Multiple sequence alignment - TraesCS4A01G116500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G116500 chr4A 100.000 2194 0 0 1 2194 141130096 141127903 0.000000e+00 4052
1 TraesCS4A01G116500 chr4A 96.910 1586 44 4 610 2194 309375145 309376726 0.000000e+00 2652
2 TraesCS4A01G116500 chr4A 100.000 212 0 0 2269 2480 141127828 141127617 2.310000e-105 392
3 TraesCS4A01G116500 chr5D 98.108 1586 28 2 610 2194 503330157 503328573 0.000000e+00 2761
4 TraesCS4A01G116500 chr5D 97.984 1587 29 3 610 2194 6236653 6238238 0.000000e+00 2750
5 TraesCS4A01G116500 chr5D 100.000 212 0 0 2269 2480 365229481 365229270 2.310000e-105 392
6 TraesCS4A01G116500 chr5D 99.528 212 1 0 2269 2480 6238123 6238334 1.080000e-103 387
7 TraesCS4A01G116500 chr5D 99.528 212 1 0 2269 2480 432306959 432307170 1.080000e-103 387
8 TraesCS4A01G116500 chr5D 96.341 164 6 0 454 617 503330348 503330185 1.130000e-68 270
9 TraesCS4A01G116500 chr1D 97.415 1586 38 3 610 2194 254476244 254474661 0.000000e+00 2699
10 TraesCS4A01G116500 chr1D 97.070 1570 44 2 610 2179 180357148 180358715 0.000000e+00 2643
11 TraesCS4A01G116500 chr1D 96.280 1586 52 5 610 2194 244767733 244766154 0.000000e+00 2595
12 TraesCS4A01G116500 chr1D 95.586 1586 66 2 610 2194 244200540 244198958 0.000000e+00 2538
13 TraesCS4A01G116500 chr1D 96.341 164 6 0 454 617 254476435 254476272 1.130000e-68 270
14 TraesCS4A01G116500 chr1D 95.122 164 8 0 454 617 290506605 290506442 2.450000e-65 259
15 TraesCS4A01G116500 chr2A 96.778 1552 43 5 610 2159 419795460 419793914 0.000000e+00 2582
16 TraesCS4A01G116500 chr2A 92.434 304 23 0 144 447 729555245 729554942 3.790000e-118 435
17 TraesCS4A01G116500 chr2A 92.105 304 22 2 144 447 459017004 459017305 6.340000e-116 427
18 TraesCS4A01G116500 chr2A 91.176 306 26 1 143 447 743327794 743327489 4.930000e-112 414
19 TraesCS4A01G116500 chr1A 98.124 1226 20 3 610 1835 554448699 554449921 0.000000e+00 2134
20 TraesCS4A01G116500 chr1A 100.000 212 0 0 2269 2480 554450041 554450252 2.310000e-105 392
21 TraesCS4A01G116500 chr1A 96.341 164 6 0 454 617 554448508 554448671 1.130000e-68 270
22 TraesCS4A01G116500 chr1B 94.488 508 26 2 1687 2194 218012621 218012116 0.000000e+00 782
23 TraesCS4A01G116500 chr1B 90.879 307 28 0 143 449 537041593 537041287 1.770000e-111 412
24 TraesCS4A01G116500 chr1B 97.222 144 4 0 1 144 135962558 135962415 6.850000e-61 244
25 TraesCS4A01G116500 chr5B 91.830 306 24 1 142 447 229081975 229081671 2.280000e-115 425
26 TraesCS4A01G116500 chr4D 91.722 302 25 0 144 445 226384948 226385249 1.060000e-113 420
27 TraesCS4A01G116500 chr4D 97.917 144 3 0 1 144 328999137 328999280 1.470000e-62 250
28 TraesCS4A01G116500 chr6B 91.262 309 23 4 142 447 675396239 675395932 3.810000e-113 418
29 TraesCS4A01G116500 chr2B 91.503 306 23 3 144 447 131178489 131178185 3.810000e-113 418
30 TraesCS4A01G116500 chr3D 90.282 319 29 2 143 460 488120896 488121213 1.370000e-112 416
31 TraesCS4A01G116500 chrUn 100.000 212 0 0 2269 2480 429254374 429254585 2.310000e-105 392
32 TraesCS4A01G116500 chrUn 100.000 212 0 0 2269 2480 432962716 432962927 2.310000e-105 392
33 TraesCS4A01G116500 chrUn 99.528 212 1 0 2269 2480 406224638 406224849 1.080000e-103 387
34 TraesCS4A01G116500 chrUn 96.951 164 5 0 454 617 432823287 432823124 2.430000e-70 276
35 TraesCS4A01G116500 chr7B 100.000 212 0 0 2269 2480 662739641 662739852 2.310000e-105 392
36 TraesCS4A01G116500 chr2D 99.528 212 1 0 2269 2480 33931810 33932021 1.080000e-103 387
37 TraesCS4A01G116500 chr2D 96.951 164 5 0 454 617 33930270 33930433 2.430000e-70 276
38 TraesCS4A01G116500 chr2D 96.341 164 6 0 454 617 648663866 648664029 1.130000e-68 270
39 TraesCS4A01G116500 chr2D 97.917 144 3 0 1 144 407225577 407225434 1.470000e-62 250
40 TraesCS4A01G116500 chr3B 96.951 164 5 0 454 617 201492440 201492277 2.430000e-70 276
41 TraesCS4A01G116500 chr7D 96.341 164 5 1 454 617 231565732 231565570 4.070000e-68 268
42 TraesCS4A01G116500 chr6D 94.928 138 6 1 490 626 145356408 145356271 5.370000e-52 215
43 TraesCS4A01G116500 chr4B 90.400 125 8 1 1 125 408951685 408951805 7.100000e-36 161


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G116500 chr4A 141127617 141130096 2479 True 2222.0 4052 100.0000 1 2480 2 chr4A.!!$R1 2479
1 TraesCS4A01G116500 chr4A 309375145 309376726 1581 False 2652.0 2652 96.9100 610 2194 1 chr4A.!!$F1 1584
2 TraesCS4A01G116500 chr5D 6236653 6238334 1681 False 1568.5 2750 98.7560 610 2480 2 chr5D.!!$F2 1870
3 TraesCS4A01G116500 chr5D 503328573 503330348 1775 True 1515.5 2761 97.2245 454 2194 2 chr5D.!!$R2 1740
4 TraesCS4A01G116500 chr1D 180357148 180358715 1567 False 2643.0 2643 97.0700 610 2179 1 chr1D.!!$F1 1569
5 TraesCS4A01G116500 chr1D 244766154 244767733 1579 True 2595.0 2595 96.2800 610 2194 1 chr1D.!!$R2 1584
6 TraesCS4A01G116500 chr1D 244198958 244200540 1582 True 2538.0 2538 95.5860 610 2194 1 chr1D.!!$R1 1584
7 TraesCS4A01G116500 chr1D 254474661 254476435 1774 True 1484.5 2699 96.8780 454 2194 2 chr1D.!!$R4 1740
8 TraesCS4A01G116500 chr2A 419793914 419795460 1546 True 2582.0 2582 96.7780 610 2159 1 chr2A.!!$R1 1549
9 TraesCS4A01G116500 chr1A 554448508 554450252 1744 False 932.0 2134 98.1550 454 2480 3 chr1A.!!$F1 2026
10 TraesCS4A01G116500 chr1B 218012116 218012621 505 True 782.0 782 94.4880 1687 2194 1 chr1B.!!$R2 507
11 TraesCS4A01G116500 chr2D 33930270 33932021 1751 False 331.5 387 98.2395 454 2480 2 chr2D.!!$F2 2026

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
272 273 0.035152 AGCCGGCATGTCATCTTGAA 60.035 50.0 31.54 0.0 0.0 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1740 1782 1.463056 TGTGCTAAGTAATGTGCGTGC 59.537 47.619 0.0 0.0 0.0 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.045223 TCAATGTAGAATGTAGAATGTATGTGC 57.955 33.333 0.00 0.00 0.00 4.57
28 29 7.643528 ATGTAGAATGTAGAATGTATGTGCG 57.356 36.000 0.00 0.00 0.00 5.34
29 30 6.569780 TGTAGAATGTAGAATGTATGTGCGT 58.430 36.000 0.00 0.00 0.00 5.24
30 31 5.973651 AGAATGTAGAATGTATGTGCGTG 57.026 39.130 0.00 0.00 0.00 5.34
31 32 5.419542 AGAATGTAGAATGTATGTGCGTGT 58.580 37.500 0.00 0.00 0.00 4.49
32 33 6.569780 AGAATGTAGAATGTATGTGCGTGTA 58.430 36.000 0.00 0.00 0.00 2.90
33 34 6.475727 AGAATGTAGAATGTATGTGCGTGTAC 59.524 38.462 0.00 0.00 0.00 2.90
34 35 5.061920 TGTAGAATGTATGTGCGTGTACA 57.938 39.130 0.00 0.00 35.49 2.90
35 36 4.860352 TGTAGAATGTATGTGCGTGTACAC 59.140 41.667 16.32 16.32 41.10 2.90
36 37 4.188247 AGAATGTATGTGCGTGTACACT 57.812 40.909 23.01 7.16 41.30 3.55
37 38 3.926527 AGAATGTATGTGCGTGTACACTG 59.073 43.478 23.01 16.86 41.30 3.66
38 39 1.424403 TGTATGTGCGTGTACACTGC 58.576 50.000 25.69 25.69 41.30 4.40
39 40 1.000394 TGTATGTGCGTGTACACTGCT 60.000 47.619 29.35 18.86 41.30 4.24
40 41 1.654105 GTATGTGCGTGTACACTGCTC 59.346 52.381 29.35 26.90 41.30 4.26
41 42 0.318441 ATGTGCGTGTACACTGCTCT 59.682 50.000 29.35 18.59 41.30 4.09
42 43 0.104120 TGTGCGTGTACACTGCTCTT 59.896 50.000 29.35 0.00 41.30 2.85
43 44 1.217882 GTGCGTGTACACTGCTCTTT 58.782 50.000 29.35 0.00 37.58 2.52
44 45 1.192534 GTGCGTGTACACTGCTCTTTC 59.807 52.381 29.35 17.27 37.58 2.62
45 46 0.435008 GCGTGTACACTGCTCTTTCG 59.565 55.000 25.37 12.22 0.00 3.46
46 47 1.060713 CGTGTACACTGCTCTTTCGG 58.939 55.000 23.01 0.34 0.00 4.30
47 48 1.335597 CGTGTACACTGCTCTTTCGGA 60.336 52.381 23.01 0.00 0.00 4.55
48 49 2.059541 GTGTACACTGCTCTTTCGGAC 58.940 52.381 18.92 0.00 0.00 4.79
49 50 1.684450 TGTACACTGCTCTTTCGGACA 59.316 47.619 0.00 0.00 0.00 4.02
50 51 2.059541 GTACACTGCTCTTTCGGACAC 58.940 52.381 0.00 0.00 0.00 3.67
51 52 0.249911 ACACTGCTCTTTCGGACACC 60.250 55.000 0.00 0.00 0.00 4.16
52 53 0.951040 CACTGCTCTTTCGGACACCC 60.951 60.000 0.00 0.00 0.00 4.61
53 54 1.371183 CTGCTCTTTCGGACACCCA 59.629 57.895 0.00 0.00 0.00 4.51
54 55 0.036010 CTGCTCTTTCGGACACCCAT 60.036 55.000 0.00 0.00 0.00 4.00
55 56 0.321564 TGCTCTTTCGGACACCCATG 60.322 55.000 0.00 0.00 0.00 3.66
56 57 1.648467 GCTCTTTCGGACACCCATGC 61.648 60.000 0.00 0.00 0.00 4.06
57 58 0.036010 CTCTTTCGGACACCCATGCT 60.036 55.000 0.00 0.00 0.00 3.79
58 59 0.036388 TCTTTCGGACACCCATGCTC 60.036 55.000 0.00 0.00 0.00 4.26
59 60 0.321564 CTTTCGGACACCCATGCTCA 60.322 55.000 0.00 0.00 0.00 4.26
60 61 0.605319 TTTCGGACACCCATGCTCAC 60.605 55.000 0.00 0.00 0.00 3.51
61 62 1.763546 TTCGGACACCCATGCTCACA 61.764 55.000 0.00 0.00 0.00 3.58
62 63 1.302431 CGGACACCCATGCTCACAA 60.302 57.895 0.00 0.00 0.00 3.33
63 64 0.677731 CGGACACCCATGCTCACAAT 60.678 55.000 0.00 0.00 0.00 2.71
64 65 1.549203 GGACACCCATGCTCACAATT 58.451 50.000 0.00 0.00 0.00 2.32
65 66 1.203052 GGACACCCATGCTCACAATTG 59.797 52.381 3.24 3.24 0.00 2.32
66 67 1.203052 GACACCCATGCTCACAATTGG 59.797 52.381 10.83 0.00 0.00 3.16
67 68 1.203038 ACACCCATGCTCACAATTGGA 60.203 47.619 10.83 3.55 28.74 3.53
68 69 1.203052 CACCCATGCTCACAATTGGAC 59.797 52.381 10.83 0.00 28.74 4.02
69 70 1.203038 ACCCATGCTCACAATTGGACA 60.203 47.619 10.83 2.53 28.74 4.02
70 71 1.894466 CCCATGCTCACAATTGGACAA 59.106 47.619 10.83 0.00 28.74 3.18
71 72 2.353011 CCCATGCTCACAATTGGACAAC 60.353 50.000 10.83 0.00 28.74 3.32
72 73 2.559668 CCATGCTCACAATTGGACAACT 59.440 45.455 10.83 0.00 28.74 3.16
73 74 3.006110 CCATGCTCACAATTGGACAACTT 59.994 43.478 10.83 0.00 28.74 2.66
74 75 4.218200 CCATGCTCACAATTGGACAACTTA 59.782 41.667 10.83 0.00 28.74 2.24
75 76 4.829064 TGCTCACAATTGGACAACTTAC 57.171 40.909 10.83 0.00 0.00 2.34
76 77 3.249799 TGCTCACAATTGGACAACTTACG 59.750 43.478 10.83 0.00 0.00 3.18
77 78 3.496884 GCTCACAATTGGACAACTTACGA 59.503 43.478 10.83 0.00 0.00 3.43
78 79 4.610680 GCTCACAATTGGACAACTTACGAC 60.611 45.833 10.83 0.00 0.00 4.34
79 80 4.699637 TCACAATTGGACAACTTACGACT 58.300 39.130 10.83 0.00 0.00 4.18
80 81 4.748102 TCACAATTGGACAACTTACGACTC 59.252 41.667 10.83 0.00 0.00 3.36
81 82 4.509970 CACAATTGGACAACTTACGACTCA 59.490 41.667 10.83 0.00 0.00 3.41
82 83 5.007234 CACAATTGGACAACTTACGACTCAA 59.993 40.000 10.83 0.00 0.00 3.02
83 84 5.587043 ACAATTGGACAACTTACGACTCAAA 59.413 36.000 10.83 0.00 0.00 2.69
84 85 6.262273 ACAATTGGACAACTTACGACTCAAAT 59.738 34.615 10.83 0.00 0.00 2.32
85 86 7.442969 ACAATTGGACAACTTACGACTCAAATA 59.557 33.333 10.83 0.00 0.00 1.40
86 87 7.596749 ATTGGACAACTTACGACTCAAATAG 57.403 36.000 0.00 0.00 0.00 1.73
87 88 6.335471 TGGACAACTTACGACTCAAATAGA 57.665 37.500 0.00 0.00 0.00 1.98
88 89 6.751157 TGGACAACTTACGACTCAAATAGAA 58.249 36.000 0.00 0.00 0.00 2.10
89 90 6.643770 TGGACAACTTACGACTCAAATAGAAC 59.356 38.462 0.00 0.00 0.00 3.01
90 91 6.643770 GGACAACTTACGACTCAAATAGAACA 59.356 38.462 0.00 0.00 0.00 3.18
91 92 7.148787 GGACAACTTACGACTCAAATAGAACAG 60.149 40.741 0.00 0.00 0.00 3.16
92 93 6.645415 ACAACTTACGACTCAAATAGAACAGG 59.355 38.462 0.00 0.00 0.00 4.00
93 94 6.585695 ACTTACGACTCAAATAGAACAGGA 57.414 37.500 0.00 0.00 0.00 3.86
94 95 7.171630 ACTTACGACTCAAATAGAACAGGAT 57.828 36.000 0.00 0.00 0.00 3.24
95 96 7.612677 ACTTACGACTCAAATAGAACAGGATT 58.387 34.615 0.00 0.00 0.00 3.01
96 97 8.095169 ACTTACGACTCAAATAGAACAGGATTT 58.905 33.333 0.00 0.00 0.00 2.17
97 98 9.582431 CTTACGACTCAAATAGAACAGGATTTA 57.418 33.333 0.00 0.00 0.00 1.40
98 99 9.932207 TTACGACTCAAATAGAACAGGATTTAA 57.068 29.630 0.00 0.00 0.00 1.52
99 100 8.480643 ACGACTCAAATAGAACAGGATTTAAG 57.519 34.615 0.00 0.00 0.00 1.85
100 101 8.311836 ACGACTCAAATAGAACAGGATTTAAGA 58.688 33.333 0.00 0.00 0.00 2.10
101 102 8.596380 CGACTCAAATAGAACAGGATTTAAGAC 58.404 37.037 0.00 0.00 0.00 3.01
102 103 8.480643 ACTCAAATAGAACAGGATTTAAGACG 57.519 34.615 0.00 0.00 0.00 4.18
103 104 7.549488 ACTCAAATAGAACAGGATTTAAGACGG 59.451 37.037 0.00 0.00 0.00 4.79
104 105 7.391620 TCAAATAGAACAGGATTTAAGACGGT 58.608 34.615 0.00 0.00 0.00 4.83
105 106 7.881232 TCAAATAGAACAGGATTTAAGACGGTT 59.119 33.333 0.00 0.00 0.00 4.44
106 107 8.512138 CAAATAGAACAGGATTTAAGACGGTTT 58.488 33.333 0.00 0.00 0.00 3.27
107 108 9.729281 AAATAGAACAGGATTTAAGACGGTTTA 57.271 29.630 0.00 0.00 0.00 2.01
108 109 9.729281 AATAGAACAGGATTTAAGACGGTTTAA 57.271 29.630 0.00 0.00 0.00 1.52
109 110 9.901172 ATAGAACAGGATTTAAGACGGTTTAAT 57.099 29.630 0.00 0.00 0.00 1.40
110 111 8.631480 AGAACAGGATTTAAGACGGTTTAATT 57.369 30.769 0.00 0.00 0.00 1.40
111 112 8.512138 AGAACAGGATTTAAGACGGTTTAATTG 58.488 33.333 0.00 0.00 0.00 2.32
112 113 6.617879 ACAGGATTTAAGACGGTTTAATTGC 58.382 36.000 0.00 0.00 0.00 3.56
113 114 5.737290 CAGGATTTAAGACGGTTTAATTGCG 59.263 40.000 0.00 0.00 0.00 4.85
114 115 5.644636 AGGATTTAAGACGGTTTAATTGCGA 59.355 36.000 0.00 0.00 0.00 5.10
115 116 5.735892 GGATTTAAGACGGTTTAATTGCGAC 59.264 40.000 0.00 0.00 0.00 5.19
116 117 5.670149 TTTAAGACGGTTTAATTGCGACA 57.330 34.783 0.00 0.00 0.00 4.35
117 118 5.866335 TTAAGACGGTTTAATTGCGACAT 57.134 34.783 0.00 0.00 0.00 3.06
118 119 3.740044 AGACGGTTTAATTGCGACATG 57.260 42.857 0.00 0.00 0.00 3.21
119 120 3.071479 AGACGGTTTAATTGCGACATGT 58.929 40.909 0.00 0.00 0.00 3.21
120 121 3.500680 AGACGGTTTAATTGCGACATGTT 59.499 39.130 0.00 0.00 0.00 2.71
121 122 3.560503 ACGGTTTAATTGCGACATGTTG 58.439 40.909 8.88 8.88 0.00 3.33
122 123 3.251245 ACGGTTTAATTGCGACATGTTGA 59.749 39.130 17.70 0.00 0.00 3.18
123 124 4.083003 ACGGTTTAATTGCGACATGTTGAT 60.083 37.500 17.70 0.00 0.00 2.57
124 125 4.495472 CGGTTTAATTGCGACATGTTGATC 59.505 41.667 17.70 0.43 0.00 2.92
125 126 5.640732 GGTTTAATTGCGACATGTTGATCT 58.359 37.500 17.70 0.42 0.00 2.75
126 127 6.092748 GGTTTAATTGCGACATGTTGATCTT 58.907 36.000 17.70 8.20 0.00 2.40
127 128 6.586082 GGTTTAATTGCGACATGTTGATCTTT 59.414 34.615 17.70 6.73 0.00 2.52
128 129 7.116233 GGTTTAATTGCGACATGTTGATCTTTT 59.884 33.333 17.70 5.13 0.00 2.27
129 130 8.487176 GTTTAATTGCGACATGTTGATCTTTTT 58.513 29.630 17.70 3.85 0.00 1.94
130 131 6.456447 AATTGCGACATGTTGATCTTTTTG 57.544 33.333 17.70 0.00 0.00 2.44
131 132 3.307674 TGCGACATGTTGATCTTTTTGC 58.692 40.909 17.70 0.00 0.00 3.68
132 133 3.004629 TGCGACATGTTGATCTTTTTGCT 59.995 39.130 17.70 0.00 0.00 3.91
133 134 3.983344 GCGACATGTTGATCTTTTTGCTT 59.017 39.130 17.70 0.00 0.00 3.91
134 135 4.143473 GCGACATGTTGATCTTTTTGCTTG 60.143 41.667 17.70 0.00 0.00 4.01
135 136 4.977963 CGACATGTTGATCTTTTTGCTTGT 59.022 37.500 7.36 0.00 0.00 3.16
136 137 5.108141 CGACATGTTGATCTTTTTGCTTGTG 60.108 40.000 7.36 0.00 0.00 3.33
137 138 5.663456 ACATGTTGATCTTTTTGCTTGTGT 58.337 33.333 0.00 0.00 0.00 3.72
138 139 6.108015 ACATGTTGATCTTTTTGCTTGTGTT 58.892 32.000 0.00 0.00 0.00 3.32
139 140 6.594937 ACATGTTGATCTTTTTGCTTGTGTTT 59.405 30.769 0.00 0.00 0.00 2.83
140 141 7.763528 ACATGTTGATCTTTTTGCTTGTGTTTA 59.236 29.630 0.00 0.00 0.00 2.01
141 142 8.767085 CATGTTGATCTTTTTGCTTGTGTTTAT 58.233 29.630 0.00 0.00 0.00 1.40
142 143 8.351495 TGTTGATCTTTTTGCTTGTGTTTATC 57.649 30.769 0.00 0.00 0.00 1.75
143 144 8.196771 TGTTGATCTTTTTGCTTGTGTTTATCT 58.803 29.630 0.00 0.00 0.00 1.98
144 145 9.034544 GTTGATCTTTTTGCTTGTGTTTATCTT 57.965 29.630 0.00 0.00 0.00 2.40
145 146 9.598517 TTGATCTTTTTGCTTGTGTTTATCTTT 57.401 25.926 0.00 0.00 0.00 2.52
146 147 9.598517 TGATCTTTTTGCTTGTGTTTATCTTTT 57.401 25.926 0.00 0.00 0.00 2.27
167 168 6.525121 TTTTTCTGAACATCAGTACAGACG 57.475 37.500 7.21 0.00 44.58 4.18
168 169 3.217599 TCTGAACATCAGTACAGACGC 57.782 47.619 7.21 0.00 44.58 5.19
169 170 2.556622 TCTGAACATCAGTACAGACGCA 59.443 45.455 7.21 0.00 44.58 5.24
170 171 3.005367 TCTGAACATCAGTACAGACGCAA 59.995 43.478 7.21 0.00 44.58 4.85
171 172 3.366121 CTGAACATCAGTACAGACGCAAG 59.634 47.826 0.00 0.00 39.58 4.01
172 173 1.714794 ACATCAGTACAGACGCAAGC 58.285 50.000 0.00 0.00 45.62 4.01
173 174 0.642291 CATCAGTACAGACGCAAGCG 59.358 55.000 13.50 13.50 46.03 4.68
174 175 1.078759 ATCAGTACAGACGCAAGCGC 61.079 55.000 15.09 0.00 44.19 5.92
175 176 1.734477 CAGTACAGACGCAAGCGCT 60.734 57.895 15.09 2.64 44.19 5.92
176 177 1.444553 AGTACAGACGCAAGCGCTC 60.445 57.895 12.06 11.06 44.19 5.03
177 178 1.733041 GTACAGACGCAAGCGCTCA 60.733 57.895 12.06 0.83 44.19 4.26
178 179 1.078759 GTACAGACGCAAGCGCTCAT 61.079 55.000 12.06 0.00 44.19 2.90
179 180 0.454196 TACAGACGCAAGCGCTCATA 59.546 50.000 12.06 5.16 44.19 2.15
180 181 1.078759 ACAGACGCAAGCGCTCATAC 61.079 55.000 12.06 1.58 44.19 2.39
181 182 1.078201 CAGACGCAAGCGCTCATACA 61.078 55.000 12.06 0.00 44.19 2.29
182 183 0.179100 AGACGCAAGCGCTCATACAT 60.179 50.000 12.06 0.00 44.19 2.29
183 184 1.067060 AGACGCAAGCGCTCATACATA 59.933 47.619 12.06 0.00 44.19 2.29
184 185 1.190323 GACGCAAGCGCTCATACATAC 59.810 52.381 12.06 0.00 44.19 2.39
185 186 0.159554 CGCAAGCGCTCATACATACG 59.840 55.000 12.06 0.00 35.30 3.06
189 190 3.916439 CGCTCATACATACGCGCA 58.084 55.556 5.73 0.00 39.11 6.09
190 191 2.434688 CGCTCATACATACGCGCAT 58.565 52.632 5.73 0.00 39.11 4.73
191 192 1.613270 CGCTCATACATACGCGCATA 58.387 50.000 5.73 0.00 39.11 3.14
192 193 1.317611 CGCTCATACATACGCGCATAC 59.682 52.381 5.73 0.00 39.11 2.39
193 194 2.324860 GCTCATACATACGCGCATACA 58.675 47.619 5.73 0.00 0.00 2.29
194 195 2.090658 GCTCATACATACGCGCATACAC 59.909 50.000 5.73 0.00 0.00 2.90
195 196 3.565516 CTCATACATACGCGCATACACT 58.434 45.455 5.73 0.00 0.00 3.55
196 197 3.561503 TCATACATACGCGCATACACTC 58.438 45.455 5.73 0.00 0.00 3.51
197 198 3.003897 TCATACATACGCGCATACACTCA 59.996 43.478 5.73 0.00 0.00 3.41
198 199 1.556564 ACATACGCGCATACACTCAC 58.443 50.000 5.73 0.00 0.00 3.51
199 200 0.852777 CATACGCGCATACACTCACC 59.147 55.000 5.73 0.00 0.00 4.02
200 201 0.744874 ATACGCGCATACACTCACCT 59.255 50.000 5.73 0.00 0.00 4.00
201 202 0.099968 TACGCGCATACACTCACCTC 59.900 55.000 5.73 0.00 0.00 3.85
202 203 1.139734 CGCGCATACACTCACCTCT 59.860 57.895 8.75 0.00 0.00 3.69
203 204 0.380733 CGCGCATACACTCACCTCTA 59.619 55.000 8.75 0.00 0.00 2.43
204 205 1.001268 CGCGCATACACTCACCTCTAT 60.001 52.381 8.75 0.00 0.00 1.98
205 206 2.398498 GCGCATACACTCACCTCTATG 58.602 52.381 0.30 0.00 0.00 2.23
206 207 2.034685 GCGCATACACTCACCTCTATGA 59.965 50.000 0.30 0.00 0.00 2.15
207 208 3.490933 GCGCATACACTCACCTCTATGAA 60.491 47.826 0.30 0.00 0.00 2.57
208 209 4.797604 GCGCATACACTCACCTCTATGAAT 60.798 45.833 0.30 0.00 0.00 2.57
209 210 4.683320 CGCATACACTCACCTCTATGAATG 59.317 45.833 0.00 0.00 32.12 2.67
210 211 4.450419 GCATACACTCACCTCTATGAATGC 59.550 45.833 0.00 0.00 34.00 3.56
211 212 5.604565 CATACACTCACCTCTATGAATGCA 58.395 41.667 0.00 0.00 28.78 3.96
212 213 3.866651 ACACTCACCTCTATGAATGCAC 58.133 45.455 0.00 0.00 28.78 4.57
213 214 3.261643 ACACTCACCTCTATGAATGCACA 59.738 43.478 0.00 0.00 28.78 4.57
214 215 3.620374 CACTCACCTCTATGAATGCACAC 59.380 47.826 0.00 0.00 0.00 3.82
215 216 3.261643 ACTCACCTCTATGAATGCACACA 59.738 43.478 0.00 0.00 0.00 3.72
216 217 3.599343 TCACCTCTATGAATGCACACAC 58.401 45.455 0.00 0.00 0.00 3.82
217 218 2.349580 CACCTCTATGAATGCACACACG 59.650 50.000 0.00 0.00 0.00 4.49
218 219 1.328680 CCTCTATGAATGCACACACGC 59.671 52.381 0.00 0.00 0.00 5.34
225 226 2.747022 TGCACACACGCATACCCT 59.253 55.556 0.00 0.00 36.86 4.34
226 227 1.976112 TGCACACACGCATACCCTA 59.024 52.632 0.00 0.00 36.86 3.53
227 228 0.390603 TGCACACACGCATACCCTAC 60.391 55.000 0.00 0.00 36.86 3.18
228 229 1.087771 GCACACACGCATACCCTACC 61.088 60.000 0.00 0.00 0.00 3.18
229 230 0.461339 CACACACGCATACCCTACCC 60.461 60.000 0.00 0.00 0.00 3.69
230 231 1.145377 CACACGCATACCCTACCCC 59.855 63.158 0.00 0.00 0.00 4.95
231 232 1.002533 ACACGCATACCCTACCCCT 59.997 57.895 0.00 0.00 0.00 4.79
232 233 0.262580 ACACGCATACCCTACCCCTA 59.737 55.000 0.00 0.00 0.00 3.53
233 234 1.132945 ACACGCATACCCTACCCCTAT 60.133 52.381 0.00 0.00 0.00 2.57
234 235 2.110543 ACACGCATACCCTACCCCTATA 59.889 50.000 0.00 0.00 0.00 1.31
235 236 3.167485 CACGCATACCCTACCCCTATAA 58.833 50.000 0.00 0.00 0.00 0.98
236 237 3.194968 CACGCATACCCTACCCCTATAAG 59.805 52.174 0.00 0.00 0.00 1.73
237 238 2.167900 CGCATACCCTACCCCTATAAGC 59.832 54.545 0.00 0.00 0.00 3.09
238 239 3.178865 GCATACCCTACCCCTATAAGCA 58.821 50.000 0.00 0.00 0.00 3.91
239 240 3.055312 GCATACCCTACCCCTATAAGCAC 60.055 52.174 0.00 0.00 0.00 4.40
240 241 2.113807 ACCCTACCCCTATAAGCACC 57.886 55.000 0.00 0.00 0.00 5.01
241 242 1.584105 ACCCTACCCCTATAAGCACCT 59.416 52.381 0.00 0.00 0.00 4.00
242 243 2.021341 ACCCTACCCCTATAAGCACCTT 60.021 50.000 0.00 0.00 0.00 3.50
243 244 2.638363 CCCTACCCCTATAAGCACCTTC 59.362 54.545 0.00 0.00 0.00 3.46
244 245 3.314693 CCTACCCCTATAAGCACCTTCA 58.685 50.000 0.00 0.00 0.00 3.02
245 246 3.910627 CCTACCCCTATAAGCACCTTCAT 59.089 47.826 0.00 0.00 0.00 2.57
246 247 3.864789 ACCCCTATAAGCACCTTCATG 57.135 47.619 0.00 0.00 0.00 3.07
247 248 3.393687 ACCCCTATAAGCACCTTCATGA 58.606 45.455 0.00 0.00 0.00 3.07
248 249 3.392616 ACCCCTATAAGCACCTTCATGAG 59.607 47.826 0.00 0.00 0.00 2.90
249 250 3.648067 CCCCTATAAGCACCTTCATGAGA 59.352 47.826 0.00 0.00 0.00 3.27
250 251 4.503991 CCCCTATAAGCACCTTCATGAGAC 60.504 50.000 0.00 0.00 0.00 3.36
251 252 4.346418 CCCTATAAGCACCTTCATGAGACT 59.654 45.833 0.00 0.00 0.00 3.24
252 253 5.295950 CCTATAAGCACCTTCATGAGACTG 58.704 45.833 0.00 0.00 0.00 3.51
253 254 5.069648 CCTATAAGCACCTTCATGAGACTGA 59.930 44.000 0.00 0.00 0.00 3.41
254 255 3.331478 AAGCACCTTCATGAGACTGAG 57.669 47.619 0.00 0.00 0.00 3.35
255 256 1.066286 AGCACCTTCATGAGACTGAGC 60.066 52.381 0.00 0.00 0.00 4.26
256 257 2.011046 GCACCTTCATGAGACTGAGCC 61.011 57.143 0.00 0.00 0.00 4.70
257 258 0.534412 ACCTTCATGAGACTGAGCCG 59.466 55.000 0.00 0.00 0.00 5.52
258 259 0.179089 CCTTCATGAGACTGAGCCGG 60.179 60.000 0.00 0.00 0.00 6.13
259 260 0.809241 CTTCATGAGACTGAGCCGGC 60.809 60.000 21.89 21.89 0.00 6.13
260 261 1.543944 TTCATGAGACTGAGCCGGCA 61.544 55.000 31.54 7.98 0.00 5.69
261 262 1.145598 CATGAGACTGAGCCGGCAT 59.854 57.895 31.54 14.28 0.00 4.40
262 263 1.145598 ATGAGACTGAGCCGGCATG 59.854 57.895 31.54 19.90 0.00 4.06
263 264 1.620739 ATGAGACTGAGCCGGCATGT 61.621 55.000 31.54 23.16 0.00 3.21
264 265 1.520342 GAGACTGAGCCGGCATGTC 60.520 63.158 31.54 29.08 0.00 3.06
265 266 2.230994 GAGACTGAGCCGGCATGTCA 62.231 60.000 32.41 25.37 0.00 3.58
266 267 1.153289 GACTGAGCCGGCATGTCAT 60.153 57.895 31.54 13.17 0.00 3.06
267 268 1.153289 ACTGAGCCGGCATGTCATC 60.153 57.895 31.54 16.99 0.00 2.92
268 269 1.145598 CTGAGCCGGCATGTCATCT 59.854 57.895 31.54 4.27 0.00 2.90
269 270 0.463295 CTGAGCCGGCATGTCATCTT 60.463 55.000 31.54 3.33 0.00 2.40
270 271 0.745486 TGAGCCGGCATGTCATCTTG 60.745 55.000 31.54 0.00 0.00 3.02
271 272 0.462581 GAGCCGGCATGTCATCTTGA 60.463 55.000 31.54 0.00 0.00 3.02
272 273 0.035152 AGCCGGCATGTCATCTTGAA 60.035 50.000 31.54 0.00 0.00 2.69
273 274 0.810648 GCCGGCATGTCATCTTGAAA 59.189 50.000 24.80 0.00 0.00 2.69
274 275 1.406539 GCCGGCATGTCATCTTGAAAT 59.593 47.619 24.80 0.00 0.00 2.17
275 276 2.159198 GCCGGCATGTCATCTTGAAATT 60.159 45.455 24.80 0.00 0.00 1.82
276 277 3.676873 GCCGGCATGTCATCTTGAAATTT 60.677 43.478 24.80 0.00 0.00 1.82
277 278 4.439974 GCCGGCATGTCATCTTGAAATTTA 60.440 41.667 24.80 0.00 0.00 1.40
278 279 5.036737 CCGGCATGTCATCTTGAAATTTAC 58.963 41.667 0.00 0.00 0.00 2.01
279 280 4.730042 CGGCATGTCATCTTGAAATTTACG 59.270 41.667 0.00 0.00 0.00 3.18
280 281 5.447144 CGGCATGTCATCTTGAAATTTACGA 60.447 40.000 0.00 0.00 0.00 3.43
281 282 6.321717 GGCATGTCATCTTGAAATTTACGAA 58.678 36.000 0.00 0.00 0.00 3.85
282 283 6.470235 GGCATGTCATCTTGAAATTTACGAAG 59.530 38.462 0.00 0.00 0.00 3.79
284 285 7.217070 GCATGTCATCTTGAAATTTACGAAGTC 59.783 37.037 0.00 0.00 43.93 3.01
285 286 7.722795 TGTCATCTTGAAATTTACGAAGTCA 57.277 32.000 0.00 0.00 43.93 3.41
286 287 7.572759 TGTCATCTTGAAATTTACGAAGTCAC 58.427 34.615 0.00 0.00 43.93 3.67
287 288 7.015877 GTCATCTTGAAATTTACGAAGTCACC 58.984 38.462 0.00 0.00 43.93 4.02
288 289 5.585500 TCTTGAAATTTACGAAGTCACCG 57.415 39.130 0.00 0.00 43.93 4.94
289 290 5.291178 TCTTGAAATTTACGAAGTCACCGA 58.709 37.500 0.00 0.00 43.93 4.69
290 291 5.754406 TCTTGAAATTTACGAAGTCACCGAA 59.246 36.000 0.00 0.00 43.93 4.30
291 292 5.585500 TGAAATTTACGAAGTCACCGAAG 57.415 39.130 0.00 0.00 43.93 3.79
303 304 4.052229 CCGAAGGCACCTCGTCGT 62.052 66.667 9.32 0.00 46.14 4.34
304 305 2.504244 CGAAGGCACCTCGTCGTC 60.504 66.667 3.16 0.00 34.79 4.20
305 306 2.504244 GAAGGCACCTCGTCGTCG 60.504 66.667 0.00 0.00 38.55 5.12
306 307 2.974489 GAAGGCACCTCGTCGTCGA 61.974 63.158 4.42 4.42 44.12 4.20
307 308 3.264866 AAGGCACCTCGTCGTCGAC 62.265 63.158 15.51 15.51 41.35 4.20
325 326 2.979649 GGGGACGTCTCCTTCCAC 59.020 66.667 27.83 0.17 36.68 4.02
326 327 1.609794 GGGGACGTCTCCTTCCACT 60.610 63.158 27.83 0.00 36.68 4.00
327 328 0.324091 GGGGACGTCTCCTTCCACTA 60.324 60.000 27.83 0.00 36.68 2.74
328 329 1.553706 GGGACGTCTCCTTCCACTAA 58.446 55.000 16.46 0.00 36.68 2.24
329 330 1.897802 GGGACGTCTCCTTCCACTAAA 59.102 52.381 16.46 0.00 36.68 1.85
330 331 2.301009 GGGACGTCTCCTTCCACTAAAA 59.699 50.000 16.46 0.00 36.68 1.52
331 332 3.586892 GGACGTCTCCTTCCACTAAAAG 58.413 50.000 16.46 0.00 33.07 2.27
332 333 2.994578 GACGTCTCCTTCCACTAAAAGC 59.005 50.000 8.70 0.00 0.00 3.51
333 334 1.993370 CGTCTCCTTCCACTAAAAGCG 59.007 52.381 0.00 0.00 0.00 4.68
334 335 1.732809 GTCTCCTTCCACTAAAAGCGC 59.267 52.381 0.00 0.00 0.00 5.92
335 336 1.346395 TCTCCTTCCACTAAAAGCGCA 59.654 47.619 11.47 0.00 0.00 6.09
336 337 2.027192 TCTCCTTCCACTAAAAGCGCAT 60.027 45.455 11.47 0.00 0.00 4.73
337 338 2.352960 CTCCTTCCACTAAAAGCGCATC 59.647 50.000 11.47 0.00 0.00 3.91
338 339 1.062587 CCTTCCACTAAAAGCGCATCG 59.937 52.381 11.47 0.00 0.00 3.84
352 353 3.673746 CGCATCGCCTGAAATTCTTAA 57.326 42.857 0.00 0.00 0.00 1.85
353 354 4.014847 CGCATCGCCTGAAATTCTTAAA 57.985 40.909 0.00 0.00 0.00 1.52
354 355 4.601019 CGCATCGCCTGAAATTCTTAAAT 58.399 39.130 0.00 0.00 0.00 1.40
355 356 5.747565 CGCATCGCCTGAAATTCTTAAATA 58.252 37.500 0.00 0.00 0.00 1.40
356 357 6.198687 CGCATCGCCTGAAATTCTTAAATAA 58.801 36.000 0.00 0.00 0.00 1.40
357 358 6.690957 CGCATCGCCTGAAATTCTTAAATAAA 59.309 34.615 0.00 0.00 0.00 1.40
358 359 7.379529 CGCATCGCCTGAAATTCTTAAATAAAT 59.620 33.333 0.00 0.00 0.00 1.40
359 360 8.694394 GCATCGCCTGAAATTCTTAAATAAATC 58.306 33.333 0.00 0.00 0.00 2.17
360 361 9.956720 CATCGCCTGAAATTCTTAAATAAATCT 57.043 29.630 0.00 0.00 0.00 2.40
363 364 9.884465 CGCCTGAAATTCTTAAATAAATCTAGG 57.116 33.333 0.00 0.00 0.00 3.02
376 377 8.621532 AAATAAATCTAGGAATAATGCGAGCA 57.378 30.769 0.00 0.00 0.00 4.26
377 378 5.931441 AAATCTAGGAATAATGCGAGCAC 57.069 39.130 0.00 0.00 0.00 4.40
378 379 3.386768 TCTAGGAATAATGCGAGCACC 57.613 47.619 0.00 0.00 0.00 5.01
379 380 2.698274 TCTAGGAATAATGCGAGCACCA 59.302 45.455 0.00 0.00 0.00 4.17
380 381 1.959042 AGGAATAATGCGAGCACCAG 58.041 50.000 0.00 0.00 0.00 4.00
381 382 0.947244 GGAATAATGCGAGCACCAGG 59.053 55.000 0.00 0.00 0.00 4.45
382 383 1.475034 GGAATAATGCGAGCACCAGGA 60.475 52.381 0.00 0.00 0.00 3.86
383 384 2.498167 GAATAATGCGAGCACCAGGAT 58.502 47.619 0.00 0.00 0.00 3.24
384 385 2.645838 ATAATGCGAGCACCAGGATT 57.354 45.000 0.00 0.00 33.17 3.01
385 386 2.418368 TAATGCGAGCACCAGGATTT 57.582 45.000 0.00 0.00 31.11 2.17
386 387 0.813184 AATGCGAGCACCAGGATTTG 59.187 50.000 0.00 0.00 0.00 2.32
387 388 0.035152 ATGCGAGCACCAGGATTTGA 60.035 50.000 0.00 0.00 0.00 2.69
388 389 0.250684 TGCGAGCACCAGGATTTGAA 60.251 50.000 0.00 0.00 0.00 2.69
389 390 0.169009 GCGAGCACCAGGATTTGAAC 59.831 55.000 0.00 0.00 0.00 3.18
390 391 0.804989 CGAGCACCAGGATTTGAACC 59.195 55.000 0.00 0.00 0.00 3.62
391 392 1.177401 GAGCACCAGGATTTGAACCC 58.823 55.000 0.00 0.00 0.00 4.11
392 393 0.779997 AGCACCAGGATTTGAACCCT 59.220 50.000 0.00 0.00 0.00 4.34
397 398 1.549203 CAGGATTTGAACCCTGGTGG 58.451 55.000 0.00 0.00 44.68 4.61
407 408 2.368192 CCTGGTGGGCTGGGGATA 60.368 66.667 0.00 0.00 0.00 2.59
408 409 2.757124 CCTGGTGGGCTGGGGATAC 61.757 68.421 0.00 0.00 0.00 2.24
424 425 3.232662 GGATACCACTCTCCCTCTAACC 58.767 54.545 0.00 0.00 0.00 2.85
425 426 3.373877 GGATACCACTCTCCCTCTAACCA 60.374 52.174 0.00 0.00 0.00 3.67
426 427 2.950990 ACCACTCTCCCTCTAACCAT 57.049 50.000 0.00 0.00 0.00 3.55
427 428 2.753247 ACCACTCTCCCTCTAACCATC 58.247 52.381 0.00 0.00 0.00 3.51
428 429 2.043227 CCACTCTCCCTCTAACCATCC 58.957 57.143 0.00 0.00 0.00 3.51
429 430 2.626950 CCACTCTCCCTCTAACCATCCA 60.627 54.545 0.00 0.00 0.00 3.41
430 431 3.107601 CACTCTCCCTCTAACCATCCAA 58.892 50.000 0.00 0.00 0.00 3.53
431 432 3.108376 ACTCTCCCTCTAACCATCCAAC 58.892 50.000 0.00 0.00 0.00 3.77
432 433 2.436173 CTCTCCCTCTAACCATCCAACC 59.564 54.545 0.00 0.00 0.00 3.77
433 434 2.196595 CTCCCTCTAACCATCCAACCA 58.803 52.381 0.00 0.00 0.00 3.67
434 435 1.913419 TCCCTCTAACCATCCAACCAC 59.087 52.381 0.00 0.00 0.00 4.16
435 436 1.633432 CCCTCTAACCATCCAACCACA 59.367 52.381 0.00 0.00 0.00 4.17
436 437 2.356125 CCCTCTAACCATCCAACCACAG 60.356 54.545 0.00 0.00 0.00 3.66
437 438 2.356125 CCTCTAACCATCCAACCACAGG 60.356 54.545 0.00 0.00 0.00 4.00
438 439 2.305927 CTCTAACCATCCAACCACAGGT 59.694 50.000 0.00 0.00 37.65 4.00
448 449 4.157607 CCACAGGTTGGTTCGCTT 57.842 55.556 0.00 0.00 41.10 4.68
449 450 1.654220 CCACAGGTTGGTTCGCTTG 59.346 57.895 0.00 0.00 41.10 4.01
450 451 1.008538 CACAGGTTGGTTCGCTTGC 60.009 57.895 0.00 0.00 0.00 4.01
451 452 1.152963 ACAGGTTGGTTCGCTTGCT 60.153 52.632 0.00 0.00 0.00 3.91
452 453 0.751643 ACAGGTTGGTTCGCTTGCTT 60.752 50.000 0.00 0.00 0.00 3.91
459 460 1.266718 TGGTTCGCTTGCTTGATCAAC 59.733 47.619 3.38 2.70 0.00 3.18
495 496 5.820947 CAGACCTAATTTTAACAGCCGGTAT 59.179 40.000 1.90 0.00 0.00 2.73
536 537 6.295405 GGCTCCCTCTTTAGTGAGATTATACC 60.295 46.154 0.00 0.00 36.23 2.73
559 560 5.180271 CAGCAAATGCCTGAACCAAAATAT 58.820 37.500 0.94 0.00 43.38 1.28
652 688 2.754375 CTGCCCACCTAAACCGGT 59.246 61.111 0.00 0.00 37.93 5.28
722 758 6.568869 AGAAATAGTTGAGGATCGAACTCTG 58.431 40.000 17.84 0.00 37.53 3.35
1068 1105 5.418840 GGTTCATAGATCTTTGGGCTTTGAA 59.581 40.000 12.51 0.00 30.72 2.69
1073 1110 2.151502 TCTTTGGGCTTTGAACACCA 57.848 45.000 0.00 0.00 0.00 4.17
1105 1142 7.231467 AGAGACTTTACAAATAAAAGCAGGGA 58.769 34.615 0.00 0.00 37.44 4.20
1740 1782 6.347859 AGTTCTCTACCAGGAACTTTGTAG 57.652 41.667 0.00 0.00 46.55 2.74
1742 1784 4.157246 TCTCTACCAGGAACTTTGTAGCA 58.843 43.478 0.00 0.00 39.62 3.49
1824 1866 2.983402 TATTCGTCGGAATAGCGGAG 57.017 50.000 0.00 0.00 42.71 4.63
2064 2114 3.181329 TCTCTGCCAGGAACCAGATTTA 58.819 45.455 0.00 0.00 37.45 1.40
2120 2170 6.466885 TCTACCAACTGAGCTATTCTAACC 57.533 41.667 0.00 0.00 0.00 2.85
2121 2171 6.195700 TCTACCAACTGAGCTATTCTAACCT 58.804 40.000 0.00 0.00 0.00 3.50
2122 2172 5.763876 ACCAACTGAGCTATTCTAACCTT 57.236 39.130 0.00 0.00 0.00 3.50
2123 2173 6.128138 ACCAACTGAGCTATTCTAACCTTT 57.872 37.500 0.00 0.00 0.00 3.11
2124 2174 6.543735 ACCAACTGAGCTATTCTAACCTTTT 58.456 36.000 0.00 0.00 0.00 2.27
2125 2175 6.655425 ACCAACTGAGCTATTCTAACCTTTTC 59.345 38.462 0.00 0.00 0.00 2.29
2126 2176 6.881602 CCAACTGAGCTATTCTAACCTTTTCT 59.118 38.462 0.00 0.00 0.00 2.52
2127 2177 7.391833 CCAACTGAGCTATTCTAACCTTTTCTT 59.608 37.037 0.00 0.00 0.00 2.52
2128 2178 7.913674 ACTGAGCTATTCTAACCTTTTCTTG 57.086 36.000 0.00 0.00 0.00 3.02
2129 2179 7.454225 ACTGAGCTATTCTAACCTTTTCTTGT 58.546 34.615 0.00 0.00 0.00 3.16
2130 2180 7.389053 ACTGAGCTATTCTAACCTTTTCTTGTG 59.611 37.037 0.00 0.00 0.00 3.33
2131 2181 6.149474 TGAGCTATTCTAACCTTTTCTTGTGC 59.851 38.462 0.00 0.00 0.00 4.57
2132 2182 6.003950 AGCTATTCTAACCTTTTCTTGTGCA 58.996 36.000 0.00 0.00 0.00 4.57
2133 2183 6.660949 AGCTATTCTAACCTTTTCTTGTGCAT 59.339 34.615 0.00 0.00 0.00 3.96
2134 2184 6.969473 GCTATTCTAACCTTTTCTTGTGCATC 59.031 38.462 0.00 0.00 0.00 3.91
2135 2185 6.899393 ATTCTAACCTTTTCTTGTGCATCA 57.101 33.333 0.00 0.00 0.00 3.07
2136 2186 6.899393 TTCTAACCTTTTCTTGTGCATCAT 57.101 33.333 0.00 0.00 0.00 2.45
2137 2187 6.500684 TCTAACCTTTTCTTGTGCATCATC 57.499 37.500 0.00 0.00 0.00 2.92
2138 2188 4.525912 AACCTTTTCTTGTGCATCATCC 57.474 40.909 0.00 0.00 0.00 3.51
2139 2189 3.771216 ACCTTTTCTTGTGCATCATCCT 58.229 40.909 0.00 0.00 0.00 3.24
2140 2190 4.922206 ACCTTTTCTTGTGCATCATCCTA 58.078 39.130 0.00 0.00 0.00 2.94
2141 2191 4.946157 ACCTTTTCTTGTGCATCATCCTAG 59.054 41.667 0.00 0.00 0.00 3.02
2142 2192 4.946157 CCTTTTCTTGTGCATCATCCTAGT 59.054 41.667 0.00 0.00 0.00 2.57
2143 2193 6.115446 CCTTTTCTTGTGCATCATCCTAGTA 58.885 40.000 0.00 0.00 0.00 1.82
2144 2194 6.259608 CCTTTTCTTGTGCATCATCCTAGTAG 59.740 42.308 0.00 0.00 0.00 2.57
2145 2195 6.544928 TTTCTTGTGCATCATCCTAGTAGA 57.455 37.500 0.00 0.00 0.00 2.59
2146 2196 5.781210 TCTTGTGCATCATCCTAGTAGAG 57.219 43.478 0.00 0.00 0.00 2.43
2147 2197 5.204292 TCTTGTGCATCATCCTAGTAGAGT 58.796 41.667 0.00 0.00 0.00 3.24
2148 2198 6.365520 TCTTGTGCATCATCCTAGTAGAGTA 58.634 40.000 0.00 0.00 0.00 2.59
2149 2199 7.007116 TCTTGTGCATCATCCTAGTAGAGTAT 58.993 38.462 0.00 0.00 0.00 2.12
2150 2200 7.507277 TCTTGTGCATCATCCTAGTAGAGTATT 59.493 37.037 0.00 0.00 0.00 1.89
2151 2201 7.603180 TGTGCATCATCCTAGTAGAGTATTT 57.397 36.000 0.00 0.00 0.00 1.40
2152 2202 7.436933 TGTGCATCATCCTAGTAGAGTATTTG 58.563 38.462 0.00 0.00 0.00 2.32
2153 2203 7.069950 TGTGCATCATCCTAGTAGAGTATTTGT 59.930 37.037 0.00 0.00 0.00 2.83
2154 2204 8.577296 GTGCATCATCCTAGTAGAGTATTTGTA 58.423 37.037 0.00 0.00 0.00 2.41
2155 2205 9.314133 TGCATCATCCTAGTAGAGTATTTGTAT 57.686 33.333 0.00 0.00 0.00 2.29
2156 2206 9.796120 GCATCATCCTAGTAGAGTATTTGTATC 57.204 37.037 0.00 0.00 0.00 2.24
2288 2338 3.625649 AGGATTTTCAGTCCTCTGCTC 57.374 47.619 0.00 0.00 42.38 4.26
2289 2339 3.180507 AGGATTTTCAGTCCTCTGCTCT 58.819 45.455 0.00 0.00 42.38 4.09
2290 2340 4.357325 AGGATTTTCAGTCCTCTGCTCTA 58.643 43.478 0.00 0.00 42.38 2.43
2291 2341 4.161377 AGGATTTTCAGTCCTCTGCTCTAC 59.839 45.833 0.00 0.00 42.38 2.59
2292 2342 3.963428 TTTTCAGTCCTCTGCTCTACC 57.037 47.619 0.00 0.00 41.10 3.18
2293 2343 2.604912 TTCAGTCCTCTGCTCTACCA 57.395 50.000 0.00 0.00 41.10 3.25
2294 2344 2.604912 TCAGTCCTCTGCTCTACCAA 57.395 50.000 0.00 0.00 41.10 3.67
2295 2345 2.171840 TCAGTCCTCTGCTCTACCAAC 58.828 52.381 0.00 0.00 41.10 3.77
2296 2346 2.175202 CAGTCCTCTGCTCTACCAACT 58.825 52.381 0.00 0.00 34.79 3.16
2297 2347 2.094286 CAGTCCTCTGCTCTACCAACTG 60.094 54.545 0.00 0.00 34.79 3.16
2298 2348 2.171840 GTCCTCTGCTCTACCAACTGA 58.828 52.381 0.00 0.00 0.00 3.41
2299 2349 2.165437 GTCCTCTGCTCTACCAACTGAG 59.835 54.545 0.00 0.00 0.00 3.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 8.006027 CGCACATACATTCTACATTCTACATTG 58.994 37.037 0.00 0.00 0.00 2.82
3 4 7.710907 ACGCACATACATTCTACATTCTACATT 59.289 33.333 0.00 0.00 0.00 2.71
4 5 7.169813 CACGCACATACATTCTACATTCTACAT 59.830 37.037 0.00 0.00 0.00 2.29
5 6 6.475402 CACGCACATACATTCTACATTCTACA 59.525 38.462 0.00 0.00 0.00 2.74
6 7 6.475727 ACACGCACATACATTCTACATTCTAC 59.524 38.462 0.00 0.00 0.00 2.59
7 8 6.569780 ACACGCACATACATTCTACATTCTA 58.430 36.000 0.00 0.00 0.00 2.10
8 9 5.419542 ACACGCACATACATTCTACATTCT 58.580 37.500 0.00 0.00 0.00 2.40
9 10 5.718649 ACACGCACATACATTCTACATTC 57.281 39.130 0.00 0.00 0.00 2.67
10 11 6.035650 GTGTACACGCACATACATTCTACATT 59.964 38.462 10.84 0.00 39.07 2.71
11 12 5.518847 GTGTACACGCACATACATTCTACAT 59.481 40.000 10.84 0.00 39.07 2.29
12 13 4.860352 GTGTACACGCACATACATTCTACA 59.140 41.667 10.84 0.00 39.07 2.74
13 14 5.004440 CAGTGTACACGCACATACATTCTAC 59.996 44.000 19.93 0.00 41.52 2.59
14 15 5.099575 CAGTGTACACGCACATACATTCTA 58.900 41.667 19.93 0.00 41.52 2.10
15 16 3.926527 CAGTGTACACGCACATACATTCT 59.073 43.478 19.93 0.00 41.52 2.40
16 17 3.483574 GCAGTGTACACGCACATACATTC 60.484 47.826 26.74 1.51 41.52 2.67
17 18 2.415168 GCAGTGTACACGCACATACATT 59.585 45.455 26.74 4.95 41.52 2.71
18 19 1.999735 GCAGTGTACACGCACATACAT 59.000 47.619 26.74 5.58 41.52 2.29
19 20 1.000394 AGCAGTGTACACGCACATACA 60.000 47.619 30.36 0.00 41.52 2.29
20 21 1.654105 GAGCAGTGTACACGCACATAC 59.346 52.381 30.36 18.22 41.52 2.39
21 22 1.544246 AGAGCAGTGTACACGCACATA 59.456 47.619 30.36 0.00 41.52 2.29
22 23 0.318441 AGAGCAGTGTACACGCACAT 59.682 50.000 30.36 18.15 41.52 3.21
23 24 0.104120 AAGAGCAGTGTACACGCACA 59.896 50.000 30.36 0.00 41.52 4.57
24 25 1.192534 GAAAGAGCAGTGTACACGCAC 59.807 52.381 30.36 26.36 39.51 5.34
25 26 1.497991 GAAAGAGCAGTGTACACGCA 58.502 50.000 30.36 0.00 34.80 5.24
26 27 0.435008 CGAAAGAGCAGTGTACACGC 59.565 55.000 25.33 25.33 36.20 5.34
27 28 1.060713 CCGAAAGAGCAGTGTACACG 58.939 55.000 19.93 15.36 36.20 4.49
28 29 2.059541 GTCCGAAAGAGCAGTGTACAC 58.940 52.381 18.56 18.56 0.00 2.90
29 30 1.684450 TGTCCGAAAGAGCAGTGTACA 59.316 47.619 0.00 0.00 0.00 2.90
30 31 2.059541 GTGTCCGAAAGAGCAGTGTAC 58.940 52.381 0.00 0.00 0.00 2.90
31 32 1.000506 GGTGTCCGAAAGAGCAGTGTA 59.999 52.381 0.00 0.00 0.00 2.90
32 33 0.249911 GGTGTCCGAAAGAGCAGTGT 60.250 55.000 0.00 0.00 0.00 3.55
33 34 0.951040 GGGTGTCCGAAAGAGCAGTG 60.951 60.000 0.00 0.00 0.00 3.66
34 35 1.371558 GGGTGTCCGAAAGAGCAGT 59.628 57.895 0.00 0.00 0.00 4.40
35 36 0.036010 ATGGGTGTCCGAAAGAGCAG 60.036 55.000 0.00 0.00 35.24 4.24
36 37 0.321564 CATGGGTGTCCGAAAGAGCA 60.322 55.000 0.00 0.00 35.24 4.26
37 38 1.648467 GCATGGGTGTCCGAAAGAGC 61.648 60.000 0.00 0.00 35.24 4.09
38 39 0.036010 AGCATGGGTGTCCGAAAGAG 60.036 55.000 0.00 0.00 35.24 2.85
39 40 0.036388 GAGCATGGGTGTCCGAAAGA 60.036 55.000 0.00 0.00 35.24 2.52
40 41 0.321564 TGAGCATGGGTGTCCGAAAG 60.322 55.000 0.00 0.00 35.24 2.62
41 42 0.605319 GTGAGCATGGGTGTCCGAAA 60.605 55.000 0.00 0.00 35.24 3.46
42 43 1.003839 GTGAGCATGGGTGTCCGAA 60.004 57.895 0.00 0.00 35.24 4.30
43 44 1.763546 TTGTGAGCATGGGTGTCCGA 61.764 55.000 0.00 0.00 35.24 4.55
44 45 0.677731 ATTGTGAGCATGGGTGTCCG 60.678 55.000 0.00 0.00 35.24 4.79
45 46 1.203052 CAATTGTGAGCATGGGTGTCC 59.797 52.381 0.00 0.00 0.00 4.02
46 47 1.203052 CCAATTGTGAGCATGGGTGTC 59.797 52.381 4.43 0.00 0.00 3.67
47 48 1.203038 TCCAATTGTGAGCATGGGTGT 60.203 47.619 4.43 0.00 33.66 4.16
48 49 1.203052 GTCCAATTGTGAGCATGGGTG 59.797 52.381 4.43 0.00 33.66 4.61
49 50 1.203038 TGTCCAATTGTGAGCATGGGT 60.203 47.619 4.43 0.00 33.66 4.51
50 51 1.548081 TGTCCAATTGTGAGCATGGG 58.452 50.000 4.43 0.00 33.66 4.00
51 52 2.559668 AGTTGTCCAATTGTGAGCATGG 59.440 45.455 4.43 0.00 0.00 3.66
52 53 3.928727 AGTTGTCCAATTGTGAGCATG 57.071 42.857 4.43 0.00 0.00 4.06
53 54 4.083324 CGTAAGTTGTCCAATTGTGAGCAT 60.083 41.667 4.43 0.00 0.00 3.79
54 55 3.249799 CGTAAGTTGTCCAATTGTGAGCA 59.750 43.478 4.43 1.15 0.00 4.26
55 56 3.496884 TCGTAAGTTGTCCAATTGTGAGC 59.503 43.478 4.43 0.00 39.48 4.26
56 57 4.750098 AGTCGTAAGTTGTCCAATTGTGAG 59.250 41.667 4.43 0.00 39.48 3.51
57 58 4.699637 AGTCGTAAGTTGTCCAATTGTGA 58.300 39.130 4.43 0.00 39.48 3.58
58 59 4.509970 TGAGTCGTAAGTTGTCCAATTGTG 59.490 41.667 4.43 0.00 39.48 3.33
59 60 4.699637 TGAGTCGTAAGTTGTCCAATTGT 58.300 39.130 4.43 0.00 39.48 2.71
60 61 5.666969 TTGAGTCGTAAGTTGTCCAATTG 57.333 39.130 0.00 0.00 39.48 2.32
61 62 6.877611 ATTTGAGTCGTAAGTTGTCCAATT 57.122 33.333 0.00 0.00 39.48 2.32
62 63 7.383687 TCTATTTGAGTCGTAAGTTGTCCAAT 58.616 34.615 0.00 0.00 39.48 3.16
63 64 6.751157 TCTATTTGAGTCGTAAGTTGTCCAA 58.249 36.000 0.00 0.00 39.48 3.53
64 65 6.335471 TCTATTTGAGTCGTAAGTTGTCCA 57.665 37.500 0.00 0.00 39.48 4.02
65 66 6.643770 TGTTCTATTTGAGTCGTAAGTTGTCC 59.356 38.462 0.00 0.00 39.48 4.02
66 67 7.148787 CCTGTTCTATTTGAGTCGTAAGTTGTC 60.149 40.741 0.00 0.00 39.48 3.18
67 68 6.645415 CCTGTTCTATTTGAGTCGTAAGTTGT 59.355 38.462 0.00 0.00 39.48 3.32
68 69 6.866770 TCCTGTTCTATTTGAGTCGTAAGTTG 59.133 38.462 0.00 0.00 39.48 3.16
69 70 6.989659 TCCTGTTCTATTTGAGTCGTAAGTT 58.010 36.000 0.00 0.00 39.48 2.66
70 71 6.585695 TCCTGTTCTATTTGAGTCGTAAGT 57.414 37.500 0.00 0.00 39.48 2.24
71 72 8.480643 AAATCCTGTTCTATTTGAGTCGTAAG 57.519 34.615 0.00 0.00 0.00 2.34
72 73 9.932207 TTAAATCCTGTTCTATTTGAGTCGTAA 57.068 29.630 0.00 0.00 0.00 3.18
73 74 9.582431 CTTAAATCCTGTTCTATTTGAGTCGTA 57.418 33.333 0.00 0.00 29.04 3.43
74 75 8.311836 TCTTAAATCCTGTTCTATTTGAGTCGT 58.688 33.333 0.00 0.00 33.06 4.34
75 76 8.596380 GTCTTAAATCCTGTTCTATTTGAGTCG 58.404 37.037 0.00 0.00 33.06 4.18
76 77 8.596380 CGTCTTAAATCCTGTTCTATTTGAGTC 58.404 37.037 0.00 0.00 33.06 3.36
77 78 7.549488 CCGTCTTAAATCCTGTTCTATTTGAGT 59.451 37.037 0.00 0.00 33.06 3.41
78 79 7.549488 ACCGTCTTAAATCCTGTTCTATTTGAG 59.451 37.037 0.00 0.00 32.72 3.02
79 80 7.391620 ACCGTCTTAAATCCTGTTCTATTTGA 58.608 34.615 0.00 0.00 0.00 2.69
80 81 7.611213 ACCGTCTTAAATCCTGTTCTATTTG 57.389 36.000 0.00 0.00 0.00 2.32
81 82 8.631480 AAACCGTCTTAAATCCTGTTCTATTT 57.369 30.769 0.00 0.00 0.00 1.40
82 83 9.729281 TTAAACCGTCTTAAATCCTGTTCTATT 57.271 29.630 0.00 0.00 0.00 1.73
83 84 9.901172 ATTAAACCGTCTTAAATCCTGTTCTAT 57.099 29.630 0.00 0.00 0.00 1.98
84 85 9.729281 AATTAAACCGTCTTAAATCCTGTTCTA 57.271 29.630 0.00 0.00 0.00 2.10
85 86 8.512138 CAATTAAACCGTCTTAAATCCTGTTCT 58.488 33.333 0.00 0.00 0.00 3.01
86 87 7.272731 GCAATTAAACCGTCTTAAATCCTGTTC 59.727 37.037 0.00 0.00 0.00 3.18
87 88 7.088272 GCAATTAAACCGTCTTAAATCCTGTT 58.912 34.615 0.00 0.00 0.00 3.16
88 89 6.617879 GCAATTAAACCGTCTTAAATCCTGT 58.382 36.000 0.00 0.00 0.00 4.00
89 90 5.737290 CGCAATTAAACCGTCTTAAATCCTG 59.263 40.000 0.00 0.00 0.00 3.86
90 91 5.644636 TCGCAATTAAACCGTCTTAAATCCT 59.355 36.000 0.00 0.00 0.00 3.24
91 92 5.735892 GTCGCAATTAAACCGTCTTAAATCC 59.264 40.000 0.00 0.00 0.00 3.01
92 93 6.308675 TGTCGCAATTAAACCGTCTTAAATC 58.691 36.000 0.00 0.00 0.00 2.17
93 94 6.243811 TGTCGCAATTAAACCGTCTTAAAT 57.756 33.333 0.00 0.00 0.00 1.40
94 95 5.670149 TGTCGCAATTAAACCGTCTTAAA 57.330 34.783 0.00 0.00 0.00 1.52
95 96 5.179742 ACATGTCGCAATTAAACCGTCTTAA 59.820 36.000 0.00 0.00 0.00 1.85
96 97 4.691685 ACATGTCGCAATTAAACCGTCTTA 59.308 37.500 0.00 0.00 0.00 2.10
97 98 3.500680 ACATGTCGCAATTAAACCGTCTT 59.499 39.130 0.00 0.00 0.00 3.01
98 99 3.071479 ACATGTCGCAATTAAACCGTCT 58.929 40.909 0.00 0.00 0.00 4.18
99 100 3.465122 ACATGTCGCAATTAAACCGTC 57.535 42.857 0.00 0.00 0.00 4.79
100 101 3.251245 TCAACATGTCGCAATTAAACCGT 59.749 39.130 0.00 0.00 0.00 4.83
101 102 3.816091 TCAACATGTCGCAATTAAACCG 58.184 40.909 0.00 0.00 0.00 4.44
102 103 5.640732 AGATCAACATGTCGCAATTAAACC 58.359 37.500 0.00 0.00 0.00 3.27
103 104 7.566858 AAAGATCAACATGTCGCAATTAAAC 57.433 32.000 0.00 0.00 0.00 2.01
104 105 8.486383 CAAAAAGATCAACATGTCGCAATTAAA 58.514 29.630 0.00 0.00 0.00 1.52
105 106 7.359097 GCAAAAAGATCAACATGTCGCAATTAA 60.359 33.333 0.00 0.00 0.00 1.40
106 107 6.089283 GCAAAAAGATCAACATGTCGCAATTA 59.911 34.615 0.00 0.00 0.00 1.40
107 108 5.107375 GCAAAAAGATCAACATGTCGCAATT 60.107 36.000 0.00 0.00 0.00 2.32
108 109 4.386652 GCAAAAAGATCAACATGTCGCAAT 59.613 37.500 0.00 0.00 0.00 3.56
109 110 3.735240 GCAAAAAGATCAACATGTCGCAA 59.265 39.130 0.00 0.00 0.00 4.85
110 111 3.004629 AGCAAAAAGATCAACATGTCGCA 59.995 39.130 0.00 0.00 0.00 5.10
111 112 3.568538 AGCAAAAAGATCAACATGTCGC 58.431 40.909 0.00 0.00 0.00 5.19
112 113 4.977963 ACAAGCAAAAAGATCAACATGTCG 59.022 37.500 0.00 0.00 0.00 4.35
113 114 5.750067 ACACAAGCAAAAAGATCAACATGTC 59.250 36.000 0.00 0.00 0.00 3.06
114 115 5.663456 ACACAAGCAAAAAGATCAACATGT 58.337 33.333 0.00 0.00 0.00 3.21
115 116 6.592798 AACACAAGCAAAAAGATCAACATG 57.407 33.333 0.00 0.00 0.00 3.21
116 117 8.891671 ATAAACACAAGCAAAAAGATCAACAT 57.108 26.923 0.00 0.00 0.00 2.71
117 118 8.196771 AGATAAACACAAGCAAAAAGATCAACA 58.803 29.630 0.00 0.00 0.00 3.33
118 119 8.579682 AGATAAACACAAGCAAAAAGATCAAC 57.420 30.769 0.00 0.00 0.00 3.18
119 120 9.598517 AAAGATAAACACAAGCAAAAAGATCAA 57.401 25.926 0.00 0.00 0.00 2.57
120 121 9.598517 AAAAGATAAACACAAGCAAAAAGATCA 57.401 25.926 0.00 0.00 0.00 2.92
150 151 3.317150 CTTGCGTCTGTACTGATGTTCA 58.683 45.455 19.48 9.90 0.00 3.18
151 152 2.092838 GCTTGCGTCTGTACTGATGTTC 59.907 50.000 19.48 7.84 0.00 3.18
152 153 2.069273 GCTTGCGTCTGTACTGATGTT 58.931 47.619 19.48 0.00 0.00 2.71
153 154 1.714794 GCTTGCGTCTGTACTGATGT 58.285 50.000 19.48 0.00 0.00 3.06
154 155 0.642291 CGCTTGCGTCTGTACTGATG 59.358 55.000 15.57 15.57 0.00 3.07
155 156 1.078759 GCGCTTGCGTCTGTACTGAT 61.079 55.000 16.38 0.00 0.00 2.90
156 157 1.733041 GCGCTTGCGTCTGTACTGA 60.733 57.895 16.38 0.00 0.00 3.41
157 158 1.678269 GAGCGCTTGCGTCTGTACTG 61.678 60.000 13.26 0.00 45.69 2.74
158 159 1.444553 GAGCGCTTGCGTCTGTACT 60.445 57.895 13.26 3.73 45.69 2.73
159 160 1.078759 ATGAGCGCTTGCGTCTGTAC 61.079 55.000 13.26 0.00 45.69 2.90
160 161 0.454196 TATGAGCGCTTGCGTCTGTA 59.546 50.000 13.26 6.26 45.69 2.74
161 162 1.078759 GTATGAGCGCTTGCGTCTGT 61.079 55.000 13.26 7.66 45.69 3.41
162 163 1.078201 TGTATGAGCGCTTGCGTCTG 61.078 55.000 13.26 0.00 45.69 3.51
163 164 0.179100 ATGTATGAGCGCTTGCGTCT 60.179 50.000 13.26 13.17 45.69 4.18
164 165 1.190323 GTATGTATGAGCGCTTGCGTC 59.810 52.381 13.26 12.36 45.69 5.19
165 166 1.209128 GTATGTATGAGCGCTTGCGT 58.791 50.000 13.26 3.97 45.69 5.24
166 167 0.159554 CGTATGTATGAGCGCTTGCG 59.840 55.000 13.26 10.90 45.69 4.85
167 168 0.111089 GCGTATGTATGAGCGCTTGC 60.111 55.000 13.26 0.00 45.48 4.01
168 169 0.159554 CGCGTATGTATGAGCGCTTG 59.840 55.000 13.26 0.00 46.56 4.01
169 170 2.506544 CGCGTATGTATGAGCGCTT 58.493 52.632 13.26 0.00 46.56 4.68
170 171 4.228451 CGCGTATGTATGAGCGCT 57.772 55.556 11.27 11.27 46.56 5.92
173 174 2.090658 GTGTATGCGCGTATGTATGAGC 59.909 50.000 20.45 0.00 38.31 4.26
174 175 3.565516 AGTGTATGCGCGTATGTATGAG 58.434 45.455 20.45 0.00 0.00 2.90
175 176 3.003897 TGAGTGTATGCGCGTATGTATGA 59.996 43.478 20.45 0.00 0.00 2.15
176 177 3.119628 GTGAGTGTATGCGCGTATGTATG 59.880 47.826 20.45 0.00 0.00 2.39
177 178 3.305964 GTGAGTGTATGCGCGTATGTAT 58.694 45.455 20.45 2.87 0.00 2.29
178 179 2.542205 GGTGAGTGTATGCGCGTATGTA 60.542 50.000 20.45 5.53 0.00 2.29
179 180 1.556564 GTGAGTGTATGCGCGTATGT 58.443 50.000 20.45 0.00 0.00 2.29
180 181 0.852777 GGTGAGTGTATGCGCGTATG 59.147 55.000 20.45 0.00 0.00 2.39
181 182 0.744874 AGGTGAGTGTATGCGCGTAT 59.255 50.000 15.52 15.52 0.00 3.06
182 183 0.099968 GAGGTGAGTGTATGCGCGTA 59.900 55.000 8.43 4.92 0.00 4.42
183 184 1.153823 GAGGTGAGTGTATGCGCGT 60.154 57.895 8.43 7.55 0.00 6.01
184 185 0.380733 TAGAGGTGAGTGTATGCGCG 59.619 55.000 0.00 0.00 0.00 6.86
185 186 2.034685 TCATAGAGGTGAGTGTATGCGC 59.965 50.000 0.00 0.00 0.00 6.09
186 187 3.990318 TCATAGAGGTGAGTGTATGCG 57.010 47.619 0.00 0.00 0.00 4.73
187 188 4.450419 GCATTCATAGAGGTGAGTGTATGC 59.550 45.833 0.00 0.00 37.92 3.14
188 189 5.464722 GTGCATTCATAGAGGTGAGTGTATG 59.535 44.000 0.00 0.00 37.92 2.39
189 190 5.129320 TGTGCATTCATAGAGGTGAGTGTAT 59.871 40.000 0.00 0.00 37.92 2.29
190 191 4.466015 TGTGCATTCATAGAGGTGAGTGTA 59.534 41.667 0.00 0.00 37.92 2.90
191 192 3.261643 TGTGCATTCATAGAGGTGAGTGT 59.738 43.478 0.00 0.00 37.92 3.55
192 193 3.620374 GTGTGCATTCATAGAGGTGAGTG 59.380 47.826 0.00 0.00 38.45 3.51
193 194 3.261643 TGTGTGCATTCATAGAGGTGAGT 59.738 43.478 0.00 0.00 0.00 3.41
194 195 3.620374 GTGTGTGCATTCATAGAGGTGAG 59.380 47.826 0.00 0.00 0.00 3.51
195 196 3.599343 GTGTGTGCATTCATAGAGGTGA 58.401 45.455 0.00 0.00 0.00 4.02
196 197 2.349580 CGTGTGTGCATTCATAGAGGTG 59.650 50.000 0.00 0.00 0.00 4.00
197 198 2.621338 CGTGTGTGCATTCATAGAGGT 58.379 47.619 0.00 0.00 0.00 3.85
198 199 1.328680 GCGTGTGTGCATTCATAGAGG 59.671 52.381 0.00 0.00 34.15 3.69
199 200 2.001872 TGCGTGTGTGCATTCATAGAG 58.998 47.619 0.00 0.00 40.62 2.43
200 201 2.091852 TGCGTGTGTGCATTCATAGA 57.908 45.000 0.00 0.00 40.62 1.98
209 210 1.087771 GGTAGGGTATGCGTGTGTGC 61.088 60.000 0.00 0.00 0.00 4.57
210 211 0.461339 GGGTAGGGTATGCGTGTGTG 60.461 60.000 0.00 0.00 0.00 3.82
211 212 1.619807 GGGGTAGGGTATGCGTGTGT 61.620 60.000 0.00 0.00 0.00 3.72
212 213 1.145377 GGGGTAGGGTATGCGTGTG 59.855 63.158 0.00 0.00 0.00 3.82
213 214 0.262580 TAGGGGTAGGGTATGCGTGT 59.737 55.000 0.00 0.00 0.00 4.49
214 215 1.640917 ATAGGGGTAGGGTATGCGTG 58.359 55.000 0.00 0.00 0.00 5.34
215 216 3.438183 CTTATAGGGGTAGGGTATGCGT 58.562 50.000 0.00 0.00 0.00 5.24
216 217 2.167900 GCTTATAGGGGTAGGGTATGCG 59.832 54.545 0.00 0.00 0.00 4.73
217 218 3.055312 GTGCTTATAGGGGTAGGGTATGC 60.055 52.174 0.00 0.00 0.00 3.14
218 219 3.518303 GGTGCTTATAGGGGTAGGGTATG 59.482 52.174 0.00 0.00 0.00 2.39
219 220 3.408586 AGGTGCTTATAGGGGTAGGGTAT 59.591 47.826 0.00 0.00 0.00 2.73
220 221 2.799576 AGGTGCTTATAGGGGTAGGGTA 59.200 50.000 0.00 0.00 0.00 3.69
221 222 1.584105 AGGTGCTTATAGGGGTAGGGT 59.416 52.381 0.00 0.00 0.00 4.34
222 223 2.417719 AGGTGCTTATAGGGGTAGGG 57.582 55.000 0.00 0.00 0.00 3.53
223 224 3.314693 TGAAGGTGCTTATAGGGGTAGG 58.685 50.000 0.00 0.00 0.00 3.18
224 225 4.593206 TCATGAAGGTGCTTATAGGGGTAG 59.407 45.833 0.00 0.00 0.00 3.18
225 226 4.562767 TCATGAAGGTGCTTATAGGGGTA 58.437 43.478 0.00 0.00 0.00 3.69
226 227 3.392616 CTCATGAAGGTGCTTATAGGGGT 59.607 47.826 0.00 0.00 0.00 4.95
227 228 3.648067 TCTCATGAAGGTGCTTATAGGGG 59.352 47.826 0.00 0.00 0.00 4.79
228 229 4.346418 AGTCTCATGAAGGTGCTTATAGGG 59.654 45.833 0.00 0.00 0.00 3.53
229 230 5.069648 TCAGTCTCATGAAGGTGCTTATAGG 59.930 44.000 0.00 0.00 0.00 2.57
230 231 6.154203 TCAGTCTCATGAAGGTGCTTATAG 57.846 41.667 0.00 0.00 0.00 1.31
231 232 5.452496 GCTCAGTCTCATGAAGGTGCTTATA 60.452 44.000 0.00 0.00 0.00 0.98
232 233 4.682859 GCTCAGTCTCATGAAGGTGCTTAT 60.683 45.833 0.00 0.00 0.00 1.73
233 234 3.368843 GCTCAGTCTCATGAAGGTGCTTA 60.369 47.826 0.00 0.00 0.00 3.09
234 235 2.614987 GCTCAGTCTCATGAAGGTGCTT 60.615 50.000 0.00 0.00 0.00 3.91
235 236 1.066286 GCTCAGTCTCATGAAGGTGCT 60.066 52.381 0.00 0.00 0.00 4.40
236 237 1.367659 GCTCAGTCTCATGAAGGTGC 58.632 55.000 0.00 0.00 0.00 5.01
237 238 1.738365 CGGCTCAGTCTCATGAAGGTG 60.738 57.143 0.00 0.00 0.00 4.00
238 239 0.534412 CGGCTCAGTCTCATGAAGGT 59.466 55.000 0.00 0.00 0.00 3.50
239 240 0.179089 CCGGCTCAGTCTCATGAAGG 60.179 60.000 0.00 0.00 0.00 3.46
240 241 0.809241 GCCGGCTCAGTCTCATGAAG 60.809 60.000 22.15 0.00 0.00 3.02
241 242 1.219124 GCCGGCTCAGTCTCATGAA 59.781 57.895 22.15 0.00 0.00 2.57
242 243 1.332889 ATGCCGGCTCAGTCTCATGA 61.333 55.000 29.70 1.81 0.00 3.07
243 244 1.145598 ATGCCGGCTCAGTCTCATG 59.854 57.895 29.70 0.00 0.00 3.07
244 245 1.145598 CATGCCGGCTCAGTCTCAT 59.854 57.895 29.70 6.94 0.00 2.90
245 246 2.230994 GACATGCCGGCTCAGTCTCA 62.231 60.000 29.70 4.25 0.00 3.27
246 247 1.520342 GACATGCCGGCTCAGTCTC 60.520 63.158 29.70 9.51 0.00 3.36
247 248 1.620739 ATGACATGCCGGCTCAGTCT 61.621 55.000 31.39 20.84 0.00 3.24
248 249 1.153289 ATGACATGCCGGCTCAGTC 60.153 57.895 29.70 28.59 0.00 3.51
249 250 1.153289 GATGACATGCCGGCTCAGT 60.153 57.895 29.70 22.43 0.00 3.41
250 251 0.463295 AAGATGACATGCCGGCTCAG 60.463 55.000 29.70 19.20 0.00 3.35
251 252 0.745486 CAAGATGACATGCCGGCTCA 60.745 55.000 29.70 23.34 0.00 4.26
252 253 0.462581 TCAAGATGACATGCCGGCTC 60.463 55.000 29.70 17.89 0.00 4.70
253 254 0.035152 TTCAAGATGACATGCCGGCT 60.035 50.000 29.70 7.33 0.00 5.52
254 255 0.810648 TTTCAAGATGACATGCCGGC 59.189 50.000 22.73 22.73 0.00 6.13
255 256 3.788333 AATTTCAAGATGACATGCCGG 57.212 42.857 0.00 0.00 0.00 6.13
256 257 4.730042 CGTAAATTTCAAGATGACATGCCG 59.270 41.667 0.00 0.00 0.00 5.69
257 258 5.879237 TCGTAAATTTCAAGATGACATGCC 58.121 37.500 0.00 0.00 0.00 4.40
258 259 7.023575 ACTTCGTAAATTTCAAGATGACATGC 58.976 34.615 0.00 0.00 0.00 4.06
259 260 8.229811 TGACTTCGTAAATTTCAAGATGACATG 58.770 33.333 0.00 0.00 0.00 3.21
260 261 8.230486 GTGACTTCGTAAATTTCAAGATGACAT 58.770 33.333 0.00 0.00 0.00 3.06
261 262 7.307751 GGTGACTTCGTAAATTTCAAGATGACA 60.308 37.037 0.00 0.26 0.00 3.58
262 263 7.015877 GGTGACTTCGTAAATTTCAAGATGAC 58.984 38.462 0.00 0.00 0.00 3.06
263 264 6.128661 CGGTGACTTCGTAAATTTCAAGATGA 60.129 38.462 0.00 0.00 0.00 2.92
264 265 6.015504 CGGTGACTTCGTAAATTTCAAGATG 58.984 40.000 0.00 0.00 0.00 2.90
265 266 5.929992 TCGGTGACTTCGTAAATTTCAAGAT 59.070 36.000 0.00 0.00 0.00 2.40
266 267 5.291178 TCGGTGACTTCGTAAATTTCAAGA 58.709 37.500 0.00 0.00 0.00 3.02
267 268 5.585500 TCGGTGACTTCGTAAATTTCAAG 57.415 39.130 0.00 0.00 0.00 3.02
268 269 5.049954 CCTTCGGTGACTTCGTAAATTTCAA 60.050 40.000 0.00 0.00 0.00 2.69
269 270 4.449743 CCTTCGGTGACTTCGTAAATTTCA 59.550 41.667 0.00 0.00 0.00 2.69
270 271 4.668431 GCCTTCGGTGACTTCGTAAATTTC 60.668 45.833 0.00 0.00 0.00 2.17
271 272 3.187842 GCCTTCGGTGACTTCGTAAATTT 59.812 43.478 0.00 0.00 0.00 1.82
272 273 2.740447 GCCTTCGGTGACTTCGTAAATT 59.260 45.455 0.00 0.00 0.00 1.82
273 274 2.289195 TGCCTTCGGTGACTTCGTAAAT 60.289 45.455 0.00 0.00 0.00 1.40
274 275 1.068895 TGCCTTCGGTGACTTCGTAAA 59.931 47.619 0.00 0.00 0.00 2.01
275 276 0.675083 TGCCTTCGGTGACTTCGTAA 59.325 50.000 0.00 0.00 0.00 3.18
276 277 0.038892 GTGCCTTCGGTGACTTCGTA 60.039 55.000 0.00 0.00 0.00 3.43
277 278 1.300697 GTGCCTTCGGTGACTTCGT 60.301 57.895 0.00 0.00 0.00 3.85
278 279 2.027625 GGTGCCTTCGGTGACTTCG 61.028 63.158 0.00 0.00 0.00 3.79
279 280 0.670854 GAGGTGCCTTCGGTGACTTC 60.671 60.000 0.00 0.00 0.00 3.01
280 281 1.371558 GAGGTGCCTTCGGTGACTT 59.628 57.895 0.00 0.00 0.00 3.01
281 282 2.932234 CGAGGTGCCTTCGGTGACT 61.932 63.158 0.00 0.00 0.00 3.41
282 283 2.432628 CGAGGTGCCTTCGGTGAC 60.433 66.667 0.00 0.00 0.00 3.67
283 284 2.915659 ACGAGGTGCCTTCGGTGA 60.916 61.111 10.49 0.00 0.00 4.02
284 285 2.432628 GACGAGGTGCCTTCGGTG 60.433 66.667 10.49 0.00 0.00 4.94
285 286 4.052229 CGACGAGGTGCCTTCGGT 62.052 66.667 10.49 3.62 0.00 4.69
286 287 3.966026 GACGACGAGGTGCCTTCGG 62.966 68.421 14.45 1.60 32.48 4.30
287 288 2.504244 GACGACGAGGTGCCTTCG 60.504 66.667 0.00 9.90 33.87 3.79
288 289 2.504244 CGACGACGAGGTGCCTTC 60.504 66.667 0.00 0.00 42.66 3.46
289 290 2.981909 TCGACGACGAGGTGCCTT 60.982 61.111 5.75 0.00 43.81 4.35
311 312 2.994578 GCTTTTAGTGGAAGGAGACGTC 59.005 50.000 7.70 7.70 38.20 4.34
312 313 2.609737 CGCTTTTAGTGGAAGGAGACGT 60.610 50.000 0.00 0.00 0.00 4.34
313 314 1.993370 CGCTTTTAGTGGAAGGAGACG 59.007 52.381 0.00 0.00 0.00 4.18
314 315 1.732809 GCGCTTTTAGTGGAAGGAGAC 59.267 52.381 0.00 0.00 0.00 3.36
315 316 1.346395 TGCGCTTTTAGTGGAAGGAGA 59.654 47.619 9.73 0.00 0.00 3.71
316 317 1.808411 TGCGCTTTTAGTGGAAGGAG 58.192 50.000 9.73 0.00 0.00 3.69
317 318 2.356135 GATGCGCTTTTAGTGGAAGGA 58.644 47.619 9.73 0.00 27.73 3.36
318 319 1.062587 CGATGCGCTTTTAGTGGAAGG 59.937 52.381 9.73 0.00 27.73 3.46
319 320 2.442189 CGATGCGCTTTTAGTGGAAG 57.558 50.000 9.73 0.00 27.73 3.46
332 333 3.673746 TTAAGAATTTCAGGCGATGCG 57.326 42.857 0.00 0.00 0.00 4.73
333 334 7.985634 TTTATTTAAGAATTTCAGGCGATGC 57.014 32.000 0.00 0.00 0.00 3.91
334 335 9.956720 AGATTTATTTAAGAATTTCAGGCGATG 57.043 29.630 0.00 0.00 0.00 3.84
337 338 9.884465 CCTAGATTTATTTAAGAATTTCAGGCG 57.116 33.333 0.00 0.00 0.00 5.52
350 351 9.719355 TGCTCGCATTATTCCTAGATTTATTTA 57.281 29.630 0.00 0.00 0.00 1.40
351 352 8.507249 GTGCTCGCATTATTCCTAGATTTATTT 58.493 33.333 0.00 0.00 0.00 1.40
352 353 7.119846 GGTGCTCGCATTATTCCTAGATTTATT 59.880 37.037 0.00 0.00 0.00 1.40
353 354 6.595716 GGTGCTCGCATTATTCCTAGATTTAT 59.404 38.462 0.00 0.00 0.00 1.40
354 355 5.932303 GGTGCTCGCATTATTCCTAGATTTA 59.068 40.000 0.00 0.00 0.00 1.40
355 356 4.757149 GGTGCTCGCATTATTCCTAGATTT 59.243 41.667 0.00 0.00 0.00 2.17
356 357 4.202357 TGGTGCTCGCATTATTCCTAGATT 60.202 41.667 0.00 0.00 0.00 2.40
357 358 3.324846 TGGTGCTCGCATTATTCCTAGAT 59.675 43.478 0.00 0.00 0.00 1.98
358 359 2.698274 TGGTGCTCGCATTATTCCTAGA 59.302 45.455 0.00 0.00 0.00 2.43
359 360 3.062763 CTGGTGCTCGCATTATTCCTAG 58.937 50.000 0.00 0.00 0.00 3.02
360 361 2.224281 CCTGGTGCTCGCATTATTCCTA 60.224 50.000 0.00 0.00 0.00 2.94
361 362 1.475751 CCTGGTGCTCGCATTATTCCT 60.476 52.381 0.00 0.00 0.00 3.36
362 363 0.947244 CCTGGTGCTCGCATTATTCC 59.053 55.000 0.00 0.00 0.00 3.01
363 364 1.953559 TCCTGGTGCTCGCATTATTC 58.046 50.000 0.00 0.00 0.00 1.75
364 365 2.645838 ATCCTGGTGCTCGCATTATT 57.354 45.000 0.00 0.00 0.00 1.40
365 366 2.620115 CAAATCCTGGTGCTCGCATTAT 59.380 45.455 0.00 0.00 0.00 1.28
366 367 2.016318 CAAATCCTGGTGCTCGCATTA 58.984 47.619 0.00 0.00 0.00 1.90
367 368 0.813184 CAAATCCTGGTGCTCGCATT 59.187 50.000 0.00 0.00 0.00 3.56
368 369 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.000 0.00 0.00 0.00 4.73
369 370 0.250684 TTCAAATCCTGGTGCTCGCA 60.251 50.000 0.00 0.00 0.00 5.10
370 371 0.169009 GTTCAAATCCTGGTGCTCGC 59.831 55.000 0.00 0.00 0.00 5.03
371 372 0.804989 GGTTCAAATCCTGGTGCTCG 59.195 55.000 0.00 0.00 0.00 5.03
372 373 1.177401 GGGTTCAAATCCTGGTGCTC 58.823 55.000 0.00 0.00 0.00 4.26
373 374 0.779997 AGGGTTCAAATCCTGGTGCT 59.220 50.000 0.00 0.00 38.36 4.40
374 375 3.363787 AGGGTTCAAATCCTGGTGC 57.636 52.632 0.00 0.00 38.36 5.01
390 391 2.368192 TATCCCCAGCCCACCAGG 60.368 66.667 0.00 0.00 39.47 4.45
391 392 2.757124 GGTATCCCCAGCCCACCAG 61.757 68.421 0.00 0.00 0.00 4.00
392 393 2.694616 GGTATCCCCAGCCCACCA 60.695 66.667 0.00 0.00 0.00 4.17
393 394 2.694616 TGGTATCCCCAGCCCACC 60.695 66.667 0.00 0.00 38.72 4.61
394 395 1.984288 GAGTGGTATCCCCAGCCCAC 61.984 65.000 0.00 0.00 46.45 4.61
395 396 1.692749 GAGTGGTATCCCCAGCCCA 60.693 63.158 0.00 0.00 46.45 5.36
396 397 1.384643 AGAGTGGTATCCCCAGCCC 60.385 63.158 0.00 0.00 46.45 5.19
397 398 1.411651 GGAGAGTGGTATCCCCAGCC 61.412 65.000 0.00 0.00 46.45 4.85
398 399 2.137692 GGAGAGTGGTATCCCCAGC 58.862 63.158 0.00 0.00 46.45 4.85
403 404 3.232662 GGTTAGAGGGAGAGTGGTATCC 58.767 54.545 0.00 0.00 32.72 2.59
404 405 3.912248 TGGTTAGAGGGAGAGTGGTATC 58.088 50.000 0.00 0.00 0.00 2.24
405 406 4.484912 GATGGTTAGAGGGAGAGTGGTAT 58.515 47.826 0.00 0.00 0.00 2.73
406 407 3.373877 GGATGGTTAGAGGGAGAGTGGTA 60.374 52.174 0.00 0.00 0.00 3.25
407 408 2.627217 GGATGGTTAGAGGGAGAGTGGT 60.627 54.545 0.00 0.00 0.00 4.16
408 409 2.043227 GGATGGTTAGAGGGAGAGTGG 58.957 57.143 0.00 0.00 0.00 4.00
409 410 2.752030 TGGATGGTTAGAGGGAGAGTG 58.248 52.381 0.00 0.00 0.00 3.51
410 411 3.108376 GTTGGATGGTTAGAGGGAGAGT 58.892 50.000 0.00 0.00 0.00 3.24
411 412 2.436173 GGTTGGATGGTTAGAGGGAGAG 59.564 54.545 0.00 0.00 0.00 3.20
412 413 2.225779 TGGTTGGATGGTTAGAGGGAGA 60.226 50.000 0.00 0.00 0.00 3.71
413 414 2.092914 GTGGTTGGATGGTTAGAGGGAG 60.093 54.545 0.00 0.00 0.00 4.30
414 415 1.913419 GTGGTTGGATGGTTAGAGGGA 59.087 52.381 0.00 0.00 0.00 4.20
415 416 1.633432 TGTGGTTGGATGGTTAGAGGG 59.367 52.381 0.00 0.00 0.00 4.30
416 417 2.356125 CCTGTGGTTGGATGGTTAGAGG 60.356 54.545 0.00 0.00 0.00 3.69
417 418 2.305927 ACCTGTGGTTGGATGGTTAGAG 59.694 50.000 0.00 0.00 27.29 2.43
418 419 2.344592 ACCTGTGGTTGGATGGTTAGA 58.655 47.619 0.00 0.00 27.29 2.10
419 420 2.879103 ACCTGTGGTTGGATGGTTAG 57.121 50.000 0.00 0.00 27.29 2.34
432 433 1.008538 GCAAGCGAACCAACCTGTG 60.009 57.895 0.00 0.00 0.00 3.66
433 434 0.751643 AAGCAAGCGAACCAACCTGT 60.752 50.000 0.00 0.00 0.00 4.00
434 435 0.318107 CAAGCAAGCGAACCAACCTG 60.318 55.000 0.00 0.00 0.00 4.00
435 436 0.465460 TCAAGCAAGCGAACCAACCT 60.465 50.000 0.00 0.00 0.00 3.50
436 437 0.598065 ATCAAGCAAGCGAACCAACC 59.402 50.000 0.00 0.00 0.00 3.77
437 438 1.266718 TGATCAAGCAAGCGAACCAAC 59.733 47.619 0.00 0.00 0.00 3.77
438 439 1.603456 TGATCAAGCAAGCGAACCAA 58.397 45.000 0.00 0.00 0.00 3.67
439 440 1.266718 GTTGATCAAGCAAGCGAACCA 59.733 47.619 8.80 0.00 0.00 3.67
440 441 1.537202 AGTTGATCAAGCAAGCGAACC 59.463 47.619 8.80 0.00 0.00 3.62
441 442 2.413371 GGAGTTGATCAAGCAAGCGAAC 60.413 50.000 8.80 0.00 0.00 3.95
442 443 1.806542 GGAGTTGATCAAGCAAGCGAA 59.193 47.619 8.80 0.00 0.00 4.70
443 444 1.002430 AGGAGTTGATCAAGCAAGCGA 59.998 47.619 8.80 0.00 0.00 4.93
444 445 1.446907 AGGAGTTGATCAAGCAAGCG 58.553 50.000 8.80 0.00 0.00 4.68
445 446 2.941720 CCTAGGAGTTGATCAAGCAAGC 59.058 50.000 8.80 0.00 0.00 4.01
446 447 2.941720 GCCTAGGAGTTGATCAAGCAAG 59.058 50.000 14.75 5.79 0.00 4.01
447 448 2.305635 TGCCTAGGAGTTGATCAAGCAA 59.694 45.455 14.75 0.00 0.00 3.91
448 449 1.908619 TGCCTAGGAGTTGATCAAGCA 59.091 47.619 14.75 10.17 0.00 3.91
449 450 2.698855 TGCCTAGGAGTTGATCAAGC 57.301 50.000 14.75 7.50 0.00 4.01
450 451 2.941720 GCTTGCCTAGGAGTTGATCAAG 59.058 50.000 14.75 14.95 34.32 3.02
451 452 2.305635 TGCTTGCCTAGGAGTTGATCAA 59.694 45.455 14.75 3.38 0.00 2.57
452 453 1.908619 TGCTTGCCTAGGAGTTGATCA 59.091 47.619 14.75 0.00 0.00 2.92
459 460 1.781786 TAGGTCTGCTTGCCTAGGAG 58.218 55.000 14.75 2.50 43.23 3.69
495 496 3.088532 GGAGCCATGTTCATTGTTACCA 58.911 45.455 0.00 0.00 0.00 3.25
508 509 3.191078 CTCACTAAAGAGGGAGCCATG 57.809 52.381 0.00 0.00 46.20 3.66
536 537 2.529780 TTTGGTTCAGGCATTTGCTG 57.470 45.000 2.12 0.00 41.70 4.41
739 775 6.062095 AGCTTGTGACTGGTAGTAAAACATT 58.938 36.000 0.00 0.00 0.00 2.71
935 972 3.815856 TGCAAGTTTGAAAGATTGCCA 57.184 38.095 19.17 9.21 45.76 4.92
1068 1105 6.681729 TGTAAAGTCTCTATTCCTTGGTGT 57.318 37.500 0.00 0.00 0.00 4.16
1603 1643 5.356470 GCTCAGTCTATCTGGAATGCTTTTT 59.644 40.000 0.00 0.00 43.76 1.94
1631 1671 5.457487 GGGGAATCCAAATGAAACCCTTTTT 60.457 40.000 0.09 0.00 40.26 1.94
1740 1782 1.463056 TGTGCTAAGTAATGTGCGTGC 59.537 47.619 0.00 0.00 0.00 5.34
1742 1784 3.399330 AGTTGTGCTAAGTAATGTGCGT 58.601 40.909 0.00 0.00 0.00 5.24
2064 2114 2.930826 AATCCTCGTGTCACCAGTTT 57.069 45.000 0.00 0.00 0.00 2.66
2114 2164 5.415701 GGATGATGCACAAGAAAAGGTTAGA 59.584 40.000 0.00 0.00 0.00 2.10
2115 2165 5.416952 AGGATGATGCACAAGAAAAGGTTAG 59.583 40.000 0.00 0.00 0.00 2.34
2116 2166 5.324409 AGGATGATGCACAAGAAAAGGTTA 58.676 37.500 0.00 0.00 0.00 2.85
2117 2167 4.154942 AGGATGATGCACAAGAAAAGGTT 58.845 39.130 0.00 0.00 0.00 3.50
2118 2168 3.771216 AGGATGATGCACAAGAAAAGGT 58.229 40.909 0.00 0.00 0.00 3.50
2119 2169 4.946157 ACTAGGATGATGCACAAGAAAAGG 59.054 41.667 0.00 0.00 0.00 3.11
2120 2170 7.044181 TCTACTAGGATGATGCACAAGAAAAG 58.956 38.462 0.00 0.00 0.00 2.27
2121 2171 6.946340 TCTACTAGGATGATGCACAAGAAAA 58.054 36.000 0.00 0.00 0.00 2.29
2122 2172 6.155221 ACTCTACTAGGATGATGCACAAGAAA 59.845 38.462 0.00 0.00 0.00 2.52
2123 2173 5.658634 ACTCTACTAGGATGATGCACAAGAA 59.341 40.000 0.00 0.00 0.00 2.52
2124 2174 5.204292 ACTCTACTAGGATGATGCACAAGA 58.796 41.667 0.00 0.00 0.00 3.02
2125 2175 5.528043 ACTCTACTAGGATGATGCACAAG 57.472 43.478 0.00 0.00 0.00 3.16
2126 2176 7.603180 AATACTCTACTAGGATGATGCACAA 57.397 36.000 0.00 0.00 0.00 3.33
2127 2177 7.069950 ACAAATACTCTACTAGGATGATGCACA 59.930 37.037 0.00 0.00 0.00 4.57
2128 2178 7.437748 ACAAATACTCTACTAGGATGATGCAC 58.562 38.462 0.00 0.00 0.00 4.57
2129 2179 7.603180 ACAAATACTCTACTAGGATGATGCA 57.397 36.000 0.00 0.00 0.00 3.96
2130 2180 9.796120 GATACAAATACTCTACTAGGATGATGC 57.204 37.037 0.00 0.00 0.00 3.91
2269 2319 3.625649 AGAGCAGAGGACTGAAAATCC 57.374 47.619 0.00 0.00 46.03 3.01
2270 2320 4.081420 TGGTAGAGCAGAGGACTGAAAATC 60.081 45.833 0.00 0.00 46.03 2.17
2271 2321 3.840666 TGGTAGAGCAGAGGACTGAAAAT 59.159 43.478 0.00 0.00 46.03 1.82
2272 2322 3.239449 TGGTAGAGCAGAGGACTGAAAA 58.761 45.455 0.00 0.00 46.03 2.29
2273 2323 2.889512 TGGTAGAGCAGAGGACTGAAA 58.110 47.619 0.00 0.00 46.03 2.69
2274 2324 2.563179 GTTGGTAGAGCAGAGGACTGAA 59.437 50.000 0.00 0.00 46.03 3.02
2275 2325 2.171840 GTTGGTAGAGCAGAGGACTGA 58.828 52.381 0.00 0.00 46.03 3.41
2276 2326 2.094286 CAGTTGGTAGAGCAGAGGACTG 60.094 54.545 0.00 0.00 45.91 3.51
2277 2327 2.175202 CAGTTGGTAGAGCAGAGGACT 58.825 52.381 0.00 0.00 0.00 3.85
2278 2328 2.165437 CTCAGTTGGTAGAGCAGAGGAC 59.835 54.545 0.00 0.00 0.00 3.85
2279 2329 2.451490 CTCAGTTGGTAGAGCAGAGGA 58.549 52.381 0.00 0.00 0.00 3.71
2280 2330 2.957491 CTCAGTTGGTAGAGCAGAGG 57.043 55.000 0.00 0.00 0.00 3.69
2286 2336 4.037446 GTCAGGATAGCTCAGTTGGTAGAG 59.963 50.000 0.00 0.00 35.01 2.43
2287 2337 3.954904 GTCAGGATAGCTCAGTTGGTAGA 59.045 47.826 0.00 0.00 0.00 2.59
2288 2338 3.068873 GGTCAGGATAGCTCAGTTGGTAG 59.931 52.174 0.00 0.00 0.00 3.18
2289 2339 3.031736 GGTCAGGATAGCTCAGTTGGTA 58.968 50.000 0.00 0.00 0.00 3.25
2290 2340 1.834263 GGTCAGGATAGCTCAGTTGGT 59.166 52.381 0.00 0.00 0.00 3.67
2291 2341 2.114616 AGGTCAGGATAGCTCAGTTGG 58.885 52.381 0.00 0.00 0.00 3.77
2292 2342 3.902881 AAGGTCAGGATAGCTCAGTTG 57.097 47.619 0.00 0.00 0.00 3.16
2293 2343 4.534103 AGAAAAGGTCAGGATAGCTCAGTT 59.466 41.667 0.00 0.00 0.00 3.16
2294 2344 4.100373 AGAAAAGGTCAGGATAGCTCAGT 58.900 43.478 0.00 0.00 0.00 3.41
2295 2345 4.751767 AGAAAAGGTCAGGATAGCTCAG 57.248 45.455 0.00 0.00 0.00 3.35
2296 2346 4.287067 ACAAGAAAAGGTCAGGATAGCTCA 59.713 41.667 0.00 0.00 0.00 4.26
2297 2347 4.633565 CACAAGAAAAGGTCAGGATAGCTC 59.366 45.833 0.00 0.00 0.00 4.09
2298 2348 4.583871 CACAAGAAAAGGTCAGGATAGCT 58.416 43.478 0.00 0.00 0.00 3.32
2299 2349 3.127721 GCACAAGAAAAGGTCAGGATAGC 59.872 47.826 0.00 0.00 0.00 2.97
2300 2350 4.326826 TGCACAAGAAAAGGTCAGGATAG 58.673 43.478 0.00 0.00 0.00 2.08
2301 2351 4.365514 TGCACAAGAAAAGGTCAGGATA 57.634 40.909 0.00 0.00 0.00 2.59
2302 2352 3.228188 TGCACAAGAAAAGGTCAGGAT 57.772 42.857 0.00 0.00 0.00 3.24
2303 2353 2.727123 TGCACAAGAAAAGGTCAGGA 57.273 45.000 0.00 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.