Multiple sequence alignment - TraesCS4A01G112300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G112300 chr4A 100.000 3907 0 0 1 3907 136929934 136926028 0.000000e+00 7215.0
1 TraesCS4A01G112300 chr4A 81.287 342 58 4 2212 2552 137178575 137178239 4.970000e-69 272.0
2 TraesCS4A01G112300 chr4A 92.800 125 8 1 1971 2095 137168543 137168420 3.100000e-41 180.0
3 TraesCS4A01G112300 chr4A 84.066 182 19 4 1971 2152 137178956 137178785 2.410000e-37 167.0
4 TraesCS4A01G112300 chr4A 76.677 313 57 13 1630 1940 137168942 137168644 4.040000e-35 159.0
5 TraesCS4A01G112300 chr4A 89.256 121 10 3 1971 2090 137175145 137175027 8.750000e-32 148.0
6 TraesCS4A01G112300 chr4D 87.476 1557 99 24 1592 3065 336117831 336119374 0.000000e+00 1707.0
7 TraesCS4A01G112300 chr4D 89.581 979 79 16 1 960 300652979 300653953 0.000000e+00 1221.0
8 TraesCS4A01G112300 chr4D 89.318 983 78 16 1 960 278156211 278155233 0.000000e+00 1208.0
9 TraesCS4A01G112300 chr4D 92.073 328 22 2 1218 1541 336117504 336117831 3.560000e-125 459.0
10 TraesCS4A01G112300 chr4D 92.308 247 12 5 3282 3521 336131821 336132067 1.040000e-90 344.0
11 TraesCS4A01G112300 chr4D 86.447 273 35 2 956 1226 336116924 336117196 8.210000e-77 298.0
12 TraesCS4A01G112300 chr4D 81.287 342 58 4 2212 2552 335781551 335781887 4.970000e-69 272.0
13 TraesCS4A01G112300 chr4D 85.088 228 16 7 3083 3293 336131576 336131802 2.360000e-52 217.0
14 TraesCS4A01G112300 chr4D 77.636 313 55 14 1635 1940 335893219 335893523 4.010000e-40 176.0
15 TraesCS4A01G112300 chr4D 91.379 116 10 0 1971 2086 335893623 335893738 4.040000e-35 159.0
16 TraesCS4A01G112300 chr4D 83.616 177 19 4 1973 2149 335781030 335781196 1.450000e-34 158.0
17 TraesCS4A01G112300 chr4B 90.597 1106 76 15 1971 3065 414188092 414189180 0.000000e+00 1441.0
18 TraesCS4A01G112300 chr4B 83.488 969 122 27 4 949 56973625 56972672 0.000000e+00 869.0
19 TraesCS4A01G112300 chr4B 88.226 620 46 11 1346 1940 414187372 414187989 0.000000e+00 715.0
20 TraesCS4A01G112300 chr4B 89.308 318 18 7 3215 3521 414190435 414190747 6.120000e-103 385.0
21 TraesCS4A01G112300 chr4B 77.576 330 55 17 1623 1940 413871134 413871456 8.620000e-42 182.0
22 TraesCS4A01G112300 chr4B 97.030 101 3 0 1986 2086 413871576 413871676 1.870000e-38 171.0
23 TraesCS4A01G112300 chr4B 88.652 141 11 2 1969 2104 413860087 413860227 2.410000e-37 167.0
24 TraesCS4A01G112300 chr5D 89.773 968 73 13 1 945 479640829 479639865 0.000000e+00 1216.0
25 TraesCS4A01G112300 chr5D 85.992 978 107 23 1 960 320923145 320924110 0.000000e+00 1020.0
26 TraesCS4A01G112300 chr5D 83.418 983 113 37 1 961 436576272 436577226 0.000000e+00 867.0
27 TraesCS4A01G112300 chr5D 95.337 386 17 1 3523 3907 506105561 506105946 2.580000e-171 612.0
28 TraesCS4A01G112300 chr7D 88.302 966 89 17 1 949 363601938 363600980 0.000000e+00 1136.0
29 TraesCS4A01G112300 chr7D 95.596 386 16 1 3523 3907 139853317 139853702 5.550000e-173 617.0
30 TraesCS4A01G112300 chr6A 87.967 964 89 18 1 949 59100393 59099442 0.000000e+00 1112.0
31 TraesCS4A01G112300 chr6A 87.054 981 96 24 1 961 113523933 113522964 0.000000e+00 1079.0
32 TraesCS4A01G112300 chr6A 95.337 386 17 1 3523 3907 430564425 430564040 2.580000e-171 612.0
33 TraesCS4A01G112300 chr6D 85.204 980 111 26 1 962 59651027 59650064 0.000000e+00 976.0
34 TraesCS4A01G112300 chr6D 87.532 385 40 5 1 377 126653486 126653870 4.630000e-119 438.0
35 TraesCS4A01G112300 chr1A 84.892 973 103 33 1 946 362431733 362430778 0.000000e+00 942.0
36 TraesCS4A01G112300 chr1D 96.373 386 13 1 3523 3907 188325572 188325187 5.510000e-178 634.0
37 TraesCS4A01G112300 chr1D 95.855 386 15 1 3523 3907 188331193 188330808 1.190000e-174 623.0
38 TraesCS4A01G112300 chr1D 95.596 386 16 1 3523 3907 410645475 410645090 5.550000e-173 617.0
39 TraesCS4A01G112300 chr1D 95.584 385 16 1 3524 3907 188336812 188336428 1.990000e-172 616.0
40 TraesCS4A01G112300 chr5A 96.114 386 14 1 3523 3907 482938458 482938843 2.560000e-176 628.0
41 TraesCS4A01G112300 chr2A 95.596 386 16 1 3523 3907 412439029 412439414 5.550000e-173 617.0
42 TraesCS4A01G112300 chr2D 97.872 47 1 0 1058 1104 648280517 648280471 9.000000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G112300 chr4A 136926028 136929934 3906 True 7215.000000 7215 100.000000 1 3907 1 chr4A.!!$R1 3906
1 TraesCS4A01G112300 chr4D 300652979 300653953 974 False 1221.000000 1221 89.581000 1 960 1 chr4D.!!$F1 959
2 TraesCS4A01G112300 chr4D 278155233 278156211 978 True 1208.000000 1208 89.318000 1 960 1 chr4D.!!$R1 959
3 TraesCS4A01G112300 chr4D 336116924 336119374 2450 False 821.333333 1707 88.665333 956 3065 3 chr4D.!!$F4 2109
4 TraesCS4A01G112300 chr4D 335781030 335781887 857 False 215.000000 272 82.451500 1973 2552 2 chr4D.!!$F2 579
5 TraesCS4A01G112300 chr4B 56972672 56973625 953 True 869.000000 869 83.488000 4 949 1 chr4B.!!$R1 945
6 TraesCS4A01G112300 chr4B 414187372 414190747 3375 False 847.000000 1441 89.377000 1346 3521 3 chr4B.!!$F3 2175
7 TraesCS4A01G112300 chr5D 479639865 479640829 964 True 1216.000000 1216 89.773000 1 945 1 chr5D.!!$R1 944
8 TraesCS4A01G112300 chr5D 320923145 320924110 965 False 1020.000000 1020 85.992000 1 960 1 chr5D.!!$F1 959
9 TraesCS4A01G112300 chr5D 436576272 436577226 954 False 867.000000 867 83.418000 1 961 1 chr5D.!!$F2 960
10 TraesCS4A01G112300 chr7D 363600980 363601938 958 True 1136.000000 1136 88.302000 1 949 1 chr7D.!!$R1 948
11 TraesCS4A01G112300 chr6A 59099442 59100393 951 True 1112.000000 1112 87.967000 1 949 1 chr6A.!!$R1 948
12 TraesCS4A01G112300 chr6A 113522964 113523933 969 True 1079.000000 1079 87.054000 1 961 1 chr6A.!!$R2 960
13 TraesCS4A01G112300 chr6D 59650064 59651027 963 True 976.000000 976 85.204000 1 962 1 chr6D.!!$R1 961
14 TraesCS4A01G112300 chr1A 362430778 362431733 955 True 942.000000 942 84.892000 1 946 1 chr1A.!!$R1 945

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
894 984 0.549469 CTTTTGGCCTACGGGGGTAT 59.451 55.0 3.32 0.0 35.12 2.73 F
1072 1163 0.038166 GGGCTGATTCCACCACAAGA 59.962 55.0 0.00 0.0 0.00 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2152 2699 0.641275 TCGTTGTCGTTGTTGTGTCG 59.359 50.0 0.0 0.0 38.33 4.35 R
2977 3828 0.179000 GCATGTACTCCAGGTCCAGG 59.821 60.0 0.0 0.0 0.00 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 4.255510 ACCAATATGAGCATCCAGGTTT 57.744 40.909 0.00 0.00 0.00 3.27
205 233 0.880718 GATCGGGGTCTCGAAATGGC 60.881 60.000 0.00 0.00 42.69 4.40
483 538 0.984995 CTCCGAAAGAAGGAAGGGGT 59.015 55.000 0.00 0.00 37.32 4.95
488 546 1.368268 AAAGAAGGAAGGGGTGGCCA 61.368 55.000 0.00 0.00 0.00 5.36
602 682 4.503643 CCCCAAAGCACATCAATTGTTCTT 60.504 41.667 5.13 0.80 42.57 2.52
614 694 4.576873 TCAATTGTTCTTTTAGCCGTGTGA 59.423 37.500 5.13 0.00 0.00 3.58
642 725 2.257207 CCCTCCACAGTTTACTCCTCA 58.743 52.381 0.00 0.00 0.00 3.86
766 855 2.233922 GGATCAAGAGTTCGAGGGACAA 59.766 50.000 0.00 0.00 0.00 3.18
859 949 2.624316 TCGACTACATCAACCGTGTC 57.376 50.000 0.00 0.00 0.00 3.67
888 978 1.644786 CTTCCGCTTTTGGCCTACGG 61.645 60.000 3.32 10.18 45.15 4.02
894 984 0.549469 CTTTTGGCCTACGGGGGTAT 59.451 55.000 3.32 0.00 35.12 2.73
921 1011 0.612174 CACTCTCCCCCTCTCGTTGA 60.612 60.000 0.00 0.00 0.00 3.18
946 1036 9.135189 GATATGCATCTCCTAGATAGATCTTGT 57.865 37.037 0.19 0.00 38.32 3.16
949 1039 7.234355 TGCATCTCCTAGATAGATCTTGTGTA 58.766 38.462 0.00 0.00 38.32 2.90
950 1040 7.892771 TGCATCTCCTAGATAGATCTTGTGTAT 59.107 37.037 0.00 0.00 38.32 2.29
958 1048 9.995957 CTAGATAGATCTTGTGTATTCGTATGG 57.004 37.037 0.00 0.00 38.32 2.74
980 1070 4.082949 GGAAACAACTCCTCCCATTAAACG 60.083 45.833 0.00 0.00 32.21 3.60
989 1079 3.443681 CCTCCCATTAAACGAACATTGCT 59.556 43.478 0.00 0.00 0.00 3.91
991 1081 4.075682 TCCCATTAAACGAACATTGCTGA 58.924 39.130 0.00 0.00 0.00 4.26
1000 1090 2.975851 CGAACATTGCTGAAAAGTCTGC 59.024 45.455 0.00 0.00 46.08 4.26
1023 1114 8.393395 TGCAATAAATTCAGAAAAATACGAGC 57.607 30.769 0.00 0.00 0.00 5.03
1024 1115 7.487829 TGCAATAAATTCAGAAAAATACGAGCC 59.512 33.333 0.00 0.00 0.00 4.70
1028 1119 3.536956 TCAGAAAAATACGAGCCCGAT 57.463 42.857 0.00 0.00 39.50 4.18
1031 1122 3.374058 CAGAAAAATACGAGCCCGATTGT 59.626 43.478 0.00 0.00 39.50 2.71
1034 1125 1.935933 AATACGAGCCCGATTGTCAC 58.064 50.000 0.00 0.00 39.50 3.67
1036 1127 2.877360 TACGAGCCCGATTGTCACGC 62.877 60.000 0.00 0.00 39.50 5.34
1046 1137 2.599082 CGATTGTCACGCCTAGAACTTC 59.401 50.000 0.00 0.00 0.00 3.01
1053 1144 1.221021 GCCTAGAACTTCCCGGGTG 59.779 63.158 22.86 17.23 0.00 4.61
1068 1159 4.002797 GTGGGCTGATTCCACCAC 57.997 61.111 2.07 0.00 46.58 4.16
1072 1163 0.038166 GGGCTGATTCCACCACAAGA 59.962 55.000 0.00 0.00 0.00 3.02
1075 1166 2.827921 GGCTGATTCCACCACAAGAAAT 59.172 45.455 0.00 0.00 0.00 2.17
1080 1171 6.096001 GCTGATTCCACCACAAGAAATCTAAT 59.904 38.462 0.00 0.00 0.00 1.73
1086 1177 8.089625 TCCACCACAAGAAATCTAATCATCTA 57.910 34.615 0.00 0.00 0.00 1.98
1089 1180 8.341173 CACCACAAGAAATCTAATCATCTAAGC 58.659 37.037 0.00 0.00 0.00 3.09
1098 1189 9.979578 AAATCTAATCATCTAAGCTACACTCAG 57.020 33.333 0.00 0.00 0.00 3.35
1122 1213 4.233632 TGCAATCCACCTCACATATTCA 57.766 40.909 0.00 0.00 0.00 2.57
1135 1226 9.823647 ACCTCACATATTCAACAATTAGAGTAG 57.176 33.333 0.00 0.00 0.00 2.57
1165 1256 3.134574 TCCGTGGCTTAAAACTGACAT 57.865 42.857 0.00 0.00 0.00 3.06
1166 1257 3.071479 TCCGTGGCTTAAAACTGACATC 58.929 45.455 0.00 0.00 0.00 3.06
1167 1258 2.159707 CCGTGGCTTAAAACTGACATCG 60.160 50.000 0.00 0.00 0.00 3.84
1170 1261 2.742053 TGGCTTAAAACTGACATCGAGC 59.258 45.455 0.00 0.00 0.00 5.03
1197 1289 3.282021 TCCCAATGCTCAGATTTGTAGC 58.718 45.455 0.00 0.00 36.77 3.58
1209 1301 5.183713 TCAGATTTGTAGCAGGGAAAATGTG 59.816 40.000 0.00 0.00 35.65 3.21
1213 1305 2.037902 TGTAGCAGGGAAAATGTGACGA 59.962 45.455 0.00 0.00 0.00 4.20
1226 1634 0.949105 GTGACGACACACATGGGGTC 60.949 60.000 13.14 3.10 45.32 4.46
1261 1669 4.528531 TGTTTCCATTTTTCTTTTGCGC 57.471 36.364 0.00 0.00 0.00 6.09
1292 1700 4.445452 AAGCCAGCATAGTTGTTGATTG 57.555 40.909 0.00 0.00 36.26 2.67
1306 1714 8.141835 AGTTGTTGATTGTTTTTGAAATAGCC 57.858 30.769 0.00 0.00 0.00 3.93
1310 1718 7.011857 TGTTGATTGTTTTTGAAATAGCCAACC 59.988 33.333 0.00 0.00 0.00 3.77
1323 1731 1.352156 GCCAACCGCTCGAACAGTAG 61.352 60.000 0.00 0.00 0.00 2.57
1324 1732 1.352156 CCAACCGCTCGAACAGTAGC 61.352 60.000 0.00 0.00 35.33 3.58
1325 1733 1.080025 AACCGCTCGAACAGTAGCC 60.080 57.895 0.00 0.00 35.22 3.93
1332 1744 3.259064 GCTCGAACAGTAGCCAACATAA 58.741 45.455 0.00 0.00 32.40 1.90
1353 1765 7.713507 ACATAATTGCATGGTTACGTATACACT 59.286 33.333 3.32 0.00 0.00 3.55
1396 1808 1.858041 CAGTTGTGCTGCTGTCTCG 59.142 57.895 0.00 0.00 38.52 4.04
1406 1818 2.223595 GCTGCTGTCTCGCACTCTTATA 60.224 50.000 0.00 0.00 35.74 0.98
1417 1829 3.369756 CGCACTCTTATAGAACGGCAAAA 59.630 43.478 0.00 0.00 0.00 2.44
1425 1837 0.517316 AGAACGGCAAAATCACGCTC 59.483 50.000 0.00 0.00 0.00 5.03
1477 1892 2.673368 CTGGGAAATACGTCAGCTTGTC 59.327 50.000 0.00 0.00 0.00 3.18
1482 1897 4.201822 GGAAATACGTCAGCTTGTCAATCC 60.202 45.833 0.00 0.00 0.00 3.01
1494 1909 7.867403 TCAGCTTGTCAATCCAAAACTATTTTC 59.133 33.333 0.00 0.00 0.00 2.29
1554 1969 1.856012 GTGACACTGCAGCGAACTC 59.144 57.895 15.27 0.00 0.00 3.01
1557 1972 1.215655 GACACTGCAGCGAACTCGTT 61.216 55.000 15.27 0.00 42.22 3.85
1559 1974 1.067416 ACTGCAGCGAACTCGTTCA 59.933 52.632 15.27 0.00 42.22 3.18
1564 1979 0.039074 CAGCGAACTCGTTCACCTCT 60.039 55.000 10.10 0.00 42.22 3.69
1576 1991 1.672356 CACCTCTTTCCAGCACCCG 60.672 63.158 0.00 0.00 0.00 5.28
1621 2042 4.628074 TGGCGCTAATCACCTTCTATAAC 58.372 43.478 7.64 0.00 0.00 1.89
1623 2044 4.448060 GGCGCTAATCACCTTCTATAACAC 59.552 45.833 7.64 0.00 0.00 3.32
1624 2045 5.290386 GCGCTAATCACCTTCTATAACACT 58.710 41.667 0.00 0.00 0.00 3.55
1625 2046 5.753921 GCGCTAATCACCTTCTATAACACTT 59.246 40.000 0.00 0.00 0.00 3.16
1627 2048 7.621991 CGCTAATCACCTTCTATAACACTTTG 58.378 38.462 0.00 0.00 0.00 2.77
1629 2050 6.759497 AATCACCTTCTATAACACTTTGCC 57.241 37.500 0.00 0.00 0.00 4.52
1630 2051 5.235850 TCACCTTCTATAACACTTTGCCA 57.764 39.130 0.00 0.00 0.00 4.92
1632 2053 5.880332 TCACCTTCTATAACACTTTGCCATC 59.120 40.000 0.00 0.00 0.00 3.51
1633 2054 5.647658 CACCTTCTATAACACTTTGCCATCA 59.352 40.000 0.00 0.00 0.00 3.07
1635 2056 5.066505 CCTTCTATAACACTTTGCCATCACC 59.933 44.000 0.00 0.00 0.00 4.02
1636 2057 5.435686 TCTATAACACTTTGCCATCACCT 57.564 39.130 0.00 0.00 0.00 4.00
1637 2058 5.428253 TCTATAACACTTTGCCATCACCTC 58.572 41.667 0.00 0.00 0.00 3.85
1638 2059 2.664402 AACACTTTGCCATCACCTCT 57.336 45.000 0.00 0.00 0.00 3.69
1639 2060 1.901591 ACACTTTGCCATCACCTCTG 58.098 50.000 0.00 0.00 0.00 3.35
1675 2101 1.073025 TTGAGCGAACACCATGGCT 59.927 52.632 13.04 0.75 37.06 4.75
1680 2106 2.434185 GAACACCATGGCTCGCGA 60.434 61.111 13.04 9.26 0.00 5.87
1861 2296 2.443390 GCCTACAGGGACGGCCTA 60.443 66.667 7.57 0.00 37.86 3.93
1965 2426 0.972983 TCTCCTTCTCCCTTCGGCTG 60.973 60.000 0.00 0.00 0.00 4.85
2003 2516 1.073284 ACGTTGGGATACTGGCTTGTT 59.927 47.619 0.00 0.00 0.00 2.83
2004 2517 1.468520 CGTTGGGATACTGGCTTGTTG 59.531 52.381 0.00 0.00 0.00 3.33
2005 2518 1.202348 GTTGGGATACTGGCTTGTTGC 59.798 52.381 0.00 0.00 41.94 4.17
2006 2519 0.403655 TGGGATACTGGCTTGTTGCA 59.596 50.000 0.00 0.00 45.15 4.08
2044 2557 1.880027 GAATGCCTTCTCAACACCGTT 59.120 47.619 0.00 0.00 0.00 4.44
2045 2558 1.523758 ATGCCTTCTCAACACCGTTC 58.476 50.000 0.00 0.00 0.00 3.95
2187 2899 5.448162 CGACAACGAGAACTTTTCTTGAAAC 59.552 40.000 9.70 0.00 42.69 2.78
2268 3076 2.704572 GGACCTGGTGATGAAGAACAG 58.295 52.381 2.82 0.00 0.00 3.16
2378 3187 1.377725 CGTCCCCTTTGCATCTGCT 60.378 57.895 3.53 0.00 42.66 4.24
2399 3208 4.687018 GCTTTTGTTGCATCATTCACATGA 59.313 37.500 0.00 0.00 43.85 3.07
2401 3221 6.292973 GCTTTTGTTGCATCATTCACATGAAA 60.293 34.615 0.00 0.00 42.93 2.69
2468 3289 0.170561 TCCAGCTTTCGCTCGAGTAC 59.829 55.000 15.13 0.00 45.15 2.73
2519 3340 0.476771 ACCAGTTCGTTCCATGGGTT 59.523 50.000 13.02 0.00 37.13 4.11
2568 3389 0.466739 AAGGGGCCGTTTTCTTCGTT 60.467 50.000 5.47 0.00 0.00 3.85
2669 3516 4.717778 TCTTGGTATCAGGATTACGGGAAA 59.282 41.667 0.00 0.00 0.00 3.13
2673 3520 4.689345 GGTATCAGGATTACGGGAAATTCG 59.311 45.833 0.00 0.00 0.00 3.34
2747 3594 4.559063 CCGGGCATGGAGGCAGAG 62.559 72.222 0.00 0.00 46.44 3.35
2783 3630 0.652592 GACTTTGATCGTGCCGATGG 59.347 55.000 13.68 5.36 47.00 3.51
2814 3661 2.623889 CGACGAGATTAGGATGGTCCTT 59.376 50.000 3.49 0.00 46.91 3.36
2835 3682 7.333672 GTCCTTCCGGATGGTGATAATAATAAC 59.666 40.741 29.93 15.72 42.43 1.89
2883 3731 4.257267 TCATACATCTGAACATAGGGCG 57.743 45.455 0.00 0.00 0.00 6.13
2899 3747 1.646189 GGCGGTTCAATCTCTCTGTC 58.354 55.000 0.00 0.00 0.00 3.51
2948 3796 6.372659 TGCTCTTAGATTGATCTGGTTTGTTC 59.627 38.462 3.79 0.00 37.76 3.18
2949 3797 6.372659 GCTCTTAGATTGATCTGGTTTGTTCA 59.627 38.462 3.79 0.00 37.76 3.18
2958 3806 6.295249 TGATCTGGTTTGTTCAGTTGACATA 58.705 36.000 0.00 0.00 34.15 2.29
2973 3824 6.487668 CAGTTGACATATGGAATCAATAGCCA 59.512 38.462 7.80 0.00 34.98 4.75
2977 3828 7.108194 TGACATATGGAATCAATAGCCAGATC 58.892 38.462 7.80 0.00 31.70 2.75
2978 3829 6.421485 ACATATGGAATCAATAGCCAGATCC 58.579 40.000 7.80 0.00 31.70 3.36
2979 3830 6.217074 ACATATGGAATCAATAGCCAGATCCT 59.783 38.462 7.80 0.00 31.70 3.24
2980 3831 4.362470 TGGAATCAATAGCCAGATCCTG 57.638 45.455 0.00 0.00 0.00 3.86
3008 3861 4.515191 TGGAGTACATGCTCTGTTGAAAAC 59.485 41.667 0.00 0.00 39.39 2.43
3022 3875 2.823984 TGAAAACAAACAGGCAGCATG 58.176 42.857 5.26 5.26 40.87 4.06
3065 3920 8.696043 AGACTATGCTGAATGCCAAATTTATA 57.304 30.769 0.00 0.00 42.00 0.98
3066 3921 8.790718 AGACTATGCTGAATGCCAAATTTATAG 58.209 33.333 0.00 0.00 42.00 1.31
3068 3923 8.917088 ACTATGCTGAATGCCAAATTTATAGTT 58.083 29.630 0.00 0.00 42.00 2.24
3069 3924 9.754382 CTATGCTGAATGCCAAATTTATAGTTT 57.246 29.630 0.00 0.00 42.00 2.66
3070 3925 7.830940 TGCTGAATGCCAAATTTATAGTTTG 57.169 32.000 0.00 5.96 42.00 2.93
3090 3945 7.460296 AGTTTGGAAATTTAAGCAAACGTTTG 58.540 30.769 31.76 31.76 41.03 2.93
3092 3947 8.381387 GTTTGGAAATTTAAGCAAACGTTTGTA 58.619 29.630 34.39 21.17 40.24 2.41
3093 3948 7.687005 TGGAAATTTAAGCAAACGTTTGTAG 57.313 32.000 34.39 16.10 40.24 2.74
3094 3949 7.481642 TGGAAATTTAAGCAAACGTTTGTAGA 58.518 30.769 34.39 19.48 40.24 2.59
3126 4741 4.953579 AGGTTTATCATTTATTGGTGCCGT 59.046 37.500 0.00 0.00 0.00 5.68
3131 4746 4.209307 TCATTTATTGGTGCCGTACTGA 57.791 40.909 0.00 0.00 0.00 3.41
3132 4747 3.936453 TCATTTATTGGTGCCGTACTGAC 59.064 43.478 0.00 0.00 0.00 3.51
3134 4749 3.404224 TTATTGGTGCCGTACTGACAA 57.596 42.857 0.00 0.00 0.00 3.18
3136 4751 0.876777 TTGGTGCCGTACTGACAACG 60.877 55.000 0.00 0.00 40.01 4.10
3139 5058 0.505655 GTGCCGTACTGACAACGAAC 59.494 55.000 1.25 0.00 42.90 3.95
3141 5060 1.210870 GCCGTACTGACAACGAACAA 58.789 50.000 1.25 0.00 42.90 2.83
3184 5109 1.921982 TTTGCAAGCATCAGGCCTTA 58.078 45.000 0.00 0.00 46.50 2.69
3210 5139 0.407139 AGGAAAGCATCAGGCCTTGT 59.593 50.000 0.00 0.00 46.50 3.16
3245 5205 2.093606 ACGACTGGACTCGATCTACAGA 60.094 50.000 9.04 0.00 37.11 3.41
3258 5218 5.646360 TCGATCTACAGAGTGTACAACATGA 59.354 40.000 0.00 0.00 0.00 3.07
3264 5224 3.185188 CAGAGTGTACAACATGACTGCAC 59.815 47.826 0.00 1.01 0.00 4.57
3292 5252 6.540914 CCCTACACAACCAATTATATCACGTT 59.459 38.462 0.00 0.00 0.00 3.99
3298 5258 7.012327 CACAACCAATTATATCACGTTCCAGAT 59.988 37.037 0.00 0.00 0.00 2.90
3299 5259 7.556275 ACAACCAATTATATCACGTTCCAGATT 59.444 33.333 0.00 0.00 0.00 2.40
3301 5261 9.621629 AACCAATTATATCACGTTCCAGATTTA 57.378 29.630 0.00 0.00 0.00 1.40
3302 5262 9.793259 ACCAATTATATCACGTTCCAGATTTAT 57.207 29.630 0.00 0.00 0.00 1.40
3314 5284 8.755977 ACGTTCCAGATTTATTAGGAGAACTAA 58.244 33.333 0.00 0.00 45.24 2.24
3340 5310 1.001378 ACAAGCGGTGCAAACAAGATC 60.001 47.619 0.00 0.00 0.00 2.75
3364 5334 7.939782 TCAACACAACTCACATACATTTTGAT 58.060 30.769 0.00 0.00 0.00 2.57
3365 5335 7.861872 TCAACACAACTCACATACATTTTGATG 59.138 33.333 0.00 0.00 0.00 3.07
3366 5336 7.509141 ACACAACTCACATACATTTTGATGA 57.491 32.000 0.00 0.00 0.00 2.92
3367 5337 7.939782 ACACAACTCACATACATTTTGATGAA 58.060 30.769 0.00 0.00 0.00 2.57
3368 5338 8.412456 ACACAACTCACATACATTTTGATGAAA 58.588 29.630 0.00 0.00 0.00 2.69
3369 5339 9.414295 CACAACTCACATACATTTTGATGAAAT 57.586 29.630 0.00 0.00 38.49 2.17
3370 5340 9.985730 ACAACTCACATACATTTTGATGAAATT 57.014 25.926 0.00 0.00 35.79 1.82
3445 5415 0.176910 TCAGTCAACTGGCGTGACAA 59.823 50.000 15.39 3.68 43.91 3.18
3521 5492 1.684734 GGGCCTCTCCTGAACGGTA 60.685 63.158 0.84 0.00 34.39 4.02
3522 5493 1.049289 GGGCCTCTCCTGAACGGTAT 61.049 60.000 0.84 0.00 34.39 2.73
3523 5494 0.105039 GGCCTCTCCTGAACGGTATG 59.895 60.000 0.00 0.00 0.00 2.39
3524 5495 0.824759 GCCTCTCCTGAACGGTATGT 59.175 55.000 0.00 0.00 0.00 2.29
3525 5496 1.207329 GCCTCTCCTGAACGGTATGTT 59.793 52.381 0.00 0.00 45.61 2.71
3526 5497 2.893637 CCTCTCCTGAACGGTATGTTG 58.106 52.381 0.00 0.00 42.09 3.33
3527 5498 2.496070 CCTCTCCTGAACGGTATGTTGA 59.504 50.000 0.00 0.00 42.09 3.18
3528 5499 3.056107 CCTCTCCTGAACGGTATGTTGAA 60.056 47.826 0.00 0.00 42.09 2.69
3529 5500 4.562757 CCTCTCCTGAACGGTATGTTGAAA 60.563 45.833 0.00 0.00 42.09 2.69
3530 5501 5.160607 TCTCCTGAACGGTATGTTGAAAT 57.839 39.130 0.00 0.00 42.09 2.17
3531 5502 6.288941 TCTCCTGAACGGTATGTTGAAATA 57.711 37.500 0.00 0.00 42.09 1.40
3532 5503 6.103997 TCTCCTGAACGGTATGTTGAAATAC 58.896 40.000 0.00 0.00 42.09 1.89
3533 5504 4.865925 TCCTGAACGGTATGTTGAAATACG 59.134 41.667 0.00 0.00 42.09 3.06
3534 5505 4.865925 CCTGAACGGTATGTTGAAATACGA 59.134 41.667 0.00 0.00 42.09 3.43
3535 5506 5.005394 CCTGAACGGTATGTTGAAATACGAG 59.995 44.000 0.00 0.00 42.09 4.18
3536 5507 4.327898 TGAACGGTATGTTGAAATACGAGC 59.672 41.667 0.00 0.00 42.09 5.03
3537 5508 3.852286 ACGGTATGTTGAAATACGAGCA 58.148 40.909 0.00 0.00 34.42 4.26
3538 5509 4.247258 ACGGTATGTTGAAATACGAGCAA 58.753 39.130 0.00 0.00 34.42 3.91
3539 5510 4.873827 ACGGTATGTTGAAATACGAGCAAT 59.126 37.500 0.00 0.00 34.42 3.56
3540 5511 5.353123 ACGGTATGTTGAAATACGAGCAATT 59.647 36.000 0.00 0.00 34.42 2.32
3541 5512 6.128117 ACGGTATGTTGAAATACGAGCAATTT 60.128 34.615 0.00 0.00 34.42 1.82
3542 5513 7.064847 ACGGTATGTTGAAATACGAGCAATTTA 59.935 33.333 0.00 0.00 34.42 1.40
3543 5514 8.067784 CGGTATGTTGAAATACGAGCAATTTAT 58.932 33.333 0.00 0.00 34.42 1.40
3544 5515 9.382244 GGTATGTTGAAATACGAGCAATTTATC 57.618 33.333 0.00 0.00 34.42 1.75
3545 5516 9.092322 GTATGTTGAAATACGAGCAATTTATCG 57.908 33.333 7.36 7.36 44.36 2.92
3546 5517 7.297229 TGTTGAAATACGAGCAATTTATCGA 57.703 32.000 14.28 0.00 41.40 3.59
3547 5518 7.744059 TGTTGAAATACGAGCAATTTATCGAA 58.256 30.769 14.28 0.00 41.40 3.71
3548 5519 8.394877 TGTTGAAATACGAGCAATTTATCGAAT 58.605 29.630 14.28 0.00 41.40 3.34
3549 5520 8.673275 GTTGAAATACGAGCAATTTATCGAATG 58.327 33.333 14.28 0.00 41.40 2.67
3550 5521 8.137210 TGAAATACGAGCAATTTATCGAATGA 57.863 30.769 14.28 0.23 41.40 2.57
3551 5522 8.773645 TGAAATACGAGCAATTTATCGAATGAT 58.226 29.630 14.28 2.12 41.40 2.45
3552 5523 9.599322 GAAATACGAGCAATTTATCGAATGATT 57.401 29.630 14.28 6.70 41.40 2.57
3553 5524 9.950680 AAATACGAGCAATTTATCGAATGATTT 57.049 25.926 14.28 10.72 41.40 2.17
3554 5525 9.950680 AATACGAGCAATTTATCGAATGATTTT 57.049 25.926 14.28 0.00 41.40 1.82
3557 5528 9.950680 ACGAGCAATTTATCGAATGATTTTATT 57.049 25.926 14.28 0.00 41.40 1.40
3584 5555 8.894768 ACAGAAATACTAGATAAAGCATGACC 57.105 34.615 0.00 0.00 0.00 4.02
3585 5556 8.486210 ACAGAAATACTAGATAAAGCATGACCA 58.514 33.333 0.00 0.00 0.00 4.02
3586 5557 8.986847 CAGAAATACTAGATAAAGCATGACCAG 58.013 37.037 0.00 0.00 0.00 4.00
3587 5558 8.709308 AGAAATACTAGATAAAGCATGACCAGT 58.291 33.333 0.00 0.00 0.00 4.00
3588 5559 9.982651 GAAATACTAGATAAAGCATGACCAGTA 57.017 33.333 0.00 0.00 0.00 2.74
3592 5563 8.713708 ACTAGATAAAGCATGACCAGTATAGT 57.286 34.615 0.00 0.00 0.00 2.12
3593 5564 8.580720 ACTAGATAAAGCATGACCAGTATAGTG 58.419 37.037 0.00 0.09 0.00 2.74
3594 5565 6.763355 AGATAAAGCATGACCAGTATAGTGG 58.237 40.000 22.84 22.84 44.01 4.00
3608 5579 8.197988 CCAGTATAGTGGTGATAAAACAAGAC 57.802 38.462 17.34 0.00 32.32 3.01
3609 5580 7.822334 CCAGTATAGTGGTGATAAAACAAGACA 59.178 37.037 17.34 0.00 32.32 3.41
3610 5581 9.383519 CAGTATAGTGGTGATAAAACAAGACAT 57.616 33.333 0.00 0.00 0.00 3.06
3611 5582 9.383519 AGTATAGTGGTGATAAAACAAGACATG 57.616 33.333 0.00 0.00 0.00 3.21
3612 5583 5.376854 AGTGGTGATAAAACAAGACATGC 57.623 39.130 0.00 0.00 0.00 4.06
3613 5584 4.083324 AGTGGTGATAAAACAAGACATGCG 60.083 41.667 0.00 0.00 0.00 4.73
3614 5585 4.068599 TGGTGATAAAACAAGACATGCGA 58.931 39.130 0.00 0.00 0.00 5.10
3615 5586 4.699735 TGGTGATAAAACAAGACATGCGAT 59.300 37.500 0.00 0.00 0.00 4.58
3616 5587 5.182950 TGGTGATAAAACAAGACATGCGATT 59.817 36.000 0.00 0.00 0.00 3.34
3617 5588 6.092748 GGTGATAAAACAAGACATGCGATTT 58.907 36.000 0.00 0.00 0.00 2.17
3618 5589 6.033831 GGTGATAAAACAAGACATGCGATTTG 59.966 38.462 0.00 0.00 0.00 2.32
3619 5590 6.801377 GTGATAAAACAAGACATGCGATTTGA 59.199 34.615 0.00 0.00 0.00 2.69
3620 5591 6.801377 TGATAAAACAAGACATGCGATTTGAC 59.199 34.615 0.00 0.00 0.00 3.18
3621 5592 4.566545 AAACAAGACATGCGATTTGACA 57.433 36.364 0.00 0.00 0.00 3.58
3622 5593 4.566545 AACAAGACATGCGATTTGACAA 57.433 36.364 0.00 0.00 0.00 3.18
3623 5594 4.566545 ACAAGACATGCGATTTGACAAA 57.433 36.364 2.48 2.48 0.00 2.83
3624 5595 4.539870 ACAAGACATGCGATTTGACAAAG 58.460 39.130 6.77 0.00 0.00 2.77
3625 5596 4.275689 ACAAGACATGCGATTTGACAAAGA 59.724 37.500 6.77 0.00 0.00 2.52
3626 5597 5.214417 CAAGACATGCGATTTGACAAAGAA 58.786 37.500 6.77 0.00 0.00 2.52
3627 5598 5.437289 AGACATGCGATTTGACAAAGAAA 57.563 34.783 6.77 0.00 0.00 2.52
3628 5599 5.830912 AGACATGCGATTTGACAAAGAAAA 58.169 33.333 6.77 0.00 0.00 2.29
3629 5600 5.916883 AGACATGCGATTTGACAAAGAAAAG 59.083 36.000 6.77 0.00 0.00 2.27
3630 5601 4.984161 ACATGCGATTTGACAAAGAAAAGG 59.016 37.500 6.77 0.00 0.00 3.11
3631 5602 4.647424 TGCGATTTGACAAAGAAAAGGT 57.353 36.364 6.77 0.00 0.00 3.50
3632 5603 5.759506 TGCGATTTGACAAAGAAAAGGTA 57.240 34.783 6.77 0.00 0.00 3.08
3633 5604 6.137794 TGCGATTTGACAAAGAAAAGGTAA 57.862 33.333 6.77 0.00 0.00 2.85
3634 5605 6.565234 TGCGATTTGACAAAGAAAAGGTAAA 58.435 32.000 6.77 0.00 0.00 2.01
3635 5606 6.474102 TGCGATTTGACAAAGAAAAGGTAAAC 59.526 34.615 6.77 0.00 0.00 2.01
3636 5607 6.474102 GCGATTTGACAAAGAAAAGGTAAACA 59.526 34.615 6.77 0.00 0.00 2.83
3637 5608 7.169140 GCGATTTGACAAAGAAAAGGTAAACAT 59.831 33.333 6.77 0.00 0.00 2.71
3638 5609 8.690840 CGATTTGACAAAGAAAAGGTAAACATC 58.309 33.333 6.77 0.00 0.00 3.06
3639 5610 9.528018 GATTTGACAAAGAAAAGGTAAACATCA 57.472 29.630 6.77 0.00 0.00 3.07
3641 5612 9.528018 TTTGACAAAGAAAAGGTAAACATCATC 57.472 29.630 0.00 0.00 0.00 2.92
3642 5613 8.463930 TGACAAAGAAAAGGTAAACATCATCT 57.536 30.769 0.00 0.00 0.00 2.90
3643 5614 8.912988 TGACAAAGAAAAGGTAAACATCATCTT 58.087 29.630 0.00 0.00 0.00 2.40
3644 5615 9.399403 GACAAAGAAAAGGTAAACATCATCTTC 57.601 33.333 0.00 0.00 0.00 2.87
3645 5616 8.912988 ACAAAGAAAAGGTAAACATCATCTTCA 58.087 29.630 0.00 0.00 0.00 3.02
3646 5617 9.918630 CAAAGAAAAGGTAAACATCATCTTCAT 57.081 29.630 0.00 0.00 0.00 2.57
3694 5665 8.439993 TCTAGAGTAGACAGTATAGCAAGTTG 57.560 38.462 0.00 0.00 0.00 3.16
3695 5666 5.897050 AGAGTAGACAGTATAGCAAGTTGC 58.103 41.667 20.44 20.44 45.46 4.17
3713 5684 8.997323 GCAAGTTGCATATATGAAATAGAGTCT 58.003 33.333 22.90 0.00 44.26 3.24
3727 5698 8.585881 TGAAATAGAGTCTAACATATGTAGGGC 58.414 37.037 9.21 6.63 0.00 5.19
3728 5699 8.492415 AAATAGAGTCTAACATATGTAGGGCA 57.508 34.615 9.21 0.00 0.00 5.36
3729 5700 8.492415 AATAGAGTCTAACATATGTAGGGCAA 57.508 34.615 9.21 0.00 0.00 4.52
3730 5701 6.808321 AGAGTCTAACATATGTAGGGCAAA 57.192 37.500 9.21 0.00 0.00 3.68
3731 5702 7.380423 AGAGTCTAACATATGTAGGGCAAAT 57.620 36.000 9.21 0.00 0.00 2.32
3732 5703 8.492415 AGAGTCTAACATATGTAGGGCAAATA 57.508 34.615 9.21 0.00 0.00 1.40
3733 5704 9.105844 AGAGTCTAACATATGTAGGGCAAATAT 57.894 33.333 9.21 0.00 0.00 1.28
3734 5705 9.726438 GAGTCTAACATATGTAGGGCAAATATT 57.274 33.333 9.21 0.00 0.00 1.28
3740 5711 9.860650 AACATATGTAGGGCAAATATTAGAACA 57.139 29.630 9.21 0.00 0.00 3.18
3741 5712 9.860650 ACATATGTAGGGCAAATATTAGAACAA 57.139 29.630 6.56 0.00 0.00 2.83
3745 5716 8.871629 TGTAGGGCAAATATTAGAACAAGAAA 57.128 30.769 0.00 0.00 0.00 2.52
3746 5717 8.736244 TGTAGGGCAAATATTAGAACAAGAAAC 58.264 33.333 0.00 0.00 0.00 2.78
3747 5718 8.957466 GTAGGGCAAATATTAGAACAAGAAACT 58.043 33.333 0.00 0.00 0.00 2.66
3748 5719 7.830739 AGGGCAAATATTAGAACAAGAAACTG 58.169 34.615 0.00 0.00 0.00 3.16
3749 5720 7.451566 AGGGCAAATATTAGAACAAGAAACTGT 59.548 33.333 0.00 0.00 0.00 3.55
3750 5721 8.736244 GGGCAAATATTAGAACAAGAAACTGTA 58.264 33.333 0.00 0.00 0.00 2.74
3751 5722 9.774742 GGCAAATATTAGAACAAGAAACTGTAG 57.225 33.333 0.00 0.00 0.00 2.74
3752 5723 9.278734 GCAAATATTAGAACAAGAAACTGTAGC 57.721 33.333 0.00 0.00 0.00 3.58
3755 5726 8.723942 ATATTAGAACAAGAAACTGTAGCAGG 57.276 34.615 1.08 0.00 35.51 4.85
3756 5727 4.689612 AGAACAAGAAACTGTAGCAGGA 57.310 40.909 1.08 0.00 35.51 3.86
3757 5728 4.381411 AGAACAAGAAACTGTAGCAGGAC 58.619 43.478 1.08 0.00 35.51 3.85
3758 5729 3.127425 ACAAGAAACTGTAGCAGGACC 57.873 47.619 1.08 0.00 35.51 4.46
3759 5730 2.706190 ACAAGAAACTGTAGCAGGACCT 59.294 45.455 0.00 0.00 35.51 3.85
3760 5731 3.244249 ACAAGAAACTGTAGCAGGACCTC 60.244 47.826 0.00 0.00 35.51 3.85
3761 5732 2.896039 AGAAACTGTAGCAGGACCTCT 58.104 47.619 0.00 0.00 35.51 3.69
3762 5733 4.048970 AGAAACTGTAGCAGGACCTCTA 57.951 45.455 0.00 0.00 35.51 2.43
3763 5734 4.417437 AGAAACTGTAGCAGGACCTCTAA 58.583 43.478 0.00 0.00 35.51 2.10
3764 5735 5.026790 AGAAACTGTAGCAGGACCTCTAAT 58.973 41.667 0.00 0.00 35.51 1.73
3765 5736 6.195700 AGAAACTGTAGCAGGACCTCTAATA 58.804 40.000 0.00 0.00 35.51 0.98
3766 5737 6.322712 AGAAACTGTAGCAGGACCTCTAATAG 59.677 42.308 0.00 2.39 35.51 1.73
3767 5738 5.390087 ACTGTAGCAGGACCTCTAATAGA 57.610 43.478 0.00 0.00 35.51 1.98
3768 5739 5.767670 ACTGTAGCAGGACCTCTAATAGAA 58.232 41.667 0.00 0.00 35.51 2.10
3769 5740 6.195700 ACTGTAGCAGGACCTCTAATAGAAA 58.804 40.000 0.00 0.00 35.51 2.52
3770 5741 6.322712 ACTGTAGCAGGACCTCTAATAGAAAG 59.677 42.308 0.00 0.00 35.51 2.62
3771 5742 5.598830 TGTAGCAGGACCTCTAATAGAAAGG 59.401 44.000 0.00 0.00 36.21 3.11
3772 5743 4.884961 AGCAGGACCTCTAATAGAAAGGA 58.115 43.478 2.97 0.00 34.16 3.36
3773 5744 4.898861 AGCAGGACCTCTAATAGAAAGGAG 59.101 45.833 2.97 0.00 34.16 3.69
3774 5745 4.896482 GCAGGACCTCTAATAGAAAGGAGA 59.104 45.833 2.97 0.00 34.16 3.71
3775 5746 5.364157 GCAGGACCTCTAATAGAAAGGAGAA 59.636 44.000 2.97 0.00 34.16 2.87
3776 5747 6.462347 GCAGGACCTCTAATAGAAAGGAGAAG 60.462 46.154 2.97 0.00 34.16 2.85
3777 5748 6.836527 CAGGACCTCTAATAGAAAGGAGAAGA 59.163 42.308 2.97 0.00 34.16 2.87
3778 5749 7.343316 CAGGACCTCTAATAGAAAGGAGAAGAA 59.657 40.741 2.97 0.00 34.16 2.52
3779 5750 7.343574 AGGACCTCTAATAGAAAGGAGAAGAAC 59.656 40.741 2.97 0.00 34.16 3.01
3780 5751 7.124448 GGACCTCTAATAGAAAGGAGAAGAACA 59.876 40.741 2.97 0.00 34.16 3.18
3781 5752 7.842982 ACCTCTAATAGAAAGGAGAAGAACAC 58.157 38.462 2.97 0.00 34.16 3.32
3782 5753 6.975772 CCTCTAATAGAAAGGAGAAGAACACG 59.024 42.308 0.00 0.00 31.44 4.49
3783 5754 7.363094 CCTCTAATAGAAAGGAGAAGAACACGT 60.363 40.741 0.00 0.00 31.44 4.49
3784 5755 8.571461 TCTAATAGAAAGGAGAAGAACACGTA 57.429 34.615 0.00 0.00 0.00 3.57
3785 5756 8.457261 TCTAATAGAAAGGAGAAGAACACGTAC 58.543 37.037 0.00 0.00 0.00 3.67
3786 5757 3.898529 AGAAAGGAGAAGAACACGTACG 58.101 45.455 15.01 15.01 0.00 3.67
3787 5758 2.719426 AAGGAGAAGAACACGTACGG 57.281 50.000 21.06 11.05 0.00 4.02
3788 5759 0.886563 AGGAGAAGAACACGTACGGG 59.113 55.000 17.69 17.69 0.00 5.28
3789 5760 0.883833 GGAGAAGAACACGTACGGGA 59.116 55.000 27.01 0.00 0.00 5.14
3790 5761 1.402062 GGAGAAGAACACGTACGGGAC 60.402 57.143 27.01 17.17 0.00 4.46
3791 5762 1.267806 GAGAAGAACACGTACGGGACA 59.732 52.381 27.01 0.00 0.00 4.02
3792 5763 1.268899 AGAAGAACACGTACGGGACAG 59.731 52.381 27.01 8.39 0.00 3.51
3793 5764 0.319297 AAGAACACGTACGGGACAGC 60.319 55.000 27.01 9.90 0.00 4.40
3794 5765 1.007038 GAACACGTACGGGACAGCA 60.007 57.895 27.01 0.00 0.00 4.41
3795 5766 1.006571 AACACGTACGGGACAGCAG 60.007 57.895 27.01 3.29 0.00 4.24
3796 5767 2.809601 CACGTACGGGACAGCAGC 60.810 66.667 21.06 0.00 0.00 5.25
3797 5768 3.299977 ACGTACGGGACAGCAGCA 61.300 61.111 21.06 0.00 0.00 4.41
3798 5769 2.507102 CGTACGGGACAGCAGCAG 60.507 66.667 7.57 0.00 0.00 4.24
3799 5770 2.815647 GTACGGGACAGCAGCAGC 60.816 66.667 0.00 0.00 42.56 5.25
3800 5771 3.310307 TACGGGACAGCAGCAGCA 61.310 61.111 3.17 0.00 45.49 4.41
3801 5772 3.300934 TACGGGACAGCAGCAGCAG 62.301 63.158 3.17 0.00 45.49 4.24
3802 5773 4.383861 CGGGACAGCAGCAGCAGA 62.384 66.667 3.17 0.00 45.49 4.26
3803 5774 2.033141 GGGACAGCAGCAGCAGAA 59.967 61.111 3.17 0.00 45.49 3.02
3804 5775 2.039405 GGGACAGCAGCAGCAGAAG 61.039 63.158 3.17 0.00 45.49 2.85
3805 5776 2.688794 GGACAGCAGCAGCAGAAGC 61.689 63.158 3.17 0.00 45.49 3.86
3815 5786 2.866028 GCAGAAGCGCTGGACTTG 59.134 61.111 12.58 6.60 45.03 3.16
3816 5787 2.684843 GCAGAAGCGCTGGACTTGG 61.685 63.158 12.58 1.74 45.03 3.61
3817 5788 2.037136 CAGAAGCGCTGGACTTGGG 61.037 63.158 12.58 0.00 41.07 4.12
3818 5789 2.747855 GAAGCGCTGGACTTGGGG 60.748 66.667 12.58 0.00 0.00 4.96
3819 5790 3.553095 GAAGCGCTGGACTTGGGGT 62.553 63.158 12.58 0.00 0.00 4.95
3820 5791 3.553095 AAGCGCTGGACTTGGGGTC 62.553 63.158 12.58 0.00 43.79 4.46
3822 5793 4.760047 CGCTGGACTTGGGGTCGG 62.760 72.222 0.00 0.00 45.35 4.79
3823 5794 3.637273 GCTGGACTTGGGGTCGGT 61.637 66.667 0.00 0.00 45.35 4.69
3824 5795 2.347490 CTGGACTTGGGGTCGGTG 59.653 66.667 0.00 0.00 45.35 4.94
3825 5796 2.446994 TGGACTTGGGGTCGGTGT 60.447 61.111 0.00 0.00 45.35 4.16
3826 5797 2.346365 GGACTTGGGGTCGGTGTC 59.654 66.667 0.00 0.00 45.35 3.67
3827 5798 2.346365 GACTTGGGGTCGGTGTCC 59.654 66.667 0.00 0.00 35.07 4.02
3828 5799 2.122547 ACTTGGGGTCGGTGTCCT 60.123 61.111 0.00 0.00 0.00 3.85
3829 5800 2.168666 GACTTGGGGTCGGTGTCCTC 62.169 65.000 0.00 0.00 35.07 3.71
3830 5801 3.296709 CTTGGGGTCGGTGTCCTCG 62.297 68.421 0.00 0.00 0.00 4.63
3834 5805 4.436998 GGTCGGTGTCCTCGCCTG 62.437 72.222 0.00 0.00 41.65 4.85
3838 5809 4.101448 GGTGTCCTCGCCTGCCAT 62.101 66.667 0.00 0.00 40.73 4.40
3839 5810 2.821366 GTGTCCTCGCCTGCCATG 60.821 66.667 0.00 0.00 0.00 3.66
3840 5811 3.321648 TGTCCTCGCCTGCCATGT 61.322 61.111 0.00 0.00 0.00 3.21
3841 5812 2.512515 GTCCTCGCCTGCCATGTC 60.513 66.667 0.00 0.00 0.00 3.06
3842 5813 3.002583 TCCTCGCCTGCCATGTCA 61.003 61.111 0.00 0.00 0.00 3.58
3843 5814 2.191375 CCTCGCCTGCCATGTCAT 59.809 61.111 0.00 0.00 0.00 3.06
3844 5815 1.890979 CCTCGCCTGCCATGTCATC 60.891 63.158 0.00 0.00 0.00 2.92
3845 5816 2.202919 TCGCCTGCCATGTCATCG 60.203 61.111 0.00 0.00 0.00 3.84
3846 5817 2.202919 CGCCTGCCATGTCATCGA 60.203 61.111 0.00 0.00 0.00 3.59
3847 5818 2.242572 CGCCTGCCATGTCATCGAG 61.243 63.158 0.00 0.00 0.00 4.04
3848 5819 1.890979 GCCTGCCATGTCATCGAGG 60.891 63.158 0.00 0.00 0.00 4.63
3849 5820 1.825341 CCTGCCATGTCATCGAGGA 59.175 57.895 0.00 0.00 0.00 3.71
3850 5821 0.249784 CCTGCCATGTCATCGAGGAG 60.250 60.000 0.00 0.00 0.00 3.69
3851 5822 0.249784 CTGCCATGTCATCGAGGAGG 60.250 60.000 0.00 0.00 0.00 4.30
3852 5823 0.977627 TGCCATGTCATCGAGGAGGT 60.978 55.000 0.00 0.00 0.00 3.85
3853 5824 0.249657 GCCATGTCATCGAGGAGGTC 60.250 60.000 0.00 0.00 0.00 3.85
3861 5832 3.054503 CGAGGAGGTCGTGGACGT 61.055 66.667 0.00 0.00 44.20 4.34
3862 5833 2.876219 GAGGAGGTCGTGGACGTC 59.124 66.667 7.13 7.13 43.84 4.34
3863 5834 3.036783 GAGGAGGTCGTGGACGTCG 62.037 68.421 9.92 0.00 44.99 5.12
3864 5835 4.112341 GGAGGTCGTGGACGTCGG 62.112 72.222 9.92 1.31 44.99 4.79
3865 5836 4.112341 GAGGTCGTGGACGTCGGG 62.112 72.222 9.92 0.92 37.62 5.14
3868 5839 3.673484 GTCGTGGACGTCGGGGAA 61.673 66.667 9.92 0.00 40.80 3.97
3869 5840 3.367743 TCGTGGACGTCGGGGAAG 61.368 66.667 9.92 0.00 40.80 3.46
3870 5841 3.367743 CGTGGACGTCGGGGAAGA 61.368 66.667 9.92 0.00 34.11 2.87
3871 5842 2.922950 CGTGGACGTCGGGGAAGAA 61.923 63.158 9.92 0.00 34.11 2.52
3872 5843 1.080025 GTGGACGTCGGGGAAGAAG 60.080 63.158 9.92 0.00 0.00 2.85
3873 5844 1.532316 TGGACGTCGGGGAAGAAGT 60.532 57.895 9.92 0.00 35.65 3.01
3874 5845 1.214853 GGACGTCGGGGAAGAAGTC 59.785 63.158 9.92 4.85 44.84 3.01
3875 5846 1.154073 GACGTCGGGGAAGAAGTCG 60.154 63.158 0.00 0.00 39.15 4.18
3876 5847 1.860484 GACGTCGGGGAAGAAGTCGT 61.860 60.000 0.00 0.00 39.15 4.34
3877 5848 1.154073 CGTCGGGGAAGAAGTCGTC 60.154 63.158 0.00 0.00 0.00 4.20
3878 5849 1.154073 GTCGGGGAAGAAGTCGTCG 60.154 63.158 0.00 0.00 0.00 5.12
3879 5850 1.601759 TCGGGGAAGAAGTCGTCGT 60.602 57.895 0.00 0.00 0.00 4.34
3880 5851 1.154073 CGGGGAAGAAGTCGTCGTC 60.154 63.158 0.00 0.00 34.29 4.20
3881 5852 1.154073 GGGGAAGAAGTCGTCGTCG 60.154 63.158 0.00 0.00 35.75 5.12
3882 5853 1.154073 GGGAAGAAGTCGTCGTCGG 60.154 63.158 1.55 0.00 35.75 4.79
3883 5854 1.154073 GGAAGAAGTCGTCGTCGGG 60.154 63.158 1.55 0.00 35.75 5.14
3884 5855 1.154073 GAAGAAGTCGTCGTCGGGG 60.154 63.158 1.55 0.00 37.69 5.73
3885 5856 1.580845 GAAGAAGTCGTCGTCGGGGA 61.581 60.000 1.55 0.00 37.69 4.81
3886 5857 1.174712 AAGAAGTCGTCGTCGGGGAA 61.175 55.000 1.55 0.00 37.69 3.97
3887 5858 1.154073 GAAGTCGTCGTCGGGGAAG 60.154 63.158 1.55 0.00 37.69 3.46
3888 5859 1.860484 GAAGTCGTCGTCGGGGAAGT 61.860 60.000 1.55 0.00 37.69 3.01
3889 5860 0.606401 AAGTCGTCGTCGGGGAAGTA 60.606 55.000 1.55 0.00 37.69 2.24
3890 5861 1.023513 AGTCGTCGTCGGGGAAGTAG 61.024 60.000 1.55 0.00 37.69 2.57
3891 5862 1.003355 TCGTCGTCGGGGAAGTAGT 60.003 57.895 1.55 0.00 37.69 2.73
3892 5863 0.606401 TCGTCGTCGGGGAAGTAGTT 60.606 55.000 1.55 0.00 37.69 2.24
3893 5864 0.455633 CGTCGTCGGGGAAGTAGTTG 60.456 60.000 0.00 0.00 0.00 3.16
3894 5865 0.600057 GTCGTCGGGGAAGTAGTTGT 59.400 55.000 0.00 0.00 0.00 3.32
3895 5866 0.883833 TCGTCGGGGAAGTAGTTGTC 59.116 55.000 0.00 0.00 0.00 3.18
3896 5867 0.455633 CGTCGGGGAAGTAGTTGTCG 60.456 60.000 0.00 0.00 0.00 4.35
3897 5868 0.108945 GTCGGGGAAGTAGTTGTCGG 60.109 60.000 0.00 0.00 0.00 4.79
3898 5869 1.447314 CGGGGAAGTAGTTGTCGGC 60.447 63.158 0.00 0.00 0.00 5.54
3899 5870 1.447314 GGGGAAGTAGTTGTCGGCG 60.447 63.158 0.00 0.00 0.00 6.46
3900 5871 1.588082 GGGAAGTAGTTGTCGGCGA 59.412 57.895 4.99 4.99 0.00 5.54
3901 5872 0.735287 GGGAAGTAGTTGTCGGCGAC 60.735 60.000 31.68 31.68 0.00 5.19
3902 5873 0.735287 GGAAGTAGTTGTCGGCGACC 60.735 60.000 34.28 21.22 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 5.413833 GGATGCTCATATTGGTTCCTACATG 59.586 44.000 0.00 0.00 0.00 3.21
107 108 2.090041 CGTCATCGAACGTTAAGTGTGG 59.910 50.000 0.00 0.00 39.71 4.17
137 140 5.460646 GGTCACCAAAACACATAACTCATG 58.539 41.667 0.00 0.00 40.78 3.07
205 233 9.875691 TCCAATATATCAATCTTTACATCTCGG 57.124 33.333 0.00 0.00 0.00 4.63
337 370 0.544223 GCTTCCCTCTTTCTCCCCTC 59.456 60.000 0.00 0.00 0.00 4.30
483 538 0.984230 CTCCTAGTCCAAGTTGGCCA 59.016 55.000 17.68 0.00 37.47 5.36
536 600 3.288381 AGGGGAGGAGGCTGGTCT 61.288 66.667 0.00 0.00 0.00 3.85
542 606 2.417719 TATAAAGGAGGGGAGGAGGC 57.582 55.000 0.00 0.00 0.00 4.70
602 682 1.302192 GGCACCTCACACGGCTAAA 60.302 57.895 0.00 0.00 0.00 1.85
642 725 1.762957 AGCACTACGGCAATATGACCT 59.237 47.619 0.00 0.00 35.83 3.85
721 804 3.312697 GCAAAGTGTCGAGGAAGAGTTTT 59.687 43.478 0.00 0.00 0.00 2.43
729 818 0.976641 ATCCAGCAAAGTGTCGAGGA 59.023 50.000 0.00 0.00 0.00 3.71
766 855 1.284982 GCACACGTTCAGCTCGATGT 61.285 55.000 0.00 0.00 0.00 3.06
888 978 1.207329 GAGAGTGTGTCCACATACCCC 59.793 57.143 3.07 0.00 44.39 4.95
894 984 1.841556 GGGGGAGAGTGTGTCCACA 60.842 63.158 0.00 0.00 44.39 4.17
921 1011 8.916062 CACAAGATCTATCTAGGAGATGCATAT 58.084 37.037 0.00 0.00 35.37 1.78
946 1036 6.045072 AGGAGTTGTTTCCATACGAATACA 57.955 37.500 0.00 0.00 39.84 2.29
949 1039 4.514401 GGAGGAGTTGTTTCCATACGAAT 58.486 43.478 0.00 0.00 39.84 3.34
950 1040 3.307199 GGGAGGAGTTGTTTCCATACGAA 60.307 47.826 0.00 0.00 39.84 3.85
958 1048 4.758165 TCGTTTAATGGGAGGAGTTGTTTC 59.242 41.667 0.00 0.00 0.00 2.78
963 1053 4.360951 TGTTCGTTTAATGGGAGGAGTT 57.639 40.909 0.00 0.00 0.00 3.01
964 1054 4.569719 ATGTTCGTTTAATGGGAGGAGT 57.430 40.909 0.00 0.00 0.00 3.85
980 1070 3.968649 TGCAGACTTTTCAGCAATGTTC 58.031 40.909 0.00 0.00 40.98 3.18
989 1079 9.814899 TTTTCTGAATTTATTGCAGACTTTTCA 57.185 25.926 0.00 0.00 38.30 2.69
1000 1090 7.165812 CGGGCTCGTATTTTTCTGAATTTATTG 59.834 37.037 0.00 0.00 0.00 1.90
1017 1107 1.138036 CGTGACAATCGGGCTCGTA 59.862 57.895 5.57 0.00 37.69 3.43
1018 1108 2.126071 CGTGACAATCGGGCTCGT 60.126 61.111 5.57 0.00 37.69 4.18
1019 1109 3.554692 GCGTGACAATCGGGCTCG 61.555 66.667 0.00 0.00 37.82 5.03
1023 1114 0.174845 TTCTAGGCGTGACAATCGGG 59.825 55.000 0.00 0.00 0.00 5.14
1024 1115 1.135083 AGTTCTAGGCGTGACAATCGG 60.135 52.381 0.00 0.00 0.00 4.18
1028 1119 1.001633 GGGAAGTTCTAGGCGTGACAA 59.998 52.381 2.25 0.00 0.00 3.18
1031 1122 1.601419 CCGGGAAGTTCTAGGCGTGA 61.601 60.000 2.25 0.00 0.00 4.35
1034 1125 2.356780 ACCCGGGAAGTTCTAGGCG 61.357 63.158 32.02 0.00 0.00 5.52
1036 1127 1.905512 CCACCCGGGAAGTTCTAGG 59.094 63.158 32.02 11.27 40.01 3.02
1053 1144 0.038166 TCTTGTGGTGGAATCAGCCC 59.962 55.000 0.00 0.00 40.42 5.19
1059 1150 8.057623 AGATGATTAGATTTCTTGTGGTGGAAT 58.942 33.333 0.00 0.00 0.00 3.01
1072 1163 9.979578 CTGAGTGTAGCTTAGATGATTAGATTT 57.020 33.333 0.00 0.00 33.08 2.17
1075 1166 8.526667 AACTGAGTGTAGCTTAGATGATTAGA 57.473 34.615 0.00 0.00 35.12 2.10
1080 1171 5.171476 GCAAACTGAGTGTAGCTTAGATGA 58.829 41.667 0.00 0.00 35.12 2.92
1086 1177 3.503748 GGATTGCAAACTGAGTGTAGCTT 59.496 43.478 1.71 0.00 32.99 3.74
1089 1180 3.189287 GGTGGATTGCAAACTGAGTGTAG 59.811 47.826 1.71 0.00 0.00 2.74
1098 1189 4.989279 ATATGTGAGGTGGATTGCAAAC 57.011 40.909 1.71 0.00 0.00 2.93
1122 1213 8.936864 CGGAAATTTCACTCTACTCTAATTGTT 58.063 33.333 19.49 0.00 0.00 2.83
1135 1226 4.759516 TTAAGCCACGGAAATTTCACTC 57.240 40.909 19.49 1.96 0.00 3.51
1136 1227 5.068591 AGTTTTAAGCCACGGAAATTTCACT 59.931 36.000 19.49 6.99 0.00 3.41
1165 1256 3.064079 CATTGGGAACGATGCTCGA 57.936 52.632 11.64 0.00 44.96 4.04
1197 1289 2.969443 GTGTCGTCACATTTTCCCTG 57.031 50.000 7.95 0.00 43.37 4.45
1209 1301 1.736645 CGACCCCATGTGTGTCGTC 60.737 63.158 16.30 0.00 44.96 4.20
1213 1305 1.671742 GAGACGACCCCATGTGTGT 59.328 57.895 0.00 0.00 0.00 3.72
1226 1634 2.223157 TGGAAACAAAAAGTGCGAGACG 60.223 45.455 0.00 0.00 37.44 4.18
1306 1714 1.352156 GGCTACTGTTCGAGCGGTTG 61.352 60.000 19.28 17.52 39.72 3.77
1310 1718 0.666274 TGTTGGCTACTGTTCGAGCG 60.666 55.000 0.01 0.00 39.72 5.03
1314 1722 4.142708 TGCAATTATGTTGGCTACTGTTCG 60.143 41.667 0.01 0.00 0.00 3.95
1319 1727 4.280819 ACCATGCAATTATGTTGGCTACT 58.719 39.130 0.00 0.00 36.18 2.57
1323 1731 3.796178 CGTAACCATGCAATTATGTTGGC 59.204 43.478 0.00 0.00 36.18 4.52
1324 1732 4.992688 ACGTAACCATGCAATTATGTTGG 58.007 39.130 0.00 0.00 37.72 3.77
1325 1733 8.338986 TGTATACGTAACCATGCAATTATGTTG 58.661 33.333 14.96 0.00 33.58 3.33
1332 1744 7.254185 CGTTTAGTGTATACGTAACCATGCAAT 60.254 37.037 0.00 0.00 0.00 3.56
1381 1793 2.108771 TGCGAGACAGCAGCACAA 59.891 55.556 0.00 0.00 42.92 3.33
1396 1808 4.939509 TTTTGCCGTTCTATAAGAGTGC 57.060 40.909 0.00 0.00 0.00 4.40
1406 1818 0.517316 GAGCGTGATTTTGCCGTTCT 59.483 50.000 0.00 0.00 0.00 3.01
1417 1829 2.766263 TCCAAGATAAGGTGAGCGTGAT 59.234 45.455 0.00 0.00 0.00 3.06
1425 1837 6.949352 ACATAAGCAATCCAAGATAAGGTG 57.051 37.500 0.00 0.00 0.00 4.00
1554 1969 0.868406 GTGCTGGAAAGAGGTGAACG 59.132 55.000 0.00 0.00 0.00 3.95
1557 1972 1.761174 GGGTGCTGGAAAGAGGTGA 59.239 57.895 0.00 0.00 0.00 4.02
1559 1974 2.750350 CGGGTGCTGGAAAGAGGT 59.250 61.111 0.00 0.00 0.00 3.85
1602 2023 7.621991 CAAAGTGTTATAGAAGGTGATTAGCG 58.378 38.462 0.00 0.00 0.00 4.26
1621 2042 0.524862 GCAGAGGTGATGGCAAAGTG 59.475 55.000 0.00 0.00 0.00 3.16
1623 2044 1.651240 CGGCAGAGGTGATGGCAAAG 61.651 60.000 0.00 0.00 43.01 2.77
1624 2045 1.675310 CGGCAGAGGTGATGGCAAA 60.675 57.895 0.00 0.00 43.01 3.68
1625 2046 2.046023 CGGCAGAGGTGATGGCAA 60.046 61.111 0.00 0.00 43.01 4.52
1627 2048 4.783621 TGCGGCAGAGGTGATGGC 62.784 66.667 0.00 0.00 39.69 4.40
1629 2050 1.725665 CAATGCGGCAGAGGTGATG 59.274 57.895 9.25 0.00 0.00 3.07
1630 2051 2.117156 GCAATGCGGCAGAGGTGAT 61.117 57.895 9.25 0.00 0.00 3.06
1632 2053 2.749044 AGCAATGCGGCAGAGGTG 60.749 61.111 9.25 5.17 35.83 4.00
1633 2054 2.437359 GAGCAATGCGGCAGAGGT 60.437 61.111 9.25 8.86 35.83 3.85
1635 2056 1.829349 GATCGAGCAATGCGGCAGAG 61.829 60.000 9.25 4.36 35.83 3.35
1636 2057 1.884464 GATCGAGCAATGCGGCAGA 60.884 57.895 9.25 0.00 35.83 4.26
1637 2058 2.630317 GATCGAGCAATGCGGCAG 59.370 61.111 9.25 0.00 35.83 4.85
1638 2059 3.264159 CGATCGAGCAATGCGGCA 61.264 61.111 10.26 4.58 35.83 5.69
1639 2060 4.005472 CCGATCGAGCAATGCGGC 62.005 66.667 18.66 0.00 35.17 6.53
1675 2101 2.362503 AGATGGTGGAGGTCGCGA 60.363 61.111 3.71 3.71 0.00 5.87
1680 2106 0.980231 GAGCAGGAGATGGTGGAGGT 60.980 60.000 0.00 0.00 40.53 3.85
1763 2198 3.414700 CACGTGCACCTTCTCGCC 61.415 66.667 12.15 0.00 0.00 5.54
2006 2519 4.214266 ATCGGGGCCATGCTGCAT 62.214 61.111 9.81 9.81 0.00 3.96
2152 2699 0.641275 TCGTTGTCGTTGTTGTGTCG 59.359 50.000 0.00 0.00 38.33 4.35
2187 2899 7.568134 GCATCAAAACAAAACAACAGCTATCAG 60.568 37.037 0.00 0.00 0.00 2.90
2378 3187 7.731882 ATTTCATGTGAATGATGCAACAAAA 57.268 28.000 0.00 0.00 33.54 2.44
2468 3289 1.510383 CTCAGCTGTCTGTCTCCCG 59.490 63.158 14.67 0.00 41.10 5.14
2519 3340 4.980805 GGCTTGCCGTCGACCACA 62.981 66.667 10.58 5.45 0.00 4.17
2568 3389 2.392662 TGAAACTGTCCCATGGCAAAA 58.607 42.857 6.09 0.00 0.00 2.44
2633 3480 8.663167 TCCTGATACCAAGACATGATTGATTAT 58.337 33.333 14.37 10.81 0.00 1.28
2634 3481 8.033178 TCCTGATACCAAGACATGATTGATTA 57.967 34.615 14.37 7.60 0.00 1.75
2669 3516 3.624861 CCTTGCAGATGTAAGCTTCGAAT 59.375 43.478 0.00 0.00 36.59 3.34
2673 3520 1.063174 CGCCTTGCAGATGTAAGCTTC 59.937 52.381 0.00 0.00 36.59 3.86
2731 3578 3.035173 TTCTCTGCCTCCATGCCCG 62.035 63.158 0.00 0.00 0.00 6.13
2736 3583 1.134580 CACATCGTTCTCTGCCTCCAT 60.135 52.381 0.00 0.00 0.00 3.41
2747 3594 1.153978 TCGGCCGTACACATCGTTC 60.154 57.895 27.15 0.00 0.00 3.95
2783 3630 1.858091 AATCTCGTCGATGGCATCAC 58.142 50.000 25.88 20.03 31.20 3.06
2814 3661 7.547697 TCAGTTATTATTATCACCATCCGGA 57.452 36.000 6.61 6.61 35.59 5.14
2835 3682 8.757877 TCCCCAAAAGGAAACATAATTTATCAG 58.242 33.333 0.00 0.00 38.24 2.90
2883 3731 4.278975 ACCTTGACAGAGAGATTGAACC 57.721 45.455 0.00 0.00 0.00 3.62
2899 3747 7.021196 CACAACCACTCGATTTATTAACCTTG 58.979 38.462 0.00 0.00 0.00 3.61
2948 3796 6.487668 TGGCTATTGATTCCATATGTCAACTG 59.512 38.462 8.85 6.75 34.98 3.16
2949 3797 6.604171 TGGCTATTGATTCCATATGTCAACT 58.396 36.000 8.85 3.47 34.98 3.16
2958 3806 4.263816 CCAGGATCTGGCTATTGATTCCAT 60.264 45.833 0.61 0.00 45.13 3.41
2973 3824 1.646447 TGTACTCCAGGTCCAGGATCT 59.354 52.381 2.98 0.00 33.99 2.75
2977 3828 0.179000 GCATGTACTCCAGGTCCAGG 59.821 60.000 0.00 0.00 0.00 4.45
2978 3829 1.137872 GAGCATGTACTCCAGGTCCAG 59.862 57.143 0.00 0.00 0.00 3.86
2979 3830 1.195115 GAGCATGTACTCCAGGTCCA 58.805 55.000 0.00 0.00 0.00 4.02
2980 3831 1.137872 CAGAGCATGTACTCCAGGTCC 59.862 57.143 0.00 0.00 37.39 4.46
2981 3832 1.827969 ACAGAGCATGTACTCCAGGTC 59.172 52.381 0.00 0.00 41.60 3.85
2982 3833 1.944177 ACAGAGCATGTACTCCAGGT 58.056 50.000 0.00 0.00 41.60 4.00
3008 3861 1.342174 ACTTTCCATGCTGCCTGTTTG 59.658 47.619 4.26 0.00 0.00 2.93
3012 3865 1.401931 CGAAACTTTCCATGCTGCCTG 60.402 52.381 0.00 0.00 0.00 4.85
3015 3868 0.598065 ACCGAAACTTTCCATGCTGC 59.402 50.000 0.00 0.00 0.00 5.25
3016 3869 1.200020 GGACCGAAACTTTCCATGCTG 59.800 52.381 0.00 0.00 0.00 4.41
3017 3870 1.073923 AGGACCGAAACTTTCCATGCT 59.926 47.619 0.00 0.00 0.00 3.79
3018 3871 1.468914 GAGGACCGAAACTTTCCATGC 59.531 52.381 0.00 0.00 0.00 4.06
3019 3872 3.059352 AGAGGACCGAAACTTTCCATG 57.941 47.619 0.00 0.00 0.00 3.66
3020 3873 4.081586 GTCTAGAGGACCGAAACTTTCCAT 60.082 45.833 0.00 0.00 38.93 3.41
3022 3875 3.510753 AGTCTAGAGGACCGAAACTTTCC 59.489 47.826 0.00 0.00 45.54 3.13
3065 3920 7.118535 ACAAACGTTTGCTTAAATTTCCAAACT 59.881 29.630 34.70 11.23 42.78 2.66
3066 3921 7.237871 ACAAACGTTTGCTTAAATTTCCAAAC 58.762 30.769 34.70 20.69 41.79 2.93
3068 3923 6.969828 ACAAACGTTTGCTTAAATTTCCAA 57.030 29.167 34.70 0.00 41.79 3.53
3069 3924 7.481642 TCTACAAACGTTTGCTTAAATTTCCA 58.518 30.769 34.70 8.19 41.79 3.53
3070 3925 7.917720 TCTACAAACGTTTGCTTAAATTTCC 57.082 32.000 34.70 0.00 41.79 3.13
3107 4722 6.259167 GTCAGTACGGCACCAATAAATGATAA 59.741 38.462 0.00 0.00 0.00 1.75
3110 4725 3.936453 GTCAGTACGGCACCAATAAATGA 59.064 43.478 0.00 0.00 0.00 2.57
3126 4741 6.483385 TTTCTGTTTTGTTCGTTGTCAGTA 57.517 33.333 0.00 0.00 0.00 2.74
3153 5072 1.135859 GCTTGCAAATGAGTCCAGTCG 60.136 52.381 0.00 0.00 0.00 4.18
3154 5073 1.881973 TGCTTGCAAATGAGTCCAGTC 59.118 47.619 0.00 0.00 0.00 3.51
3155 5074 1.985473 TGCTTGCAAATGAGTCCAGT 58.015 45.000 0.00 0.00 0.00 4.00
3156 5075 2.490509 TGATGCTTGCAAATGAGTCCAG 59.509 45.455 0.00 0.00 0.00 3.86
3157 5076 2.490509 CTGATGCTTGCAAATGAGTCCA 59.509 45.455 0.00 0.00 0.00 4.02
3163 5088 0.535335 AGGCCTGATGCTTGCAAATG 59.465 50.000 3.11 0.00 40.92 2.32
3184 5109 4.779489 AGGCCTGATGCTTTCCTTAAAAAT 59.221 37.500 3.11 0.00 40.92 1.82
3210 5139 2.510874 CAGTCGTTTGCGTGTTTCAAA 58.489 42.857 0.00 0.00 39.49 2.69
3245 5205 2.494059 GGTGCAGTCATGTTGTACACT 58.506 47.619 17.39 1.18 33.51 3.55
3286 5246 6.785337 TCTCCTAATAAATCTGGAACGTGA 57.215 37.500 0.00 0.00 0.00 4.35
3292 5252 8.974238 TCGTTTAGTTCTCCTAATAAATCTGGA 58.026 33.333 0.00 0.00 35.59 3.86
3299 5259 8.715088 GCTTGTTTCGTTTAGTTCTCCTAATAA 58.285 33.333 0.00 0.00 35.59 1.40
3301 5261 6.128634 CGCTTGTTTCGTTTAGTTCTCCTAAT 60.129 38.462 0.00 0.00 35.59 1.73
3302 5262 5.176223 CGCTTGTTTCGTTTAGTTCTCCTAA 59.824 40.000 0.00 0.00 33.77 2.69
3314 5284 0.171455 TTTGCACCGCTTGTTTCGTT 59.829 45.000 0.00 0.00 0.00 3.85
3316 5286 0.524392 TGTTTGCACCGCTTGTTTCG 60.524 50.000 0.00 0.00 0.00 3.46
3340 5310 7.861872 TCATCAAAATGTATGTGAGTTGTGTTG 59.138 33.333 0.00 0.00 34.32 3.33
3364 5334 9.373603 ACTACGTACTGTTGCATTATAATTTCA 57.626 29.630 0.00 0.00 0.00 2.69
3367 5337 8.961092 CGTACTACGTACTGTTGCATTATAATT 58.039 33.333 0.09 0.00 36.93 1.40
3368 5338 7.113965 GCGTACTACGTACTGTTGCATTATAAT 59.886 37.037 10.23 0.00 44.73 1.28
3369 5339 6.414694 GCGTACTACGTACTGTTGCATTATAA 59.585 38.462 10.23 0.00 44.73 0.98
3370 5340 5.909054 GCGTACTACGTACTGTTGCATTATA 59.091 40.000 10.23 0.00 44.73 0.98
3371 5341 4.736793 GCGTACTACGTACTGTTGCATTAT 59.263 41.667 10.23 0.00 44.73 1.28
3372 5342 4.097714 GCGTACTACGTACTGTTGCATTA 58.902 43.478 10.23 0.00 44.73 1.90
3431 5401 2.631428 CCGTTGTCACGCCAGTTG 59.369 61.111 0.00 0.00 45.72 3.16
3432 5402 3.276846 GCCGTTGTCACGCCAGTT 61.277 61.111 0.00 0.00 45.72 3.16
3514 5485 4.327898 TGCTCGTATTTCAACATACCGTTC 59.672 41.667 0.00 0.00 34.86 3.95
3515 5486 4.247258 TGCTCGTATTTCAACATACCGTT 58.753 39.130 0.00 0.00 38.83 4.44
3521 5492 7.915508 TCGATAAATTGCTCGTATTTCAACAT 58.084 30.769 9.07 0.00 36.33 2.71
3522 5493 7.297229 TCGATAAATTGCTCGTATTTCAACA 57.703 32.000 9.07 0.00 36.33 3.33
3523 5494 8.673275 CATTCGATAAATTGCTCGTATTTCAAC 58.327 33.333 9.07 0.00 36.33 3.18
3524 5495 8.608317 TCATTCGATAAATTGCTCGTATTTCAA 58.392 29.630 9.07 0.00 36.33 2.69
3525 5496 8.137210 TCATTCGATAAATTGCTCGTATTTCA 57.863 30.769 9.07 0.00 36.33 2.69
3526 5497 9.599322 AATCATTCGATAAATTGCTCGTATTTC 57.401 29.630 9.07 0.00 36.33 2.17
3527 5498 9.950680 AAATCATTCGATAAATTGCTCGTATTT 57.049 25.926 9.07 8.46 36.33 1.40
3528 5499 9.950680 AAAATCATTCGATAAATTGCTCGTATT 57.049 25.926 9.07 4.44 36.33 1.89
3531 5502 9.950680 AATAAAATCATTCGATAAATTGCTCGT 57.049 25.926 9.07 0.00 36.33 4.18
3558 5529 9.331282 GGTCATGCTTTATCTAGTATTTCTGTT 57.669 33.333 0.00 0.00 0.00 3.16
3559 5530 8.486210 TGGTCATGCTTTATCTAGTATTTCTGT 58.514 33.333 0.00 0.00 0.00 3.41
3560 5531 8.893219 TGGTCATGCTTTATCTAGTATTTCTG 57.107 34.615 0.00 0.00 0.00 3.02
3561 5532 8.709308 ACTGGTCATGCTTTATCTAGTATTTCT 58.291 33.333 0.00 0.00 0.00 2.52
3562 5533 8.894768 ACTGGTCATGCTTTATCTAGTATTTC 57.105 34.615 0.00 0.00 0.00 2.17
3566 5537 9.809395 ACTATACTGGTCATGCTTTATCTAGTA 57.191 33.333 0.00 0.00 0.00 1.82
3567 5538 8.580720 CACTATACTGGTCATGCTTTATCTAGT 58.419 37.037 0.00 0.00 0.00 2.57
3568 5539 8.031864 CCACTATACTGGTCATGCTTTATCTAG 58.968 40.741 0.00 0.00 0.00 2.43
3569 5540 7.509318 ACCACTATACTGGTCATGCTTTATCTA 59.491 37.037 0.00 0.00 40.91 1.98
3570 5541 6.327626 ACCACTATACTGGTCATGCTTTATCT 59.672 38.462 0.00 0.00 40.91 1.98
3571 5542 6.425114 CACCACTATACTGGTCATGCTTTATC 59.575 42.308 1.36 0.00 43.15 1.75
3572 5543 6.099701 TCACCACTATACTGGTCATGCTTTAT 59.900 38.462 1.36 0.00 43.15 1.40
3573 5544 5.423931 TCACCACTATACTGGTCATGCTTTA 59.576 40.000 1.36 0.00 43.15 1.85
3574 5545 4.225042 TCACCACTATACTGGTCATGCTTT 59.775 41.667 1.36 0.00 43.15 3.51
3575 5546 3.774766 TCACCACTATACTGGTCATGCTT 59.225 43.478 1.36 0.00 43.15 3.91
3576 5547 3.374764 TCACCACTATACTGGTCATGCT 58.625 45.455 1.36 0.00 43.15 3.79
3577 5548 3.819564 TCACCACTATACTGGTCATGC 57.180 47.619 1.36 0.00 43.15 4.06
3578 5549 7.768582 TGTTTTATCACCACTATACTGGTCATG 59.231 37.037 1.36 0.00 43.15 3.07
3579 5550 7.857456 TGTTTTATCACCACTATACTGGTCAT 58.143 34.615 1.36 0.00 43.15 3.06
3580 5551 7.247456 TGTTTTATCACCACTATACTGGTCA 57.753 36.000 1.36 0.00 43.15 4.02
3581 5552 8.038944 TCTTGTTTTATCACCACTATACTGGTC 58.961 37.037 1.36 0.00 43.15 4.02
3582 5553 7.822822 GTCTTGTTTTATCACCACTATACTGGT 59.177 37.037 0.00 0.00 46.18 4.00
3583 5554 7.822334 TGTCTTGTTTTATCACCACTATACTGG 59.178 37.037 0.00 0.00 37.33 4.00
3584 5555 8.771920 TGTCTTGTTTTATCACCACTATACTG 57.228 34.615 0.00 0.00 0.00 2.74
3585 5556 9.383519 CATGTCTTGTTTTATCACCACTATACT 57.616 33.333 0.00 0.00 0.00 2.12
3586 5557 8.122952 GCATGTCTTGTTTTATCACCACTATAC 58.877 37.037 0.00 0.00 0.00 1.47
3587 5558 7.011016 CGCATGTCTTGTTTTATCACCACTATA 59.989 37.037 0.00 0.00 0.00 1.31
3588 5559 6.183360 CGCATGTCTTGTTTTATCACCACTAT 60.183 38.462 0.00 0.00 0.00 2.12
3589 5560 5.121611 CGCATGTCTTGTTTTATCACCACTA 59.878 40.000 0.00 0.00 0.00 2.74
3590 5561 4.083324 CGCATGTCTTGTTTTATCACCACT 60.083 41.667 0.00 0.00 0.00 4.00
3591 5562 4.083537 TCGCATGTCTTGTTTTATCACCAC 60.084 41.667 0.00 0.00 0.00 4.16
3592 5563 4.068599 TCGCATGTCTTGTTTTATCACCA 58.931 39.130 0.00 0.00 0.00 4.17
3593 5564 4.678509 TCGCATGTCTTGTTTTATCACC 57.321 40.909 0.00 0.00 0.00 4.02
3594 5565 6.801377 TCAAATCGCATGTCTTGTTTTATCAC 59.199 34.615 0.00 0.00 0.00 3.06
3595 5566 6.801377 GTCAAATCGCATGTCTTGTTTTATCA 59.199 34.615 0.00 0.00 0.00 2.15
3596 5567 6.801377 TGTCAAATCGCATGTCTTGTTTTATC 59.199 34.615 0.00 0.00 0.00 1.75
3597 5568 6.676950 TGTCAAATCGCATGTCTTGTTTTAT 58.323 32.000 0.00 0.00 0.00 1.40
3598 5569 6.066054 TGTCAAATCGCATGTCTTGTTTTA 57.934 33.333 0.00 0.00 0.00 1.52
3599 5570 4.930963 TGTCAAATCGCATGTCTTGTTTT 58.069 34.783 0.00 0.00 0.00 2.43
3600 5571 4.566545 TGTCAAATCGCATGTCTTGTTT 57.433 36.364 0.00 0.00 0.00 2.83
3601 5572 4.566545 TTGTCAAATCGCATGTCTTGTT 57.433 36.364 0.00 0.00 0.00 2.83
3602 5573 4.275689 TCTTTGTCAAATCGCATGTCTTGT 59.724 37.500 0.00 0.00 0.00 3.16
3603 5574 4.786507 TCTTTGTCAAATCGCATGTCTTG 58.213 39.130 0.00 0.00 0.00 3.02
3604 5575 5.437289 TTCTTTGTCAAATCGCATGTCTT 57.563 34.783 0.00 0.00 0.00 3.01
3605 5576 5.437289 TTTCTTTGTCAAATCGCATGTCT 57.563 34.783 0.00 0.00 0.00 3.41
3606 5577 5.117592 CCTTTTCTTTGTCAAATCGCATGTC 59.882 40.000 0.00 0.00 0.00 3.06
3607 5578 4.984161 CCTTTTCTTTGTCAAATCGCATGT 59.016 37.500 0.00 0.00 0.00 3.21
3608 5579 4.984161 ACCTTTTCTTTGTCAAATCGCATG 59.016 37.500 0.00 0.00 0.00 4.06
3609 5580 5.200368 ACCTTTTCTTTGTCAAATCGCAT 57.800 34.783 0.00 0.00 0.00 4.73
3610 5581 4.647424 ACCTTTTCTTTGTCAAATCGCA 57.353 36.364 0.00 0.00 0.00 5.10
3611 5582 6.474102 TGTTTACCTTTTCTTTGTCAAATCGC 59.526 34.615 0.00 0.00 0.00 4.58
3612 5583 7.979115 TGTTTACCTTTTCTTTGTCAAATCG 57.021 32.000 0.00 0.00 0.00 3.34
3613 5584 9.528018 TGATGTTTACCTTTTCTTTGTCAAATC 57.472 29.630 0.00 0.00 0.00 2.17
3615 5586 9.528018 GATGATGTTTACCTTTTCTTTGTCAAA 57.472 29.630 0.00 0.00 0.00 2.69
3616 5587 8.912988 AGATGATGTTTACCTTTTCTTTGTCAA 58.087 29.630 0.00 0.00 0.00 3.18
3617 5588 8.463930 AGATGATGTTTACCTTTTCTTTGTCA 57.536 30.769 0.00 0.00 0.00 3.58
3618 5589 9.399403 GAAGATGATGTTTACCTTTTCTTTGTC 57.601 33.333 0.00 0.00 0.00 3.18
3619 5590 8.912988 TGAAGATGATGTTTACCTTTTCTTTGT 58.087 29.630 0.00 0.00 0.00 2.83
3620 5591 9.918630 ATGAAGATGATGTTTACCTTTTCTTTG 57.081 29.630 0.00 0.00 0.00 2.77
3668 5639 9.062524 CAACTTGCTATACTGTCTACTCTAGAT 57.937 37.037 0.00 0.00 37.13 1.98
3669 5640 7.012515 GCAACTTGCTATACTGTCTACTCTAGA 59.987 40.741 6.50 0.00 40.96 2.43
3670 5641 7.136119 GCAACTTGCTATACTGTCTACTCTAG 58.864 42.308 6.50 0.00 40.96 2.43
3671 5642 6.602009 TGCAACTTGCTATACTGTCTACTCTA 59.398 38.462 14.78 0.00 45.31 2.43
3672 5643 5.419155 TGCAACTTGCTATACTGTCTACTCT 59.581 40.000 14.78 0.00 45.31 3.24
3673 5644 5.651530 TGCAACTTGCTATACTGTCTACTC 58.348 41.667 14.78 0.00 45.31 2.59
3674 5645 5.661056 TGCAACTTGCTATACTGTCTACT 57.339 39.130 14.78 0.00 45.31 2.57
3675 5646 9.862371 ATATATGCAACTTGCTATACTGTCTAC 57.138 33.333 14.78 0.00 45.31 2.59
3676 5647 9.860898 CATATATGCAACTTGCTATACTGTCTA 57.139 33.333 14.78 2.22 45.31 2.59
3677 5648 8.588472 TCATATATGCAACTTGCTATACTGTCT 58.412 33.333 14.78 0.41 45.31 3.41
3678 5649 8.763049 TCATATATGCAACTTGCTATACTGTC 57.237 34.615 14.78 0.00 45.31 3.51
3679 5650 9.559732 TTTCATATATGCAACTTGCTATACTGT 57.440 29.630 14.78 0.00 45.31 3.55
3686 5657 8.915057 ACTCTATTTCATATATGCAACTTGCT 57.085 30.769 14.78 3.57 45.31 3.91
3687 5658 8.997323 AGACTCTATTTCATATATGCAACTTGC 58.003 33.333 7.92 6.82 45.29 4.01
3701 5672 8.585881 GCCCTACATATGTTAGACTCTATTTCA 58.414 37.037 14.77 0.00 0.00 2.69
3702 5673 8.585881 TGCCCTACATATGTTAGACTCTATTTC 58.414 37.037 14.77 0.00 0.00 2.17
3703 5674 8.492415 TGCCCTACATATGTTAGACTCTATTT 57.508 34.615 14.77 0.00 0.00 1.40
3704 5675 8.492415 TTGCCCTACATATGTTAGACTCTATT 57.508 34.615 14.77 0.00 0.00 1.73
3705 5676 8.492415 TTTGCCCTACATATGTTAGACTCTAT 57.508 34.615 14.77 0.00 0.00 1.98
3706 5677 7.907841 TTTGCCCTACATATGTTAGACTCTA 57.092 36.000 14.77 0.00 0.00 2.43
3707 5678 6.808321 TTTGCCCTACATATGTTAGACTCT 57.192 37.500 14.77 0.00 0.00 3.24
3708 5679 9.726438 AATATTTGCCCTACATATGTTAGACTC 57.274 33.333 14.77 0.17 0.00 3.36
3714 5685 9.860650 TGTTCTAATATTTGCCCTACATATGTT 57.139 29.630 14.77 0.00 0.00 2.71
3715 5686 9.860650 TTGTTCTAATATTTGCCCTACATATGT 57.139 29.630 13.93 13.93 0.00 2.29
3719 5690 9.474313 TTTCTTGTTCTAATATTTGCCCTACAT 57.526 29.630 0.00 0.00 0.00 2.29
3720 5691 8.736244 GTTTCTTGTTCTAATATTTGCCCTACA 58.264 33.333 0.00 0.00 0.00 2.74
3721 5692 8.957466 AGTTTCTTGTTCTAATATTTGCCCTAC 58.043 33.333 0.00 0.00 0.00 3.18
3722 5693 8.956426 CAGTTTCTTGTTCTAATATTTGCCCTA 58.044 33.333 0.00 0.00 0.00 3.53
3723 5694 7.451566 ACAGTTTCTTGTTCTAATATTTGCCCT 59.548 33.333 0.00 0.00 0.00 5.19
3724 5695 7.602753 ACAGTTTCTTGTTCTAATATTTGCCC 58.397 34.615 0.00 0.00 0.00 5.36
3725 5696 9.774742 CTACAGTTTCTTGTTCTAATATTTGCC 57.225 33.333 0.00 0.00 32.56 4.52
3726 5697 9.278734 GCTACAGTTTCTTGTTCTAATATTTGC 57.721 33.333 0.00 0.00 32.56 3.68
3729 5700 9.167311 CCTGCTACAGTTTCTTGTTCTAATATT 57.833 33.333 0.00 0.00 32.56 1.28
3730 5701 8.540388 TCCTGCTACAGTTTCTTGTTCTAATAT 58.460 33.333 0.00 0.00 32.56 1.28
3731 5702 7.817962 GTCCTGCTACAGTTTCTTGTTCTAATA 59.182 37.037 0.00 0.00 32.56 0.98
3732 5703 6.651225 GTCCTGCTACAGTTTCTTGTTCTAAT 59.349 38.462 0.00 0.00 32.56 1.73
3733 5704 5.989777 GTCCTGCTACAGTTTCTTGTTCTAA 59.010 40.000 0.00 0.00 32.56 2.10
3734 5705 5.510861 GGTCCTGCTACAGTTTCTTGTTCTA 60.511 44.000 0.00 0.00 32.56 2.10
3735 5706 4.381411 GTCCTGCTACAGTTTCTTGTTCT 58.619 43.478 0.00 0.00 32.56 3.01
3736 5707 3.498777 GGTCCTGCTACAGTTTCTTGTTC 59.501 47.826 0.00 0.00 32.56 3.18
3737 5708 3.136626 AGGTCCTGCTACAGTTTCTTGTT 59.863 43.478 0.00 0.00 32.56 2.83
3738 5709 2.706190 AGGTCCTGCTACAGTTTCTTGT 59.294 45.455 0.00 0.00 35.09 3.16
3739 5710 3.007398 AGAGGTCCTGCTACAGTTTCTTG 59.993 47.826 0.00 0.00 0.00 3.02
3740 5711 3.243724 AGAGGTCCTGCTACAGTTTCTT 58.756 45.455 0.00 0.00 0.00 2.52
3741 5712 2.896039 AGAGGTCCTGCTACAGTTTCT 58.104 47.619 0.00 0.00 0.00 2.52
3742 5713 4.803098 TTAGAGGTCCTGCTACAGTTTC 57.197 45.455 0.00 0.00 0.00 2.78
3743 5714 6.195700 TCTATTAGAGGTCCTGCTACAGTTT 58.804 40.000 0.00 0.00 0.00 2.66
3744 5715 5.767670 TCTATTAGAGGTCCTGCTACAGTT 58.232 41.667 0.00 0.00 0.00 3.16
3745 5716 5.390087 TCTATTAGAGGTCCTGCTACAGT 57.610 43.478 0.00 0.00 0.00 3.55
3746 5717 6.239176 CCTTTCTATTAGAGGTCCTGCTACAG 60.239 46.154 0.00 0.00 0.00 2.74
3747 5718 5.598830 CCTTTCTATTAGAGGTCCTGCTACA 59.401 44.000 0.00 0.00 0.00 2.74
3748 5719 5.834204 TCCTTTCTATTAGAGGTCCTGCTAC 59.166 44.000 0.00 0.00 32.33 3.58
3749 5720 6.027025 TCCTTTCTATTAGAGGTCCTGCTA 57.973 41.667 0.00 0.00 32.33 3.49
3750 5721 4.884961 TCCTTTCTATTAGAGGTCCTGCT 58.115 43.478 0.00 0.00 32.33 4.24
3751 5722 4.896482 TCTCCTTTCTATTAGAGGTCCTGC 59.104 45.833 0.00 0.00 32.33 4.85
3752 5723 6.836527 TCTTCTCCTTTCTATTAGAGGTCCTG 59.163 42.308 0.00 0.00 32.33 3.86
3753 5724 6.987557 TCTTCTCCTTTCTATTAGAGGTCCT 58.012 40.000 0.00 0.00 32.33 3.85
3754 5725 7.124448 TGTTCTTCTCCTTTCTATTAGAGGTCC 59.876 40.741 0.00 0.00 32.33 4.46
3755 5726 7.977293 GTGTTCTTCTCCTTTCTATTAGAGGTC 59.023 40.741 0.00 0.00 32.33 3.85
3756 5727 7.363094 CGTGTTCTTCTCCTTTCTATTAGAGGT 60.363 40.741 0.00 0.00 32.33 3.85
3757 5728 6.975772 CGTGTTCTTCTCCTTTCTATTAGAGG 59.024 42.308 0.00 0.00 0.00 3.69
3758 5729 7.540299 ACGTGTTCTTCTCCTTTCTATTAGAG 58.460 38.462 0.00 0.00 0.00 2.43
3759 5730 7.463961 ACGTGTTCTTCTCCTTTCTATTAGA 57.536 36.000 0.00 0.00 0.00 2.10
3760 5731 7.428761 CGTACGTGTTCTTCTCCTTTCTATTAG 59.571 40.741 7.22 0.00 0.00 1.73
3761 5732 7.246311 CGTACGTGTTCTTCTCCTTTCTATTA 58.754 38.462 7.22 0.00 0.00 0.98
3762 5733 6.091437 CGTACGTGTTCTTCTCCTTTCTATT 58.909 40.000 7.22 0.00 0.00 1.73
3763 5734 5.392811 CCGTACGTGTTCTTCTCCTTTCTAT 60.393 44.000 15.21 0.00 0.00 1.98
3764 5735 4.083110 CCGTACGTGTTCTTCTCCTTTCTA 60.083 45.833 15.21 0.00 0.00 2.10
3765 5736 3.305199 CCGTACGTGTTCTTCTCCTTTCT 60.305 47.826 15.21 0.00 0.00 2.52
3766 5737 2.985139 CCGTACGTGTTCTTCTCCTTTC 59.015 50.000 15.21 0.00 0.00 2.62
3767 5738 2.288640 CCCGTACGTGTTCTTCTCCTTT 60.289 50.000 15.21 0.00 0.00 3.11
3768 5739 1.271656 CCCGTACGTGTTCTTCTCCTT 59.728 52.381 15.21 0.00 0.00 3.36
3769 5740 0.886563 CCCGTACGTGTTCTTCTCCT 59.113 55.000 15.21 0.00 0.00 3.69
3770 5741 0.883833 TCCCGTACGTGTTCTTCTCC 59.116 55.000 15.21 0.00 0.00 3.71
3771 5742 1.267806 TGTCCCGTACGTGTTCTTCTC 59.732 52.381 15.21 0.00 0.00 2.87
3772 5743 1.268899 CTGTCCCGTACGTGTTCTTCT 59.731 52.381 15.21 0.00 0.00 2.85
3773 5744 1.694639 CTGTCCCGTACGTGTTCTTC 58.305 55.000 15.21 0.00 0.00 2.87
3774 5745 0.319297 GCTGTCCCGTACGTGTTCTT 60.319 55.000 15.21 0.00 0.00 2.52
3775 5746 1.288127 GCTGTCCCGTACGTGTTCT 59.712 57.895 15.21 0.00 0.00 3.01
3776 5747 1.007038 TGCTGTCCCGTACGTGTTC 60.007 57.895 15.21 1.93 0.00 3.18
3777 5748 1.006571 CTGCTGTCCCGTACGTGTT 60.007 57.895 15.21 0.00 0.00 3.32
3778 5749 2.649034 CTGCTGTCCCGTACGTGT 59.351 61.111 15.21 0.00 0.00 4.49
3779 5750 2.809601 GCTGCTGTCCCGTACGTG 60.810 66.667 15.21 2.17 0.00 4.49
3780 5751 3.282745 CTGCTGCTGTCCCGTACGT 62.283 63.158 15.21 0.00 0.00 3.57
3781 5752 2.507102 CTGCTGCTGTCCCGTACG 60.507 66.667 8.69 8.69 0.00 3.67
3782 5753 2.815647 GCTGCTGCTGTCCCGTAC 60.816 66.667 8.53 0.00 36.03 3.67
3783 5754 3.300934 CTGCTGCTGCTGTCCCGTA 62.301 63.158 17.00 0.00 40.48 4.02
3784 5755 4.694233 CTGCTGCTGCTGTCCCGT 62.694 66.667 17.00 0.00 40.48 5.28
3785 5756 3.889134 TTCTGCTGCTGCTGTCCCG 62.889 63.158 17.00 0.00 40.48 5.14
3786 5757 2.033141 TTCTGCTGCTGCTGTCCC 59.967 61.111 17.00 0.00 40.48 4.46
3787 5758 2.688794 GCTTCTGCTGCTGCTGTCC 61.689 63.158 17.00 5.76 40.48 4.02
3788 5759 2.868920 GCTTCTGCTGCTGCTGTC 59.131 61.111 17.00 6.73 40.48 3.51
3789 5760 3.048475 CGCTTCTGCTGCTGCTGT 61.048 61.111 17.00 0.00 40.48 4.40
3790 5761 4.462417 GCGCTTCTGCTGCTGCTG 62.462 66.667 17.00 15.94 40.48 4.41
3791 5762 4.701290 AGCGCTTCTGCTGCTGCT 62.701 61.111 17.00 0.00 45.28 4.24
3798 5769 2.684843 CCAAGTCCAGCGCTTCTGC 61.685 63.158 7.50 0.00 41.50 4.26
3799 5770 2.037136 CCCAAGTCCAGCGCTTCTG 61.037 63.158 7.50 0.00 42.49 3.02
3800 5771 2.348998 CCCAAGTCCAGCGCTTCT 59.651 61.111 7.50 3.60 0.00 2.85
3801 5772 2.747855 CCCCAAGTCCAGCGCTTC 60.748 66.667 7.50 0.75 0.00 3.86
3802 5773 3.553095 GACCCCAAGTCCAGCGCTT 62.553 63.158 7.50 0.00 39.84 4.68
3803 5774 4.021925 GACCCCAAGTCCAGCGCT 62.022 66.667 2.64 2.64 39.84 5.92
3805 5776 4.760047 CCGACCCCAAGTCCAGCG 62.760 72.222 0.00 0.00 43.08 5.18
3806 5777 3.637273 ACCGACCCCAAGTCCAGC 61.637 66.667 0.00 0.00 43.08 4.85
3807 5778 2.347490 CACCGACCCCAAGTCCAG 59.653 66.667 0.00 0.00 43.08 3.86
3808 5779 2.446994 ACACCGACCCCAAGTCCA 60.447 61.111 0.00 0.00 43.08 4.02
3809 5780 2.346365 GACACCGACCCCAAGTCC 59.654 66.667 0.00 0.00 43.08 3.85
3810 5781 2.168666 GAGGACACCGACCCCAAGTC 62.169 65.000 0.00 0.00 42.54 3.01
3811 5782 2.122547 AGGACACCGACCCCAAGT 60.123 61.111 0.00 0.00 0.00 3.16
3812 5783 2.663196 GAGGACACCGACCCCAAG 59.337 66.667 0.00 0.00 0.00 3.61
3813 5784 3.307906 CGAGGACACCGACCCCAA 61.308 66.667 0.00 0.00 0.00 4.12
3817 5788 4.436998 CAGGCGAGGACACCGACC 62.437 72.222 0.00 0.00 35.21 4.79
3821 5792 4.101448 ATGGCAGGCGAGGACACC 62.101 66.667 0.00 0.00 0.00 4.16
3822 5793 2.821366 CATGGCAGGCGAGGACAC 60.821 66.667 0.00 0.00 0.00 3.67
3823 5794 3.315142 GACATGGCAGGCGAGGACA 62.315 63.158 0.00 0.00 0.00 4.02
3824 5795 2.512515 GACATGGCAGGCGAGGAC 60.513 66.667 0.00 0.00 0.00 3.85
3825 5796 2.315781 GATGACATGGCAGGCGAGGA 62.316 60.000 7.63 0.00 0.00 3.71
3826 5797 1.890979 GATGACATGGCAGGCGAGG 60.891 63.158 7.63 0.00 0.00 4.63
3827 5798 2.242572 CGATGACATGGCAGGCGAG 61.243 63.158 18.76 0.00 0.00 5.03
3828 5799 2.202919 CGATGACATGGCAGGCGA 60.203 61.111 18.76 0.00 0.00 5.54
3829 5800 2.202919 TCGATGACATGGCAGGCG 60.203 61.111 17.77 17.77 0.00 5.52
3830 5801 1.890979 CCTCGATGACATGGCAGGC 60.891 63.158 7.63 0.00 0.00 4.85
3831 5802 0.249784 CTCCTCGATGACATGGCAGG 60.250 60.000 7.63 2.18 0.00 4.85
3832 5803 0.249784 CCTCCTCGATGACATGGCAG 60.250 60.000 7.63 0.00 0.00 4.85
3833 5804 0.977627 ACCTCCTCGATGACATGGCA 60.978 55.000 2.18 2.18 0.00 4.92
3834 5805 0.249657 GACCTCCTCGATGACATGGC 60.250 60.000 0.00 0.00 0.00 4.40
3835 5806 0.031314 CGACCTCCTCGATGACATGG 59.969 60.000 0.00 0.00 46.14 3.66
3836 5807 0.741326 ACGACCTCCTCGATGACATG 59.259 55.000 0.00 0.00 46.14 3.21
3837 5808 0.741326 CACGACCTCCTCGATGACAT 59.259 55.000 0.00 0.00 46.14 3.06
3838 5809 1.313091 CCACGACCTCCTCGATGACA 61.313 60.000 0.00 0.00 46.14 3.58
3839 5810 1.030488 TCCACGACCTCCTCGATGAC 61.030 60.000 0.00 0.00 46.14 3.06
3840 5811 1.030488 GTCCACGACCTCCTCGATGA 61.030 60.000 0.00 0.00 46.14 2.92
3841 5812 1.433879 GTCCACGACCTCCTCGATG 59.566 63.158 0.00 0.00 46.14 3.84
3842 5813 2.113433 CGTCCACGACCTCCTCGAT 61.113 63.158 0.00 0.00 46.14 3.59
3843 5814 2.745100 CGTCCACGACCTCCTCGA 60.745 66.667 0.00 0.00 46.14 4.04
3845 5816 2.876219 GACGTCCACGACCTCCTC 59.124 66.667 3.51 0.00 43.02 3.71
3846 5817 3.054503 CGACGTCCACGACCTCCT 61.055 66.667 10.58 0.00 43.02 3.69
3847 5818 4.112341 CCGACGTCCACGACCTCC 62.112 72.222 10.58 0.00 43.02 4.30
3848 5819 4.112341 CCCGACGTCCACGACCTC 62.112 72.222 10.58 0.00 43.02 3.85
3851 5822 3.621892 CTTCCCCGACGTCCACGAC 62.622 68.421 10.58 0.00 43.02 4.34
3852 5823 3.367743 CTTCCCCGACGTCCACGA 61.368 66.667 10.58 0.00 43.02 4.35
3853 5824 2.814183 CTTCTTCCCCGACGTCCACG 62.814 65.000 10.58 0.00 46.33 4.94
3854 5825 1.080025 CTTCTTCCCCGACGTCCAC 60.080 63.158 10.58 0.00 0.00 4.02
3855 5826 1.530013 GACTTCTTCCCCGACGTCCA 61.530 60.000 10.58 0.00 0.00 4.02
3856 5827 1.214853 GACTTCTTCCCCGACGTCC 59.785 63.158 10.58 0.00 0.00 4.79
3857 5828 1.154073 CGACTTCTTCCCCGACGTC 60.154 63.158 5.18 5.18 0.00 4.34
3858 5829 1.860484 GACGACTTCTTCCCCGACGT 61.860 60.000 0.00 0.00 35.31 4.34
3859 5830 1.154073 GACGACTTCTTCCCCGACG 60.154 63.158 0.00 0.00 0.00 5.12
3860 5831 1.154073 CGACGACTTCTTCCCCGAC 60.154 63.158 0.00 0.00 0.00 4.79
3861 5832 1.580845 GACGACGACTTCTTCCCCGA 61.581 60.000 0.00 0.00 0.00 5.14
3862 5833 1.154073 GACGACGACTTCTTCCCCG 60.154 63.158 0.00 0.00 0.00 5.73
3863 5834 1.154073 CGACGACGACTTCTTCCCC 60.154 63.158 0.00 0.00 42.66 4.81
3864 5835 1.154073 CCGACGACGACTTCTTCCC 60.154 63.158 9.28 0.00 42.66 3.97
3865 5836 1.154073 CCCGACGACGACTTCTTCC 60.154 63.158 9.28 0.00 42.66 3.46
3866 5837 1.154073 CCCCGACGACGACTTCTTC 60.154 63.158 9.28 0.00 42.66 2.87
3867 5838 1.174712 TTCCCCGACGACGACTTCTT 61.175 55.000 9.28 0.00 42.66 2.52
3868 5839 1.584380 CTTCCCCGACGACGACTTCT 61.584 60.000 9.28 0.00 42.66 2.85
3869 5840 1.154073 CTTCCCCGACGACGACTTC 60.154 63.158 9.28 0.00 42.66 3.01
3870 5841 0.606401 TACTTCCCCGACGACGACTT 60.606 55.000 9.28 0.00 42.66 3.01
3871 5842 1.003355 TACTTCCCCGACGACGACT 60.003 57.895 9.28 0.00 42.66 4.18
3872 5843 1.301677 ACTACTTCCCCGACGACGAC 61.302 60.000 9.28 0.00 42.66 4.34
3873 5844 0.606401 AACTACTTCCCCGACGACGA 60.606 55.000 9.28 0.00 42.66 4.20
3874 5845 0.455633 CAACTACTTCCCCGACGACG 60.456 60.000 0.00 0.00 39.43 5.12
3875 5846 0.600057 ACAACTACTTCCCCGACGAC 59.400 55.000 0.00 0.00 0.00 4.34
3876 5847 0.883833 GACAACTACTTCCCCGACGA 59.116 55.000 0.00 0.00 0.00 4.20
3877 5848 0.455633 CGACAACTACTTCCCCGACG 60.456 60.000 0.00 0.00 0.00 5.12
3878 5849 0.108945 CCGACAACTACTTCCCCGAC 60.109 60.000 0.00 0.00 0.00 4.79
3879 5850 1.880819 GCCGACAACTACTTCCCCGA 61.881 60.000 0.00 0.00 0.00 5.14
3880 5851 1.447314 GCCGACAACTACTTCCCCG 60.447 63.158 0.00 0.00 0.00 5.73
3881 5852 1.447314 CGCCGACAACTACTTCCCC 60.447 63.158 0.00 0.00 0.00 4.81
3882 5853 0.735287 GTCGCCGACAACTACTTCCC 60.735 60.000 13.23 0.00 32.09 3.97
3883 5854 0.735287 GGTCGCCGACAACTACTTCC 60.735 60.000 20.08 0.00 33.68 3.46
3884 5855 2.734379 GGTCGCCGACAACTACTTC 58.266 57.895 20.08 0.00 33.68 3.01
3885 5856 4.981415 GGTCGCCGACAACTACTT 57.019 55.556 20.08 0.00 33.68 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.