Multiple sequence alignment - TraesCS4A01G110200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G110200 chr4A 100.000 5256 0 0 1 5256 134535304 134540559 0.000000e+00 9707.0
1 TraesCS4A01G110200 chr4A 88.776 98 8 2 2978 3074 462830428 462830523 3.330000e-22 117.0
2 TraesCS4A01G110200 chr4A 96.667 60 2 0 2079 2138 134537322 134537381 3.350000e-17 100.0
3 TraesCS4A01G110200 chr4A 96.667 60 2 0 2019 2078 134537382 134537441 3.350000e-17 100.0
4 TraesCS4A01G110200 chr4A 100.000 51 0 0 3367 3417 80142822 80142772 1.560000e-15 95.3
5 TraesCS4A01G110200 chr4D 94.328 1146 48 11 3363 4505 337519347 337518216 0.000000e+00 1740.0
6 TraesCS4A01G110200 chr4D 89.637 1293 60 23 684 1936 337522023 337520765 0.000000e+00 1578.0
7 TraesCS4A01G110200 chr4D 88.612 922 69 15 2079 2985 337520619 337519719 0.000000e+00 1088.0
8 TraesCS4A01G110200 chr4D 81.342 611 79 19 3 585 337523130 337522527 1.030000e-126 464.0
9 TraesCS4A01G110200 chr4D 96.838 253 5 3 3071 3321 337519724 337519473 2.260000e-113 420.0
10 TraesCS4A01G110200 chr4D 83.553 456 31 16 4665 5089 337518135 337517693 2.300000e-103 387.0
11 TraesCS4A01G110200 chr4D 96.491 57 1 1 3367 3423 337519353 337519408 5.600000e-15 93.5
12 TraesCS4A01G110200 chr4B 91.967 1195 57 13 765 1935 416643807 416642628 0.000000e+00 1639.0
13 TraesCS4A01G110200 chr4B 96.138 751 23 3 3367 4114 416641212 416640465 0.000000e+00 1221.0
14 TraesCS4A01G110200 chr4B 89.716 914 64 14 2079 2985 416642476 416641586 0.000000e+00 1140.0
15 TraesCS4A01G110200 chr4B 82.884 631 52 25 4665 5256 416639509 416638896 2.810000e-142 516.0
16 TraesCS4A01G110200 chr4B 91.901 284 9 2 3071 3353 416641591 416641321 8.260000e-103 385.0
17 TraesCS4A01G110200 chr4B 90.909 187 11 3 4114 4300 416640411 416640231 4.070000e-61 246.0
18 TraesCS4A01G110200 chr4B 87.923 207 20 5 4299 4505 416640263 416640062 6.800000e-59 239.0
19 TraesCS4A01G110200 chr4B 98.148 54 1 0 3364 3417 507365582 507365635 1.560000e-15 95.3
20 TraesCS4A01G110200 chr3B 90.909 99 6 2 2982 3077 349274765 349274667 4.270000e-26 130.0
21 TraesCS4A01G110200 chr3B 86.364 110 10 5 2969 3074 713874020 713874128 1.200000e-21 115.0
22 TraesCS4A01G110200 chr6D 88.889 99 8 3 2982 3077 7460273 7460175 9.250000e-23 119.0
23 TraesCS4A01G110200 chr6D 98.113 53 1 0 3367 3419 402128365 402128313 5.600000e-15 93.5
24 TraesCS4A01G110200 chr1D 89.362 94 7 3 2982 3074 354500784 354500693 1.200000e-21 115.0
25 TraesCS4A01G110200 chr1D 88.421 95 3 4 2980 3074 196440499 196440585 2.000000e-19 108.0
26 TraesCS4A01G110200 chr1D 89.855 69 3 4 3362 3428 448434969 448434903 9.380000e-13 86.1
27 TraesCS4A01G110200 chr7D 87.879 99 9 2 2978 3074 444375723 444375820 4.300000e-21 113.0
28 TraesCS4A01G110200 chr7A 88.421 95 9 2 2980 3074 590778371 590778463 4.300000e-21 113.0
29 TraesCS4A01G110200 chr2B 85.047 107 12 3 2971 3077 355735683 355735785 7.200000e-19 106.0
30 TraesCS4A01G110200 chr1A 98.113 53 1 0 3367 3419 84012434 84012382 5.600000e-15 93.5
31 TraesCS4A01G110200 chr2D 80.620 129 13 6 2958 3084 548673323 548673205 7.250000e-14 89.8
32 TraesCS4A01G110200 chr5A 91.935 62 5 0 3367 3428 413419534 413419473 2.610000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G110200 chr4A 134535304 134540559 5255 False 3302.333333 9707 97.778000 1 5256 3 chr4A.!!$F2 5255
1 TraesCS4A01G110200 chr4D 337517693 337523130 5437 True 946.166667 1740 89.051667 3 5089 6 chr4D.!!$R1 5086
2 TraesCS4A01G110200 chr4B 416638896 416643807 4911 True 769.428571 1639 90.205429 765 5256 7 chr4B.!!$R1 4491

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
754 1238 0.036732 TCTGACATGTGGGTCCAAGC 59.963 55.0 1.15 0.0 36.97 4.01 F
1962 2482 0.104934 ATCCGGCTCCCCACTAGAAT 60.105 55.0 0.00 0.0 0.00 2.40 F
2460 3053 0.179234 TGCCACAACACCTTCGAAGA 59.821 50.0 26.61 0.0 0.00 2.87 F
3030 3624 0.107831 TTTTGACACTGGGACGGAGG 59.892 55.0 0.00 0.0 38.67 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2379 2972 0.034574 ACGTTGCCATGGCTGGAATA 60.035 50.0 35.53 13.42 46.37 1.75 R
3011 3605 0.107831 CCTCCGTCCCAGTGTCAAAA 59.892 55.0 0.00 0.00 0.00 2.44 R
3988 4683 0.179006 GGCCAGGTGGAATCCTCATC 60.179 60.0 0.00 0.00 35.37 2.92 R
4922 6167 0.034670 AGGACAGGCTTGAATGGCTC 60.035 55.0 1.40 0.00 41.04 4.70 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.618137 GGTGAGACTATAGTTTTCAGGGTTTA 58.382 38.462 16.79 0.00 0.00 2.01
28 29 6.637657 AGACTATAGTTTTCAGGGTTTACCG 58.362 40.000 6.88 0.00 46.96 4.02
29 30 5.737860 ACTATAGTTTTCAGGGTTTACCGG 58.262 41.667 0.00 0.00 46.96 5.28
31 32 1.133730 AGTTTTCAGGGTTTACCGGCA 60.134 47.619 0.00 0.00 46.96 5.69
32 33 1.890489 GTTTTCAGGGTTTACCGGCAT 59.110 47.619 0.00 0.00 46.96 4.40
63 64 1.376037 CTTCGCAGTTGGGTCCTCC 60.376 63.158 0.00 0.00 0.00 4.30
65 66 4.760047 CGCAGTTGGGTCCTCCGG 62.760 72.222 0.00 0.00 38.76 5.14
82 84 3.643978 GCCGCATCTCCGCATGTC 61.644 66.667 0.00 0.00 0.00 3.06
100 111 3.311110 GGTGTGCCCTCGGTGAGA 61.311 66.667 0.00 0.00 0.00 3.27
104 115 0.541063 TGTGCCCTCGGTGAGAACTA 60.541 55.000 0.00 0.00 0.00 2.24
123 134 6.973474 AGAACTACGAGATTTAATGAAGGTCG 59.027 38.462 0.00 0.00 34.34 4.79
124 135 5.589192 ACTACGAGATTTAATGAAGGTCGG 58.411 41.667 0.00 0.00 33.13 4.79
130 141 2.396590 TTAATGAAGGTCGGGCACTC 57.603 50.000 0.00 0.00 0.00 3.51
136 147 0.175073 AAGGTCGGGCACTCGAATAC 59.825 55.000 0.00 0.00 41.05 1.89
140 151 1.876714 CGGGCACTCGAATACGTGG 60.877 63.158 0.00 0.00 40.69 4.94
146 157 2.735134 GCACTCGAATACGTGGTTCTTT 59.265 45.455 0.00 0.00 40.69 2.52
147 158 3.185797 GCACTCGAATACGTGGTTCTTTT 59.814 43.478 0.00 0.00 40.69 2.27
148 159 4.698276 CACTCGAATACGTGGTTCTTTTG 58.302 43.478 0.00 0.00 40.69 2.44
167 179 1.961394 TGGTTGTGACGCTACTTCTCT 59.039 47.619 0.78 0.00 0.00 3.10
172 184 4.617808 TGTGACGCTACTTCTCTATGAC 57.382 45.455 0.00 0.00 0.00 3.06
181 193 5.392595 GCTACTTCTCTATGACGATGATCCC 60.393 48.000 0.00 0.00 0.00 3.85
208 220 4.324254 GGAGTGGGGATCAACAATGTTAGA 60.324 45.833 0.00 0.00 0.00 2.10
210 222 6.409234 GGAGTGGGGATCAACAATGTTAGATA 60.409 42.308 0.00 0.00 0.00 1.98
212 224 6.386927 AGTGGGGATCAACAATGTTAGATAGA 59.613 38.462 0.00 0.00 0.00 1.98
216 228 5.998363 GGATCAACAATGTTAGATAGACCCC 59.002 44.000 0.00 0.00 0.00 4.95
218 230 4.127171 CAACAATGTTAGATAGACCCCGG 58.873 47.826 0.00 0.00 0.00 5.73
219 231 2.104281 ACAATGTTAGATAGACCCCGGC 59.896 50.000 0.00 0.00 0.00 6.13
227 239 2.588856 ATAGACCCCGGCGTTTGAGC 62.589 60.000 6.01 0.00 0.00 4.26
239 253 0.240945 GTTTGAGCGGTTGGATGGTG 59.759 55.000 0.00 0.00 0.00 4.17
247 261 1.153784 GTTGGATGGTGCGGCATTG 60.154 57.895 5.72 0.00 0.00 2.82
267 281 1.153745 CCGCTTTGAGAGGGAGACG 60.154 63.158 0.00 0.00 40.59 4.18
273 287 0.538977 TTGAGAGGGAGACGACGGTT 60.539 55.000 0.00 0.00 0.00 4.44
275 289 0.959372 GAGAGGGAGACGACGGTTGA 60.959 60.000 1.53 0.00 0.00 3.18
276 290 1.212229 GAGGGAGACGACGGTTGAC 59.788 63.158 1.53 0.00 0.00 3.18
278 292 2.260743 GGAGACGACGGTTGACCC 59.739 66.667 1.53 0.00 0.00 4.46
286 304 1.152312 ACGGTTGACCCTGAGGACT 60.152 57.895 0.00 0.00 36.73 3.85
293 311 4.254492 GTTGACCCTGAGGACTTCAATAC 58.746 47.826 0.00 0.00 34.81 1.89
294 312 2.496070 TGACCCTGAGGACTTCAATACG 59.504 50.000 0.00 0.00 34.81 3.06
304 322 8.475331 TGAGGACTTCAATACGATTTTAGTTC 57.525 34.615 0.00 0.00 31.34 3.01
345 363 7.721286 CCACTGATTTGGTCAATAGATCTAC 57.279 40.000 4.10 0.00 36.14 2.59
346 364 7.275183 CCACTGATTTGGTCAATAGATCTACA 58.725 38.462 4.10 0.00 36.14 2.74
353 371 7.558161 TTGGTCAATAGATCTACATGCTTTG 57.442 36.000 4.10 4.97 0.00 2.77
354 372 5.528690 TGGTCAATAGATCTACATGCTTTGC 59.471 40.000 4.10 1.97 0.00 3.68
361 379 4.941263 AGATCTACATGCTTTGCGGTAAAA 59.059 37.500 0.00 0.00 0.00 1.52
371 389 7.954788 TGCTTTGCGGTAAAATAAAAAGAAT 57.045 28.000 0.00 0.00 0.00 2.40
389 407 6.610075 AAGAATTGCAAACATATCCCACTT 57.390 33.333 1.71 0.00 0.00 3.16
397 415 5.300286 GCAAACATATCCCACTTCAGCTAAT 59.700 40.000 0.00 0.00 0.00 1.73
403 421 8.052748 ACATATCCCACTTCAGCTAATTTTACA 58.947 33.333 0.00 0.00 0.00 2.41
405 423 5.876357 TCCCACTTCAGCTAATTTTACACT 58.124 37.500 0.00 0.00 0.00 3.55
408 426 8.764558 TCCCACTTCAGCTAATTTTACACTATA 58.235 33.333 0.00 0.00 0.00 1.31
427 449 7.122650 ACACTATATTTCTGAAAATGTGGGTGG 59.877 37.037 20.71 7.02 36.53 4.61
453 475 2.430921 AGAACCGCTCGCTTGTCG 60.431 61.111 0.00 0.00 40.15 4.35
462 484 1.320852 GCTCGCTTGTCGCTACTAAAC 59.679 52.381 0.00 0.00 38.27 2.01
524 546 0.249955 CCCCCGCAAAAGCAAATCAT 59.750 50.000 0.00 0.00 0.00 2.45
525 547 1.480137 CCCCCGCAAAAGCAAATCATA 59.520 47.619 0.00 0.00 0.00 2.15
548 575 2.574942 GACGGTTCGACGATTAGCC 58.425 57.895 0.00 0.00 37.61 3.93
549 576 0.100146 GACGGTTCGACGATTAGCCT 59.900 55.000 0.00 0.00 37.61 4.58
550 577 0.100146 ACGGTTCGACGATTAGCCTC 59.900 55.000 0.00 0.00 37.61 4.70
551 578 0.594284 CGGTTCGACGATTAGCCTCC 60.594 60.000 0.00 0.00 35.47 4.30
552 579 0.594284 GGTTCGACGATTAGCCTCCG 60.594 60.000 0.00 0.00 0.00 4.63
553 580 0.379669 GTTCGACGATTAGCCTCCGA 59.620 55.000 0.00 0.00 0.00 4.55
554 581 0.661552 TTCGACGATTAGCCTCCGAG 59.338 55.000 0.00 0.00 0.00 4.63
555 582 0.179065 TCGACGATTAGCCTCCGAGA 60.179 55.000 0.00 0.00 0.00 4.04
556 583 0.236187 CGACGATTAGCCTCCGAGAG 59.764 60.000 0.00 0.00 0.00 3.20
557 584 1.595466 GACGATTAGCCTCCGAGAGA 58.405 55.000 0.00 0.00 0.00 3.10
558 585 1.948145 GACGATTAGCCTCCGAGAGAA 59.052 52.381 0.00 0.00 0.00 2.87
559 586 1.677052 ACGATTAGCCTCCGAGAGAAC 59.323 52.381 0.00 0.00 0.00 3.01
560 587 1.001158 CGATTAGCCTCCGAGAGAACC 60.001 57.143 0.00 0.00 0.00 3.62
561 588 2.032620 GATTAGCCTCCGAGAGAACCA 58.967 52.381 0.00 0.00 0.00 3.67
562 589 1.933021 TTAGCCTCCGAGAGAACCAA 58.067 50.000 0.00 0.00 0.00 3.67
563 590 1.933021 TAGCCTCCGAGAGAACCAAA 58.067 50.000 0.00 0.00 0.00 3.28
564 591 1.056660 AGCCTCCGAGAGAACCAAAA 58.943 50.000 0.00 0.00 0.00 2.44
565 592 1.420138 AGCCTCCGAGAGAACCAAAAA 59.580 47.619 0.00 0.00 0.00 1.94
584 611 3.675467 AAAATCAGCCGAAATAGCGAC 57.325 42.857 0.00 0.00 34.64 5.19
585 612 1.209128 AATCAGCCGAAATAGCGACG 58.791 50.000 0.00 0.00 34.64 5.12
586 613 0.102481 ATCAGCCGAAATAGCGACGT 59.898 50.000 0.00 0.00 34.64 4.34
587 614 0.108992 TCAGCCGAAATAGCGACGTT 60.109 50.000 0.00 0.00 34.64 3.99
588 615 0.719465 CAGCCGAAATAGCGACGTTT 59.281 50.000 0.00 0.00 34.64 3.60
589 616 0.997196 AGCCGAAATAGCGACGTTTC 59.003 50.000 0.00 0.00 34.64 2.78
610 637 3.861797 ATTAGCCGCCCAGGGACG 61.862 66.667 10.89 12.67 41.48 4.79
631 658 4.424476 GACAAATCGATCGAAGTAGCAC 57.576 45.455 23.50 7.07 0.00 4.40
632 659 2.852413 ACAAATCGATCGAAGTAGCACG 59.148 45.455 23.50 7.40 0.00 5.34
636 663 1.256284 CGATCGAAGTAGCACGCTCG 61.256 60.000 10.26 0.00 40.44 5.03
638 665 0.248134 ATCGAAGTAGCACGCTCGTC 60.248 55.000 0.00 0.00 32.61 4.20
658 685 3.580193 GCACTGCATAGCCGCCAG 61.580 66.667 0.00 0.00 0.00 4.85
701 1181 2.527624 TGGCACACCTCTGAGGCT 60.528 61.111 23.43 8.20 39.63 4.58
702 1182 2.267324 GGCACACCTCTGAGGCTC 59.733 66.667 23.43 7.79 39.63 4.70
703 1183 2.289532 GGCACACCTCTGAGGCTCT 61.290 63.158 23.43 1.15 39.63 4.09
704 1184 1.079266 GCACACCTCTGAGGCTCTG 60.079 63.158 23.43 16.23 39.63 3.35
705 1185 1.825281 GCACACCTCTGAGGCTCTGT 61.825 60.000 23.43 16.87 39.63 3.41
715 1195 3.005539 GGCTCTGTGAGGGCTCCA 61.006 66.667 0.00 0.00 0.00 3.86
718 1198 2.997315 TCTGTGAGGGCTCCACCG 60.997 66.667 3.17 0.00 40.62 4.94
753 1237 1.072173 TGTCTGACATGTGGGTCCAAG 59.928 52.381 1.15 0.00 36.97 3.61
754 1238 0.036732 TCTGACATGTGGGTCCAAGC 59.963 55.000 1.15 0.00 36.97 4.01
755 1239 0.250858 CTGACATGTGGGTCCAAGCA 60.251 55.000 1.15 0.00 36.97 3.91
756 1240 0.405198 TGACATGTGGGTCCAAGCAT 59.595 50.000 1.15 0.00 36.97 3.79
757 1241 1.098050 GACATGTGGGTCCAAGCATC 58.902 55.000 1.15 0.00 0.00 3.91
758 1242 0.323725 ACATGTGGGTCCAAGCATCC 60.324 55.000 0.00 0.00 0.00 3.51
759 1243 1.077501 ATGTGGGTCCAAGCATCCG 60.078 57.895 0.00 0.00 0.00 4.18
760 1244 3.134127 GTGGGTCCAAGCATCCGC 61.134 66.667 0.00 0.00 38.99 5.54
761 1245 3.645660 TGGGTCCAAGCATCCGCA 61.646 61.111 0.00 0.00 42.27 5.69
762 1246 3.134127 GGGTCCAAGCATCCGCAC 61.134 66.667 0.00 0.00 42.27 5.34
763 1247 3.134127 GGTCCAAGCATCCGCACC 61.134 66.667 0.00 0.00 42.27 5.01
764 1248 2.359850 GTCCAAGCATCCGCACCA 60.360 61.111 0.00 0.00 42.27 4.17
765 1249 1.971167 GTCCAAGCATCCGCACCAA 60.971 57.895 0.00 0.00 42.27 3.67
766 1250 1.971167 TCCAAGCATCCGCACCAAC 60.971 57.895 0.00 0.00 42.27 3.77
791 1275 3.276091 CCTCCGCAACAACACGCA 61.276 61.111 0.00 0.00 0.00 5.24
873 1357 0.250597 GGGACAACTACGTGCCCTTT 60.251 55.000 0.00 0.00 41.29 3.11
874 1358 1.154197 GGACAACTACGTGCCCTTTC 58.846 55.000 0.00 0.00 0.00 2.62
876 1360 2.490991 GACAACTACGTGCCCTTTCTT 58.509 47.619 0.00 0.00 0.00 2.52
879 1363 2.165319 ACTACGTGCCCTTTCTTGTC 57.835 50.000 0.00 0.00 0.00 3.18
886 1376 2.746277 CCTTTCTTGTCCCGCCGG 60.746 66.667 0.00 0.00 0.00 6.13
921 1412 4.126524 CGCTCCTTTTCGGATCCC 57.873 61.111 6.06 0.00 42.12 3.85
1033 1542 2.772924 CAAATGGCCTCACCCCCT 59.227 61.111 3.32 0.00 37.83 4.79
1198 1707 2.047465 AAGACGAGGCTGCAGCTG 60.047 61.111 35.82 26.83 41.70 4.24
1480 1989 3.518705 AGGTCAGATTGCACATCTCTCTT 59.481 43.478 8.01 1.10 0.00 2.85
1481 1990 3.870419 GGTCAGATTGCACATCTCTCTTC 59.130 47.826 8.01 0.73 0.00 2.87
1482 1991 3.870419 GTCAGATTGCACATCTCTCTTCC 59.130 47.826 8.01 0.00 0.00 3.46
1596 2105 3.230355 TGTGTTCGCATTTTGTATTCGC 58.770 40.909 0.00 0.00 0.00 4.70
1619 2128 6.090088 CGCATATAATTTGGACAGCTCTAGAC 59.910 42.308 0.00 0.00 0.00 2.59
1647 2156 4.636206 CCTTGCTGGGATCTTAAAGTGTAC 59.364 45.833 0.00 0.00 0.00 2.90
1654 2163 7.226918 GCTGGGATCTTAAAGTGTACTTTATCC 59.773 40.741 19.94 19.94 44.88 2.59
1674 2183 4.793071 TCCATGTAAAAGTTGCATCGTTG 58.207 39.130 0.00 0.00 33.54 4.10
1712 2232 3.467803 CGAAGACATAAACCAGATCCCC 58.532 50.000 0.00 0.00 0.00 4.81
1726 2246 3.686726 CAGATCCCCGCAGCTATTTAATC 59.313 47.826 0.00 0.00 0.00 1.75
1750 2270 1.202817 TGTGTGCATGATGTTGATGCC 59.797 47.619 0.00 0.00 44.76 4.40
1768 2288 1.202818 GCCTTTCTGACAACCTGTCCT 60.203 52.381 4.42 0.00 46.40 3.85
1821 2341 0.883833 GGTCCAATTGTGGTCTGCTG 59.116 55.000 4.43 0.00 46.11 4.41
1874 2394 2.898612 GTCTACCTACCCTGCCCTATTC 59.101 54.545 0.00 0.00 0.00 1.75
1875 2395 2.520980 TCTACCTACCCTGCCCTATTCA 59.479 50.000 0.00 0.00 0.00 2.57
1888 2408 4.467082 TGCCCTATTCAAATGCTGTCAAAT 59.533 37.500 0.00 0.00 0.00 2.32
1890 2410 6.154192 TGCCCTATTCAAATGCTGTCAAATAA 59.846 34.615 0.00 0.00 0.00 1.40
1891 2411 7.147689 TGCCCTATTCAAATGCTGTCAAATAAT 60.148 33.333 0.00 0.00 0.00 1.28
1892 2412 8.359642 GCCCTATTCAAATGCTGTCAAATAATA 58.640 33.333 0.00 0.00 0.00 0.98
1920 2440 1.079543 CAGAAGCACCTGGACCTCG 60.080 63.158 0.00 0.00 0.00 4.63
1936 2456 2.232941 ACCTCGTGTTAATGATGTCCGT 59.767 45.455 0.00 0.00 0.00 4.69
1937 2457 2.603110 CCTCGTGTTAATGATGTCCGTG 59.397 50.000 0.00 0.00 0.00 4.94
1938 2458 3.250744 CTCGTGTTAATGATGTCCGTGT 58.749 45.455 0.00 0.00 0.00 4.49
1939 2459 3.655486 TCGTGTTAATGATGTCCGTGTT 58.345 40.909 0.00 0.00 0.00 3.32
1941 2461 4.860352 TCGTGTTAATGATGTCCGTGTTAG 59.140 41.667 0.00 0.00 0.00 2.34
1942 2462 4.491924 CGTGTTAATGATGTCCGTGTTAGC 60.492 45.833 0.00 0.00 0.00 3.09
1944 2464 5.064707 GTGTTAATGATGTCCGTGTTAGCAT 59.935 40.000 0.00 0.00 0.00 3.79
1945 2465 5.293324 TGTTAATGATGTCCGTGTTAGCATC 59.707 40.000 0.00 0.00 38.45 3.91
1946 2466 2.309528 TGATGTCCGTGTTAGCATCC 57.690 50.000 0.00 0.00 37.51 3.51
1947 2467 1.209128 GATGTCCGTGTTAGCATCCG 58.791 55.000 0.00 0.00 33.59 4.18
1948 2468 0.179084 ATGTCCGTGTTAGCATCCGG 60.179 55.000 0.00 0.00 41.75 5.14
1949 2469 2.171725 GTCCGTGTTAGCATCCGGC 61.172 63.158 0.00 0.00 45.30 6.13
1958 2478 3.161450 GCATCCGGCTCCCCACTA 61.161 66.667 0.00 0.00 40.25 2.74
1959 2479 3.142393 CATCCGGCTCCCCACTAG 58.858 66.667 0.00 0.00 0.00 2.57
1962 2482 0.104934 ATCCGGCTCCCCACTAGAAT 60.105 55.000 0.00 0.00 0.00 2.40
1963 2483 1.048724 TCCGGCTCCCCACTAGAATG 61.049 60.000 0.00 0.00 0.00 2.67
1964 2484 1.227674 CGGCTCCCCACTAGAATGC 60.228 63.158 0.00 0.00 0.00 3.56
1968 2554 2.027653 GGCTCCCCACTAGAATGCTATC 60.028 54.545 0.00 0.00 0.00 2.08
1991 2577 3.224955 GCATTTGACCGAGAATGCG 57.775 52.632 5.44 0.00 45.75 4.73
2004 2592 1.071699 AGAATGCGGTGTAGTTGTGGT 59.928 47.619 0.00 0.00 0.00 4.16
2024 2612 6.436218 TGTGGTATCTTTAGTCTCAGCTGTTA 59.564 38.462 14.67 0.00 0.00 2.41
2063 2651 1.134946 CCACCGGCCTTGATTTCATTC 59.865 52.381 0.00 0.00 0.00 2.67
2064 2652 2.094675 CACCGGCCTTGATTTCATTCT 58.905 47.619 0.00 0.00 0.00 2.40
2065 2653 2.094675 ACCGGCCTTGATTTCATTCTG 58.905 47.619 0.00 0.00 0.00 3.02
2066 2654 2.290896 ACCGGCCTTGATTTCATTCTGA 60.291 45.455 0.00 0.00 0.00 3.27
2067 2655 2.754552 CCGGCCTTGATTTCATTCTGAA 59.245 45.455 0.00 0.00 34.03 3.02
2084 2672 4.943142 CTGAAATCAGAGAAGGCTGTTC 57.057 45.455 4.37 0.00 46.59 3.18
2085 2673 4.577875 CTGAAATCAGAGAAGGCTGTTCT 58.422 43.478 4.37 1.98 46.59 3.01
2086 2674 4.978099 TGAAATCAGAGAAGGCTGTTCTT 58.022 39.130 3.77 0.00 37.20 2.52
2087 2675 5.380043 TGAAATCAGAGAAGGCTGTTCTTT 58.620 37.500 3.77 0.00 37.20 2.52
2088 2676 5.829924 TGAAATCAGAGAAGGCTGTTCTTTT 59.170 36.000 3.77 0.00 37.20 2.27
2089 2677 5.956068 AATCAGAGAAGGCTGTTCTTTTC 57.044 39.130 3.77 0.00 37.20 2.29
2090 2678 4.696479 TCAGAGAAGGCTGTTCTTTTCT 57.304 40.909 3.77 0.00 38.31 2.52
2091 2679 4.745837 CAGAGAAGGCTGTTCTTTTCTG 57.254 45.455 14.00 14.00 44.12 3.02
2092 2680 4.696479 AGAGAAGGCTGTTCTTTTCTGA 57.304 40.909 3.77 0.00 37.00 3.27
2093 2681 5.240013 AGAGAAGGCTGTTCTTTTCTGAT 57.760 39.130 3.77 0.00 37.00 2.90
2094 2682 6.365970 AGAGAAGGCTGTTCTTTTCTGATA 57.634 37.500 3.77 0.00 37.00 2.15
2095 2683 6.405538 AGAGAAGGCTGTTCTTTTCTGATAG 58.594 40.000 3.77 0.00 37.00 2.08
2096 2684 6.212388 AGAGAAGGCTGTTCTTTTCTGATAGA 59.788 38.462 3.77 0.00 37.00 1.98
2097 2685 6.956497 AGAAGGCTGTTCTTTTCTGATAGAT 58.044 36.000 0.00 0.00 0.00 1.98
2098 2686 6.822676 AGAAGGCTGTTCTTTTCTGATAGATG 59.177 38.462 0.00 0.00 0.00 2.90
2099 2687 5.435291 AGGCTGTTCTTTTCTGATAGATGG 58.565 41.667 0.00 0.00 0.00 3.51
2100 2688 5.190528 AGGCTGTTCTTTTCTGATAGATGGA 59.809 40.000 0.00 0.00 0.00 3.41
2101 2689 5.526846 GGCTGTTCTTTTCTGATAGATGGAG 59.473 44.000 0.00 0.00 0.00 3.86
2102 2690 5.007528 GCTGTTCTTTTCTGATAGATGGAGC 59.992 44.000 0.00 0.00 0.00 4.70
2103 2691 5.431765 TGTTCTTTTCTGATAGATGGAGCC 58.568 41.667 0.00 0.00 0.00 4.70
2104 2692 4.696479 TCTTTTCTGATAGATGGAGCCC 57.304 45.455 0.00 0.00 0.00 5.19
2105 2693 4.040047 TCTTTTCTGATAGATGGAGCCCA 58.960 43.478 0.00 0.00 38.19 5.36
2106 2694 3.845781 TTTCTGATAGATGGAGCCCAC 57.154 47.619 0.00 0.00 35.80 4.61
2107 2695 1.722034 TCTGATAGATGGAGCCCACC 58.278 55.000 0.00 0.00 35.80 4.61
2108 2696 0.319728 CTGATAGATGGAGCCCACCG 59.680 60.000 0.00 0.00 35.80 4.94
2109 2697 1.121407 TGATAGATGGAGCCCACCGG 61.121 60.000 0.00 0.00 35.80 5.28
2119 2707 3.603365 CCCACCGGCCTTGATTTC 58.397 61.111 0.00 0.00 0.00 2.17
2120 2708 1.304052 CCCACCGGCCTTGATTTCA 60.304 57.895 0.00 0.00 0.00 2.69
2145 2733 9.327628 CATTCAGAAATCAGAGAAGTATCACAT 57.672 33.333 0.00 0.00 0.00 3.21
2146 2734 9.902684 ATTCAGAAATCAGAGAAGTATCACATT 57.097 29.630 0.00 0.00 0.00 2.71
2147 2735 8.939201 TCAGAAATCAGAGAAGTATCACATTC 57.061 34.615 0.00 0.00 0.00 2.67
2148 2736 8.534496 TCAGAAATCAGAGAAGTATCACATTCA 58.466 33.333 0.00 0.00 0.00 2.57
2149 2737 8.602328 CAGAAATCAGAGAAGTATCACATTCAC 58.398 37.037 0.00 0.00 0.00 3.18
2150 2738 8.316946 AGAAATCAGAGAAGTATCACATTCACA 58.683 33.333 0.00 0.00 0.00 3.58
2171 2759 1.302832 CACTCCACCCAGAACCAGC 60.303 63.158 0.00 0.00 0.00 4.85
2194 2782 2.871096 GGATACAAACCACCCAGACA 57.129 50.000 0.00 0.00 0.00 3.41
2205 2793 0.820891 ACCCAGACACTGCAAAGCTG 60.821 55.000 0.00 0.00 0.00 4.24
2209 2797 2.099592 CCAGACACTGCAAAGCTGAAAA 59.900 45.455 2.86 0.00 0.00 2.29
2213 2802 4.640201 AGACACTGCAAAGCTGAAAAACTA 59.360 37.500 2.86 0.00 0.00 2.24
2216 2805 4.500477 CACTGCAAAGCTGAAAAACTACAC 59.500 41.667 2.86 0.00 0.00 2.90
2224 2813 4.515567 AGCTGAAAAACTACACCTACAAGC 59.484 41.667 0.00 0.00 0.00 4.01
2228 2817 7.486802 TGAAAAACTACACCTACAAGCTAAC 57.513 36.000 0.00 0.00 0.00 2.34
2229 2818 7.277396 TGAAAAACTACACCTACAAGCTAACT 58.723 34.615 0.00 0.00 0.00 2.24
2231 2820 6.415206 AAACTACACCTACAAGCTAACTCA 57.585 37.500 0.00 0.00 0.00 3.41
2232 2821 6.415206 AACTACACCTACAAGCTAACTCAA 57.585 37.500 0.00 0.00 0.00 3.02
2235 2824 6.704937 ACTACACCTACAAGCTAACTCAAAAC 59.295 38.462 0.00 0.00 0.00 2.43
2237 2826 5.527582 ACACCTACAAGCTAACTCAAAACAG 59.472 40.000 0.00 0.00 0.00 3.16
2238 2827 4.515567 ACCTACAAGCTAACTCAAAACAGC 59.484 41.667 0.00 0.00 0.00 4.40
2240 2829 5.182001 CCTACAAGCTAACTCAAAACAGCAT 59.818 40.000 0.00 0.00 36.47 3.79
2241 2830 5.520376 ACAAGCTAACTCAAAACAGCATT 57.480 34.783 0.00 0.00 36.47 3.56
2242 2831 5.523369 ACAAGCTAACTCAAAACAGCATTC 58.477 37.500 0.00 0.00 36.47 2.67
2243 2832 5.067674 ACAAGCTAACTCAAAACAGCATTCA 59.932 36.000 0.00 0.00 36.47 2.57
2244 2833 5.368256 AGCTAACTCAAAACAGCATTCAG 57.632 39.130 0.00 0.00 36.47 3.02
2245 2834 4.217118 AGCTAACTCAAAACAGCATTCAGG 59.783 41.667 0.00 0.00 36.47 3.86
2246 2835 4.216257 GCTAACTCAAAACAGCATTCAGGA 59.784 41.667 0.00 0.00 34.13 3.86
2247 2836 5.105997 GCTAACTCAAAACAGCATTCAGGAT 60.106 40.000 0.00 0.00 34.13 3.24
2279 2869 6.443792 AGAAACAAAAGACAAAACGAGTTGT 58.556 32.000 7.96 7.96 44.38 3.32
2311 2904 5.482908 TCAAAAGCTAGACAGAAGATCCAC 58.517 41.667 0.00 0.00 0.00 4.02
2329 2922 0.185901 ACAACAGGCACCAATGGACT 59.814 50.000 6.16 0.00 0.00 3.85
2345 2938 1.481363 GGACTCGAGGAAGTAAAGGGG 59.519 57.143 18.41 0.00 0.00 4.79
2346 2939 2.454538 GACTCGAGGAAGTAAAGGGGA 58.545 52.381 18.41 0.00 0.00 4.81
2348 2941 2.176889 CTCGAGGAAGTAAAGGGGACA 58.823 52.381 3.91 0.00 0.00 4.02
2351 2944 2.038033 CGAGGAAGTAAAGGGGACAACA 59.962 50.000 0.00 0.00 0.00 3.33
2375 2968 6.286240 ACTACATTGTTAGTCTCATGCTGA 57.714 37.500 0.00 0.00 0.00 4.26
2378 2971 8.478066 ACTACATTGTTAGTCTCATGCTGATAA 58.522 33.333 0.00 0.00 0.00 1.75
2379 2972 9.486497 CTACATTGTTAGTCTCATGCTGATAAT 57.514 33.333 0.00 0.00 0.00 1.28
2406 2999 1.458398 CCATGGCAACGTCCATACAA 58.542 50.000 8.35 0.00 44.63 2.41
2414 3007 0.973632 ACGTCCATACAACTCCTGCA 59.026 50.000 0.00 0.00 0.00 4.41
2418 3011 1.003118 TCCATACAACTCCTGCACCAC 59.997 52.381 0.00 0.00 0.00 4.16
2451 3044 1.678970 GGGATCCCTGCCACAACAC 60.679 63.158 24.69 0.00 31.98 3.32
2453 3046 1.380302 GATCCCTGCCACAACACCT 59.620 57.895 0.00 0.00 0.00 4.00
2454 3047 0.251341 GATCCCTGCCACAACACCTT 60.251 55.000 0.00 0.00 0.00 3.50
2455 3048 0.251341 ATCCCTGCCACAACACCTTC 60.251 55.000 0.00 0.00 0.00 3.46
2456 3049 2.260869 CCCTGCCACAACACCTTCG 61.261 63.158 0.00 0.00 0.00 3.79
2457 3050 1.227823 CCTGCCACAACACCTTCGA 60.228 57.895 0.00 0.00 0.00 3.71
2458 3051 0.817634 CCTGCCACAACACCTTCGAA 60.818 55.000 0.00 0.00 0.00 3.71
2459 3052 0.588252 CTGCCACAACACCTTCGAAG 59.412 55.000 18.51 18.51 0.00 3.79
2460 3053 0.179234 TGCCACAACACCTTCGAAGA 59.821 50.000 26.61 0.00 0.00 2.87
2461 3054 0.868406 GCCACAACACCTTCGAAGAG 59.132 55.000 26.61 19.31 38.43 2.85
2468 3061 1.141053 ACACCTTCGAAGAGCACCTTT 59.859 47.619 26.61 0.00 38.43 3.11
2605 3199 1.561076 AGATAGCAGCCACACCAATCA 59.439 47.619 0.00 0.00 0.00 2.57
2613 3207 4.142093 GCAGCCACACCAATCATAAGAAAT 60.142 41.667 0.00 0.00 0.00 2.17
2629 3223 9.224267 TCATAAGAAATTTTCTGTCTCTTCCTG 57.776 33.333 12.27 1.71 40.59 3.86
2649 3243 3.971150 TGCAGAAACATTAAACCAACCG 58.029 40.909 0.00 0.00 0.00 4.44
2700 3294 1.227823 TTTCACTCCCAGCACCACG 60.228 57.895 0.00 0.00 0.00 4.94
2913 3507 3.990959 ATTGGTTCTGAGGTTCCTCTC 57.009 47.619 18.07 7.55 34.42 3.20
2991 3585 7.999450 ATACTCTTAATTAGTACTCCCTCCG 57.001 40.000 0.00 0.00 32.47 4.63
2992 3586 5.764432 ACTCTTAATTAGTACTCCCTCCGT 58.236 41.667 0.00 0.00 0.00 4.69
2993 3587 5.827267 ACTCTTAATTAGTACTCCCTCCGTC 59.173 44.000 0.00 0.00 0.00 4.79
2994 3588 5.136105 TCTTAATTAGTACTCCCTCCGTCC 58.864 45.833 0.00 0.00 0.00 4.79
2995 3589 2.378378 ATTAGTACTCCCTCCGTCCC 57.622 55.000 0.00 0.00 0.00 4.46
2996 3590 1.002069 TTAGTACTCCCTCCGTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
2997 3591 1.229131 TAGTACTCCCTCCGTCCCAT 58.771 55.000 0.00 0.00 0.00 4.00
2998 3592 1.229131 AGTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
2999 3593 1.572415 AGTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
3000 3594 2.179424 AGTACTCCCTCCGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
3001 3595 3.400322 AGTACTCCCTCCGTCCCATAATA 59.600 47.826 0.00 0.00 0.00 0.98
3002 3596 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
3003 3597 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
3004 3598 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
3005 3599 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
3006 3600 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
3007 3601 5.269991 TCCCTCCGTCCCATAATATAAGAG 58.730 45.833 0.00 0.00 0.00 2.85
3008 3602 4.141914 CCCTCCGTCCCATAATATAAGAGC 60.142 50.000 0.00 0.00 0.00 4.09
3009 3603 4.440250 CCTCCGTCCCATAATATAAGAGCG 60.440 50.000 0.00 0.00 0.00 5.03
3010 3604 4.084287 TCCGTCCCATAATATAAGAGCGT 58.916 43.478 0.00 0.00 0.00 5.07
3011 3605 4.525487 TCCGTCCCATAATATAAGAGCGTT 59.475 41.667 0.00 0.00 0.00 4.84
3012 3606 5.011329 TCCGTCCCATAATATAAGAGCGTTT 59.989 40.000 0.00 0.00 0.00 3.60
3013 3607 5.699458 CCGTCCCATAATATAAGAGCGTTTT 59.301 40.000 0.00 0.00 0.00 2.43
3014 3608 6.204108 CCGTCCCATAATATAAGAGCGTTTTT 59.796 38.462 0.00 0.00 0.00 1.94
3015 3609 7.069569 CGTCCCATAATATAAGAGCGTTTTTG 58.930 38.462 0.00 0.00 0.00 2.44
3016 3610 7.042321 CGTCCCATAATATAAGAGCGTTTTTGA 60.042 37.037 0.00 0.00 0.00 2.69
3017 3611 8.068380 GTCCCATAATATAAGAGCGTTTTTGAC 58.932 37.037 0.00 0.00 0.00 3.18
3018 3612 7.771361 TCCCATAATATAAGAGCGTTTTTGACA 59.229 33.333 0.00 0.00 0.00 3.58
3019 3613 7.855904 CCCATAATATAAGAGCGTTTTTGACAC 59.144 37.037 0.00 0.00 0.00 3.67
3020 3614 8.612619 CCATAATATAAGAGCGTTTTTGACACT 58.387 33.333 0.00 0.00 0.00 3.55
3021 3615 9.425893 CATAATATAAGAGCGTTTTTGACACTG 57.574 33.333 0.00 0.00 0.00 3.66
3022 3616 4.749245 ATAAGAGCGTTTTTGACACTGG 57.251 40.909 0.00 0.00 0.00 4.00
3023 3617 1.308998 AGAGCGTTTTTGACACTGGG 58.691 50.000 0.00 0.00 0.00 4.45
3024 3618 1.134220 AGAGCGTTTTTGACACTGGGA 60.134 47.619 0.00 0.00 0.00 4.37
3025 3619 1.002792 GAGCGTTTTTGACACTGGGAC 60.003 52.381 0.00 0.00 0.00 4.46
3026 3620 0.316689 GCGTTTTTGACACTGGGACG 60.317 55.000 0.00 0.00 0.00 4.79
3027 3621 0.306533 CGTTTTTGACACTGGGACGG 59.693 55.000 0.00 0.00 42.99 4.79
3028 3622 1.670791 GTTTTTGACACTGGGACGGA 58.329 50.000 0.00 0.00 38.67 4.69
3029 3623 1.602377 GTTTTTGACACTGGGACGGAG 59.398 52.381 0.00 0.00 38.67 4.63
3030 3624 0.107831 TTTTGACACTGGGACGGAGG 59.892 55.000 0.00 0.00 38.67 4.30
3031 3625 1.764571 TTTGACACTGGGACGGAGGG 61.765 60.000 0.00 0.00 38.67 4.30
3032 3626 2.283676 GACACTGGGACGGAGGGA 60.284 66.667 0.00 0.00 38.67 4.20
3033 3627 2.283966 ACACTGGGACGGAGGGAG 60.284 66.667 0.00 0.00 38.67 4.30
3034 3628 2.037367 CACTGGGACGGAGGGAGA 59.963 66.667 0.00 0.00 38.67 3.71
3035 3629 2.055042 CACTGGGACGGAGGGAGAG 61.055 68.421 0.00 0.00 38.67 3.20
3036 3630 2.360980 CTGGGACGGAGGGAGAGT 59.639 66.667 0.00 0.00 36.31 3.24
3037 3631 2.037367 TGGGACGGAGGGAGAGTG 59.963 66.667 0.00 0.00 0.00 3.51
3038 3632 2.037527 GGGACGGAGGGAGAGTGT 59.962 66.667 0.00 0.00 0.00 3.55
3039 3633 1.305623 GGGACGGAGGGAGAGTGTA 59.694 63.158 0.00 0.00 0.00 2.90
3040 3634 0.324091 GGGACGGAGGGAGAGTGTAA 60.324 60.000 0.00 0.00 0.00 2.41
3041 3635 1.553706 GGACGGAGGGAGAGTGTAAA 58.446 55.000 0.00 0.00 0.00 2.01
3042 3636 1.897802 GGACGGAGGGAGAGTGTAAAA 59.102 52.381 0.00 0.00 0.00 1.52
3043 3637 2.301009 GGACGGAGGGAGAGTGTAAAAA 59.699 50.000 0.00 0.00 0.00 1.94
3064 3658 6.780706 AAAACGCTCTTATATTATGGGACG 57.219 37.500 0.00 0.00 0.00 4.79
3065 3659 4.451629 ACGCTCTTATATTATGGGACGG 57.548 45.455 0.00 0.00 0.00 4.79
3066 3660 4.084287 ACGCTCTTATATTATGGGACGGA 58.916 43.478 0.00 0.00 0.00 4.69
3067 3661 4.158025 ACGCTCTTATATTATGGGACGGAG 59.842 45.833 0.00 0.00 0.00 4.63
3068 3662 4.440250 CGCTCTTATATTATGGGACGGAGG 60.440 50.000 0.00 0.00 0.00 4.30
3069 3663 4.141914 GCTCTTATATTATGGGACGGAGGG 60.142 50.000 0.00 0.00 0.00 4.30
3242 3838 7.278646 GTGTTCTATAGTTGAATCATCAGTGCA 59.721 37.037 0.00 0.00 36.78 4.57
3243 3839 7.823799 TGTTCTATAGTTGAATCATCAGTGCAA 59.176 33.333 0.00 0.00 36.78 4.08
3244 3840 8.834465 GTTCTATAGTTGAATCATCAGTGCAAT 58.166 33.333 0.00 0.00 36.78 3.56
3309 3905 4.141551 ACCTCCGTCCCAAAATATAAGACC 60.142 45.833 0.00 0.00 0.00 3.85
3360 3956 9.503399 AAAAACGTCTTATATTCTGAAAGGTCT 57.497 29.630 0.00 0.00 0.00 3.85
3361 3957 9.503399 AAAACGTCTTATATTCTGAAAGGTCTT 57.497 29.630 0.00 0.00 0.00 3.01
3428 4120 6.822170 ACGGAGGGAGTATTAATTTTGACTTC 59.178 38.462 0.00 0.00 0.00 3.01
3453 4145 5.874810 TGTTGCTGTACCTTCTCATATTCAC 59.125 40.000 0.00 0.00 0.00 3.18
3494 4186 7.877612 TGTACATTCTGTCACTGTGATTATGTT 59.122 33.333 22.64 13.71 0.00 2.71
3505 4200 8.845227 TCACTGTGATTATGTTTTTCAAGCTTA 58.155 29.630 6.36 0.00 0.00 3.09
3694 4389 0.179181 CATCACCAACTGTCATGCGC 60.179 55.000 0.00 0.00 0.00 6.09
3700 4395 3.254014 AACTGTCATGCGCAACGGC 62.254 57.895 17.11 11.55 0.00 5.68
3745 4440 3.553511 CAGCCAAGAACACGATAGACATC 59.446 47.826 0.00 0.00 41.38 3.06
3775 4470 1.452108 GAAGCATGAAGGGGACGGG 60.452 63.158 0.00 0.00 0.00 5.28
3808 4503 3.403624 TGGCAGTCCATGGTCTCC 58.596 61.111 12.58 14.48 37.47 3.71
3922 4617 2.200373 AGTACAAGGGCATGTTCCAC 57.800 50.000 9.35 0.00 34.75 4.02
3970 4665 4.101448 CTCCGGGCCCTGTGGAAG 62.101 72.222 22.43 9.40 0.00 3.46
4006 4701 0.548031 TGATGAGGATTCCACCTGGC 59.452 55.000 5.29 0.00 40.73 4.85
4051 4746 2.264455 GATCAGGTGATGGGCCTCTAT 58.736 52.381 4.53 0.00 34.37 1.98
4073 4768 1.135139 AGCGAACATATCTGCAGTCGT 59.865 47.619 19.34 8.60 32.38 4.34
4133 4882 3.944422 CCGAATTGATTGGTTAGTCGG 57.056 47.619 0.00 0.00 40.40 4.79
4135 4884 2.285602 CGAATTGATTGGTTAGTCGGCG 60.286 50.000 0.00 0.00 0.00 6.46
4234 4983 4.081309 GCCCATGTACTTTAGTAGTCCACA 60.081 45.833 0.00 0.00 38.33 4.17
4274 5023 6.383726 CCCCCTTCCAATTTTGATAAGAATGA 59.616 38.462 6.83 0.00 0.00 2.57
4277 5026 7.864379 CCCTTCCAATTTTGATAAGAATGATCG 59.136 37.037 6.83 0.00 0.00 3.69
4285 5034 8.907222 TTTTGATAAGAATGATCGGATGATGA 57.093 30.769 0.00 0.00 34.09 2.92
4308 5057 6.763135 TGACTGACTGTTATGGATAAGAATGC 59.237 38.462 0.00 0.00 0.00 3.56
4328 5077 4.752146 TGCTCTGATGACTGACTGTTATG 58.248 43.478 0.00 0.00 0.00 1.90
4329 5078 4.118410 GCTCTGATGACTGACTGTTATGG 58.882 47.826 0.00 0.00 0.00 2.74
4330 5079 4.142071 GCTCTGATGACTGACTGTTATGGA 60.142 45.833 0.00 0.00 0.00 3.41
4331 5080 5.453057 GCTCTGATGACTGACTGTTATGGAT 60.453 44.000 0.00 0.00 0.00 3.41
4336 5085 5.077134 TGACTGACTGTTATGGATGTGAG 57.923 43.478 0.00 0.00 0.00 3.51
4344 5093 5.356190 ACTGTTATGGATGTGAGCTTGAATG 59.644 40.000 0.00 0.00 0.00 2.67
4351 5100 2.079158 TGTGAGCTTGAATGCTAGCAC 58.921 47.619 22.07 9.17 43.90 4.40
4352 5101 1.399791 GTGAGCTTGAATGCTAGCACC 59.600 52.381 22.07 15.47 43.90 5.01
4379 5128 3.199727 TGCTTACTGGGCTGATGATGTTA 59.800 43.478 0.00 0.00 0.00 2.41
4408 5157 0.033796 CCATGGGCCAGTTGTGAGAT 60.034 55.000 13.78 0.00 0.00 2.75
4414 5163 0.376152 GCCAGTTGTGAGATGCGATG 59.624 55.000 0.00 0.00 0.00 3.84
4416 5165 2.558378 CCAGTTGTGAGATGCGATGAT 58.442 47.619 0.00 0.00 0.00 2.45
4461 5210 3.627690 CTGGACTCTCCCTCCAGC 58.372 66.667 1.57 0.00 46.53 4.85
4498 5247 3.187414 GCTGTCGCTCTCTGCAGC 61.187 66.667 9.47 0.00 45.70 5.25
4511 5260 3.194719 GCAGCCTGCATCTCCAAC 58.805 61.111 12.82 0.00 44.26 3.77
4512 5261 2.413142 GCAGCCTGCATCTCCAACC 61.413 63.158 12.82 0.00 44.26 3.77
4513 5262 1.751927 CAGCCTGCATCTCCAACCC 60.752 63.158 0.00 0.00 0.00 4.11
4514 5263 2.440980 GCCTGCATCTCCAACCCC 60.441 66.667 0.00 0.00 0.00 4.95
4515 5264 2.988839 GCCTGCATCTCCAACCCCT 61.989 63.158 0.00 0.00 0.00 4.79
4516 5265 1.635817 GCCTGCATCTCCAACCCCTA 61.636 60.000 0.00 0.00 0.00 3.53
4517 5266 0.918983 CCTGCATCTCCAACCCCTAA 59.081 55.000 0.00 0.00 0.00 2.69
4518 5267 1.284785 CCTGCATCTCCAACCCCTAAA 59.715 52.381 0.00 0.00 0.00 1.85
4519 5268 2.291540 CCTGCATCTCCAACCCCTAAAA 60.292 50.000 0.00 0.00 0.00 1.52
4520 5269 3.430453 CTGCATCTCCAACCCCTAAAAA 58.570 45.455 0.00 0.00 0.00 1.94
4541 5290 6.446781 AAAAATGTAGTCTGCATCTCCATG 57.553 37.500 3.71 0.00 0.00 3.66
4553 5302 1.971481 TCTCCATGATTGGCGATTGG 58.029 50.000 0.00 0.00 43.29 3.16
4563 5312 1.250154 TGGCGATTGGCTTTTGGGAG 61.250 55.000 8.17 0.00 42.94 4.30
4564 5313 1.153765 GCGATTGGCTTTTGGGAGC 60.154 57.895 0.00 0.00 41.96 4.70
4572 5321 0.179137 GCTTTTGGGAGCCATAACGC 60.179 55.000 0.00 0.00 36.66 4.84
4573 5322 1.173043 CTTTTGGGAGCCATAACGCA 58.827 50.000 0.00 0.00 31.53 5.24
4574 5323 1.133025 CTTTTGGGAGCCATAACGCAG 59.867 52.381 0.00 0.00 31.53 5.18
4575 5324 0.679640 TTTGGGAGCCATAACGCAGG 60.680 55.000 0.00 0.00 31.53 4.85
4580 5329 2.438434 GCCATAACGCAGGCCACT 60.438 61.111 5.01 0.00 45.18 4.00
4581 5330 2.764314 GCCATAACGCAGGCCACTG 61.764 63.158 5.01 0.00 45.18 3.66
4599 5348 3.378112 CACTGGCTTCAACTTTCACTCAA 59.622 43.478 0.00 0.00 0.00 3.02
4636 5857 4.623932 ACAGTAGATTCAGCAACCTCAA 57.376 40.909 0.00 0.00 0.00 3.02
4637 5858 5.171339 ACAGTAGATTCAGCAACCTCAAT 57.829 39.130 0.00 0.00 0.00 2.57
4638 5859 5.181748 ACAGTAGATTCAGCAACCTCAATC 58.818 41.667 0.00 0.00 0.00 2.67
4639 5860 4.574013 CAGTAGATTCAGCAACCTCAATCC 59.426 45.833 0.00 0.00 0.00 3.01
4640 5861 3.726557 AGATTCAGCAACCTCAATCCA 57.273 42.857 0.00 0.00 0.00 3.41
4641 5862 4.038271 AGATTCAGCAACCTCAATCCAA 57.962 40.909 0.00 0.00 0.00 3.53
4642 5863 3.760684 AGATTCAGCAACCTCAATCCAAC 59.239 43.478 0.00 0.00 0.00 3.77
4643 5864 2.957402 TCAGCAACCTCAATCCAACT 57.043 45.000 0.00 0.00 0.00 3.16
4644 5865 2.507484 TCAGCAACCTCAATCCAACTG 58.493 47.619 0.00 0.00 0.00 3.16
4645 5866 2.158623 TCAGCAACCTCAATCCAACTGT 60.159 45.455 0.00 0.00 0.00 3.55
4646 5867 3.072330 TCAGCAACCTCAATCCAACTGTA 59.928 43.478 0.00 0.00 0.00 2.74
4647 5868 3.438087 CAGCAACCTCAATCCAACTGTAG 59.562 47.826 0.00 0.00 0.00 2.74
4648 5869 3.073062 AGCAACCTCAATCCAACTGTAGT 59.927 43.478 0.00 0.00 0.00 2.73
4649 5870 3.821033 GCAACCTCAATCCAACTGTAGTT 59.179 43.478 0.00 0.00 39.12 2.24
4650 5871 5.001232 GCAACCTCAATCCAACTGTAGTTA 58.999 41.667 0.00 0.00 36.32 2.24
4651 5872 5.106673 GCAACCTCAATCCAACTGTAGTTAC 60.107 44.000 0.00 0.00 36.32 2.50
4652 5873 5.161943 ACCTCAATCCAACTGTAGTTACC 57.838 43.478 0.00 0.00 36.32 2.85
4653 5874 4.181578 CCTCAATCCAACTGTAGTTACCG 58.818 47.826 0.00 0.00 36.32 4.02
4654 5875 3.592059 TCAATCCAACTGTAGTTACCGC 58.408 45.455 0.00 0.00 36.32 5.68
4655 5876 2.676342 CAATCCAACTGTAGTTACCGCC 59.324 50.000 0.00 0.00 36.32 6.13
4656 5877 0.244450 TCCAACTGTAGTTACCGCCG 59.756 55.000 0.00 0.00 36.32 6.46
4657 5878 1.356527 CCAACTGTAGTTACCGCCGC 61.357 60.000 0.00 0.00 36.32 6.53
4658 5879 0.668096 CAACTGTAGTTACCGCCGCA 60.668 55.000 0.00 0.00 36.32 5.69
4659 5880 0.248289 AACTGTAGTTACCGCCGCAT 59.752 50.000 0.00 0.00 36.32 4.73
4660 5881 0.459585 ACTGTAGTTACCGCCGCATG 60.460 55.000 0.00 0.00 0.00 4.06
4661 5882 1.151777 CTGTAGTTACCGCCGCATGG 61.152 60.000 0.00 0.00 38.77 3.66
4662 5883 1.142314 GTAGTTACCGCCGCATGGA 59.858 57.895 0.00 0.00 37.49 3.41
4663 5884 0.874607 GTAGTTACCGCCGCATGGAG 60.875 60.000 0.00 0.00 37.49 3.86
4664 5885 1.038681 TAGTTACCGCCGCATGGAGA 61.039 55.000 0.00 0.00 37.19 3.71
4678 5899 3.285484 CATGGAGATGGAGTTTCCTTGG 58.715 50.000 0.00 0.00 37.46 3.61
4683 5904 2.307098 AGATGGAGTTTCCTTGGGACAG 59.693 50.000 0.00 0.00 37.46 3.51
4684 5905 0.771127 TGGAGTTTCCTTGGGACAGG 59.229 55.000 0.00 0.00 37.46 4.00
4762 5983 1.604278 GATCACCGGGCTTTTAGCATC 59.396 52.381 6.32 0.00 44.75 3.91
4764 5985 3.420943 CCGGGCTTTTAGCATCGG 58.579 61.111 14.74 14.74 46.69 4.18
4790 6011 1.434622 CCCATCAGCTTGCGCACTAG 61.435 60.000 11.12 7.28 39.10 2.57
4791 6012 1.351012 CATCAGCTTGCGCACTAGC 59.649 57.895 23.38 23.38 43.91 3.42
4795 6016 2.781300 GCTTGCGCACTAGCTGAC 59.219 61.111 23.50 0.00 40.89 3.51
4796 6017 2.744768 GCTTGCGCACTAGCTGACC 61.745 63.158 23.50 0.00 40.89 4.02
4797 6018 1.079543 CTTGCGCACTAGCTGACCT 60.080 57.895 11.12 0.00 39.10 3.85
4798 6019 1.357258 CTTGCGCACTAGCTGACCTG 61.357 60.000 11.12 0.00 39.10 4.00
4799 6020 1.815817 TTGCGCACTAGCTGACCTGA 61.816 55.000 11.12 0.00 39.10 3.86
4810 6031 0.894141 CTGACCTGACCTGACCTGAG 59.106 60.000 0.00 0.00 0.00 3.35
4834 6055 1.529244 GAGGCATCCAATTCCGGGG 60.529 63.158 0.00 0.00 0.00 5.73
4835 6056 3.226537 GGCATCCAATTCCGGGGC 61.227 66.667 0.00 0.00 0.00 5.80
4836 6057 3.226537 GCATCCAATTCCGGGGCC 61.227 66.667 0.00 0.00 0.00 5.80
4887 6132 2.948315 GCATTCTCTTGTGAAGGGATCC 59.052 50.000 1.92 1.92 37.96 3.36
4904 6149 0.034896 TCCGGTTCTCCTTCTGTTGC 59.965 55.000 0.00 0.00 0.00 4.17
4914 6159 2.156917 CCTTCTGTTGCTGCAGATCAA 58.843 47.619 20.43 10.48 43.99 2.57
4919 6164 1.881973 TGTTGCTGCAGATCAAAGTCC 59.118 47.619 20.43 1.94 0.00 3.85
4920 6165 1.200948 GTTGCTGCAGATCAAAGTCCC 59.799 52.381 20.43 0.00 0.00 4.46
4922 6167 1.093159 GCTGCAGATCAAAGTCCCTG 58.907 55.000 20.43 0.00 0.00 4.45
4933 6178 2.490903 CAAAGTCCCTGAGCCATTCAAG 59.509 50.000 0.00 0.00 34.81 3.02
4947 6198 2.435586 CAAGCCTGTCCTCGCCAG 60.436 66.667 0.00 0.00 0.00 4.85
4961 6212 1.302511 GCCAGAAACCCTCGCTTGA 60.303 57.895 0.00 0.00 0.00 3.02
5028 6282 0.605319 CTTTCTGCACCCGGTTGCTA 60.605 55.000 25.28 10.47 43.41 3.49
5057 6315 2.490903 GCAGCTCTGTTTTCATCCATGT 59.509 45.455 0.00 0.00 0.00 3.21
5094 6352 1.899814 ACGTTCTTATCTGTCTGCCCA 59.100 47.619 0.00 0.00 0.00 5.36
5099 6357 2.846206 TCTTATCTGTCTGCCCAACCAT 59.154 45.455 0.00 0.00 0.00 3.55
5109 6367 1.944234 GCCCAACCATTACAAGGCCG 61.944 60.000 0.00 0.00 34.23 6.13
5110 6368 1.510844 CCAACCATTACAAGGCCGC 59.489 57.895 0.00 0.00 0.00 6.53
5111 6369 1.136565 CAACCATTACAAGGCCGCG 59.863 57.895 0.00 0.00 0.00 6.46
5112 6370 1.302993 AACCATTACAAGGCCGCGT 60.303 52.632 4.92 0.19 0.00 6.01
5113 6371 1.582610 AACCATTACAAGGCCGCGTG 61.583 55.000 4.92 6.48 0.00 5.34
5114 6372 2.038269 CCATTACAAGGCCGCGTGT 61.038 57.895 4.92 13.32 0.00 4.49
5115 6373 1.134487 CATTACAAGGCCGCGTGTG 59.866 57.895 17.08 9.29 0.00 3.82
5116 6374 1.302192 ATTACAAGGCCGCGTGTGT 60.302 52.632 17.08 10.93 0.00 3.72
5117 6375 1.573829 ATTACAAGGCCGCGTGTGTG 61.574 55.000 17.08 0.00 0.00 3.82
5118 6376 2.926901 TTACAAGGCCGCGTGTGTGT 62.927 55.000 17.08 6.67 0.00 3.72
5119 6377 4.012895 CAAGGCCGCGTGTGTGTC 62.013 66.667 4.92 0.00 0.00 3.67
5120 6378 4.235762 AAGGCCGCGTGTGTGTCT 62.236 61.111 4.92 0.00 0.00 3.41
5121 6379 4.969196 AGGCCGCGTGTGTGTCTG 62.969 66.667 4.92 0.00 0.00 3.51
5123 6381 4.961511 GCCGCGTGTGTGTCTGGA 62.962 66.667 4.92 0.00 0.00 3.86
5124 6382 2.734723 CCGCGTGTGTGTCTGGAG 60.735 66.667 4.92 0.00 0.00 3.86
5125 6383 2.335011 CGCGTGTGTGTCTGGAGA 59.665 61.111 0.00 0.00 0.00 3.71
5126 6384 2.016704 CGCGTGTGTGTCTGGAGAC 61.017 63.158 0.00 0.00 44.97 3.36
5127 6385 1.364171 GCGTGTGTGTCTGGAGACT 59.636 57.895 8.24 0.00 44.99 3.24
5149 6407 4.459089 GCCCTCGAGACACCCAGC 62.459 72.222 15.71 1.12 0.00 4.85
5150 6408 2.681778 CCCTCGAGACACCCAGCT 60.682 66.667 15.71 0.00 0.00 4.24
5152 6410 2.125753 CTCGAGACACCCAGCTGC 60.126 66.667 6.58 0.00 0.00 5.25
5155 6413 2.031516 CGAGACACCCAGCTGCAAG 61.032 63.158 8.66 1.22 0.00 4.01
5185 6469 1.078918 TGGCCAAGCGAGATCAGTG 60.079 57.895 0.61 0.00 0.00 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.678955 ACCCTGAAAACTATAGTCTCACC 57.321 43.478 5.70 0.00 0.00 4.02
1 2 7.548427 GGTAAACCCTGAAAACTATAGTCTCAC 59.452 40.741 5.70 0.00 0.00 3.51
16 17 1.301623 CCATGCCGGTAAACCCTGA 59.698 57.895 1.90 0.00 0.00 3.86
17 18 2.414785 GCCATGCCGGTAAACCCTG 61.415 63.158 1.90 0.00 36.97 4.45
28 29 3.134127 GGAAGTCACCGCCATGCC 61.134 66.667 0.00 0.00 0.00 4.40
29 30 1.648467 GAAGGAAGTCACCGCCATGC 61.648 60.000 0.00 0.00 34.73 4.06
31 32 1.079127 CGAAGGAAGTCACCGCCAT 60.079 57.895 0.00 0.00 34.73 4.40
32 33 2.342279 CGAAGGAAGTCACCGCCA 59.658 61.111 0.00 0.00 34.73 5.69
65 66 3.643978 GACATGCGGAGATGCGGC 61.644 66.667 0.00 0.00 42.62 6.53
82 84 4.742201 CTCACCGAGGGCACACCG 62.742 72.222 0.00 0.00 46.96 4.94
84 86 1.668151 GTTCTCACCGAGGGCACAC 60.668 63.158 0.00 0.00 0.00 3.82
87 89 1.592400 CGTAGTTCTCACCGAGGGCA 61.592 60.000 0.00 0.00 0.00 5.36
100 111 6.040878 CCGACCTTCATTAAATCTCGTAGTT 58.959 40.000 0.00 0.00 0.00 2.24
104 115 3.793559 CCCGACCTTCATTAAATCTCGT 58.206 45.455 0.00 0.00 0.00 4.18
111 122 1.404986 CGAGTGCCCGACCTTCATTAA 60.405 52.381 0.00 0.00 0.00 1.40
123 134 0.390735 AACCACGTATTCGAGTGCCC 60.391 55.000 0.00 0.00 40.62 5.36
124 135 0.997196 GAACCACGTATTCGAGTGCC 59.003 55.000 0.00 0.00 40.62 5.01
130 141 4.215965 CAACCAAAAGAACCACGTATTCG 58.784 43.478 6.18 0.00 43.34 3.34
136 147 2.789779 CGTCACAACCAAAAGAACCACG 60.790 50.000 0.00 0.00 0.00 4.94
140 151 2.844122 AGCGTCACAACCAAAAGAAC 57.156 45.000 0.00 0.00 0.00 3.01
146 157 2.364324 AGAGAAGTAGCGTCACAACCAA 59.636 45.455 0.00 0.00 0.00 3.67
147 158 1.961394 AGAGAAGTAGCGTCACAACCA 59.039 47.619 0.00 0.00 0.00 3.67
148 159 2.726832 AGAGAAGTAGCGTCACAACC 57.273 50.000 0.00 0.00 0.00 3.77
167 179 3.244805 ACTCCTACGGGATCATCGTCATA 60.245 47.826 14.99 0.44 41.36 2.15
172 184 0.598562 CCACTCCTACGGGATCATCG 59.401 60.000 6.22 6.22 41.36 3.84
181 193 1.191535 TGTTGATCCCCACTCCTACG 58.808 55.000 0.00 0.00 0.00 3.51
188 200 6.483640 GTCTATCTAACATTGTTGATCCCCAC 59.516 42.308 12.30 5.19 0.00 4.61
189 201 6.409234 GGTCTATCTAACATTGTTGATCCCCA 60.409 42.308 12.30 0.00 0.00 4.96
190 202 5.998363 GGTCTATCTAACATTGTTGATCCCC 59.002 44.000 12.30 9.25 0.00 4.81
194 206 5.454755 CCGGGGTCTATCTAACATTGTTGAT 60.455 44.000 12.30 13.70 0.00 2.57
208 220 1.520666 CTCAAACGCCGGGGTCTAT 59.479 57.895 25.87 11.54 0.00 1.98
210 222 4.699522 GCTCAAACGCCGGGGTCT 62.700 66.667 25.87 8.51 0.00 3.85
216 228 4.383602 CCAACCGCTCAAACGCCG 62.384 66.667 0.00 0.00 0.00 6.46
218 230 1.154225 CATCCAACCGCTCAAACGC 60.154 57.895 0.00 0.00 0.00 4.84
219 231 1.234615 ACCATCCAACCGCTCAAACG 61.235 55.000 0.00 0.00 0.00 3.60
242 256 1.138247 CTCTCAAAGCGGCCAATGC 59.862 57.895 2.24 0.00 0.00 3.56
247 261 2.124942 CTCCCTCTCAAAGCGGCC 60.125 66.667 0.00 0.00 0.00 6.13
255 269 1.074423 AACCGTCGTCTCCCTCTCA 59.926 57.895 0.00 0.00 0.00 3.27
267 281 1.186267 AGTCCTCAGGGTCAACCGTC 61.186 60.000 0.00 0.00 46.96 4.79
273 287 2.496070 CGTATTGAAGTCCTCAGGGTCA 59.504 50.000 0.00 0.00 34.81 4.02
275 289 2.816411 TCGTATTGAAGTCCTCAGGGT 58.184 47.619 0.00 0.00 34.81 4.34
276 290 4.408182 AATCGTATTGAAGTCCTCAGGG 57.592 45.455 0.00 0.00 34.81 4.45
278 292 8.480643 AACTAAAATCGTATTGAAGTCCTCAG 57.519 34.615 0.00 0.00 34.81 3.35
286 304 9.997482 GGCTAAATGAACTAAAATCGTATTGAA 57.003 29.630 0.00 0.00 0.00 2.69
322 340 8.771766 CATGTAGATCTATTGACCAAATCAGTG 58.228 37.037 5.57 0.00 38.99 3.66
335 353 4.708177 ACCGCAAAGCATGTAGATCTATT 58.292 39.130 5.57 0.00 0.00 1.73
343 361 8.082852 TCTTTTTATTTTACCGCAAAGCATGTA 58.917 29.630 0.00 0.00 0.00 2.29
345 363 7.344910 TCTTTTTATTTTACCGCAAAGCATG 57.655 32.000 0.00 0.00 0.00 4.06
346 364 7.954788 TTCTTTTTATTTTACCGCAAAGCAT 57.045 28.000 0.00 0.00 0.00 3.79
353 371 8.064814 TGTTTGCAATTCTTTTTATTTTACCGC 58.935 29.630 0.00 0.00 0.00 5.68
361 379 9.382275 GTGGGATATGTTTGCAATTCTTTTTAT 57.618 29.630 0.00 0.00 0.00 1.40
371 389 3.193267 GCTGAAGTGGGATATGTTTGCAA 59.807 43.478 0.00 0.00 0.00 4.08
403 421 7.410174 TCCACCCACATTTTCAGAAATATAGT 58.590 34.615 0.00 0.00 33.78 2.12
405 423 8.112822 TCTTCCACCCACATTTTCAGAAATATA 58.887 33.333 0.00 0.00 33.78 0.86
408 426 5.147032 TCTTCCACCCACATTTTCAGAAAT 58.853 37.500 0.00 0.00 35.90 2.17
410 428 4.141274 TCTCTTCCACCCACATTTTCAGAA 60.141 41.667 0.00 0.00 0.00 3.02
412 430 3.754965 TCTCTTCCACCCACATTTTCAG 58.245 45.455 0.00 0.00 0.00 3.02
413 431 3.498481 CCTCTCTTCCACCCACATTTTCA 60.498 47.826 0.00 0.00 0.00 2.69
414 432 3.084786 CCTCTCTTCCACCCACATTTTC 58.915 50.000 0.00 0.00 0.00 2.29
427 449 0.099791 CGAGCGGTTCTCCTCTCTTC 59.900 60.000 0.00 0.00 41.80 2.87
453 475 2.883386 TCTAGGCGGCTAGTTTAGTAGC 59.117 50.000 36.26 7.86 44.14 3.58
462 484 0.389757 GGGTTTCTCTAGGCGGCTAG 59.610 60.000 33.84 33.84 0.00 3.42
544 571 1.933021 TTTGGTTCTCTCGGAGGCTA 58.067 50.000 4.96 0.00 0.00 3.93
545 572 1.056660 TTTTGGTTCTCTCGGAGGCT 58.943 50.000 4.96 0.00 0.00 4.58
546 573 1.892209 TTTTTGGTTCTCTCGGAGGC 58.108 50.000 4.96 0.00 0.00 4.70
563 590 3.485216 CGTCGCTATTTCGGCTGATTTTT 60.485 43.478 0.00 0.00 30.91 1.94
564 591 2.030457 CGTCGCTATTTCGGCTGATTTT 59.970 45.455 0.00 0.00 30.91 1.82
565 592 1.593006 CGTCGCTATTTCGGCTGATTT 59.407 47.619 0.00 0.00 30.91 2.17
566 593 1.209128 CGTCGCTATTTCGGCTGATT 58.791 50.000 0.00 0.00 30.91 2.57
567 594 0.102481 ACGTCGCTATTTCGGCTGAT 59.898 50.000 0.00 0.00 30.91 2.90
568 595 0.108992 AACGTCGCTATTTCGGCTGA 60.109 50.000 0.00 0.00 30.91 4.26
569 596 0.719465 AAACGTCGCTATTTCGGCTG 59.281 50.000 0.00 0.00 30.91 4.85
570 597 0.997196 GAAACGTCGCTATTTCGGCT 59.003 50.000 0.00 0.00 30.91 5.52
571 598 3.486777 GAAACGTCGCTATTTCGGC 57.513 52.632 0.00 0.00 0.00 5.54
581 608 0.293723 CGGCTAATGTCGAAACGTCG 59.706 55.000 0.00 0.00 45.19 5.12
582 609 0.024619 GCGGCTAATGTCGAAACGTC 59.975 55.000 0.00 0.00 45.19 4.34
583 610 1.356527 GGCGGCTAATGTCGAAACGT 61.357 55.000 0.00 0.00 45.19 3.99
584 611 1.347221 GGCGGCTAATGTCGAAACG 59.653 57.895 0.00 0.00 45.19 3.60
585 612 1.022451 TGGGCGGCTAATGTCGAAAC 61.022 55.000 9.56 0.00 45.19 2.78
586 613 0.742990 CTGGGCGGCTAATGTCGAAA 60.743 55.000 9.56 0.00 45.19 3.46
587 614 1.153449 CTGGGCGGCTAATGTCGAA 60.153 57.895 9.56 0.00 45.19 3.71
588 615 2.499205 CTGGGCGGCTAATGTCGA 59.501 61.111 9.56 0.00 45.19 4.20
589 616 2.588877 CCTGGGCGGCTAATGTCG 60.589 66.667 9.56 0.00 45.15 4.35
590 617 2.203209 CCCTGGGCGGCTAATGTC 60.203 66.667 9.56 0.00 0.00 3.06
591 618 2.690881 TCCCTGGGCGGCTAATGT 60.691 61.111 8.22 0.00 0.00 2.71
592 619 2.203209 GTCCCTGGGCGGCTAATG 60.203 66.667 8.22 0.00 0.00 1.90
593 620 3.861797 CGTCCCTGGGCGGCTAAT 61.862 66.667 18.06 0.00 0.00 1.73
610 637 3.061797 CGTGCTACTTCGATCGATTTGTC 60.062 47.826 20.18 9.18 0.00 3.18
618 645 0.248134 ACGAGCGTGCTACTTCGATC 60.248 55.000 8.00 0.00 38.76 3.69
632 659 1.746727 CTATGCAGTGCACGACGAGC 61.747 60.000 22.44 10.50 43.04 5.03
636 663 2.802667 CGGCTATGCAGTGCACGAC 61.803 63.158 22.44 15.88 43.04 4.34
638 665 4.228097 GCGGCTATGCAGTGCACG 62.228 66.667 22.44 20.04 43.04 5.34
682 715 3.150949 CCTCAGAGGTGTGCCACA 58.849 61.111 8.54 0.00 35.86 4.17
693 1173 1.986757 GCCCTCACAGAGCCTCAGA 60.987 63.158 0.00 0.00 0.00 3.27
694 1174 1.958902 GAGCCCTCACAGAGCCTCAG 61.959 65.000 0.00 0.00 31.55 3.35
695 1175 1.986757 GAGCCCTCACAGAGCCTCA 60.987 63.158 0.00 0.00 31.55 3.86
696 1176 2.730524 GGAGCCCTCACAGAGCCTC 61.731 68.421 0.00 0.00 0.00 4.70
697 1177 2.686835 GGAGCCCTCACAGAGCCT 60.687 66.667 0.00 0.00 0.00 4.58
698 1178 3.005539 TGGAGCCCTCACAGAGCC 61.006 66.667 0.00 0.00 0.00 4.70
700 1180 2.985456 GGTGGAGCCCTCACAGAG 59.015 66.667 0.00 0.00 36.90 3.35
701 1181 2.997315 CGGTGGAGCCCTCACAGA 60.997 66.667 0.00 0.00 36.90 3.41
702 1182 1.903877 ATTCGGTGGAGCCCTCACAG 61.904 60.000 0.00 0.97 36.90 3.66
703 1183 1.488705 AATTCGGTGGAGCCCTCACA 61.489 55.000 0.00 0.00 36.90 3.58
704 1184 0.539986 TAATTCGGTGGAGCCCTCAC 59.460 55.000 0.00 0.00 34.61 3.51
705 1185 0.539986 GTAATTCGGTGGAGCCCTCA 59.460 55.000 0.00 0.00 0.00 3.86
734 1218 1.813513 CTTGGACCCACATGTCAGAC 58.186 55.000 0.00 0.00 36.97 3.51
741 1225 1.077501 CGGATGCTTGGACCCACAT 60.078 57.895 0.00 0.00 0.00 3.21
753 1237 0.168128 GTAACTGTTGGTGCGGATGC 59.832 55.000 2.69 0.00 43.20 3.91
754 1238 0.442310 CGTAACTGTTGGTGCGGATG 59.558 55.000 2.69 0.00 0.00 3.51
755 1239 1.296056 GCGTAACTGTTGGTGCGGAT 61.296 55.000 2.69 0.00 0.00 4.18
756 1240 1.957186 GCGTAACTGTTGGTGCGGA 60.957 57.895 2.69 0.00 0.00 5.54
757 1241 2.554272 GCGTAACTGTTGGTGCGG 59.446 61.111 2.69 0.00 0.00 5.69
758 1242 1.897398 GAGGCGTAACTGTTGGTGCG 61.897 60.000 2.69 4.12 0.00 5.34
759 1243 1.574702 GGAGGCGTAACTGTTGGTGC 61.575 60.000 2.69 4.28 0.00 5.01
760 1244 1.289109 CGGAGGCGTAACTGTTGGTG 61.289 60.000 2.69 0.00 0.00 4.17
761 1245 1.005394 CGGAGGCGTAACTGTTGGT 60.005 57.895 2.69 0.00 0.00 3.67
762 1246 2.388232 GCGGAGGCGTAACTGTTGG 61.388 63.158 2.69 0.00 0.00 3.77
763 1247 1.225376 TTGCGGAGGCGTAACTGTTG 61.225 55.000 2.69 0.00 44.10 3.33
764 1248 1.070105 TTGCGGAGGCGTAACTGTT 59.930 52.632 0.00 0.00 44.10 3.16
765 1249 1.666872 GTTGCGGAGGCGTAACTGT 60.667 57.895 0.00 0.00 44.10 3.55
766 1250 1.225376 TTGTTGCGGAGGCGTAACTG 61.225 55.000 0.00 0.00 44.10 3.16
861 1345 1.439679 GGACAAGAAAGGGCACGTAG 58.560 55.000 0.00 0.00 0.00 3.51
873 1357 4.011517 GGAACCGGCGGGACAAGA 62.012 66.667 31.78 0.00 36.97 3.02
874 1358 2.246761 TATGGAACCGGCGGGACAAG 62.247 60.000 31.78 3.60 36.97 3.16
876 1360 0.759812 TATATGGAACCGGCGGGACA 60.760 55.000 31.78 24.53 36.97 4.02
879 1363 0.604511 GGTTATATGGAACCGGCGGG 60.605 60.000 31.78 12.53 39.62 6.13
886 1376 0.865769 CGGCGCTGGTTATATGGAAC 59.134 55.000 8.83 0.00 0.00 3.62
921 1412 0.821711 TTCACCCACTTTTCTGCGGG 60.822 55.000 0.00 0.00 44.88 6.13
1515 2024 9.597170 GGAACTCGTAGAAATACTCCTATTTTT 57.403 33.333 0.00 0.00 33.44 1.94
1516 2025 8.202811 GGGAACTCGTAGAAATACTCCTATTTT 58.797 37.037 0.00 0.00 33.44 1.82
1517 2026 7.343833 TGGGAACTCGTAGAAATACTCCTATTT 59.656 37.037 0.00 0.00 35.59 1.40
1534 2043 0.170561 ACGAACGATCTGGGAACTCG 59.829 55.000 0.14 0.00 38.34 4.18
1582 2091 9.190858 TCCAAATTATATGCGAATACAAAATGC 57.809 29.630 0.00 0.00 0.00 3.56
1596 2105 7.371159 TCGTCTAGAGCTGTCCAAATTATATG 58.629 38.462 0.00 0.00 0.00 1.78
1619 2128 2.338577 AAGATCCCAGCAAGGAATCG 57.661 50.000 0.00 0.00 40.04 3.34
1647 2156 7.250569 ACGATGCAACTTTTACATGGATAAAG 58.749 34.615 12.24 12.24 35.53 1.85
1654 2163 4.382457 CACCAACGATGCAACTTTTACATG 59.618 41.667 0.00 0.00 0.00 3.21
1690 2210 2.872858 GGGATCTGGTTTATGTCTTCGC 59.127 50.000 0.00 0.00 0.00 4.70
1695 2215 1.134220 TGCGGGGATCTGGTTTATGTC 60.134 52.381 0.00 0.00 0.00 3.06
1712 2232 5.023920 CACACACAAGATTAAATAGCTGCG 58.976 41.667 0.00 0.00 0.00 5.18
1726 2246 3.629438 TCAACATCATGCACACACAAG 57.371 42.857 0.00 0.00 0.00 3.16
1768 2288 7.153985 CAGAGCTTTCATGTTTTAATCCCAAA 58.846 34.615 0.00 0.00 0.00 3.28
1821 2341 1.135689 CACTTCCTTGCGCATGTTACC 60.136 52.381 12.75 0.00 0.00 2.85
1888 2408 5.007682 GGTGCTTCTGGGTCAAACTTATTA 58.992 41.667 0.00 0.00 0.00 0.98
1890 2410 3.074538 AGGTGCTTCTGGGTCAAACTTAT 59.925 43.478 0.00 0.00 0.00 1.73
1891 2411 2.441750 AGGTGCTTCTGGGTCAAACTTA 59.558 45.455 0.00 0.00 0.00 2.24
1892 2412 1.215423 AGGTGCTTCTGGGTCAAACTT 59.785 47.619 0.00 0.00 0.00 2.66
1893 2413 0.846693 AGGTGCTTCTGGGTCAAACT 59.153 50.000 0.00 0.00 0.00 2.66
1914 2434 2.858344 CGGACATCATTAACACGAGGTC 59.142 50.000 7.34 7.34 41.10 3.85
1915 2435 2.232941 ACGGACATCATTAACACGAGGT 59.767 45.455 0.00 0.00 0.00 3.85
1920 2440 4.390603 TGCTAACACGGACATCATTAACAC 59.609 41.667 0.00 0.00 0.00 3.32
1941 2461 3.161450 TAGTGGGGAGCCGGATGC 61.161 66.667 5.05 2.91 41.71 3.91
1942 2462 1.048724 TTCTAGTGGGGAGCCGGATG 61.049 60.000 5.05 0.00 0.00 3.51
1944 2464 1.048724 CATTCTAGTGGGGAGCCGGA 61.049 60.000 5.05 0.00 0.00 5.14
1945 2465 1.447643 CATTCTAGTGGGGAGCCGG 59.552 63.158 0.00 0.00 0.00 6.13
1946 2466 1.227674 GCATTCTAGTGGGGAGCCG 60.228 63.158 0.00 0.00 0.00 5.52
1947 2467 1.424638 TAGCATTCTAGTGGGGAGCC 58.575 55.000 0.00 0.00 0.00 4.70
1948 2468 2.634940 TGATAGCATTCTAGTGGGGAGC 59.365 50.000 0.00 0.00 0.00 4.70
1949 2469 4.346418 ACTTGATAGCATTCTAGTGGGGAG 59.654 45.833 3.04 0.00 31.81 4.30
1951 2471 4.384056 CACTTGATAGCATTCTAGTGGGG 58.616 47.826 16.92 0.03 42.22 4.96
1952 2472 3.812053 GCACTTGATAGCATTCTAGTGGG 59.188 47.826 22.19 7.55 44.45 4.61
1962 2482 2.419673 CGGTCAAATGCACTTGATAGCA 59.580 45.455 14.40 0.00 45.92 3.49
1963 2483 2.677836 TCGGTCAAATGCACTTGATAGC 59.322 45.455 14.40 1.06 37.63 2.97
1964 2484 4.183865 TCTCGGTCAAATGCACTTGATAG 58.816 43.478 14.40 11.75 37.63 2.08
1968 2554 3.495193 CATTCTCGGTCAAATGCACTTG 58.505 45.455 0.36 0.36 0.00 3.16
1991 2577 6.932947 AGACTAAAGATACCACAACTACACC 58.067 40.000 0.00 0.00 0.00 4.16
2024 2612 4.446889 GGTGGGCTCCATCTATCAGAAAAT 60.447 45.833 0.00 0.00 35.28 1.82
2030 2618 1.121407 CCGGTGGGCTCCATCTATCA 61.121 60.000 0.00 0.00 35.28 2.15
2063 2651 4.577875 AGAACAGCCTTCTCTGATTTCAG 58.422 43.478 0.97 0.97 45.08 3.02
2064 2652 4.630644 AGAACAGCCTTCTCTGATTTCA 57.369 40.909 0.00 0.00 37.51 2.69
2065 2653 5.956068 AAAGAACAGCCTTCTCTGATTTC 57.044 39.130 0.00 0.00 37.51 2.17
2066 2654 6.016443 CAGAAAAGAACAGCCTTCTCTGATTT 60.016 38.462 0.00 0.00 41.44 2.17
2067 2655 5.472820 CAGAAAAGAACAGCCTTCTCTGATT 59.527 40.000 0.00 0.00 41.44 2.57
2070 2658 4.384056 TCAGAAAAGAACAGCCTTCTCTG 58.616 43.478 0.00 0.00 40.70 3.35
2071 2659 4.696479 TCAGAAAAGAACAGCCTTCTCT 57.304 40.909 0.00 0.00 0.00 3.10
2072 2660 6.402222 TCTATCAGAAAAGAACAGCCTTCTC 58.598 40.000 0.00 0.00 0.00 2.87
2073 2661 6.365970 TCTATCAGAAAAGAACAGCCTTCT 57.634 37.500 0.00 0.00 0.00 2.85
2074 2662 6.038050 CCATCTATCAGAAAAGAACAGCCTTC 59.962 42.308 0.00 0.00 0.00 3.46
2075 2663 5.884792 CCATCTATCAGAAAAGAACAGCCTT 59.115 40.000 0.00 0.00 0.00 4.35
2076 2664 5.190528 TCCATCTATCAGAAAAGAACAGCCT 59.809 40.000 0.00 0.00 0.00 4.58
2077 2665 5.431765 TCCATCTATCAGAAAAGAACAGCC 58.568 41.667 0.00 0.00 0.00 4.85
2078 2666 5.007528 GCTCCATCTATCAGAAAAGAACAGC 59.992 44.000 0.00 0.00 0.00 4.40
2079 2667 5.526846 GGCTCCATCTATCAGAAAAGAACAG 59.473 44.000 0.00 0.00 0.00 3.16
2080 2668 5.431765 GGCTCCATCTATCAGAAAAGAACA 58.568 41.667 0.00 0.00 0.00 3.18
2081 2669 4.819088 GGGCTCCATCTATCAGAAAAGAAC 59.181 45.833 0.00 0.00 0.00 3.01
2082 2670 4.474651 TGGGCTCCATCTATCAGAAAAGAA 59.525 41.667 0.00 0.00 0.00 2.52
2083 2671 4.040047 TGGGCTCCATCTATCAGAAAAGA 58.960 43.478 0.00 0.00 0.00 2.52
2084 2672 4.133078 GTGGGCTCCATCTATCAGAAAAG 58.867 47.826 0.00 0.00 35.28 2.27
2085 2673 3.117888 GGTGGGCTCCATCTATCAGAAAA 60.118 47.826 0.00 0.00 35.28 2.29
2086 2674 2.439507 GGTGGGCTCCATCTATCAGAAA 59.560 50.000 0.00 0.00 35.28 2.52
2087 2675 2.050144 GGTGGGCTCCATCTATCAGAA 58.950 52.381 0.00 0.00 35.28 3.02
2088 2676 1.722034 GGTGGGCTCCATCTATCAGA 58.278 55.000 0.00 0.00 35.28 3.27
2089 2677 0.319728 CGGTGGGCTCCATCTATCAG 59.680 60.000 3.41 0.00 35.28 2.90
2090 2678 1.121407 CCGGTGGGCTCCATCTATCA 61.121 60.000 0.00 0.00 35.28 2.15
2091 2679 1.674057 CCGGTGGGCTCCATCTATC 59.326 63.158 0.00 0.00 35.28 2.08
2092 2680 3.891817 CCGGTGGGCTCCATCTAT 58.108 61.111 0.00 0.00 35.28 1.98
2102 2690 0.684153 ATGAAATCAAGGCCGGTGGG 60.684 55.000 1.90 0.00 0.00 4.61
2103 2691 1.134946 GAATGAAATCAAGGCCGGTGG 59.865 52.381 1.90 0.00 0.00 4.61
2104 2692 1.818060 TGAATGAAATCAAGGCCGGTG 59.182 47.619 1.90 0.00 0.00 4.94
2105 2693 2.094675 CTGAATGAAATCAAGGCCGGT 58.905 47.619 1.90 0.00 0.00 5.28
2106 2694 2.368439 TCTGAATGAAATCAAGGCCGG 58.632 47.619 0.00 0.00 0.00 6.13
2107 2695 4.439305 TTTCTGAATGAAATCAAGGCCG 57.561 40.909 0.00 0.00 39.50 6.13
2117 2705 9.376075 GTGATACTTCTCTGATTTCTGAATGAA 57.624 33.333 0.00 0.00 0.00 2.57
2118 2706 8.534496 TGTGATACTTCTCTGATTTCTGAATGA 58.466 33.333 0.00 0.00 0.00 2.57
2119 2707 8.713737 TGTGATACTTCTCTGATTTCTGAATG 57.286 34.615 0.00 0.00 0.00 2.67
2120 2708 9.902684 AATGTGATACTTCTCTGATTTCTGAAT 57.097 29.630 0.00 0.00 0.00 2.57
2145 2733 0.180171 CTGGGTGGAGTGTGTGTGAA 59.820 55.000 0.00 0.00 0.00 3.18
2146 2734 0.689412 TCTGGGTGGAGTGTGTGTGA 60.689 55.000 0.00 0.00 0.00 3.58
2147 2735 0.180171 TTCTGGGTGGAGTGTGTGTG 59.820 55.000 0.00 0.00 0.00 3.82
2148 2736 0.180406 GTTCTGGGTGGAGTGTGTGT 59.820 55.000 0.00 0.00 0.00 3.72
2149 2737 0.535102 GGTTCTGGGTGGAGTGTGTG 60.535 60.000 0.00 0.00 0.00 3.82
2150 2738 0.986019 TGGTTCTGGGTGGAGTGTGT 60.986 55.000 0.00 0.00 0.00 3.72
2194 2782 4.440112 GGTGTAGTTTTTCAGCTTTGCAGT 60.440 41.667 0.00 0.00 0.00 4.40
2205 2793 7.440255 TGAGTTAGCTTGTAGGTGTAGTTTTTC 59.560 37.037 0.00 0.00 0.00 2.29
2209 2797 6.415206 TTGAGTTAGCTTGTAGGTGTAGTT 57.585 37.500 0.00 0.00 0.00 2.24
2213 2802 5.433526 TGTTTTGAGTTAGCTTGTAGGTGT 58.566 37.500 0.00 0.00 0.00 4.16
2216 2805 4.515191 TGCTGTTTTGAGTTAGCTTGTAGG 59.485 41.667 0.00 0.00 37.10 3.18
2224 2813 5.947228 TCCTGAATGCTGTTTTGAGTTAG 57.053 39.130 0.00 0.00 0.00 2.34
2228 2817 5.775686 TGAAATCCTGAATGCTGTTTTGAG 58.224 37.500 0.00 0.00 0.00 3.02
2229 2818 5.279106 CCTGAAATCCTGAATGCTGTTTTGA 60.279 40.000 0.00 0.00 0.00 2.69
2231 2820 4.590222 ACCTGAAATCCTGAATGCTGTTTT 59.410 37.500 0.00 0.00 0.00 2.43
2232 2821 4.154942 ACCTGAAATCCTGAATGCTGTTT 58.845 39.130 0.00 0.00 0.00 2.83
2235 2824 4.774124 TCTACCTGAAATCCTGAATGCTG 58.226 43.478 0.00 0.00 0.00 4.41
2237 2826 5.415701 TGTTTCTACCTGAAATCCTGAATGC 59.584 40.000 0.00 0.00 45.19 3.56
2238 2827 7.452880 TTGTTTCTACCTGAAATCCTGAATG 57.547 36.000 0.00 0.00 45.19 2.67
2240 2829 7.777910 TCTTTTGTTTCTACCTGAAATCCTGAA 59.222 33.333 0.00 0.00 45.19 3.02
2241 2830 7.228706 GTCTTTTGTTTCTACCTGAAATCCTGA 59.771 37.037 0.00 0.00 45.19 3.86
2242 2831 7.013274 TGTCTTTTGTTTCTACCTGAAATCCTG 59.987 37.037 0.00 0.00 45.19 3.86
2243 2832 7.060421 TGTCTTTTGTTTCTACCTGAAATCCT 58.940 34.615 0.00 0.00 45.19 3.24
2244 2833 7.272037 TGTCTTTTGTTTCTACCTGAAATCC 57.728 36.000 0.00 0.00 45.19 3.01
2245 2834 9.581099 TTTTGTCTTTTGTTTCTACCTGAAATC 57.419 29.630 0.00 0.00 45.19 2.17
2246 2835 9.366216 GTTTTGTCTTTTGTTTCTACCTGAAAT 57.634 29.630 0.00 0.00 45.19 2.17
2247 2836 7.539366 CGTTTTGTCTTTTGTTTCTACCTGAAA 59.461 33.333 0.00 0.00 41.85 2.69
2260 2849 6.446659 AACAACAACTCGTTTTGTCTTTTG 57.553 33.333 5.13 3.40 38.82 2.44
2269 2858 7.201401 GCTTTTGATGTAAACAACAACTCGTTT 60.201 33.333 5.42 0.00 42.70 3.60
2279 2869 8.445275 TTCTGTCTAGCTTTTGATGTAAACAA 57.555 30.769 0.00 0.00 0.00 2.83
2311 2904 0.883833 GAGTCCATTGGTGCCTGTTG 59.116 55.000 1.86 0.00 0.00 3.33
2329 2922 2.301009 GTTGTCCCCTTTACTTCCTCGA 59.699 50.000 0.00 0.00 0.00 4.04
2351 2944 6.701340 TCAGCATGAGACTAACAATGTAGTT 58.299 36.000 0.00 0.00 42.56 2.24
2372 2965 4.338012 TGCCATGGCTGGAATATTATCAG 58.662 43.478 35.53 11.76 46.37 2.90
2375 2968 3.507233 CGTTGCCATGGCTGGAATATTAT 59.493 43.478 35.53 0.00 46.37 1.28
2378 2971 1.321474 CGTTGCCATGGCTGGAATAT 58.679 50.000 35.53 0.00 46.37 1.28
2379 2972 0.034574 ACGTTGCCATGGCTGGAATA 60.035 50.000 35.53 13.42 46.37 1.75
2392 2985 1.732259 CAGGAGTTGTATGGACGTTGC 59.268 52.381 0.00 0.00 0.00 4.17
2406 2999 1.604593 GCAATGGTGGTGCAGGAGT 60.605 57.895 0.00 0.00 41.80 3.85
2414 3007 1.064463 CCATAGACTGGCAATGGTGGT 60.064 52.381 7.61 0.00 38.47 4.16
2418 3011 2.553904 GGATCCCATAGACTGGCAATGG 60.554 54.545 8.65 8.65 44.46 3.16
2435 3028 0.251341 AAGGTGTTGTGGCAGGGATC 60.251 55.000 0.00 0.00 0.00 3.36
2445 3038 1.583054 GTGCTCTTCGAAGGTGTTGT 58.417 50.000 24.37 0.00 0.00 3.32
2451 3044 2.072298 CAGAAAGGTGCTCTTCGAAGG 58.928 52.381 24.37 15.82 33.94 3.46
2453 3046 1.202639 TGCAGAAAGGTGCTCTTCGAA 60.203 47.619 0.00 0.00 44.32 3.71
2454 3047 0.392706 TGCAGAAAGGTGCTCTTCGA 59.607 50.000 0.00 0.00 44.32 3.71
2455 3048 0.795085 CTGCAGAAAGGTGCTCTTCG 59.205 55.000 8.42 0.00 44.32 3.79
2456 3049 1.163554 CCTGCAGAAAGGTGCTCTTC 58.836 55.000 17.39 0.00 44.32 2.87
2457 3050 0.251077 CCCTGCAGAAAGGTGCTCTT 60.251 55.000 17.39 0.00 44.32 2.85
2458 3051 1.377994 CCCTGCAGAAAGGTGCTCT 59.622 57.895 17.39 0.00 44.32 4.09
2459 3052 1.676967 CCCCTGCAGAAAGGTGCTC 60.677 63.158 17.39 0.00 44.32 4.26
2460 3053 2.437897 CCCCTGCAGAAAGGTGCT 59.562 61.111 17.39 0.00 44.32 4.40
2461 3054 3.376918 GCCCCTGCAGAAAGGTGC 61.377 66.667 17.39 9.87 44.27 5.01
2605 3199 7.667219 TGCAGGAAGAGACAGAAAATTTCTTAT 59.333 33.333 5.36 0.00 38.11 1.73
2613 3207 4.422073 TTCTGCAGGAAGAGACAGAAAA 57.578 40.909 15.13 0.00 43.99 2.29
2629 3223 3.004944 TCCGGTTGGTTTAATGTTTCTGC 59.995 43.478 0.00 0.00 36.30 4.26
2673 3267 3.084786 GCTGGGAGTGAAACATAAGCTT 58.915 45.455 3.48 3.48 41.43 3.74
2674 3268 2.040278 TGCTGGGAGTGAAACATAAGCT 59.960 45.455 0.00 0.00 41.43 3.74
2700 3294 9.057089 ACTAAATATGTTTGGATTGTAGCTAGC 57.943 33.333 6.62 6.62 31.05 3.42
2913 3507 1.717645 GGCACTCTACACGTAAACACG 59.282 52.381 0.00 0.00 39.31 4.49
2979 3573 1.229131 TATGGGACGGAGGGAGTACT 58.771 55.000 0.00 0.00 0.00 2.73
2980 3574 2.077687 TTATGGGACGGAGGGAGTAC 57.922 55.000 0.00 0.00 0.00 2.73
2981 3575 4.687262 ATATTATGGGACGGAGGGAGTA 57.313 45.455 0.00 0.00 0.00 2.59
2982 3576 3.562108 ATATTATGGGACGGAGGGAGT 57.438 47.619 0.00 0.00 0.00 3.85
2983 3577 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
2984 3578 5.269991 CTCTTATATTATGGGACGGAGGGA 58.730 45.833 0.00 0.00 0.00 4.20
2985 3579 4.141914 GCTCTTATATTATGGGACGGAGGG 60.142 50.000 0.00 0.00 0.00 4.30
2986 3580 4.440250 CGCTCTTATATTATGGGACGGAGG 60.440 50.000 0.00 0.00 0.00 4.30
2987 3581 4.158025 ACGCTCTTATATTATGGGACGGAG 59.842 45.833 0.00 0.00 0.00 4.63
2988 3582 4.084287 ACGCTCTTATATTATGGGACGGA 58.916 43.478 0.00 0.00 0.00 4.69
2989 3583 4.451629 ACGCTCTTATATTATGGGACGG 57.548 45.455 0.00 0.00 0.00 4.79
2990 3584 6.780706 AAAACGCTCTTATATTATGGGACG 57.219 37.500 0.00 0.00 0.00 4.79
2991 3585 8.068380 GTCAAAAACGCTCTTATATTATGGGAC 58.932 37.037 0.00 0.00 0.00 4.46
2992 3586 7.771361 TGTCAAAAACGCTCTTATATTATGGGA 59.229 33.333 0.00 0.00 0.00 4.37
2993 3587 7.855904 GTGTCAAAAACGCTCTTATATTATGGG 59.144 37.037 0.00 0.00 35.42 4.00
2994 3588 8.612619 AGTGTCAAAAACGCTCTTATATTATGG 58.387 33.333 0.00 0.00 45.69 2.74
2995 3589 9.425893 CAGTGTCAAAAACGCTCTTATATTATG 57.574 33.333 0.00 0.00 45.69 1.90
2996 3590 8.612619 CCAGTGTCAAAAACGCTCTTATATTAT 58.387 33.333 0.00 0.00 45.69 1.28
2997 3591 7.065324 CCCAGTGTCAAAAACGCTCTTATATTA 59.935 37.037 0.00 0.00 45.69 0.98
2998 3592 6.128007 CCCAGTGTCAAAAACGCTCTTATATT 60.128 38.462 0.00 0.00 45.69 1.28
2999 3593 5.354234 CCCAGTGTCAAAAACGCTCTTATAT 59.646 40.000 0.00 0.00 45.69 0.86
3000 3594 4.693566 CCCAGTGTCAAAAACGCTCTTATA 59.306 41.667 0.00 0.00 45.69 0.98
3001 3595 3.502211 CCCAGTGTCAAAAACGCTCTTAT 59.498 43.478 0.00 0.00 45.69 1.73
3002 3596 2.875933 CCCAGTGTCAAAAACGCTCTTA 59.124 45.455 0.00 0.00 45.69 2.10
3003 3597 1.676006 CCCAGTGTCAAAAACGCTCTT 59.324 47.619 0.00 0.00 45.69 2.85
3004 3598 1.134220 TCCCAGTGTCAAAAACGCTCT 60.134 47.619 0.00 0.00 45.69 4.09
3005 3599 1.002792 GTCCCAGTGTCAAAAACGCTC 60.003 52.381 0.00 0.00 45.69 5.03
3007 3601 0.316689 CGTCCCAGTGTCAAAAACGC 60.317 55.000 0.00 0.00 38.74 4.84
3008 3602 0.306533 CCGTCCCAGTGTCAAAAACG 59.693 55.000 0.00 0.00 0.00 3.60
3009 3603 1.602377 CTCCGTCCCAGTGTCAAAAAC 59.398 52.381 0.00 0.00 0.00 2.43
3010 3604 1.476110 CCTCCGTCCCAGTGTCAAAAA 60.476 52.381 0.00 0.00 0.00 1.94
3011 3605 0.107831 CCTCCGTCCCAGTGTCAAAA 59.892 55.000 0.00 0.00 0.00 2.44
3012 3606 1.752198 CCTCCGTCCCAGTGTCAAA 59.248 57.895 0.00 0.00 0.00 2.69
3013 3607 2.214216 CCCTCCGTCCCAGTGTCAA 61.214 63.158 0.00 0.00 0.00 3.18
3014 3608 2.603473 CCCTCCGTCCCAGTGTCA 60.603 66.667 0.00 0.00 0.00 3.58
3015 3609 2.283676 TCCCTCCGTCCCAGTGTC 60.284 66.667 0.00 0.00 0.00 3.67
3016 3610 2.283966 CTCCCTCCGTCCCAGTGT 60.284 66.667 0.00 0.00 0.00 3.55
3017 3611 2.037367 TCTCCCTCCGTCCCAGTG 59.963 66.667 0.00 0.00 0.00 3.66
3018 3612 2.360980 CTCTCCCTCCGTCCCAGT 59.639 66.667 0.00 0.00 0.00 4.00
3019 3613 2.055042 CACTCTCCCTCCGTCCCAG 61.055 68.421 0.00 0.00 0.00 4.45
3020 3614 1.503401 TACACTCTCCCTCCGTCCCA 61.503 60.000 0.00 0.00 0.00 4.37
3021 3615 0.324091 TTACACTCTCCCTCCGTCCC 60.324 60.000 0.00 0.00 0.00 4.46
3022 3616 1.553706 TTTACACTCTCCCTCCGTCC 58.446 55.000 0.00 0.00 0.00 4.79
3023 3617 3.672767 TTTTTACACTCTCCCTCCGTC 57.327 47.619 0.00 0.00 0.00 4.79
3040 3634 6.204108 CCGTCCCATAATATAAGAGCGTTTTT 59.796 38.462 0.00 0.00 0.00 1.94
3041 3635 5.699458 CCGTCCCATAATATAAGAGCGTTTT 59.301 40.000 0.00 0.00 0.00 2.43
3042 3636 5.011329 TCCGTCCCATAATATAAGAGCGTTT 59.989 40.000 0.00 0.00 0.00 3.60
3043 3637 4.525487 TCCGTCCCATAATATAAGAGCGTT 59.475 41.667 0.00 0.00 0.00 4.84
3044 3638 4.084287 TCCGTCCCATAATATAAGAGCGT 58.916 43.478 0.00 0.00 0.00 5.07
3045 3639 4.440250 CCTCCGTCCCATAATATAAGAGCG 60.440 50.000 0.00 0.00 0.00 5.03
3046 3640 4.141914 CCCTCCGTCCCATAATATAAGAGC 60.142 50.000 0.00 0.00 0.00 4.09
3047 3641 5.269991 TCCCTCCGTCCCATAATATAAGAG 58.730 45.833 0.00 0.00 0.00 2.85
3048 3642 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
3049 3643 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
3050 3644 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
3051 3645 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
3052 3646 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
3053 3647 3.400322 AGTACTCCCTCCGTCCCATAATA 59.600 47.826 0.00 0.00 0.00 0.98
3054 3648 2.179424 AGTACTCCCTCCGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
3055 3649 1.572415 AGTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
3056 3650 1.229131 AGTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
3057 3651 1.133544 GTAGTACTCCCTCCGTCCCAT 60.134 57.143 0.00 0.00 0.00 4.00
3058 3652 0.257039 GTAGTACTCCCTCCGTCCCA 59.743 60.000 0.00 0.00 0.00 4.37
3059 3653 0.257039 TGTAGTACTCCCTCCGTCCC 59.743 60.000 0.00 0.00 0.00 4.46
3060 3654 1.064832 ACTGTAGTACTCCCTCCGTCC 60.065 57.143 0.00 0.00 0.00 4.79
3061 3655 2.416680 ACTGTAGTACTCCCTCCGTC 57.583 55.000 0.00 0.00 0.00 4.79
3062 3656 3.110705 TCTACTGTAGTACTCCCTCCGT 58.889 50.000 14.11 0.00 0.00 4.69
3063 3657 3.834489 TCTACTGTAGTACTCCCTCCG 57.166 52.381 14.11 0.00 0.00 4.63
3064 3658 5.051409 ACATCTACTGTAGTACTCCCTCC 57.949 47.826 14.11 0.00 35.91 4.30
3065 3659 5.221087 GCAACATCTACTGTAGTACTCCCTC 60.221 48.000 14.11 0.00 36.98 4.30
3066 3660 4.645588 GCAACATCTACTGTAGTACTCCCT 59.354 45.833 14.11 0.00 36.98 4.20
3067 3661 4.645588 AGCAACATCTACTGTAGTACTCCC 59.354 45.833 14.11 0.00 36.98 4.30
3068 3662 5.838531 AGCAACATCTACTGTAGTACTCC 57.161 43.478 14.11 0.00 36.98 3.85
3069 3663 6.853720 TCAAGCAACATCTACTGTAGTACTC 58.146 40.000 14.11 0.00 36.98 2.59
3213 3809 8.535335 ACTGATGATTCAACTATAGAACACTGT 58.465 33.333 6.78 0.00 0.00 3.55
3242 3838 5.197451 TGGTGTAACACAGTTTTCCTCATT 58.803 37.500 0.00 0.00 39.98 2.57
3243 3839 4.787551 TGGTGTAACACAGTTTTCCTCAT 58.212 39.130 0.00 0.00 39.98 2.90
3244 3840 4.223556 TGGTGTAACACAGTTTTCCTCA 57.776 40.909 0.00 0.00 39.98 3.86
3350 3946 7.287927 TCCACTATGGAGTATAAGACCTTTCAG 59.712 40.741 0.00 0.00 42.67 3.02
3428 4120 6.036517 GTGAATATGAGAAGGTACAGCAACAG 59.963 42.308 0.00 0.00 0.00 3.16
3453 4145 7.086376 CAGAATGTACATTTCAGTTTTCCCTG 58.914 38.462 21.63 15.08 0.00 4.45
3494 4186 7.118496 TCCCTCAACAAAATAAGCTTGAAAA 57.882 32.000 9.86 0.00 0.00 2.29
3505 4200 4.961438 ACAGCAATTCCCTCAACAAAAT 57.039 36.364 0.00 0.00 0.00 1.82
3694 4389 0.871163 CAGCTTGGTTTGTGCCGTTG 60.871 55.000 0.00 0.00 0.00 4.10
3700 4395 0.311790 ACATCGCAGCTTGGTTTGTG 59.688 50.000 0.00 0.00 0.00 3.33
3775 4470 1.034292 GCCATGGCTGGAGAACCTTC 61.034 60.000 29.98 0.00 46.37 3.46
3922 4617 1.051193 CGTGTATCGTCCGTATCGCG 61.051 60.000 0.00 0.00 36.11 5.87
3988 4683 0.179006 GGCCAGGTGGAATCCTCATC 60.179 60.000 0.00 0.00 35.37 2.92
4051 4746 2.796032 CGACTGCAGATATGTTCGCTCA 60.796 50.000 23.35 0.00 0.00 4.26
4133 4882 2.741985 GGCAACCCAAAATGGCGC 60.742 61.111 0.00 0.00 35.79 6.53
4135 4884 1.003476 CCAGGCAACCCAAAATGGC 60.003 57.895 0.00 0.00 42.00 4.40
4234 4983 8.456221 TTGGAAGGGGGTTTAATCATTATTTT 57.544 30.769 0.00 0.00 0.00 1.82
4249 4998 6.383726 TCATTCTTATCAAAATTGGAAGGGGG 59.616 38.462 8.10 0.00 0.00 5.40
4274 5023 5.510349 CCATAACAGTCAGTCATCATCCGAT 60.510 44.000 0.00 0.00 0.00 4.18
4277 5026 5.282055 TCCATAACAGTCAGTCATCATCC 57.718 43.478 0.00 0.00 0.00 3.51
4283 5032 6.763135 GCATTCTTATCCATAACAGTCAGTCA 59.237 38.462 0.00 0.00 0.00 3.41
4284 5033 6.989169 AGCATTCTTATCCATAACAGTCAGTC 59.011 38.462 0.00 0.00 0.00 3.51
4285 5034 6.893583 AGCATTCTTATCCATAACAGTCAGT 58.106 36.000 0.00 0.00 0.00 3.41
4308 5057 5.588958 TCCATAACAGTCAGTCATCAGAG 57.411 43.478 0.00 0.00 0.00 3.35
4328 5077 2.290093 GCTAGCATTCAAGCTCACATCC 59.710 50.000 10.63 0.00 45.26 3.51
4329 5078 2.941064 TGCTAGCATTCAAGCTCACATC 59.059 45.455 14.93 0.00 45.26 3.06
4330 5079 2.681848 GTGCTAGCATTCAAGCTCACAT 59.318 45.455 22.51 0.00 45.26 3.21
4331 5080 2.079158 GTGCTAGCATTCAAGCTCACA 58.921 47.619 22.51 0.00 45.26 3.58
4336 5085 1.262683 GATCGGTGCTAGCATTCAAGC 59.737 52.381 22.51 6.44 39.25 4.01
4351 5100 0.531532 CAGCCCAGTAAGCAGATCGG 60.532 60.000 0.00 0.00 0.00 4.18
4352 5101 0.461548 TCAGCCCAGTAAGCAGATCG 59.538 55.000 0.00 0.00 0.00 3.69
4400 5149 3.561310 GGCTTTATCATCGCATCTCACAA 59.439 43.478 0.00 0.00 0.00 3.33
4404 5153 2.771089 TGGGCTTTATCATCGCATCTC 58.229 47.619 0.00 0.00 0.00 2.75
4408 5157 2.221169 GTCATGGGCTTTATCATCGCA 58.779 47.619 0.00 0.00 0.00 5.10
4414 5163 1.202486 TCGTCCGTCATGGGCTTTATC 60.202 52.381 0.00 0.00 41.63 1.75
4416 5165 0.828022 ATCGTCCGTCATGGGCTTTA 59.172 50.000 0.00 0.00 41.63 1.85
4460 5209 1.852067 ATCGGGCCGAAATAATGCGC 61.852 55.000 34.58 0.00 39.99 6.09
4461 5210 0.110238 CATCGGGCCGAAATAATGCG 60.110 55.000 34.58 9.88 39.99 4.73
4498 5247 0.918983 TTAGGGGTTGGAGATGCAGG 59.081 55.000 0.00 0.00 0.00 4.85
4518 5267 6.182627 TCATGGAGATGCAGACTACATTTTT 58.817 36.000 15.83 0.00 36.87 1.94
4519 5268 5.748402 TCATGGAGATGCAGACTACATTTT 58.252 37.500 15.83 0.00 36.87 1.82
4520 5269 5.363562 TCATGGAGATGCAGACTACATTT 57.636 39.130 15.83 0.00 36.87 2.32
4521 5270 5.563876 ATCATGGAGATGCAGACTACATT 57.436 39.130 15.83 3.78 36.87 2.71
4522 5271 5.306394 CAATCATGGAGATGCAGACTACAT 58.694 41.667 13.52 13.52 39.22 2.29
4523 5272 4.700700 CAATCATGGAGATGCAGACTACA 58.299 43.478 10.38 10.38 36.96 2.74
4538 5287 2.589798 AAAGCCAATCGCCAATCATG 57.410 45.000 0.00 0.00 38.78 3.07
4539 5288 2.419021 CCAAAAGCCAATCGCCAATCAT 60.419 45.455 0.00 0.00 38.78 2.45
4540 5289 1.067000 CCAAAAGCCAATCGCCAATCA 60.067 47.619 0.00 0.00 38.78 2.57
4541 5290 1.643880 CCAAAAGCCAATCGCCAATC 58.356 50.000 0.00 0.00 38.78 2.67
4553 5302 0.179137 GCGTTATGGCTCCCAAAAGC 60.179 55.000 0.00 0.00 36.95 3.51
4564 5313 2.114670 CCAGTGGCCTGCGTTATGG 61.115 63.158 3.32 0.00 37.38 2.74
4565 5314 2.764314 GCCAGTGGCCTGCGTTATG 61.764 63.158 24.53 0.00 44.06 1.90
4566 5315 2.438434 GCCAGTGGCCTGCGTTAT 60.438 61.111 24.53 0.00 44.06 1.89
4576 5325 2.291741 GAGTGAAAGTTGAAGCCAGTGG 59.708 50.000 4.20 4.20 0.00 4.00
4577 5326 2.945008 TGAGTGAAAGTTGAAGCCAGTG 59.055 45.455 0.00 0.00 0.00 3.66
4578 5327 3.281727 TGAGTGAAAGTTGAAGCCAGT 57.718 42.857 0.00 0.00 0.00 4.00
4579 5328 4.843220 ATTGAGTGAAAGTTGAAGCCAG 57.157 40.909 0.00 0.00 0.00 4.85
4580 5329 4.761739 CCTATTGAGTGAAAGTTGAAGCCA 59.238 41.667 0.00 0.00 0.00 4.75
4581 5330 4.379918 GCCTATTGAGTGAAAGTTGAAGCC 60.380 45.833 0.00 0.00 0.00 4.35
4617 5366 4.225942 TGGATTGAGGTTGCTGAATCTACT 59.774 41.667 0.00 0.00 0.00 2.57
4636 5857 1.134907 CGGCGGTAACTACAGTTGGAT 60.135 52.381 0.00 0.00 38.90 3.41
4637 5858 0.244450 CGGCGGTAACTACAGTTGGA 59.756 55.000 0.00 0.00 38.90 3.53
4638 5859 1.356527 GCGGCGGTAACTACAGTTGG 61.357 60.000 9.78 0.00 38.90 3.77
4639 5860 0.668096 TGCGGCGGTAACTACAGTTG 60.668 55.000 9.78 0.00 38.90 3.16
4640 5861 0.248289 ATGCGGCGGTAACTACAGTT 59.752 50.000 9.78 0.00 41.73 3.16
4641 5862 0.459585 CATGCGGCGGTAACTACAGT 60.460 55.000 9.78 0.00 0.00 3.55
4642 5863 1.151777 CCATGCGGCGGTAACTACAG 61.152 60.000 9.78 0.00 0.00 2.74
4643 5864 1.153529 CCATGCGGCGGTAACTACA 60.154 57.895 9.78 0.00 0.00 2.74
4644 5865 0.874607 CTCCATGCGGCGGTAACTAC 60.875 60.000 9.78 0.00 0.00 2.73
4645 5866 1.038681 TCTCCATGCGGCGGTAACTA 61.039 55.000 9.78 0.00 0.00 2.24
4646 5867 1.686325 ATCTCCATGCGGCGGTAACT 61.686 55.000 9.78 0.00 0.00 2.24
4647 5868 1.227556 ATCTCCATGCGGCGGTAAC 60.228 57.895 9.78 0.00 0.00 2.50
4648 5869 1.227527 CATCTCCATGCGGCGGTAA 60.228 57.895 9.78 0.00 0.00 2.85
4649 5870 2.421314 CATCTCCATGCGGCGGTA 59.579 61.111 9.78 0.00 0.00 4.02
4650 5871 4.552365 CCATCTCCATGCGGCGGT 62.552 66.667 9.78 0.00 0.00 5.68
4651 5872 4.240103 TCCATCTCCATGCGGCGG 62.240 66.667 9.78 0.00 0.00 6.13
4652 5873 2.664185 CTCCATCTCCATGCGGCG 60.664 66.667 0.51 0.51 0.00 6.46
4653 5874 0.749454 AAACTCCATCTCCATGCGGC 60.749 55.000 0.00 0.00 0.00 6.53
4654 5875 1.303309 GAAACTCCATCTCCATGCGG 58.697 55.000 0.00 0.00 0.00 5.69
4655 5876 1.134280 AGGAAACTCCATCTCCATGCG 60.134 52.381 0.00 0.00 39.61 4.73
4656 5877 2.686915 CAAGGAAACTCCATCTCCATGC 59.313 50.000 0.00 0.00 42.68 4.06
4657 5878 3.285484 CCAAGGAAACTCCATCTCCATG 58.715 50.000 0.00 0.00 42.68 3.66
4658 5879 2.243221 CCCAAGGAAACTCCATCTCCAT 59.757 50.000 0.00 0.00 42.68 3.41
4659 5880 1.635487 CCCAAGGAAACTCCATCTCCA 59.365 52.381 0.00 0.00 42.68 3.86
4660 5881 1.916181 TCCCAAGGAAACTCCATCTCC 59.084 52.381 0.00 0.00 42.68 3.71
4661 5882 2.305927 TGTCCCAAGGAAACTCCATCTC 59.694 50.000 0.00 0.00 42.68 2.75
4662 5883 2.307098 CTGTCCCAAGGAAACTCCATCT 59.693 50.000 0.00 0.00 42.68 2.90
4663 5884 2.619074 CCTGTCCCAAGGAAACTCCATC 60.619 54.545 0.00 0.00 42.68 3.51
4664 5885 1.355720 CCTGTCCCAAGGAAACTCCAT 59.644 52.381 0.00 0.00 42.68 3.41
4790 6011 1.188219 TCAGGTCAGGTCAGGTCAGC 61.188 60.000 0.00 0.00 0.00 4.26
4791 6012 0.894141 CTCAGGTCAGGTCAGGTCAG 59.106 60.000 0.00 0.00 0.00 3.51
4792 6013 1.188219 GCTCAGGTCAGGTCAGGTCA 61.188 60.000 0.00 0.00 0.00 4.02
4793 6014 0.902516 AGCTCAGGTCAGGTCAGGTC 60.903 60.000 0.00 0.00 0.00 3.85
4794 6015 0.902516 GAGCTCAGGTCAGGTCAGGT 60.903 60.000 9.40 0.00 40.13 4.00
4795 6016 0.902048 TGAGCTCAGGTCAGGTCAGG 60.902 60.000 13.74 0.00 44.19 3.86
4796 6017 2.663566 TGAGCTCAGGTCAGGTCAG 58.336 57.895 13.74 0.00 44.19 3.51
4797 6018 4.952482 TGAGCTCAGGTCAGGTCA 57.048 55.556 13.74 0.00 46.29 4.02
4810 6031 1.316651 GAATTGGATGCCTCCTGAGC 58.683 55.000 9.61 0.00 42.59 4.26
4816 6037 1.529244 CCCCGGAATTGGATGCCTC 60.529 63.158 0.73 0.00 0.00 4.70
4871 6098 0.905357 ACCGGATCCCTTCACAAGAG 59.095 55.000 9.46 0.00 0.00 2.85
4887 6132 1.151668 CAGCAACAGAAGGAGAACCG 58.848 55.000 0.00 0.00 41.83 4.44
4904 6149 2.630158 CTCAGGGACTTTGATCTGCAG 58.370 52.381 7.63 7.63 34.60 4.41
4914 6159 1.615384 GCTTGAATGGCTCAGGGACTT 60.615 52.381 0.00 0.00 34.60 3.01
4919 6164 0.323178 ACAGGCTTGAATGGCTCAGG 60.323 55.000 1.40 0.00 41.04 3.86
4920 6165 1.093159 GACAGGCTTGAATGGCTCAG 58.907 55.000 1.40 0.00 41.04 3.35
4922 6167 0.034670 AGGACAGGCTTGAATGGCTC 60.035 55.000 1.40 0.00 41.04 4.70
4933 6178 2.035442 GTTTCTGGCGAGGACAGGC 61.035 63.158 0.00 0.00 39.54 4.85
5028 6282 1.557269 AAACAGAGCTGCCGGGAGAT 61.557 55.000 29.09 23.05 0.00 2.75
5094 6352 1.302993 ACGCGGCCTTGTAATGGTT 60.303 52.632 12.47 0.00 32.80 3.67
5099 6357 2.109387 ACACACGCGGCCTTGTAA 59.891 55.556 12.47 0.00 0.00 2.41
5109 6367 3.938112 GTCTCCAGACACACACGC 58.062 61.111 1.61 0.00 44.18 5.34
5117 6375 1.004440 GGGCACACAGTCTCCAGAC 60.004 63.158 0.00 0.00 45.08 3.51
5118 6376 1.152247 AGGGCACACAGTCTCCAGA 60.152 57.895 0.00 0.00 0.00 3.86
5119 6377 1.294780 GAGGGCACACAGTCTCCAG 59.705 63.158 0.00 0.00 0.00 3.86
5120 6378 2.574018 CGAGGGCACACAGTCTCCA 61.574 63.158 0.00 0.00 0.00 3.86
5121 6379 2.219325 CTCGAGGGCACACAGTCTCC 62.219 65.000 3.91 0.00 0.00 3.71
5122 6380 1.214062 CTCGAGGGCACACAGTCTC 59.786 63.158 3.91 0.00 0.00 3.36
5123 6381 1.228583 TCTCGAGGGCACACAGTCT 60.229 57.895 13.56 0.00 0.00 3.24
5124 6382 1.080434 GTCTCGAGGGCACACAGTC 60.080 63.158 13.56 0.00 0.00 3.51
5125 6383 1.832608 TGTCTCGAGGGCACACAGT 60.833 57.895 13.56 0.00 0.00 3.55
5126 6384 1.373497 GTGTCTCGAGGGCACACAG 60.373 63.158 23.63 0.00 40.22 3.66
5127 6385 2.734591 GTGTCTCGAGGGCACACA 59.265 61.111 23.63 13.71 40.22 3.72
5149 6407 1.129998 CCAGAGACGATTTGCTTGCAG 59.870 52.381 0.00 0.00 0.00 4.41
5150 6408 1.159285 CCAGAGACGATTTGCTTGCA 58.841 50.000 0.00 0.00 0.00 4.08
5152 6410 0.449388 GGCCAGAGACGATTTGCTTG 59.551 55.000 0.00 0.00 0.00 4.01
5155 6413 0.449388 CTTGGCCAGAGACGATTTGC 59.551 55.000 5.11 0.00 0.00 3.68
5156 6414 0.449388 GCTTGGCCAGAGACGATTTG 59.551 55.000 5.11 0.00 0.00 2.32
5157 6415 1.021390 CGCTTGGCCAGAGACGATTT 61.021 55.000 5.11 0.00 0.00 2.17
5159 6417 2.185350 CGCTTGGCCAGAGACGAT 59.815 61.111 5.11 0.00 0.00 3.73
5160 6418 2.989253 TCGCTTGGCCAGAGACGA 60.989 61.111 5.11 15.51 0.00 4.20
5162 6420 0.529555 GATCTCGCTTGGCCAGAGAC 60.530 60.000 21.80 13.56 42.87 3.36
5163 6421 0.972471 TGATCTCGCTTGGCCAGAGA 60.972 55.000 21.66 21.66 44.00 3.10
5164 6422 0.530211 CTGATCTCGCTTGGCCAGAG 60.530 60.000 13.12 13.12 0.00 3.35
5165 6423 1.260538 ACTGATCTCGCTTGGCCAGA 61.261 55.000 5.11 0.00 0.00 3.86
5185 6469 4.510711 CACTGACTGATTCATGCATCTACC 59.489 45.833 6.89 0.00 32.17 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.