Multiple sequence alignment - TraesCS4A01G110800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G110800 chr4A 100.000 5555 0 0 1 5555 135354224 135359778 0.000000e+00 10259
1 TraesCS4A01G110800 chr4A 88.561 271 26 4 2740 3008 733632696 733632429 1.930000e-84 324
2 TraesCS4A01G110800 chr4A 85.294 272 36 4 2739 3008 708678250 708677981 1.520000e-70 278
3 TraesCS4A01G110800 chr4D 92.740 2562 121 30 3011 5555 337258462 337255949 0.000000e+00 3640
4 TraesCS4A01G110800 chr4D 95.115 1310 44 12 1452 2743 337259761 337258454 0.000000e+00 2047
5 TraesCS4A01G110800 chr4D 92.792 1318 49 17 1 1309 337261176 337259896 0.000000e+00 1866
6 TraesCS4A01G110800 chr4D 82.234 546 67 15 5027 5555 496090630 496091162 1.420000e-120 444
7 TraesCS4A01G110800 chr4D 86.784 227 25 3 5032 5257 33242313 33242091 1.190000e-61 248
8 TraesCS4A01G110800 chr4D 92.661 109 5 3 708 816 480824293 480824188 2.680000e-33 154
9 TraesCS4A01G110800 chr4B 94.083 2180 91 22 3011 5182 416438562 416436413 0.000000e+00 3277
10 TraesCS4A01G110800 chr4B 97.268 1208 29 4 1538 2743 416439759 416438554 0.000000e+00 2045
11 TraesCS4A01G110800 chr4B 89.524 1556 89 34 1 1508 416441289 416439760 0.000000e+00 1903
12 TraesCS4A01G110800 chr4B 86.170 376 34 12 5194 5555 416415894 416415523 1.880000e-104 390
13 TraesCS4A01G110800 chr4B 94.898 98 4 1 709 806 608669008 608668912 9.640000e-33 152
14 TraesCS4A01G110800 chr2D 83.153 463 54 15 5111 5555 7147111 7146655 8.670000e-108 401
15 TraesCS4A01G110800 chr2D 86.090 266 35 2 2739 3004 280645060 280644797 9.110000e-73 285
16 TraesCS4A01G110800 chr2D 84.091 264 33 6 5028 5288 339959118 339959375 4.300000e-61 246
17 TraesCS4A01G110800 chr7B 91.519 283 21 2 2732 3014 44574680 44574401 2.430000e-103 387
18 TraesCS4A01G110800 chr7B 85.778 225 25 6 5030 5252 22545859 22545640 1.200000e-56 231
19 TraesCS4A01G110800 chr1B 81.008 516 73 15 5055 5555 139675690 139676195 2.430000e-103 387
20 TraesCS4A01G110800 chr7A 89.630 270 26 2 2739 3007 323434116 323434384 5.330000e-90 342
21 TraesCS4A01G110800 chr7D 86.496 274 36 1 2737 3010 583280998 583280726 3.250000e-77 300
22 TraesCS4A01G110800 chr7D 86.567 268 33 3 2740 3006 587390311 587390046 5.440000e-75 292
23 TraesCS4A01G110800 chr5D 85.211 284 40 2 2734 3017 560037861 560038142 1.960000e-74 291
24 TraesCS4A01G110800 chr5D 86.900 229 25 3 5030 5257 457997585 457997809 9.240000e-63 252
25 TraesCS4A01G110800 chr5D 85.463 227 26 6 5032 5257 48051673 48051893 4.330000e-56 230
26 TraesCS4A01G110800 chr5D 94.898 98 5 0 710 807 302378386 302378483 2.680000e-33 154
27 TraesCS4A01G110800 chr5A 86.347 271 28 4 2740 3009 495304456 495304718 2.530000e-73 287
28 TraesCS4A01G110800 chr3D 85.281 231 28 6 5027 5255 525753127 525753353 3.350000e-57 233
29 TraesCS4A01G110800 chr3D 83.012 259 38 5 5032 5288 554393455 554393201 4.330000e-56 230
30 TraesCS4A01G110800 chr3B 85.973 221 24 5 5030 5248 32282498 32282283 4.330000e-56 230
31 TraesCS4A01G110800 chr6D 94.231 104 2 4 710 813 82588540 82588639 7.450000e-34 156
32 TraesCS4A01G110800 chr6D 94.231 104 2 4 710 813 82589113 82589212 7.450000e-34 156
33 TraesCS4A01G110800 chr6A 93.269 104 4 3 705 808 99206763 99206863 3.470000e-32 150
34 TraesCS4A01G110800 chr3A 91.743 109 5 2 706 814 46602854 46602958 1.250000e-31 148


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G110800 chr4A 135354224 135359778 5554 False 10259.000000 10259 100.000 1 5555 1 chr4A.!!$F1 5554
1 TraesCS4A01G110800 chr4D 337255949 337261176 5227 True 2517.666667 3640 93.549 1 5555 3 chr4D.!!$R3 5554
2 TraesCS4A01G110800 chr4D 496090630 496091162 532 False 444.000000 444 82.234 5027 5555 1 chr4D.!!$F1 528
3 TraesCS4A01G110800 chr4B 416436413 416441289 4876 True 2408.333333 3277 93.625 1 5182 3 chr4B.!!$R3 5181
4 TraesCS4A01G110800 chr1B 139675690 139676195 505 False 387.000000 387 81.008 5055 5555 1 chr1B.!!$F1 500

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
63 64 0.035056 CGGAGGCACAGGAGGAAAAT 60.035 55.0 0.0 0.0 0.0 1.82 F
795 819 1.025113 CCAGCAGCCACATCTCACTG 61.025 60.0 0.0 0.0 0.0 3.66 F
1206 1254 0.036732 GCAGGTGGTGGTGATTCTCA 59.963 55.0 0.0 0.0 0.0 3.27 F
2792 2896 0.037605 CAAGGGTGTCACGTAGGTCC 60.038 60.0 0.0 0.0 0.0 4.46 F
2973 3077 0.038526 GGACCTACGTGACACCTGTG 60.039 60.0 0.0 0.0 0.0 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1159 1207 0.032267 GTCCTCCTTAATCTCCGCGG 59.968 60.0 22.12 22.12 0.00 6.46 R
2773 2877 0.037605 GGACCTACGTGACACCCTTG 60.038 60.0 0.00 0.00 0.00 3.61 R
2954 3058 0.038526 CACAGGTGTCACGTAGGTCC 60.039 60.0 0.00 0.00 0.00 4.46 R
4379 4488 0.459411 GAGAAGCTTCTCGTCAGGGC 60.459 60.0 34.29 14.90 43.63 5.19 R
4919 5028 1.221466 CGTTCTTCGTGGCTTGCAGA 61.221 55.0 0.00 0.00 34.52 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 3.706373 GCGGAGGCACAGGAGGAA 61.706 66.667 0.00 0.00 39.62 3.36
61 62 3.068881 CGGAGGCACAGGAGGAAA 58.931 61.111 0.00 0.00 0.00 3.13
62 63 1.374947 CGGAGGCACAGGAGGAAAA 59.625 57.895 0.00 0.00 0.00 2.29
63 64 0.035056 CGGAGGCACAGGAGGAAAAT 60.035 55.000 0.00 0.00 0.00 1.82
202 203 3.296709 CTGGGCAAGTACGCGGAGT 62.297 63.158 12.47 0.00 0.00 3.85
247 248 2.266627 AAGAAGGGCTCGTCGTCGT 61.267 57.895 1.33 0.00 38.33 4.34
248 249 2.197643 AAGAAGGGCTCGTCGTCGTC 62.198 60.000 1.33 0.00 38.33 4.20
249 250 3.996744 GAAGGGCTCGTCGTCGTCG 62.997 68.421 5.50 5.50 38.33 5.12
453 454 2.504026 GACGTGCTCATCGTCGCA 60.504 61.111 0.00 0.00 45.64 5.10
579 598 7.345192 GTTCTGTAACAATAATGCCGTCTATG 58.655 38.462 0.00 0.00 35.56 2.23
583 602 7.446769 TGTAACAATAATGCCGTCTATGGTAT 58.553 34.615 0.00 0.00 35.68 2.73
584 603 6.801539 AACAATAATGCCGTCTATGGTATG 57.198 37.500 0.00 0.00 34.29 2.39
613 632 2.297033 GGCAGATTTTGAGCACAGGAAA 59.703 45.455 0.00 0.00 0.00 3.13
614 633 3.243839 GGCAGATTTTGAGCACAGGAAAA 60.244 43.478 0.00 0.00 0.00 2.29
639 659 6.542574 ACACCGTGATTGTACGAATTAAAA 57.457 33.333 5.28 0.00 46.46 1.52
700 724 5.517904 AGTGTTAAGTAACTCGTCTGTGTC 58.482 41.667 3.07 0.00 37.12 3.67
795 819 1.025113 CCAGCAGCCACATCTCACTG 61.025 60.000 0.00 0.00 0.00 3.66
802 833 3.067180 CAGCCACATCTCACTGTTTTTGT 59.933 43.478 0.00 0.00 0.00 2.83
810 841 9.520204 CACATCTCACTGTTTTTGTTTTTCTAT 57.480 29.630 0.00 0.00 0.00 1.98
1046 1090 2.278857 CGCTCCATCGACTTCCGG 60.279 66.667 0.00 0.00 39.14 5.14
1047 1091 2.771639 CGCTCCATCGACTTCCGGA 61.772 63.158 0.00 0.00 39.14 5.14
1064 1108 1.635817 GGAGCAGCCCCAGGTGATTA 61.636 60.000 0.00 0.00 40.90 1.75
1068 1112 1.410083 GCAGCCCCAGGTGATTATTGA 60.410 52.381 0.00 0.00 44.53 2.57
1071 1115 1.215423 GCCCCAGGTGATTATTGACCT 59.785 52.381 0.00 0.00 43.79 3.85
1072 1116 2.441750 GCCCCAGGTGATTATTGACCTA 59.558 50.000 0.00 0.00 40.85 3.08
1108 1152 3.164977 TCGAACCAGTGCCACCCA 61.165 61.111 0.00 0.00 0.00 4.51
1181 1229 1.033574 CGGAGATTAAGGAGGACGCT 58.966 55.000 0.00 0.00 0.00 5.07
1184 1232 2.032620 GAGATTAAGGAGGACGCTGGA 58.967 52.381 0.00 0.00 0.00 3.86
1206 1254 0.036732 GCAGGTGGTGGTGATTCTCA 59.963 55.000 0.00 0.00 0.00 3.27
1214 1262 0.982852 TGGTGATTCTCATCGGCCCT 60.983 55.000 0.00 0.00 27.66 5.19
1331 1379 1.846541 GCTCCATTCTCTCTACGTGC 58.153 55.000 0.00 0.00 0.00 5.34
1341 1389 4.424626 TCTCTCTACGTGCTAATTTGCTG 58.575 43.478 12.99 8.03 0.00 4.41
1342 1390 4.082190 TCTCTCTACGTGCTAATTTGCTGT 60.082 41.667 12.99 12.87 0.00 4.40
1345 1393 1.238439 ACGTGCTAATTTGCTGTGCT 58.762 45.000 12.99 0.00 0.00 4.40
1346 1394 1.069022 ACGTGCTAATTTGCTGTGCTG 60.069 47.619 12.99 0.12 0.00 4.41
1347 1395 1.343506 GTGCTAATTTGCTGTGCTGC 58.656 50.000 12.99 0.00 0.00 5.25
1370 1420 1.745489 ATTGCTTTCCGTCTCCGCC 60.745 57.895 0.00 0.00 0.00 6.13
1371 1421 3.894547 TTGCTTTCCGTCTCCGCCC 62.895 63.158 0.00 0.00 0.00 6.13
1387 1444 1.328680 CGCCCTGAATTTGATGTCTCG 59.671 52.381 0.00 0.00 0.00 4.04
1405 1462 4.324936 GTCTCGAGACAAGCATTCTGTAAC 59.675 45.833 34.97 7.30 44.18 2.50
1436 1493 2.485479 GGGCTCATCTGATTCGGCTTTA 60.485 50.000 8.67 0.00 0.00 1.85
1440 1497 5.393027 GGCTCATCTGATTCGGCTTTAAAAA 60.393 40.000 0.00 0.00 0.00 1.94
1454 1511 9.862371 TCGGCTTTAAAAATGCTTATATTTTGA 57.138 25.926 0.00 0.00 39.48 2.69
1479 1565 9.507280 GAATAATTTGTTACTGGATCACATGTG 57.493 33.333 20.18 20.18 0.00 3.21
1508 1594 6.859112 ACTGTAGTTTCAGTCTCATGGTAT 57.141 37.500 0.00 0.00 44.07 2.73
1549 1651 2.525055 CAAAAATGGCACCGGATAACG 58.475 47.619 9.46 0.00 43.80 3.18
1585 1687 7.461182 AAACACCGAAATCTTATTCCATGAA 57.539 32.000 0.00 0.00 0.00 2.57
1659 1762 2.217750 CCATGTCGTCAACCAAACTCA 58.782 47.619 0.00 0.00 0.00 3.41
1745 1848 3.832527 AGCTGGAACCAAAATACAGTGT 58.167 40.909 0.00 0.00 0.00 3.55
1849 1952 1.042229 TTTGTGAAGCTTGGCTGCAT 58.958 45.000 2.10 0.00 46.78 3.96
1982 2085 2.550487 GGTTGTGAACCGCATGCTA 58.450 52.632 17.13 0.00 42.62 3.49
2240 2343 3.297134 AGTGAAAGAAAGACAGGGCAA 57.703 42.857 0.00 0.00 0.00 4.52
2338 2441 5.500645 AACCTGAAGGAAAAAGAAGAACG 57.499 39.130 2.62 0.00 38.94 3.95
2350 2453 8.186163 GGAAAAAGAAGAACGAAGTAAGGAAAA 58.814 33.333 0.00 0.00 45.00 2.29
2417 2520 4.689612 TTCTACTGCTGACTTCCAGTTT 57.310 40.909 0.00 0.00 44.71 2.66
2720 2824 7.148340 GCAGGTTCTATCAAATGCAGATATACC 60.148 40.741 12.97 12.97 35.23 2.73
2758 2862 4.278956 GTGAAGTGCACGGGTAGG 57.721 61.111 12.01 0.00 37.83 3.18
2759 2863 1.370064 GTGAAGTGCACGGGTAGGT 59.630 57.895 12.01 0.00 37.83 3.08
2760 2864 0.669625 GTGAAGTGCACGGGTAGGTC 60.670 60.000 12.01 2.46 37.83 3.85
2761 2865 1.079336 GAAGTGCACGGGTAGGTCC 60.079 63.158 12.01 0.00 0.00 4.46
2762 2866 1.535687 AAGTGCACGGGTAGGTCCT 60.536 57.895 12.01 0.00 36.25 3.85
2763 2867 1.125711 AAGTGCACGGGTAGGTCCTT 61.126 55.000 12.01 0.00 36.25 3.36
2764 2868 1.375523 GTGCACGGGTAGGTCCTTG 60.376 63.158 0.00 0.00 36.25 3.61
2765 2869 1.534476 TGCACGGGTAGGTCCTTGA 60.534 57.895 0.00 0.00 36.25 3.02
2766 2870 1.122632 TGCACGGGTAGGTCCTTGAA 61.123 55.000 0.00 0.00 36.25 2.69
2767 2871 0.672711 GCACGGGTAGGTCCTTGAAC 60.673 60.000 0.00 0.00 36.25 3.18
2768 2872 0.974383 CACGGGTAGGTCCTTGAACT 59.026 55.000 0.00 0.00 36.25 3.01
2769 2873 0.974383 ACGGGTAGGTCCTTGAACTG 59.026 55.000 0.00 0.00 36.25 3.16
2770 2874 0.974383 CGGGTAGGTCCTTGAACTGT 59.026 55.000 0.00 0.00 36.25 3.55
2771 2875 1.346722 CGGGTAGGTCCTTGAACTGTT 59.653 52.381 0.00 0.00 36.25 3.16
2772 2876 2.224450 CGGGTAGGTCCTTGAACTGTTT 60.224 50.000 0.00 0.00 36.25 2.83
2773 2877 3.409570 GGGTAGGTCCTTGAACTGTTTC 58.590 50.000 0.00 0.00 36.25 2.78
2774 2878 3.181448 GGGTAGGTCCTTGAACTGTTTCA 60.181 47.826 0.00 0.00 40.14 2.69
2783 2887 3.358111 TGAACTGTTTCAAGGGTGTCA 57.642 42.857 0.00 0.00 38.87 3.58
2784 2888 3.013921 TGAACTGTTTCAAGGGTGTCAC 58.986 45.455 0.00 0.00 38.87 3.67
2785 2889 1.663695 ACTGTTTCAAGGGTGTCACG 58.336 50.000 0.00 0.00 0.00 4.35
2786 2890 1.065709 ACTGTTTCAAGGGTGTCACGT 60.066 47.619 0.00 0.00 0.00 4.49
2787 2891 2.168936 ACTGTTTCAAGGGTGTCACGTA 59.831 45.455 0.00 0.00 0.00 3.57
2788 2892 2.800544 CTGTTTCAAGGGTGTCACGTAG 59.199 50.000 0.00 0.00 0.00 3.51
2789 2893 2.140717 GTTTCAAGGGTGTCACGTAGG 58.859 52.381 0.00 0.00 0.00 3.18
2790 2894 1.416243 TTCAAGGGTGTCACGTAGGT 58.584 50.000 0.00 0.00 0.00 3.08
2791 2895 0.963962 TCAAGGGTGTCACGTAGGTC 59.036 55.000 0.00 0.00 0.00 3.85
2792 2896 0.037605 CAAGGGTGTCACGTAGGTCC 60.038 60.000 0.00 0.00 0.00 4.46
2793 2897 0.178941 AAGGGTGTCACGTAGGTCCT 60.179 55.000 0.00 0.00 0.00 3.85
2794 2898 0.611340 AGGGTGTCACGTAGGTCCTC 60.611 60.000 0.00 0.00 0.00 3.71
2795 2899 0.896940 GGGTGTCACGTAGGTCCTCA 60.897 60.000 0.00 0.00 0.00 3.86
2796 2900 0.963962 GGTGTCACGTAGGTCCTCAA 59.036 55.000 0.00 0.00 0.00 3.02
2797 2901 1.342174 GGTGTCACGTAGGTCCTCAAA 59.658 52.381 0.00 0.00 0.00 2.69
2798 2902 2.609737 GGTGTCACGTAGGTCCTCAAAG 60.610 54.545 0.00 0.00 0.00 2.77
2799 2903 2.035576 GTGTCACGTAGGTCCTCAAAGT 59.964 50.000 0.00 0.00 0.00 2.66
2800 2904 3.254166 GTGTCACGTAGGTCCTCAAAGTA 59.746 47.826 0.00 0.00 0.00 2.24
2801 2905 4.082354 GTGTCACGTAGGTCCTCAAAGTAT 60.082 45.833 0.00 0.00 0.00 2.12
2802 2906 4.082408 TGTCACGTAGGTCCTCAAAGTATG 60.082 45.833 0.00 0.00 0.00 2.39
2803 2907 4.157289 GTCACGTAGGTCCTCAAAGTATGA 59.843 45.833 0.00 0.00 36.38 2.15
2804 2908 4.768448 TCACGTAGGTCCTCAAAGTATGAA 59.232 41.667 0.00 0.00 37.67 2.57
2805 2909 5.244402 TCACGTAGGTCCTCAAAGTATGAAA 59.756 40.000 0.00 0.00 37.67 2.69
2806 2910 5.929992 CACGTAGGTCCTCAAAGTATGAAAA 59.070 40.000 0.00 0.00 37.67 2.29
2807 2911 6.594159 CACGTAGGTCCTCAAAGTATGAAAAT 59.406 38.462 0.00 0.00 37.67 1.82
2808 2912 6.817140 ACGTAGGTCCTCAAAGTATGAAAATC 59.183 38.462 0.00 0.00 37.67 2.17
2809 2913 6.019801 CGTAGGTCCTCAAAGTATGAAAATCG 60.020 42.308 0.00 0.00 37.67 3.34
2810 2914 4.636206 AGGTCCTCAAAGTATGAAAATCGC 59.364 41.667 0.00 0.00 37.67 4.58
2811 2915 4.201920 GGTCCTCAAAGTATGAAAATCGCC 60.202 45.833 0.00 0.00 37.67 5.54
2812 2916 4.394920 GTCCTCAAAGTATGAAAATCGCCA 59.605 41.667 0.00 0.00 37.67 5.69
2813 2917 5.066505 GTCCTCAAAGTATGAAAATCGCCAT 59.933 40.000 0.00 0.00 37.67 4.40
2814 2918 5.296780 TCCTCAAAGTATGAAAATCGCCATC 59.703 40.000 0.00 0.00 37.67 3.51
2815 2919 5.499139 TCAAAGTATGAAAATCGCCATCC 57.501 39.130 0.00 0.00 34.30 3.51
2816 2920 4.946772 TCAAAGTATGAAAATCGCCATCCA 59.053 37.500 0.00 0.00 34.30 3.41
2817 2921 5.066375 TCAAAGTATGAAAATCGCCATCCAG 59.934 40.000 0.00 0.00 34.30 3.86
2818 2922 3.480470 AGTATGAAAATCGCCATCCAGG 58.520 45.455 0.00 0.00 41.84 4.45
2819 2923 2.442236 ATGAAAATCGCCATCCAGGT 57.558 45.000 0.00 0.00 40.61 4.00
2820 2924 1.750193 TGAAAATCGCCATCCAGGTC 58.250 50.000 0.00 0.00 40.61 3.85
2821 2925 1.025041 GAAAATCGCCATCCAGGTCC 58.975 55.000 0.00 0.00 40.61 4.46
2822 2926 0.625849 AAAATCGCCATCCAGGTCCT 59.374 50.000 0.00 0.00 40.61 3.85
2823 2927 0.181350 AAATCGCCATCCAGGTCCTC 59.819 55.000 0.00 0.00 40.61 3.71
2824 2928 0.982852 AATCGCCATCCAGGTCCTCA 60.983 55.000 0.00 0.00 40.61 3.86
2825 2929 0.982852 ATCGCCATCCAGGTCCTCAA 60.983 55.000 0.00 0.00 40.61 3.02
2826 2930 1.198094 TCGCCATCCAGGTCCTCAAA 61.198 55.000 0.00 0.00 40.61 2.69
2827 2931 0.745845 CGCCATCCAGGTCCTCAAAG 60.746 60.000 0.00 0.00 40.61 2.77
2828 2932 0.329596 GCCATCCAGGTCCTCAAAGT 59.670 55.000 0.00 0.00 40.61 2.66
2829 2933 1.559682 GCCATCCAGGTCCTCAAAGTA 59.440 52.381 0.00 0.00 40.61 2.24
2830 2934 2.173569 GCCATCCAGGTCCTCAAAGTAT 59.826 50.000 0.00 0.00 40.61 2.12
2831 2935 3.391296 GCCATCCAGGTCCTCAAAGTATA 59.609 47.826 0.00 0.00 40.61 1.47
2832 2936 4.503991 GCCATCCAGGTCCTCAAAGTATAG 60.504 50.000 0.00 0.00 40.61 1.31
2833 2937 4.656112 CCATCCAGGTCCTCAAAGTATAGT 59.344 45.833 0.00 0.00 0.00 2.12
2834 2938 5.839063 CCATCCAGGTCCTCAAAGTATAGTA 59.161 44.000 0.00 0.00 0.00 1.82
2835 2939 6.326583 CCATCCAGGTCCTCAAAGTATAGTAA 59.673 42.308 0.00 0.00 0.00 2.24
2836 2940 7.437748 CATCCAGGTCCTCAAAGTATAGTAAG 58.562 42.308 0.00 0.00 0.00 2.34
2837 2941 6.500336 TCCAGGTCCTCAAAGTATAGTAAGT 58.500 40.000 0.00 0.00 0.00 2.24
2838 2942 6.380274 TCCAGGTCCTCAAAGTATAGTAAGTG 59.620 42.308 0.00 0.00 0.00 3.16
2839 2943 6.154706 CCAGGTCCTCAAAGTATAGTAAGTGT 59.845 42.308 0.00 0.00 0.00 3.55
2840 2944 7.036220 CAGGTCCTCAAAGTATAGTAAGTGTG 58.964 42.308 0.00 0.00 0.00 3.82
2841 2945 6.724905 AGGTCCTCAAAGTATAGTAAGTGTGT 59.275 38.462 0.00 0.00 0.00 3.72
2842 2946 7.034397 GGTCCTCAAAGTATAGTAAGTGTGTC 58.966 42.308 0.00 0.00 0.00 3.67
2843 2947 7.309621 GGTCCTCAAAGTATAGTAAGTGTGTCA 60.310 40.741 0.00 0.00 0.00 3.58
2844 2948 8.251721 GTCCTCAAAGTATAGTAAGTGTGTCAT 58.748 37.037 0.00 0.00 0.00 3.06
2845 2949 8.251026 TCCTCAAAGTATAGTAAGTGTGTCATG 58.749 37.037 0.00 0.00 0.00 3.07
2846 2950 7.010552 CCTCAAAGTATAGTAAGTGTGTCATGC 59.989 40.741 0.00 0.00 0.00 4.06
2847 2951 7.611770 TCAAAGTATAGTAAGTGTGTCATGCT 58.388 34.615 0.00 0.00 0.00 3.79
2848 2952 8.745590 TCAAAGTATAGTAAGTGTGTCATGCTA 58.254 33.333 0.00 0.00 0.00 3.49
2849 2953 9.025020 CAAAGTATAGTAAGTGTGTCATGCTAG 57.975 37.037 0.00 0.00 0.00 3.42
2850 2954 7.278461 AGTATAGTAAGTGTGTCATGCTAGG 57.722 40.000 0.00 0.00 0.00 3.02
2851 2955 3.252974 AGTAAGTGTGTCATGCTAGGC 57.747 47.619 0.00 0.00 0.00 3.93
2852 2956 2.567169 AGTAAGTGTGTCATGCTAGGCA 59.433 45.455 0.00 0.00 44.86 4.75
2853 2957 2.566833 AAGTGTGTCATGCTAGGCAA 57.433 45.000 0.00 0.00 43.62 4.52
2854 2958 2.566833 AGTGTGTCATGCTAGGCAAA 57.433 45.000 0.00 0.00 43.62 3.68
2855 2959 2.862541 AGTGTGTCATGCTAGGCAAAA 58.137 42.857 0.00 0.00 43.62 2.44
2856 2960 3.424703 AGTGTGTCATGCTAGGCAAAAT 58.575 40.909 0.00 0.00 43.62 1.82
2857 2961 4.588899 AGTGTGTCATGCTAGGCAAAATA 58.411 39.130 0.00 0.00 43.62 1.40
2858 2962 5.195940 AGTGTGTCATGCTAGGCAAAATAT 58.804 37.500 0.00 0.00 43.62 1.28
2859 2963 6.356556 AGTGTGTCATGCTAGGCAAAATATA 58.643 36.000 0.00 0.00 43.62 0.86
2860 2964 6.484643 AGTGTGTCATGCTAGGCAAAATATAG 59.515 38.462 0.00 0.00 43.62 1.31
2861 2965 5.764686 TGTGTCATGCTAGGCAAAATATAGG 59.235 40.000 0.00 0.00 43.62 2.57
2862 2966 5.765182 GTGTCATGCTAGGCAAAATATAGGT 59.235 40.000 0.00 0.00 43.62 3.08
2863 2967 5.997746 TGTCATGCTAGGCAAAATATAGGTC 59.002 40.000 0.00 0.00 43.62 3.85
2864 2968 5.412904 GTCATGCTAGGCAAAATATAGGTCC 59.587 44.000 0.00 0.00 43.62 4.46
2865 2969 5.310594 TCATGCTAGGCAAAATATAGGTCCT 59.689 40.000 0.00 0.00 43.62 3.85
2866 2970 5.228945 TGCTAGGCAAAATATAGGTCCTC 57.771 43.478 0.00 0.00 34.76 3.71
2867 2971 4.246458 GCTAGGCAAAATATAGGTCCTCG 58.754 47.826 0.00 0.00 0.00 4.63
2868 2972 3.771577 AGGCAAAATATAGGTCCTCGG 57.228 47.619 0.00 0.00 0.00 4.63
2869 2973 3.314693 AGGCAAAATATAGGTCCTCGGA 58.685 45.455 0.00 0.00 0.00 4.55
2870 2974 3.071167 AGGCAAAATATAGGTCCTCGGAC 59.929 47.826 7.57 7.57 43.87 4.79
2871 2975 3.071167 GGCAAAATATAGGTCCTCGGACT 59.929 47.826 15.18 4.99 44.04 3.85
2872 2976 4.282703 GGCAAAATATAGGTCCTCGGACTA 59.717 45.833 15.18 6.84 44.04 2.59
2873 2977 5.228665 GCAAAATATAGGTCCTCGGACTAC 58.771 45.833 15.18 0.61 44.04 2.73
2874 2978 5.010820 GCAAAATATAGGTCCTCGGACTACT 59.989 44.000 15.18 7.85 44.04 2.57
2875 2979 6.462628 GCAAAATATAGGTCCTCGGACTACTT 60.463 42.308 15.18 2.97 44.04 2.24
2876 2980 7.498443 CAAAATATAGGTCCTCGGACTACTTT 58.502 38.462 15.18 1.26 44.04 2.66
2877 2981 8.636213 CAAAATATAGGTCCTCGGACTACTTTA 58.364 37.037 15.18 5.76 44.04 1.85
2878 2982 7.999450 AATATAGGTCCTCGGACTACTTTAG 57.001 40.000 15.18 0.00 44.04 1.85
2879 2983 3.735720 AGGTCCTCGGACTACTTTAGT 57.264 47.619 15.18 0.00 44.04 2.24
2880 2984 3.354467 AGGTCCTCGGACTACTTTAGTG 58.646 50.000 15.18 0.00 44.04 2.74
2881 2985 3.087781 GGTCCTCGGACTACTTTAGTGT 58.912 50.000 15.18 0.00 44.04 3.55
2882 2986 3.509184 GGTCCTCGGACTACTTTAGTGTT 59.491 47.826 15.18 0.00 44.04 3.32
2883 2987 4.483311 GTCCTCGGACTACTTTAGTGTTG 58.517 47.826 8.82 0.00 41.57 3.33
2884 2988 4.217118 GTCCTCGGACTACTTTAGTGTTGA 59.783 45.833 8.82 0.00 41.57 3.18
2885 2989 4.828939 TCCTCGGACTACTTTAGTGTTGAA 59.171 41.667 0.00 0.00 39.59 2.69
2886 2990 4.922103 CCTCGGACTACTTTAGTGTTGAAC 59.078 45.833 0.00 0.00 39.59 3.18
2887 2991 5.278858 CCTCGGACTACTTTAGTGTTGAACT 60.279 44.000 0.00 0.00 43.40 3.01
2888 2992 5.526115 TCGGACTACTTTAGTGTTGAACTG 58.474 41.667 0.00 0.00 40.26 3.16
2889 2993 5.300034 TCGGACTACTTTAGTGTTGAACTGA 59.700 40.000 0.00 0.00 40.26 3.41
2890 2994 6.015688 TCGGACTACTTTAGTGTTGAACTGAT 60.016 38.462 0.00 0.00 40.26 2.90
2891 2995 6.645415 CGGACTACTTTAGTGTTGAACTGATT 59.355 38.462 0.00 0.00 40.26 2.57
2892 2996 7.170998 CGGACTACTTTAGTGTTGAACTGATTT 59.829 37.037 0.00 0.00 40.26 2.17
2893 2997 8.837389 GGACTACTTTAGTGTTGAACTGATTTT 58.163 33.333 0.00 0.00 40.26 1.82
2894 2998 9.651718 GACTACTTTAGTGTTGAACTGATTTTG 57.348 33.333 0.00 0.00 40.26 2.44
2895 2999 8.621286 ACTACTTTAGTGTTGAACTGATTTTGG 58.379 33.333 0.00 0.00 40.26 3.28
2896 3000 7.639113 ACTTTAGTGTTGAACTGATTTTGGA 57.361 32.000 0.00 0.00 40.26 3.53
2897 3001 7.480810 ACTTTAGTGTTGAACTGATTTTGGAC 58.519 34.615 0.00 0.00 40.26 4.02
2898 3002 4.918810 AGTGTTGAACTGATTTTGGACC 57.081 40.909 0.00 0.00 37.88 4.46
2899 3003 4.536765 AGTGTTGAACTGATTTTGGACCT 58.463 39.130 0.00 0.00 37.88 3.85
2900 3004 4.339247 AGTGTTGAACTGATTTTGGACCTG 59.661 41.667 0.00 0.00 37.88 4.00
2901 3005 3.636300 TGTTGAACTGATTTTGGACCTGG 59.364 43.478 0.00 0.00 0.00 4.45
2902 3006 3.874383 TGAACTGATTTTGGACCTGGA 57.126 42.857 0.00 0.00 0.00 3.86
2903 3007 4.387026 TGAACTGATTTTGGACCTGGAT 57.613 40.909 0.00 0.00 0.00 3.41
2904 3008 4.081406 TGAACTGATTTTGGACCTGGATG 58.919 43.478 0.00 0.00 0.00 3.51
2905 3009 4.202556 TGAACTGATTTTGGACCTGGATGA 60.203 41.667 0.00 0.00 0.00 2.92
2906 3010 3.690460 ACTGATTTTGGACCTGGATGAC 58.310 45.455 0.00 0.00 0.00 3.06
2907 3011 3.074390 ACTGATTTTGGACCTGGATGACA 59.926 43.478 0.00 0.00 0.00 3.58
2908 3012 3.420893 TGATTTTGGACCTGGATGACAC 58.579 45.455 0.00 0.00 0.00 3.67
2909 3013 3.181435 TGATTTTGGACCTGGATGACACA 60.181 43.478 0.00 0.00 0.00 3.72
2910 3014 2.270352 TTTGGACCTGGATGACACAC 57.730 50.000 0.00 0.00 0.00 3.82
2911 3015 1.434188 TTGGACCTGGATGACACACT 58.566 50.000 0.00 0.00 0.00 3.55
2912 3016 1.434188 TGGACCTGGATGACACACTT 58.566 50.000 0.00 0.00 0.00 3.16
2913 3017 2.615391 TGGACCTGGATGACACACTTA 58.385 47.619 0.00 0.00 0.00 2.24
2914 3018 3.181329 TGGACCTGGATGACACACTTAT 58.819 45.455 0.00 0.00 0.00 1.73
2915 3019 3.587061 TGGACCTGGATGACACACTTATT 59.413 43.478 0.00 0.00 0.00 1.40
2916 3020 4.780554 TGGACCTGGATGACACACTTATTA 59.219 41.667 0.00 0.00 0.00 0.98
2917 3021 5.116882 GGACCTGGATGACACACTTATTAC 58.883 45.833 0.00 0.00 0.00 1.89
2918 3022 5.338056 GGACCTGGATGACACACTTATTACA 60.338 44.000 0.00 0.00 0.00 2.41
2919 3023 5.488341 ACCTGGATGACACACTTATTACAC 58.512 41.667 0.00 0.00 0.00 2.90
2920 3024 5.248477 ACCTGGATGACACACTTATTACACT 59.752 40.000 0.00 0.00 0.00 3.55
2921 3025 6.173339 CCTGGATGACACACTTATTACACTT 58.827 40.000 0.00 0.00 0.00 3.16
2922 3026 6.655003 CCTGGATGACACACTTATTACACTTT 59.345 38.462 0.00 0.00 0.00 2.66
2923 3027 7.822334 CCTGGATGACACACTTATTACACTTTA 59.178 37.037 0.00 0.00 0.00 1.85
2924 3028 9.214957 CTGGATGACACACTTATTACACTTTAA 57.785 33.333 0.00 0.00 0.00 1.52
2925 3029 9.214957 TGGATGACACACTTATTACACTTTAAG 57.785 33.333 0.00 0.00 0.00 1.85
2926 3030 8.665685 GGATGACACACTTATTACACTTTAAGG 58.334 37.037 0.00 0.00 31.15 2.69
2927 3031 9.431887 GATGACACACTTATTACACTTTAAGGA 57.568 33.333 0.00 0.00 31.15 3.36
2928 3032 8.597662 TGACACACTTATTACACTTTAAGGAC 57.402 34.615 0.00 0.00 31.15 3.85
2929 3033 7.658575 TGACACACTTATTACACTTTAAGGACC 59.341 37.037 0.00 0.00 31.15 4.46
2930 3034 7.742767 ACACACTTATTACACTTTAAGGACCT 58.257 34.615 0.00 0.00 31.15 3.85
2931 3035 8.873144 ACACACTTATTACACTTTAAGGACCTA 58.127 33.333 0.00 0.00 31.15 3.08
2932 3036 9.367444 CACACTTATTACACTTTAAGGACCTAG 57.633 37.037 0.00 0.00 31.15 3.02
2933 3037 9.317827 ACACTTATTACACTTTAAGGACCTAGA 57.682 33.333 0.00 0.00 31.15 2.43
2934 3038 9.583765 CACTTATTACACTTTAAGGACCTAGAC 57.416 37.037 0.00 0.00 31.15 2.59
2935 3039 8.465201 ACTTATTACACTTTAAGGACCTAGACG 58.535 37.037 0.00 0.00 31.15 4.18
2936 3040 8.579850 TTATTACACTTTAAGGACCTAGACGA 57.420 34.615 0.00 0.00 0.00 4.20
2937 3041 7.657023 ATTACACTTTAAGGACCTAGACGAT 57.343 36.000 0.00 0.00 0.00 3.73
2938 3042 5.326200 ACACTTTAAGGACCTAGACGATG 57.674 43.478 0.00 0.00 0.00 3.84
2939 3043 5.014858 ACACTTTAAGGACCTAGACGATGA 58.985 41.667 0.00 0.00 0.00 2.92
2940 3044 5.657302 ACACTTTAAGGACCTAGACGATGAT 59.343 40.000 0.00 0.00 0.00 2.45
2941 3045 6.154706 ACACTTTAAGGACCTAGACGATGATT 59.845 38.462 0.00 0.00 0.00 2.57
2942 3046 7.042335 CACTTTAAGGACCTAGACGATGATTT 58.958 38.462 0.00 0.00 0.00 2.17
2943 3047 7.549488 CACTTTAAGGACCTAGACGATGATTTT 59.451 37.037 0.00 0.00 0.00 1.82
2944 3048 7.764901 ACTTTAAGGACCTAGACGATGATTTTC 59.235 37.037 0.00 0.00 0.00 2.29
2945 3049 5.677319 AAGGACCTAGACGATGATTTTCA 57.323 39.130 0.00 0.00 0.00 2.69
2946 3050 5.878406 AGGACCTAGACGATGATTTTCAT 57.122 39.130 0.00 0.00 40.34 2.57
2947 3051 6.978674 AGGACCTAGACGATGATTTTCATA 57.021 37.500 0.00 0.00 37.20 2.15
2948 3052 6.987386 AGGACCTAGACGATGATTTTCATAG 58.013 40.000 0.00 0.00 37.20 2.23
2949 3053 6.551601 AGGACCTAGACGATGATTTTCATAGT 59.448 38.462 0.00 3.37 43.69 2.12
2950 3054 7.070074 AGGACCTAGACGATGATTTTCATAGTT 59.930 37.037 0.00 0.20 41.64 2.24
2951 3055 7.711339 GGACCTAGACGATGATTTTCATAGTTT 59.289 37.037 5.02 2.85 41.64 2.66
2952 3056 8.425577 ACCTAGACGATGATTTTCATAGTTTG 57.574 34.615 5.02 0.62 41.64 2.93
2953 3057 8.258007 ACCTAGACGATGATTTTCATAGTTTGA 58.742 33.333 5.02 0.00 41.64 2.69
2954 3058 8.759641 CCTAGACGATGATTTTCATAGTTTGAG 58.240 37.037 5.02 3.86 41.64 3.02
2955 3059 7.545362 AGACGATGATTTTCATAGTTTGAGG 57.455 36.000 5.02 0.00 41.64 3.86
2956 3060 7.331026 AGACGATGATTTTCATAGTTTGAGGA 58.669 34.615 5.02 0.00 41.64 3.71
2957 3061 7.278868 AGACGATGATTTTCATAGTTTGAGGAC 59.721 37.037 5.02 0.00 41.64 3.85
2958 3062 6.316390 ACGATGATTTTCATAGTTTGAGGACC 59.684 38.462 0.00 0.00 39.18 4.46
2959 3063 6.540189 CGATGATTTTCATAGTTTGAGGACCT 59.460 38.462 0.00 0.00 37.20 3.85
2960 3064 7.710907 CGATGATTTTCATAGTTTGAGGACCTA 59.289 37.037 0.00 0.00 37.20 3.08
2961 3065 8.738645 ATGATTTTCATAGTTTGAGGACCTAC 57.261 34.615 0.00 0.00 34.88 3.18
2962 3066 6.816640 TGATTTTCATAGTTTGAGGACCTACG 59.183 38.462 0.00 0.00 35.27 3.51
2963 3067 5.733620 TTTCATAGTTTGAGGACCTACGT 57.266 39.130 0.00 0.00 35.27 3.57
2964 3068 4.713824 TCATAGTTTGAGGACCTACGTG 57.286 45.455 0.00 0.00 0.00 4.49
2965 3069 4.338012 TCATAGTTTGAGGACCTACGTGA 58.662 43.478 0.00 0.00 0.00 4.35
2966 3070 4.157289 TCATAGTTTGAGGACCTACGTGAC 59.843 45.833 0.00 0.00 0.00 3.67
2967 3071 2.313317 AGTTTGAGGACCTACGTGACA 58.687 47.619 0.00 0.00 0.00 3.58
2968 3072 2.035576 AGTTTGAGGACCTACGTGACAC 59.964 50.000 0.00 0.00 0.00 3.67
2969 3073 0.963962 TTGAGGACCTACGTGACACC 59.036 55.000 0.00 0.00 0.00 4.16
2970 3074 0.111832 TGAGGACCTACGTGACACCT 59.888 55.000 0.00 1.75 0.00 4.00
2971 3075 0.526662 GAGGACCTACGTGACACCTG 59.473 60.000 0.00 0.00 0.00 4.00
2972 3076 0.178970 AGGACCTACGTGACACCTGT 60.179 55.000 0.00 0.00 0.00 4.00
2973 3077 0.038526 GGACCTACGTGACACCTGTG 60.039 60.000 0.00 0.00 0.00 3.66
2974 3078 0.956633 GACCTACGTGACACCTGTGA 59.043 55.000 3.94 0.00 0.00 3.58
2975 3079 1.338973 GACCTACGTGACACCTGTGAA 59.661 52.381 3.94 0.00 0.00 3.18
2976 3080 1.340248 ACCTACGTGACACCTGTGAAG 59.660 52.381 3.94 0.00 0.00 3.02
2977 3081 1.340248 CCTACGTGACACCTGTGAAGT 59.660 52.381 3.94 0.00 0.00 3.01
2978 3082 2.555325 CCTACGTGACACCTGTGAAGTA 59.445 50.000 3.94 0.00 0.00 2.24
2979 3083 2.795175 ACGTGACACCTGTGAAGTAG 57.205 50.000 3.94 0.00 0.00 2.57
2980 3084 2.029623 ACGTGACACCTGTGAAGTAGT 58.970 47.619 3.94 0.00 0.00 2.73
2981 3085 2.429610 ACGTGACACCTGTGAAGTAGTT 59.570 45.455 3.94 0.00 0.00 2.24
2982 3086 3.050619 CGTGACACCTGTGAAGTAGTTC 58.949 50.000 3.94 3.15 0.00 3.01
2983 3087 3.490249 CGTGACACCTGTGAAGTAGTTCA 60.490 47.826 8.98 8.98 40.55 3.18
2984 3088 4.051922 GTGACACCTGTGAAGTAGTTCAG 58.948 47.826 13.36 5.01 43.55 3.02
2988 3092 3.320673 CCTGTGAAGTAGTTCAGGGAC 57.679 52.381 19.74 8.42 43.55 4.46
2989 3093 2.028020 CCTGTGAAGTAGTTCAGGGACC 60.028 54.545 19.74 8.13 43.55 4.46
2990 3094 2.900546 CTGTGAAGTAGTTCAGGGACCT 59.099 50.000 13.36 0.00 43.55 3.85
2991 3095 4.087182 CTGTGAAGTAGTTCAGGGACCTA 58.913 47.826 13.36 0.00 43.55 3.08
2992 3096 4.087182 TGTGAAGTAGTTCAGGGACCTAG 58.913 47.826 13.36 0.00 43.55 3.02
2993 3097 4.202641 TGTGAAGTAGTTCAGGGACCTAGA 60.203 45.833 13.36 0.00 43.55 2.43
2994 3098 4.771054 GTGAAGTAGTTCAGGGACCTAGAA 59.229 45.833 13.36 0.00 43.55 2.10
2995 3099 5.422650 GTGAAGTAGTTCAGGGACCTAGAAT 59.577 44.000 13.36 0.00 43.55 2.40
2996 3100 5.422331 TGAAGTAGTTCAGGGACCTAGAATG 59.578 44.000 8.98 0.00 37.79 2.67
2997 3101 3.707102 AGTAGTTCAGGGACCTAGAATGC 59.293 47.826 0.00 0.00 0.00 3.56
2998 3102 2.551270 AGTTCAGGGACCTAGAATGCA 58.449 47.619 0.00 0.00 0.00 3.96
2999 3103 2.237392 AGTTCAGGGACCTAGAATGCAC 59.763 50.000 0.00 0.00 0.00 4.57
3000 3104 2.237392 GTTCAGGGACCTAGAATGCACT 59.763 50.000 0.00 0.00 0.00 4.40
3001 3105 2.551270 TCAGGGACCTAGAATGCACTT 58.449 47.619 0.00 0.00 0.00 3.16
3002 3106 2.501723 TCAGGGACCTAGAATGCACTTC 59.498 50.000 0.00 0.00 0.00 3.01
3003 3107 2.237143 CAGGGACCTAGAATGCACTTCA 59.763 50.000 10.26 0.00 36.24 3.02
3004 3108 2.237392 AGGGACCTAGAATGCACTTCAC 59.763 50.000 10.26 0.00 36.24 3.18
3005 3109 2.237392 GGGACCTAGAATGCACTTCACT 59.763 50.000 10.26 0.00 36.24 3.41
3006 3110 3.526534 GGACCTAGAATGCACTTCACTC 58.473 50.000 10.26 1.71 36.24 3.51
3007 3111 3.196685 GGACCTAGAATGCACTTCACTCT 59.803 47.826 10.26 0.40 35.22 3.24
3008 3112 4.180057 GACCTAGAATGCACTTCACTCTG 58.820 47.826 10.26 0.19 32.85 3.35
3009 3113 3.834813 ACCTAGAATGCACTTCACTCTGA 59.165 43.478 10.26 0.00 32.85 3.27
3039 3143 6.747414 AGTATATGTTGGACCTAGAATGCA 57.253 37.500 0.00 0.00 0.00 3.96
3040 3144 6.525629 AGTATATGTTGGACCTAGAATGCAC 58.474 40.000 0.00 0.00 0.00 4.57
3041 3145 5.636903 ATATGTTGGACCTAGAATGCACT 57.363 39.130 0.00 0.00 0.00 4.40
3042 3146 3.788227 TGTTGGACCTAGAATGCACTT 57.212 42.857 0.00 0.00 0.00 3.16
3043 3147 3.674997 TGTTGGACCTAGAATGCACTTC 58.325 45.455 0.00 0.00 0.00 3.01
3044 3148 3.072330 TGTTGGACCTAGAATGCACTTCA 59.928 43.478 10.26 0.00 36.24 3.02
3045 3149 3.616956 TGGACCTAGAATGCACTTCAG 57.383 47.619 10.26 6.54 36.24 3.02
3046 3150 2.906389 TGGACCTAGAATGCACTTCAGT 59.094 45.455 10.26 5.71 36.24 3.41
3047 3151 3.055819 TGGACCTAGAATGCACTTCAGTC 60.056 47.826 10.26 11.67 39.90 3.51
3105 3209 7.649705 TGTTTTTGTCTATCGCAAGCAAAAATA 59.350 29.630 20.44 17.84 44.90 1.40
3147 3254 5.958380 TGGCCCTCGAGATAATATCTGTAAT 59.042 40.000 15.71 0.00 40.38 1.89
3272 3379 3.504906 CACGTTGAGACCTGGTAACTCTA 59.495 47.826 14.49 6.40 37.61 2.43
3566 3673 0.392336 AGAGGGCAGCGATGATTCTC 59.608 55.000 4.02 7.54 0.00 2.87
3567 3674 0.943359 GAGGGCAGCGATGATTCTCG 60.943 60.000 4.02 0.00 41.54 4.04
3724 3833 2.887152 AGACAACAAGAAGAATGGTGCC 59.113 45.455 0.00 0.00 39.11 5.01
4379 4488 2.298446 AGCATGGATCCGTGACTATCAG 59.702 50.000 33.81 8.58 35.09 2.90
4386 4495 0.103208 CCGTGACTATCAGCCCTGAC 59.897 60.000 0.00 0.00 43.11 3.51
4459 4568 3.625764 CCCGAATATTCCGAAGCTCAAAA 59.374 43.478 9.87 0.00 0.00 2.44
4498 4607 2.287975 CCCCCTTCCCCTCCCATT 60.288 66.667 0.00 0.00 0.00 3.16
4509 4618 3.401002 TCCCCTCCCATTTTCTGAAGAAA 59.599 43.478 1.31 1.31 41.77 2.52
4625 4734 2.017049 CTTTTAGAAGGATGGGCCACG 58.983 52.381 9.28 0.00 40.02 4.94
4796 4905 2.158623 CCATTGTTAGGGATAGCCAGCA 60.159 50.000 0.00 0.00 35.15 4.41
4817 4926 5.364735 AGCAAGGGAAAGAAATATGGAATGG 59.635 40.000 0.00 0.00 0.00 3.16
4877 4986 1.588674 TTTGTGTACCAGGAAGCGTG 58.411 50.000 0.00 0.00 0.00 5.34
4886 4995 6.927381 GTGTACCAGGAAGCGTGTATATAAAT 59.073 38.462 0.00 0.00 0.00 1.40
4929 5038 1.614903 CAAGGTGAAATCTGCAAGCCA 59.385 47.619 0.00 0.00 0.00 4.75
4930 5039 1.251251 AGGTGAAATCTGCAAGCCAC 58.749 50.000 0.00 0.00 0.00 5.01
4931 5040 0.109597 GGTGAAATCTGCAAGCCACG 60.110 55.000 0.00 0.00 0.00 4.94
4932 5041 0.874390 GTGAAATCTGCAAGCCACGA 59.126 50.000 0.00 0.00 0.00 4.35
4933 5042 1.266718 GTGAAATCTGCAAGCCACGAA 59.733 47.619 0.00 0.00 0.00 3.85
4934 5043 1.536766 TGAAATCTGCAAGCCACGAAG 59.463 47.619 0.00 0.00 0.00 3.79
4935 5044 1.806542 GAAATCTGCAAGCCACGAAGA 59.193 47.619 0.00 0.00 0.00 2.87
4936 5045 1.896220 AATCTGCAAGCCACGAAGAA 58.104 45.000 0.00 0.00 0.00 2.52
4937 5046 1.160137 ATCTGCAAGCCACGAAGAAC 58.840 50.000 0.00 0.00 0.00 3.01
5050 5170 3.085952 TGAGTTAAAAGCATCCCAGGG 57.914 47.619 0.00 0.00 0.00 4.45
5057 5178 1.224003 AAGCATCCCAGGGACCCAAT 61.224 55.000 11.70 0.00 32.98 3.16
5192 5313 2.513895 CAGGTGGTTGGACCGGTT 59.486 61.111 9.42 0.00 42.58 4.44
5195 5316 1.454295 GGTGGTTGGACCGGTTGTT 60.454 57.895 9.42 0.00 42.58 2.83
5295 5417 0.108329 TCTCAAATCCCCTTCGCGTC 60.108 55.000 5.77 0.00 0.00 5.19
5296 5418 0.108138 CTCAAATCCCCTTCGCGTCT 60.108 55.000 5.77 0.00 0.00 4.18
5310 5432 0.778815 GCGTCTGTTCGAGAACACAG 59.221 55.000 13.96 8.40 45.42 3.66
5314 5436 0.861837 CTGTTCGAGAACACAGGTGC 59.138 55.000 13.96 0.00 45.42 5.01
5428 5566 3.838271 GCTCATCTCGTCCGCCCA 61.838 66.667 0.00 0.00 0.00 5.36
5445 5584 1.218047 CATTCGGCGTCTTCCCTCA 59.782 57.895 6.85 0.00 0.00 3.86
5460 5599 5.485353 TCTTCCCTCATGATTACTGTGAGTT 59.515 40.000 0.00 0.00 38.10 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 0.248215 CGCTGATGGTCGCATTTTCC 60.248 55.000 0.00 0.00 0.00 3.13
58 59 3.224955 CGCTGATGGTCGCATTTTC 57.775 52.632 0.00 0.00 0.00 2.29
247 248 3.744719 CTCCGGCTTGGACGACGA 61.745 66.667 0.00 0.00 43.74 4.20
248 249 3.569049 AACTCCGGCTTGGACGACG 62.569 63.158 0.00 0.00 43.74 5.12
249 250 1.737008 GAACTCCGGCTTGGACGAC 60.737 63.158 0.00 0.00 43.74 4.34
309 310 4.715523 TTCCGCCCGCCCTTCTTG 62.716 66.667 0.00 0.00 0.00 3.02
579 598 5.766670 TCAAAATCTGCCTCATCATCATACC 59.233 40.000 0.00 0.00 0.00 2.73
583 602 3.630769 GCTCAAAATCTGCCTCATCATCA 59.369 43.478 0.00 0.00 0.00 3.07
584 603 3.630769 TGCTCAAAATCTGCCTCATCATC 59.369 43.478 0.00 0.00 0.00 2.92
613 632 7.830940 TTAATTCGTACAATCACGGTGTATT 57.169 32.000 8.17 4.27 42.19 1.89
614 633 7.830940 TTTAATTCGTACAATCACGGTGTAT 57.169 32.000 8.17 0.00 42.19 2.29
673 694 6.527023 CACAGACGAGTTACTTAACACTATGG 59.473 42.308 2.10 0.00 38.62 2.74
691 715 2.032894 GGTGTTCAACATGACACAGACG 60.033 50.000 15.04 0.00 33.31 4.18
700 724 2.101249 AGCCACTTTGGTGTTCAACATG 59.899 45.455 0.00 0.00 40.46 3.21
990 1034 2.247437 GGGATCCATTCGCGCAGAC 61.247 63.158 15.23 0.00 0.00 3.51
1046 1090 0.475906 ATAATCACCTGGGGCTGCTC 59.524 55.000 0.00 0.00 0.00 4.26
1047 1091 0.929244 AATAATCACCTGGGGCTGCT 59.071 50.000 0.00 0.00 0.00 4.24
1064 1108 6.924060 CGATTAGACGAGGAAAATAGGTCAAT 59.076 38.462 0.00 0.00 35.09 2.57
1068 1112 4.648307 ACCGATTAGACGAGGAAAATAGGT 59.352 41.667 0.00 0.00 33.96 3.08
1071 1115 4.576053 TCGACCGATTAGACGAGGAAAATA 59.424 41.667 0.00 0.00 35.09 1.40
1072 1116 3.379372 TCGACCGATTAGACGAGGAAAAT 59.621 43.478 0.00 0.00 35.09 1.82
1108 1152 2.220479 GCTAGGGTTTTAGCGTCGAT 57.780 50.000 0.00 0.00 36.97 3.59
1159 1207 0.032267 GTCCTCCTTAATCTCCGCGG 59.968 60.000 22.12 22.12 0.00 6.46
1166 1214 2.981859 TTCCAGCGTCCTCCTTAATC 57.018 50.000 0.00 0.00 0.00 1.75
1168 1216 1.338769 GCTTTCCAGCGTCCTCCTTAA 60.339 52.381 0.00 0.00 35.91 1.85
1169 1217 0.249398 GCTTTCCAGCGTCCTCCTTA 59.751 55.000 0.00 0.00 35.91 2.69
1171 1219 2.665603 GCTTTCCAGCGTCCTCCT 59.334 61.111 0.00 0.00 35.91 3.69
1181 1229 1.152777 CACCACCACCTGCTTTCCA 60.153 57.895 0.00 0.00 0.00 3.53
1184 1232 1.145738 AGAATCACCACCACCTGCTTT 59.854 47.619 0.00 0.00 0.00 3.51
1331 1379 1.625616 GCAGCAGCACAGCAAATTAG 58.374 50.000 0.00 0.00 41.58 1.73
1341 1389 1.005394 AAAGCAATGGCAGCAGCAC 60.005 52.632 2.65 0.00 44.61 4.40
1342 1390 1.290955 GAAAGCAATGGCAGCAGCA 59.709 52.632 2.65 0.00 44.61 4.41
1345 1393 1.865788 GACGGAAAGCAATGGCAGCA 61.866 55.000 0.00 0.00 44.61 4.41
1346 1394 1.153958 GACGGAAAGCAATGGCAGC 60.154 57.895 0.00 0.00 44.61 5.25
1347 1395 0.449388 GAGACGGAAAGCAATGGCAG 59.551 55.000 0.00 0.00 44.61 4.85
1387 1444 2.094417 GGCGTTACAGAATGCTTGTCTC 59.906 50.000 2.21 0.00 45.41 3.36
1454 1511 9.023962 ACACATGTGATCCAGTAACAAATTATT 57.976 29.630 31.94 0.00 0.00 1.40
1535 1624 1.252215 TGAGACGTTATCCGGTGCCA 61.252 55.000 0.00 0.00 42.24 4.92
1536 1625 0.108520 TTGAGACGTTATCCGGTGCC 60.109 55.000 0.00 0.00 42.24 5.01
1549 1651 7.415229 AGATTTCGGTGTTTTAACTTTGAGAC 58.585 34.615 0.00 0.00 0.00 3.36
1585 1687 1.409661 GCCCGAATCACCCCAACTTAT 60.410 52.381 0.00 0.00 0.00 1.73
1659 1762 4.778534 CAGAATCCTGTCACAATTGCTT 57.221 40.909 5.05 0.00 35.70 3.91
1849 1952 0.108377 ATGCACATCCGCTTGTACGA 60.108 50.000 0.00 0.00 34.06 3.43
1982 2085 2.159179 AGGGTGCCTGTTTGTTCTTT 57.841 45.000 0.00 0.00 29.57 2.52
2187 2290 3.864789 AGTTCCACTGGACTTGTTGAT 57.135 42.857 0.00 0.00 0.00 2.57
2240 2343 6.094325 TCTCCTGTTTCAACGTTGTATTTTGT 59.906 34.615 26.47 0.00 0.00 2.83
2338 2441 7.282450 TGTCAGAAGAAACCTTTTCCTTACTTC 59.718 37.037 0.00 0.00 34.62 3.01
2417 2520 4.224594 ACCTCAGATGCTTTCTCAAGATCA 59.775 41.667 0.00 0.00 29.93 2.92
2685 2789 7.582352 CATTTGATAGAACCTGCACATCATAG 58.418 38.462 0.00 0.00 0.00 2.23
2688 2792 4.096833 GCATTTGATAGAACCTGCACATCA 59.903 41.667 0.00 0.00 0.00 3.07
2732 2836 4.250464 CCCGTGCACTTCACTCTATAAAA 58.750 43.478 16.19 0.00 43.46 1.52
2734 2838 2.829720 ACCCGTGCACTTCACTCTATAA 59.170 45.455 16.19 0.00 43.46 0.98
2735 2839 2.453521 ACCCGTGCACTTCACTCTATA 58.546 47.619 16.19 0.00 43.46 1.31
2736 2840 1.267121 ACCCGTGCACTTCACTCTAT 58.733 50.000 16.19 0.00 43.46 1.98
2737 2841 1.816835 CTACCCGTGCACTTCACTCTA 59.183 52.381 16.19 0.00 43.46 2.43
2738 2842 0.603569 CTACCCGTGCACTTCACTCT 59.396 55.000 16.19 0.00 43.46 3.24
2739 2843 0.389948 CCTACCCGTGCACTTCACTC 60.390 60.000 16.19 0.00 43.46 3.51
2740 2844 1.119574 ACCTACCCGTGCACTTCACT 61.120 55.000 16.19 0.00 43.46 3.41
2741 2845 0.669625 GACCTACCCGTGCACTTCAC 60.670 60.000 16.19 0.00 42.23 3.18
2742 2846 1.669440 GACCTACCCGTGCACTTCA 59.331 57.895 16.19 0.00 0.00 3.02
2743 2847 1.079336 GGACCTACCCGTGCACTTC 60.079 63.158 16.19 0.00 0.00 3.01
2744 2848 1.125711 AAGGACCTACCCGTGCACTT 61.126 55.000 16.19 1.28 40.05 3.16
2745 2849 1.535687 AAGGACCTACCCGTGCACT 60.536 57.895 16.19 0.00 40.05 4.40
2746 2850 1.375523 CAAGGACCTACCCGTGCAC 60.376 63.158 6.82 6.82 40.05 4.57
2747 2851 1.122632 TTCAAGGACCTACCCGTGCA 61.123 55.000 0.00 0.00 40.05 4.57
2748 2852 0.672711 GTTCAAGGACCTACCCGTGC 60.673 60.000 0.00 0.00 40.05 5.34
2749 2853 0.974383 AGTTCAAGGACCTACCCGTG 59.026 55.000 0.00 0.00 40.05 4.94
2750 2854 0.974383 CAGTTCAAGGACCTACCCGT 59.026 55.000 0.00 0.00 40.05 5.28
2751 2855 0.974383 ACAGTTCAAGGACCTACCCG 59.026 55.000 0.00 0.00 40.05 5.28
2752 2856 3.181448 TGAAACAGTTCAAGGACCTACCC 60.181 47.826 0.00 0.00 40.87 3.69
2753 2857 4.081322 TGAAACAGTTCAAGGACCTACC 57.919 45.455 0.00 0.00 40.87 3.18
2763 2867 3.013921 GTGACACCCTTGAAACAGTTCA 58.986 45.455 0.00 0.00 42.12 3.18
2764 2868 2.031683 CGTGACACCCTTGAAACAGTTC 59.968 50.000 0.00 0.00 0.00 3.01
2765 2869 2.014128 CGTGACACCCTTGAAACAGTT 58.986 47.619 0.00 0.00 0.00 3.16
2766 2870 1.065709 ACGTGACACCCTTGAAACAGT 60.066 47.619 0.00 0.00 0.00 3.55
2767 2871 1.663695 ACGTGACACCCTTGAAACAG 58.336 50.000 0.00 0.00 0.00 3.16
2768 2872 2.484065 CCTACGTGACACCCTTGAAACA 60.484 50.000 0.00 0.00 0.00 2.83
2769 2873 2.140717 CCTACGTGACACCCTTGAAAC 58.859 52.381 0.00 0.00 0.00 2.78
2770 2874 1.764134 ACCTACGTGACACCCTTGAAA 59.236 47.619 0.00 0.00 0.00 2.69
2771 2875 1.342174 GACCTACGTGACACCCTTGAA 59.658 52.381 0.00 0.00 0.00 2.69
2772 2876 0.963962 GACCTACGTGACACCCTTGA 59.036 55.000 0.00 0.00 0.00 3.02
2773 2877 0.037605 GGACCTACGTGACACCCTTG 60.038 60.000 0.00 0.00 0.00 3.61
2774 2878 0.178941 AGGACCTACGTGACACCCTT 60.179 55.000 0.00 0.00 0.00 3.95
2775 2879 0.611340 GAGGACCTACGTGACACCCT 60.611 60.000 0.00 0.00 0.00 4.34
2776 2880 0.896940 TGAGGACCTACGTGACACCC 60.897 60.000 0.00 0.00 0.00 4.61
2777 2881 0.963962 TTGAGGACCTACGTGACACC 59.036 55.000 0.00 0.00 0.00 4.16
2778 2882 2.035576 ACTTTGAGGACCTACGTGACAC 59.964 50.000 0.00 0.00 0.00 3.67
2779 2883 2.313317 ACTTTGAGGACCTACGTGACA 58.687 47.619 0.00 0.00 0.00 3.58
2780 2884 4.157289 TCATACTTTGAGGACCTACGTGAC 59.843 45.833 0.00 0.00 0.00 3.67
2781 2885 4.338012 TCATACTTTGAGGACCTACGTGA 58.662 43.478 0.00 0.00 0.00 4.35
2782 2886 4.713824 TCATACTTTGAGGACCTACGTG 57.286 45.455 0.00 0.00 0.00 4.49
2783 2887 5.733620 TTTCATACTTTGAGGACCTACGT 57.266 39.130 0.00 0.00 35.27 3.57
2784 2888 6.019801 CGATTTTCATACTTTGAGGACCTACG 60.020 42.308 0.00 0.00 35.27 3.51
2785 2889 6.238130 GCGATTTTCATACTTTGAGGACCTAC 60.238 42.308 0.00 0.00 35.27 3.18
2786 2890 5.815740 GCGATTTTCATACTTTGAGGACCTA 59.184 40.000 0.00 0.00 35.27 3.08
2787 2891 4.636206 GCGATTTTCATACTTTGAGGACCT 59.364 41.667 0.00 0.00 35.27 3.85
2788 2892 4.201920 GGCGATTTTCATACTTTGAGGACC 60.202 45.833 0.00 0.00 35.27 4.46
2789 2893 4.394920 TGGCGATTTTCATACTTTGAGGAC 59.605 41.667 0.00 0.00 35.27 3.85
2790 2894 4.584874 TGGCGATTTTCATACTTTGAGGA 58.415 39.130 0.00 0.00 35.27 3.71
2791 2895 4.963276 TGGCGATTTTCATACTTTGAGG 57.037 40.909 0.00 0.00 35.27 3.86
2792 2896 5.066375 TGGATGGCGATTTTCATACTTTGAG 59.934 40.000 0.00 0.00 35.27 3.02
2793 2897 4.946772 TGGATGGCGATTTTCATACTTTGA 59.053 37.500 0.00 0.00 0.00 2.69
2794 2898 5.247507 TGGATGGCGATTTTCATACTTTG 57.752 39.130 0.00 0.00 0.00 2.77
2795 2899 4.339247 CCTGGATGGCGATTTTCATACTTT 59.661 41.667 0.00 0.00 0.00 2.66
2796 2900 3.885297 CCTGGATGGCGATTTTCATACTT 59.115 43.478 0.00 0.00 0.00 2.24
2797 2901 3.117888 ACCTGGATGGCGATTTTCATACT 60.118 43.478 0.00 0.00 40.22 2.12
2798 2902 3.214328 ACCTGGATGGCGATTTTCATAC 58.786 45.455 0.00 0.00 40.22 2.39
2799 2903 3.476552 GACCTGGATGGCGATTTTCATA 58.523 45.455 0.00 0.00 40.22 2.15
2800 2904 2.301346 GACCTGGATGGCGATTTTCAT 58.699 47.619 0.00 0.00 40.22 2.57
2801 2905 1.681780 GGACCTGGATGGCGATTTTCA 60.682 52.381 0.00 0.00 40.22 2.69
2802 2906 1.025041 GGACCTGGATGGCGATTTTC 58.975 55.000 0.00 0.00 40.22 2.29
2803 2907 0.625849 AGGACCTGGATGGCGATTTT 59.374 50.000 0.00 0.00 40.22 1.82
2804 2908 0.181350 GAGGACCTGGATGGCGATTT 59.819 55.000 0.00 0.00 40.22 2.17
2805 2909 0.982852 TGAGGACCTGGATGGCGATT 60.983 55.000 0.00 0.00 40.22 3.34
2806 2910 0.982852 TTGAGGACCTGGATGGCGAT 60.983 55.000 0.00 0.00 40.22 4.58
2807 2911 1.198094 TTTGAGGACCTGGATGGCGA 61.198 55.000 0.00 0.00 40.22 5.54
2808 2912 0.745845 CTTTGAGGACCTGGATGGCG 60.746 60.000 0.00 0.00 40.22 5.69
2809 2913 0.329596 ACTTTGAGGACCTGGATGGC 59.670 55.000 0.00 0.00 40.22 4.40
2810 2914 4.656112 ACTATACTTTGAGGACCTGGATGG 59.344 45.833 0.00 0.00 42.93 3.51
2811 2915 5.878406 ACTATACTTTGAGGACCTGGATG 57.122 43.478 0.00 0.00 0.00 3.51
2812 2916 7.070074 CACTTACTATACTTTGAGGACCTGGAT 59.930 40.741 0.00 0.00 0.00 3.41
2813 2917 6.380274 CACTTACTATACTTTGAGGACCTGGA 59.620 42.308 0.00 0.00 0.00 3.86
2814 2918 6.154706 ACACTTACTATACTTTGAGGACCTGG 59.845 42.308 0.00 0.00 0.00 4.45
2815 2919 7.036220 CACACTTACTATACTTTGAGGACCTG 58.964 42.308 0.00 0.00 0.00 4.00
2816 2920 6.724905 ACACACTTACTATACTTTGAGGACCT 59.275 38.462 0.00 0.00 0.00 3.85
2817 2921 6.932947 ACACACTTACTATACTTTGAGGACC 58.067 40.000 0.00 0.00 0.00 4.46
2818 2922 7.600065 TGACACACTTACTATACTTTGAGGAC 58.400 38.462 0.00 0.00 0.00 3.85
2819 2923 7.770366 TGACACACTTACTATACTTTGAGGA 57.230 36.000 0.00 0.00 0.00 3.71
2820 2924 7.010552 GCATGACACACTTACTATACTTTGAGG 59.989 40.741 0.00 0.00 0.00 3.86
2821 2925 7.761704 AGCATGACACACTTACTATACTTTGAG 59.238 37.037 0.00 0.00 0.00 3.02
2822 2926 7.611770 AGCATGACACACTTACTATACTTTGA 58.388 34.615 0.00 0.00 0.00 2.69
2823 2927 7.834068 AGCATGACACACTTACTATACTTTG 57.166 36.000 0.00 0.00 0.00 2.77
2824 2928 8.198109 CCTAGCATGACACACTTACTATACTTT 58.802 37.037 0.00 0.00 0.00 2.66
2825 2929 7.684670 GCCTAGCATGACACACTTACTATACTT 60.685 40.741 0.00 0.00 0.00 2.24
2826 2930 6.239064 GCCTAGCATGACACACTTACTATACT 60.239 42.308 0.00 0.00 0.00 2.12
2827 2931 5.921408 GCCTAGCATGACACACTTACTATAC 59.079 44.000 0.00 0.00 0.00 1.47
2828 2932 5.596772 TGCCTAGCATGACACACTTACTATA 59.403 40.000 0.00 0.00 31.71 1.31
2829 2933 4.405680 TGCCTAGCATGACACACTTACTAT 59.594 41.667 0.00 0.00 31.71 2.12
2830 2934 3.767131 TGCCTAGCATGACACACTTACTA 59.233 43.478 0.00 0.00 31.71 1.82
2831 2935 2.567169 TGCCTAGCATGACACACTTACT 59.433 45.455 0.00 0.00 31.71 2.24
2832 2936 2.972625 TGCCTAGCATGACACACTTAC 58.027 47.619 0.00 0.00 31.71 2.34
2833 2937 3.694043 TTGCCTAGCATGACACACTTA 57.306 42.857 0.00 0.00 38.76 2.24
2834 2938 2.566833 TTGCCTAGCATGACACACTT 57.433 45.000 0.00 0.00 38.76 3.16
2835 2939 2.566833 TTTGCCTAGCATGACACACT 57.433 45.000 0.00 0.00 38.76 3.55
2836 2940 3.855689 ATTTTGCCTAGCATGACACAC 57.144 42.857 0.00 0.00 38.76 3.82
2837 2941 5.764686 CCTATATTTTGCCTAGCATGACACA 59.235 40.000 0.00 0.00 38.76 3.72
2838 2942 5.765182 ACCTATATTTTGCCTAGCATGACAC 59.235 40.000 0.00 0.00 38.76 3.67
2839 2943 5.940617 ACCTATATTTTGCCTAGCATGACA 58.059 37.500 0.00 0.00 38.76 3.58
2840 2944 5.412904 GGACCTATATTTTGCCTAGCATGAC 59.587 44.000 0.00 0.00 38.76 3.06
2841 2945 5.310594 AGGACCTATATTTTGCCTAGCATGA 59.689 40.000 0.00 0.00 38.76 3.07
2842 2946 5.564550 AGGACCTATATTTTGCCTAGCATG 58.435 41.667 0.00 0.00 38.76 4.06
2843 2947 5.569630 CGAGGACCTATATTTTGCCTAGCAT 60.570 44.000 0.00 0.00 38.76 3.79
2844 2948 4.262463 CGAGGACCTATATTTTGCCTAGCA 60.262 45.833 0.00 0.00 36.47 3.49
2845 2949 4.246458 CGAGGACCTATATTTTGCCTAGC 58.754 47.826 0.00 0.00 0.00 3.42
2846 2950 4.527038 TCCGAGGACCTATATTTTGCCTAG 59.473 45.833 0.00 0.00 0.00 3.02
2847 2951 4.282703 GTCCGAGGACCTATATTTTGCCTA 59.717 45.833 11.07 0.00 39.08 3.93
2848 2952 3.071167 GTCCGAGGACCTATATTTTGCCT 59.929 47.826 11.07 0.00 39.08 4.75
2849 2953 3.071167 AGTCCGAGGACCTATATTTTGCC 59.929 47.826 17.85 0.00 45.59 4.52
2850 2954 4.338379 AGTCCGAGGACCTATATTTTGC 57.662 45.455 17.85 0.00 45.59 3.68
2851 2955 6.651975 AGTAGTCCGAGGACCTATATTTTG 57.348 41.667 17.85 0.00 45.59 2.44
2852 2956 7.672122 AAAGTAGTCCGAGGACCTATATTTT 57.328 36.000 17.85 10.49 45.59 1.82
2853 2957 8.003629 ACTAAAGTAGTCCGAGGACCTATATTT 58.996 37.037 17.85 13.60 45.59 1.40
2854 2958 7.447853 CACTAAAGTAGTCCGAGGACCTATATT 59.552 40.741 17.85 9.96 45.59 1.28
2855 2959 6.941436 CACTAAAGTAGTCCGAGGACCTATAT 59.059 42.308 17.85 2.71 45.59 0.86
2856 2960 6.126652 ACACTAAAGTAGTCCGAGGACCTATA 60.127 42.308 17.85 2.46 45.59 1.31
2857 2961 5.131784 CACTAAAGTAGTCCGAGGACCTAT 58.868 45.833 17.85 3.42 45.59 2.57
2858 2962 4.018960 ACACTAAAGTAGTCCGAGGACCTA 60.019 45.833 17.85 7.76 45.59 3.08
2859 2963 3.245193 ACACTAAAGTAGTCCGAGGACCT 60.245 47.826 17.85 6.91 45.59 3.85
2860 2964 3.087781 ACACTAAAGTAGTCCGAGGACC 58.912 50.000 17.85 4.70 45.59 4.46
2861 2965 4.217118 TCAACACTAAAGTAGTCCGAGGAC 59.783 45.833 14.10 14.10 44.86 3.85
2862 2966 4.401022 TCAACACTAAAGTAGTCCGAGGA 58.599 43.478 0.00 0.00 36.76 3.71
2863 2967 4.778534 TCAACACTAAAGTAGTCCGAGG 57.221 45.455 0.00 0.00 36.76 4.63
2864 2968 5.629849 CAGTTCAACACTAAAGTAGTCCGAG 59.370 44.000 0.00 0.00 36.76 4.63
2865 2969 5.300034 TCAGTTCAACACTAAAGTAGTCCGA 59.700 40.000 0.00 0.00 36.76 4.55
2866 2970 5.526115 TCAGTTCAACACTAAAGTAGTCCG 58.474 41.667 0.00 0.00 36.76 4.79
2867 2971 7.964604 AATCAGTTCAACACTAAAGTAGTCC 57.035 36.000 0.00 0.00 36.76 3.85
2868 2972 9.651718 CAAAATCAGTTCAACACTAAAGTAGTC 57.348 33.333 0.00 0.00 36.76 2.59
2869 2973 8.621286 CCAAAATCAGTTCAACACTAAAGTAGT 58.379 33.333 0.00 0.00 40.28 2.73
2870 2974 8.836413 TCCAAAATCAGTTCAACACTAAAGTAG 58.164 33.333 0.00 0.00 32.76 2.57
2871 2975 8.617809 GTCCAAAATCAGTTCAACACTAAAGTA 58.382 33.333 0.00 0.00 32.76 2.24
2872 2976 7.416326 GGTCCAAAATCAGTTCAACACTAAAGT 60.416 37.037 0.00 0.00 32.76 2.66
2873 2977 6.918022 GGTCCAAAATCAGTTCAACACTAAAG 59.082 38.462 0.00 0.00 32.76 1.85
2874 2978 6.605594 AGGTCCAAAATCAGTTCAACACTAAA 59.394 34.615 0.00 0.00 32.76 1.85
2875 2979 6.039270 CAGGTCCAAAATCAGTTCAACACTAA 59.961 38.462 0.00 0.00 32.76 2.24
2876 2980 5.530915 CAGGTCCAAAATCAGTTCAACACTA 59.469 40.000 0.00 0.00 32.76 2.74
2877 2981 4.339247 CAGGTCCAAAATCAGTTCAACACT 59.661 41.667 0.00 0.00 35.35 3.55
2878 2982 4.499696 CCAGGTCCAAAATCAGTTCAACAC 60.500 45.833 0.00 0.00 0.00 3.32
2879 2983 3.636300 CCAGGTCCAAAATCAGTTCAACA 59.364 43.478 0.00 0.00 0.00 3.33
2880 2984 3.888930 TCCAGGTCCAAAATCAGTTCAAC 59.111 43.478 0.00 0.00 0.00 3.18
2881 2985 4.177537 TCCAGGTCCAAAATCAGTTCAA 57.822 40.909 0.00 0.00 0.00 2.69
2882 2986 3.874383 TCCAGGTCCAAAATCAGTTCA 57.126 42.857 0.00 0.00 0.00 3.18
2883 2987 4.156739 GTCATCCAGGTCCAAAATCAGTTC 59.843 45.833 0.00 0.00 0.00 3.01
2884 2988 4.082125 GTCATCCAGGTCCAAAATCAGTT 58.918 43.478 0.00 0.00 0.00 3.16
2885 2989 3.074390 TGTCATCCAGGTCCAAAATCAGT 59.926 43.478 0.00 0.00 0.00 3.41
2886 2990 3.441572 GTGTCATCCAGGTCCAAAATCAG 59.558 47.826 0.00 0.00 0.00 2.90
2887 2991 3.181435 TGTGTCATCCAGGTCCAAAATCA 60.181 43.478 0.00 0.00 0.00 2.57
2888 2992 3.191371 GTGTGTCATCCAGGTCCAAAATC 59.809 47.826 0.00 0.00 0.00 2.17
2889 2993 3.157087 GTGTGTCATCCAGGTCCAAAAT 58.843 45.455 0.00 0.00 0.00 1.82
2890 2994 2.174639 AGTGTGTCATCCAGGTCCAAAA 59.825 45.455 0.00 0.00 0.00 2.44
2891 2995 1.774254 AGTGTGTCATCCAGGTCCAAA 59.226 47.619 0.00 0.00 0.00 3.28
2892 2996 1.434188 AGTGTGTCATCCAGGTCCAA 58.566 50.000 0.00 0.00 0.00 3.53
2893 2997 1.434188 AAGTGTGTCATCCAGGTCCA 58.566 50.000 0.00 0.00 0.00 4.02
2894 2998 3.914426 ATAAGTGTGTCATCCAGGTCC 57.086 47.619 0.00 0.00 0.00 4.46
2895 2999 5.581085 GTGTAATAAGTGTGTCATCCAGGTC 59.419 44.000 0.00 0.00 0.00 3.85
2896 3000 5.248477 AGTGTAATAAGTGTGTCATCCAGGT 59.752 40.000 0.00 0.00 0.00 4.00
2897 3001 5.734720 AGTGTAATAAGTGTGTCATCCAGG 58.265 41.667 0.00 0.00 0.00 4.45
2898 3002 7.672983 AAAGTGTAATAAGTGTGTCATCCAG 57.327 36.000 0.00 0.00 0.00 3.86
2899 3003 9.214957 CTTAAAGTGTAATAAGTGTGTCATCCA 57.785 33.333 0.00 0.00 0.00 3.41
2900 3004 8.665685 CCTTAAAGTGTAATAAGTGTGTCATCC 58.334 37.037 0.00 0.00 0.00 3.51
2901 3005 9.431887 TCCTTAAAGTGTAATAAGTGTGTCATC 57.568 33.333 0.00 0.00 0.00 2.92
2902 3006 9.216117 GTCCTTAAAGTGTAATAAGTGTGTCAT 57.784 33.333 0.00 0.00 0.00 3.06
2903 3007 7.658575 GGTCCTTAAAGTGTAATAAGTGTGTCA 59.341 37.037 0.00 0.00 0.00 3.58
2904 3008 7.876582 AGGTCCTTAAAGTGTAATAAGTGTGTC 59.123 37.037 0.00 0.00 0.00 3.67
2905 3009 7.742767 AGGTCCTTAAAGTGTAATAAGTGTGT 58.257 34.615 0.00 0.00 0.00 3.72
2906 3010 9.367444 CTAGGTCCTTAAAGTGTAATAAGTGTG 57.633 37.037 0.00 0.00 0.00 3.82
2907 3011 9.317827 TCTAGGTCCTTAAAGTGTAATAAGTGT 57.682 33.333 0.00 0.00 0.00 3.55
2908 3012 9.583765 GTCTAGGTCCTTAAAGTGTAATAAGTG 57.416 37.037 0.00 0.00 0.00 3.16
2909 3013 8.465201 CGTCTAGGTCCTTAAAGTGTAATAAGT 58.535 37.037 0.00 0.00 0.00 2.24
2910 3014 8.680903 TCGTCTAGGTCCTTAAAGTGTAATAAG 58.319 37.037 0.00 0.00 0.00 1.73
2911 3015 8.579850 TCGTCTAGGTCCTTAAAGTGTAATAA 57.420 34.615 0.00 0.00 0.00 1.40
2912 3016 8.627403 CATCGTCTAGGTCCTTAAAGTGTAATA 58.373 37.037 0.00 0.00 0.00 0.98
2913 3017 7.341256 TCATCGTCTAGGTCCTTAAAGTGTAAT 59.659 37.037 0.00 0.00 0.00 1.89
2914 3018 6.660521 TCATCGTCTAGGTCCTTAAAGTGTAA 59.339 38.462 0.00 0.00 0.00 2.41
2915 3019 6.182627 TCATCGTCTAGGTCCTTAAAGTGTA 58.817 40.000 0.00 0.00 0.00 2.90
2916 3020 5.014858 TCATCGTCTAGGTCCTTAAAGTGT 58.985 41.667 0.00 0.00 0.00 3.55
2917 3021 5.578005 TCATCGTCTAGGTCCTTAAAGTG 57.422 43.478 0.00 0.00 0.00 3.16
2918 3022 6.793505 AATCATCGTCTAGGTCCTTAAAGT 57.206 37.500 0.00 0.00 0.00 2.66
2919 3023 7.764443 TGAAAATCATCGTCTAGGTCCTTAAAG 59.236 37.037 0.00 0.00 0.00 1.85
2920 3024 7.617225 TGAAAATCATCGTCTAGGTCCTTAAA 58.383 34.615 0.00 0.00 0.00 1.52
2921 3025 7.177832 TGAAAATCATCGTCTAGGTCCTTAA 57.822 36.000 0.00 0.00 0.00 1.85
2922 3026 6.785337 TGAAAATCATCGTCTAGGTCCTTA 57.215 37.500 0.00 0.00 0.00 2.69
2923 3027 5.677319 TGAAAATCATCGTCTAGGTCCTT 57.323 39.130 0.00 0.00 0.00 3.36
2924 3028 5.878406 ATGAAAATCATCGTCTAGGTCCT 57.122 39.130 0.00 0.00 29.59 3.85
2925 3029 6.750148 ACTATGAAAATCATCGTCTAGGTCC 58.250 40.000 0.00 0.00 38.26 4.46
2926 3030 8.543774 CAAACTATGAAAATCATCGTCTAGGTC 58.456 37.037 0.00 0.00 38.26 3.85
2927 3031 8.258007 TCAAACTATGAAAATCATCGTCTAGGT 58.742 33.333 0.00 0.00 38.26 3.08
2928 3032 8.648557 TCAAACTATGAAAATCATCGTCTAGG 57.351 34.615 0.00 0.00 38.26 3.02
2929 3033 8.759641 CCTCAAACTATGAAAATCATCGTCTAG 58.240 37.037 0.00 0.00 38.26 2.43
2930 3034 8.474831 TCCTCAAACTATGAAAATCATCGTCTA 58.525 33.333 0.00 0.00 38.26 2.59
2931 3035 7.278868 GTCCTCAAACTATGAAAATCATCGTCT 59.721 37.037 0.00 0.00 38.26 4.18
2932 3036 7.402640 GTCCTCAAACTATGAAAATCATCGTC 58.597 38.462 0.00 0.00 38.26 4.20
2933 3037 6.316390 GGTCCTCAAACTATGAAAATCATCGT 59.684 38.462 0.00 0.00 38.26 3.73
2934 3038 6.540189 AGGTCCTCAAACTATGAAAATCATCG 59.460 38.462 0.00 0.00 38.26 3.84
2935 3039 7.872113 AGGTCCTCAAACTATGAAAATCATC 57.128 36.000 0.00 0.00 38.26 2.92
2936 3040 7.495934 CGTAGGTCCTCAAACTATGAAAATCAT 59.504 37.037 0.00 0.00 40.72 2.45
2937 3041 6.816640 CGTAGGTCCTCAAACTATGAAAATCA 59.183 38.462 0.00 0.00 37.67 2.57
2938 3042 6.817140 ACGTAGGTCCTCAAACTATGAAAATC 59.183 38.462 0.00 0.00 37.67 2.17
2939 3043 6.594159 CACGTAGGTCCTCAAACTATGAAAAT 59.406 38.462 0.00 0.00 37.67 1.82
2940 3044 5.929992 CACGTAGGTCCTCAAACTATGAAAA 59.070 40.000 0.00 0.00 37.67 2.29
2941 3045 5.244402 TCACGTAGGTCCTCAAACTATGAAA 59.756 40.000 0.00 0.00 37.67 2.69
2942 3046 4.768448 TCACGTAGGTCCTCAAACTATGAA 59.232 41.667 0.00 0.00 37.67 2.57
2943 3047 4.157289 GTCACGTAGGTCCTCAAACTATGA 59.843 45.833 0.00 0.00 36.38 2.15
2944 3048 4.082408 TGTCACGTAGGTCCTCAAACTATG 60.082 45.833 0.00 0.00 0.00 2.23
2945 3049 4.082354 GTGTCACGTAGGTCCTCAAACTAT 60.082 45.833 0.00 0.00 0.00 2.12
2946 3050 3.254166 GTGTCACGTAGGTCCTCAAACTA 59.746 47.826 0.00 0.00 0.00 2.24
2947 3051 2.035576 GTGTCACGTAGGTCCTCAAACT 59.964 50.000 0.00 0.00 0.00 2.66
2948 3052 2.401351 GTGTCACGTAGGTCCTCAAAC 58.599 52.381 0.00 0.00 0.00 2.93
2949 3053 1.342174 GGTGTCACGTAGGTCCTCAAA 59.658 52.381 0.00 0.00 0.00 2.69
2950 3054 0.963962 GGTGTCACGTAGGTCCTCAA 59.036 55.000 0.00 0.00 0.00 3.02
2951 3055 0.111832 AGGTGTCACGTAGGTCCTCA 59.888 55.000 0.00 0.00 0.00 3.86
2952 3056 0.526662 CAGGTGTCACGTAGGTCCTC 59.473 60.000 0.00 0.00 0.00 3.71
2953 3057 0.178970 ACAGGTGTCACGTAGGTCCT 60.179 55.000 0.00 0.00 0.00 3.85
2954 3058 0.038526 CACAGGTGTCACGTAGGTCC 60.039 60.000 0.00 0.00 0.00 4.46
2955 3059 0.956633 TCACAGGTGTCACGTAGGTC 59.043 55.000 0.00 0.00 0.00 3.85
2956 3060 1.340248 CTTCACAGGTGTCACGTAGGT 59.660 52.381 0.00 0.00 0.00 3.08
2957 3061 1.340248 ACTTCACAGGTGTCACGTAGG 59.660 52.381 0.00 0.00 0.00 3.18
2958 3062 2.795175 ACTTCACAGGTGTCACGTAG 57.205 50.000 0.00 0.00 0.00 3.51
2959 3063 3.216800 ACTACTTCACAGGTGTCACGTA 58.783 45.455 0.00 0.00 0.00 3.57
2960 3064 2.029623 ACTACTTCACAGGTGTCACGT 58.970 47.619 0.00 0.00 0.00 4.49
2961 3065 2.795175 ACTACTTCACAGGTGTCACG 57.205 50.000 0.00 0.00 0.00 4.35
2962 3066 4.051922 CTGAACTACTTCACAGGTGTCAC 58.948 47.826 0.00 0.00 32.68 3.67
2963 3067 3.069586 CCTGAACTACTTCACAGGTGTCA 59.930 47.826 0.00 0.00 43.16 3.58
2964 3068 3.555168 CCCTGAACTACTTCACAGGTGTC 60.555 52.174 0.00 0.00 45.65 3.67
2965 3069 2.368875 CCCTGAACTACTTCACAGGTGT 59.631 50.000 0.00 0.00 45.65 4.16
2966 3070 2.632996 TCCCTGAACTACTTCACAGGTG 59.367 50.000 0.00 0.00 45.65 4.00
2967 3071 2.633481 GTCCCTGAACTACTTCACAGGT 59.367 50.000 0.00 0.00 45.65 4.00
2968 3072 2.028020 GGTCCCTGAACTACTTCACAGG 60.028 54.545 0.00 0.00 46.37 4.00
2969 3073 2.900546 AGGTCCCTGAACTACTTCACAG 59.099 50.000 0.00 0.00 32.68 3.66
2970 3074 2.972348 AGGTCCCTGAACTACTTCACA 58.028 47.619 0.00 0.00 32.68 3.58
2971 3075 4.342359 TCTAGGTCCCTGAACTACTTCAC 58.658 47.826 0.00 0.00 32.68 3.18
2972 3076 4.669866 TCTAGGTCCCTGAACTACTTCA 57.330 45.455 0.00 0.00 35.04 3.02
2973 3077 5.682730 GCATTCTAGGTCCCTGAACTACTTC 60.683 48.000 0.00 0.00 29.72 3.01
2974 3078 4.162509 GCATTCTAGGTCCCTGAACTACTT 59.837 45.833 0.00 0.00 29.72 2.24
2975 3079 3.707102 GCATTCTAGGTCCCTGAACTACT 59.293 47.826 0.00 0.00 29.72 2.57
2976 3080 3.451178 TGCATTCTAGGTCCCTGAACTAC 59.549 47.826 0.00 0.00 29.72 2.73
2977 3081 3.451178 GTGCATTCTAGGTCCCTGAACTA 59.549 47.826 0.00 0.00 29.72 2.24
2978 3082 2.237392 GTGCATTCTAGGTCCCTGAACT 59.763 50.000 0.00 0.00 32.68 3.01
2979 3083 2.237392 AGTGCATTCTAGGTCCCTGAAC 59.763 50.000 0.00 0.00 0.00 3.18
2980 3084 2.551270 AGTGCATTCTAGGTCCCTGAA 58.449 47.619 0.00 0.00 0.00 3.02
2981 3085 2.254152 AGTGCATTCTAGGTCCCTGA 57.746 50.000 0.00 0.00 0.00 3.86
2982 3086 2.237143 TGAAGTGCATTCTAGGTCCCTG 59.763 50.000 0.00 0.00 38.83 4.45
2983 3087 2.237392 GTGAAGTGCATTCTAGGTCCCT 59.763 50.000 0.00 0.00 38.83 4.20
2984 3088 2.237392 AGTGAAGTGCATTCTAGGTCCC 59.763 50.000 0.00 0.00 38.83 4.46
2985 3089 3.196685 AGAGTGAAGTGCATTCTAGGTCC 59.803 47.826 0.00 0.00 41.25 4.46
2986 3090 4.081972 TCAGAGTGAAGTGCATTCTAGGTC 60.082 45.833 0.00 0.00 41.13 3.85
2987 3091 3.834813 TCAGAGTGAAGTGCATTCTAGGT 59.165 43.478 0.00 0.00 41.13 3.08
2988 3092 4.462508 TCAGAGTGAAGTGCATTCTAGG 57.537 45.455 0.00 0.00 41.13 3.02
2989 3093 6.981762 AAATCAGAGTGAAGTGCATTCTAG 57.018 37.500 0.00 0.00 41.13 2.43
2991 3095 9.107177 CTTATAAATCAGAGTGAAGTGCATTCT 57.893 33.333 0.00 0.00 43.54 2.40
2992 3096 8.887717 ACTTATAAATCAGAGTGAAGTGCATTC 58.112 33.333 0.00 0.00 38.50 2.67
2993 3097 8.798859 ACTTATAAATCAGAGTGAAGTGCATT 57.201 30.769 0.00 0.00 0.00 3.56
3027 3131 4.081972 TCAGACTGAAGTGCATTCTAGGTC 60.082 45.833 1.64 6.05 34.62 3.85
3028 3132 3.834813 TCAGACTGAAGTGCATTCTAGGT 59.165 43.478 1.64 0.00 34.62 3.08
3029 3133 4.462508 TCAGACTGAAGTGCATTCTAGG 57.537 45.455 1.64 0.00 34.62 3.02
3030 3134 5.049167 GGATCAGACTGAAGTGCATTCTAG 58.951 45.833 9.70 0.00 34.62 2.43
3031 3135 4.713814 AGGATCAGACTGAAGTGCATTCTA 59.286 41.667 9.70 0.00 34.62 2.10
3032 3136 3.518705 AGGATCAGACTGAAGTGCATTCT 59.481 43.478 9.70 0.00 37.02 2.40
3033 3137 3.871485 AGGATCAGACTGAAGTGCATTC 58.129 45.455 9.70 0.24 38.50 2.67
3034 3138 3.996921 AGGATCAGACTGAAGTGCATT 57.003 42.857 9.70 0.00 0.00 3.56
3036 3140 2.369860 ACAAGGATCAGACTGAAGTGCA 59.630 45.455 9.70 0.00 0.00 4.57
3037 3141 3.051081 ACAAGGATCAGACTGAAGTGC 57.949 47.619 9.70 0.00 0.00 4.40
3039 3143 3.244700 CCCAACAAGGATCAGACTGAAGT 60.245 47.826 9.70 0.00 41.22 3.01
3040 3144 3.008375 TCCCAACAAGGATCAGACTGAAG 59.992 47.826 9.70 0.43 41.22 3.02
3041 3145 2.978978 TCCCAACAAGGATCAGACTGAA 59.021 45.455 9.70 0.00 41.22 3.02
3042 3146 2.568956 CTCCCAACAAGGATCAGACTGA 59.431 50.000 7.80 7.80 41.22 3.41
3043 3147 2.304180 ACTCCCAACAAGGATCAGACTG 59.696 50.000 0.00 0.00 41.22 3.51
3044 3148 2.569404 GACTCCCAACAAGGATCAGACT 59.431 50.000 0.00 0.00 41.22 3.24
3045 3149 2.303022 TGACTCCCAACAAGGATCAGAC 59.697 50.000 0.00 0.00 41.22 3.51
3046 3150 2.619931 TGACTCCCAACAAGGATCAGA 58.380 47.619 0.00 0.00 41.22 3.27
3047 3151 3.423539 TTGACTCCCAACAAGGATCAG 57.576 47.619 0.00 0.00 41.22 2.90
3048 3152 3.138283 AGTTTGACTCCCAACAAGGATCA 59.862 43.478 0.00 0.00 41.22 2.92
3049 3153 3.503748 CAGTTTGACTCCCAACAAGGATC 59.496 47.826 0.00 0.00 41.22 3.36
3105 3209 3.243724 GCCATGATAGAGGGTCCTAACT 58.756 50.000 0.00 0.00 0.00 2.24
3147 3254 5.452636 GGTTTTAACCTCCTGCATGAAACAA 60.453 40.000 0.00 0.00 45.75 2.83
3272 3379 3.159213 TGATGGAAGTGGAACAGCAAT 57.841 42.857 0.00 0.00 41.80 3.56
3384 3491 5.046087 ACCTTACACCCTTTGGTATAGTCAC 60.046 44.000 0.00 0.00 45.57 3.67
3566 3673 5.270853 CAACTTACACTTTTTGGTCCTTCG 58.729 41.667 0.00 0.00 0.00 3.79
3567 3674 5.041287 GCAACTTACACTTTTTGGTCCTTC 58.959 41.667 0.00 0.00 0.00 3.46
3724 3833 0.944386 CCCAAGTCTTGTTGGTGACG 59.056 55.000 11.61 0.00 44.98 4.35
3887 3996 1.141858 GAGCACTAGGAATGAAGGGGG 59.858 57.143 0.00 0.00 0.00 5.40
4148 4257 6.049149 TCACAAAGTTTAGAGACCAGTTGAG 58.951 40.000 0.00 0.00 0.00 3.02
4149 4258 5.984725 TCACAAAGTTTAGAGACCAGTTGA 58.015 37.500 0.00 0.00 0.00 3.18
4370 4479 1.064685 TCTCGTCAGGGCTGATAGTCA 60.065 52.381 0.00 0.00 42.18 3.41
4379 4488 0.459411 GAGAAGCTTCTCGTCAGGGC 60.459 60.000 34.29 14.90 43.63 5.19
4498 4607 5.415701 ACAACAGCTTGTCTTTCTTCAGAAA 59.584 36.000 2.07 2.07 35.57 2.52
4625 4734 5.554822 TGCCATACAAAATAAACCTCGAC 57.445 39.130 0.00 0.00 0.00 4.20
4765 4874 5.836024 TCCCTAACAATGGTAGTGAGTTT 57.164 39.130 4.46 0.00 0.00 2.66
4766 4875 6.408206 GCTATCCCTAACAATGGTAGTGAGTT 60.408 42.308 4.46 0.00 0.00 3.01
4775 4884 2.158623 TGCTGGCTATCCCTAACAATGG 60.159 50.000 0.00 0.00 0.00 3.16
4796 4905 5.279685 TGCCATTCCATATTTCTTTCCCTT 58.720 37.500 0.00 0.00 0.00 3.95
4817 4926 4.865761 TCCGACGCGCCACTATGC 62.866 66.667 5.73 0.00 0.00 3.14
4886 4995 8.539770 TTGTTTTCTTTTGAATTAGCACAACA 57.460 26.923 0.00 0.00 38.37 3.33
4919 5028 1.221466 CGTTCTTCGTGGCTTGCAGA 61.221 55.000 0.00 0.00 34.52 4.26
4930 5039 6.263344 TGAACATATCTTCCTACGTTCTTCG 58.737 40.000 0.00 0.00 46.00 3.79
4931 5040 7.707035 ACATGAACATATCTTCCTACGTTCTTC 59.293 37.037 0.00 0.00 35.07 2.87
4932 5041 7.556844 ACATGAACATATCTTCCTACGTTCTT 58.443 34.615 0.00 0.00 35.07 2.52
4933 5042 7.113658 ACATGAACATATCTTCCTACGTTCT 57.886 36.000 0.00 0.00 35.07 3.01
4934 5043 7.595502 CCTACATGAACATATCTTCCTACGTTC 59.404 40.741 0.00 0.00 34.69 3.95
4935 5044 7.069578 ACCTACATGAACATATCTTCCTACGTT 59.930 37.037 0.00 0.00 0.00 3.99
4936 5045 6.550108 ACCTACATGAACATATCTTCCTACGT 59.450 38.462 0.00 0.00 0.00 3.57
4937 5046 6.982852 ACCTACATGAACATATCTTCCTACG 58.017 40.000 0.00 0.00 0.00 3.51
4938 5047 8.421784 TGAACCTACATGAACATATCTTCCTAC 58.578 37.037 0.00 0.00 0.00 3.18
4939 5048 8.547481 TGAACCTACATGAACATATCTTCCTA 57.453 34.615 0.00 0.00 0.00 2.94
5005 5125 4.895668 TGGAACTATAAACCACTTCCGT 57.104 40.909 0.00 0.00 34.25 4.69
5007 5127 8.974060 TCATTATGGAACTATAAACCACTTCC 57.026 34.615 0.00 0.00 36.49 3.46
5008 5128 9.614792 ACTCATTATGGAACTATAAACCACTTC 57.385 33.333 0.00 0.00 36.49 3.01
5043 5163 1.078347 GCAAATTGGGTCCCTGGGA 59.922 57.895 12.53 12.53 0.00 4.37
5050 5170 3.055963 TCACATTCCATGCAAATTGGGTC 60.056 43.478 5.01 0.00 34.85 4.46
5057 5178 7.172868 ACTAAATCATCACATTCCATGCAAA 57.827 32.000 0.00 0.00 0.00 3.68
5092 5213 4.020543 GGGTATGGTGGAGTTGCATTTTA 58.979 43.478 0.00 0.00 0.00 1.52
5137 5258 0.680061 GTGATAGGCCGGGGACTAAG 59.320 60.000 4.00 0.00 39.45 2.18
5170 5291 2.515901 GTCCAACCACCTGGCTGT 59.484 61.111 0.00 0.00 39.32 4.40
5192 5313 2.105930 GCAAAAGTGCCGGCAACA 59.894 55.556 34.66 5.51 45.68 3.33
5215 5337 2.243810 ACAAACAACAGGGTGTGTGTT 58.756 42.857 7.46 2.28 45.79 3.32
5218 5340 2.507407 AGACAAACAACAGGGTGTGT 57.493 45.000 0.00 0.00 41.85 3.72
5220 5342 6.040054 GGTTAATTAGACAAACAACAGGGTGT 59.960 38.462 0.00 0.00 0.00 4.16
5221 5343 6.443792 GGTTAATTAGACAAACAACAGGGTG 58.556 40.000 0.00 0.00 0.00 4.61
5222 5344 5.537295 GGGTTAATTAGACAAACAACAGGGT 59.463 40.000 0.00 0.00 0.00 4.34
5224 5346 5.695818 CGGGTTAATTAGACAAACAACAGG 58.304 41.667 0.00 0.00 0.00 4.00
5225 5347 5.151389 GCGGGTTAATTAGACAAACAACAG 58.849 41.667 0.00 0.00 0.00 3.16
5226 5348 4.319622 CGCGGGTTAATTAGACAAACAACA 60.320 41.667 0.00 0.00 0.00 3.33
5227 5349 4.153256 CGCGGGTTAATTAGACAAACAAC 58.847 43.478 0.00 0.00 0.00 3.32
5228 5350 3.365164 GCGCGGGTTAATTAGACAAACAA 60.365 43.478 8.83 0.00 0.00 2.83
5229 5351 2.160022 GCGCGGGTTAATTAGACAAACA 59.840 45.455 8.83 0.00 0.00 2.83
5230 5352 2.417586 AGCGCGGGTTAATTAGACAAAC 59.582 45.455 8.83 0.00 0.00 2.93
5296 5418 4.368577 ACAGCACCTGTGTTCTCGAACA 62.369 50.000 8.32 8.32 43.63 3.18
5314 5436 1.360551 CTATCGCCCGACAGGACAG 59.639 63.158 0.00 0.00 41.02 3.51
5379 5505 0.732880 CTCCACACCGACGATGACAC 60.733 60.000 0.00 0.00 0.00 3.67
5380 5506 1.584495 CTCCACACCGACGATGACA 59.416 57.895 0.00 0.00 0.00 3.58
5381 5507 1.153823 CCTCCACACCGACGATGAC 60.154 63.158 0.00 0.00 0.00 3.06
5383 5509 2.509336 GCCTCCACACCGACGATG 60.509 66.667 0.00 0.00 0.00 3.84
5384 5510 4.129737 CGCCTCCACACCGACGAT 62.130 66.667 0.00 0.00 0.00 3.73
5428 5566 0.179073 CATGAGGGAAGACGCCGAAT 60.179 55.000 0.00 0.00 0.00 3.34
5445 5584 6.431234 GGAGGAAAACAACTCACAGTAATCAT 59.569 38.462 0.00 0.00 35.45 2.45
5460 5599 2.260822 CAGAGGAGAGGGAGGAAAACA 58.739 52.381 0.00 0.00 0.00 2.83
5516 5655 2.169352 ACCGATTAGAGCTGCTGTGAAT 59.831 45.455 7.01 3.30 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.