TGCAATATGAAAATAGCCTGTACG 57.701 37.500 0.00 0.00 0.00 3.67
2145 2246 8.439993 TGAAAATAGCCTGTACGCAATAATAA 57.560 30.769 0.00 0.00 0.00 1.40
2146 2247 8.339714 TGAAAATAGCCTGTACGCAATAATAAC 58.660 33.333 0.00 0.00 0.00 1.89
2149 2250 4.766375 AGCCTGTACGCAATAATAACACT 58.234 39.130 0.00 0.00 0.00 3.55
2152 2253 5.276868 GCCTGTACGCAATAATAACACTCTG 60.277 44.000 0.00 0.00 0.00 3.35
2154 2255 6.701841 CCTGTACGCAATAATAACACTCTGAT 59.298 38.462 0.00 0.00 0.00 2.90
2156 2257 8.797266 TGTACGCAATAATAACACTCTGATAG 57.203 34.615 0.00 0.00 0.00 2.08
2197 2300 9.825972 AACTAATTGAAATACAATGAAGACGTG 57.174 29.630 0.00 0.00 46.90 4.49
2209 2312 7.688372 ACAATGAAGACGTGAGCATATTTAAG 58.312 34.615 0.00 0.00 0.00 1.85
2212 2315 7.987268 TGAAGACGTGAGCATATTTAAGTAG 57.013 36.000 0.00 0.00 0.00 2.57
2214 2317 7.701078 TGAAGACGTGAGCATATTTAAGTAGAC 59.299 37.037 0.00 0.00 0.00 2.59
2247 2350 9.081204 ACATATGGATAATGAAGCTTTAATGCA 57.919 29.630 15.00 0.00 34.99 3.96
2251 2354 8.241497 TGGATAATGAAGCTTTAATGCAATCT 57.759 30.769 15.00 2.44 34.99 2.40
2309 2413 9.868277 TCATAAATTCCCAACATGAAAATGTAC 57.132 29.630 0.00 0.00 33.81 2.90
2334 2438 9.790344 ACAAATTTATAGCTAGCTCTTGATCAT 57.210 29.630 23.26 9.89 0.00 2.45
2338 2442 9.790344 ATTTATAGCTAGCTCTTGATCATTTGT 57.210 29.630 23.26 0.00 0.00 2.83
2339 2443 9.618890 TTTATAGCTAGCTCTTGATCATTTGTT 57.381 29.630 23.26 0.00 0.00 2.83
2340 2444 9.618890 TTATAGCTAGCTCTTGATCATTTGTTT 57.381 29.630 23.26 0.00 0.00 2.83
2342 2446 7.551035 AGCTAGCTCTTGATCATTTGTTTAG 57.449 36.000 12.68 0.00 0.00 1.85
2343 2447 7.108847 AGCTAGCTCTTGATCATTTGTTTAGT 58.891 34.615 12.68 0.00 0.00 2.24
2344 2448 7.609532 AGCTAGCTCTTGATCATTTGTTTAGTT 59.390 33.333 12.68 0.00 0.00 2.24
2345 2449 7.907563 GCTAGCTCTTGATCATTTGTTTAGTTC 59.092 37.037 7.70 0.00 0.00 3.01
2346 2450 7.750229 AGCTCTTGATCATTTGTTTAGTTCA 57.250 32.000 0.00 0.00 0.00 3.18
2347 2451 8.169977 AGCTCTTGATCATTTGTTTAGTTCAA 57.830 30.769 0.00 0.00 0.00 2.69
2348 2452 8.295288 AGCTCTTGATCATTTGTTTAGTTCAAG 58.705 33.333 0.00 0.00 39.76 3.02
2349 2453 8.292448 GCTCTTGATCATTTGTTTAGTTCAAGA 58.708 33.333 10.86 10.86 42.98 3.02
2351 2455 8.292448 TCTTGATCATTTGTTTAGTTCAAGAGC 58.708 33.333 8.04 0.00 41.35 4.09
2352 2456 7.750229 TGATCATTTGTTTAGTTCAAGAGCT 57.250 32.000 0.00 0.00 0.00 4.09
2353 2457 8.846943 TGATCATTTGTTTAGTTCAAGAGCTA 57.153 30.769 0.00 0.00 0.00 3.32
2354 2458 9.453572 TGATCATTTGTTTAGTTCAAGAGCTAT 57.546 29.630 0.00 0.00 0.00 2.97
2355 2459 9.928236 GATCATTTGTTTAGTTCAAGAGCTATC 57.072 33.333 0.00 0.00 0.00 2.08
2356 2460 8.846943 TCATTTGTTTAGTTCAAGAGCTATCA 57.153 30.769 0.00 0.00 0.00 2.15
2357 2461 9.283768 TCATTTGTTTAGTTCAAGAGCTATCAA 57.716 29.630 0.00 2.53 0.00 2.57
2378 2482 0.888619 TTATAGCTCTCGGGATGGCG 59.111 55.000 0.00 0.00 0.00 5.69
2386 2490 2.510691 CGGGATGGCGTGGTGTAC 60.511 66.667 0.00 0.00 0.00 2.90
2387 2491 2.124860 GGGATGGCGTGGTGTACC 60.125 66.667 0.00 0.00 0.00 3.34
2415 2654 4.322080 TTTGAGAGAGTGTGGTGTGTAG 57.678 45.455 0.00 0.00 0.00 2.74
2417 2656 2.623416 TGAGAGAGTGTGGTGTGTAGTG 59.377 50.000 0.00 0.00 0.00 2.74
2427 2666 4.072088 GTGTAGTGGTGCGTGCGC 62.072 66.667 9.85 9.85 42.35 6.09
2430 2669 4.308458 TAGTGGTGCGTGCGCCTT 62.308 61.111 23.53 14.70 46.12 4.35
2435 2674 4.374702 GTGCGTGCGCCTTGAGTG 62.375 66.667 14.16 0.00 41.09 3.51
2436 2675 4.600576 TGCGTGCGCCTTGAGTGA 62.601 61.111 14.16 0.00 41.09 3.41
2438 2677 3.084579 CGTGCGCCTTGAGTGATC 58.915 61.111 4.18 0.00 0.00 2.92
2439 2678 2.792290 CGTGCGCCTTGAGTGATCG 61.792 63.158 4.18 0.00 0.00 3.69
2449 2688 0.982852 TGAGTGATCGGGATGGGCTT 60.983 55.000 0.00 0.00 0.00 4.35
2450 2689 0.533755 GAGTGATCGGGATGGGCTTG 60.534 60.000 0.00 0.00 0.00 4.01
2455 2694 0.846015 ATCGGGATGGGCTTGATTGA 59.154 50.000 0.00 0.00 0.00 2.57
2456 2695 0.623194 TCGGGATGGGCTTGATTGAA 59.377 50.000 0.00 0.00 0.00 2.69
2457 2696 0.740737 CGGGATGGGCTTGATTGAAC 59.259 55.000 0.00 0.00 0.00 3.18
2458 2697 0.740737 GGGATGGGCTTGATTGAACG 59.259 55.000 0.00 0.00 0.00 3.95
2459 2698 1.681780 GGGATGGGCTTGATTGAACGA 60.682 52.381 0.00 0.00 0.00 3.85
2460 2699 2.091541 GGATGGGCTTGATTGAACGAA 58.908 47.619 0.00 0.00 0.00 3.85
2461 2700 2.098117 GGATGGGCTTGATTGAACGAAG 59.902 50.000 0.00 0.00 0.00 3.79
2464 2703 3.702478 GCTTGATTGAACGAAGCCC 57.298 52.632 0.00 0.00 36.84 5.19
2465 2704 0.881118 GCTTGATTGAACGAAGCCCA 59.119 50.000 0.00 0.00 36.84 5.36
2466 2705 1.135575 GCTTGATTGAACGAAGCCCAG 60.136 52.381 0.00 0.00 36.84 4.45
2468 2707 0.250684 TGATTGAACGAAGCCCAGCA 60.251 50.000 0.00 0.00 0.00 4.41
2469 2708 0.881118 GATTGAACGAAGCCCAGCAA 59.119 50.000 0.00 0.00 0.00 3.91
2475 2729 2.554636 CGAAGCCCAGCAACAGCAA 61.555 57.895 0.00 0.00 0.00 3.91
2476 2730 1.006922 GAAGCCCAGCAACAGCAAC 60.007 57.895 0.00 0.00 0.00 4.17
2482 2736 0.313043 CCAGCAACAGCAACAGGAAG 59.687 55.000 0.00 0.00 0.00 3.46
2492 2746 1.002134 AACAGGAAGTCATGGGCCG 60.002 57.895 0.00 0.00 30.95 6.13
2497 2751 1.843851 AGGAAGTCATGGGCCGAAATA 59.156 47.619 0.00 0.00 0.00 1.40
2500 2754 1.663695 AGTCATGGGCCGAAATAACG 58.336 50.000 0.00 0.00 0.00 3.18
2504 2758 0.253610 ATGGGCCGAAATAACGTGGA 59.746 50.000 0.00 0.00 0.00 4.02
2506 2760 0.392060 GGGCCGAAATAACGTGGACT 60.392 55.000 0.00 0.00 0.00 3.85
2507 2761 0.725117 GGCCGAAATAACGTGGACTG 59.275 55.000 0.00 0.00 0.00 3.51
2510 2764 2.093783 GCCGAAATAACGTGGACTGAAG 59.906 50.000 0.00 0.00 0.00 3.02
2511 2765 2.093783 CCGAAATAACGTGGACTGAAGC 59.906 50.000 0.00 0.00 0.00 3.86
2512 2766 2.993899 CGAAATAACGTGGACTGAAGCT 59.006 45.455 0.00 0.00 0.00 3.74
2513 2767 3.181530 CGAAATAACGTGGACTGAAGCTG 60.182 47.826 0.00 0.00 0.00 4.24
2540 2834 2.202623 CGAGCACCACTAGCGACC 60.203 66.667 0.00 0.00 37.01 4.79
2548 2842 1.136984 CACTAGCGACCGTGACTCC 59.863 63.158 0.00 0.00 33.04 3.85
2550 2844 1.136984 CTAGCGACCGTGACTCCAC 59.863 63.158 0.00 0.00 39.86 4.02
2551 2845 1.583495 CTAGCGACCGTGACTCCACA 61.583 60.000 0.00 0.00 43.34 4.17
2552 2846 1.859427 TAGCGACCGTGACTCCACAC 61.859 60.000 0.00 0.00 43.34 3.82
2554 2848 1.660575 CGACCGTGACTCCACACAC 60.661 63.158 0.00 0.00 43.34 3.82
2562 2857 1.222115 GACTCCACACACGAACCAGC 61.222 60.000 0.00 0.00 0.00 4.85
2571 2866 2.664851 CGAACCAGCCAGCGACAA 60.665 61.111 0.00 0.00 0.00 3.18
2576 2871 1.447838 CCAGCCAGCGACAACGTAT 60.448 57.895 0.00 0.00 41.98 3.06
2579 2874 3.089784 CCAGCGACAACGTATGCC 58.910 61.111 0.00 0.00 41.98 4.40
2594 2889 3.488310 CGTATGCCTACGTGTACAAATCC 59.512 47.826 12.72 0.00 44.49 3.01
2597 2892 3.592059 TGCCTACGTGTACAAATCCTTC 58.408 45.455 0.00 0.00 0.00 3.46
2601 2896 2.066262 ACGTGTACAAATCCTTCTGCG 58.934 47.619 0.00 0.00 0.00 5.18
2604 2899 2.076100 TGTACAAATCCTTCTGCGCAG 58.924 47.619 31.53 31.53 0.00 5.18
2796 5724 5.235831 GTGGCCCAAGTTATTCTATCGTTAC 59.764 44.000 0.00 0.00 0.00 2.50
2802 5730 7.232127 CCCAAGTTATTCTATCGTTACTAGGGA 59.768 40.741 0.00 0.00 0.00 4.20
2857 5785 5.464389 TCGTTTGCTTAGGAGTCAAGTAAAC 59.536 40.000 18.76 18.76 46.38 2.01
2858 5786 5.333875 CGTTTGCTTAGGAGTCAAGTAAACC 60.334 44.000 20.91 10.72 46.78 3.27
2859 5787 5.562298 TTGCTTAGGAGTCAAGTAAACCT 57.438 39.130 0.00 0.00 35.11 3.50
2948 5876 1.382695 CCTTAGGGAGCCGGGAGAA 60.383 63.158 2.18 0.00 33.58 2.87
3069 5997 2.829023 TCTTTCCCCTACAATCTCCGT 58.171 47.619 0.00 0.00 0.00 4.69
3094 6022 1.489560 AACCGGCAGAACCCTAGCTT 61.490 55.000 0.00 0.00 33.26 3.74
3096 6024 1.153349 CGGCAGAACCCTAGCTTCC 60.153 63.158 0.00 0.00 33.26 3.46
3097 6025 1.617947 CGGCAGAACCCTAGCTTCCT 61.618 60.000 0.00 0.00 33.26 3.36
3099 6027 1.838077 GGCAGAACCCTAGCTTCCTAA 59.162 52.381 0.00 0.00 0.00 2.69
3100 6028 2.420269 GGCAGAACCCTAGCTTCCTAAC 60.420 54.545 0.00 0.00 0.00 2.34
3101 6029 2.236395 GCAGAACCCTAGCTTCCTAACA 59.764 50.000 0.00 0.00 0.00 2.41
3144 6072 1.138859 CACCGGATGCCTACTTGATGA 59.861 52.381 9.46 0.00 0.00 2.92
3187 7358 2.566833 ATCAGCAAAGGCACACACTA 57.433 45.000 0.00 0.00 44.61 2.74
3257 7432 3.411446 AGTTCGGTTCAGATTCATGCAA 58.589 40.909 0.00 0.00 0.00 4.08
3261 7436 2.098607 CGGTTCAGATTCATGCAATGCT 59.901 45.455 6.82 0.00 46.21 3.79
3308 7485 4.937201 ATTGACGTCTAGATATGCCACA 57.063 40.909 17.92 0.00 0.00 4.17
3322 7499 4.942761 ATGCCACAAGTCAAGTTTGATT 57.057 36.364 0.00 0.00 39.73 2.57
3343 7520 3.744940 ACATGGTGATGATTTGAGGGT 57.255 42.857 0.00 0.00 33.36 4.34
3350 7527 4.283212 GGTGATGATTTGAGGGTTGGAAAA 59.717 41.667 0.00 0.00 0.00 2.29
3607 7784 3.955524 TCTTGTTTTTAGTCACCCCCA 57.044 42.857 0.00 0.00 0.00 4.96
3625 7802 3.181463 CCCCATTCAATAATTGGGCACAG 60.181 47.826 1.54 0.00 40.26 3.66
3672 7849 5.056480 CCTGAACATATTGATTAGACCGCA 58.944 41.667 0.00 0.00 0.00 5.69
3760 7937 1.812922 CACTGCCGGATGCTGACTC 60.813 63.158 5.05 0.00 41.11 3.36
3765 7942 1.812922 CCGGATGCTGACTCTGTGC 60.813 63.158 0.00 0.00 0.00 4.57
3771 7948 1.812922 GCTGACTCTGTGCATCCCG 60.813 63.158 0.00 0.00 0.00 5.14
3772 7949 1.153489 CTGACTCTGTGCATCCCGG 60.153 63.158 0.00 0.00 0.00 5.73
3889 8073 9.859427 CATCTGCTTGGATTCAAATTTAAGTTA 57.141 29.630 0.00 0.00 31.77 2.24
3921 8122 6.072199 AGCCTGGTTCTCTATTTCTCATTT 57.928 37.500 0.00 0.00 0.00 2.32
4193 8397 3.265791 GGCTTAGACATGAACTCCAGTG 58.734 50.000 0.00 0.00 0.00 3.66
4246 8450 9.744468 AAGTGATGATTGTAAGTTTTGGTTTAC 57.256 29.630 0.00 0.00 0.00 2.01
4425 8634 8.578448 TCCTGATTCATGTATGTTTTCATTCA 57.422 30.769 0.00 0.00 40.71 2.57
4433 8642 8.859090 TCATGTATGTTTTCATTCAAAGGAACT 58.141 29.630 0.00 0.00 40.07 3.01
4471 8687 5.710567 GCCCTAAATTATATCTGACCCAACC 59.289 44.000 0.00 0.00 0.00 3.77
4530 8746 4.470334 AATGGTATGTTTGGATTGTGGC 57.530 40.909 0.00 0.00 0.00 5.01
4531 8747 2.175202 TGGTATGTTTGGATTGTGGCC 58.825 47.619 0.00 0.00 0.00 5.36
4532 8748 2.175202 GGTATGTTTGGATTGTGGCCA 58.825 47.619 0.00 0.00 0.00 5.36
4533 8749 2.564947 GGTATGTTTGGATTGTGGCCAA 59.435 45.455 7.24 0.00 43.31 4.52
4538 8754 0.392336 TTGGATTGTGGCCAAAGTGC 59.608 50.000 7.24 4.53 42.13 4.40
4539 8755 0.758310 TGGATTGTGGCCAAAGTGCA 60.758 50.000 7.24 8.09 33.44 4.57
4540 8756 0.319813 GGATTGTGGCCAAAGTGCAC 60.320 55.000 7.24 9.40 33.44 4.57
4541 8757 0.319813 GATTGTGGCCAAAGTGCACC 60.320 55.000 14.63 0.00 33.44 5.01
4542 8758 1.757423 ATTGTGGCCAAAGTGCACCC 61.757 55.000 14.63 7.74 33.44 4.61
4543 8759 2.521708 GTGGCCAAAGTGCACCCT 60.522 61.111 14.63 0.00 0.00 4.34
4544 8760 1.228429 GTGGCCAAAGTGCACCCTA 60.228 57.895 14.63 0.00 0.00 3.53
4545 8761 1.228429 TGGCCAAAGTGCACCCTAC 60.228 57.895 14.63 0.00 0.00 3.18
4546 8762 1.977009 GGCCAAAGTGCACCCTACC 60.977 63.158 14.63 5.46 0.00 3.18
4547 8763 1.228429 GCCAAAGTGCACCCTACCA 60.228 57.895 14.63 0.00 0.00 3.25
4548 8764 0.825840 GCCAAAGTGCACCCTACCAA 60.826 55.000 14.63 0.00 0.00 3.67
4549 8765 1.698506 CCAAAGTGCACCCTACCAAA 58.301 50.000 14.63 0.00 0.00 3.28
4550 8766 2.035632 CCAAAGTGCACCCTACCAAAA 58.964 47.619 14.63 0.00 0.00 2.44
4551 8767 2.632512 CCAAAGTGCACCCTACCAAAAT 59.367 45.455 14.63 0.00 0.00 1.82
4552 8768 3.070878 CCAAAGTGCACCCTACCAAAATT 59.929 43.478 14.63 0.00 0.00 1.82
4553 8769 4.444164 CCAAAGTGCACCCTACCAAAATTT 60.444 41.667 14.63 0.05 0.00 1.82
4554 8770 5.122519 CAAAGTGCACCCTACCAAAATTTT 58.877 37.500 14.63 0.00 0.00 1.82
4555 8771 4.335400 AGTGCACCCTACCAAAATTTTG 57.665 40.909 21.65 21.65 37.90 2.44
4585 8801 4.693538 CCAAAGGTTGGTTTTTGTTTGG 57.306 40.909 0.00 0.00 45.93 3.28
4586 8802 4.327680 CCAAAGGTTGGTTTTTGTTTGGA 58.672 39.130 5.86 0.00 44.43 3.53
4587 8803 4.946772 CCAAAGGTTGGTTTTTGTTTGGAT 59.053 37.500 5.86 0.00 44.43 3.41
4588 8804 5.163673 CCAAAGGTTGGTTTTTGTTTGGATG 60.164 40.000 5.86 0.00 44.43 3.51
4589 8805 4.149511 AGGTTGGTTTTTGTTTGGATGG 57.850 40.909 0.00 0.00 0.00 3.51
4590 8806 3.521531 AGGTTGGTTTTTGTTTGGATGGT 59.478 39.130 0.00 0.00 0.00 3.55
4591 8807 4.018870 AGGTTGGTTTTTGTTTGGATGGTT 60.019 37.500 0.00 0.00 0.00 3.67
4592 8808 4.095632 GGTTGGTTTTTGTTTGGATGGTTG 59.904 41.667 0.00 0.00 0.00 3.77
4593 8809 3.274288 TGGTTTTTGTTTGGATGGTTGC 58.726 40.909 0.00 0.00 0.00 4.17
4594 8810 2.616376 GGTTTTTGTTTGGATGGTTGCC 59.384 45.455 0.00 0.00 0.00 4.52
4595 8811 3.274288 GTTTTTGTTTGGATGGTTGCCA 58.726 40.909 0.00 0.00 38.19 4.92
4596 8812 3.634397 TTTTGTTTGGATGGTTGCCAA 57.366 38.095 0.00 0.00 43.31 4.52
4597 8813 3.853355 TTTGTTTGGATGGTTGCCAAT 57.147 38.095 0.00 0.00 44.30 3.16
4598 8814 3.853355 TTGTTTGGATGGTTGCCAATT 57.147 38.095 0.00 0.00 44.30 2.32
4599 8815 3.853355 TGTTTGGATGGTTGCCAATTT 57.147 38.095 0.00 0.00 44.30 1.82
4600 8816 3.474600 TGTTTGGATGGTTGCCAATTTG 58.525 40.909 0.00 0.00 44.30 2.32
4601 8817 3.118112 TGTTTGGATGGTTGCCAATTTGT 60.118 39.130 0.00 0.00 44.30 2.83
4602 8818 3.853355 TTGGATGGTTGCCAATTTGTT 57.147 38.095 0.00 0.00 40.32 2.83
4603 8819 3.123157 TGGATGGTTGCCAATTTGTTG 57.877 42.857 0.00 0.00 36.95 3.33
4604 8820 1.805943 GGATGGTTGCCAATTTGTTGC 59.194 47.619 0.00 0.00 36.95 4.17
4605 8821 1.805943 GATGGTTGCCAATTTGTTGCC 59.194 47.619 0.00 0.00 36.95 4.52
4606 8822 0.543277 TGGTTGCCAATTTGTTGCCA 59.457 45.000 0.00 0.00 0.00 4.92
4607 8823 1.142465 TGGTTGCCAATTTGTTGCCAT 59.858 42.857 0.00 0.00 0.00 4.40
4608 8824 1.536331 GGTTGCCAATTTGTTGCCATG 59.464 47.619 0.00 0.00 0.00 3.66
4609 8825 1.069091 GTTGCCAATTTGTTGCCATGC 60.069 47.619 0.00 0.00 0.00 4.06
4610 8826 0.605860 TGCCAATTTGTTGCCATGCC 60.606 50.000 0.00 0.00 0.00 4.40
4611 8827 0.605860 GCCAATTTGTTGCCATGCCA 60.606 50.000 0.00 0.00 0.00 4.92
4612 8828 1.893544 CCAATTTGTTGCCATGCCAA 58.106 45.000 0.00 0.00 0.00 4.52
4613 8829 2.438411 CCAATTTGTTGCCATGCCAAT 58.562 42.857 0.00 0.00 0.00 3.16
4614 8830 2.162608 CCAATTTGTTGCCATGCCAATG 59.837 45.455 0.00 0.00 0.00 2.82
4615 8831 3.075148 CAATTTGTTGCCATGCCAATGA 58.925 40.909 0.00 0.00 35.67 2.57
4616 8832 2.924757 TTTGTTGCCATGCCAATGAA 57.075 40.000 0.00 0.00 35.67 2.57
4617 8833 2.166821 TTGTTGCCATGCCAATGAAC 57.833 45.000 0.00 0.00 35.67 3.18
4618 8834 1.340088 TGTTGCCATGCCAATGAACT 58.660 45.000 0.00 0.00 35.67 3.01
4619 8835 1.273048 TGTTGCCATGCCAATGAACTC 59.727 47.619 0.00 0.00 35.67 3.01
4620 8836 1.547372 GTTGCCATGCCAATGAACTCT 59.453 47.619 0.00 0.00 35.67 3.24
4621 8837 2.754552 GTTGCCATGCCAATGAACTCTA 59.245 45.455 0.00 0.00 35.67 2.43
4622 8838 2.646930 TGCCATGCCAATGAACTCTAG 58.353 47.619 0.00 0.00 35.67 2.43
4623 8839 1.336125 GCCATGCCAATGAACTCTAGC 59.664 52.381 0.00 0.00 35.67 3.42
4624 8840 1.952296 CCATGCCAATGAACTCTAGCC 59.048 52.381 0.00 0.00 35.67 3.93
4625 8841 2.646930 CATGCCAATGAACTCTAGCCA 58.353 47.619 0.00 0.00 35.67 4.75
4626 8842 2.877097 TGCCAATGAACTCTAGCCAA 57.123 45.000 0.00 0.00 0.00 4.52
4627 8843 3.370840 TGCCAATGAACTCTAGCCAAT 57.629 42.857 0.00 0.00 0.00 3.16
4628 8844 3.700538 TGCCAATGAACTCTAGCCAATT 58.299 40.909 0.00 0.00 0.00 2.32
4629 8845 3.696051 TGCCAATGAACTCTAGCCAATTC 59.304 43.478 0.00 0.00 0.00 2.17
4630 8846 3.950395 GCCAATGAACTCTAGCCAATTCT 59.050 43.478 0.00 0.00 0.00 2.40
4631 8847 5.126067 GCCAATGAACTCTAGCCAATTCTA 58.874 41.667 0.00 0.00 0.00 2.10
4632 8848 5.590259 GCCAATGAACTCTAGCCAATTCTAA 59.410 40.000 0.00 0.00 0.00 2.10
4633 8849 6.264067 GCCAATGAACTCTAGCCAATTCTAAT 59.736 38.462 0.00 0.00 0.00 1.73
4634 8850 7.201857 GCCAATGAACTCTAGCCAATTCTAATT 60.202 37.037 0.00 0.00 0.00 1.40
4635 8851 8.689972 CCAATGAACTCTAGCCAATTCTAATTT 58.310 33.333 0.00 0.00 0.00 1.82
4647 8863 9.166173 AGCCAATTCTAATTTATTTTTCTTGCC 57.834 29.630 0.00 0.00 0.00 4.52
4648 8864 8.945057 GCCAATTCTAATTTATTTTTCTTGCCA 58.055 29.630 0.00 0.00 0.00 4.92
4667 8883 3.864243 CCAATGTTGGTCAAATCATGGG 58.136 45.455 3.58 0.00 43.43 4.00
4668 8884 3.264104 CAATGTTGGTCAAATCATGGGC 58.736 45.455 0.00 0.00 0.00 5.36
4669 8885 2.006805 TGTTGGTCAAATCATGGGCA 57.993 45.000 0.00 0.00 0.00 5.36
4670 8886 2.323599 TGTTGGTCAAATCATGGGCAA 58.676 42.857 0.00 0.00 0.00 4.52
4671 8887 2.905085 TGTTGGTCAAATCATGGGCAAT 59.095 40.909 0.00 0.00 0.00 3.56
4672 8888 3.055963 TGTTGGTCAAATCATGGGCAATC 60.056 43.478 0.00 0.00 0.00 2.67
4673 8889 2.817665 TGGTCAAATCATGGGCAATCA 58.182 42.857 0.00 0.00 0.00 2.57
4674 8890 3.171528 TGGTCAAATCATGGGCAATCAA 58.828 40.909 0.00 0.00 0.00 2.57
4675 8891 3.581770 TGGTCAAATCATGGGCAATCAAA 59.418 39.130 0.00 0.00 0.00 2.69
4676 8892 4.041321 TGGTCAAATCATGGGCAATCAAAA 59.959 37.500 0.00 0.00 0.00 2.44
4677 8893 4.392754 GGTCAAATCATGGGCAATCAAAAC 59.607 41.667 0.00 0.00 0.00 2.43
4678 8894 4.392754 GTCAAATCATGGGCAATCAAAACC 59.607 41.667 0.00 0.00 0.00 3.27
4679 8895 4.286549 TCAAATCATGGGCAATCAAAACCT 59.713 37.500 0.00 0.00 0.00 3.50
4680 8896 4.476628 AATCATGGGCAATCAAAACCTC 57.523 40.909 0.00 0.00 0.00 3.85
4681 8897 2.886913 TCATGGGCAATCAAAACCTCA 58.113 42.857 0.00 0.00 0.00 3.86
4682 8898 3.237746 TCATGGGCAATCAAAACCTCAA 58.762 40.909 0.00 0.00 0.00 3.02
4683 8899 3.006752 TCATGGGCAATCAAAACCTCAAC 59.993 43.478 0.00 0.00 0.00 3.18
4684 8900 1.691434 TGGGCAATCAAAACCTCAACC 59.309 47.619 0.00 0.00 0.00 3.77
4685 8901 1.691434 GGGCAATCAAAACCTCAACCA 59.309 47.619 0.00 0.00 0.00 3.67
4686 8902 2.103941 GGGCAATCAAAACCTCAACCAA 59.896 45.455 0.00 0.00 0.00 3.67
4687 8903 3.244526 GGGCAATCAAAACCTCAACCAAT 60.245 43.478 0.00 0.00 0.00 3.16
4688 8904 4.020662 GGGCAATCAAAACCTCAACCAATA 60.021 41.667 0.00 0.00 0.00 1.90
4689 8905 5.338300 GGGCAATCAAAACCTCAACCAATAT 60.338 40.000 0.00 0.00 0.00 1.28
4690 8906 6.172630 GGCAATCAAAACCTCAACCAATATT 58.827 36.000 0.00 0.00 0.00 1.28
4691 8907 6.654582 GGCAATCAAAACCTCAACCAATATTT 59.345 34.615 0.00 0.00 0.00 1.40
4692 8908 7.174772 GGCAATCAAAACCTCAACCAATATTTT 59.825 33.333 0.00 0.00 0.00 1.82
4693 8909 8.016801 GCAATCAAAACCTCAACCAATATTTTG 58.983 33.333 0.00 0.00 38.03 2.44
4714 8930 2.427095 GGCTAGCCAATACTTTGTTGGG 59.573 50.000 29.33 0.00 44.96 4.12
4715 8931 2.427095 GCTAGCCAATACTTTGTTGGGG 59.573 50.000 2.29 0.00 44.96 4.96
4716 8932 1.266178 AGCCAATACTTTGTTGGGGC 58.734 50.000 6.98 0.00 44.96 5.80
4717 8933 0.972883 GCCAATACTTTGTTGGGGCA 59.027 50.000 6.98 0.00 44.96 5.36
4718 8934 1.346068 GCCAATACTTTGTTGGGGCAA 59.654 47.619 6.98 0.00 44.96 4.52
4719 8935 2.870035 GCCAATACTTTGTTGGGGCAAC 60.870 50.000 6.98 0.00 44.96 4.17
4732 8948 3.832704 GGCAACCTTGGGCATAAAC 57.167 52.632 0.00 0.00 0.00 2.01
4733 8949 0.249120 GGCAACCTTGGGCATAAACC 59.751 55.000 0.00 0.00 0.00 3.27
4734 8950 0.972883 GCAACCTTGGGCATAAACCA 59.027 50.000 0.00 0.00 35.88 3.67
4735 8951 1.346068 GCAACCTTGGGCATAAACCAA 59.654 47.619 0.00 0.00 45.25 3.67
4736 8952 2.224402 GCAACCTTGGGCATAAACCAAA 60.224 45.455 0.00 0.00 46.54 3.28
4737 8953 3.398406 CAACCTTGGGCATAAACCAAAC 58.602 45.455 0.00 0.00 46.54 2.93
4738 8954 2.683768 ACCTTGGGCATAAACCAAACA 58.316 42.857 0.00 0.00 46.54 2.83
4739 8955 2.367241 ACCTTGGGCATAAACCAAACAC 59.633 45.455 0.00 0.00 46.54 3.32
4740 8956 2.366916 CCTTGGGCATAAACCAAACACA 59.633 45.455 0.00 0.00 46.54 3.72
4741 8957 3.389221 CTTGGGCATAAACCAAACACAC 58.611 45.455 0.00 0.00 46.54 3.82
4742 8958 1.689273 TGGGCATAAACCAAACACACC 59.311 47.619 0.00 0.00 34.44 4.16
4743 8959 1.001520 GGGCATAAACCAAACACACCC 59.998 52.381 0.00 0.00 0.00 4.61
4775 8991 4.393371 GCTTTTACTTTCCAGTCTAGCAGG 59.607 45.833 0.00 0.00 33.84 4.85
4793 9009 6.105397 AGCAGGAACAACAATGATGAAAAT 57.895 33.333 0.00 0.00 0.00 1.82
4806 9022 5.070770 TGATGAAAATAAAGCGGCAATGT 57.929 34.783 1.45 0.00 0.00 2.71
4816 9032 2.224606 AGCGGCAATGTCAATCATAGG 58.775 47.619 1.45 0.00 35.48 2.57
5016 9473 3.243359 TGGGCCTTTCTTTGTTGATCT 57.757 42.857 4.53 0.00 0.00 2.75
5047 9504 9.816787 ACCCCATAACTAGTTGATTTTCTAAAA 57.183 29.630 18.56 0.00 0.00 1.52
5306 9768 3.533547 AGCTGCATTCTGAGCTTCTAAG 58.466 45.455 1.02 0.00 43.15 2.18
5307 9769 2.613133 GCTGCATTCTGAGCTTCTAAGG 59.387 50.000 0.00 0.00 32.12 2.69
5320 9782 3.883489 GCTTCTAAGGAACACACCAACTT 59.117 43.478 0.00 0.00 0.00 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 4.882671 ATGGAGCATTATTGTTGTCGAC 57.117 40.909 9.11 9.11 0.00 4.20
20 21 3.795623 ATGACTTTGCATCAATGGAGC 57.204 42.857 0.00 0.00 0.00 4.70
173 180 9.837681 TCATTCTATGTCCATATCTAGGGTTTA 57.162 33.333 0.00 0.00 0.00 2.01
252 271 8.099364 TCAACTATCCATCTGAAGTTTCAAAC 57.901 34.615 0.00 0.00 36.64 2.93
307 340 3.514539 TCCTGATCCATTCATCGATCCT 58.485 45.455 0.00 0.00 35.09 3.24
586 628 3.240134 AAGCATCAGCCACGACGGT 62.240 57.895 0.00 0.00 43.56 4.83
649 692 0.323360 GTGCTTGGCCCATCAGGTAA 60.323 55.000 0.00 0.00 38.26 2.85
657 700 0.040058 AATGAGATGTGCTTGGCCCA 59.960 50.000 0.00 0.00 0.00 5.36
810 855 2.358003 ACTTGGCACGCTCTCAGC 60.358 61.111 0.00 0.00 38.02 4.26
811 856 2.031516 CCACTTGGCACGCTCTCAG 61.032 63.158 0.00 0.00 0.00 3.35
812 857 2.031012 CCACTTGGCACGCTCTCA 59.969 61.111 0.00 0.00 0.00 3.27
822 867 2.034879 AACGATCAGCGCCACTTGG 61.035 57.895 2.29 0.00 46.04 3.61
823 868 1.133253 CAACGATCAGCGCCACTTG 59.867 57.895 2.29 0.00 46.04 3.16
824 869 2.680913 GCAACGATCAGCGCCACTT 61.681 57.895 2.29 0.00 46.04 3.16
825 870 3.121030 GCAACGATCAGCGCCACT 61.121 61.111 2.29 0.00 46.04 4.00
831 876 2.510238 AGCCTCGCAACGATCAGC 60.510 61.111 0.00 0.00 34.61 4.26
832 877 1.880340 GGAGCCTCGCAACGATCAG 60.880 63.158 0.00 0.00 34.61 2.90
833 878 2.184322 GGAGCCTCGCAACGATCA 59.816 61.111 0.00 0.00 34.61 2.92
834 879 2.586357 GGGAGCCTCGCAACGATC 60.586 66.667 3.57 0.00 34.61 3.69
835 880 4.514577 CGGGAGCCTCGCAACGAT 62.515 66.667 9.61 0.00 34.61 3.73
837 882 4.735132 TTCGGGAGCCTCGCAACG 62.735 66.667 9.61 0.36 0.00 4.10
838 883 1.512156 TTTTTCGGGAGCCTCGCAAC 61.512 55.000 9.61 0.00 0.00 4.17
839 884 1.228003 TTTTTCGGGAGCCTCGCAA 60.228 52.632 9.61 0.17 0.00 4.85
840 885 2.428187 TTTTTCGGGAGCCTCGCA 59.572 55.556 9.61 0.00 0.00 5.10
854 899 5.754778 AGCAAATAGTTAACGAGCGTTTTT 58.245 33.333 13.78 5.22 39.31 1.94
855 900 5.049954 TGAGCAAATAGTTAACGAGCGTTTT 60.050 36.000 13.78 0.00 39.31 2.43
856 901 4.449743 TGAGCAAATAGTTAACGAGCGTTT 59.550 37.500 13.78 0.00 39.31 3.60
857 902 3.991773 TGAGCAAATAGTTAACGAGCGTT 59.008 39.130 13.11 13.11 41.65 4.84
858 903 3.581755 TGAGCAAATAGTTAACGAGCGT 58.418 40.909 0.00 0.00 0.00 5.07
859 904 3.000322 CCTGAGCAAATAGTTAACGAGCG 60.000 47.826 0.00 0.00 0.00 5.03
860 905 3.309954 CCCTGAGCAAATAGTTAACGAGC 59.690 47.826 0.00 1.72 0.00 5.03
861 906 3.309954 GCCCTGAGCAAATAGTTAACGAG 59.690 47.826 0.00 0.00 42.97 4.18
862 907 3.267483 GCCCTGAGCAAATAGTTAACGA 58.733 45.455 0.00 0.00 42.97 3.85
863 908 3.675467 GCCCTGAGCAAATAGTTAACG 57.325 47.619 0.00 0.00 42.97 3.18
875 920 2.894387 GATCGCAGTGCCCTGAGC 60.894 66.667 10.11 0.00 41.50 4.26
876 921 2.202987 GGATCGCAGTGCCCTGAG 60.203 66.667 10.11 0.00 41.50 3.35
877 922 4.147449 CGGATCGCAGTGCCCTGA 62.147 66.667 10.11 1.02 41.50 3.86
880 925 4.467084 TTCCGGATCGCAGTGCCC 62.467 66.667 4.15 4.01 0.00 5.36
881 926 3.195698 GTTCCGGATCGCAGTGCC 61.196 66.667 4.15 0.00 0.00 5.01
882 927 2.125512 AGTTCCGGATCGCAGTGC 60.126 61.111 4.15 4.58 0.00 4.40
883 928 1.874019 CGAGTTCCGGATCGCAGTG 60.874 63.158 14.06 0.00 31.42 3.66
884 929 2.490217 CGAGTTCCGGATCGCAGT 59.510 61.111 14.06 0.00 31.42 4.40
904 949 0.681243 GGCCCATGGACTTCTGTTCC 60.681 60.000 15.22 0.00 0.00 3.62
905 950 1.026718 CGGCCCATGGACTTCTGTTC 61.027 60.000 15.22 0.00 0.00 3.18
906 951 1.002134 CGGCCCATGGACTTCTGTT 60.002 57.895 15.22 0.00 0.00 3.16
907 952 1.488705 TTCGGCCCATGGACTTCTGT 61.489 55.000 15.22 0.00 0.00 3.41
908 953 0.745845 CTTCGGCCCATGGACTTCTG 60.746 60.000 15.22 4.59 0.00 3.02
910 955 0.181350 ATCTTCGGCCCATGGACTTC 59.819 55.000 15.22 0.00 0.00 3.01
993 1043 2.167693 CCTTATCTGGACAGCAACGGTA 59.832 50.000 0.00 0.00 0.00 4.02
994 1044 1.066143 CCTTATCTGGACAGCAACGGT 60.066 52.381 0.00 0.00 0.00 4.83
995 1045 1.656652 CCTTATCTGGACAGCAACGG 58.343 55.000 0.00 0.00 0.00 4.44
1282 1366 2.093921 GCTTACTTTCTCGGAAGGCTCT 60.094 50.000 0.00 0.00 0.00 4.09
1356 1440 2.300152 TCGTCTCAAAACTGAGCAGGAT 59.700 45.455 2.20 0.00 35.97 3.24
1397 1482 1.881903 CGACTTCTCCTCCTGCTGCA 61.882 60.000 0.88 0.88 0.00 4.41
1409 1494 1.065564 AGTAGTAGGTCCGCGACTTCT 60.066 52.381 8.23 8.66 32.47 2.85
1470 1555 1.744741 GAGCTGCTCCTGGAAGTGC 60.745 63.158 18.80 0.00 33.13 4.40
1810 1895 7.918033 TGTTATTGTTGTTGTAATGTTCAGTGG 59.082 33.333 0.00 0.00 0.00 4.00
1812 1897 9.296400 GTTGTTATTGTTGTTGTAATGTTCAGT 57.704 29.630 0.00 0.00 0.00 3.41
1832 1917 5.829062 TGGGAGTAAAGGCTTAGTTGTTA 57.171 39.130 0.00 0.00 0.00 2.41
1853 1938 1.995376 AGCCTACCCCAACTTGTTTG 58.005 50.000 0.00 0.00 34.63 2.93
1856 1941 2.188817 CTCTAGCCTACCCCAACTTGT 58.811 52.381 0.00 0.00 0.00 3.16
1857 1942 1.134371 GCTCTAGCCTACCCCAACTTG 60.134 57.143 0.00 0.00 34.31 3.16
1860 1945 0.466124 CAGCTCTAGCCTACCCCAAC 59.534 60.000 0.00 0.00 43.38 3.77
1866 1951 1.202428 CGGGTTTCAGCTCTAGCCTAC 60.202 57.143 0.00 0.00 43.38 3.18
1875 1960 2.159226 CGAGATCTTACGGGTTTCAGCT 60.159 50.000 0.00 0.00 0.00 4.24
1980 2068 3.067742 AGCACTTACTAGTCACAACACGT 59.932 43.478 0.00 0.00 30.26 4.49
1983 2071 4.341235 AGTGAGCACTTACTAGTCACAACA 59.659 41.667 0.00 0.00 38.83 3.33
2044 2143 3.136123 CTCCGCCACTGCCAATGG 61.136 66.667 0.00 0.00 40.50 3.16
2045 2144 3.136123 CCTCCGCCACTGCCAATG 61.136 66.667 0.00 0.00 0.00 2.82
2046 2145 3.329889 TCCTCCGCCACTGCCAAT 61.330 61.111 0.00 0.00 0.00 3.16
2047 2146 4.329545 GTCCTCCGCCACTGCCAA 62.330 66.667 0.00 0.00 0.00 4.52
2111 2211 7.360861 GCGTACAGGCTATTTTCATATTGCATA 60.361 37.037 0.00 0.00 0.00 3.14
2121 2221 8.339714 TGTTATTATTGCGTACAGGCTATTTTC 58.660 33.333 0.00 0.00 31.11 2.29
2126 2226 5.909477 AGTGTTATTATTGCGTACAGGCTA 58.091 37.500 0.00 0.00 0.00 3.93
2127 2227 4.766375 AGTGTTATTATTGCGTACAGGCT 58.234 39.130 0.00 0.00 0.00 4.58
2128 2228 4.809426 AGAGTGTTATTATTGCGTACAGGC 59.191 41.667 0.00 0.00 0.00 4.85
2129 2229 6.040247 TCAGAGTGTTATTATTGCGTACAGG 58.960 40.000 0.00 0.00 0.00 4.00
2132 2232 8.798748 ACTATCAGAGTGTTATTATTGCGTAC 57.201 34.615 0.00 0.00 36.87 3.67
2145 2246 8.603242 AAAATCACGTAAAACTATCAGAGTGT 57.397 30.769 0.00 0.00 38.87 3.55
2179 2281 5.530519 TGCTCACGTCTTCATTGTATTTC 57.469 39.130 0.00 0.00 0.00 2.17
2185 2287 7.688372 ACTTAAATATGCTCACGTCTTCATTG 58.312 34.615 0.00 0.00 0.00 2.82
2188 2290 7.701078 GTCTACTTAAATATGCTCACGTCTTCA 59.299 37.037 0.00 0.00 0.00 3.02
2192 2295 6.418226 CAGGTCTACTTAAATATGCTCACGTC 59.582 42.308 0.00 0.00 0.00 4.34
2194 2297 6.504398 TCAGGTCTACTTAAATATGCTCACG 58.496 40.000 0.00 0.00 0.00 4.35
2196 2299 9.162764 GTTTTCAGGTCTACTTAAATATGCTCA 57.837 33.333 0.00 0.00 0.00 4.26
2197 2300 9.162764 TGTTTTCAGGTCTACTTAAATATGCTC 57.837 33.333 0.00 0.00 0.00 4.26
2209 2312 9.778741 TCATTATCCATATGTTTTCAGGTCTAC 57.221 33.333 1.24 0.00 0.00 2.59
2212 2315 8.078596 GCTTCATTATCCATATGTTTTCAGGTC 58.921 37.037 1.24 0.00 0.00 3.85
2214 2317 8.174733 AGCTTCATTATCCATATGTTTTCAGG 57.825 34.615 1.24 0.00 0.00 3.86
2247 2350 6.991938 AGAGAATAGCTTCGCAATCTAGATT 58.008 36.000 12.37 12.37 36.45 2.40
2251 2354 5.774498 TGAGAGAATAGCTTCGCAATCTA 57.226 39.130 0.00 0.00 36.45 1.98
2287 2391 8.970859 TTTGTACATTTTCATGTTGGGAATTT 57.029 26.923 0.00 0.00 41.16 1.82
2319 2423 7.313951 ACTAAACAAATGATCAAGAGCTAGC 57.686 36.000 6.62 6.62 0.00 3.42
2322 2426 7.750229 TGAACTAAACAAATGATCAAGAGCT 57.250 32.000 0.00 0.00 0.00 4.09
2323 2427 8.292448 TCTTGAACTAAACAAATGATCAAGAGC 58.708 33.333 0.00 0.00 43.58 4.09
2325 2429 8.292448 GCTCTTGAACTAAACAAATGATCAAGA 58.708 33.333 12.94 12.94 45.19 3.02
2326 2430 8.295288 AGCTCTTGAACTAAACAAATGATCAAG 58.705 33.333 0.00 6.33 42.10 3.02
2328 2432 7.750229 AGCTCTTGAACTAAACAAATGATCA 57.250 32.000 0.00 0.00 0.00 2.92
2329 2433 9.928236 GATAGCTCTTGAACTAAACAAATGATC 57.072 33.333 0.00 0.00 0.00 2.92
2330 2434 9.453572 TGATAGCTCTTGAACTAAACAAATGAT 57.546 29.630 0.00 0.00 0.00 2.45
2331 2435 8.846943 TGATAGCTCTTGAACTAAACAAATGA 57.153 30.769 0.00 0.00 0.00 2.57
2351 2455 6.983307 CCATCCCGAGAGCTATAAATTGATAG 59.017 42.308 5.53 5.53 33.27 2.08
2352 2456 6.630413 GCCATCCCGAGAGCTATAAATTGATA 60.630 42.308 0.00 0.00 0.00 2.15
2353 2457 5.738909 CCATCCCGAGAGCTATAAATTGAT 58.261 41.667 0.00 0.00 0.00 2.57
2354 2458 4.563580 GCCATCCCGAGAGCTATAAATTGA 60.564 45.833 0.00 0.00 0.00 2.57
2355 2459 3.686726 GCCATCCCGAGAGCTATAAATTG 59.313 47.826 0.00 0.00 0.00 2.32
2356 2460 3.617531 CGCCATCCCGAGAGCTATAAATT 60.618 47.826 0.00 0.00 0.00 1.82
2357 2461 2.093973 CGCCATCCCGAGAGCTATAAAT 60.094 50.000 0.00 0.00 0.00 1.40
2358 2462 1.272490 CGCCATCCCGAGAGCTATAAA 59.728 52.381 0.00 0.00 0.00 1.40
2359 2463 0.888619 CGCCATCCCGAGAGCTATAA 59.111 55.000 0.00 0.00 0.00 0.98
2360 2464 0.251209 ACGCCATCCCGAGAGCTATA 60.251 55.000 0.00 0.00 0.00 1.31
2361 2465 1.531840 ACGCCATCCCGAGAGCTAT 60.532 57.895 0.00 0.00 0.00 2.97
2362 2466 2.123854 ACGCCATCCCGAGAGCTA 60.124 61.111 0.00 0.00 0.00 3.32
2363 2467 3.842923 CACGCCATCCCGAGAGCT 61.843 66.667 0.00 0.00 0.00 4.09
2364 2468 4.899239 CCACGCCATCCCGAGAGC 62.899 72.222 0.00 0.00 0.00 4.09
2365 2469 3.461773 ACCACGCCATCCCGAGAG 61.462 66.667 0.00 0.00 0.00 3.20
2366 2470 3.770040 CACCACGCCATCCCGAGA 61.770 66.667 0.00 0.00 0.00 4.04
2367 2471 2.717044 TACACCACGCCATCCCGAG 61.717 63.158 0.00 0.00 0.00 4.63
2368 2472 2.680707 TACACCACGCCATCCCGA 60.681 61.111 0.00 0.00 0.00 5.14
2369 2473 2.510691 GTACACCACGCCATCCCG 60.511 66.667 0.00 0.00 0.00 5.14
2370 2474 2.124860 GGTACACCACGCCATCCC 60.125 66.667 0.00 0.00 35.64 3.85
2371 2475 0.322187 AAAGGTACACCACGCCATCC 60.322 55.000 0.38 0.00 38.89 3.51
2394 2498 3.704566 ACTACACACCACACTCTCTCAAA 59.295 43.478 0.00 0.00 0.00 2.69
2395 2499 3.068165 CACTACACACCACACTCTCTCAA 59.932 47.826 0.00 0.00 0.00 3.02
2396 2500 2.623416 CACTACACACCACACTCTCTCA 59.377 50.000 0.00 0.00 0.00 3.27
2397 2501 2.029828 CCACTACACACCACACTCTCTC 60.030 54.545 0.00 0.00 0.00 3.20
2403 2642 1.495584 CGCACCACTACACACCACAC 61.496 60.000 0.00 0.00 0.00 3.82
2404 2643 1.227409 CGCACCACTACACACCACA 60.227 57.895 0.00 0.00 0.00 4.17
2406 2645 1.227409 CACGCACCACTACACACCA 60.227 57.895 0.00 0.00 0.00 4.17
2408 2647 2.935955 GCACGCACCACTACACAC 59.064 61.111 0.00 0.00 0.00 3.82
2427 2666 0.107456 CCCATCCCGATCACTCAAGG 59.893 60.000 0.00 0.00 0.00 3.61
2430 2669 0.982852 AAGCCCATCCCGATCACTCA 60.983 55.000 0.00 0.00 0.00 3.41
2431 2670 0.533755 CAAGCCCATCCCGATCACTC 60.534 60.000 0.00 0.00 0.00 3.51
2432 2671 0.982852 TCAAGCCCATCCCGATCACT 60.983 55.000 0.00 0.00 0.00 3.41
2433 2672 0.109342 ATCAAGCCCATCCCGATCAC 59.891 55.000 0.00 0.00 0.00 3.06
2434 2673 0.846015 AATCAAGCCCATCCCGATCA 59.154 50.000 0.00 0.00 0.00 2.92
2435 2674 1.202806 TCAATCAAGCCCATCCCGATC 60.203 52.381 0.00 0.00 0.00 3.69
2436 2675 0.846015 TCAATCAAGCCCATCCCGAT 59.154 50.000 0.00 0.00 0.00 4.18
2438 2677 0.740737 GTTCAATCAAGCCCATCCCG 59.259 55.000 0.00 0.00 0.00 5.14
2439 2678 0.740737 CGTTCAATCAAGCCCATCCC 59.259 55.000 0.00 0.00 0.00 3.85
2449 2688 0.250684 TGCTGGGCTTCGTTCAATCA 60.251 50.000 0.00 0.00 0.00 2.57
2450 2689 0.881118 TTGCTGGGCTTCGTTCAATC 59.119 50.000 0.00 0.00 0.00 2.67
2455 2694 2.555547 GCTGTTGCTGGGCTTCGTT 61.556 57.895 0.00 0.00 36.03 3.85
2456 2695 2.980233 GCTGTTGCTGGGCTTCGT 60.980 61.111 0.00 0.00 36.03 3.85
2457 2696 2.554636 TTGCTGTTGCTGGGCTTCG 61.555 57.895 0.00 0.00 40.48 3.79
2458 2697 1.006922 GTTGCTGTTGCTGGGCTTC 60.007 57.895 0.00 0.00 40.48 3.86
2459 2698 1.741327 CTGTTGCTGTTGCTGGGCTT 61.741 55.000 0.00 0.00 40.48 4.35
2460 2699 2.123769 TGTTGCTGTTGCTGGGCT 60.124 55.556 0.00 0.00 40.48 5.19
2461 2700 2.337532 CTGTTGCTGTTGCTGGGC 59.662 61.111 0.00 0.00 40.48 5.36
2463 2702 0.313043 CTTCCTGTTGCTGTTGCTGG 59.687 55.000 0.00 0.00 40.48 4.85
2464 2703 1.002033 GACTTCCTGTTGCTGTTGCTG 60.002 52.381 0.00 0.00 40.48 4.41
2465 2704 1.312815 GACTTCCTGTTGCTGTTGCT 58.687 50.000 0.00 0.00 40.48 3.91
2466 2705 1.024271 TGACTTCCTGTTGCTGTTGC 58.976 50.000 0.00 0.00 40.20 4.17
2468 2707 2.233271 CCATGACTTCCTGTTGCTGTT 58.767 47.619 0.00 0.00 0.00 3.16
2469 2708 1.546323 CCCATGACTTCCTGTTGCTGT 60.546 52.381 0.00 0.00 0.00 4.40
2475 2729 1.488705 TTCGGCCCATGACTTCCTGT 61.489 55.000 0.00 0.00 0.00 4.00
2476 2730 0.322456 TTTCGGCCCATGACTTCCTG 60.322 55.000 0.00 0.00 0.00 3.86
2482 2736 1.063469 CACGTTATTTCGGCCCATGAC 59.937 52.381 0.00 0.00 34.94 3.06
2492 2746 3.424962 GCAGCTTCAGTCCACGTTATTTC 60.425 47.826 0.00 0.00 0.00 2.17
2497 2751 1.146041 TGCAGCTTCAGTCCACGTT 59.854 52.632 0.00 0.00 0.00 3.99
2500 2754 1.287730 CTCGTGCAGCTTCAGTCCAC 61.288 60.000 0.00 0.00 0.00 4.02
2524 2791 2.202623 CGGTCGCTAGTGGTGCTC 60.203 66.667 2.90 0.00 0.00 4.26
2527 2794 1.443872 GTCACGGTCGCTAGTGGTG 60.444 63.158 2.90 4.25 38.77 4.17
2528 2795 1.584380 GAGTCACGGTCGCTAGTGGT 61.584 60.000 2.90 0.00 38.77 4.16
2548 2842 2.896801 GCTGGCTGGTTCGTGTGTG 61.897 63.158 0.00 0.00 0.00 3.82
2550 2844 3.716006 CGCTGGCTGGTTCGTGTG 61.716 66.667 0.00 0.00 0.00 3.82
2551 2845 3.923864 TCGCTGGCTGGTTCGTGT 61.924 61.111 0.00 0.00 0.00 4.49
2552 2846 3.414700 GTCGCTGGCTGGTTCGTG 61.415 66.667 0.00 0.00 0.00 4.35
2554 2848 2.664851 TTGTCGCTGGCTGGTTCG 60.665 61.111 0.00 0.00 0.00 3.95
2562 2857 0.179121 TAGGCATACGTTGTCGCTGG 60.179 55.000 0.00 0.00 41.18 4.85
2576 2871 3.259876 AGAAGGATTTGTACACGTAGGCA 59.740 43.478 0.00 0.00 0.00 4.75
2579 2874 3.303495 CGCAGAAGGATTTGTACACGTAG 59.697 47.826 0.00 0.00 0.00 3.51
2583 2878 1.804151 TGCGCAGAAGGATTTGTACAC 59.196 47.619 5.66 0.00 0.00 2.90
2597 2892 1.293924 CCTACCTTGATTCTGCGCAG 58.706 55.000 31.53 31.53 0.00 5.18
2601 2896 0.815615 CCGCCCTACCTTGATTCTGC 60.816 60.000 0.00 0.00 0.00 4.26
2604 2899 1.526225 GCCCGCCCTACCTTGATTC 60.526 63.158 0.00 0.00 0.00 2.52
2658 2953 1.410882 TGCATGACATGATGCCAATGG 59.589 47.619 19.76 0.00 46.98 3.16
2659 2954 2.100749 ACTGCATGACATGATGCCAATG 59.899 45.455 19.76 6.93 46.98 2.82
2660 2955 2.100749 CACTGCATGACATGATGCCAAT 59.899 45.455 19.76 0.00 46.98 3.16
2661 2956 1.474879 CACTGCATGACATGATGCCAA 59.525 47.619 19.76 0.00 46.98 4.52
2662 2957 1.099689 CACTGCATGACATGATGCCA 58.900 50.000 19.76 6.47 46.98 4.92
2663 2958 0.248907 GCACTGCATGACATGATGCC 60.249 55.000 19.76 1.81 46.98 4.40
2665 2960 2.797491 CTTGCACTGCATGACATGATG 58.203 47.619 19.76 13.64 38.76 3.07
2666 2961 1.134367 GCTTGCACTGCATGACATGAT 59.866 47.619 19.76 0.58 38.76 2.45
2667 2962 0.524414 GCTTGCACTGCATGACATGA 59.476 50.000 19.76 3.77 38.76 3.07
2668 2963 0.526211 AGCTTGCACTGCATGACATG 59.474 50.000 18.59 11.27 38.76 3.21
2669 2964 0.526211 CAGCTTGCACTGCATGACAT 59.474 50.000 18.59 3.27 38.76 3.06
2670 2965 1.520600 CCAGCTTGCACTGCATGACA 61.521 55.000 18.59 0.00 38.76 3.58
2671 2966 1.211969 CCAGCTTGCACTGCATGAC 59.788 57.895 18.59 10.76 38.76 3.06
2730 3025 5.305585 CCTAATATGCCGGTCATAACAACT 58.694 41.667 18.34 3.80 40.73 3.16
2731 3026 4.454504 CCCTAATATGCCGGTCATAACAAC 59.545 45.833 18.34 0.00 40.73 3.32
2786 5714 5.312079 GGCTAAGTCCCTAGTAACGATAGA 58.688 45.833 0.00 0.00 41.38 1.98
2787 5715 4.458642 GGGCTAAGTCCCTAGTAACGATAG 59.541 50.000 0.00 0.00 43.13 2.08
2796 5724 6.441088 AAGATAATTGGGCTAAGTCCCTAG 57.559 41.667 0.12 0.00 46.67 3.02
2890 5818 6.602406 ACTGATTGCTTCTTGCTTGATTAGAT 59.398 34.615 0.00 0.00 43.37 1.98
2911 5839 1.406887 GGGAAGCCGAGCAAATACTGA 60.407 52.381 0.00 0.00 0.00 3.41
2948 5876 0.325390 AAGAGGCGGCTAGGGTTAGT 60.325 55.000 13.24 0.00 0.00 2.24
3024 5952 4.719106 AGACGAGGTCGAGGGCGT 62.719 66.667 6.35 6.14 43.02 5.68
3069 5997 1.262640 GGGTTCTGCCGGTTCTAGGA 61.263 60.000 1.90 0.00 38.44 2.94
3094 6022 5.330455 CAGATACAAGACTGCTGTTAGGA 57.670 43.478 0.00 0.00 0.00 2.94
3144 6072 5.694995 AGCAAGCACATTATTATGGGTAGT 58.305 37.500 0.00 0.00 37.50 2.73
3187 7358 6.707440 TTCATCAACAACCTACACATTTGT 57.293 33.333 0.00 0.00 40.02 2.83
3207 7382 6.582677 TTTTCTTTTGTCACACCTCTTTCA 57.417 33.333 0.00 0.00 0.00 2.69
3257 7432 1.074405 TGAACTTGCCTGGAAGAGCAT 59.926 47.619 5.36 0.00 39.31 3.79
3261 7436 3.072915 TGAATCTGAACTTGCCTGGAAGA 59.927 43.478 5.36 0.00 34.07 2.87
3308 7485 7.448161 TCATCACCATGTAATCAAACTTGACTT 59.552 33.333 0.00 0.00 40.49 3.01
3322 7499 4.860802 ACCCTCAAATCATCACCATGTA 57.139 40.909 0.00 0.00 0.00 2.29
3350 7527 6.319658 CCATGTAAGATTGCTAAACATCAGGT 59.680 38.462 0.00 0.00 31.89 4.00
3428 7605 9.153721 GCATTGAAATAACATCCTGATGAAAAA 57.846 29.630 13.81 0.00 41.20 1.94
3584 7761 4.403113 TGGGGGTGACTAAAAACAAGAAAC 59.597 41.667 0.00 0.00 0.00 2.78
3607 7784 4.403432 CCAGACTGTGCCCAATTATTGAAT 59.597 41.667 6.50 0.00 0.00 2.57
3625 7802 2.216898 GCAAGCCACTCATATCCAGAC 58.783 52.381 0.00 0.00 0.00 3.51
3672 7849 4.370364 TCAGTTTCTTTTTGCTCGCTTT 57.630 36.364 0.00 0.00 0.00 3.51
3716 7893 7.101054 CCATCATGTTTCAGAATTCAATGGTT 58.899 34.615 8.44 0.00 0.00 3.67
3749 7926 3.473147 ATGCACAGAGTCAGCATCC 57.527 52.632 10.73 0.00 45.11 3.51
3760 7937 0.039256 CAAAACACCGGGATGCACAG 60.039 55.000 6.32 0.00 0.00 3.66
3765 7942 2.295909 ACATCAACAAAACACCGGGATG 59.704 45.455 6.32 8.19 37.33 3.51
3771 7948 4.104776 CACTCACACATCAACAAAACACC 58.895 43.478 0.00 0.00 0.00 4.16
3772 7949 3.547468 GCACTCACACATCAACAAAACAC 59.453 43.478 0.00 0.00 0.00 3.32
3878 8061 9.435688 CCAGGCTTTTAGCAATAACTTAAATTT 57.564 29.630 0.00 0.00 44.75 1.82
3880 8063 8.134202 ACCAGGCTTTTAGCAATAACTTAAAT 57.866 30.769 0.67 0.00 44.75 1.40
3883 8067 6.946009 AGAACCAGGCTTTTAGCAATAACTTA 59.054 34.615 0.67 0.00 44.75 2.24
3889 8073 4.039603 AGAGAACCAGGCTTTTAGCAAT 57.960 40.909 0.67 0.00 44.75 3.56
4180 8384 1.499056 GTGCGCACTGGAGTTCATG 59.501 57.895 32.55 0.00 0.00 3.07
4193 8397 1.076332 AGAAATCTTACACCGTGCGC 58.924 50.000 0.00 0.00 0.00 6.09
4246 8450 3.002965 TCACGGACTACATACACATAGCG 59.997 47.826 0.00 0.00 0.00 4.26
4332 8537 8.356657 CCATGACTTTAAAACATCACCACTTAA 58.643 33.333 0.00 0.00 0.00 1.85
4425 8634 3.054802 CCTCATAGACTGGCAGTTCCTTT 60.055 47.826 22.98 7.51 35.26 3.11
4471 8687 6.471198 GTGATGTGTGCATTATTGATTCACAG 59.529 38.462 7.04 0.00 38.19 3.66
4511 8727 2.175202 GGCCACAATCCAAACATACCA 58.825 47.619 0.00 0.00 0.00 3.25
4512 8728 2.175202 TGGCCACAATCCAAACATACC 58.825 47.619 0.00 0.00 0.00 2.73
4513 8729 3.951775 TTGGCCACAATCCAAACATAC 57.048 42.857 3.88 0.00 40.35 2.39
4514 8730 3.900601 ACTTTGGCCACAATCCAAACATA 59.099 39.130 3.88 0.00 45.60 2.29
4516 8732 2.114616 ACTTTGGCCACAATCCAAACA 58.885 42.857 3.88 0.00 45.60 2.83
4517 8733 2.482864 CACTTTGGCCACAATCCAAAC 58.517 47.619 3.88 0.00 45.60 2.93
4519 8735 0.392336 GCACTTTGGCCACAATCCAA 59.608 50.000 3.88 0.00 41.47 3.53
4520 8736 0.758310 TGCACTTTGGCCACAATCCA 60.758 50.000 3.88 0.00 36.29 3.41
4521 8737 0.319813 GTGCACTTTGGCCACAATCC 60.320 55.000 3.88 0.00 36.29 3.01
4522 8738 0.319813 GGTGCACTTTGGCCACAATC 60.320 55.000 17.98 0.00 36.29 2.67
4523 8739 1.747774 GGTGCACTTTGGCCACAAT 59.252 52.632 17.98 0.00 36.29 2.71
4524 8740 2.430610 GGGTGCACTTTGGCCACAA 61.431 57.895 17.98 2.15 34.07 3.33
4525 8741 2.000825 TAGGGTGCACTTTGGCCACA 62.001 55.000 17.98 0.00 0.00 4.17
4526 8742 1.228429 TAGGGTGCACTTTGGCCAC 60.228 57.895 17.98 0.00 0.00 5.01
4527 8743 1.228429 GTAGGGTGCACTTTGGCCA 60.228 57.895 17.98 0.00 0.00 5.36
4528 8744 1.977009 GGTAGGGTGCACTTTGGCC 60.977 63.158 17.98 8.97 0.00 5.36
4529 8745 0.825840 TTGGTAGGGTGCACTTTGGC 60.826 55.000 17.98 0.00 0.00 4.52
4530 8746 1.698506 TTTGGTAGGGTGCACTTTGG 58.301 50.000 17.98 0.00 0.00 3.28
4531 8747 4.335400 AATTTTGGTAGGGTGCACTTTG 57.665 40.909 17.98 0.00 0.00 2.77
4532 8748 5.122519 CAAAATTTTGGTAGGGTGCACTTT 58.877 37.500 21.00 7.82 34.59 2.66
4533 8749 4.702831 CAAAATTTTGGTAGGGTGCACTT 58.297 39.130 21.00 8.20 34.59 3.16
4534 8750 4.335400 CAAAATTTTGGTAGGGTGCACT 57.665 40.909 21.00 0.00 34.59 4.40
4555 8771 1.256812 CCAACCTTTGGGTCATGACC 58.743 55.000 33.14 33.14 46.67 4.02
4565 8781 5.163673 CCATCCAAACAAAAACCAACCTTTG 60.164 40.000 0.00 0.00 38.29 2.77
4566 8782 4.946772 CCATCCAAACAAAAACCAACCTTT 59.053 37.500 0.00 0.00 0.00 3.11
4567 8783 4.018870 ACCATCCAAACAAAAACCAACCTT 60.019 37.500 0.00 0.00 0.00 3.50
4568 8784 3.521531 ACCATCCAAACAAAAACCAACCT 59.478 39.130 0.00 0.00 0.00 3.50
4569 8785 3.879998 ACCATCCAAACAAAAACCAACC 58.120 40.909 0.00 0.00 0.00 3.77
4570 8786 4.438065 GCAACCATCCAAACAAAAACCAAC 60.438 41.667 0.00 0.00 0.00 3.77
4571 8787 3.691609 GCAACCATCCAAACAAAAACCAA 59.308 39.130 0.00 0.00 0.00 3.67
4572 8788 3.274288 GCAACCATCCAAACAAAAACCA 58.726 40.909 0.00 0.00 0.00 3.67
4573 8789 2.616376 GGCAACCATCCAAACAAAAACC 59.384 45.455 0.00 0.00 0.00 3.27
4574 8790 3.274288 TGGCAACCATCCAAACAAAAAC 58.726 40.909 0.00 0.00 0.00 2.43
4575 8791 3.634397 TGGCAACCATCCAAACAAAAA 57.366 38.095 0.00 0.00 0.00 1.94
4576 8792 3.634397 TTGGCAACCATCCAAACAAAA 57.366 38.095 0.00 0.00 40.35 2.44
4577 8793 3.853355 ATTGGCAACCATCCAAACAAA 57.147 38.095 0.00 0.00 45.63 2.83
4578 8794 3.853355 AATTGGCAACCATCCAAACAA 57.147 38.095 0.00 0.00 45.63 2.83
4579 8795 3.118112 ACAAATTGGCAACCATCCAAACA 60.118 39.130 0.00 0.00 45.63 2.83
4580 8796 3.475575 ACAAATTGGCAACCATCCAAAC 58.524 40.909 0.00 0.00 45.63 2.93
4581 8797 3.853355 ACAAATTGGCAACCATCCAAA 57.147 38.095 0.00 0.00 45.63 3.28
4582 8798 3.474600 CAACAAATTGGCAACCATCCAA 58.525 40.909 0.00 0.00 46.44 3.53
4583 8799 2.809665 GCAACAAATTGGCAACCATCCA 60.810 45.455 0.00 0.00 36.23 3.41
4584 8800 1.805943 GCAACAAATTGGCAACCATCC 59.194 47.619 0.00 0.00 36.23 3.51
4600 8816 1.547372 AGAGTTCATTGGCATGGCAAC 59.453 47.619 34.01 22.87 0.00 4.17
4601 8817 1.927487 AGAGTTCATTGGCATGGCAA 58.073 45.000 33.51 33.51 0.00 4.52
4602 8818 2.646930 CTAGAGTTCATTGGCATGGCA 58.353 47.619 19.43 19.43 0.00 4.92
4603 8819 1.336125 GCTAGAGTTCATTGGCATGGC 59.664 52.381 13.29 13.29 0.00 4.40
4604 8820 1.952296 GGCTAGAGTTCATTGGCATGG 59.048 52.381 0.00 0.00 0.00 3.66
4605 8821 2.646930 TGGCTAGAGTTCATTGGCATG 58.353 47.619 0.00 0.00 0.00 4.06
4606 8822 3.370840 TTGGCTAGAGTTCATTGGCAT 57.629 42.857 0.00 0.00 33.41 4.40
4607 8823 2.877097 TTGGCTAGAGTTCATTGGCA 57.123 45.000 0.00 0.00 0.00 4.92
4608 8824 3.950395 AGAATTGGCTAGAGTTCATTGGC 59.050 43.478 0.00 0.00 0.00 4.52
4609 8825 7.814264 ATTAGAATTGGCTAGAGTTCATTGG 57.186 36.000 0.00 0.00 0.00 3.16
4621 8837 9.166173 GGCAAGAAAAATAAATTAGAATTGGCT 57.834 29.630 0.00 0.00 36.78 4.75
4622 8838 8.945057 TGGCAAGAAAAATAAATTAGAATTGGC 58.055 29.630 0.00 0.00 39.21 4.52
4647 8863 3.264104 GCCCATGATTTGACCAACATTG 58.736 45.455 0.00 0.00 0.00 2.82
4648 8864 2.905085 TGCCCATGATTTGACCAACATT 59.095 40.909 0.00 0.00 0.00 2.71
4649 8865 2.538222 TGCCCATGATTTGACCAACAT 58.462 42.857 0.00 0.00 0.00 2.71
4650 8866 2.006805 TGCCCATGATTTGACCAACA 57.993 45.000 0.00 0.00 0.00 3.33
4651 8867 3.055963 TGATTGCCCATGATTTGACCAAC 60.056 43.478 0.00 0.00 0.00 3.77
4652 8868 3.171528 TGATTGCCCATGATTTGACCAA 58.828 40.909 0.00 0.00 0.00 3.67
4653 8869 2.817665 TGATTGCCCATGATTTGACCA 58.182 42.857 0.00 0.00 0.00 4.02
4654 8870 3.891422 TTGATTGCCCATGATTTGACC 57.109 42.857 0.00 0.00 0.00 4.02
4655 8871 4.392754 GGTTTTGATTGCCCATGATTTGAC 59.607 41.667 0.00 0.00 0.00 3.18
4656 8872 4.286549 AGGTTTTGATTGCCCATGATTTGA 59.713 37.500 0.00 0.00 0.00 2.69
4657 8873 4.581868 AGGTTTTGATTGCCCATGATTTG 58.418 39.130 0.00 0.00 0.00 2.32
4658 8874 4.286549 TGAGGTTTTGATTGCCCATGATTT 59.713 37.500 0.00 0.00 0.00 2.17
4659 8875 3.839490 TGAGGTTTTGATTGCCCATGATT 59.161 39.130 0.00 0.00 0.00 2.57
4660 8876 3.443052 TGAGGTTTTGATTGCCCATGAT 58.557 40.909 0.00 0.00 0.00 2.45
4661 8877 2.886913 TGAGGTTTTGATTGCCCATGA 58.113 42.857 0.00 0.00 0.00 3.07
4662 8878 3.328505 GTTGAGGTTTTGATTGCCCATG 58.671 45.455 0.00 0.00 0.00 3.66
4663 8879 2.302733 GGTTGAGGTTTTGATTGCCCAT 59.697 45.455 0.00 0.00 0.00 4.00
4664 8880 1.691434 GGTTGAGGTTTTGATTGCCCA 59.309 47.619 0.00 0.00 0.00 5.36
4665 8881 1.691434 TGGTTGAGGTTTTGATTGCCC 59.309 47.619 0.00 0.00 0.00 5.36
4666 8882 3.467374 TTGGTTGAGGTTTTGATTGCC 57.533 42.857 0.00 0.00 0.00 4.52
4667 8883 7.671495 AAATATTGGTTGAGGTTTTGATTGC 57.329 32.000 0.00 0.00 0.00 3.56
4692 8908 3.088532 CCAACAAAGTATTGGCTAGCCA 58.911 45.455 32.88 32.88 45.63 4.75
4693 8909 2.427095 CCCAACAAAGTATTGGCTAGCC 59.573 50.000 27.71 27.71 44.57 3.93
4694 8910 2.427095 CCCCAACAAAGTATTGGCTAGC 59.573 50.000 6.04 6.04 44.57 3.42
4695 8911 2.427095 GCCCCAACAAAGTATTGGCTAG 59.573 50.000 0.00 0.00 44.57 3.42
4696 8912 2.225142 TGCCCCAACAAAGTATTGGCTA 60.225 45.455 0.00 0.00 44.57 3.93
4697 8913 1.266178 GCCCCAACAAAGTATTGGCT 58.734 50.000 0.00 0.00 44.57 4.75
4698 8914 0.972883 TGCCCCAACAAAGTATTGGC 59.027 50.000 0.00 0.00 44.57 4.52
4699 8915 2.289382 GGTTGCCCCAACAAAGTATTGG 60.289 50.000 9.93 0.00 45.11 3.16
4700 8916 2.632512 AGGTTGCCCCAACAAAGTATTG 59.367 45.455 9.93 0.00 45.11 1.90
4701 8917 2.970987 AGGTTGCCCCAACAAAGTATT 58.029 42.857 9.93 0.00 45.11 1.89
4702 8918 2.632512 CAAGGTTGCCCCAACAAAGTAT 59.367 45.455 9.93 0.00 45.11 2.12
4703 8919 2.035632 CAAGGTTGCCCCAACAAAGTA 58.964 47.619 9.93 0.00 45.11 2.24
4704 8920 0.829990 CAAGGTTGCCCCAACAAAGT 59.170 50.000 9.93 0.00 45.11 2.66
4705 8921 0.106521 CCAAGGTTGCCCCAACAAAG 59.893 55.000 9.93 0.00 45.11 2.77
4706 8922 1.341156 CCCAAGGTTGCCCCAACAAA 61.341 55.000 9.93 0.00 45.11 2.83
4707 8923 1.764054 CCCAAGGTTGCCCCAACAA 60.764 57.895 9.93 0.00 45.11 2.83
4708 8924 2.123077 CCCAAGGTTGCCCCAACA 60.123 61.111 9.93 0.00 45.11 3.33
4709 8925 3.625897 GCCCAAGGTTGCCCCAAC 61.626 66.667 0.00 0.00 42.89 3.77
4710 8926 2.099251 TATGCCCAAGGTTGCCCCAA 62.099 55.000 0.00 0.00 34.66 4.12
4711 8927 2.099251 TTATGCCCAAGGTTGCCCCA 62.099 55.000 0.00 0.00 34.66 4.96
4712 8928 0.907230 TTTATGCCCAAGGTTGCCCC 60.907 55.000 0.00 0.00 0.00 5.80
4713 8929 0.249120 GTTTATGCCCAAGGTTGCCC 59.751 55.000 0.00 0.00 0.00 5.36
4714 8930 0.249120 GGTTTATGCCCAAGGTTGCC 59.751 55.000 0.00 0.00 0.00 4.52
4715 8931 0.972883 TGGTTTATGCCCAAGGTTGC 59.027 50.000 0.00 0.00 0.00 4.17
4716 8932 3.181461 TGTTTGGTTTATGCCCAAGGTTG 60.181 43.478 0.00 0.00 42.63 3.77
4717 8933 3.041946 TGTTTGGTTTATGCCCAAGGTT 58.958 40.909 0.00 0.00 42.63 3.50
4718 8934 2.367241 GTGTTTGGTTTATGCCCAAGGT 59.633 45.455 0.00 0.00 42.63 3.50
4719 8935 2.366916 TGTGTTTGGTTTATGCCCAAGG 59.633 45.455 0.00 0.00 42.63 3.61
4720 8936 3.389221 GTGTGTTTGGTTTATGCCCAAG 58.611 45.455 0.00 0.00 42.63 3.61
4721 8937 2.103263 GGTGTGTTTGGTTTATGCCCAA 59.897 45.455 0.00 0.00 40.15 4.12
4722 8938 1.689273 GGTGTGTTTGGTTTATGCCCA 59.311 47.619 0.00 0.00 0.00 5.36
4723 8939 1.001520 GGGTGTGTTTGGTTTATGCCC 59.998 52.381 0.00 0.00 0.00 5.36
4724 8940 1.336424 CGGGTGTGTTTGGTTTATGCC 60.336 52.381 0.00 0.00 0.00 4.40
4725 8941 1.338655 ACGGGTGTGTTTGGTTTATGC 59.661 47.619 0.00 0.00 0.00 3.14
4726 8942 3.564644 TGTACGGGTGTGTTTGGTTTATG 59.435 43.478 0.00 0.00 0.00 1.90
4727 8943 3.565063 GTGTACGGGTGTGTTTGGTTTAT 59.435 43.478 0.00 0.00 0.00 1.40
4728 8944 2.941720 GTGTACGGGTGTGTTTGGTTTA 59.058 45.455 0.00 0.00 0.00 2.01
4729 8945 1.744522 GTGTACGGGTGTGTTTGGTTT 59.255 47.619 0.00 0.00 0.00 3.27
4730 8946 1.339824 TGTGTACGGGTGTGTTTGGTT 60.340 47.619 0.00 0.00 0.00 3.67
4731 8947 0.252479 TGTGTACGGGTGTGTTTGGT 59.748 50.000 0.00 0.00 0.00 3.67
4732 8948 1.265635 CATGTGTACGGGTGTGTTTGG 59.734 52.381 0.00 0.00 0.00 3.28
4733 8949 1.334599 GCATGTGTACGGGTGTGTTTG 60.335 52.381 0.00 0.00 0.00 2.93
4734 8950 0.948678 GCATGTGTACGGGTGTGTTT 59.051 50.000 0.00 0.00 0.00 2.83
4735 8951 0.107831 AGCATGTGTACGGGTGTGTT 59.892 50.000 0.00 0.00 0.00 3.32
4736 8952 0.107831 AAGCATGTGTACGGGTGTGT 59.892 50.000 0.00 0.00 0.00 3.72
4737 8953 1.234821 AAAGCATGTGTACGGGTGTG 58.765 50.000 0.00 0.00 0.00 3.82
4738 8954 1.975660 AAAAGCATGTGTACGGGTGT 58.024 45.000 0.00 0.00 0.00 4.16
4739 8955 3.071479 AGTAAAAGCATGTGTACGGGTG 58.929 45.455 0.00 0.00 0.00 4.61
4740 8956 3.412237 AGTAAAAGCATGTGTACGGGT 57.588 42.857 0.00 0.00 0.00 5.28
4741 8957 4.379082 GGAAAGTAAAAGCATGTGTACGGG 60.379 45.833 0.00 0.00 0.00 5.28
4742 8958 4.214545 TGGAAAGTAAAAGCATGTGTACGG 59.785 41.667 0.00 0.00 0.00 4.02
4743 8959 5.049680 ACTGGAAAGTAAAAGCATGTGTACG 60.050 40.000 0.00 0.00 0.00 3.67
4775 8991 7.447430 CCGCTTTATTTTCATCATTGTTGTTC 58.553 34.615 0.00 0.00 0.00 3.18
4793 9009 4.275689 CCTATGATTGACATTGCCGCTTTA 59.724 41.667 0.00 0.00 40.07 1.85
4806 9022 1.286501 GCGTTGCGTCCTATGATTGA 58.713 50.000 0.00 0.00 0.00 2.57
4816 9032 0.863144 TTAAGGTCTTGCGTTGCGTC 59.137 50.000 0.00 0.00 0.00 5.19
4940 9158 7.572523 TCAACATTCCATGGCTATTTCTAAG 57.427 36.000 6.96 0.00 33.60 2.18
5016 9473 7.504926 AAATCAACTAGTTATGGGGTGTCTA 57.495 36.000 8.04 0.00 0.00 2.59
5062 9519 4.032104 GCAAGAATTTATTTGAGCGCTTGG 59.968 41.667 13.26 0.00 33.88 3.61
5067 9524 6.464895 TTTTGGCAAGAATTTATTTGAGCG 57.535 33.333 0.00 0.00 0.00 5.03
5190 9651 1.325640 CTGTGCGTCTGATGTATGTGC 59.674 52.381 0.00 0.00 0.00 4.57
5306 9768 2.152016 GCTAGGAAGTTGGTGTGTTCC 58.848 52.381 0.00 0.00 40.19 3.62
5307 9769 2.548480 GTGCTAGGAAGTTGGTGTGTTC 59.452 50.000 0.00 0.00 0.00 3.18
5320 9782 3.630312 GTGTTGGTTTTTCAGTGCTAGGA 59.370 43.478 0.00 0.00 0.00 2.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.