Multiple sequence alignment - TraesCS4A01G129600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G129600 chr4A 100.000 4225 0 0 1 4225 169900129 169904353 0.000000e+00 7803.0
1 TraesCS4A01G129600 chr4A 92.090 177 11 2 3633 3806 732790191 732790015 3.260000e-61 246.0
2 TraesCS4A01G129600 chr4A 97.368 114 2 1 2266 2378 403385769 403385882 4.310000e-45 193.0
3 TraesCS4A01G129600 chr4D 94.753 1620 39 9 664 2268 307275340 307273752 0.000000e+00 2479.0
4 TraesCS4A01G129600 chr4D 95.479 1283 31 4 2370 3628 307273755 307272476 0.000000e+00 2023.0
5 TraesCS4A01G129600 chr4D 91.611 596 41 5 1 594 307278002 307277414 0.000000e+00 815.0
6 TraesCS4A01G129600 chr4D 84.979 233 31 4 14 244 380347330 380347100 2.540000e-57 233.0
7 TraesCS4A01G129600 chr4B 93.548 1519 48 21 705 2202 383657156 383655667 0.000000e+00 2217.0
8 TraesCS4A01G129600 chr4B 94.716 1287 33 8 2370 3628 383655640 383654361 0.000000e+00 1967.0
9 TraesCS4A01G129600 chr4B 89.526 401 35 3 1 400 383662796 383662402 6.310000e-138 501.0
10 TraesCS4A01G129600 chr4B 88.030 401 36 7 3823 4220 302741078 302741469 8.270000e-127 464.0
11 TraesCS4A01G129600 chr7A 89.082 403 35 5 3823 4222 579566146 579565750 3.800000e-135 492.0
12 TraesCS4A01G129600 chr7A 97.391 115 2 1 2264 2377 609518901 609519015 1.200000e-45 195.0
13 TraesCS4A01G129600 chr1A 89.055 402 34 5 3823 4221 581867096 581866702 1.370000e-134 490.0
14 TraesCS4A01G129600 chr6A 89.169 397 33 6 3828 4222 575142402 575142014 1.770000e-133 486.0
15 TraesCS4A01G129600 chr6A 98.214 112 2 0 2265 2376 535140215 535140104 3.330000e-46 196.0
16 TraesCS4A01G129600 chr7B 88.177 406 39 5 3823 4225 3362644 3362245 3.820000e-130 475.0
17 TraesCS4A01G129600 chr3A 88.279 401 38 5 3824 4222 1917926 1918319 4.940000e-129 472.0
18 TraesCS4A01G129600 chr3A 99.091 110 1 0 2265 2374 19299540 19299649 9.270000e-47 198.0
19 TraesCS4A01G129600 chr3A 97.368 114 2 1 2260 2373 308676030 308675918 4.310000e-45 193.0
20 TraesCS4A01G129600 chr3A 96.491 114 4 0 2260 2373 152176490 152176377 5.580000e-44 189.0
21 TraesCS4A01G129600 chr5D 88.089 403 39 5 3821 4220 532339685 532340081 1.780000e-128 470.0
22 TraesCS4A01G129600 chr5B 88.030 401 37 5 3824 4221 34896308 34896700 8.270000e-127 464.0
23 TraesCS4A01G129600 chr5A 87.750 400 39 6 3824 4221 667931034 667930643 3.850000e-125 459.0
24 TraesCS4A01G129600 chr5A 93.567 171 10 1 3628 3797 382566632 382566802 1.950000e-63 254.0
25 TraesCS4A01G129600 chr5A 96.552 116 3 1 2265 2379 4707666 4707551 1.550000e-44 191.0
26 TraesCS4A01G129600 chr7D 94.611 167 8 1 3634 3799 69592824 69592658 1.510000e-64 257.0
27 TraesCS4A01G129600 chr2D 93.143 175 11 1 3632 3805 554128375 554128201 5.420000e-64 255.0
28 TraesCS4A01G129600 chr6D 94.048 168 9 1 3634 3800 167211839 167211672 1.950000e-63 254.0
29 TraesCS4A01G129600 chr6D 93.064 173 10 2 3630 3800 315624178 315624006 7.010000e-63 252.0
30 TraesCS4A01G129600 chr6D 93.064 173 10 2 3630 3801 392897142 392896971 7.010000e-63 252.0
31 TraesCS4A01G129600 chr2B 93.023 172 11 1 3627 3797 594834046 594833875 2.520000e-62 250.0
32 TraesCS4A01G129600 chr1D 91.209 182 15 1 3618 3798 206955521 206955702 3.260000e-61 246.0
33 TraesCS4A01G129600 chr1B 74.819 552 117 17 1 536 534163190 534163735 3.290000e-56 230.0
34 TraesCS4A01G129600 chr6B 97.345 113 3 0 2261 2373 62119241 62119353 4.310000e-45 193.0
35 TraesCS4A01G129600 chr2A 97.368 114 2 1 2265 2377 722814114 722814001 4.310000e-45 193.0
36 TraesCS4A01G129600 chr2A 87.342 79 9 1 1 78 401187014 401186936 5.820000e-14 89.8
37 TraesCS4A01G129600 chr2A 87.671 73 8 1 7 78 403154861 403154789 2.710000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G129600 chr4A 169900129 169904353 4224 False 7803.000000 7803 100.000000 1 4225 1 chr4A.!!$F1 4224
1 TraesCS4A01G129600 chr4D 307272476 307278002 5526 True 1772.333333 2479 93.947667 1 3628 3 chr4D.!!$R2 3627
2 TraesCS4A01G129600 chr4B 383654361 383657156 2795 True 2092.000000 2217 94.132000 705 3628 2 chr4B.!!$R2 2923
3 TraesCS4A01G129600 chr1B 534163190 534163735 545 False 230.000000 230 74.819000 1 536 1 chr1B.!!$F1 535

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
726 2733 0.036875 AGGTCTTTGAGGAAAGCGGG 59.963 55.0 0.00 0.00 38.83 6.13 F
2279 4317 0.107017 TACCTACTCCCTCCGTTCGG 60.107 60.0 4.74 4.74 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2353 4391 0.038744 AGTACTCCCTCCGTTCGGAA 59.961 55.0 14.79 0.04 33.41 4.30 R
3808 5877 0.179073 CTCTCGTCAATTGCCCGGAT 60.179 55.0 0.73 0.00 0.00 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 9.458374 CGACATTTACCTTACAAGAAATTTTGT 57.542 29.630 1.41 1.41 43.34 2.83
76 77 2.037385 AGCAAGGGAGGAGAGAAAGT 57.963 50.000 0.00 0.00 0.00 2.66
83 84 1.447945 GAGGAGAGAAAGTGCCAAGC 58.552 55.000 0.00 0.00 0.00 4.01
93 94 1.388547 AGTGCCAAGCGAAACAGAAA 58.611 45.000 0.00 0.00 0.00 2.52
122 123 6.711277 TGAAGGTCTACATCAAGCTACAAAT 58.289 36.000 0.00 0.00 0.00 2.32
146 147 0.827368 AAACTCGAGATGGAGGAGGC 59.173 55.000 21.68 0.00 38.39 4.70
166 167 3.066203 GGCCGTTCAAAAGAAGAAGTTCA 59.934 43.478 5.50 0.00 34.82 3.18
184 185 2.427245 AAGATGGAGGAGGCCGTCG 61.427 63.158 0.00 0.00 46.39 5.12
198 199 2.159693 GGCCGTCGAAATGAAGAAGTTC 60.160 50.000 0.00 0.00 0.00 3.01
219 220 1.806542 GAGATTGAAGCGACCAAAGCA 59.193 47.619 0.00 0.00 37.01 3.91
226 227 1.082104 GCGACCAAAGCAAAGACCG 60.082 57.895 0.00 0.00 34.19 4.79
235 236 0.954452 AGCAAAGACCGGAGCAAAAG 59.046 50.000 9.46 0.00 0.00 2.27
270 272 1.899437 GCATGTCGGAGGAGGTGGAA 61.899 60.000 0.00 0.00 0.00 3.53
282 284 4.111577 AGGAGGTGGAAATCATGAAGGTA 58.888 43.478 0.00 0.00 0.00 3.08
302 304 2.681778 CCTGAGCGAGGTGTCCCT 60.682 66.667 0.00 0.00 46.66 4.20
322 324 0.915364 GAGGAGAAGGCCATGGTTCT 59.085 55.000 15.60 15.60 35.67 3.01
327 329 3.359950 GAGAAGGCCATGGTTCTTGAAT 58.640 45.455 21.60 10.95 33.04 2.57
351 353 5.040715 AGCAAAAAGAATTTCTCGAGCTC 57.959 39.130 7.81 2.73 37.28 4.09
352 354 3.842984 GCAAAAAGAATTTCTCGAGCTCG 59.157 43.478 30.03 30.03 37.28 5.03
353 355 4.377431 GCAAAAAGAATTTCTCGAGCTCGA 60.377 41.667 34.65 34.65 41.68 4.04
380 382 1.227380 CTATGGCCGAGAGCACCAC 60.227 63.158 0.00 0.00 46.50 4.16
390 392 3.009723 CGAGAGCACCACCATTTTGTAT 58.990 45.455 0.00 0.00 0.00 2.29
391 393 3.181507 CGAGAGCACCACCATTTTGTATG 60.182 47.826 0.00 0.00 0.00 2.39
392 394 2.493278 AGAGCACCACCATTTTGTATGC 59.507 45.455 0.00 0.00 32.45 3.14
393 395 2.493278 GAGCACCACCATTTTGTATGCT 59.507 45.455 0.00 0.00 40.58 3.79
394 396 2.231964 AGCACCACCATTTTGTATGCTG 59.768 45.455 0.00 0.00 38.04 4.41
406 408 2.549926 TGTATGCTGGCTTGTGTATCG 58.450 47.619 0.00 0.00 0.00 2.92
456 459 1.785768 TTTAAGCGCTCGCAAGTGTA 58.214 45.000 12.06 0.00 44.88 2.90
459 462 3.838795 GCGCTCGCAAGTGTACCG 61.839 66.667 9.59 0.00 41.49 4.02
483 486 1.443828 TGGCAAGTGTGTCAGCGTA 59.556 52.632 0.00 0.00 33.34 4.42
490 493 3.173668 AGTGTGTCAGCGTAAACTTGA 57.826 42.857 0.00 0.00 0.00 3.02
528 531 0.806102 ACATGTATGTCGGTCGCTGC 60.806 55.000 0.00 0.00 35.87 5.25
561 564 7.903431 GGCTAACATGACTAGTTTTTATGTTCG 59.097 37.037 21.46 18.30 40.96 3.95
573 576 7.430441 AGTTTTTATGTTCGTAGCAAATGGTT 58.570 30.769 0.00 0.00 0.00 3.67
618 1459 7.751348 GCGACATTATACTTAGATGTGAGGTAG 59.249 40.741 0.00 0.00 34.38 3.18
619 1460 9.000486 CGACATTATACTTAGATGTGAGGTAGA 58.000 37.037 0.00 0.00 34.38 2.59
673 2680 4.412528 ACTTTCCCTTACAAAGTGAGACCT 59.587 41.667 0.00 0.00 41.55 3.85
695 2702 1.376609 GCACATGTCGTGGGGAATCC 61.377 60.000 0.00 0.00 46.45 3.01
700 2707 1.153628 GTCGTGGGGAATCCGAGTG 60.154 63.158 0.00 0.00 38.76 3.51
726 2733 0.036875 AGGTCTTTGAGGAAAGCGGG 59.963 55.000 0.00 0.00 38.83 6.13
795 2802 1.556911 GATCTGGAGTGGAAAGAGGCA 59.443 52.381 0.00 0.00 0.00 4.75
811 2818 1.973812 GCAGTTCCTGGGTTCCTGC 60.974 63.158 10.43 10.43 41.37 4.85
812 2819 1.303643 CAGTTCCTGGGTTCCTGCC 60.304 63.158 0.00 0.00 0.00 4.85
813 2820 2.359975 GTTCCTGGGTTCCTGCCG 60.360 66.667 0.00 0.00 0.00 5.69
814 2821 4.344865 TTCCTGGGTTCCTGCCGC 62.345 66.667 0.00 0.00 0.00 6.53
1194 3221 0.947244 GCAGAAAATGCGATCCGGAT 59.053 50.000 19.21 19.21 46.99 4.18
1233 3260 1.198759 ACATGTACGACCTGCCCCTT 61.199 55.000 0.00 0.00 0.00 3.95
1794 3824 3.751246 CACGACCGGCCGACCTTA 61.751 66.667 30.73 0.00 0.00 2.69
1855 3885 6.543735 AGTACCCTTTGATGAAAGCTTACTT 58.456 36.000 0.00 0.00 37.80 2.24
1880 3910 7.826690 TGTTTTAGCTTAAGCAGGGAATTAAG 58.173 34.615 28.39 0.00 45.16 1.85
1971 4009 5.657474 TGTGTCGTTCCCTACATAGATTTC 58.343 41.667 0.00 0.00 0.00 2.17
1994 4032 6.547322 TCAGAATGTTTGCCATGTACTGGTC 61.547 44.000 11.47 6.21 42.06 4.02
1995 4033 8.657077 TCAGAATGTTTGCCATGTACTGGTCT 62.657 42.308 11.47 4.01 42.06 3.85
2002 4040 2.893637 CCATGTACTGGTCTGTAGCAC 58.106 52.381 0.00 0.00 40.49 4.40
2003 4041 2.530177 CATGTACTGGTCTGTAGCACG 58.470 52.381 0.00 0.00 0.00 5.34
2004 4042 1.900245 TGTACTGGTCTGTAGCACGA 58.100 50.000 0.00 0.00 0.00 4.35
2005 4043 2.443416 TGTACTGGTCTGTAGCACGAT 58.557 47.619 0.00 0.00 0.00 3.73
2006 4044 2.823747 TGTACTGGTCTGTAGCACGATT 59.176 45.455 0.00 0.00 0.00 3.34
2007 4045 3.257375 TGTACTGGTCTGTAGCACGATTT 59.743 43.478 0.00 0.00 0.00 2.17
2008 4046 2.688507 ACTGGTCTGTAGCACGATTTG 58.311 47.619 0.00 0.00 0.00 2.32
2051 4089 6.519679 TTTAGTCAGTAGCACGATCCTAAA 57.480 37.500 0.00 0.00 0.00 1.85
2059 4097 1.852895 GCACGATCCTAAACTAGCACG 59.147 52.381 0.00 0.00 0.00 5.34
2140 4178 3.380479 TTCTGGCTACGGGAAATATCG 57.620 47.619 0.00 0.00 0.00 2.92
2264 4302 5.760253 CACTTCTTTCATGTGACTGTTACCT 59.240 40.000 0.00 0.00 32.87 3.08
2265 4303 6.929049 CACTTCTTTCATGTGACTGTTACCTA 59.071 38.462 0.00 0.00 32.87 3.08
2266 4304 6.929606 ACTTCTTTCATGTGACTGTTACCTAC 59.070 38.462 0.00 0.00 0.00 3.18
2267 4305 6.665992 TCTTTCATGTGACTGTTACCTACT 57.334 37.500 0.00 0.00 0.00 2.57
2268 4306 6.688578 TCTTTCATGTGACTGTTACCTACTC 58.311 40.000 0.00 0.00 0.00 2.59
2269 4307 5.401531 TTCATGTGACTGTTACCTACTCC 57.598 43.478 0.00 0.00 0.00 3.85
2270 4308 3.767673 TCATGTGACTGTTACCTACTCCC 59.232 47.826 0.00 0.00 0.00 4.30
2271 4309 3.537795 TGTGACTGTTACCTACTCCCT 57.462 47.619 0.00 0.00 0.00 4.20
2272 4310 3.428532 TGTGACTGTTACCTACTCCCTC 58.571 50.000 0.00 0.00 0.00 4.30
2273 4311 2.759535 GTGACTGTTACCTACTCCCTCC 59.240 54.545 0.00 0.00 0.00 4.30
2274 4312 2.022934 GACTGTTACCTACTCCCTCCG 58.977 57.143 0.00 0.00 0.00 4.63
2275 4313 1.357079 ACTGTTACCTACTCCCTCCGT 59.643 52.381 0.00 0.00 0.00 4.69
2276 4314 2.225217 ACTGTTACCTACTCCCTCCGTT 60.225 50.000 0.00 0.00 0.00 4.44
2277 4315 2.426381 CTGTTACCTACTCCCTCCGTTC 59.574 54.545 0.00 0.00 0.00 3.95
2278 4316 1.403323 GTTACCTACTCCCTCCGTTCG 59.597 57.143 0.00 0.00 0.00 3.95
2279 4317 0.107017 TACCTACTCCCTCCGTTCGG 60.107 60.000 4.74 4.74 0.00 4.30
2280 4318 1.077212 CCTACTCCCTCCGTTCGGA 60.077 63.158 13.34 13.34 0.00 4.55
2281 4319 0.682209 CCTACTCCCTCCGTTCGGAA 60.682 60.000 14.79 0.04 33.41 4.30
2282 4320 1.400737 CTACTCCCTCCGTTCGGAAT 58.599 55.000 14.79 2.09 33.41 3.01
2283 4321 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
2284 4322 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
2285 4323 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
2286 4324 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
2287 4325 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
2288 4326 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
2289 4327 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
2290 4328 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
2291 4329 3.368116 CCTCCGTTCGGAATTACTTGTCT 60.368 47.826 14.79 0.00 33.41 3.41
2292 4330 4.243270 CTCCGTTCGGAATTACTTGTCTT 58.757 43.478 14.79 0.00 33.41 3.01
2293 4331 3.991773 TCCGTTCGGAATTACTTGTCTTG 59.008 43.478 11.66 0.00 0.00 3.02
2294 4332 3.124636 CCGTTCGGAATTACTTGTCTTGG 59.875 47.826 5.19 0.00 0.00 3.61
2295 4333 3.991773 CGTTCGGAATTACTTGTCTTGGA 59.008 43.478 0.00 0.00 0.00 3.53
2296 4334 4.630069 CGTTCGGAATTACTTGTCTTGGAT 59.370 41.667 0.00 0.00 0.00 3.41
2297 4335 5.808540 CGTTCGGAATTACTTGTCTTGGATA 59.191 40.000 0.00 0.00 0.00 2.59
2298 4336 6.479001 CGTTCGGAATTACTTGTCTTGGATAT 59.521 38.462 0.00 0.00 0.00 1.63
2299 4337 7.516785 CGTTCGGAATTACTTGTCTTGGATATG 60.517 40.741 0.00 0.00 0.00 1.78
2300 4338 6.288294 TCGGAATTACTTGTCTTGGATATGG 58.712 40.000 0.00 0.00 0.00 2.74
2301 4339 6.099125 TCGGAATTACTTGTCTTGGATATGGA 59.901 38.462 0.00 0.00 0.00 3.41
2302 4340 6.936900 CGGAATTACTTGTCTTGGATATGGAT 59.063 38.462 0.00 0.00 0.00 3.41
2303 4341 7.095060 CGGAATTACTTGTCTTGGATATGGATG 60.095 40.741 0.00 0.00 0.00 3.51
2304 4342 7.721399 GGAATTACTTGTCTTGGATATGGATGT 59.279 37.037 0.00 0.00 0.00 3.06
2305 4343 9.778741 GAATTACTTGTCTTGGATATGGATGTA 57.221 33.333 0.00 0.00 0.00 2.29
2307 4345 9.950496 ATTACTTGTCTTGGATATGGATGTATC 57.050 33.333 0.00 0.00 0.00 2.24
2308 4346 7.623999 ACTTGTCTTGGATATGGATGTATCT 57.376 36.000 0.00 0.00 32.78 1.98
2309 4347 8.727100 ACTTGTCTTGGATATGGATGTATCTA 57.273 34.615 0.00 0.00 32.78 1.98
2310 4348 8.811017 ACTTGTCTTGGATATGGATGTATCTAG 58.189 37.037 0.00 0.00 32.78 2.43
2311 4349 8.956446 TTGTCTTGGATATGGATGTATCTAGA 57.044 34.615 0.00 0.00 32.78 2.43
2312 4350 8.956446 TGTCTTGGATATGGATGTATCTAGAA 57.044 34.615 0.00 0.00 32.78 2.10
2313 4351 8.807118 TGTCTTGGATATGGATGTATCTAGAAC 58.193 37.037 0.00 0.00 32.78 3.01
2314 4352 9.030452 GTCTTGGATATGGATGTATCTAGAACT 57.970 37.037 0.00 0.00 32.78 3.01
2343 4381 9.664332 AATACATCTAGATACATCCATTTCTGC 57.336 33.333 4.54 0.00 0.00 4.26
2344 4382 6.471146 ACATCTAGATACATCCATTTCTGCC 58.529 40.000 4.54 0.00 0.00 4.85
2345 4383 6.043590 ACATCTAGATACATCCATTTCTGCCA 59.956 38.462 4.54 0.00 0.00 4.92
2346 4384 5.858381 TCTAGATACATCCATTTCTGCCAC 58.142 41.667 0.00 0.00 0.00 5.01
2347 4385 4.508551 AGATACATCCATTTCTGCCACA 57.491 40.909 0.00 0.00 0.00 4.17
2348 4386 4.858850 AGATACATCCATTTCTGCCACAA 58.141 39.130 0.00 0.00 0.00 3.33
2349 4387 4.885907 AGATACATCCATTTCTGCCACAAG 59.114 41.667 0.00 0.00 0.00 3.16
2350 4388 2.880443 ACATCCATTTCTGCCACAAGT 58.120 42.857 0.00 0.00 0.00 3.16
2351 4389 4.032960 ACATCCATTTCTGCCACAAGTA 57.967 40.909 0.00 0.00 0.00 2.24
2352 4390 4.406456 ACATCCATTTCTGCCACAAGTAA 58.594 39.130 0.00 0.00 0.00 2.24
2353 4391 5.018809 ACATCCATTTCTGCCACAAGTAAT 58.981 37.500 0.00 0.00 0.00 1.89
2354 4392 5.481473 ACATCCATTTCTGCCACAAGTAATT 59.519 36.000 0.00 0.00 0.00 1.40
2355 4393 5.643379 TCCATTTCTGCCACAAGTAATTC 57.357 39.130 0.00 0.00 0.00 2.17
2356 4394 4.462483 TCCATTTCTGCCACAAGTAATTCC 59.538 41.667 0.00 0.00 0.00 3.01
2357 4395 4.414852 CATTTCTGCCACAAGTAATTCCG 58.585 43.478 0.00 0.00 0.00 4.30
2358 4396 3.410631 TTCTGCCACAAGTAATTCCGA 57.589 42.857 0.00 0.00 0.00 4.55
2359 4397 3.410631 TCTGCCACAAGTAATTCCGAA 57.589 42.857 0.00 0.00 0.00 4.30
2360 4398 3.071479 TCTGCCACAAGTAATTCCGAAC 58.929 45.455 0.00 0.00 0.00 3.95
2361 4399 1.801771 TGCCACAAGTAATTCCGAACG 59.198 47.619 0.00 0.00 0.00 3.95
2362 4400 1.129811 GCCACAAGTAATTCCGAACGG 59.870 52.381 6.94 6.94 0.00 4.44
2363 4401 2.690786 CCACAAGTAATTCCGAACGGA 58.309 47.619 12.04 12.04 43.52 4.69
2364 4402 2.671396 CCACAAGTAATTCCGAACGGAG 59.329 50.000 15.34 5.60 46.06 4.63
2365 4403 2.671396 CACAAGTAATTCCGAACGGAGG 59.329 50.000 15.34 4.52 46.06 4.30
2366 4404 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
2367 4405 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
2368 4406 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
2409 4447 4.815040 TGTTATAGCTCTAGTGAGTCGC 57.185 45.455 0.00 0.00 42.13 5.19
2946 4985 7.469732 GCTTTCTGATAAATCTGATCAAAGGGG 60.470 40.741 0.00 0.00 35.21 4.79
3116 5155 8.697507 AGGTCAACAGATTACAAAGATTTTCT 57.302 30.769 0.00 0.00 0.00 2.52
3206 5268 1.151668 CTGGTTTTCAGTCCTCTGCG 58.848 55.000 0.00 0.00 41.10 5.18
3307 5369 6.963083 AGTACTCCTGATACAGATTACCAC 57.037 41.667 0.00 0.00 32.44 4.16
3332 5394 1.640917 TATTACAGATCCGAGGGCCC 58.359 55.000 16.46 16.46 0.00 5.80
3363 5425 5.412594 TGTTCTCCTCCAATTTTCATCGAAG 59.587 40.000 0.00 0.00 0.00 3.79
3380 5442 1.461127 GAAGATGTGCTCAACCGTGTC 59.539 52.381 0.00 0.00 0.00 3.67
3477 5542 8.339714 CACTCTAGTCTTATACTACTTCACAGC 58.660 40.741 0.00 0.00 39.80 4.40
3495 5560 2.237143 CAGCTGTAACTCCCCATTCTCA 59.763 50.000 5.25 0.00 0.00 3.27
3531 5597 3.526931 TGGTTCCTTGCTCGATTCTAG 57.473 47.619 0.00 0.00 0.00 2.43
3628 5697 1.766494 TCAGGCAATTGCATAGGTGG 58.234 50.000 30.32 12.46 44.36 4.61
3630 5699 2.240921 TCAGGCAATTGCATAGGTGGTA 59.759 45.455 30.32 3.67 44.36 3.25
3633 5702 3.023832 GGCAATTGCATAGGTGGTAACT 58.976 45.455 30.32 0.00 44.36 2.24
3637 5706 5.007724 GCAATTGCATAGGTGGTAACTACTC 59.992 44.000 25.36 0.00 41.59 2.59
3638 5707 5.950544 ATTGCATAGGTGGTAACTACTCA 57.049 39.130 0.00 0.00 37.61 3.41
3641 5710 4.401519 TGCATAGGTGGTAACTACTCACTC 59.598 45.833 0.00 0.00 32.02 3.51
3643 5712 2.444421 AGGTGGTAACTACTCACTCCG 58.556 52.381 0.00 0.00 32.02 4.63
3644 5713 2.165998 GGTGGTAACTACTCACTCCGT 58.834 52.381 0.00 0.00 32.02 4.69
3646 5715 3.366781 GGTGGTAACTACTCACTCCGTTC 60.367 52.174 0.00 0.00 32.02 3.95
3648 5717 3.087781 GGTAACTACTCACTCCGTTCCT 58.912 50.000 0.00 0.00 0.00 3.36
3651 5720 3.996921 ACTACTCACTCCGTTCCTAGA 57.003 47.619 0.00 0.00 0.00 2.43
3652 5721 4.506937 ACTACTCACTCCGTTCCTAGAT 57.493 45.455 0.00 0.00 0.00 1.98
3653 5722 5.627182 ACTACTCACTCCGTTCCTAGATA 57.373 43.478 0.00 0.00 0.00 1.98
3654 5723 6.190346 ACTACTCACTCCGTTCCTAGATAT 57.810 41.667 0.00 0.00 0.00 1.63
3655 5724 6.603224 ACTACTCACTCCGTTCCTAGATATT 58.397 40.000 0.00 0.00 0.00 1.28
3656 5725 7.061688 ACTACTCACTCCGTTCCTAGATATTT 58.938 38.462 0.00 0.00 0.00 1.40
3657 5726 6.150396 ACTCACTCCGTTCCTAGATATTTG 57.850 41.667 0.00 0.00 0.00 2.32
3658 5727 5.657302 ACTCACTCCGTTCCTAGATATTTGT 59.343 40.000 0.00 0.00 0.00 2.83
3661 5730 6.380274 TCACTCCGTTCCTAGATATTTGTCTT 59.620 38.462 0.00 0.00 0.00 3.01
3662 5731 7.042335 CACTCCGTTCCTAGATATTTGTCTTT 58.958 38.462 0.00 0.00 0.00 2.52
3663 5732 7.549488 CACTCCGTTCCTAGATATTTGTCTTTT 59.451 37.037 0.00 0.00 0.00 2.27
3665 5734 9.595823 CTCCGTTCCTAGATATTTGTCTTTTTA 57.404 33.333 0.00 0.00 0.00 1.52
3666 5735 9.595823 TCCGTTCCTAGATATTTGTCTTTTTAG 57.404 33.333 0.00 0.00 0.00 1.85
3667 5736 9.595823 CCGTTCCTAGATATTTGTCTTTTTAGA 57.404 33.333 0.00 0.00 0.00 2.10
3687 5756 9.958180 TTTTAGAGATCTCAAATGATTACCACA 57.042 29.630 24.39 2.49 0.00 4.17
3691 5760 7.869937 AGAGATCTCAAATGATTACCACATACG 59.130 37.037 24.39 0.00 0.00 3.06
3692 5761 6.931281 AGATCTCAAATGATTACCACATACGG 59.069 38.462 0.00 0.00 0.00 4.02
3693 5762 6.228616 TCTCAAATGATTACCACATACGGA 57.771 37.500 0.00 0.00 0.00 4.69
3694 5763 6.826668 TCTCAAATGATTACCACATACGGAT 58.173 36.000 0.00 0.00 0.00 4.18
3695 5764 6.705825 TCTCAAATGATTACCACATACGGATG 59.294 38.462 5.94 5.94 39.16 3.51
3697 5766 7.501844 TCAAATGATTACCACATACGGATGTA 58.498 34.615 14.23 0.00 44.82 2.29
3698 5767 8.154203 TCAAATGATTACCACATACGGATGTAT 58.846 33.333 14.23 7.46 44.82 2.29
3699 5768 9.430623 CAAATGATTACCACATACGGATGTATA 57.569 33.333 14.23 6.38 44.82 1.47
3703 5772 9.689501 TGATTACCACATACGGATGTATATAGA 57.310 33.333 14.23 0.00 44.82 1.98
3704 5773 9.947669 GATTACCACATACGGATGTATATAGAC 57.052 37.037 14.23 0.00 44.82 2.59
3705 5774 8.866970 TTACCACATACGGATGTATATAGACA 57.133 34.615 14.23 2.07 44.82 3.41
3706 5775 7.956328 ACCACATACGGATGTATATAGACAT 57.044 36.000 14.23 12.70 44.82 3.06
3708 5777 9.642343 ACCACATACGGATGTATATAGACATAT 57.358 33.333 14.23 5.08 44.82 1.78
3736 5805 9.944376 TTAGAGTGTAGATTCACTTATTTTGCT 57.056 29.630 0.98 0.00 46.81 3.91
3737 5806 8.485976 AGAGTGTAGATTCACTTATTTTGCTC 57.514 34.615 0.98 0.00 46.81 4.26
3738 5807 7.550906 AGAGTGTAGATTCACTTATTTTGCTCC 59.449 37.037 0.98 0.00 46.81 4.70
3739 5808 6.313905 AGTGTAGATTCACTTATTTTGCTCCG 59.686 38.462 0.00 0.00 44.92 4.63
3740 5809 6.092259 GTGTAGATTCACTTATTTTGCTCCGT 59.908 38.462 0.00 0.00 35.68 4.69
3741 5810 7.277098 GTGTAGATTCACTTATTTTGCTCCGTA 59.723 37.037 0.00 0.00 35.68 4.02
3742 5811 7.985184 TGTAGATTCACTTATTTTGCTCCGTAT 59.015 33.333 0.00 0.00 0.00 3.06
3743 5812 7.251704 AGATTCACTTATTTTGCTCCGTATG 57.748 36.000 0.00 0.00 0.00 2.39
3744 5813 6.823689 AGATTCACTTATTTTGCTCCGTATGT 59.176 34.615 0.00 0.00 0.00 2.29
3745 5814 7.985184 AGATTCACTTATTTTGCTCCGTATGTA 59.015 33.333 0.00 0.00 0.00 2.29
3746 5815 7.534085 TTCACTTATTTTGCTCCGTATGTAG 57.466 36.000 0.00 0.00 0.00 2.74
3747 5816 6.636705 TCACTTATTTTGCTCCGTATGTAGT 58.363 36.000 0.00 0.00 0.00 2.73
3748 5817 6.755141 TCACTTATTTTGCTCCGTATGTAGTC 59.245 38.462 0.00 0.00 0.00 2.59
3749 5818 6.533723 CACTTATTTTGCTCCGTATGTAGTCA 59.466 38.462 0.00 0.00 0.00 3.41
3750 5819 6.757010 ACTTATTTTGCTCCGTATGTAGTCAG 59.243 38.462 0.00 0.00 0.00 3.51
3751 5820 4.530710 TTTTGCTCCGTATGTAGTCAGT 57.469 40.909 0.00 0.00 0.00 3.41
3752 5821 4.530710 TTTGCTCCGTATGTAGTCAGTT 57.469 40.909 0.00 0.00 0.00 3.16
3753 5822 3.503827 TGCTCCGTATGTAGTCAGTTG 57.496 47.619 0.00 0.00 0.00 3.16
3754 5823 2.823747 TGCTCCGTATGTAGTCAGTTGT 59.176 45.455 0.00 0.00 0.00 3.32
3755 5824 3.257375 TGCTCCGTATGTAGTCAGTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
3756 5825 3.612860 GCTCCGTATGTAGTCAGTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
3757 5826 4.617530 GCTCCGTATGTAGTCAGTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
3758 5827 5.456548 TCCGTATGTAGTCAGTTGTTGAA 57.543 39.130 0.00 0.00 37.61 2.69
3759 5828 5.845103 TCCGTATGTAGTCAGTTGTTGAAA 58.155 37.500 0.00 0.00 37.61 2.69
3760 5829 6.460781 TCCGTATGTAGTCAGTTGTTGAAAT 58.539 36.000 0.00 0.00 37.61 2.17
3761 5830 6.588756 TCCGTATGTAGTCAGTTGTTGAAATC 59.411 38.462 0.00 0.00 37.61 2.17
3762 5831 6.590292 CCGTATGTAGTCAGTTGTTGAAATCT 59.410 38.462 0.00 0.00 37.61 2.40
3763 5832 7.117812 CCGTATGTAGTCAGTTGTTGAAATCTT 59.882 37.037 0.00 0.00 37.61 2.40
3764 5833 8.495949 CGTATGTAGTCAGTTGTTGAAATCTTT 58.504 33.333 0.00 0.00 37.61 2.52
3793 5862 8.950007 AAAACAAATATTTAGGAACAGAGGGA 57.050 30.769 0.00 0.00 0.00 4.20
3794 5863 8.581253 AAACAAATATTTAGGAACAGAGGGAG 57.419 34.615 0.00 0.00 0.00 4.30
3795 5864 7.272144 ACAAATATTTAGGAACAGAGGGAGT 57.728 36.000 0.00 0.00 0.00 3.85
3796 5865 8.388656 ACAAATATTTAGGAACAGAGGGAGTA 57.611 34.615 0.00 0.00 0.00 2.59
3797 5866 9.004231 ACAAATATTTAGGAACAGAGGGAGTAT 57.996 33.333 0.00 0.00 0.00 2.12
3798 5867 9.853177 CAAATATTTAGGAACAGAGGGAGTATT 57.147 33.333 0.00 0.00 0.00 1.89
3801 5870 6.803366 TTTAGGAACAGAGGGAGTATTACC 57.197 41.667 0.00 0.00 0.00 2.85
3802 5871 4.628661 AGGAACAGAGGGAGTATTACCT 57.371 45.455 0.00 0.00 40.54 3.08
3803 5872 5.745988 AGGAACAGAGGGAGTATTACCTA 57.254 43.478 0.00 0.00 37.18 3.08
3804 5873 6.296435 AGGAACAGAGGGAGTATTACCTAT 57.704 41.667 0.00 0.00 37.18 2.57
3805 5874 6.316513 AGGAACAGAGGGAGTATTACCTATC 58.683 44.000 0.00 0.00 37.18 2.08
3806 5875 6.104990 AGGAACAGAGGGAGTATTACCTATCT 59.895 42.308 0.00 0.00 37.18 1.98
3807 5876 6.434965 GGAACAGAGGGAGTATTACCTATCTC 59.565 46.154 0.00 0.00 37.18 2.75
3808 5877 6.532119 ACAGAGGGAGTATTACCTATCTCA 57.468 41.667 0.00 0.00 37.18 3.27
3809 5878 7.109901 ACAGAGGGAGTATTACCTATCTCAT 57.890 40.000 0.00 0.00 37.18 2.90
3810 5879 7.179269 ACAGAGGGAGTATTACCTATCTCATC 58.821 42.308 0.00 0.00 37.18 2.92
3811 5880 6.605594 CAGAGGGAGTATTACCTATCTCATCC 59.394 46.154 0.00 0.00 37.18 3.51
3812 5881 5.511363 AGGGAGTATTACCTATCTCATCCG 58.489 45.833 0.00 0.00 34.71 4.18
3813 5882 4.645588 GGGAGTATTACCTATCTCATCCGG 59.354 50.000 0.00 0.00 0.00 5.14
3814 5883 4.645588 GGAGTATTACCTATCTCATCCGGG 59.354 50.000 0.00 0.00 0.00 5.73
3815 5884 4.024670 AGTATTACCTATCTCATCCGGGC 58.975 47.826 0.00 0.00 0.00 6.13
3816 5885 2.391926 TTACCTATCTCATCCGGGCA 57.608 50.000 0.00 0.00 0.00 5.36
3817 5886 2.391926 TACCTATCTCATCCGGGCAA 57.608 50.000 0.00 0.00 0.00 4.52
3818 5887 1.734655 ACCTATCTCATCCGGGCAAT 58.265 50.000 0.00 0.00 0.00 3.56
3819 5888 2.057922 ACCTATCTCATCCGGGCAATT 58.942 47.619 0.00 0.00 0.00 2.32
3820 5889 2.224621 ACCTATCTCATCCGGGCAATTG 60.225 50.000 0.00 0.00 0.00 2.32
3821 5890 2.038952 CCTATCTCATCCGGGCAATTGA 59.961 50.000 10.34 0.00 0.00 2.57
3822 5891 1.972872 ATCTCATCCGGGCAATTGAC 58.027 50.000 10.34 6.06 0.00 3.18
3823 5892 0.461870 TCTCATCCGGGCAATTGACG 60.462 55.000 10.34 12.51 0.00 4.35
3824 5893 0.461870 CTCATCCGGGCAATTGACGA 60.462 55.000 20.13 7.79 0.00 4.20
3825 5894 0.461870 TCATCCGGGCAATTGACGAG 60.462 55.000 20.13 10.68 0.00 4.18
3826 5895 0.461870 CATCCGGGCAATTGACGAGA 60.462 55.000 20.13 13.12 0.00 4.04
3827 5896 0.179073 ATCCGGGCAATTGACGAGAG 60.179 55.000 20.13 6.21 0.00 3.20
3828 5897 1.815421 CCGGGCAATTGACGAGAGG 60.815 63.158 20.13 10.88 0.00 3.69
3829 5898 1.815421 CGGGCAATTGACGAGAGGG 60.815 63.158 10.34 0.00 0.00 4.30
3830 5899 2.115291 GGGCAATTGACGAGAGGGC 61.115 63.158 10.34 0.00 0.00 5.19
3831 5900 1.377202 GGCAATTGACGAGAGGGCA 60.377 57.895 10.34 0.00 0.00 5.36
3832 5901 1.648467 GGCAATTGACGAGAGGGCAC 61.648 60.000 10.34 0.00 0.00 5.01
3846 5915 2.590704 GGCACCCCTTTAACCCATG 58.409 57.895 0.00 0.00 0.00 3.66
3847 5916 0.975556 GGCACCCCTTTAACCCATGG 60.976 60.000 4.14 4.14 0.00 3.66
3848 5917 0.252057 GCACCCCTTTAACCCATGGT 60.252 55.000 11.73 0.00 37.65 3.55
3849 5918 1.847328 CACCCCTTTAACCCATGGTC 58.153 55.000 11.73 0.00 33.12 4.02
3850 5919 1.076350 CACCCCTTTAACCCATGGTCA 59.924 52.381 11.73 0.00 33.12 4.02
3851 5920 2.007636 ACCCCTTTAACCCATGGTCAT 58.992 47.619 11.73 0.00 33.12 3.06
3852 5921 3.053245 CACCCCTTTAACCCATGGTCATA 60.053 47.826 11.73 0.00 33.12 2.15
3853 5922 3.797269 ACCCCTTTAACCCATGGTCATAT 59.203 43.478 11.73 0.00 33.12 1.78
3854 5923 4.151883 CCCCTTTAACCCATGGTCATATG 58.848 47.826 11.73 0.00 33.12 1.78
3855 5924 3.573967 CCCTTTAACCCATGGTCATATGC 59.426 47.826 11.73 0.00 33.12 3.14
3856 5925 4.214310 CCTTTAACCCATGGTCATATGCA 58.786 43.478 11.73 0.00 33.12 3.96
3857 5926 4.037923 CCTTTAACCCATGGTCATATGCAC 59.962 45.833 11.73 0.00 33.12 4.57
3858 5927 2.071778 AACCCATGGTCATATGCACC 57.928 50.000 11.73 14.11 33.12 5.01
3859 5928 0.185901 ACCCATGGTCATATGCACCC 59.814 55.000 11.73 9.39 32.24 4.61
3860 5929 0.185658 CCCATGGTCATATGCACCCA 59.814 55.000 11.73 13.58 32.24 4.51
3861 5930 1.321474 CCATGGTCATATGCACCCAC 58.679 55.000 16.79 3.21 32.24 4.61
3862 5931 1.133699 CCATGGTCATATGCACCCACT 60.134 52.381 16.79 4.61 32.24 4.00
3863 5932 2.658285 CATGGTCATATGCACCCACTT 58.342 47.619 16.79 1.05 32.24 3.16
3864 5933 2.897271 TGGTCATATGCACCCACTTT 57.103 45.000 16.79 0.00 32.24 2.66
3865 5934 3.168035 TGGTCATATGCACCCACTTTT 57.832 42.857 16.79 0.00 32.24 2.27
3866 5935 3.505386 TGGTCATATGCACCCACTTTTT 58.495 40.909 16.79 0.00 32.24 1.94
3933 6002 9.853555 AAATCAAAAGAAAATATCACGCATACA 57.146 25.926 0.00 0.00 0.00 2.29
3935 6004 8.839947 TCAAAAGAAAATATCACGCATACATG 57.160 30.769 0.00 0.00 0.00 3.21
3936 6005 8.458052 TCAAAAGAAAATATCACGCATACATGT 58.542 29.630 2.69 2.69 0.00 3.21
3937 6006 9.075519 CAAAAGAAAATATCACGCATACATGTT 57.924 29.630 2.30 0.00 0.00 2.71
3938 6007 9.638239 AAAAGAAAATATCACGCATACATGTTT 57.362 25.926 2.30 0.00 0.00 2.83
3939 6008 8.619146 AAGAAAATATCACGCATACATGTTTG 57.381 30.769 2.30 7.95 0.00 2.93
3940 6009 6.692681 AGAAAATATCACGCATACATGTTTGC 59.307 34.615 25.81 25.81 34.82 3.68
3941 6010 5.497635 AATATCACGCATACATGTTTGCA 57.502 34.783 31.57 18.40 37.38 4.08
3942 6011 3.846423 ATCACGCATACATGTTTGCAA 57.154 38.095 31.57 20.47 37.38 4.08
3943 6012 3.632855 TCACGCATACATGTTTGCAAA 57.367 38.095 31.57 18.14 37.38 3.68
3944 6013 4.171663 TCACGCATACATGTTTGCAAAT 57.828 36.364 31.57 18.53 37.38 2.32
3945 6014 3.919197 TCACGCATACATGTTTGCAAATG 59.081 39.130 31.57 25.90 37.38 2.32
3946 6015 3.674281 CACGCATACATGTTTGCAAATGT 59.326 39.130 31.57 21.65 40.13 2.71
3947 6016 3.674281 ACGCATACATGTTTGCAAATGTG 59.326 39.130 31.57 22.67 37.57 3.21
3948 6017 3.674281 CGCATACATGTTTGCAAATGTGT 59.326 39.130 31.57 25.57 37.57 3.72
3949 6018 4.433152 CGCATACATGTTTGCAAATGTGTG 60.433 41.667 31.57 25.96 44.27 3.82
3950 6019 4.448395 GCATACATGTTTGCAAATGTGTGT 59.552 37.500 28.30 23.14 43.70 3.72
3951 6020 5.632764 GCATACATGTTTGCAAATGTGTGTA 59.367 36.000 28.30 24.50 43.70 2.90
3952 6021 6.310956 GCATACATGTTTGCAAATGTGTGTAT 59.689 34.615 28.30 25.18 43.70 2.29
3953 6022 7.668190 CATACATGTTTGCAAATGTGTGTATG 58.332 34.615 29.28 29.28 39.61 2.39
3954 6023 4.448395 ACATGTTTGCAAATGTGTGTATGC 59.552 37.500 23.30 6.82 35.71 3.14
3955 6024 3.048501 TGTTTGCAAATGTGTGTATGCG 58.951 40.909 16.21 0.00 41.61 4.73
3956 6025 3.049206 GTTTGCAAATGTGTGTATGCGT 58.951 40.909 16.21 0.00 41.61 5.24
3957 6026 2.610219 TGCAAATGTGTGTATGCGTC 57.390 45.000 0.00 0.00 41.61 5.19
3958 6027 1.876156 TGCAAATGTGTGTATGCGTCA 59.124 42.857 0.00 0.00 41.61 4.35
3959 6028 2.241722 GCAAATGTGTGTATGCGTCAC 58.758 47.619 2.94 2.94 36.48 3.67
3960 6029 2.350293 GCAAATGTGTGTATGCGTCACA 60.350 45.455 12.17 12.17 44.29 3.58
3961 6030 3.851471 GCAAATGTGTGTATGCGTCACAA 60.851 43.478 13.33 5.07 45.36 3.33
3962 6031 4.286101 CAAATGTGTGTATGCGTCACAAA 58.714 39.130 13.33 7.88 45.36 2.83
3963 6032 3.811722 ATGTGTGTATGCGTCACAAAG 57.188 42.857 13.33 0.00 45.36 2.77
3964 6033 2.556257 TGTGTGTATGCGTCACAAAGT 58.444 42.857 11.23 0.00 45.36 2.66
3965 6034 2.939756 TGTGTGTATGCGTCACAAAGTT 59.060 40.909 11.23 0.00 45.36 2.66
3966 6035 3.375610 TGTGTGTATGCGTCACAAAGTTT 59.624 39.130 11.23 0.00 45.36 2.66
3967 6036 4.142578 TGTGTGTATGCGTCACAAAGTTTT 60.143 37.500 11.23 0.00 45.36 2.43
3968 6037 4.204168 GTGTGTATGCGTCACAAAGTTTTG 59.796 41.667 11.23 3.17 45.36 2.44
3988 6057 9.271828 AGTTTTGTGAAAAGAATGTCTTTTTGT 57.728 25.926 15.19 0.00 46.87 2.83
3989 6058 9.877137 GTTTTGTGAAAAGAATGTCTTTTTGTT 57.123 25.926 15.19 0.00 46.87 2.83
3992 6061 9.875675 TTGTGAAAAGAATGTCTTTTTGTTTTG 57.124 25.926 15.19 0.00 46.87 2.44
3993 6062 9.050601 TGTGAAAAGAATGTCTTTTTGTTTTGT 57.949 25.926 15.19 0.00 46.87 2.83
3994 6063 9.528847 GTGAAAAGAATGTCTTTTTGTTTTGTC 57.471 29.630 15.19 3.56 46.87 3.18
3995 6064 9.487790 TGAAAAGAATGTCTTTTTGTTTTGTCT 57.512 25.926 15.19 0.00 46.87 3.41
3996 6065 9.958285 GAAAAGAATGTCTTTTTGTTTTGTCTC 57.042 29.630 15.19 0.00 46.87 3.36
3997 6066 8.479313 AAAGAATGTCTTTTTGTTTTGTCTCC 57.521 30.769 0.00 0.00 43.62 3.71
3998 6067 6.265577 AGAATGTCTTTTTGTTTTGTCTCCG 58.734 36.000 0.00 0.00 0.00 4.63
3999 6068 3.765026 TGTCTTTTTGTTTTGTCTCCGC 58.235 40.909 0.00 0.00 0.00 5.54
4000 6069 3.191581 TGTCTTTTTGTTTTGTCTCCGCA 59.808 39.130 0.00 0.00 0.00 5.69
4001 6070 4.170256 GTCTTTTTGTTTTGTCTCCGCAA 58.830 39.130 0.00 0.00 0.00 4.85
4002 6071 4.623595 GTCTTTTTGTTTTGTCTCCGCAAA 59.376 37.500 0.00 0.00 36.67 3.68
4003 6072 5.119434 GTCTTTTTGTTTTGTCTCCGCAAAA 59.881 36.000 0.00 0.00 43.46 2.44
4004 6073 5.696724 TCTTTTTGTTTTGTCTCCGCAAAAA 59.303 32.000 11.32 11.32 45.96 1.94
4044 6113 9.555727 AGTGCTTCTAAATAGTGTTTTAAGACA 57.444 29.630 9.76 0.00 0.00 3.41
4082 6151 4.935352 TTGCATTGGCTACAAGAAAAGT 57.065 36.364 0.00 0.00 40.49 2.66
4083 6152 4.935352 TGCATTGGCTACAAGAAAAGTT 57.065 36.364 0.00 0.00 40.49 2.66
4084 6153 6.398234 TTGCATTGGCTACAAGAAAAGTTA 57.602 33.333 0.00 0.00 40.49 2.24
4086 6155 6.991938 TGCATTGGCTACAAGAAAAGTTATT 58.008 32.000 0.00 0.00 40.49 1.40
4088 6157 7.930865 TGCATTGGCTACAAGAAAAGTTATTTT 59.069 29.630 0.00 0.00 40.49 1.82
4089 6158 8.773645 GCATTGGCTACAAGAAAAGTTATTTTT 58.226 29.630 0.00 0.00 40.49 1.94
4105 6174 8.515473 AGTTATTTTTCCGTGAAACTTTATGC 57.485 30.769 0.00 0.00 30.83 3.14
4106 6175 8.138712 AGTTATTTTTCCGTGAAACTTTATGCA 58.861 29.630 0.00 0.00 30.83 3.96
4107 6176 6.763303 ATTTTTCCGTGAAACTTTATGCAC 57.237 33.333 0.00 0.00 30.83 4.57
4110 6179 2.308347 CGTGAAACTTTATGCACGCA 57.692 45.000 0.00 0.00 45.81 5.24
4111 6180 1.969256 CGTGAAACTTTATGCACGCAC 59.031 47.619 0.00 0.00 45.81 5.34
4112 6181 2.601029 CGTGAAACTTTATGCACGCACA 60.601 45.455 0.00 0.00 45.81 4.57
4113 6182 3.564511 GTGAAACTTTATGCACGCACAT 58.435 40.909 0.00 0.00 0.00 3.21
4114 6183 4.667922 CGTGAAACTTTATGCACGCACATA 60.668 41.667 0.00 0.00 45.81 2.29
4115 6184 5.150683 GTGAAACTTTATGCACGCACATAA 58.849 37.500 6.61 6.61 40.00 1.90
4116 6185 5.627367 GTGAAACTTTATGCACGCACATAAA 59.373 36.000 17.56 17.56 45.59 1.40
4117 6186 6.143118 GTGAAACTTTATGCACGCACATAAAA 59.857 34.615 18.56 6.50 46.46 1.52
4118 6187 6.143118 TGAAACTTTATGCACGCACATAAAAC 59.857 34.615 18.56 12.83 46.46 2.43
4119 6188 5.114785 ACTTTATGCACGCACATAAAACA 57.885 34.783 18.56 3.92 46.46 2.83
4120 6189 5.708948 ACTTTATGCACGCACATAAAACAT 58.291 33.333 18.56 9.07 46.46 2.71
4121 6190 5.572511 ACTTTATGCACGCACATAAAACATG 59.427 36.000 18.56 12.23 46.46 3.21
4122 6191 2.344504 TGCACGCACATAAAACATGG 57.655 45.000 0.00 0.00 0.00 3.66
4123 6192 1.882623 TGCACGCACATAAAACATGGA 59.117 42.857 0.00 0.00 0.00 3.41
4124 6193 2.095314 TGCACGCACATAAAACATGGAG 60.095 45.455 0.00 0.00 0.00 3.86
4125 6194 2.161410 GCACGCACATAAAACATGGAGA 59.839 45.455 0.00 0.00 0.00 3.71
4126 6195 3.747193 CACGCACATAAAACATGGAGAC 58.253 45.455 0.00 0.00 0.00 3.36
4137 6206 3.706855 TGGAGACATACCAGCGCA 58.293 55.556 11.47 0.00 33.40 6.09
4138 6207 1.979262 TGGAGACATACCAGCGCAA 59.021 52.632 11.47 0.00 33.40 4.85
4139 6208 0.541392 TGGAGACATACCAGCGCAAT 59.459 50.000 11.47 0.00 33.40 3.56
4140 6209 1.065491 TGGAGACATACCAGCGCAATT 60.065 47.619 11.47 0.00 33.40 2.32
4141 6210 2.017049 GGAGACATACCAGCGCAATTT 58.983 47.619 11.47 0.00 0.00 1.82
4142 6211 2.423538 GGAGACATACCAGCGCAATTTT 59.576 45.455 11.47 0.00 0.00 1.82
4143 6212 3.119495 GGAGACATACCAGCGCAATTTTT 60.119 43.478 11.47 0.00 0.00 1.94
4186 6255 4.827692 GAAAAGTGTTTTCCAAAGTGGGT 58.172 39.130 1.37 0.00 42.42 4.51
4187 6256 4.901197 AAAGTGTTTTCCAAAGTGGGTT 57.099 36.364 0.00 0.00 38.32 4.11
4188 6257 4.465632 AAGTGTTTTCCAAAGTGGGTTC 57.534 40.909 0.00 0.00 38.32 3.62
4189 6258 3.436243 AGTGTTTTCCAAAGTGGGTTCA 58.564 40.909 0.00 0.00 38.32 3.18
4190 6259 4.030216 AGTGTTTTCCAAAGTGGGTTCAT 58.970 39.130 0.00 0.00 38.32 2.57
4191 6260 5.205056 AGTGTTTTCCAAAGTGGGTTCATA 58.795 37.500 0.00 0.00 38.32 2.15
4192 6261 5.838521 AGTGTTTTCCAAAGTGGGTTCATAT 59.161 36.000 0.00 0.00 38.32 1.78
4193 6262 5.925969 GTGTTTTCCAAAGTGGGTTCATATG 59.074 40.000 0.00 0.00 38.32 1.78
4194 6263 5.600484 TGTTTTCCAAAGTGGGTTCATATGT 59.400 36.000 1.90 0.00 38.32 2.29
4195 6264 6.778069 TGTTTTCCAAAGTGGGTTCATATGTA 59.222 34.615 1.90 0.00 38.32 2.29
4196 6265 6.827586 TTTCCAAAGTGGGTTCATATGTAC 57.172 37.500 1.90 3.04 38.32 2.90
4197 6266 4.850680 TCCAAAGTGGGTTCATATGTACC 58.149 43.478 20.26 20.26 38.32 3.34
4202 6271 1.134228 GGGTTCATATGTACCCGGGT 58.866 55.000 32.66 32.66 44.05 5.28
4203 6272 1.491754 GGGTTCATATGTACCCGGGTT 59.508 52.381 35.42 17.68 44.05 4.11
4204 6273 2.486013 GGGTTCATATGTACCCGGGTTC 60.486 54.545 35.42 28.38 44.05 3.62
4205 6274 2.171027 GGTTCATATGTACCCGGGTTCA 59.829 50.000 35.42 33.49 30.30 3.18
4206 6275 3.181448 GGTTCATATGTACCCGGGTTCAT 60.181 47.826 37.93 37.93 39.05 2.57
4207 6276 4.062991 GTTCATATGTACCCGGGTTCATC 58.937 47.826 39.48 25.19 37.34 2.92
4208 6277 3.583228 TCATATGTACCCGGGTTCATCT 58.417 45.455 39.48 30.21 37.34 2.90
4209 6278 4.743124 TCATATGTACCCGGGTTCATCTA 58.257 43.478 39.48 27.61 37.34 1.98
4210 6279 5.338632 TCATATGTACCCGGGTTCATCTAT 58.661 41.667 39.48 28.40 37.34 1.98
4211 6280 5.186992 TCATATGTACCCGGGTTCATCTATG 59.813 44.000 39.48 34.79 37.34 2.23
4212 6281 1.414919 TGTACCCGGGTTCATCTATGC 59.585 52.381 35.42 8.19 0.00 3.14
4213 6282 1.414919 GTACCCGGGTTCATCTATGCA 59.585 52.381 35.42 6.33 0.00 3.96
4214 6283 0.180406 ACCCGGGTTCATCTATGCAC 59.820 55.000 24.16 0.00 0.00 4.57
4215 6284 0.469917 CCCGGGTTCATCTATGCACT 59.530 55.000 14.18 0.00 0.00 4.40
4216 6285 1.134098 CCCGGGTTCATCTATGCACTT 60.134 52.381 14.18 0.00 0.00 3.16
4217 6286 2.213499 CCGGGTTCATCTATGCACTTC 58.787 52.381 0.00 0.00 0.00 3.01
4218 6287 2.158900 CCGGGTTCATCTATGCACTTCT 60.159 50.000 0.00 0.00 0.00 2.85
4219 6288 3.126831 CGGGTTCATCTATGCACTTCTC 58.873 50.000 0.00 0.00 0.00 2.87
4220 6289 3.126831 GGGTTCATCTATGCACTTCTCG 58.873 50.000 0.00 0.00 0.00 4.04
4221 6290 3.126831 GGTTCATCTATGCACTTCTCGG 58.873 50.000 0.00 0.00 0.00 4.63
4222 6291 2.515926 TCATCTATGCACTTCTCGGC 57.484 50.000 0.00 0.00 0.00 5.54
4223 6292 1.756538 TCATCTATGCACTTCTCGGCA 59.243 47.619 0.00 0.00 45.23 5.69
4224 6293 2.168313 TCATCTATGCACTTCTCGGCAA 59.832 45.455 0.00 0.00 44.20 4.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
76 77 1.098869 TGTTTCTGTTTCGCTTGGCA 58.901 45.000 0.00 0.00 0.00 4.92
83 84 5.821204 AGACCTTCATTTGTTTCTGTTTCG 58.179 37.500 0.00 0.00 0.00 3.46
93 94 5.564550 AGCTTGATGTAGACCTTCATTTGT 58.435 37.500 0.00 0.00 0.00 2.83
122 123 3.431415 TCCTCCATCTCGAGTTTCTTCA 58.569 45.455 13.13 0.00 0.00 3.02
146 147 6.119144 TCTTGAACTTCTTCTTTTGAACGG 57.881 37.500 0.00 0.00 34.31 4.44
166 167 2.427245 CGACGGCCTCCTCCATCTT 61.427 63.158 0.00 0.00 0.00 2.40
184 185 6.740453 GCTTCAATCTCGAACTTCTTCATTTC 59.260 38.462 0.00 0.00 0.00 2.17
198 199 1.201965 GCTTTGGTCGCTTCAATCTCG 60.202 52.381 0.00 0.00 0.00 4.04
219 220 1.143073 ACCTCTTTTGCTCCGGTCTTT 59.857 47.619 0.00 0.00 0.00 2.52
226 227 2.982744 GCGCCACCTCTTTTGCTCC 61.983 63.158 0.00 0.00 0.00 4.70
235 236 3.426568 GCAAGTGAGCGCCACCTC 61.427 66.667 20.71 6.43 46.87 3.85
270 272 3.181471 CGCTCAGGTCTACCTTCATGATT 60.181 47.826 0.00 0.00 46.09 2.57
292 294 1.190643 CTTCTCCTCAGGGACACCTC 58.809 60.000 0.00 0.00 46.95 3.85
302 304 0.620556 GAACCATGGCCTTCTCCTCA 59.379 55.000 13.04 0.00 0.00 3.86
322 324 9.398170 CTCGAGAAATTCTTTTTGCTTATTCAA 57.602 29.630 6.58 0.00 0.00 2.69
327 329 6.560253 AGCTCGAGAAATTCTTTTTGCTTA 57.440 33.333 18.75 0.00 0.00 3.09
351 353 1.073964 CGGCCATAGCTCAATCATCG 58.926 55.000 2.24 0.00 39.73 3.84
352 354 2.028658 TCTCGGCCATAGCTCAATCATC 60.029 50.000 2.24 0.00 39.73 2.92
353 355 1.973515 TCTCGGCCATAGCTCAATCAT 59.026 47.619 2.24 0.00 39.73 2.45
380 382 3.255725 CACAAGCCAGCATACAAAATGG 58.744 45.455 0.00 0.00 35.84 3.16
390 392 1.745115 GCCGATACACAAGCCAGCA 60.745 57.895 0.00 0.00 0.00 4.41
391 393 2.472909 GGCCGATACACAAGCCAGC 61.473 63.158 0.00 0.00 45.07 4.85
392 394 3.813596 GGCCGATACACAAGCCAG 58.186 61.111 0.00 0.00 45.07 4.85
394 396 0.392461 TTCAGGCCGATACACAAGCC 60.392 55.000 0.00 0.00 46.13 4.35
406 408 0.181350 CATGGTCCCTAGTTCAGGCC 59.819 60.000 0.00 0.00 43.98 5.19
440 443 2.027625 GGTACACTTGCGAGCGCTT 61.028 57.895 13.26 0.00 42.51 4.68
456 459 2.111043 CACTTGCCAGTGGTCGGT 59.889 61.111 11.74 4.19 46.10 4.69
478 481 4.584327 AAAAATGCCTCAAGTTTACGCT 57.416 36.364 0.00 0.00 0.00 5.07
509 512 0.806102 GCAGCGACCGACATACATGT 60.806 55.000 2.69 2.69 45.16 3.21
528 531 0.176680 AGTCATGTTAGCCAGAGCGG 59.823 55.000 0.00 0.00 46.67 5.52
530 533 3.810310 ACTAGTCATGTTAGCCAGAGC 57.190 47.619 0.00 0.00 40.32 4.09
561 564 0.451783 CCGCCAGAACCATTTGCTAC 59.548 55.000 0.00 0.00 0.00 3.58
573 576 3.583276 ATTTCGTGCGTCCGCCAGA 62.583 57.895 9.43 5.70 41.09 3.86
603 1444 9.833917 TCCGTATATATCTACCTCACATCTAAG 57.166 37.037 0.00 0.00 0.00 2.18
651 1510 4.974399 AGGTCTCACTTTGTAAGGGAAAG 58.026 43.478 0.00 0.00 41.18 2.62
652 1511 5.382664 AAGGTCTCACTTTGTAAGGGAAA 57.617 39.130 0.00 0.00 41.18 3.13
653 1512 5.382664 AAAGGTCTCACTTTGTAAGGGAA 57.617 39.130 0.00 0.00 41.18 3.97
662 1521 3.290710 ACATGTGCAAAGGTCTCACTTT 58.709 40.909 0.00 0.00 41.12 2.66
695 2702 3.575630 TCAAAGACCTCGAAATCACTCG 58.424 45.455 0.00 0.00 40.25 4.18
700 2707 4.142795 GCTTTCCTCAAAGACCTCGAAATC 60.143 45.833 0.00 0.00 41.60 2.17
726 2733 2.368655 TTACGGTCGCTACCCTTTTC 57.631 50.000 1.10 0.00 43.54 2.29
743 2750 0.322098 CACGCACTTCCACCCCATTA 60.322 55.000 0.00 0.00 0.00 1.90
795 2802 2.895424 CGGCAGGAACCCAGGAACT 61.895 63.158 0.00 0.00 43.88 3.01
856 2863 2.282446 GAGGGTCGGATCTGGGGA 59.718 66.667 0.62 0.00 0.00 4.81
920 2941 1.152756 GTGGTATGTGGGGATGGGC 60.153 63.158 0.00 0.00 0.00 5.36
1005 3032 4.227134 ATGGAGGCGCTAGCGGTG 62.227 66.667 35.86 11.52 46.35 4.94
1092 3119 0.033405 CGAGGAGGAGGTACCAGGAA 60.033 60.000 15.94 0.00 42.04 3.36
1590 3620 3.231736 AGCACGACGTGGTCCCTT 61.232 61.111 25.82 0.00 40.38 3.95
1737 3767 2.065993 AGAAGTTGTCGACGACATGG 57.934 50.000 32.20 0.00 42.40 3.66
1794 3824 1.192146 TGGCGCCTTGGAAGTAGAGT 61.192 55.000 29.70 0.00 0.00 3.24
1855 3885 7.668052 TCTTAATTCCCTGCTTAAGCTAAAACA 59.332 33.333 26.90 5.90 42.66 2.83
1880 3910 4.495422 AGTTGACTAATCACACCACGATC 58.505 43.478 0.00 0.00 33.38 3.69
1971 4009 4.100707 CCAGTACATGGCAAACATTCTG 57.899 45.455 0.00 0.00 43.83 3.02
2000 4038 8.829514 TTAAATCGGTTAAATAGCAAATCGTG 57.170 30.769 0.00 0.00 0.00 4.35
2001 4039 8.671028 ACTTAAATCGGTTAAATAGCAAATCGT 58.329 29.630 0.00 0.00 31.22 3.73
2002 4040 9.498307 AACTTAAATCGGTTAAATAGCAAATCG 57.502 29.630 0.00 0.00 31.22 3.34
2030 4068 5.191426 AGTTTAGGATCGTGCTACTGACTA 58.809 41.667 0.00 0.00 0.00 2.59
2051 4089 1.840737 ACAGATGAGGTCGTGCTAGT 58.159 50.000 0.00 0.00 0.00 2.57
2059 4097 3.626930 ACTCCAGACTACAGATGAGGTC 58.373 50.000 0.00 0.00 0.00 3.85
2264 4302 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
2265 4303 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
2266 4304 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
2267 4305 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
2268 4306 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
2269 4307 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
2270 4308 3.846360 AGACAAGTAATTCCGAACGGAG 58.154 45.455 15.34 5.60 46.06 4.63
2271 4309 3.947910 AGACAAGTAATTCCGAACGGA 57.052 42.857 12.04 12.04 43.52 4.69
2272 4310 3.124636 CCAAGACAAGTAATTCCGAACGG 59.875 47.826 6.94 6.94 0.00 4.44
2273 4311 3.991773 TCCAAGACAAGTAATTCCGAACG 59.008 43.478 0.00 0.00 0.00 3.95
2274 4312 7.254795 CCATATCCAAGACAAGTAATTCCGAAC 60.255 40.741 0.00 0.00 0.00 3.95
2275 4313 6.765989 CCATATCCAAGACAAGTAATTCCGAA 59.234 38.462 0.00 0.00 0.00 4.30
2276 4314 6.099125 TCCATATCCAAGACAAGTAATTCCGA 59.901 38.462 0.00 0.00 0.00 4.55
2277 4315 6.288294 TCCATATCCAAGACAAGTAATTCCG 58.712 40.000 0.00 0.00 0.00 4.30
2278 4316 7.721399 ACATCCATATCCAAGACAAGTAATTCC 59.279 37.037 0.00 0.00 0.00 3.01
2279 4317 8.682936 ACATCCATATCCAAGACAAGTAATTC 57.317 34.615 0.00 0.00 0.00 2.17
2281 4319 9.950496 GATACATCCATATCCAAGACAAGTAAT 57.050 33.333 0.00 0.00 0.00 1.89
2282 4320 9.159254 AGATACATCCATATCCAAGACAAGTAA 57.841 33.333 0.00 0.00 32.76 2.24
2283 4321 8.727100 AGATACATCCATATCCAAGACAAGTA 57.273 34.615 0.00 0.00 32.76 2.24
2284 4322 7.623999 AGATACATCCATATCCAAGACAAGT 57.376 36.000 0.00 0.00 32.76 3.16
2285 4323 9.029368 TCTAGATACATCCATATCCAAGACAAG 57.971 37.037 0.00 0.00 32.76 3.16
2286 4324 8.956446 TCTAGATACATCCATATCCAAGACAA 57.044 34.615 0.00 0.00 32.76 3.18
2287 4325 8.807118 GTTCTAGATACATCCATATCCAAGACA 58.193 37.037 0.00 0.00 32.76 3.41
2288 4326 9.030452 AGTTCTAGATACATCCATATCCAAGAC 57.970 37.037 0.00 0.00 32.76 3.01
2317 4355 9.664332 GCAGAAATGGATGTATCTAGATGTATT 57.336 33.333 15.79 4.32 0.00 1.89
2318 4356 8.263640 GGCAGAAATGGATGTATCTAGATGTAT 58.736 37.037 15.79 9.11 0.00 2.29
2319 4357 7.235399 TGGCAGAAATGGATGTATCTAGATGTA 59.765 37.037 15.79 4.44 0.00 2.29
2320 4358 6.043590 TGGCAGAAATGGATGTATCTAGATGT 59.956 38.462 15.79 1.25 0.00 3.06
2321 4359 6.370994 GTGGCAGAAATGGATGTATCTAGATG 59.629 42.308 15.79 0.00 0.00 2.90
2322 4360 6.043590 TGTGGCAGAAATGGATGTATCTAGAT 59.956 38.462 10.73 10.73 0.00 1.98
2323 4361 5.366477 TGTGGCAGAAATGGATGTATCTAGA 59.634 40.000 0.00 0.00 0.00 2.43
2324 4362 5.614308 TGTGGCAGAAATGGATGTATCTAG 58.386 41.667 0.00 0.00 0.00 2.43
2325 4363 5.628797 TGTGGCAGAAATGGATGTATCTA 57.371 39.130 0.00 0.00 0.00 1.98
2326 4364 4.508551 TGTGGCAGAAATGGATGTATCT 57.491 40.909 0.00 0.00 0.00 1.98
2327 4365 4.641989 ACTTGTGGCAGAAATGGATGTATC 59.358 41.667 0.00 0.00 0.00 2.24
2328 4366 4.603131 ACTTGTGGCAGAAATGGATGTAT 58.397 39.130 0.00 0.00 0.00 2.29
2329 4367 4.032960 ACTTGTGGCAGAAATGGATGTA 57.967 40.909 0.00 0.00 0.00 2.29
2330 4368 2.880443 ACTTGTGGCAGAAATGGATGT 58.120 42.857 0.00 0.00 0.00 3.06
2331 4369 5.587388 ATTACTTGTGGCAGAAATGGATG 57.413 39.130 0.00 0.00 0.00 3.51
2332 4370 5.127682 GGAATTACTTGTGGCAGAAATGGAT 59.872 40.000 0.00 0.00 0.00 3.41
2333 4371 4.462483 GGAATTACTTGTGGCAGAAATGGA 59.538 41.667 0.00 0.00 0.00 3.41
2334 4372 4.675146 CGGAATTACTTGTGGCAGAAATGG 60.675 45.833 0.00 0.00 0.00 3.16
2335 4373 4.155826 TCGGAATTACTTGTGGCAGAAATG 59.844 41.667 0.00 0.00 0.00 2.32
2336 4374 4.331968 TCGGAATTACTTGTGGCAGAAAT 58.668 39.130 0.00 0.00 0.00 2.17
2337 4375 3.745799 TCGGAATTACTTGTGGCAGAAA 58.254 40.909 0.00 0.00 0.00 2.52
2338 4376 3.410631 TCGGAATTACTTGTGGCAGAA 57.589 42.857 0.00 0.00 0.00 3.02
2339 4377 3.071479 GTTCGGAATTACTTGTGGCAGA 58.929 45.455 0.00 0.00 0.00 4.26
2340 4378 2.159707 CGTTCGGAATTACTTGTGGCAG 60.160 50.000 0.00 0.00 0.00 4.85
2341 4379 1.801771 CGTTCGGAATTACTTGTGGCA 59.198 47.619 0.00 0.00 0.00 4.92
2342 4380 1.129811 CCGTTCGGAATTACTTGTGGC 59.870 52.381 5.19 0.00 0.00 5.01
2343 4381 2.671396 CTCCGTTCGGAATTACTTGTGG 59.329 50.000 14.79 0.00 33.41 4.17
2344 4382 2.671396 CCTCCGTTCGGAATTACTTGTG 59.329 50.000 14.79 0.64 33.41 3.33
2345 4383 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
2346 4384 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
2347 4385 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
2348 4386 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
2349 4387 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
2350 4388 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
2351 4389 1.479730 GTACTCCCTCCGTTCGGAATT 59.520 52.381 14.79 0.00 33.41 2.17
2352 4390 1.109609 GTACTCCCTCCGTTCGGAAT 58.890 55.000 14.79 2.09 33.41 3.01
2353 4391 0.038744 AGTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
2354 4392 0.038744 AAGTACTCCCTCCGTTCGGA 59.961 55.000 13.34 13.34 0.00 4.55
2355 4393 1.755179 TAAGTACTCCCTCCGTTCGG 58.245 55.000 4.74 4.74 0.00 4.30
2356 4394 4.556302 GCTTATAAGTACTCCCTCCGTTCG 60.556 50.000 13.91 0.00 0.00 3.95
2357 4395 4.261952 GGCTTATAAGTACTCCCTCCGTTC 60.262 50.000 13.91 0.00 0.00 3.95
2358 4396 3.640498 GGCTTATAAGTACTCCCTCCGTT 59.360 47.826 13.91 0.00 0.00 4.44
2359 4397 3.229293 GGCTTATAAGTACTCCCTCCGT 58.771 50.000 13.91 0.00 0.00 4.69
2360 4398 2.561858 GGGCTTATAAGTACTCCCTCCG 59.438 54.545 13.91 0.00 0.00 4.63
2361 4399 2.905085 GGGGCTTATAAGTACTCCCTCC 59.095 54.545 19.52 7.12 34.28 4.30
2362 4400 2.561858 CGGGGCTTATAAGTACTCCCTC 59.438 54.545 19.52 9.79 34.28 4.30
2363 4401 2.090887 ACGGGGCTTATAAGTACTCCCT 60.091 50.000 19.52 10.87 34.28 4.20
2364 4402 2.323599 ACGGGGCTTATAAGTACTCCC 58.676 52.381 13.91 14.23 0.00 4.30
2365 4403 4.412796 AAACGGGGCTTATAAGTACTCC 57.587 45.455 13.91 6.64 0.00 3.85
2366 4404 6.519382 ACATAAACGGGGCTTATAAGTACTC 58.481 40.000 13.91 6.72 0.00 2.59
2367 4405 6.490241 ACATAAACGGGGCTTATAAGTACT 57.510 37.500 13.91 0.00 0.00 2.73
2368 4406 8.837788 ATAACATAAACGGGGCTTATAAGTAC 57.162 34.615 13.91 7.43 0.00 2.73
2444 4482 7.031372 CGACAATCACAATTTTGGATTCTCAT 58.969 34.615 0.00 0.00 30.76 2.90
2946 4985 1.623811 TGTCCACTCTTCTGGGCTTAC 59.376 52.381 0.00 0.00 36.80 2.34
3116 5155 3.799366 TGTTTTGTTAGCTTCAGACCGA 58.201 40.909 0.00 0.00 0.00 4.69
3206 5268 1.686052 CACTATGGGCACTCTCCTCTC 59.314 57.143 0.00 0.00 0.00 3.20
3257 5319 5.069781 ACTCCATTAATCTCCTGTAGCTGTC 59.930 44.000 0.00 0.00 0.00 3.51
3300 5362 6.934645 CGGATCTGTAATATTGTGGTGGTAAT 59.065 38.462 0.00 0.00 0.00 1.89
3307 5369 4.569943 CCCTCGGATCTGTAATATTGTGG 58.430 47.826 0.42 0.00 0.00 4.17
3332 5394 6.922957 TGAAAATTGGAGGAGAACAAAAATCG 59.077 34.615 0.00 0.00 0.00 3.34
3363 5425 0.666274 TCGACACGGTTGAGCACATC 60.666 55.000 0.00 0.00 0.00 3.06
3380 5442 9.931210 GATACAAAAAGTTATTGTCCCTAATCG 57.069 33.333 0.00 0.00 41.11 3.34
3477 5542 3.431486 GCTCTGAGAATGGGGAGTTACAG 60.431 52.174 9.28 0.00 0.00 2.74
3495 5560 5.635120 AGGAACCATAAAAACTCTTGCTCT 58.365 37.500 0.00 0.00 0.00 4.09
3531 5597 3.436015 GTCATCTGCAGATATCACATGGC 59.564 47.826 28.27 14.12 32.63 4.40
3628 5697 5.181748 TCTAGGAACGGAGTGAGTAGTTAC 58.818 45.833 0.00 0.00 45.00 2.50
3630 5699 4.298103 TCTAGGAACGGAGTGAGTAGTT 57.702 45.455 0.00 0.00 45.00 2.24
3633 5702 6.832384 ACAAATATCTAGGAACGGAGTGAGTA 59.168 38.462 0.00 0.00 45.00 2.59
3637 5706 6.150396 AGACAAATATCTAGGAACGGAGTG 57.850 41.667 0.00 0.00 45.00 3.51
3641 5710 9.595823 TCTAAAAAGACAAATATCTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
3661 5730 9.958180 TGTGGTAATCATTTGAGATCTCTAAAA 57.042 29.630 22.95 15.91 31.28 1.52
3665 5734 7.869937 CGTATGTGGTAATCATTTGAGATCTCT 59.130 37.037 22.95 4.05 0.00 3.10
3666 5735 7.116948 CCGTATGTGGTAATCATTTGAGATCTC 59.883 40.741 16.21 16.21 0.00 2.75
3667 5736 6.931281 CCGTATGTGGTAATCATTTGAGATCT 59.069 38.462 0.00 0.00 0.00 2.75
3668 5737 6.929049 TCCGTATGTGGTAATCATTTGAGATC 59.071 38.462 0.00 0.00 0.00 2.75
3669 5738 6.826668 TCCGTATGTGGTAATCATTTGAGAT 58.173 36.000 0.00 0.00 0.00 2.75
3670 5739 6.228616 TCCGTATGTGGTAATCATTTGAGA 57.771 37.500 0.00 0.00 0.00 3.27
3671 5740 6.483307 ACATCCGTATGTGGTAATCATTTGAG 59.517 38.462 0.00 0.00 44.79 3.02
3672 5741 6.353323 ACATCCGTATGTGGTAATCATTTGA 58.647 36.000 0.00 0.00 44.79 2.69
3673 5742 6.618287 ACATCCGTATGTGGTAATCATTTG 57.382 37.500 0.00 0.00 44.79 2.32
3677 5746 9.689501 TCTATATACATCCGTATGTGGTAATCA 57.310 33.333 3.56 0.00 45.99 2.57
3678 5747 9.947669 GTCTATATACATCCGTATGTGGTAATC 57.052 37.037 3.56 0.00 45.99 1.75
3679 5748 9.470399 TGTCTATATACATCCGTATGTGGTAAT 57.530 33.333 3.56 0.00 45.99 1.89
3680 5749 8.866970 TGTCTATATACATCCGTATGTGGTAA 57.133 34.615 3.56 0.00 45.99 2.85
3682 5751 7.956328 ATGTCTATATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
3715 5784 6.092259 ACGGAGCAAAATAAGTGAATCTACAC 59.908 38.462 0.00 0.00 40.60 2.90
3716 5785 6.170506 ACGGAGCAAAATAAGTGAATCTACA 58.829 36.000 0.00 0.00 0.00 2.74
3717 5786 6.663944 ACGGAGCAAAATAAGTGAATCTAC 57.336 37.500 0.00 0.00 0.00 2.59
3718 5787 7.985184 ACATACGGAGCAAAATAAGTGAATCTA 59.015 33.333 0.00 0.00 0.00 1.98
3719 5788 6.823689 ACATACGGAGCAAAATAAGTGAATCT 59.176 34.615 0.00 0.00 0.00 2.40
3720 5789 7.016361 ACATACGGAGCAAAATAAGTGAATC 57.984 36.000 0.00 0.00 0.00 2.52
3721 5790 7.769044 ACTACATACGGAGCAAAATAAGTGAAT 59.231 33.333 0.00 0.00 0.00 2.57
3722 5791 7.101054 ACTACATACGGAGCAAAATAAGTGAA 58.899 34.615 0.00 0.00 0.00 3.18
3723 5792 6.636705 ACTACATACGGAGCAAAATAAGTGA 58.363 36.000 0.00 0.00 0.00 3.41
3724 5793 6.533723 TGACTACATACGGAGCAAAATAAGTG 59.466 38.462 0.00 0.00 0.00 3.16
3725 5794 6.636705 TGACTACATACGGAGCAAAATAAGT 58.363 36.000 0.00 0.00 0.00 2.24
3726 5795 6.757010 ACTGACTACATACGGAGCAAAATAAG 59.243 38.462 0.00 0.00 0.00 1.73
3727 5796 6.636705 ACTGACTACATACGGAGCAAAATAA 58.363 36.000 0.00 0.00 0.00 1.40
3728 5797 6.216801 ACTGACTACATACGGAGCAAAATA 57.783 37.500 0.00 0.00 0.00 1.40
3729 5798 5.086104 ACTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
3730 5799 4.530710 ACTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
3731 5800 4.242475 CAACTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
3732 5801 3.257375 ACAACTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
3733 5802 2.823747 ACAACTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
3734 5803 3.505464 ACAACTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
3735 5804 5.055642 TCAACAACTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
3736 5805 5.456548 TTCAACAACTGACTACATACGGA 57.543 39.130 0.00 0.00 32.21 4.69
3737 5806 6.590292 AGATTTCAACAACTGACTACATACGG 59.410 38.462 0.00 0.00 32.21 4.02
3738 5807 7.582435 AGATTTCAACAACTGACTACATACG 57.418 36.000 0.00 0.00 32.21 3.06
3767 5836 9.374711 TCCCTCTGTTCCTAAATATTTGTTTTT 57.625 29.630 11.05 0.00 0.00 1.94
3768 5837 8.950007 TCCCTCTGTTCCTAAATATTTGTTTT 57.050 30.769 11.05 0.00 0.00 2.43
3769 5838 8.170730 ACTCCCTCTGTTCCTAAATATTTGTTT 58.829 33.333 11.05 0.00 0.00 2.83
3770 5839 7.699878 ACTCCCTCTGTTCCTAAATATTTGTT 58.300 34.615 11.05 0.00 0.00 2.83
3771 5840 7.272144 ACTCCCTCTGTTCCTAAATATTTGT 57.728 36.000 11.05 0.00 0.00 2.83
3772 5841 9.853177 AATACTCCCTCTGTTCCTAAATATTTG 57.147 33.333 11.05 1.40 0.00 2.32
3775 5844 9.102453 GGTAATACTCCCTCTGTTCCTAAATAT 57.898 37.037 0.00 0.00 0.00 1.28
3776 5845 8.294690 AGGTAATACTCCCTCTGTTCCTAAATA 58.705 37.037 0.00 0.00 0.00 1.40
3777 5846 7.140304 AGGTAATACTCCCTCTGTTCCTAAAT 58.860 38.462 0.00 0.00 0.00 1.40
3778 5847 6.509386 AGGTAATACTCCCTCTGTTCCTAAA 58.491 40.000 0.00 0.00 0.00 1.85
3779 5848 6.101274 AGGTAATACTCCCTCTGTTCCTAA 57.899 41.667 0.00 0.00 0.00 2.69
3780 5849 5.745988 AGGTAATACTCCCTCTGTTCCTA 57.254 43.478 0.00 0.00 0.00 2.94
3781 5850 4.628661 AGGTAATACTCCCTCTGTTCCT 57.371 45.455 0.00 0.00 0.00 3.36
3782 5851 6.316513 AGATAGGTAATACTCCCTCTGTTCC 58.683 44.000 0.00 0.00 32.08 3.62
3783 5852 7.005296 TGAGATAGGTAATACTCCCTCTGTTC 58.995 42.308 0.00 0.00 32.08 3.18
3784 5853 6.923670 TGAGATAGGTAATACTCCCTCTGTT 58.076 40.000 0.00 0.00 32.08 3.16
3785 5854 6.532119 TGAGATAGGTAATACTCCCTCTGT 57.468 41.667 0.00 0.00 32.08 3.41
3786 5855 6.605594 GGATGAGATAGGTAATACTCCCTCTG 59.394 46.154 0.00 0.00 32.08 3.35
3787 5856 6.579445 CGGATGAGATAGGTAATACTCCCTCT 60.579 46.154 0.00 0.00 32.08 3.69
3788 5857 5.591067 CGGATGAGATAGGTAATACTCCCTC 59.409 48.000 0.00 0.00 32.08 4.30
3789 5858 5.511363 CGGATGAGATAGGTAATACTCCCT 58.489 45.833 0.00 0.00 34.74 4.20
3790 5859 4.645588 CCGGATGAGATAGGTAATACTCCC 59.354 50.000 0.00 0.00 0.00 4.30
3791 5860 4.645588 CCCGGATGAGATAGGTAATACTCC 59.354 50.000 0.73 0.00 0.00 3.85
3792 5861 4.098196 GCCCGGATGAGATAGGTAATACTC 59.902 50.000 0.73 0.00 0.00 2.59
3793 5862 4.024670 GCCCGGATGAGATAGGTAATACT 58.975 47.826 0.73 0.00 0.00 2.12
3794 5863 3.767673 TGCCCGGATGAGATAGGTAATAC 59.232 47.826 0.73 0.00 0.00 1.89
3795 5864 4.055710 TGCCCGGATGAGATAGGTAATA 57.944 45.455 0.73 0.00 0.00 0.98
3796 5865 2.902608 TGCCCGGATGAGATAGGTAAT 58.097 47.619 0.73 0.00 0.00 1.89
3797 5866 2.391926 TGCCCGGATGAGATAGGTAA 57.608 50.000 0.73 0.00 0.00 2.85
3798 5867 2.391926 TTGCCCGGATGAGATAGGTA 57.608 50.000 0.73 0.00 0.00 3.08
3799 5868 1.734655 ATTGCCCGGATGAGATAGGT 58.265 50.000 0.73 0.00 0.00 3.08
3800 5869 2.038952 TCAATTGCCCGGATGAGATAGG 59.961 50.000 0.73 0.00 0.00 2.57
3801 5870 3.070018 GTCAATTGCCCGGATGAGATAG 58.930 50.000 0.73 0.00 0.00 2.08
3802 5871 2.547855 CGTCAATTGCCCGGATGAGATA 60.548 50.000 0.73 0.00 0.00 1.98
3803 5872 1.811558 CGTCAATTGCCCGGATGAGAT 60.812 52.381 0.73 0.00 0.00 2.75
3804 5873 0.461870 CGTCAATTGCCCGGATGAGA 60.462 55.000 0.73 0.00 0.00 3.27
3805 5874 0.461870 TCGTCAATTGCCCGGATGAG 60.462 55.000 0.73 0.00 0.00 2.90
3806 5875 0.461870 CTCGTCAATTGCCCGGATGA 60.462 55.000 0.73 0.00 0.00 2.92
3807 5876 0.461870 TCTCGTCAATTGCCCGGATG 60.462 55.000 0.73 0.00 0.00 3.51
3808 5877 0.179073 CTCTCGTCAATTGCCCGGAT 60.179 55.000 0.73 0.00 0.00 4.18
3809 5878 1.218047 CTCTCGTCAATTGCCCGGA 59.782 57.895 0.73 10.73 0.00 5.14
3810 5879 1.815421 CCTCTCGTCAATTGCCCGG 60.815 63.158 14.60 0.00 0.00 5.73
3811 5880 1.815421 CCCTCTCGTCAATTGCCCG 60.815 63.158 0.00 5.81 0.00 6.13
3812 5881 2.115291 GCCCTCTCGTCAATTGCCC 61.115 63.158 0.00 0.00 0.00 5.36
3813 5882 1.377202 TGCCCTCTCGTCAATTGCC 60.377 57.895 0.00 0.00 0.00 4.52
3814 5883 1.648467 GGTGCCCTCTCGTCAATTGC 61.648 60.000 0.00 0.00 0.00 3.56
3815 5884 1.026718 GGGTGCCCTCTCGTCAATTG 61.027 60.000 0.00 0.00 0.00 2.32
3816 5885 1.299976 GGGTGCCCTCTCGTCAATT 59.700 57.895 0.00 0.00 0.00 2.32
3817 5886 2.670148 GGGGTGCCCTCTCGTCAAT 61.670 63.158 7.26 0.00 41.34 2.57
3818 5887 3.319198 GGGGTGCCCTCTCGTCAA 61.319 66.667 7.26 0.00 41.34 3.18
3827 5896 0.975556 CATGGGTTAAAGGGGTGCCC 60.976 60.000 0.00 0.00 45.90 5.36
3828 5897 0.975556 CCATGGGTTAAAGGGGTGCC 60.976 60.000 2.85 0.00 0.00 5.01
3829 5898 0.252057 ACCATGGGTTAAAGGGGTGC 60.252 55.000 18.09 0.00 27.29 5.01
3830 5899 1.076350 TGACCATGGGTTAAAGGGGTG 59.924 52.381 18.09 0.00 35.25 4.61
3831 5900 1.462426 TGACCATGGGTTAAAGGGGT 58.538 50.000 18.09 0.00 35.25 4.95
3832 5901 2.846665 ATGACCATGGGTTAAAGGGG 57.153 50.000 18.09 0.00 35.25 4.79
3833 5902 3.573967 GCATATGACCATGGGTTAAAGGG 59.426 47.826 18.09 0.00 35.25 3.95
3834 5903 4.037923 GTGCATATGACCATGGGTTAAAGG 59.962 45.833 18.09 0.11 35.25 3.11
3835 5904 4.037923 GGTGCATATGACCATGGGTTAAAG 59.962 45.833 18.09 2.84 35.25 1.85
3836 5905 3.957497 GGTGCATATGACCATGGGTTAAA 59.043 43.478 18.09 0.00 35.25 1.52
3837 5906 3.561143 GGTGCATATGACCATGGGTTAA 58.439 45.455 18.09 0.00 35.25 2.01
3838 5907 2.158534 GGGTGCATATGACCATGGGTTA 60.159 50.000 18.09 4.84 35.25 2.85
3839 5908 1.411501 GGGTGCATATGACCATGGGTT 60.412 52.381 18.09 2.43 35.25 4.11
3840 5909 0.185901 GGGTGCATATGACCATGGGT 59.814 55.000 18.09 4.15 39.44 4.51
3841 5910 0.185658 TGGGTGCATATGACCATGGG 59.814 55.000 18.09 0.00 34.89 4.00
3842 5911 1.133699 AGTGGGTGCATATGACCATGG 60.134 52.381 11.19 11.19 34.89 3.66
3843 5912 2.353357 AGTGGGTGCATATGACCATG 57.647 50.000 19.53 0.00 34.89 3.66
3844 5913 3.386932 AAAGTGGGTGCATATGACCAT 57.613 42.857 19.53 7.77 34.89 3.55
3845 5914 2.897271 AAAGTGGGTGCATATGACCA 57.103 45.000 19.53 14.96 34.89 4.02
3907 5976 9.853555 TGTATGCGTGATATTTTCTTTTGATTT 57.146 25.926 0.00 0.00 0.00 2.17
3909 5978 9.454585 CATGTATGCGTGATATTTTCTTTTGAT 57.545 29.630 0.00 0.00 33.58 2.57
3910 5979 8.458052 ACATGTATGCGTGATATTTTCTTTTGA 58.542 29.630 10.22 0.00 35.65 2.69
3911 5980 8.619146 ACATGTATGCGTGATATTTTCTTTTG 57.381 30.769 10.22 0.00 35.65 2.44
3912 5981 9.638239 AAACATGTATGCGTGATATTTTCTTTT 57.362 25.926 10.22 0.00 35.65 2.27
3913 5982 9.075519 CAAACATGTATGCGTGATATTTTCTTT 57.924 29.630 10.22 0.00 35.65 2.52
3914 5983 7.220683 GCAAACATGTATGCGTGATATTTTCTT 59.779 33.333 10.22 0.00 35.65 2.52
3915 5984 6.692681 GCAAACATGTATGCGTGATATTTTCT 59.307 34.615 10.22 0.00 35.65 2.52
3916 5985 6.471841 TGCAAACATGTATGCGTGATATTTTC 59.528 34.615 10.22 0.00 45.47 2.29
3917 5986 6.328714 TGCAAACATGTATGCGTGATATTTT 58.671 32.000 10.22 0.00 45.47 1.82
3918 5987 5.889219 TGCAAACATGTATGCGTGATATTT 58.111 33.333 10.22 0.00 45.47 1.40
3919 5988 5.497635 TGCAAACATGTATGCGTGATATT 57.502 34.783 10.22 0.00 45.47 1.28
3920 5989 5.497635 TTGCAAACATGTATGCGTGATAT 57.502 34.783 10.22 0.00 45.47 1.63
3921 5990 4.954092 TTGCAAACATGTATGCGTGATA 57.046 36.364 10.22 0.00 45.47 2.15
3922 5991 3.846423 TTGCAAACATGTATGCGTGAT 57.154 38.095 10.22 0.00 45.47 3.06
3923 5992 3.632855 TTTGCAAACATGTATGCGTGA 57.367 38.095 8.05 0.00 45.47 4.35
3924 5993 3.674281 ACATTTGCAAACATGTATGCGTG 59.326 39.130 15.41 7.26 45.47 5.34
3925 5994 3.674281 CACATTTGCAAACATGTATGCGT 59.326 39.130 15.41 0.00 45.47 5.24
3926 5995 3.674281 ACACATTTGCAAACATGTATGCG 59.326 39.130 22.38 11.83 45.47 4.73
3927 5996 4.448395 ACACACATTTGCAAACATGTATGC 59.552 37.500 22.93 0.00 42.86 3.14
3928 5997 7.668190 CATACACACATTTGCAAACATGTATG 58.332 34.615 29.22 29.22 41.04 2.39
3929 5998 6.310956 GCATACACACATTTGCAAACATGTAT 59.689 34.615 22.93 22.32 35.22 2.29
3930 5999 5.632764 GCATACACACATTTGCAAACATGTA 59.367 36.000 22.93 21.44 35.22 2.29
3931 6000 4.448395 GCATACACACATTTGCAAACATGT 59.552 37.500 15.41 17.95 35.22 3.21
3932 6001 4.433152 CGCATACACACATTTGCAAACATG 60.433 41.667 15.41 17.30 34.80 3.21
3933 6002 3.674281 CGCATACACACATTTGCAAACAT 59.326 39.130 15.41 2.21 34.80 2.71
3934 6003 3.048501 CGCATACACACATTTGCAAACA 58.951 40.909 15.41 0.00 34.80 2.83
3935 6004 3.049206 ACGCATACACACATTTGCAAAC 58.951 40.909 15.41 0.00 34.80 2.93
3936 6005 3.243201 TGACGCATACACACATTTGCAAA 60.243 39.130 15.44 15.44 34.80 3.68
3937 6006 2.291741 TGACGCATACACACATTTGCAA 59.708 40.909 0.00 0.00 34.80 4.08
3938 6007 1.876156 TGACGCATACACACATTTGCA 59.124 42.857 0.00 0.00 34.80 4.08
3939 6008 2.241722 GTGACGCATACACACATTTGC 58.758 47.619 0.00 0.00 38.05 3.68
3940 6009 3.534524 TGTGACGCATACACACATTTG 57.465 42.857 0.00 0.00 42.20 2.32
3941 6010 4.036262 ACTTTGTGACGCATACACACATTT 59.964 37.500 7.02 0.00 45.82 2.32
3942 6011 3.563808 ACTTTGTGACGCATACACACATT 59.436 39.130 7.02 0.00 45.82 2.71
3943 6012 3.138304 ACTTTGTGACGCATACACACAT 58.862 40.909 7.02 0.00 45.82 3.21
3944 6013 2.556257 ACTTTGTGACGCATACACACA 58.444 42.857 7.02 0.00 45.82 3.72
3945 6014 3.602390 AACTTTGTGACGCATACACAC 57.398 42.857 7.02 0.00 45.82 3.82
3946 6015 4.346970 CAAAACTTTGTGACGCATACACA 58.653 39.130 0.00 0.00 44.76 3.72
3947 6016 4.929315 CAAAACTTTGTGACGCATACAC 57.071 40.909 0.00 0.00 38.55 2.90
3958 6027 8.831715 AAGACATTCTTTTCACAAAACTTTGT 57.168 26.923 1.94 1.94 41.98 2.83
3973 6042 6.751888 CGGAGACAAAACAAAAAGACATTCTT 59.248 34.615 0.00 0.00 38.59 2.52
3974 6043 6.265577 CGGAGACAAAACAAAAAGACATTCT 58.734 36.000 0.00 0.00 0.00 2.40
3975 6044 5.051708 GCGGAGACAAAACAAAAAGACATTC 60.052 40.000 0.00 0.00 0.00 2.67
3976 6045 4.803613 GCGGAGACAAAACAAAAAGACATT 59.196 37.500 0.00 0.00 0.00 2.71
3977 6046 4.142271 TGCGGAGACAAAACAAAAAGACAT 60.142 37.500 0.00 0.00 0.00 3.06
3978 6047 3.191581 TGCGGAGACAAAACAAAAAGACA 59.808 39.130 0.00 0.00 0.00 3.41
3979 6048 3.765026 TGCGGAGACAAAACAAAAAGAC 58.235 40.909 0.00 0.00 0.00 3.01
3980 6049 4.442375 TTGCGGAGACAAAACAAAAAGA 57.558 36.364 0.00 0.00 0.00 2.52
3981 6050 5.523013 TTTTGCGGAGACAAAACAAAAAG 57.477 34.783 0.00 0.00 42.88 2.27
3982 6051 5.924475 TTTTTGCGGAGACAAAACAAAAA 57.076 30.435 7.61 7.61 46.28 1.94
4018 6087 9.555727 TGTCTTAAAACACTATTTAGAAGCACT 57.444 29.630 0.00 0.00 0.00 4.40
4058 6127 6.112058 ACTTTTCTTGTAGCCAATGCAAAAA 58.888 32.000 0.00 0.00 41.13 1.94
4059 6128 5.669477 ACTTTTCTTGTAGCCAATGCAAAA 58.331 33.333 0.00 0.00 41.13 2.44
4061 6130 4.935352 ACTTTTCTTGTAGCCAATGCAA 57.065 36.364 0.00 0.00 41.13 4.08
4062 6131 4.935352 AACTTTTCTTGTAGCCAATGCA 57.065 36.364 0.00 0.00 41.13 3.96
4063 6132 7.889589 AAATAACTTTTCTTGTAGCCAATGC 57.110 32.000 0.00 0.00 37.95 3.56
4079 6148 8.974408 GCATAAAGTTTCACGGAAAAATAACTT 58.026 29.630 0.00 0.00 37.41 2.66
4080 6149 8.138712 TGCATAAAGTTTCACGGAAAAATAACT 58.861 29.630 0.00 0.00 33.14 2.24
4082 6151 7.113684 CGTGCATAAAGTTTCACGGAAAAATAA 59.886 33.333 16.45 0.00 45.76 1.40
4083 6152 6.579292 CGTGCATAAAGTTTCACGGAAAAATA 59.421 34.615 16.45 0.00 45.76 1.40
4084 6153 5.401079 CGTGCATAAAGTTTCACGGAAAAAT 59.599 36.000 16.45 0.00 45.76 1.82
4086 6155 4.283678 CGTGCATAAAGTTTCACGGAAAA 58.716 39.130 16.45 0.00 45.76 2.29
4088 6157 3.529634 CGTGCATAAAGTTTCACGGAA 57.470 42.857 16.45 0.00 45.76 4.30
4092 6161 2.993545 TGTGCGTGCATAAAGTTTCAC 58.006 42.857 0.00 0.00 0.00 3.18
4093 6162 3.913548 ATGTGCGTGCATAAAGTTTCA 57.086 38.095 0.00 0.00 0.00 2.69
4094 6163 6.143118 TGTTTTATGTGCGTGCATAAAGTTTC 59.857 34.615 18.54 13.66 45.91 2.78
4095 6164 5.980116 TGTTTTATGTGCGTGCATAAAGTTT 59.020 32.000 18.54 0.00 45.91 2.66
4096 6165 5.524284 TGTTTTATGTGCGTGCATAAAGTT 58.476 33.333 18.54 0.00 45.91 2.66
4097 6166 5.114785 TGTTTTATGTGCGTGCATAAAGT 57.885 34.783 18.54 0.00 45.91 2.66
4098 6167 5.004630 CCATGTTTTATGTGCGTGCATAAAG 59.995 40.000 18.54 11.62 45.91 1.85
4099 6168 4.861462 CCATGTTTTATGTGCGTGCATAAA 59.139 37.500 16.73 16.73 44.64 1.40
4100 6169 4.156739 TCCATGTTTTATGTGCGTGCATAA 59.843 37.500 0.00 8.87 38.94 1.90
4101 6170 3.691609 TCCATGTTTTATGTGCGTGCATA 59.308 39.130 0.00 0.00 0.00 3.14
4102 6171 2.491298 TCCATGTTTTATGTGCGTGCAT 59.509 40.909 0.00 0.12 0.00 3.96
4103 6172 1.882623 TCCATGTTTTATGTGCGTGCA 59.117 42.857 0.00 0.00 0.00 4.57
4104 6173 2.161410 TCTCCATGTTTTATGTGCGTGC 59.839 45.455 0.00 0.00 0.00 5.34
4105 6174 3.188254 TGTCTCCATGTTTTATGTGCGTG 59.812 43.478 0.00 0.00 0.00 5.34
4106 6175 3.407698 TGTCTCCATGTTTTATGTGCGT 58.592 40.909 0.00 0.00 0.00 5.24
4107 6176 4.621068 ATGTCTCCATGTTTTATGTGCG 57.379 40.909 0.00 0.00 0.00 5.34
4108 6177 5.356751 TGGTATGTCTCCATGTTTTATGTGC 59.643 40.000 0.00 0.00 32.29 4.57
4109 6178 6.458751 GCTGGTATGTCTCCATGTTTTATGTG 60.459 42.308 0.00 0.00 34.26 3.21
4110 6179 5.590259 GCTGGTATGTCTCCATGTTTTATGT 59.410 40.000 0.00 0.00 34.26 2.29
4111 6180 5.277490 CGCTGGTATGTCTCCATGTTTTATG 60.277 44.000 0.00 0.00 34.26 1.90
4112 6181 4.816385 CGCTGGTATGTCTCCATGTTTTAT 59.184 41.667 0.00 0.00 34.26 1.40
4113 6182 4.188462 CGCTGGTATGTCTCCATGTTTTA 58.812 43.478 0.00 0.00 34.26 1.52
4114 6183 3.009723 CGCTGGTATGTCTCCATGTTTT 58.990 45.455 0.00 0.00 34.26 2.43
4115 6184 2.632377 CGCTGGTATGTCTCCATGTTT 58.368 47.619 0.00 0.00 34.26 2.83
4116 6185 1.743772 GCGCTGGTATGTCTCCATGTT 60.744 52.381 0.00 0.00 34.26 2.71
4117 6186 0.179073 GCGCTGGTATGTCTCCATGT 60.179 55.000 0.00 0.00 34.26 3.21
4118 6187 0.179076 TGCGCTGGTATGTCTCCATG 60.179 55.000 9.73 0.00 34.26 3.66
4119 6188 0.541392 TTGCGCTGGTATGTCTCCAT 59.459 50.000 9.73 0.00 34.26 3.41
4120 6189 0.541392 ATTGCGCTGGTATGTCTCCA 59.459 50.000 9.73 0.00 0.00 3.86
4121 6190 1.668419 AATTGCGCTGGTATGTCTCC 58.332 50.000 9.73 0.00 0.00 3.71
4122 6191 3.764885 AAAATTGCGCTGGTATGTCTC 57.235 42.857 9.73 0.00 0.00 3.36
4161 6230 6.211785 ACCCACTTTGGAAAACACTTTTCTAA 59.788 34.615 7.26 5.14 46.31 2.10
4162 6231 5.717654 ACCCACTTTGGAAAACACTTTTCTA 59.282 36.000 7.26 0.00 46.31 2.10
4163 6232 4.530553 ACCCACTTTGGAAAACACTTTTCT 59.469 37.500 7.26 0.00 46.31 2.52
4164 6233 4.827692 ACCCACTTTGGAAAACACTTTTC 58.172 39.130 0.00 0.00 46.36 2.29
4165 6234 4.901197 ACCCACTTTGGAAAACACTTTT 57.099 36.364 0.00 0.00 40.96 2.27
4166 6235 4.284746 TGAACCCACTTTGGAAAACACTTT 59.715 37.500 0.00 0.00 40.96 2.66
4167 6236 3.835395 TGAACCCACTTTGGAAAACACTT 59.165 39.130 0.00 0.00 40.96 3.16
4168 6237 3.436243 TGAACCCACTTTGGAAAACACT 58.564 40.909 0.00 0.00 40.96 3.55
4169 6238 3.878160 TGAACCCACTTTGGAAAACAC 57.122 42.857 0.00 0.00 40.96 3.32
4170 6239 5.600484 ACATATGAACCCACTTTGGAAAACA 59.400 36.000 10.38 0.00 40.96 2.83
4171 6240 6.096673 ACATATGAACCCACTTTGGAAAAC 57.903 37.500 10.38 0.00 40.96 2.43
4172 6241 6.209788 GGTACATATGAACCCACTTTGGAAAA 59.790 38.462 10.38 0.00 40.96 2.29
4173 6242 5.712917 GGTACATATGAACCCACTTTGGAAA 59.287 40.000 10.38 0.00 40.96 3.13
4174 6243 5.258051 GGTACATATGAACCCACTTTGGAA 58.742 41.667 10.38 0.00 40.96 3.53
4175 6244 4.850680 GGTACATATGAACCCACTTTGGA 58.149 43.478 10.38 0.00 40.96 3.53
4184 6253 2.171027 TGAACCCGGGTACATATGAACC 59.829 50.000 30.52 7.31 34.85 3.62
4185 6254 3.547054 TGAACCCGGGTACATATGAAC 57.453 47.619 30.52 10.22 0.00 3.18
4186 6255 3.971305 AGATGAACCCGGGTACATATGAA 59.029 43.478 30.52 6.75 0.00 2.57
4187 6256 3.583228 AGATGAACCCGGGTACATATGA 58.417 45.455 30.52 4.87 0.00 2.15
4188 6257 5.419542 CATAGATGAACCCGGGTACATATG 58.580 45.833 30.52 23.94 0.00 1.78
4189 6258 4.081087 GCATAGATGAACCCGGGTACATAT 60.081 45.833 30.52 18.50 0.00 1.78
4190 6259 3.259876 GCATAGATGAACCCGGGTACATA 59.740 47.826 30.52 15.92 0.00 2.29
4191 6260 2.038557 GCATAGATGAACCCGGGTACAT 59.961 50.000 30.52 12.45 0.00 2.29
4192 6261 1.414919 GCATAGATGAACCCGGGTACA 59.585 52.381 30.52 8.94 0.00 2.90
4193 6262 1.414919 TGCATAGATGAACCCGGGTAC 59.585 52.381 30.52 18.41 0.00 3.34
4194 6263 1.414919 GTGCATAGATGAACCCGGGTA 59.585 52.381 30.52 13.83 29.69 3.69
4195 6264 0.180406 GTGCATAGATGAACCCGGGT 59.820 55.000 24.16 24.16 29.69 5.28
4196 6265 0.469917 AGTGCATAGATGAACCCGGG 59.530 55.000 22.25 22.25 37.01 5.73
4197 6266 2.158900 AGAAGTGCATAGATGAACCCGG 60.159 50.000 0.00 0.00 37.01 5.73
4198 6267 3.126831 GAGAAGTGCATAGATGAACCCG 58.873 50.000 0.00 0.00 37.01 5.28
4199 6268 3.126831 CGAGAAGTGCATAGATGAACCC 58.873 50.000 0.00 0.00 37.01 4.11
4200 6269 3.126831 CCGAGAAGTGCATAGATGAACC 58.873 50.000 0.00 0.00 37.01 3.62
4201 6270 2.541762 GCCGAGAAGTGCATAGATGAAC 59.458 50.000 0.00 0.00 36.55 3.18
4202 6271 2.168313 TGCCGAGAAGTGCATAGATGAA 59.832 45.455 0.00 0.00 31.31 2.57
4203 6272 1.756538 TGCCGAGAAGTGCATAGATGA 59.243 47.619 0.00 0.00 31.31 2.92
4204 6273 2.229675 TGCCGAGAAGTGCATAGATG 57.770 50.000 0.00 0.00 31.31 2.90
4205 6274 2.988010 TTGCCGAGAAGTGCATAGAT 57.012 45.000 0.00 0.00 37.33 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.