Multiple sequence alignment - TraesCS4A01G125600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G125600 chr4A 100.000 7993 0 0 1 7993 162072623 162080615 0.000000e+00 14761.0
1 TraesCS4A01G125600 chr4A 99.722 360 1 0 7634 7993 69309824 69310183 0.000000e+00 660.0
2 TraesCS4A01G125600 chr4D 95.751 3295 107 16 1 3272 314407037 314403753 0.000000e+00 5278.0
3 TraesCS4A01G125600 chr4D 94.862 2530 68 25 5113 7635 314403747 314401273 0.000000e+00 3895.0
4 TraesCS4A01G125600 chr4D 88.889 54 4 2 7319 7371 1397496 1397444 1.860000e-06 65.8
5 TraesCS4A01G125600 chr4B 95.632 3297 108 16 1 3272 392112967 392109682 0.000000e+00 5258.0
6 TraesCS4A01G125600 chr4B 94.905 2532 97 15 5113 7637 392109676 392107170 0.000000e+00 3932.0
7 TraesCS4A01G125600 chr3A 99.725 1819 5 0 3290 5108 665994569 665992751 0.000000e+00 3332.0
8 TraesCS4A01G125600 chr3A 99.167 360 3 0 7634 7993 600669344 600668985 0.000000e+00 649.0
9 TraesCS4A01G125600 chr5A 99.615 1818 6 1 3290 5107 19079250 19081066 0.000000e+00 3317.0
10 TraesCS4A01G125600 chr1A 99.505 1820 9 0 3290 5109 319313778 319311959 0.000000e+00 3312.0
11 TraesCS4A01G125600 chr1A 95.485 1816 80 2 3290 5105 588760662 588758849 0.000000e+00 2898.0
12 TraesCS4A01G125600 chr5B 98.406 1819 29 0 3290 5108 15663585 15661767 0.000000e+00 3199.0
13 TraesCS4A01G125600 chr5B 100.000 364 0 0 7630 7993 483018053 483018416 0.000000e+00 673.0
14 TraesCS4A01G125600 chr6A 98.187 1820 28 1 3290 5109 199996940 199998754 0.000000e+00 3173.0
15 TraesCS4A01G125600 chr7B 95.989 1820 71 1 3290 5109 199989523 199991340 0.000000e+00 2955.0
16 TraesCS4A01G125600 chr7A 95.712 1819 76 2 3290 5108 483968905 483967089 0.000000e+00 2926.0
17 TraesCS4A01G125600 chr2A 95.377 1817 84 0 3290 5106 51987557 51989373 0.000000e+00 2891.0
18 TraesCS4A01G125600 chr2A 100.000 361 0 0 7633 7993 663311617 663311977 0.000000e+00 667.0
19 TraesCS4A01G125600 chr2A 99.723 361 1 0 7633 7993 662978880 662978520 0.000000e+00 662.0
20 TraesCS4A01G125600 chr2A 99.169 361 3 0 7633 7993 550531204 550530844 0.000000e+00 651.0
21 TraesCS4A01G125600 chrUn 98.985 394 4 0 5753 6146 479501494 479501887 0.000000e+00 706.0
22 TraesCS4A01G125600 chr6B 94.737 361 18 1 7634 7993 195111828 195111468 1.950000e-155 560.0
23 TraesCS4A01G125600 chr6B 94.722 360 19 0 7634 7993 380484720 380485079 1.950000e-155 560.0
24 TraesCS4A01G125600 chr2D 92.371 367 20 1 7634 7992 623301539 623301173 4.280000e-142 516.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G125600 chr4A 162072623 162080615 7992 False 14761.0 14761 100.0000 1 7993 1 chr4A.!!$F2 7992
1 TraesCS4A01G125600 chr4D 314401273 314407037 5764 True 4586.5 5278 95.3065 1 7635 2 chr4D.!!$R2 7634
2 TraesCS4A01G125600 chr4B 392107170 392112967 5797 True 4595.0 5258 95.2685 1 7637 2 chr4B.!!$R1 7636
3 TraesCS4A01G125600 chr3A 665992751 665994569 1818 True 3332.0 3332 99.7250 3290 5108 1 chr3A.!!$R2 1818
4 TraesCS4A01G125600 chr5A 19079250 19081066 1816 False 3317.0 3317 99.6150 3290 5107 1 chr5A.!!$F1 1817
5 TraesCS4A01G125600 chr1A 319311959 319313778 1819 True 3312.0 3312 99.5050 3290 5109 1 chr1A.!!$R1 1819
6 TraesCS4A01G125600 chr1A 588758849 588760662 1813 True 2898.0 2898 95.4850 3290 5105 1 chr1A.!!$R2 1815
7 TraesCS4A01G125600 chr5B 15661767 15663585 1818 True 3199.0 3199 98.4060 3290 5108 1 chr5B.!!$R1 1818
8 TraesCS4A01G125600 chr6A 199996940 199998754 1814 False 3173.0 3173 98.1870 3290 5109 1 chr6A.!!$F1 1819
9 TraesCS4A01G125600 chr7B 199989523 199991340 1817 False 2955.0 2955 95.9890 3290 5109 1 chr7B.!!$F1 1819
10 TraesCS4A01G125600 chr7A 483967089 483968905 1816 True 2926.0 2926 95.7120 3290 5108 1 chr7A.!!$R1 1818
11 TraesCS4A01G125600 chr2A 51987557 51989373 1816 False 2891.0 2891 95.3770 3290 5106 1 chr2A.!!$F1 1816

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
430 432 0.036164 TTGTCATGCGGGCTGTAAGT 59.964 50.000 0.00 0.0 35.30 2.24 F
1146 1158 1.580658 TGGATCTAGGTGTGAGGGGAT 59.419 52.381 0.00 0.0 0.00 3.85 F
2238 2253 1.066573 CAATGGCTTCTCGGACTGTCT 60.067 52.381 7.85 0.0 0.00 3.41 F
3283 3311 0.032615 TGTGCTGTCAACCCCCTTTT 60.033 50.000 0.00 0.0 0.00 2.27 F
3284 3312 1.215673 TGTGCTGTCAACCCCCTTTTA 59.784 47.619 0.00 0.0 0.00 1.52 F
3287 3315 2.100197 GCTGTCAACCCCCTTTTATCC 58.900 52.381 0.00 0.0 0.00 2.59 F
3288 3316 2.556559 GCTGTCAACCCCCTTTTATCCA 60.557 50.000 0.00 0.0 0.00 3.41 F
4323 4352 3.248363 GCAAGGCTTTGGACAACAATTTC 59.752 43.478 10.89 0.0 39.21 2.17 F
4752 4781 3.403228 ACCATTTGGCTGGGAATACAT 57.597 42.857 0.00 0.0 40.85 2.29 F
5699 5728 3.482436 TGGGTTTGACATACCAACACTC 58.518 45.455 15.81 0.0 37.40 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1421 1435 1.075542 CAAATACTCGCAAGGCACGA 58.924 50.000 0.00 0.00 38.02 4.35 R
2501 2523 0.110056 AACGCGCTCAAAGAAGCATG 60.110 50.000 5.73 0.00 42.62 4.06 R
3284 3312 0.108615 CCAGTCTCGAAAGCGTGGAT 60.109 55.000 0.00 0.00 38.98 3.41 R
5109 5138 0.306840 CACAGCAGTTGACAGCACAG 59.693 55.000 1.40 0.00 0.00 3.66 R
5110 5139 0.392863 ACACAGCAGTTGACAGCACA 60.393 50.000 1.40 0.00 0.00 4.57 R
5215 5244 1.333619 CCTTGGTGACAGTTTTGGACG 59.666 52.381 0.00 0.00 44.54 4.79 R
5266 5295 2.040813 AGCAGCCTGAAAATTCTGGAGA 59.959 45.455 19.59 0.00 45.89 3.71 R
5718 5747 0.527385 CAACACCACAAAACTGCCCG 60.527 55.000 0.00 0.00 0.00 6.13 R
5748 5777 0.893270 TGTGAAAATCCACAGGGCCG 60.893 55.000 0.00 0.00 41.63 6.13 R
7128 7161 0.179051 GCCTTCTCTGCTGATGAGGG 60.179 60.000 18.08 15.52 32.78 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 3.334583 TCTCAACTGGCTGGATTACAC 57.665 47.619 0.00 0.00 0.00 2.90
62 63 1.086696 CAACTGGCTGGATTACACGG 58.913 55.000 0.00 0.00 0.00 4.94
79 80 3.840078 ACACGGGTAATACTAAGGGTGTT 59.160 43.478 0.00 0.00 34.00 3.32
108 109 3.743911 TGACGTGTTGCGATTAAAGTCAT 59.256 39.130 0.00 0.00 44.77 3.06
119 120 6.204688 TGCGATTAAAGTCATCTGTTTTCACT 59.795 34.615 0.00 0.00 0.00 3.41
120 121 6.738649 GCGATTAAAGTCATCTGTTTTCACTC 59.261 38.462 0.00 0.00 0.00 3.51
121 122 7.360438 GCGATTAAAGTCATCTGTTTTCACTCT 60.360 37.037 0.00 0.00 0.00 3.24
122 123 7.954248 CGATTAAAGTCATCTGTTTTCACTCTG 59.046 37.037 0.00 0.00 0.00 3.35
123 124 5.429957 AAAGTCATCTGTTTTCACTCTGC 57.570 39.130 0.00 0.00 0.00 4.26
124 125 4.077300 AGTCATCTGTTTTCACTCTGCA 57.923 40.909 0.00 0.00 0.00 4.41
125 126 4.063689 AGTCATCTGTTTTCACTCTGCAG 58.936 43.478 7.63 7.63 0.00 4.41
245 247 5.964758 TGCTTGCTGTTAATTAGGGAAATG 58.035 37.500 0.00 0.00 0.00 2.32
291 293 4.094887 TCAATATTCGGTGCTTCTTTGAGC 59.905 41.667 0.00 0.00 43.00 4.26
394 396 7.615582 TGATTGTATCAGATTTGTTCCACTC 57.384 36.000 0.00 0.00 33.59 3.51
430 432 0.036164 TTGTCATGCGGGCTGTAAGT 59.964 50.000 0.00 0.00 35.30 2.24
503 505 6.808704 GTCTCCAATTCTTTGCTATTGTTTCC 59.191 38.462 0.00 0.00 31.38 3.13
524 526 3.001736 CCTAAGATTAGCTTGCAAGTCGC 59.998 47.826 26.55 14.33 37.42 5.19
553 555 2.258726 GGTTGGCTCCGTGTGGAAC 61.259 63.158 0.00 0.00 45.87 3.62
562 564 3.857052 CTCCGTGTGGAACTTATGCTTA 58.143 45.455 0.00 0.00 45.87 3.09
567 569 5.382303 CGTGTGGAACTTATGCTTAAACTG 58.618 41.667 0.00 0.00 38.04 3.16
613 615 5.312895 TGGTGCTTTGATGCTAAAAGAGTA 58.687 37.500 9.57 0.00 36.88 2.59
715 717 2.353605 GCCATGTTACATGTGTTTGGGG 60.354 50.000 21.84 7.08 0.00 4.96
716 718 2.233431 CCATGTTACATGTGTTTGGGGG 59.767 50.000 21.84 1.81 0.00 5.40
742 752 7.438160 GGTGGCATTAGGATTTATTTTGCTAAC 59.562 37.037 0.00 0.00 31.10 2.34
827 837 4.884961 ACACCTATGTCCTCTCTTACCAT 58.115 43.478 0.00 0.00 31.55 3.55
837 847 7.060421 TGTCCTCTCTTACCATGAAACTTTTT 58.940 34.615 0.00 0.00 0.00 1.94
862 872 4.133820 TGCTGCAGCTTTACTTTCAGTTA 58.866 39.130 36.61 10.85 42.66 2.24
892 902 7.704578 TCTTGTAGTTAATACTGAGACTGCT 57.295 36.000 0.00 0.00 35.78 4.24
893 903 7.763356 TCTTGTAGTTAATACTGAGACTGCTC 58.237 38.462 0.00 0.00 35.78 4.26
894 904 7.612244 TCTTGTAGTTAATACTGAGACTGCTCT 59.388 37.037 0.00 0.00 35.89 4.09
895 905 7.089770 TGTAGTTAATACTGAGACTGCTCTG 57.910 40.000 0.00 0.00 43.43 3.35
977 989 2.843730 TGATTCTGATCCGGAAAGGGAA 59.156 45.455 9.01 11.37 40.09 3.97
990 1002 4.048504 GGAAAGGGAAAACGTGTGAATTG 58.951 43.478 0.00 0.00 0.00 2.32
993 1005 2.428890 AGGGAAAACGTGTGAATTGCAA 59.571 40.909 0.00 0.00 0.00 4.08
1046 1058 8.723311 CATAAATTTTCCAGCAAATTGATGTGT 58.277 29.630 10.46 0.00 38.84 3.72
1063 1075 3.212685 TGTGTGATGTTGCACTTGATCA 58.787 40.909 0.00 0.00 39.49 2.92
1067 1079 5.344128 GTGTGATGTTGCACTTGATCATTTC 59.656 40.000 0.00 0.00 39.49 2.17
1083 1095 4.318332 TCATTTCGGCCATGAGTCATATC 58.682 43.478 5.03 0.32 0.00 1.63
1091 1103 6.266786 TCGGCCATGAGTCATATCTTTACTTA 59.733 38.462 5.03 0.00 0.00 2.24
1138 1150 4.298626 TGCTAGGATTTGGATCTAGGTGT 58.701 43.478 0.00 0.00 32.66 4.16
1146 1158 1.580658 TGGATCTAGGTGTGAGGGGAT 59.419 52.381 0.00 0.00 0.00 3.85
1196 1208 2.160417 GCCATGTGTAGCTGTCTTGTTC 59.840 50.000 0.00 0.00 0.00 3.18
1278 1292 7.500559 AGAAATGATTTTAGAGTATGGGCTGTC 59.499 37.037 0.00 0.00 0.00 3.51
1379 1393 8.843885 TCTATCAATAAAGAAGGCATCATCTG 57.156 34.615 0.00 0.00 0.00 2.90
1421 1435 7.576477 GCAGAACTATCTTTTGGCTGAAATTCT 60.576 37.037 0.00 0.00 32.03 2.40
1430 1444 1.135575 GGCTGAAATTCTCGTGCCTTG 60.136 52.381 10.64 0.00 40.87 3.61
1458 1472 4.618378 TTTGGAAATATTGGTAGCCCCT 57.382 40.909 0.00 0.00 0.00 4.79
1613 1627 3.712218 AGGGTCTTTCTTATCCAGCTACC 59.288 47.826 0.00 0.00 0.00 3.18
1633 1647 4.315803 ACCAACGGATATGCTTACTATGC 58.684 43.478 0.00 0.00 0.00 3.14
2120 2135 1.072806 ACCACAGATTTGAGCTCAGCA 59.927 47.619 17.43 8.36 0.00 4.41
2176 2191 1.938585 TCTGTTGCTAGTAGGCCTGT 58.061 50.000 17.99 4.88 0.00 4.00
2238 2253 1.066573 CAATGGCTTCTCGGACTGTCT 60.067 52.381 7.85 0.00 0.00 3.41
2272 2287 2.173356 CAGCTATTGGTTCCTCCCATCA 59.827 50.000 0.00 0.00 33.60 3.07
2516 2538 5.961843 CAGTTTATACATGCTTCTTTGAGCG 59.038 40.000 0.00 0.00 45.64 5.03
2538 2560 3.429085 CGTTGGTGCTGAGAATAATTGC 58.571 45.455 0.00 0.00 0.00 3.56
2568 2590 9.466497 CCTATATGTTAATGTTCATATTGCCCT 57.534 33.333 0.00 0.00 38.01 5.19
2635 2657 4.816385 CAGCACTGACTACTGAAAGGAAAA 59.184 41.667 0.00 0.00 39.30 2.29
2636 2658 5.296780 CAGCACTGACTACTGAAAGGAAAAA 59.703 40.000 0.00 0.00 39.30 1.94
2696 2718 6.259550 ACTTTGTGAATAGAGTGCATTTCC 57.740 37.500 0.00 0.00 0.00 3.13
2814 2836 1.746615 CCACGGAGCCAGAACCATG 60.747 63.158 0.00 0.00 0.00 3.66
2880 2904 0.610232 AGAACCATTGCTGTCCCTGC 60.610 55.000 0.00 0.00 0.00 4.85
3057 3085 2.100916 GCTAGCAAGGGTTGTATCTCGA 59.899 50.000 10.63 0.00 0.00 4.04
3128 3156 5.531287 CCTTAAACAGTTTGCAGGAGTAAGT 59.469 40.000 16.42 0.00 29.98 2.24
3152 3180 8.527810 AGTGTGGTTCTTTGAAATTGTTTCTTA 58.472 29.630 4.32 0.00 40.32 2.10
3193 3221 9.733219 GTAGGTTAGTAGTAAGAGTTATTGCAG 57.267 37.037 0.00 0.00 0.00 4.41
3272 3300 3.919216 ACATAGAGTTCACTGTGCTGTC 58.081 45.455 2.12 0.00 33.41 3.51
3273 3301 3.321968 ACATAGAGTTCACTGTGCTGTCA 59.678 43.478 2.12 0.00 33.41 3.58
3274 3302 2.988010 AGAGTTCACTGTGCTGTCAA 57.012 45.000 2.12 0.00 0.00 3.18
3276 3304 1.599542 GAGTTCACTGTGCTGTCAACC 59.400 52.381 2.12 0.00 0.00 3.77
3277 3305 0.663153 GTTCACTGTGCTGTCAACCC 59.337 55.000 2.12 0.00 0.00 4.11
3278 3306 0.465460 TTCACTGTGCTGTCAACCCC 60.465 55.000 2.12 0.00 0.00 4.95
3279 3307 1.898574 CACTGTGCTGTCAACCCCC 60.899 63.158 0.00 0.00 0.00 5.40
3280 3308 2.078665 ACTGTGCTGTCAACCCCCT 61.079 57.895 0.00 0.00 0.00 4.79
3281 3309 1.151450 CTGTGCTGTCAACCCCCTT 59.849 57.895 0.00 0.00 0.00 3.95
3282 3310 0.468029 CTGTGCTGTCAACCCCCTTT 60.468 55.000 0.00 0.00 0.00 3.11
3283 3311 0.032615 TGTGCTGTCAACCCCCTTTT 60.033 50.000 0.00 0.00 0.00 2.27
3284 3312 1.215673 TGTGCTGTCAACCCCCTTTTA 59.784 47.619 0.00 0.00 0.00 1.52
3285 3313 2.158385 TGTGCTGTCAACCCCCTTTTAT 60.158 45.455 0.00 0.00 0.00 1.40
3286 3314 2.492088 GTGCTGTCAACCCCCTTTTATC 59.508 50.000 0.00 0.00 0.00 1.75
3287 3315 2.100197 GCTGTCAACCCCCTTTTATCC 58.900 52.381 0.00 0.00 0.00 2.59
3288 3316 2.556559 GCTGTCAACCCCCTTTTATCCA 60.557 50.000 0.00 0.00 0.00 3.41
4323 4352 3.248363 GCAAGGCTTTGGACAACAATTTC 59.752 43.478 10.89 0.00 39.21 2.17
4752 4781 3.403228 ACCATTTGGCTGGGAATACAT 57.597 42.857 0.00 0.00 40.85 2.29
5162 5191 5.711506 TCAATCATCAACCATTGCTAACTGT 59.288 36.000 0.00 0.00 31.15 3.55
5179 5208 5.376854 AACTGTTCAAAGTATCATGTGCC 57.623 39.130 0.00 0.00 0.00 5.01
5180 5209 3.758554 ACTGTTCAAAGTATCATGTGCCC 59.241 43.478 0.00 0.00 0.00 5.36
5181 5210 3.758023 CTGTTCAAAGTATCATGTGCCCA 59.242 43.478 0.00 0.00 0.00 5.36
5182 5211 4.148079 TGTTCAAAGTATCATGTGCCCAA 58.852 39.130 0.00 0.00 0.00 4.12
5183 5212 4.586421 TGTTCAAAGTATCATGTGCCCAAA 59.414 37.500 0.00 0.00 0.00 3.28
5184 5213 5.069648 TGTTCAAAGTATCATGTGCCCAAAA 59.930 36.000 0.00 0.00 0.00 2.44
5185 5214 5.999205 TCAAAGTATCATGTGCCCAAAAT 57.001 34.783 0.00 0.00 0.00 1.82
5194 5223 5.916318 TCATGTGCCCAAAATCCAAATATC 58.084 37.500 0.00 0.00 0.00 1.63
5333 5362 5.630121 ACAATGGACAAATTACAGACAGGA 58.370 37.500 0.00 0.00 0.00 3.86
5343 5372 5.552870 ATTACAGACAGGACAGAAGTTGT 57.447 39.130 0.00 0.00 44.55 3.32
5662 5691 7.922505 TGATGTGTTATTGTTTTCTTTTCCG 57.077 32.000 0.00 0.00 0.00 4.30
5699 5728 3.482436 TGGGTTTGACATACCAACACTC 58.518 45.455 15.81 0.00 37.40 3.51
5718 5747 6.631962 ACACTCTCTGTAGGTTAATACAAGC 58.368 40.000 0.00 0.00 35.32 4.01
5748 5777 1.680735 TGTGGTGTTGCTGAAATGGTC 59.319 47.619 0.00 0.00 0.00 4.02
5932 5961 9.612620 GAGATACACAAGAGGTAATTTTTGTTG 57.387 33.333 0.00 0.00 31.84 3.33
6001 6030 6.813649 TGACGTTCATTTCTTCTCCTTAGATG 59.186 38.462 0.00 0.00 0.00 2.90
6142 6171 3.430790 GCAGAAGTTTGGGCAGAAGTTTT 60.431 43.478 0.00 0.00 0.00 2.43
6346 6375 5.009010 ACAAGTACTGAAAAAGGATGCAGTG 59.991 40.000 0.00 0.00 41.31 3.66
6367 6396 1.211703 TCACCTGTTGAGCAACCTGAA 59.788 47.619 10.54 0.00 40.46 3.02
6585 6614 3.991121 CGAAAAGGTCTTTCTCAGGAGTC 59.009 47.826 0.00 0.00 31.45 3.36
6612 6641 0.249615 CACGACCCATCAGATCGCAT 60.250 55.000 0.00 0.00 39.47 4.73
6646 6675 4.310769 CATCTGGGATAACGAAGGATGTC 58.689 47.826 0.00 0.00 0.00 3.06
6668 6697 4.826733 TCAAGGCTACATTGCTCAAGAAAA 59.173 37.500 0.00 0.00 0.00 2.29
6886 6915 9.569122 AAACTGAGTTAAGGAGCAACTAATTTA 57.431 29.630 0.00 0.00 36.38 1.40
6942 6971 4.637483 AACATCTCTGTTTGTGTTGGTG 57.363 40.909 0.00 0.00 43.05 4.17
6979 7008 1.672881 GCTTATGGCTACTGCAGTTGG 59.327 52.381 27.06 18.72 41.91 3.77
7041 7070 3.926058 TTGGTTTGGGTATAGCTCCTC 57.074 47.619 1.32 0.00 0.00 3.71
7079 7108 4.271696 CCAACAAGTGGTCATAGTCTCA 57.728 45.455 0.00 0.00 43.20 3.27
7080 7109 4.248859 CCAACAAGTGGTCATAGTCTCAG 58.751 47.826 0.00 0.00 43.20 3.35
7104 7133 5.402630 AGGTATTTGTGGTGAGGGAAAATT 58.597 37.500 0.00 0.00 0.00 1.82
7114 7147 5.188751 TGGTGAGGGAAAATTGTTTCTGTTT 59.811 36.000 0.00 0.00 42.45 2.83
7115 7148 5.523552 GGTGAGGGAAAATTGTTTCTGTTTG 59.476 40.000 0.00 0.00 42.45 2.93
7116 7149 6.106003 GTGAGGGAAAATTGTTTCTGTTTGT 58.894 36.000 0.00 0.00 42.45 2.83
7117 7150 6.035975 GTGAGGGAAAATTGTTTCTGTTTGTG 59.964 38.462 0.00 0.00 42.45 3.33
7128 7161 1.203523 TCTGTTTGTGGTTGTGTTGGC 59.796 47.619 0.00 0.00 0.00 4.52
7312 7349 6.963117 TCTCCCCTTTGAGATTACCTTTTA 57.037 37.500 0.00 0.00 36.48 1.52
7313 7350 6.958767 TCTCCCCTTTGAGATTACCTTTTAG 58.041 40.000 0.00 0.00 36.48 1.85
7315 7352 6.297068 CTCCCCTTTGAGATTACCTTTTAGGT 60.297 42.308 3.54 3.54 42.44 3.08
7316 7353 7.749348 CTCCCCTTTGAGATTACCTTTTAGGTT 60.749 40.741 3.33 0.00 39.03 3.50
7402 7440 2.500098 CCTAACAGGCTACCAGCTACAA 59.500 50.000 0.00 0.00 41.99 2.41
7403 7441 2.770164 AACAGGCTACCAGCTACAAG 57.230 50.000 0.00 0.00 41.99 3.16
7419 7457 5.766174 AGCTACAAGGAAAAACATAAACCGA 59.234 36.000 0.00 0.00 0.00 4.69
7455 7497 7.148706 CAGAATGAACAGTCAGGCTATCCCT 62.149 48.000 5.15 0.00 42.45 4.20
7560 7602 9.967346 AAAATAAACTTAAGAGGTTTTCAGAGC 57.033 29.630 10.09 0.00 37.88 4.09
7567 7609 3.529533 AGAGGTTTTCAGAGCATCATCG 58.470 45.455 0.00 0.00 37.82 3.84
7584 7626 1.228124 CGTCCTGGGAAGCCACAAA 60.228 57.895 0.00 0.00 0.00 2.83
7632 7674 7.425577 TGAACATCAAGACACAATTCACTAG 57.574 36.000 0.00 0.00 0.00 2.57
7637 7679 7.815068 ACATCAAGACACAATTCACTAGTACTC 59.185 37.037 0.00 0.00 0.00 2.59
7638 7680 6.688578 TCAAGACACAATTCACTAGTACTCC 58.311 40.000 0.00 0.00 0.00 3.85
7639 7681 5.662674 AGACACAATTCACTAGTACTCCC 57.337 43.478 0.00 0.00 0.00 4.30
7640 7682 5.334421 AGACACAATTCACTAGTACTCCCT 58.666 41.667 0.00 0.00 0.00 4.20
7641 7683 5.419471 AGACACAATTCACTAGTACTCCCTC 59.581 44.000 0.00 0.00 0.00 4.30
7642 7684 4.466726 ACACAATTCACTAGTACTCCCTCC 59.533 45.833 0.00 0.00 0.00 4.30
7643 7685 3.700038 ACAATTCACTAGTACTCCCTCCG 59.300 47.826 0.00 0.00 0.00 4.63
7644 7686 3.947612 ATTCACTAGTACTCCCTCCGA 57.052 47.619 0.00 0.00 0.00 4.55
7645 7687 3.947612 TTCACTAGTACTCCCTCCGAT 57.052 47.619 0.00 0.00 0.00 4.18
7646 7688 3.488778 TCACTAGTACTCCCTCCGATC 57.511 52.381 0.00 0.00 0.00 3.69
7647 7689 2.106166 TCACTAGTACTCCCTCCGATCC 59.894 54.545 0.00 0.00 0.00 3.36
7648 7690 1.424684 ACTAGTACTCCCTCCGATCCC 59.575 57.143 0.00 0.00 0.00 3.85
7649 7691 1.424302 CTAGTACTCCCTCCGATCCCA 59.576 57.143 0.00 0.00 0.00 4.37
7650 7692 0.861155 AGTACTCCCTCCGATCCCAT 59.139 55.000 0.00 0.00 0.00 4.00
7651 7693 1.220750 AGTACTCCCTCCGATCCCATT 59.779 52.381 0.00 0.00 0.00 3.16
7652 7694 2.047830 GTACTCCCTCCGATCCCATTT 58.952 52.381 0.00 0.00 0.00 2.32
7653 7695 2.489528 ACTCCCTCCGATCCCATTTA 57.510 50.000 0.00 0.00 0.00 1.40
7654 7696 2.330216 ACTCCCTCCGATCCCATTTAG 58.670 52.381 0.00 0.00 0.00 1.85
7655 7697 2.330216 CTCCCTCCGATCCCATTTAGT 58.670 52.381 0.00 0.00 0.00 2.24
7656 7698 2.300437 CTCCCTCCGATCCCATTTAGTC 59.700 54.545 0.00 0.00 0.00 2.59
7657 7699 2.090719 TCCCTCCGATCCCATTTAGTCT 60.091 50.000 0.00 0.00 0.00 3.24
7658 7700 2.037772 CCCTCCGATCCCATTTAGTCTG 59.962 54.545 0.00 0.00 0.00 3.51
7659 7701 2.548920 CCTCCGATCCCATTTAGTCTGC 60.549 54.545 0.00 0.00 0.00 4.26
7660 7702 1.068588 TCCGATCCCATTTAGTCTGCG 59.931 52.381 0.00 0.00 0.00 5.18
7661 7703 1.202533 CCGATCCCATTTAGTCTGCGT 60.203 52.381 0.00 0.00 0.00 5.24
7662 7704 2.035449 CCGATCCCATTTAGTCTGCGTA 59.965 50.000 0.00 0.00 0.00 4.42
7663 7705 3.306088 CCGATCCCATTTAGTCTGCGTAT 60.306 47.826 0.00 0.00 0.00 3.06
7664 7706 4.082408 CCGATCCCATTTAGTCTGCGTATA 60.082 45.833 0.00 0.00 0.00 1.47
7665 7707 5.466819 CGATCCCATTTAGTCTGCGTATAA 58.533 41.667 0.00 0.00 0.00 0.98
7666 7708 5.345202 CGATCCCATTTAGTCTGCGTATAAC 59.655 44.000 0.00 0.00 0.00 1.89
7667 7709 5.864418 TCCCATTTAGTCTGCGTATAACT 57.136 39.130 0.00 0.00 0.00 2.24
7668 7710 6.229936 TCCCATTTAGTCTGCGTATAACTT 57.770 37.500 0.00 0.00 0.00 2.66
7669 7711 6.646267 TCCCATTTAGTCTGCGTATAACTTT 58.354 36.000 0.00 0.00 0.00 2.66
7670 7712 7.107542 TCCCATTTAGTCTGCGTATAACTTTT 58.892 34.615 0.00 0.00 0.00 2.27
7671 7713 7.608761 TCCCATTTAGTCTGCGTATAACTTTTT 59.391 33.333 0.00 0.00 0.00 1.94
7672 7714 7.908601 CCCATTTAGTCTGCGTATAACTTTTTC 59.091 37.037 0.00 0.00 0.00 2.29
7673 7715 7.908601 CCATTTAGTCTGCGTATAACTTTTTCC 59.091 37.037 0.00 0.00 0.00 3.13
7674 7716 6.973229 TTAGTCTGCGTATAACTTTTTCCC 57.027 37.500 0.00 0.00 0.00 3.97
7675 7717 3.930848 AGTCTGCGTATAACTTTTTCCCG 59.069 43.478 0.00 0.00 0.00 5.14
7676 7718 3.928375 GTCTGCGTATAACTTTTTCCCGA 59.072 43.478 0.00 0.00 0.00 5.14
7677 7719 4.389687 GTCTGCGTATAACTTTTTCCCGAA 59.610 41.667 0.00 0.00 0.00 4.30
7678 7720 4.996122 TCTGCGTATAACTTTTTCCCGAAA 59.004 37.500 0.00 0.00 0.00 3.46
7679 7721 5.469421 TCTGCGTATAACTTTTTCCCGAAAA 59.531 36.000 0.00 0.00 38.40 2.29
7680 7722 6.017275 TCTGCGTATAACTTTTTCCCGAAAAA 60.017 34.615 13.23 13.23 44.98 1.94
7681 7723 6.679843 TGCGTATAACTTTTTCCCGAAAAAT 58.320 32.000 14.05 5.27 45.69 1.82
7682 7724 6.802834 TGCGTATAACTTTTTCCCGAAAAATC 59.197 34.615 14.05 3.46 45.69 2.17
7683 7725 6.252015 GCGTATAACTTTTTCCCGAAAAATCC 59.748 38.462 14.05 1.68 45.69 3.01
7684 7726 6.466730 CGTATAACTTTTTCCCGAAAAATCCG 59.533 38.462 14.05 7.15 45.69 4.18
7685 7727 3.653539 ACTTTTTCCCGAAAAATCCGG 57.346 42.857 14.05 0.00 45.69 5.14
7694 7736 3.405170 CGAAAAATCCGGAATGGTCTG 57.595 47.619 9.01 0.00 39.52 3.51
7695 7737 2.477863 CGAAAAATCCGGAATGGTCTGC 60.478 50.000 9.01 0.00 39.52 4.26
7696 7738 1.094785 AAAATCCGGAATGGTCTGCG 58.905 50.000 9.01 0.00 39.52 5.18
7697 7739 1.376609 AAATCCGGAATGGTCTGCGC 61.377 55.000 9.01 0.00 39.52 6.09
7698 7740 4.812476 TCCGGAATGGTCTGCGCG 62.812 66.667 0.00 0.00 39.52 6.86
7700 7742 3.118454 CGGAATGGTCTGCGCGTT 61.118 61.111 8.43 0.00 0.00 4.84
7701 7743 2.785258 GGAATGGTCTGCGCGTTC 59.215 61.111 8.43 0.81 0.00 3.95
7702 7744 2.395690 GAATGGTCTGCGCGTTCG 59.604 61.111 8.43 0.00 39.07 3.95
7703 7745 3.083600 GAATGGTCTGCGCGTTCGG 62.084 63.158 8.43 0.00 35.95 4.30
7704 7746 3.876589 AATGGTCTGCGCGTTCGGT 62.877 57.895 8.43 0.00 35.95 4.69
7705 7747 3.876589 ATGGTCTGCGCGTTCGGTT 62.877 57.895 8.43 0.00 35.95 4.44
7706 7748 3.774702 GGTCTGCGCGTTCGGTTC 61.775 66.667 8.43 0.00 35.95 3.62
7707 7749 3.033764 GTCTGCGCGTTCGGTTCA 61.034 61.111 8.43 0.00 35.95 3.18
7708 7750 2.733218 TCTGCGCGTTCGGTTCAG 60.733 61.111 8.43 4.48 35.95 3.02
7709 7751 4.430423 CTGCGCGTTCGGTTCAGC 62.430 66.667 8.43 0.00 35.95 4.26
7712 7754 4.072088 CGCGTTCGGTTCAGCCAC 62.072 66.667 0.00 0.00 36.97 5.01
7713 7755 3.723348 GCGTTCGGTTCAGCCACC 61.723 66.667 0.00 0.00 36.97 4.61
7714 7756 3.047877 CGTTCGGTTCAGCCACCC 61.048 66.667 0.00 0.00 36.97 4.61
7715 7757 2.112297 GTTCGGTTCAGCCACCCA 59.888 61.111 0.00 0.00 36.97 4.51
7716 7758 1.303317 GTTCGGTTCAGCCACCCAT 60.303 57.895 0.00 0.00 36.97 4.00
7717 7759 0.893727 GTTCGGTTCAGCCACCCATT 60.894 55.000 0.00 0.00 36.97 3.16
7718 7760 0.608035 TTCGGTTCAGCCACCCATTC 60.608 55.000 0.00 0.00 36.97 2.67
7719 7761 1.002134 CGGTTCAGCCACCCATTCT 60.002 57.895 0.00 0.00 36.97 2.40
7720 7762 0.609131 CGGTTCAGCCACCCATTCTT 60.609 55.000 0.00 0.00 36.97 2.52
7721 7763 1.632589 GGTTCAGCCACCCATTCTTT 58.367 50.000 0.00 0.00 37.17 2.52
7722 7764 1.546029 GGTTCAGCCACCCATTCTTTC 59.454 52.381 0.00 0.00 37.17 2.62
7723 7765 1.546029 GTTCAGCCACCCATTCTTTCC 59.454 52.381 0.00 0.00 0.00 3.13
7724 7766 1.075601 TCAGCCACCCATTCTTTCCT 58.924 50.000 0.00 0.00 0.00 3.36
7725 7767 1.180029 CAGCCACCCATTCTTTCCTG 58.820 55.000 0.00 0.00 0.00 3.86
7726 7768 0.040204 AGCCACCCATTCTTTCCTGG 59.960 55.000 0.00 0.00 0.00 4.45
7727 7769 0.039618 GCCACCCATTCTTTCCTGGA 59.960 55.000 0.00 0.00 34.24 3.86
7728 7770 1.549950 GCCACCCATTCTTTCCTGGAA 60.550 52.381 4.68 4.68 34.24 3.53
7729 7771 2.889756 GCCACCCATTCTTTCCTGGAAT 60.890 50.000 10.45 0.00 34.24 3.01
7730 7772 3.627237 GCCACCCATTCTTTCCTGGAATA 60.627 47.826 10.45 0.00 34.24 1.75
7731 7773 3.954258 CCACCCATTCTTTCCTGGAATAC 59.046 47.826 10.45 0.00 34.24 1.89
7732 7774 3.954258 CACCCATTCTTTCCTGGAATACC 59.046 47.826 10.45 0.00 34.24 2.73
7733 7775 3.052869 ACCCATTCTTTCCTGGAATACCC 60.053 47.826 10.45 0.00 34.24 3.69
7734 7776 3.566351 CCATTCTTTCCTGGAATACCCC 58.434 50.000 10.45 0.00 34.24 4.95
7735 7777 3.205282 CCATTCTTTCCTGGAATACCCCT 59.795 47.826 10.45 0.00 34.24 4.79
7736 7778 4.464947 CATTCTTTCCTGGAATACCCCTC 58.535 47.826 10.45 0.00 32.86 4.30
7737 7779 2.488836 TCTTTCCTGGAATACCCCTCC 58.511 52.381 10.45 0.00 34.81 4.30
7738 7780 2.047296 TCTTTCCTGGAATACCCCTCCT 59.953 50.000 10.45 0.00 33.77 3.69
7739 7781 2.191981 TTCCTGGAATACCCCTCCTC 57.808 55.000 4.68 0.00 33.77 3.71
7740 7782 0.267960 TCCTGGAATACCCCTCCTCC 59.732 60.000 0.00 0.00 33.77 4.30
7741 7783 0.269173 CCTGGAATACCCCTCCTCCT 59.731 60.000 0.00 0.00 33.77 3.69
7742 7784 1.345526 CCTGGAATACCCCTCCTCCTT 60.346 57.143 0.00 0.00 33.77 3.36
7743 7785 2.050918 CTGGAATACCCCTCCTCCTTC 58.949 57.143 0.00 0.00 33.77 3.46
7744 7786 1.049402 GGAATACCCCTCCTCCTTCG 58.951 60.000 0.00 0.00 0.00 3.79
7745 7787 0.393448 GAATACCCCTCCTCCTTCGC 59.607 60.000 0.00 0.00 0.00 4.70
7746 7788 0.031010 AATACCCCTCCTCCTTCGCT 60.031 55.000 0.00 0.00 0.00 4.93
7747 7789 0.031010 ATACCCCTCCTCCTTCGCTT 60.031 55.000 0.00 0.00 0.00 4.68
7748 7790 0.686769 TACCCCTCCTCCTTCGCTTC 60.687 60.000 0.00 0.00 0.00 3.86
7749 7791 2.496817 CCCTCCTCCTTCGCTTCG 59.503 66.667 0.00 0.00 0.00 3.79
7750 7792 2.202810 CCTCCTCCTTCGCTTCGC 60.203 66.667 0.00 0.00 0.00 4.70
7751 7793 2.202810 CTCCTCCTTCGCTTCGCC 60.203 66.667 0.00 0.00 0.00 5.54
7752 7794 2.680352 TCCTCCTTCGCTTCGCCT 60.680 61.111 0.00 0.00 0.00 5.52
7753 7795 2.202810 CCTCCTTCGCTTCGCCTC 60.203 66.667 0.00 0.00 0.00 4.70
7754 7796 2.202810 CTCCTTCGCTTCGCCTCC 60.203 66.667 0.00 0.00 0.00 4.30
7755 7797 2.680352 TCCTTCGCTTCGCCTCCT 60.680 61.111 0.00 0.00 0.00 3.69
7756 7798 2.232298 CTCCTTCGCTTCGCCTCCTT 62.232 60.000 0.00 0.00 0.00 3.36
7757 7799 1.811679 CCTTCGCTTCGCCTCCTTC 60.812 63.158 0.00 0.00 0.00 3.46
7758 7800 1.216710 CTTCGCTTCGCCTCCTTCT 59.783 57.895 0.00 0.00 0.00 2.85
7759 7801 0.804156 CTTCGCTTCGCCTCCTTCTC 60.804 60.000 0.00 0.00 0.00 2.87
7760 7802 1.251527 TTCGCTTCGCCTCCTTCTCT 61.252 55.000 0.00 0.00 0.00 3.10
7761 7803 1.226831 CGCTTCGCCTCCTTCTCTC 60.227 63.158 0.00 0.00 0.00 3.20
7762 7804 1.226831 GCTTCGCCTCCTTCTCTCG 60.227 63.158 0.00 0.00 0.00 4.04
7763 7805 1.226831 CTTCGCCTCCTTCTCTCGC 60.227 63.158 0.00 0.00 0.00 5.03
7764 7806 1.938657 CTTCGCCTCCTTCTCTCGCA 61.939 60.000 0.00 0.00 0.00 5.10
7765 7807 1.323271 TTCGCCTCCTTCTCTCGCAT 61.323 55.000 0.00 0.00 0.00 4.73
7766 7808 1.142748 CGCCTCCTTCTCTCGCATT 59.857 57.895 0.00 0.00 0.00 3.56
7767 7809 0.385751 CGCCTCCTTCTCTCGCATTA 59.614 55.000 0.00 0.00 0.00 1.90
7768 7810 1.202417 CGCCTCCTTCTCTCGCATTAA 60.202 52.381 0.00 0.00 0.00 1.40
7769 7811 2.546795 CGCCTCCTTCTCTCGCATTAAT 60.547 50.000 0.00 0.00 0.00 1.40
7770 7812 3.471680 GCCTCCTTCTCTCGCATTAATT 58.528 45.455 0.00 0.00 0.00 1.40
7771 7813 4.632153 GCCTCCTTCTCTCGCATTAATTA 58.368 43.478 0.00 0.00 0.00 1.40
7772 7814 5.057149 GCCTCCTTCTCTCGCATTAATTAA 58.943 41.667 0.00 0.00 0.00 1.40
7773 7815 5.178438 GCCTCCTTCTCTCGCATTAATTAAG 59.822 44.000 3.94 0.00 0.00 1.85
7774 7816 5.178438 CCTCCTTCTCTCGCATTAATTAAGC 59.822 44.000 3.94 6.78 0.00 3.09
7775 7817 5.057149 TCCTTCTCTCGCATTAATTAAGCC 58.943 41.667 3.94 0.00 0.00 4.35
7776 7818 4.816385 CCTTCTCTCGCATTAATTAAGCCA 59.184 41.667 3.94 0.00 0.00 4.75
7777 7819 5.049818 CCTTCTCTCGCATTAATTAAGCCAG 60.050 44.000 3.94 6.12 0.00 4.85
7778 7820 3.809832 TCTCTCGCATTAATTAAGCCAGC 59.190 43.478 3.94 4.72 0.00 4.85
7779 7821 3.808728 TCTCGCATTAATTAAGCCAGCT 58.191 40.909 3.94 0.00 0.00 4.24
7780 7822 4.956085 TCTCGCATTAATTAAGCCAGCTA 58.044 39.130 3.94 0.00 0.00 3.32
7781 7823 4.991056 TCTCGCATTAATTAAGCCAGCTAG 59.009 41.667 3.94 6.90 0.00 3.42
7782 7824 3.498397 TCGCATTAATTAAGCCAGCTAGC 59.502 43.478 6.62 6.62 0.00 3.42
7784 7826 4.377841 CGCATTAATTAAGCCAGCTAGCTC 60.378 45.833 16.15 4.55 44.11 4.09
7785 7827 4.377841 GCATTAATTAAGCCAGCTAGCTCG 60.378 45.833 16.15 10.16 44.11 5.03
7786 7828 1.587547 AATTAAGCCAGCTAGCTCGC 58.412 50.000 24.86 24.86 44.11 5.03
7787 7829 0.250081 ATTAAGCCAGCTAGCTCGCC 60.250 55.000 27.80 13.22 44.11 5.54
7788 7830 1.330655 TTAAGCCAGCTAGCTCGCCT 61.331 55.000 27.80 19.36 44.11 5.52
7789 7831 1.739338 TAAGCCAGCTAGCTCGCCTC 61.739 60.000 27.80 9.84 44.11 4.70
7790 7832 4.600576 GCCAGCTAGCTCGCCTCC 62.601 72.222 22.24 0.00 0.00 4.30
7791 7833 2.837291 CCAGCTAGCTCGCCTCCT 60.837 66.667 16.15 0.00 0.00 3.69
7792 7834 2.430610 CCAGCTAGCTCGCCTCCTT 61.431 63.158 16.15 0.00 0.00 3.36
7793 7835 1.519719 CAGCTAGCTCGCCTCCTTT 59.480 57.895 16.15 0.00 0.00 3.11
7794 7836 0.107945 CAGCTAGCTCGCCTCCTTTT 60.108 55.000 16.15 0.00 0.00 2.27
7795 7837 0.615850 AGCTAGCTCGCCTCCTTTTT 59.384 50.000 12.68 0.00 0.00 1.94
7796 7838 1.010580 GCTAGCTCGCCTCCTTTTTC 58.989 55.000 7.70 0.00 0.00 2.29
7797 7839 1.406205 GCTAGCTCGCCTCCTTTTTCT 60.406 52.381 7.70 0.00 0.00 2.52
7798 7840 2.937433 GCTAGCTCGCCTCCTTTTTCTT 60.937 50.000 7.70 0.00 0.00 2.52
7799 7841 1.814793 AGCTCGCCTCCTTTTTCTTC 58.185 50.000 0.00 0.00 0.00 2.87
7800 7842 0.805614 GCTCGCCTCCTTTTTCTTCC 59.194 55.000 0.00 0.00 0.00 3.46
7801 7843 1.611936 GCTCGCCTCCTTTTTCTTCCT 60.612 52.381 0.00 0.00 0.00 3.36
7802 7844 2.351455 CTCGCCTCCTTTTTCTTCCTC 58.649 52.381 0.00 0.00 0.00 3.71
7803 7845 1.079503 CGCCTCCTTTTTCTTCCTCG 58.920 55.000 0.00 0.00 0.00 4.63
7804 7846 1.608283 CGCCTCCTTTTTCTTCCTCGT 60.608 52.381 0.00 0.00 0.00 4.18
7805 7847 2.353406 CGCCTCCTTTTTCTTCCTCGTA 60.353 50.000 0.00 0.00 0.00 3.43
7806 7848 3.001414 GCCTCCTTTTTCTTCCTCGTAC 58.999 50.000 0.00 0.00 0.00 3.67
7807 7849 3.556423 GCCTCCTTTTTCTTCCTCGTACA 60.556 47.826 0.00 0.00 0.00 2.90
7808 7850 4.246458 CCTCCTTTTTCTTCCTCGTACAG 58.754 47.826 0.00 0.00 0.00 2.74
7809 7851 4.262506 CCTCCTTTTTCTTCCTCGTACAGT 60.263 45.833 0.00 0.00 0.00 3.55
7810 7852 5.047519 CCTCCTTTTTCTTCCTCGTACAGTA 60.048 44.000 0.00 0.00 0.00 2.74
7811 7853 5.776744 TCCTTTTTCTTCCTCGTACAGTAC 58.223 41.667 0.00 0.00 0.00 2.73
7819 7861 3.763319 CGTACAGTACGCCAGCAC 58.237 61.111 19.79 0.00 45.81 4.40
7820 7862 2.150218 CGTACAGTACGCCAGCACG 61.150 63.158 19.79 0.00 45.81 5.34
7821 7863 2.126228 TACAGTACGCCAGCACGC 60.126 61.111 0.00 0.00 36.19 5.34
7822 7864 2.921797 TACAGTACGCCAGCACGCA 61.922 57.895 0.00 0.00 36.19 5.24
7823 7865 2.220615 TACAGTACGCCAGCACGCAT 62.221 55.000 0.00 0.00 36.19 4.73
7824 7866 2.815211 AGTACGCCAGCACGCATG 60.815 61.111 0.00 0.00 36.19 4.06
7836 7878 3.842923 CGCATGCGTCCTCCTCCT 61.843 66.667 31.33 0.00 34.35 3.69
7837 7879 2.490148 CGCATGCGTCCTCCTCCTA 61.490 63.158 31.33 0.00 34.35 2.94
7838 7880 1.810606 CGCATGCGTCCTCCTCCTAT 61.811 60.000 31.33 0.00 34.35 2.57
7839 7881 0.037790 GCATGCGTCCTCCTCCTATC 60.038 60.000 0.00 0.00 0.00 2.08
7840 7882 1.626686 CATGCGTCCTCCTCCTATCT 58.373 55.000 0.00 0.00 0.00 1.98
7841 7883 2.796557 CATGCGTCCTCCTCCTATCTA 58.203 52.381 0.00 0.00 0.00 1.98
7842 7884 2.273538 TGCGTCCTCCTCCTATCTAC 57.726 55.000 0.00 0.00 0.00 2.59
7843 7885 1.775459 TGCGTCCTCCTCCTATCTACT 59.225 52.381 0.00 0.00 0.00 2.57
7844 7886 2.224572 TGCGTCCTCCTCCTATCTACTC 60.225 54.545 0.00 0.00 0.00 2.59
7845 7887 2.690786 CGTCCTCCTCCTATCTACTCG 58.309 57.143 0.00 0.00 0.00 4.18
7846 7888 2.429478 GTCCTCCTCCTATCTACTCGC 58.571 57.143 0.00 0.00 0.00 5.03
7847 7889 1.351683 TCCTCCTCCTATCTACTCGCC 59.648 57.143 0.00 0.00 0.00 5.54
7848 7890 1.353022 CCTCCTCCTATCTACTCGCCT 59.647 57.143 0.00 0.00 0.00 5.52
7849 7891 2.224917 CCTCCTCCTATCTACTCGCCTT 60.225 54.545 0.00 0.00 0.00 4.35
7850 7892 3.078837 CTCCTCCTATCTACTCGCCTTC 58.921 54.545 0.00 0.00 0.00 3.46
7851 7893 2.712087 TCCTCCTATCTACTCGCCTTCT 59.288 50.000 0.00 0.00 0.00 2.85
7852 7894 3.908733 TCCTCCTATCTACTCGCCTTCTA 59.091 47.826 0.00 0.00 0.00 2.10
7853 7895 4.004982 CCTCCTATCTACTCGCCTTCTAC 58.995 52.174 0.00 0.00 0.00 2.59
7854 7896 4.263156 CCTCCTATCTACTCGCCTTCTACT 60.263 50.000 0.00 0.00 0.00 2.57
7855 7897 4.897140 TCCTATCTACTCGCCTTCTACTC 58.103 47.826 0.00 0.00 0.00 2.59
7856 7898 4.004982 CCTATCTACTCGCCTTCTACTCC 58.995 52.174 0.00 0.00 0.00 3.85
7857 7899 3.579534 ATCTACTCGCCTTCTACTCCA 57.420 47.619 0.00 0.00 0.00 3.86
7858 7900 3.579534 TCTACTCGCCTTCTACTCCAT 57.420 47.619 0.00 0.00 0.00 3.41
7859 7901 3.478509 TCTACTCGCCTTCTACTCCATC 58.521 50.000 0.00 0.00 0.00 3.51
7860 7902 2.445682 ACTCGCCTTCTACTCCATCT 57.554 50.000 0.00 0.00 0.00 2.90
7861 7903 2.741145 ACTCGCCTTCTACTCCATCTT 58.259 47.619 0.00 0.00 0.00 2.40
7862 7904 2.691011 ACTCGCCTTCTACTCCATCTTC 59.309 50.000 0.00 0.00 0.00 2.87
7863 7905 2.955660 CTCGCCTTCTACTCCATCTTCT 59.044 50.000 0.00 0.00 0.00 2.85
7864 7906 3.366396 TCGCCTTCTACTCCATCTTCTT 58.634 45.455 0.00 0.00 0.00 2.52
7865 7907 3.381908 TCGCCTTCTACTCCATCTTCTTC 59.618 47.826 0.00 0.00 0.00 2.87
7866 7908 3.383185 CGCCTTCTACTCCATCTTCTTCT 59.617 47.826 0.00 0.00 0.00 2.85
7867 7909 4.499019 CGCCTTCTACTCCATCTTCTTCTC 60.499 50.000 0.00 0.00 0.00 2.87
7868 7910 4.202212 GCCTTCTACTCCATCTTCTTCTCC 60.202 50.000 0.00 0.00 0.00 3.71
7869 7911 5.208121 CCTTCTACTCCATCTTCTTCTCCT 58.792 45.833 0.00 0.00 0.00 3.69
7870 7912 5.301805 CCTTCTACTCCATCTTCTTCTCCTC 59.698 48.000 0.00 0.00 0.00 3.71
7871 7913 4.798882 TCTACTCCATCTTCTTCTCCTCC 58.201 47.826 0.00 0.00 0.00 4.30
7872 7914 2.758130 ACTCCATCTTCTTCTCCTCCC 58.242 52.381 0.00 0.00 0.00 4.30
7873 7915 2.317594 ACTCCATCTTCTTCTCCTCCCT 59.682 50.000 0.00 0.00 0.00 4.20
7874 7916 2.965147 CTCCATCTTCTTCTCCTCCCTC 59.035 54.545 0.00 0.00 0.00 4.30
7875 7917 2.589664 TCCATCTTCTTCTCCTCCCTCT 59.410 50.000 0.00 0.00 0.00 3.69
7876 7918 2.965147 CCATCTTCTTCTCCTCCCTCTC 59.035 54.545 0.00 0.00 0.00 3.20
7877 7919 3.629539 CCATCTTCTTCTCCTCCCTCTCA 60.630 52.174 0.00 0.00 0.00 3.27
7878 7920 3.835478 TCTTCTTCTCCTCCCTCTCAA 57.165 47.619 0.00 0.00 0.00 3.02
7879 7921 3.707316 TCTTCTTCTCCTCCCTCTCAAG 58.293 50.000 0.00 0.00 0.00 3.02
7880 7922 1.859302 TCTTCTCCTCCCTCTCAAGC 58.141 55.000 0.00 0.00 0.00 4.01
7881 7923 1.360852 TCTTCTCCTCCCTCTCAAGCT 59.639 52.381 0.00 0.00 0.00 3.74
7882 7924 1.756538 CTTCTCCTCCCTCTCAAGCTC 59.243 57.143 0.00 0.00 0.00 4.09
7883 7925 0.707024 TCTCCTCCCTCTCAAGCTCA 59.293 55.000 0.00 0.00 0.00 4.26
7884 7926 1.077828 TCTCCTCCCTCTCAAGCTCAA 59.922 52.381 0.00 0.00 0.00 3.02
7885 7927 1.206849 CTCCTCCCTCTCAAGCTCAAC 59.793 57.143 0.00 0.00 0.00 3.18
7886 7928 0.251634 CCTCCCTCTCAAGCTCAACC 59.748 60.000 0.00 0.00 0.00 3.77
7887 7929 1.274712 CTCCCTCTCAAGCTCAACCT 58.725 55.000 0.00 0.00 0.00 3.50
7888 7930 1.206849 CTCCCTCTCAAGCTCAACCTC 59.793 57.143 0.00 0.00 0.00 3.85
7889 7931 0.979665 CCCTCTCAAGCTCAACCTCA 59.020 55.000 0.00 0.00 0.00 3.86
7890 7932 1.558756 CCCTCTCAAGCTCAACCTCAT 59.441 52.381 0.00 0.00 0.00 2.90
7891 7933 2.630158 CCTCTCAAGCTCAACCTCATG 58.370 52.381 0.00 0.00 0.00 3.07
7892 7934 2.630158 CTCTCAAGCTCAACCTCATGG 58.370 52.381 0.00 0.00 39.83 3.66
7893 7935 2.235650 CTCTCAAGCTCAACCTCATGGA 59.764 50.000 0.00 0.00 37.04 3.41
7894 7936 2.235650 TCTCAAGCTCAACCTCATGGAG 59.764 50.000 0.00 0.00 37.04 3.86
7895 7937 1.980765 TCAAGCTCAACCTCATGGAGT 59.019 47.619 0.00 0.00 37.04 3.85
7896 7938 2.027745 TCAAGCTCAACCTCATGGAGTC 60.028 50.000 0.00 0.00 37.04 3.36
7897 7939 1.949799 AGCTCAACCTCATGGAGTCT 58.050 50.000 0.00 0.00 37.04 3.24
7898 7940 3.107402 AGCTCAACCTCATGGAGTCTA 57.893 47.619 0.00 0.00 37.04 2.59
7899 7941 3.030291 AGCTCAACCTCATGGAGTCTAG 58.970 50.000 0.00 0.00 37.04 2.43
7900 7942 2.482839 GCTCAACCTCATGGAGTCTAGC 60.483 54.545 0.00 0.50 37.04 3.42
7901 7943 3.030291 CTCAACCTCATGGAGTCTAGCT 58.970 50.000 0.00 0.00 37.04 3.32
7902 7944 4.211125 CTCAACCTCATGGAGTCTAGCTA 58.789 47.826 0.00 0.00 37.04 3.32
7903 7945 3.954904 TCAACCTCATGGAGTCTAGCTAC 59.045 47.826 0.00 0.00 37.04 3.58
7904 7946 3.957497 CAACCTCATGGAGTCTAGCTACT 59.043 47.826 0.00 0.00 37.04 2.57
7905 7947 4.258457 ACCTCATGGAGTCTAGCTACTT 57.742 45.455 0.00 0.00 37.04 2.24
7906 7948 3.957497 ACCTCATGGAGTCTAGCTACTTG 59.043 47.826 0.00 6.15 35.23 3.16
7907 7949 3.957497 CCTCATGGAGTCTAGCTACTTGT 59.043 47.826 10.17 0.00 35.39 3.16
7908 7950 4.202101 CCTCATGGAGTCTAGCTACTTGTG 60.202 50.000 10.17 8.56 35.39 3.33
7909 7951 3.701542 TCATGGAGTCTAGCTACTTGTGG 59.298 47.826 10.17 0.00 35.39 4.17
7910 7952 2.457598 TGGAGTCTAGCTACTTGTGGG 58.542 52.381 0.00 0.00 0.00 4.61
7911 7953 2.042569 TGGAGTCTAGCTACTTGTGGGA 59.957 50.000 0.00 0.00 0.00 4.37
7912 7954 3.097614 GGAGTCTAGCTACTTGTGGGAA 58.902 50.000 0.00 0.00 0.00 3.97
7913 7955 3.131400 GGAGTCTAGCTACTTGTGGGAAG 59.869 52.174 0.00 0.00 0.00 3.46
7914 7956 4.017808 GAGTCTAGCTACTTGTGGGAAGA 58.982 47.826 0.00 0.00 0.00 2.87
7915 7957 3.764972 AGTCTAGCTACTTGTGGGAAGAC 59.235 47.826 0.00 0.00 33.86 3.01
7916 7958 3.510360 GTCTAGCTACTTGTGGGAAGACA 59.490 47.826 0.00 0.00 33.86 3.41
7917 7959 3.764434 TCTAGCTACTTGTGGGAAGACAG 59.236 47.826 0.00 0.00 0.00 3.51
7918 7960 1.002544 AGCTACTTGTGGGAAGACAGC 59.997 52.381 0.00 0.00 32.82 4.40
7919 7961 1.946283 GCTACTTGTGGGAAGACAGCC 60.946 57.143 0.00 0.00 0.00 4.85
7920 7962 1.347707 CTACTTGTGGGAAGACAGCCA 59.652 52.381 0.00 0.00 0.00 4.75
7921 7963 0.109342 ACTTGTGGGAAGACAGCCAG 59.891 55.000 0.00 0.00 0.00 4.85
7922 7964 1.228245 TTGTGGGAAGACAGCCAGC 60.228 57.895 0.00 0.00 0.00 4.85
7923 7965 2.360475 GTGGGAAGACAGCCAGCC 60.360 66.667 0.00 0.00 0.00 4.85
7924 7966 2.530151 TGGGAAGACAGCCAGCCT 60.530 61.111 0.00 0.00 0.00 4.58
7933 7975 3.450028 CAGCCAGCCTGTAGAAGAC 57.550 57.895 0.00 0.00 36.79 3.01
7934 7976 0.610174 CAGCCAGCCTGTAGAAGACA 59.390 55.000 0.00 0.00 36.79 3.41
7943 7985 0.448197 TGTAGAAGACAGCGAGCTCG 59.552 55.000 31.37 31.37 36.24 5.03
7944 7986 0.448593 GTAGAAGACAGCGAGCTCGT 59.551 55.000 34.46 19.89 42.22 4.18
7945 7987 0.448197 TAGAAGACAGCGAGCTCGTG 59.552 55.000 34.46 29.79 42.22 4.35
7946 7988 2.431601 AAGACAGCGAGCTCGTGC 60.432 61.111 34.46 20.56 42.22 5.34
7963 8005 1.354506 GCTTGATAGCCTGCTTGCG 59.645 57.895 0.00 0.00 41.74 4.85
7964 8006 2.020131 CTTGATAGCCTGCTTGCGG 58.980 57.895 0.00 0.00 36.02 5.69
7965 8007 0.462581 CTTGATAGCCTGCTTGCGGA 60.463 55.000 2.59 0.00 36.02 5.54
7966 8008 0.462581 TTGATAGCCTGCTTGCGGAG 60.463 55.000 2.59 0.00 36.02 4.63
7972 8014 3.123620 CTGCTTGCGGAGGACAGC 61.124 66.667 0.00 0.00 37.70 4.40
7973 8015 3.889134 CTGCTTGCGGAGGACAGCA 62.889 63.158 1.00 1.00 44.44 4.41
7974 8016 2.437359 GCTTGCGGAGGACAGCAT 60.437 61.111 0.00 0.00 45.29 3.79
7975 8017 2.758089 GCTTGCGGAGGACAGCATG 61.758 63.158 0.00 0.00 45.29 4.06
7976 8018 2.747460 TTGCGGAGGACAGCATGC 60.747 61.111 10.51 10.51 45.29 4.06
7977 8019 3.258228 TTGCGGAGGACAGCATGCT 62.258 57.895 16.30 16.30 45.29 3.79
7978 8020 2.894387 GCGGAGGACAGCATGCTC 60.894 66.667 19.68 7.95 44.87 4.26
7979 8021 2.584418 CGGAGGACAGCATGCTCG 60.584 66.667 19.68 13.70 46.51 5.03
7980 8022 2.894387 GGAGGACAGCATGCTCGC 60.894 66.667 19.68 12.58 46.51 5.03
7981 8023 2.186384 GAGGACAGCATGCTCGCT 59.814 61.111 19.68 7.39 45.21 4.93
7987 8029 2.818714 AGCATGCTCGCTGACTGC 60.819 61.111 16.30 0.00 41.85 4.40
7988 8030 3.122971 GCATGCTCGCTGACTGCA 61.123 61.111 11.37 0.00 43.06 4.41
7989 8031 3.090656 CATGCTCGCTGACTGCAG 58.909 61.111 13.48 13.48 45.13 4.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 7.254932 CCAGTTGAGAAACCAAAAACAAAACAA 60.255 33.333 0.00 0.00 0.00 2.83
60 61 4.095334 GCAAAACACCCTTAGTATTACCCG 59.905 45.833 0.00 0.00 0.00 5.28
62 63 6.769134 ATGCAAAACACCCTTAGTATTACC 57.231 37.500 0.00 0.00 0.00 2.85
79 80 0.378610 TCGCAACACGTCAATGCAAA 59.621 45.000 14.76 2.39 44.19 3.68
108 109 3.461061 CAGACTGCAGAGTGAAAACAGA 58.539 45.455 23.35 0.00 30.16 3.41
122 123 1.975407 AGCCAATGGTGCAGACTGC 60.975 57.895 20.86 20.86 45.29 4.40
123 124 1.880894 CAGCCAATGGTGCAGACTG 59.119 57.895 0.00 0.00 32.48 3.51
124 125 4.410225 CAGCCAATGGTGCAGACT 57.590 55.556 0.00 0.00 32.48 3.24
245 247 8.050778 TGATCAACCATTTAATCACCACTTAC 57.949 34.615 0.00 0.00 0.00 2.34
291 293 3.761657 CATCCATGTCAAAACGTCCATG 58.238 45.455 0.00 0.00 35.56 3.66
381 383 5.163713 GCATAGGTTCTGAGTGGAACAAATC 60.164 44.000 9.12 0.00 45.07 2.17
394 396 6.694411 GCATGACAATTTAAGCATAGGTTCTG 59.306 38.462 0.00 0.00 0.00 3.02
503 505 3.302092 CGCGACTTGCAAGCTAATCTTAG 60.302 47.826 26.27 6.55 46.97 2.18
524 526 1.507141 GAGCCAACCACACAACTCCG 61.507 60.000 0.00 0.00 0.00 4.63
553 555 9.691362 AAACCAACAATACAGTTTAAGCATAAG 57.309 29.630 0.00 0.00 30.94 1.73
562 564 7.891498 AAGACCTAAACCAACAATACAGTTT 57.109 32.000 0.00 0.00 36.47 2.66
567 569 8.799367 ACCAATAAAGACCTAAACCAACAATAC 58.201 33.333 0.00 0.00 0.00 1.89
613 615 3.620374 CAGTATCGATTCTTGCACAAGCT 59.380 43.478 1.71 0.00 42.74 3.74
715 717 5.056480 GCAAAATAAATCCTAATGCCACCC 58.944 41.667 0.00 0.00 0.00 4.61
716 718 5.917462 AGCAAAATAAATCCTAATGCCACC 58.083 37.500 0.00 0.00 32.95 4.61
717 719 8.197439 AGTTAGCAAAATAAATCCTAATGCCAC 58.803 33.333 0.00 0.00 32.95 5.01
742 752 9.788960 GGTAAAATTCAAGAACAATAAGGCTAG 57.211 33.333 0.00 0.00 0.00 3.42
805 815 4.332683 TGGTAAGAGAGGACATAGGTGT 57.667 45.455 0.00 0.00 42.49 4.16
811 821 6.380079 AAGTTTCATGGTAAGAGAGGACAT 57.620 37.500 0.00 0.00 0.00 3.06
837 847 4.362279 CTGAAAGTAAAGCTGCAGCAAAA 58.638 39.130 38.24 20.78 45.16 2.44
977 989 5.344066 TGTATGTTTGCAATTCACACGTTT 58.656 33.333 0.00 0.00 0.00 3.60
990 1002 7.394359 AGGGATATGATTACCATGTATGTTTGC 59.606 37.037 0.00 0.00 36.71 3.68
993 1005 7.890127 CCAAGGGATATGATTACCATGTATGTT 59.110 37.037 0.00 0.00 36.71 2.71
1046 1058 4.379708 CCGAAATGATCAAGTGCAACATCA 60.380 41.667 0.00 0.00 41.43 3.07
1063 1075 4.630644 AGATATGACTCATGGCCGAAAT 57.369 40.909 0.00 0.00 0.00 2.17
1067 1079 4.887748 AGTAAAGATATGACTCATGGCCG 58.112 43.478 0.00 0.00 0.00 6.13
1083 1095 4.870991 GTGCTACCTGCTCCTTAAGTAAAG 59.129 45.833 0.97 0.00 43.37 1.85
1138 1150 0.691078 GAGGTAGCACCATCCCCTCA 60.691 60.000 7.86 0.00 41.95 3.86
1146 1158 4.161876 TGGTTAGTAAAGAGGTAGCACCA 58.838 43.478 7.86 0.00 41.95 4.17
1278 1292 3.076621 TGCAATCTTACTGCAGTTGGAG 58.923 45.455 27.06 19.53 44.67 3.86
1379 1393 3.641437 TCTGCCATGCAAACAACTTAC 57.359 42.857 0.00 0.00 38.41 2.34
1421 1435 1.075542 CAAATACTCGCAAGGCACGA 58.924 50.000 0.00 0.00 38.02 4.35
1430 1444 6.371389 GCTACCAATATTTCCAAATACTCGC 58.629 40.000 0.00 0.00 34.01 5.03
1613 1627 4.389992 CCTGCATAGTAAGCATATCCGTTG 59.610 45.833 0.00 0.00 41.82 4.10
1633 1647 4.712337 AGGAACTAGAGGAACACATACCTG 59.288 45.833 0.00 0.00 36.02 4.00
2120 2135 1.777272 ACAGGAGGCTCCAAAGAAACT 59.223 47.619 33.86 9.14 39.61 2.66
2238 2253 3.603532 CAATAGCTGGACTTGCAGAAGA 58.396 45.455 1.33 0.00 32.98 2.87
2501 2523 0.110056 AACGCGCTCAAAGAAGCATG 60.110 50.000 5.73 0.00 42.62 4.06
2502 2524 0.110056 CAACGCGCTCAAAGAAGCAT 60.110 50.000 5.73 0.00 42.62 3.79
2516 2538 3.429085 CAATTATTCTCAGCACCAACGC 58.571 45.455 0.00 0.00 0.00 4.84
2566 2588 3.877508 GAGAACGGATTCCCATAAACAGG 59.122 47.826 0.00 0.00 35.18 4.00
2568 2590 4.837093 AGAGAACGGATTCCCATAAACA 57.163 40.909 0.00 0.00 35.18 2.83
2696 2718 1.466167 CAAGGGTTCATGCAGTTCTCG 59.534 52.381 0.00 0.00 0.00 4.04
2814 2836 6.128138 ACAGGCCTATGGGAATAGATAAAC 57.872 41.667 3.98 0.00 33.58 2.01
2880 2904 6.483640 GTGGCATATAAGTCTACCCAGAAAAG 59.516 42.308 0.00 0.00 30.85 2.27
2891 2915 2.963101 TGGCTACGTGGCATATAAGTCT 59.037 45.455 25.79 0.00 46.76 3.24
2953 2981 2.746277 GCGACCAAGTGGCGGATT 60.746 61.111 13.48 0.00 39.32 3.01
3057 3085 3.699411 AGACCTCACTAGTCACTACGT 57.301 47.619 0.00 0.00 36.68 3.57
3068 3096 3.845860 TCAGTTTCCAGTAGACCTCACT 58.154 45.455 0.00 0.00 0.00 3.41
3128 3156 9.712305 TTTAAGAAACAATTTCAAAGAACCACA 57.288 25.926 4.25 0.00 42.10 4.17
3193 3221 9.187455 TCGCATAAAAGGTAAATTTCTGAAAAC 57.813 29.630 6.95 1.09 0.00 2.43
3216 3244 7.969387 TCATAAGACAGCAAATAATTTTCGC 57.031 32.000 0.00 0.00 0.00 4.70
3266 3294 2.556559 GGATAAAAGGGGGTTGACAGCA 60.557 50.000 0.00 0.00 0.00 4.41
3272 3300 0.815095 GCGTGGATAAAAGGGGGTTG 59.185 55.000 0.00 0.00 0.00 3.77
3273 3301 0.702316 AGCGTGGATAAAAGGGGGTT 59.298 50.000 0.00 0.00 0.00 4.11
3274 3302 0.702316 AAGCGTGGATAAAAGGGGGT 59.298 50.000 0.00 0.00 0.00 4.95
3276 3304 1.400494 CGAAAGCGTGGATAAAAGGGG 59.600 52.381 0.00 0.00 0.00 4.79
3277 3305 2.351726 CTCGAAAGCGTGGATAAAAGGG 59.648 50.000 0.00 0.00 38.98 3.95
3278 3306 3.062234 GTCTCGAAAGCGTGGATAAAAGG 59.938 47.826 0.00 0.00 38.98 3.11
3279 3307 3.927142 AGTCTCGAAAGCGTGGATAAAAG 59.073 43.478 0.00 0.00 38.98 2.27
3280 3308 3.678072 CAGTCTCGAAAGCGTGGATAAAA 59.322 43.478 0.00 0.00 38.98 1.52
3281 3309 3.250744 CAGTCTCGAAAGCGTGGATAAA 58.749 45.455 0.00 0.00 38.98 1.40
3282 3310 2.416836 CCAGTCTCGAAAGCGTGGATAA 60.417 50.000 0.00 0.00 38.98 1.75
3283 3311 1.134367 CCAGTCTCGAAAGCGTGGATA 59.866 52.381 0.00 0.00 38.98 2.59
3284 3312 0.108615 CCAGTCTCGAAAGCGTGGAT 60.109 55.000 0.00 0.00 38.98 3.41
3285 3313 1.176619 TCCAGTCTCGAAAGCGTGGA 61.177 55.000 0.00 0.00 38.98 4.02
3286 3314 0.108615 ATCCAGTCTCGAAAGCGTGG 60.109 55.000 0.00 0.00 38.98 4.94
3287 3315 2.561733 TATCCAGTCTCGAAAGCGTG 57.438 50.000 0.00 0.00 38.98 5.34
3288 3316 2.034812 GGATATCCAGTCTCGAAAGCGT 59.965 50.000 17.34 0.00 35.88 5.07
5109 5138 0.306840 CACAGCAGTTGACAGCACAG 59.693 55.000 1.40 0.00 0.00 3.66
5110 5139 0.392863 ACACAGCAGTTGACAGCACA 60.393 50.000 1.40 0.00 0.00 4.57
5111 5140 1.581934 TACACAGCAGTTGACAGCAC 58.418 50.000 1.40 0.00 0.00 4.40
5118 5147 3.058983 TGAAGCGAAATACACAGCAGTTG 60.059 43.478 0.00 0.00 0.00 3.16
5121 5150 3.811722 TTGAAGCGAAATACACAGCAG 57.188 42.857 0.00 0.00 0.00 4.24
5162 5191 5.798125 TTTTGGGCACATGATACTTTGAA 57.202 34.783 0.00 0.00 0.00 2.69
5194 5223 8.447833 TGGACGCATAATACTTTGTTTTAAGAG 58.552 33.333 0.00 0.00 0.00 2.85
5215 5244 1.333619 CCTTGGTGACAGTTTTGGACG 59.666 52.381 0.00 0.00 44.54 4.79
5265 5294 2.821969 GCAGCCTGAAAATTCTGGAGAA 59.178 45.455 19.59 0.00 45.89 2.87
5266 5295 2.040813 AGCAGCCTGAAAATTCTGGAGA 59.959 45.455 19.59 0.00 45.89 3.71
5267 5296 2.444421 AGCAGCCTGAAAATTCTGGAG 58.556 47.619 19.59 12.87 45.89 3.86
5333 5362 3.100545 CCACTGGCACAACTTCTGT 57.899 52.632 0.00 0.00 38.70 3.41
5699 5728 4.369182 CCCGCTTGTATTAACCTACAGAG 58.631 47.826 0.00 0.00 33.38 3.35
5718 5747 0.527385 CAACACCACAAAACTGCCCG 60.527 55.000 0.00 0.00 0.00 6.13
5748 5777 0.893270 TGTGAAAATCCACAGGGCCG 60.893 55.000 0.00 0.00 41.63 6.13
5932 5961 2.715046 TGTGATCAATCCTGGCACTTC 58.285 47.619 0.00 0.00 32.70 3.01
5969 5998 6.035112 GGAGAAGAAATGAACGTCATCAGTAC 59.965 42.308 0.00 0.00 35.76 2.73
6001 6030 6.567891 GCATGTTTATTCCCGACTTATAAGGC 60.568 42.308 16.73 12.88 0.00 4.35
6142 6171 4.564821 GCTGGAACATAAGTAAGTCCACCA 60.565 45.833 0.00 0.00 38.20 4.17
6260 6289 2.898705 CTCACAAGCACCACTATCCTC 58.101 52.381 0.00 0.00 0.00 3.71
6346 6375 0.947244 CAGGTTGCTCAACAGGTGAC 59.053 55.000 13.89 0.00 42.85 3.67
6367 6396 4.846779 ATGCCGTTCTGTTTTTACATGT 57.153 36.364 2.69 2.69 0.00 3.21
6408 6437 3.446442 AACAGCCCTCATTCTGTTCAT 57.554 42.857 2.17 0.00 46.98 2.57
6409 6438 2.957402 AACAGCCCTCATTCTGTTCA 57.043 45.000 2.17 0.00 46.98 3.18
6612 6641 1.675310 CCAGATGCACCGCCTTTCA 60.675 57.895 0.00 0.00 0.00 2.69
6646 6675 4.771590 TTTCTTGAGCAATGTAGCCTTG 57.228 40.909 0.00 0.00 34.23 3.61
6784 6813 7.309438 CCATCACCTATAATCTCAGATGACGAA 60.309 40.741 0.00 0.00 34.79 3.85
6886 6915 6.048509 GTCACAACACCCAGAAAATGAAAAT 58.951 36.000 0.00 0.00 0.00 1.82
6891 6920 4.202141 ACATGTCACAACACCCAGAAAATG 60.202 41.667 0.00 0.00 38.48 2.32
6942 6971 0.969149 AGCAAAAGCAGCTAAACCCC 59.031 50.000 0.00 0.00 41.32 4.95
6979 7008 3.063452 TGTCAGTCGTCAAGCTGAAAAAC 59.937 43.478 0.00 0.00 42.51 2.43
7041 7070 8.971321 CACTTGTTGGAGATTATGAAACAAAAG 58.029 33.333 0.00 0.00 39.48 2.27
7075 7104 3.515502 CCTCACCACAAATACCTCTGAGA 59.484 47.826 6.17 0.00 0.00 3.27
7076 7105 3.369892 CCCTCACCACAAATACCTCTGAG 60.370 52.174 0.00 0.00 0.00 3.35
7077 7106 2.571653 CCCTCACCACAAATACCTCTGA 59.428 50.000 0.00 0.00 0.00 3.27
7078 7107 2.571653 TCCCTCACCACAAATACCTCTG 59.428 50.000 0.00 0.00 0.00 3.35
7079 7108 2.915869 TCCCTCACCACAAATACCTCT 58.084 47.619 0.00 0.00 0.00 3.69
7080 7109 3.713826 TTCCCTCACCACAAATACCTC 57.286 47.619 0.00 0.00 0.00 3.85
7104 7133 4.302455 CAACACAACCACAAACAGAAACA 58.698 39.130 0.00 0.00 0.00 2.83
7114 7147 1.454847 GAGGGCCAACACAACCACA 60.455 57.895 6.18 0.00 0.00 4.17
7115 7148 0.827507 ATGAGGGCCAACACAACCAC 60.828 55.000 6.18 0.00 0.00 4.16
7116 7149 0.539438 GATGAGGGCCAACACAACCA 60.539 55.000 6.18 0.00 0.00 3.67
7117 7150 0.539438 TGATGAGGGCCAACACAACC 60.539 55.000 6.18 0.00 0.00 3.77
7128 7161 0.179051 GCCTTCTCTGCTGATGAGGG 60.179 60.000 18.08 15.52 32.78 4.30
7183 7218 9.777008 TGACAGTCCATATATTGGTACCATATA 57.223 33.333 17.17 18.02 46.52 0.86
7184 7219 8.679344 TGACAGTCCATATATTGGTACCATAT 57.321 34.615 17.17 16.58 46.52 1.78
7324 7361 5.880901 AGGGAGCTCTCTTTATCACAAAAA 58.119 37.500 11.38 0.00 0.00 1.94
7357 7394 7.505585 AGGAAGACATTGTGGTTTCTTTAATGA 59.494 33.333 0.00 0.00 33.98 2.57
7402 7440 4.379082 GCATCGTCGGTTTATGTTTTTCCT 60.379 41.667 0.00 0.00 0.00 3.36
7403 7441 3.849708 GCATCGTCGGTTTATGTTTTTCC 59.150 43.478 0.00 0.00 0.00 3.13
7419 7457 4.193865 TGTTCATTCTGATCATGCATCGT 58.806 39.130 0.00 0.00 33.61 3.73
7498 7540 9.832445 CCTTTAAGTTTATCTAGGTTATCTGCA 57.168 33.333 0.00 0.00 0.00 4.41
7499 7541 9.833917 ACCTTTAAGTTTATCTAGGTTATCTGC 57.166 33.333 0.00 0.00 32.26 4.26
7549 7591 2.352960 GGACGATGATGCTCTGAAAACC 59.647 50.000 0.00 0.00 0.00 3.27
7560 7602 0.533755 GGCTTCCCAGGACGATGATG 60.534 60.000 0.00 0.00 0.00 3.07
7567 7609 1.179174 GGTTTGTGGCTTCCCAGGAC 61.179 60.000 0.00 0.00 43.18 3.85
7584 7626 0.477204 TATCGACCTGGAGATCCGGT 59.523 55.000 13.06 13.06 42.60 5.28
7632 7674 1.718280 AATGGGATCGGAGGGAGTAC 58.282 55.000 0.00 0.00 0.00 2.73
7637 7679 2.037772 CAGACTAAATGGGATCGGAGGG 59.962 54.545 0.00 0.00 0.00 4.30
7638 7680 2.548920 GCAGACTAAATGGGATCGGAGG 60.549 54.545 0.00 0.00 0.00 4.30
7639 7681 2.760374 GCAGACTAAATGGGATCGGAG 58.240 52.381 0.00 0.00 0.00 4.63
7640 7682 1.068588 CGCAGACTAAATGGGATCGGA 59.931 52.381 0.00 0.00 32.69 4.55
7641 7683 1.202533 ACGCAGACTAAATGGGATCGG 60.203 52.381 0.00 0.00 34.87 4.18
7642 7684 2.225068 ACGCAGACTAAATGGGATCG 57.775 50.000 0.00 0.00 34.87 3.69
7643 7685 6.456501 AGTTATACGCAGACTAAATGGGATC 58.543 40.000 0.00 0.00 34.87 3.36
7644 7686 6.420913 AGTTATACGCAGACTAAATGGGAT 57.579 37.500 0.00 0.00 34.87 3.85
7645 7687 5.864418 AGTTATACGCAGACTAAATGGGA 57.136 39.130 0.00 0.00 34.87 4.37
7646 7688 6.920569 AAAGTTATACGCAGACTAAATGGG 57.079 37.500 0.00 0.00 36.72 4.00
7647 7689 7.908601 GGAAAAAGTTATACGCAGACTAAATGG 59.091 37.037 0.00 0.00 0.00 3.16
7648 7690 7.908601 GGGAAAAAGTTATACGCAGACTAAATG 59.091 37.037 0.00 0.00 0.00 2.32
7649 7691 7.201582 CGGGAAAAAGTTATACGCAGACTAAAT 60.202 37.037 0.00 0.00 0.00 1.40
7650 7692 6.091169 CGGGAAAAAGTTATACGCAGACTAAA 59.909 38.462 0.00 0.00 0.00 1.85
7651 7693 5.577945 CGGGAAAAAGTTATACGCAGACTAA 59.422 40.000 0.00 0.00 0.00 2.24
7652 7694 5.104374 CGGGAAAAAGTTATACGCAGACTA 58.896 41.667 0.00 0.00 0.00 2.59
7653 7695 3.930848 CGGGAAAAAGTTATACGCAGACT 59.069 43.478 0.00 0.00 0.00 3.24
7654 7696 3.928375 TCGGGAAAAAGTTATACGCAGAC 59.072 43.478 0.00 0.00 0.00 3.51
7655 7697 4.191033 TCGGGAAAAAGTTATACGCAGA 57.809 40.909 0.00 0.00 0.00 4.26
7656 7698 4.932268 TTCGGGAAAAAGTTATACGCAG 57.068 40.909 0.00 0.00 0.00 5.18
7657 7699 5.686159 TTTTCGGGAAAAAGTTATACGCA 57.314 34.783 4.20 0.00 37.35 5.24
7666 7708 8.679616 ACCATTCCGGATTTTTCGGGAAAAAG 62.680 42.308 20.12 10.01 46.97 2.27
7667 7709 6.968832 ACCATTCCGGATTTTTCGGGAAAAA 61.969 40.000 18.42 18.42 46.97 1.94
7668 7710 3.056465 CCATTCCGGATTTTTCGGGAAAA 60.056 43.478 4.15 2.59 46.97 2.29
7669 7711 2.494073 CCATTCCGGATTTTTCGGGAAA 59.506 45.455 4.15 0.00 46.97 3.13
7671 7713 1.004979 ACCATTCCGGATTTTTCGGGA 59.995 47.619 4.15 0.00 46.78 5.14
7672 7714 1.404035 GACCATTCCGGATTTTTCGGG 59.596 52.381 4.15 1.19 46.78 5.14
7674 7716 2.477863 GCAGACCATTCCGGATTTTTCG 60.478 50.000 4.15 0.00 38.63 3.46
7675 7717 2.477863 CGCAGACCATTCCGGATTTTTC 60.478 50.000 4.15 0.00 38.63 2.29
7676 7718 1.472480 CGCAGACCATTCCGGATTTTT 59.528 47.619 4.15 0.00 38.63 1.94
7677 7719 1.094785 CGCAGACCATTCCGGATTTT 58.905 50.000 4.15 0.00 38.63 1.82
7678 7720 1.376609 GCGCAGACCATTCCGGATTT 61.377 55.000 4.15 0.00 38.63 2.17
7679 7721 1.819632 GCGCAGACCATTCCGGATT 60.820 57.895 4.15 0.00 38.63 3.01
7680 7722 2.203070 GCGCAGACCATTCCGGAT 60.203 61.111 4.15 0.00 38.63 4.18
7681 7723 4.812476 CGCGCAGACCATTCCGGA 62.812 66.667 8.75 0.00 38.63 5.14
7683 7725 3.083600 GAACGCGCAGACCATTCCG 62.084 63.158 5.73 0.00 0.00 4.30
7684 7726 2.785258 GAACGCGCAGACCATTCC 59.215 61.111 5.73 0.00 0.00 3.01
7685 7727 2.395690 CGAACGCGCAGACCATTC 59.604 61.111 5.73 0.00 0.00 2.67
7686 7728 3.118454 CCGAACGCGCAGACCATT 61.118 61.111 5.73 0.00 35.83 3.16
7687 7729 3.876589 AACCGAACGCGCAGACCAT 62.877 57.895 5.73 0.00 35.83 3.55
7688 7730 4.595538 AACCGAACGCGCAGACCA 62.596 61.111 5.73 0.00 35.83 4.02
7689 7731 3.774702 GAACCGAACGCGCAGACC 61.775 66.667 5.73 0.00 35.83 3.85
7690 7732 3.000080 CTGAACCGAACGCGCAGAC 62.000 63.158 5.73 0.00 35.83 3.51
7691 7733 2.733218 CTGAACCGAACGCGCAGA 60.733 61.111 5.73 0.00 35.83 4.26
7692 7734 4.430423 GCTGAACCGAACGCGCAG 62.430 66.667 5.73 4.42 35.83 5.18
7695 7737 4.072088 GTGGCTGAACCGAACGCG 62.072 66.667 3.53 3.53 43.94 6.01
7696 7738 3.723348 GGTGGCTGAACCGAACGC 61.723 66.667 0.00 0.00 43.94 4.84
7697 7739 3.047877 GGGTGGCTGAACCGAACG 61.048 66.667 0.00 0.00 43.94 3.95
7698 7740 0.893727 AATGGGTGGCTGAACCGAAC 60.894 55.000 0.00 0.00 43.94 3.95
7699 7741 0.608035 GAATGGGTGGCTGAACCGAA 60.608 55.000 0.00 0.00 43.94 4.30
7700 7742 1.002624 GAATGGGTGGCTGAACCGA 60.003 57.895 0.00 0.00 43.94 4.69
7701 7743 0.609131 AAGAATGGGTGGCTGAACCG 60.609 55.000 0.00 0.00 43.94 4.44
7702 7744 1.546029 GAAAGAATGGGTGGCTGAACC 59.454 52.381 0.00 0.00 39.71 3.62
7703 7745 1.546029 GGAAAGAATGGGTGGCTGAAC 59.454 52.381 0.00 0.00 0.00 3.18
7704 7746 1.428912 AGGAAAGAATGGGTGGCTGAA 59.571 47.619 0.00 0.00 0.00 3.02
7705 7747 1.075601 AGGAAAGAATGGGTGGCTGA 58.924 50.000 0.00 0.00 0.00 4.26
7706 7748 1.180029 CAGGAAAGAATGGGTGGCTG 58.820 55.000 0.00 0.00 0.00 4.85
7707 7749 0.040204 CCAGGAAAGAATGGGTGGCT 59.960 55.000 0.00 0.00 32.63 4.75
7708 7750 0.039618 TCCAGGAAAGAATGGGTGGC 59.960 55.000 0.00 0.00 37.19 5.01
7709 7751 2.603075 TTCCAGGAAAGAATGGGTGG 57.397 50.000 0.00 0.00 37.19 4.61
7710 7752 3.954258 GGTATTCCAGGAAAGAATGGGTG 59.046 47.826 5.81 0.00 37.19 4.61
7711 7753 3.052869 GGGTATTCCAGGAAAGAATGGGT 60.053 47.826 5.81 0.00 37.19 4.51
7712 7754 3.566351 GGGTATTCCAGGAAAGAATGGG 58.434 50.000 5.81 0.00 37.19 4.00
7713 7755 3.205282 AGGGGTATTCCAGGAAAGAATGG 59.795 47.826 5.81 0.00 35.59 3.16
7714 7756 4.464947 GAGGGGTATTCCAGGAAAGAATG 58.535 47.826 5.81 0.00 35.59 2.67
7715 7757 3.463704 GGAGGGGTATTCCAGGAAAGAAT 59.536 47.826 5.81 0.00 37.67 2.40
7716 7758 2.850568 GGAGGGGTATTCCAGGAAAGAA 59.149 50.000 5.81 0.00 37.22 2.52
7717 7759 2.047296 AGGAGGGGTATTCCAGGAAAGA 59.953 50.000 5.81 0.00 37.18 2.52
7718 7760 2.439880 GAGGAGGGGTATTCCAGGAAAG 59.560 54.545 5.81 0.00 37.18 2.62
7719 7761 2.488836 GAGGAGGGGTATTCCAGGAAA 58.511 52.381 5.81 0.00 37.18 3.13
7720 7762 1.345112 GGAGGAGGGGTATTCCAGGAA 60.345 57.143 3.72 3.72 37.18 3.36
7721 7763 0.267960 GGAGGAGGGGTATTCCAGGA 59.732 60.000 0.00 0.00 37.18 3.86
7722 7764 0.269173 AGGAGGAGGGGTATTCCAGG 59.731 60.000 0.00 0.00 37.18 4.45
7723 7765 2.050918 GAAGGAGGAGGGGTATTCCAG 58.949 57.143 0.00 0.00 37.18 3.86
7724 7766 1.691482 CGAAGGAGGAGGGGTATTCCA 60.691 57.143 0.00 0.00 37.18 3.53
7725 7767 1.049402 CGAAGGAGGAGGGGTATTCC 58.951 60.000 0.00 0.00 34.83 3.01
7726 7768 0.393448 GCGAAGGAGGAGGGGTATTC 59.607 60.000 0.00 0.00 0.00 1.75
7727 7769 0.031010 AGCGAAGGAGGAGGGGTATT 60.031 55.000 0.00 0.00 0.00 1.89
7728 7770 0.031010 AAGCGAAGGAGGAGGGGTAT 60.031 55.000 0.00 0.00 0.00 2.73
7729 7771 0.686769 GAAGCGAAGGAGGAGGGGTA 60.687 60.000 0.00 0.00 0.00 3.69
7730 7772 1.990614 GAAGCGAAGGAGGAGGGGT 60.991 63.158 0.00 0.00 0.00 4.95
7731 7773 2.904131 GAAGCGAAGGAGGAGGGG 59.096 66.667 0.00 0.00 0.00 4.79
7732 7774 2.496817 CGAAGCGAAGGAGGAGGG 59.503 66.667 0.00 0.00 0.00 4.30
7745 7787 1.226831 GCGAGAGAAGGAGGCGAAG 60.227 63.158 0.00 0.00 0.00 3.79
7746 7788 1.323271 ATGCGAGAGAAGGAGGCGAA 61.323 55.000 0.00 0.00 0.00 4.70
7747 7789 1.323271 AATGCGAGAGAAGGAGGCGA 61.323 55.000 0.00 0.00 0.00 5.54
7748 7790 0.385751 TAATGCGAGAGAAGGAGGCG 59.614 55.000 0.00 0.00 0.00 5.52
7749 7791 2.604046 TTAATGCGAGAGAAGGAGGC 57.396 50.000 0.00 0.00 0.00 4.70
7750 7792 5.178438 GCTTAATTAATGCGAGAGAAGGAGG 59.822 44.000 0.00 0.00 0.00 4.30
7751 7793 5.178438 GGCTTAATTAATGCGAGAGAAGGAG 59.822 44.000 0.00 0.00 0.00 3.69
7752 7794 5.057149 GGCTTAATTAATGCGAGAGAAGGA 58.943 41.667 0.00 0.00 0.00 3.36
7753 7795 4.816385 TGGCTTAATTAATGCGAGAGAAGG 59.184 41.667 0.00 0.00 0.00 3.46
7754 7796 5.559799 GCTGGCTTAATTAATGCGAGAGAAG 60.560 44.000 22.99 4.99 35.12 2.85
7755 7797 4.273480 GCTGGCTTAATTAATGCGAGAGAA 59.727 41.667 22.99 0.00 35.12 2.87
7756 7798 3.809832 GCTGGCTTAATTAATGCGAGAGA 59.190 43.478 22.99 5.56 35.12 3.10
7757 7799 3.812053 AGCTGGCTTAATTAATGCGAGAG 59.188 43.478 22.99 14.87 35.12 3.20
7758 7800 3.808728 AGCTGGCTTAATTAATGCGAGA 58.191 40.909 22.99 8.69 35.12 4.04
7759 7801 4.377841 GCTAGCTGGCTTAATTAATGCGAG 60.378 45.833 15.78 18.42 36.01 5.03
7760 7802 3.498397 GCTAGCTGGCTTAATTAATGCGA 59.502 43.478 15.78 2.04 0.00 5.10
7761 7803 3.499918 AGCTAGCTGGCTTAATTAATGCG 59.500 43.478 20.22 0.00 39.86 4.73
7762 7804 4.377841 CGAGCTAGCTGGCTTAATTAATGC 60.378 45.833 26.52 8.70 43.20 3.56
7763 7805 4.377841 GCGAGCTAGCTGGCTTAATTAATG 60.378 45.833 35.87 9.51 43.06 1.90
7764 7806 3.748568 GCGAGCTAGCTGGCTTAATTAAT 59.251 43.478 35.87 0.16 43.06 1.40
7765 7807 3.131396 GCGAGCTAGCTGGCTTAATTAA 58.869 45.455 35.87 0.00 43.06 1.40
7766 7808 2.548067 GGCGAGCTAGCTGGCTTAATTA 60.548 50.000 39.12 0.00 45.18 1.40
7767 7809 1.587547 GCGAGCTAGCTGGCTTAATT 58.412 50.000 35.87 2.74 43.06 1.40
7768 7810 0.250081 GGCGAGCTAGCTGGCTTAAT 60.250 55.000 39.12 10.01 45.18 1.40
7769 7811 1.144057 GGCGAGCTAGCTGGCTTAA 59.856 57.895 39.12 0.00 45.18 1.85
7770 7812 1.739338 GAGGCGAGCTAGCTGGCTTA 61.739 60.000 39.12 0.00 45.18 3.09
7771 7813 3.080121 AGGCGAGCTAGCTGGCTT 61.080 61.111 39.12 33.55 45.18 4.35
7772 7814 3.535962 GAGGCGAGCTAGCTGGCT 61.536 66.667 39.12 34.15 45.18 4.75
7773 7815 4.600576 GGAGGCGAGCTAGCTGGC 62.601 72.222 35.65 35.65 45.13 4.85
7774 7816 1.965754 AAAGGAGGCGAGCTAGCTGG 61.966 60.000 24.99 22.92 37.29 4.85
7775 7817 0.107945 AAAAGGAGGCGAGCTAGCTG 60.108 55.000 24.99 15.40 37.29 4.24
7776 7818 0.615850 AAAAAGGAGGCGAGCTAGCT 59.384 50.000 19.45 19.45 37.29 3.32
7777 7819 1.010580 GAAAAAGGAGGCGAGCTAGC 58.989 55.000 10.75 10.75 0.00 3.42
7778 7820 2.682155 AGAAAAAGGAGGCGAGCTAG 57.318 50.000 0.00 0.00 0.00 3.42
7779 7821 2.354805 GGAAGAAAAAGGAGGCGAGCTA 60.355 50.000 0.00 0.00 0.00 3.32
7780 7822 1.611936 GGAAGAAAAAGGAGGCGAGCT 60.612 52.381 0.00 0.00 0.00 4.09
7781 7823 0.805614 GGAAGAAAAAGGAGGCGAGC 59.194 55.000 0.00 0.00 0.00 5.03
7782 7824 2.351455 GAGGAAGAAAAAGGAGGCGAG 58.649 52.381 0.00 0.00 0.00 5.03
7783 7825 1.337823 CGAGGAAGAAAAAGGAGGCGA 60.338 52.381 0.00 0.00 0.00 5.54
7784 7826 1.079503 CGAGGAAGAAAAAGGAGGCG 58.920 55.000 0.00 0.00 0.00 5.52
7785 7827 2.186532 ACGAGGAAGAAAAAGGAGGC 57.813 50.000 0.00 0.00 0.00 4.70
7786 7828 4.246458 CTGTACGAGGAAGAAAAAGGAGG 58.754 47.826 0.00 0.00 0.00 4.30
7787 7829 4.884247 ACTGTACGAGGAAGAAAAAGGAG 58.116 43.478 0.00 0.00 0.00 3.69
7788 7830 4.950205 ACTGTACGAGGAAGAAAAAGGA 57.050 40.909 0.00 0.00 0.00 3.36
7803 7845 2.442188 GCGTGCTGGCGTACTGTAC 61.442 63.158 7.90 7.90 0.00 2.90
7804 7846 2.126228 GCGTGCTGGCGTACTGTA 60.126 61.111 0.00 0.00 0.00 2.74
7805 7847 3.589654 ATGCGTGCTGGCGTACTGT 62.590 57.895 0.00 0.00 35.06 3.55
7806 7848 2.815211 ATGCGTGCTGGCGTACTG 60.815 61.111 0.00 0.00 35.06 2.74
7807 7849 2.815211 CATGCGTGCTGGCGTACT 60.815 61.111 0.00 0.00 35.06 2.73
7819 7861 1.810606 ATAGGAGGAGGACGCATGCG 61.811 60.000 36.79 36.79 46.03 4.73
7820 7862 0.037790 GATAGGAGGAGGACGCATGC 60.038 60.000 7.91 7.91 0.00 4.06
7821 7863 1.626686 AGATAGGAGGAGGACGCATG 58.373 55.000 0.00 0.00 0.00 4.06
7822 7864 2.377193 AGTAGATAGGAGGAGGACGCAT 59.623 50.000 0.00 0.00 0.00 4.73
7823 7865 1.775459 AGTAGATAGGAGGAGGACGCA 59.225 52.381 0.00 0.00 0.00 5.24
7824 7866 2.429478 GAGTAGATAGGAGGAGGACGC 58.571 57.143 0.00 0.00 0.00 5.19
7825 7867 2.690786 CGAGTAGATAGGAGGAGGACG 58.309 57.143 0.00 0.00 0.00 4.79
7826 7868 2.429478 GCGAGTAGATAGGAGGAGGAC 58.571 57.143 0.00 0.00 0.00 3.85
7827 7869 1.351683 GGCGAGTAGATAGGAGGAGGA 59.648 57.143 0.00 0.00 0.00 3.71
7828 7870 1.353022 AGGCGAGTAGATAGGAGGAGG 59.647 57.143 0.00 0.00 0.00 4.30
7829 7871 2.871096 AGGCGAGTAGATAGGAGGAG 57.129 55.000 0.00 0.00 0.00 3.69
7830 7872 2.712087 AGAAGGCGAGTAGATAGGAGGA 59.288 50.000 0.00 0.00 0.00 3.71
7831 7873 3.149005 AGAAGGCGAGTAGATAGGAGG 57.851 52.381 0.00 0.00 0.00 4.30
7832 7874 4.901868 AGTAGAAGGCGAGTAGATAGGAG 58.098 47.826 0.00 0.00 0.00 3.69
7833 7875 4.262981 GGAGTAGAAGGCGAGTAGATAGGA 60.263 50.000 0.00 0.00 0.00 2.94
7834 7876 4.004982 GGAGTAGAAGGCGAGTAGATAGG 58.995 52.174 0.00 0.00 0.00 2.57
7835 7877 4.643463 TGGAGTAGAAGGCGAGTAGATAG 58.357 47.826 0.00 0.00 0.00 2.08
7836 7878 4.701651 TGGAGTAGAAGGCGAGTAGATA 57.298 45.455 0.00 0.00 0.00 1.98
7837 7879 3.579534 TGGAGTAGAAGGCGAGTAGAT 57.420 47.619 0.00 0.00 0.00 1.98
7838 7880 3.136809 AGATGGAGTAGAAGGCGAGTAGA 59.863 47.826 0.00 0.00 0.00 2.59
7839 7881 3.482436 AGATGGAGTAGAAGGCGAGTAG 58.518 50.000 0.00 0.00 0.00 2.57
7840 7882 3.579534 AGATGGAGTAGAAGGCGAGTA 57.420 47.619 0.00 0.00 0.00 2.59
7841 7883 2.445682 AGATGGAGTAGAAGGCGAGT 57.554 50.000 0.00 0.00 0.00 4.18
7842 7884 2.955660 AGAAGATGGAGTAGAAGGCGAG 59.044 50.000 0.00 0.00 0.00 5.03
7843 7885 3.019799 AGAAGATGGAGTAGAAGGCGA 57.980 47.619 0.00 0.00 0.00 5.54
7844 7886 3.383185 AGAAGAAGATGGAGTAGAAGGCG 59.617 47.826 0.00 0.00 0.00 5.52
7845 7887 4.202212 GGAGAAGAAGATGGAGTAGAAGGC 60.202 50.000 0.00 0.00 0.00 4.35
7846 7888 5.208121 AGGAGAAGAAGATGGAGTAGAAGG 58.792 45.833 0.00 0.00 0.00 3.46
7847 7889 5.301805 GGAGGAGAAGAAGATGGAGTAGAAG 59.698 48.000 0.00 0.00 0.00 2.85
7848 7890 5.205056 GGAGGAGAAGAAGATGGAGTAGAA 58.795 45.833 0.00 0.00 0.00 2.10
7849 7891 4.386986 GGGAGGAGAAGAAGATGGAGTAGA 60.387 50.000 0.00 0.00 0.00 2.59
7850 7892 3.895041 GGGAGGAGAAGAAGATGGAGTAG 59.105 52.174 0.00 0.00 0.00 2.57
7851 7893 3.533907 AGGGAGGAGAAGAAGATGGAGTA 59.466 47.826 0.00 0.00 0.00 2.59
7852 7894 2.317594 AGGGAGGAGAAGAAGATGGAGT 59.682 50.000 0.00 0.00 0.00 3.85
7853 7895 2.965147 GAGGGAGGAGAAGAAGATGGAG 59.035 54.545 0.00 0.00 0.00 3.86
7854 7896 2.589664 AGAGGGAGGAGAAGAAGATGGA 59.410 50.000 0.00 0.00 0.00 3.41
7855 7897 2.965147 GAGAGGGAGGAGAAGAAGATGG 59.035 54.545 0.00 0.00 0.00 3.51
7856 7898 3.641046 TGAGAGGGAGGAGAAGAAGATG 58.359 50.000 0.00 0.00 0.00 2.90
7857 7899 4.289245 CTTGAGAGGGAGGAGAAGAAGAT 58.711 47.826 0.00 0.00 0.00 2.40
7858 7900 3.707316 CTTGAGAGGGAGGAGAAGAAGA 58.293 50.000 0.00 0.00 0.00 2.87
7859 7901 2.168313 GCTTGAGAGGGAGGAGAAGAAG 59.832 54.545 0.00 0.00 0.00 2.85
7860 7902 2.183679 GCTTGAGAGGGAGGAGAAGAA 58.816 52.381 0.00 0.00 0.00 2.52
7861 7903 1.360852 AGCTTGAGAGGGAGGAGAAGA 59.639 52.381 0.00 0.00 0.00 2.87
7862 7904 1.756538 GAGCTTGAGAGGGAGGAGAAG 59.243 57.143 0.00 0.00 0.00 2.85
7863 7905 1.077828 TGAGCTTGAGAGGGAGGAGAA 59.922 52.381 0.00 0.00 0.00 2.87
7864 7906 0.707024 TGAGCTTGAGAGGGAGGAGA 59.293 55.000 0.00 0.00 0.00 3.71
7865 7907 1.206849 GTTGAGCTTGAGAGGGAGGAG 59.793 57.143 0.00 0.00 0.00 3.69
7866 7908 1.270907 GTTGAGCTTGAGAGGGAGGA 58.729 55.000 0.00 0.00 0.00 3.71
7867 7909 0.251634 GGTTGAGCTTGAGAGGGAGG 59.748 60.000 0.00 0.00 0.00 4.30
7868 7910 1.206849 GAGGTTGAGCTTGAGAGGGAG 59.793 57.143 0.00 0.00 0.00 4.30
7869 7911 1.270907 GAGGTTGAGCTTGAGAGGGA 58.729 55.000 0.00 0.00 0.00 4.20
7870 7912 0.979665 TGAGGTTGAGCTTGAGAGGG 59.020 55.000 0.00 0.00 0.00 4.30
7871 7913 2.630158 CATGAGGTTGAGCTTGAGAGG 58.370 52.381 0.00 0.00 0.00 3.69
7872 7914 2.235650 TCCATGAGGTTGAGCTTGAGAG 59.764 50.000 0.00 0.00 35.89 3.20
7873 7915 2.235650 CTCCATGAGGTTGAGCTTGAGA 59.764 50.000 0.00 0.00 35.89 3.27
7874 7916 2.027377 ACTCCATGAGGTTGAGCTTGAG 60.027 50.000 0.00 0.00 33.35 3.02
7875 7917 1.980765 ACTCCATGAGGTTGAGCTTGA 59.019 47.619 0.00 0.00 33.35 3.02
7876 7918 2.027377 AGACTCCATGAGGTTGAGCTTG 60.027 50.000 0.00 0.00 33.35 4.01
7877 7919 2.264455 AGACTCCATGAGGTTGAGCTT 58.736 47.619 0.00 0.00 33.35 3.74
7878 7920 1.949799 AGACTCCATGAGGTTGAGCT 58.050 50.000 0.00 0.00 33.35 4.09
7879 7921 2.482839 GCTAGACTCCATGAGGTTGAGC 60.483 54.545 0.00 2.38 33.35 4.26
7880 7922 3.030291 AGCTAGACTCCATGAGGTTGAG 58.970 50.000 0.00 0.00 33.35 3.02
7881 7923 3.107402 AGCTAGACTCCATGAGGTTGA 57.893 47.619 0.00 0.00 33.35 3.18
7882 7924 3.957497 AGTAGCTAGACTCCATGAGGTTG 59.043 47.826 0.00 0.00 33.35 3.77
7883 7925 4.258457 AGTAGCTAGACTCCATGAGGTT 57.742 45.455 0.00 0.00 33.35 3.50
7884 7926 3.957497 CAAGTAGCTAGACTCCATGAGGT 59.043 47.826 0.00 0.00 33.35 3.85
7885 7927 3.957497 ACAAGTAGCTAGACTCCATGAGG 59.043 47.826 0.00 0.00 33.35 3.86
7886 7928 4.202101 CCACAAGTAGCTAGACTCCATGAG 60.202 50.000 0.00 0.00 35.52 2.90
7887 7929 3.701542 CCACAAGTAGCTAGACTCCATGA 59.298 47.826 0.00 0.00 0.00 3.07
7888 7930 3.181471 CCCACAAGTAGCTAGACTCCATG 60.181 52.174 0.00 0.00 0.00 3.66
7889 7931 3.034635 CCCACAAGTAGCTAGACTCCAT 58.965 50.000 0.00 0.00 0.00 3.41
7890 7932 2.042569 TCCCACAAGTAGCTAGACTCCA 59.957 50.000 0.00 0.00 0.00 3.86
7891 7933 2.736347 TCCCACAAGTAGCTAGACTCC 58.264 52.381 0.00 0.00 0.00 3.85
7892 7934 4.017808 TCTTCCCACAAGTAGCTAGACTC 58.982 47.826 0.00 0.00 0.00 3.36
7893 7935 3.764972 GTCTTCCCACAAGTAGCTAGACT 59.235 47.826 0.00 0.00 0.00 3.24
7894 7936 3.510360 TGTCTTCCCACAAGTAGCTAGAC 59.490 47.826 0.00 0.00 33.25 2.59
7895 7937 3.764434 CTGTCTTCCCACAAGTAGCTAGA 59.236 47.826 0.00 0.00 0.00 2.43
7896 7938 3.677424 GCTGTCTTCCCACAAGTAGCTAG 60.677 52.174 0.00 0.00 0.00 3.42
7897 7939 2.233922 GCTGTCTTCCCACAAGTAGCTA 59.766 50.000 0.00 0.00 0.00 3.32
7898 7940 1.002544 GCTGTCTTCCCACAAGTAGCT 59.997 52.381 0.00 0.00 0.00 3.32
7899 7941 1.443802 GCTGTCTTCCCACAAGTAGC 58.556 55.000 0.00 0.00 0.00 3.58
7900 7942 1.347707 TGGCTGTCTTCCCACAAGTAG 59.652 52.381 0.00 0.00 0.00 2.57
7901 7943 1.347707 CTGGCTGTCTTCCCACAAGTA 59.652 52.381 0.00 0.00 0.00 2.24
7902 7944 0.109342 CTGGCTGTCTTCCCACAAGT 59.891 55.000 0.00 0.00 0.00 3.16
7903 7945 1.239968 GCTGGCTGTCTTCCCACAAG 61.240 60.000 0.00 0.00 0.00 3.16
7904 7946 1.228245 GCTGGCTGTCTTCCCACAA 60.228 57.895 0.00 0.00 0.00 3.33
7905 7947 2.431683 GCTGGCTGTCTTCCCACA 59.568 61.111 0.00 0.00 0.00 4.17
7906 7948 2.360475 GGCTGGCTGTCTTCCCAC 60.360 66.667 0.00 0.00 0.00 4.61
7907 7949 2.530151 AGGCTGGCTGTCTTCCCA 60.530 61.111 1.67 0.00 0.00 4.37
7908 7950 1.553690 TACAGGCTGGCTGTCTTCCC 61.554 60.000 35.79 0.00 36.37 3.97
7909 7951 0.107945 CTACAGGCTGGCTGTCTTCC 60.108 60.000 35.79 0.00 36.37 3.46
7910 7952 0.898320 TCTACAGGCTGGCTGTCTTC 59.102 55.000 35.79 0.00 36.37 2.87
7911 7953 1.277557 CTTCTACAGGCTGGCTGTCTT 59.722 52.381 35.79 17.66 36.37 3.01
7912 7954 0.901124 CTTCTACAGGCTGGCTGTCT 59.099 55.000 35.79 18.36 36.37 3.41
7913 7955 0.898320 TCTTCTACAGGCTGGCTGTC 59.102 55.000 35.79 0.00 36.37 3.51
7914 7956 0.610687 GTCTTCTACAGGCTGGCTGT 59.389 55.000 34.44 34.44 38.69 4.40
7915 7957 0.610174 TGTCTTCTACAGGCTGGCTG 59.390 55.000 27.32 27.32 33.01 4.85
7916 7958 3.073228 TGTCTTCTACAGGCTGGCT 57.927 52.632 20.34 0.00 33.01 4.75
7924 7966 0.448197 CGAGCTCGCTGTCTTCTACA 59.552 55.000 25.07 0.00 36.42 2.74
7925 7967 0.448593 ACGAGCTCGCTGTCTTCTAC 59.551 55.000 34.83 0.00 44.43 2.59
7926 7968 0.448197 CACGAGCTCGCTGTCTTCTA 59.552 55.000 34.83 0.00 44.43 2.10
7927 7969 1.211449 CACGAGCTCGCTGTCTTCT 59.789 57.895 34.83 11.05 44.43 2.85
7928 7970 2.440569 GCACGAGCTCGCTGTCTTC 61.441 63.158 34.83 14.93 44.43 2.87
7929 7971 2.431601 GCACGAGCTCGCTGTCTT 60.432 61.111 34.83 12.67 44.43 3.01
7946 7988 0.462581 TCCGCAAGCAGGCTATCAAG 60.463 55.000 0.00 0.00 0.00 3.02
7947 7989 0.462581 CTCCGCAAGCAGGCTATCAA 60.463 55.000 0.00 0.00 0.00 2.57
7948 7990 1.144716 CTCCGCAAGCAGGCTATCA 59.855 57.895 0.00 0.00 0.00 2.15
7949 7991 1.596477 CCTCCGCAAGCAGGCTATC 60.596 63.158 0.00 0.00 0.00 2.08
7950 7992 2.066393 TCCTCCGCAAGCAGGCTAT 61.066 57.895 0.00 0.00 0.00 2.97
7951 7993 2.683572 TCCTCCGCAAGCAGGCTA 60.684 61.111 0.00 0.00 0.00 3.93
7952 7994 4.400961 GTCCTCCGCAAGCAGGCT 62.401 66.667 0.00 0.00 0.00 4.58
7953 7995 4.704833 TGTCCTCCGCAAGCAGGC 62.705 66.667 0.00 0.00 0.00 4.85
7954 7996 2.435586 CTGTCCTCCGCAAGCAGG 60.436 66.667 0.00 0.00 0.00 4.85
7955 7997 3.123620 GCTGTCCTCCGCAAGCAG 61.124 66.667 0.00 0.00 0.00 4.24
7956 7998 3.258228 ATGCTGTCCTCCGCAAGCA 62.258 57.895 0.00 0.00 39.89 3.91
7957 7999 2.437359 ATGCTGTCCTCCGCAAGC 60.437 61.111 0.00 0.00 39.89 4.01
7958 8000 2.758089 GCATGCTGTCCTCCGCAAG 61.758 63.158 11.37 0.00 39.89 4.01
7959 8001 2.747460 GCATGCTGTCCTCCGCAA 60.747 61.111 11.37 0.00 39.89 4.85
7960 8002 3.670637 GAGCATGCTGTCCTCCGCA 62.671 63.158 28.27 0.00 40.87 5.69
7961 8003 2.894387 GAGCATGCTGTCCTCCGC 60.894 66.667 28.27 3.62 0.00 5.54
7962 8004 2.584418 CGAGCATGCTGTCCTCCG 60.584 66.667 28.27 17.46 0.00 4.63
7963 8005 2.894387 GCGAGCATGCTGTCCTCC 60.894 66.667 28.27 8.49 0.00 4.30
7964 8006 2.186384 AGCGAGCATGCTGTCCTC 59.814 61.111 28.27 9.59 45.28 3.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.