Multiple sequence alignment - TraesCS4A01G109900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G109900 chr4A 100.000 4186 0 0 1413 5598 133456744 133452559 0.000000e+00 7731
1 TraesCS4A01G109900 chr4A 100.000 1096 0 0 1 1096 133458156 133457061 0.000000e+00 2025
2 TraesCS4A01G109900 chr4A 88.555 533 49 7 1 530 133467450 133466927 2.200000e-178 636
3 TraesCS4A01G109900 chr4A 87.054 533 56 9 1 530 133472073 133471551 1.740000e-164 590
4 TraesCS4A01G109900 chr4A 85.841 565 57 15 1 562 133469756 133469212 3.760000e-161 579
5 TraesCS4A01G109900 chr4A 85.741 533 64 8 1 530 133465138 133464615 2.280000e-153 553
6 TraesCS4A01G109900 chr4A 80.753 239 33 7 5096 5322 345205700 345205463 2.070000e-39 174
7 TraesCS4A01G109900 chr4D 93.312 3753 166 34 1454 5160 338823370 338827083 0.000000e+00 5461
8 TraesCS4A01G109900 chr4D 92.455 1100 67 10 1 1091 338822128 338823220 0.000000e+00 1557
9 TraesCS4A01G109900 chr4D 87.992 533 52 8 1 530 338817494 338818017 2.220000e-173 619
10 TraesCS4A01G109900 chr4D 86.348 564 55 12 1 562 338819830 338820373 3.730000e-166 595
11 TraesCS4A01G109900 chr4D 80.477 461 56 20 5155 5591 338833318 338833768 7.000000e-84 322
12 TraesCS4A01G109900 chr4B 92.593 3510 137 51 1413 4843 417738094 417741559 0.000000e+00 4927
13 TraesCS4A01G109900 chr4B 92.308 1092 73 8 4 1091 417736884 417737968 0.000000e+00 1541
14 TraesCS4A01G109900 chr4B 86.940 536 51 12 1 530 417732533 417733055 8.080000e-163 584
15 TraesCS4A01G109900 chr5A 82.831 332 43 5 4094 4414 504715212 504714884 9.180000e-73 285
16 TraesCS4A01G109900 chr5A 81.786 280 36 10 5055 5321 412105511 412105234 2.630000e-53 220
17 TraesCS4A01G109900 chr5A 83.529 170 24 3 5052 5218 419692038 419692206 7.510000e-34 156
18 TraesCS4A01G109900 chr7A 80.892 314 44 11 5021 5320 148252422 148252111 3.370000e-57 233
19 TraesCS4A01G109900 chr7A 80.328 305 41 13 5031 5321 663527138 663527437 4.390000e-51 213
20 TraesCS4A01G109900 chr6A 81.250 304 42 9 5030 5320 155252262 155251961 1.210000e-56 231
21 TraesCS4A01G109900 chr1B 80.456 307 45 9 5025 5318 252324906 252324602 2.630000e-53 220
22 TraesCS4A01G109900 chr3D 79.495 317 51 8 5016 5320 531702093 531701779 4.390000e-51 213
23 TraesCS4A01G109900 chr5D 79.495 317 50 9 5017 5320 335786606 335786292 1.580000e-50 211
24 TraesCS4A01G109900 chr6D 79.487 312 48 11 5024 5321 413046102 413046411 2.040000e-49 207
25 TraesCS4A01G109900 chr2B 77.097 310 56 9 5025 5321 679888916 679889223 1.250000e-36 165


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G109900 chr4A 133452559 133458156 5597 True 4878.000000 7731 100.000000 1 5598 2 chr4A.!!$R2 5597
1 TraesCS4A01G109900 chr4A 133464615 133472073 7458 True 589.500000 636 86.797750 1 562 4 chr4A.!!$R3 561
2 TraesCS4A01G109900 chr4D 338817494 338827083 9589 False 2058.000000 5461 90.026750 1 5160 4 chr4D.!!$F2 5159
3 TraesCS4A01G109900 chr4B 417732533 417741559 9026 False 2350.666667 4927 90.613667 1 4843 3 chr4B.!!$F1 4842

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
467 5119 0.890542 TTGGCTGCATCAGAAAGCGT 60.891 50.000 0.5 0.0 37.83 5.07 F
1646 8647 0.322187 TCTTCGTTAAGCCCAAGCCC 60.322 55.000 0.0 0.0 41.25 5.19 F
2114 9115 1.150536 TTTCGGTTTCCAGCAGCCT 59.849 52.632 0.0 0.0 0.00 4.58 F
3123 10127 0.251354 GCTCAAGCCTCAGGACATCA 59.749 55.000 0.0 0.0 34.31 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2173 9174 0.407139 AAGAAGCAGCAGGGATGGTT 59.593 50.0 0.00 0.0 42.28 3.67 R
2849 9850 0.385974 CAAACTTCTTGGCGGCTTCG 60.386 55.0 11.43 0.0 0.00 3.79 R
3500 10506 0.771755 GGAACTCCTCCTTGTTGGGT 59.228 55.0 0.00 0.0 41.61 4.51 R
4997 12091 0.110419 TGGCGAATGCGAAACGAAAG 60.110 50.0 0.00 0.0 44.10 2.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.358152 TCCGTCTCCCTTTGGATTGT 58.642 50.000 0.00 0.00 40.80 2.71
22 23 1.739067 GTCTCCCTTTGGATTGTCGG 58.261 55.000 0.00 0.00 40.80 4.79
40 41 1.076923 GTCCACTCCCCTCGCTCTA 60.077 63.158 0.00 0.00 0.00 2.43
88 90 2.830285 GCAACGACACCAACCGCTT 61.830 57.895 0.00 0.00 0.00 4.68
120 4770 1.591327 GGTTGCTGCACCAAAACCG 60.591 57.895 0.00 0.00 36.73 4.44
141 4791 1.212751 GGCAGCGCCGAAGAATTTT 59.787 52.632 2.29 0.00 39.62 1.82
192 4842 6.224584 AGAACTCTTGTTTCTTACACCTAGC 58.775 40.000 0.00 0.00 36.21 3.42
218 4868 8.953990 CGAACAATTTGTTTCTGTTTAAGGTAG 58.046 33.333 15.54 0.00 41.28 3.18
283 4935 3.064958 GGAAATAAGCCAAACTACGGAGC 59.935 47.826 0.00 0.00 0.00 4.70
292 4944 5.883673 AGCCAAACTACGGAGCAATAATAAA 59.116 36.000 0.00 0.00 0.00 1.40
293 4945 6.038271 AGCCAAACTACGGAGCAATAATAAAG 59.962 38.462 0.00 0.00 0.00 1.85
296 4948 8.333186 CCAAACTACGGAGCAATAATAAAGTAC 58.667 37.037 0.00 0.00 0.00 2.73
321 4973 7.119262 ACAGTAGTTAGCACAATTAATCACCAC 59.881 37.037 0.00 0.00 0.00 4.16
329 4981 7.709947 AGCACAATTAATCACCACATTGATAG 58.290 34.615 0.00 0.00 35.02 2.08
333 4985 9.905713 ACAATTAATCACCACATTGATAGTAGT 57.094 29.630 0.00 0.00 35.02 2.73
360 5012 8.443953 ACATTTTTCCGAAATTGATTTCCAAA 57.556 26.923 10.06 7.25 42.34 3.28
417 5069 4.836825 TCAAAGATGCTAGGAGTGAAAGG 58.163 43.478 0.00 0.00 0.00 3.11
418 5070 3.922171 AAGATGCTAGGAGTGAAAGGG 57.078 47.619 0.00 0.00 0.00 3.95
467 5119 0.890542 TTGGCTGCATCAGAAAGCGT 60.891 50.000 0.50 0.00 37.83 5.07
509 5161 9.736023 GAAATGAACATCCCTGAATATGTTAAC 57.264 33.333 0.00 0.00 44.27 2.01
542 7532 4.262891 TGCTCCCAAATCCCAATAATGA 57.737 40.909 0.00 0.00 0.00 2.57
543 7533 4.818447 TGCTCCCAAATCCCAATAATGAT 58.182 39.130 0.00 0.00 0.00 2.45
567 7557 3.423749 TGTTTGCATCATCCATCACACT 58.576 40.909 0.00 0.00 0.00 3.55
944 7934 3.122297 GCATCATTCACTCTCTCCTTCG 58.878 50.000 0.00 0.00 0.00 3.79
951 7941 3.078097 TCACTCTCTCCTTCGTCTTCAG 58.922 50.000 0.00 0.00 0.00 3.02
1440 8430 5.534407 TGTGTACATACATATACCTTGCCG 58.466 41.667 0.00 0.00 38.63 5.69
1468 8458 0.601841 TCAACTCGCCGGAAAGAACC 60.602 55.000 5.05 0.00 0.00 3.62
1469 8459 0.602905 CAACTCGCCGGAAAGAACCT 60.603 55.000 5.05 0.00 0.00 3.50
1493 8488 2.372172 ACAGGATCGTCCCAGAGTTTTT 59.628 45.455 1.06 0.00 37.19 1.94
1534 8529 4.094294 TCTTGTTTCTGTTTTGTCCTCGTG 59.906 41.667 0.00 0.00 0.00 4.35
1536 8531 3.621268 TGTTTCTGTTTTGTCCTCGTGAG 59.379 43.478 0.00 0.00 0.00 3.51
1593 8588 3.998341 CCCGGAAAGAATCGAACAGTAAA 59.002 43.478 0.73 0.00 0.00 2.01
1641 8642 2.253610 TCTTCCTCTTCGTTAAGCCCA 58.746 47.619 0.00 0.00 32.36 5.36
1642 8643 2.635915 TCTTCCTCTTCGTTAAGCCCAA 59.364 45.455 0.00 0.00 32.36 4.12
1643 8644 2.762535 TCCTCTTCGTTAAGCCCAAG 57.237 50.000 0.00 0.00 32.36 3.61
1644 8645 1.087501 CCTCTTCGTTAAGCCCAAGC 58.912 55.000 0.00 0.00 40.32 4.01
1645 8646 1.087501 CTCTTCGTTAAGCCCAAGCC 58.912 55.000 0.00 0.00 41.25 4.35
1646 8647 0.322187 TCTTCGTTAAGCCCAAGCCC 60.322 55.000 0.00 0.00 41.25 5.19
1647 8648 1.303806 TTCGTTAAGCCCAAGCCCC 60.304 57.895 0.00 0.00 41.25 5.80
1648 8649 2.754254 CGTTAAGCCCAAGCCCCC 60.754 66.667 0.00 0.00 41.25 5.40
1649 8650 2.443324 GTTAAGCCCAAGCCCCCA 59.557 61.111 0.00 0.00 41.25 4.96
1650 8651 1.682344 GTTAAGCCCAAGCCCCCAG 60.682 63.158 0.00 0.00 41.25 4.45
1921 8922 2.844451 TTTGCCACGTCCTGCAAGC 61.844 57.895 14.13 0.00 46.99 4.01
1951 8952 2.223735 TGTTCTCCATCGCCTATCGTTC 60.224 50.000 0.00 0.00 39.67 3.95
2114 9115 1.150536 TTTCGGTTTCCAGCAGCCT 59.849 52.632 0.00 0.00 0.00 4.58
2123 9124 2.348411 TCCAGCAGCCTAATTTAGCC 57.652 50.000 0.00 0.00 0.00 3.93
2149 9150 4.032900 GCAATTGCAATGAAATGAGCTCAG 59.967 41.667 25.36 7.54 41.59 3.35
2173 9174 5.316167 AGACAAAACTGAATACTGATGCCA 58.684 37.500 0.00 0.00 0.00 4.92
2189 9190 1.304713 CCAACCATCCCTGCTGCTT 60.305 57.895 0.00 0.00 0.00 3.91
2391 9392 2.696989 TGTCGCCACAGATTCATCAT 57.303 45.000 0.00 0.00 0.00 2.45
2395 9396 1.600957 CGCCACAGATTCATCATGTCC 59.399 52.381 0.00 0.00 0.00 4.02
2415 9416 1.659098 CGGACTGCGACTTATTTGTCC 59.341 52.381 0.00 0.00 40.16 4.02
2563 9564 1.746322 TACAACCCGCAGTGGTTCGA 61.746 55.000 0.00 0.00 45.51 3.71
2674 9675 1.394917 CCACGTGATACTTGCTTCTGC 59.605 52.381 19.30 0.00 40.20 4.26
2709 9710 1.664965 GACGGTGACTGACAGTGGC 60.665 63.158 14.14 5.15 32.52 5.01
2822 9823 3.997400 CTCCTCCCTCGTCGCCTCA 62.997 68.421 0.00 0.00 0.00 3.86
2825 9826 2.750637 TCCCTCGTCGCCTCAGTC 60.751 66.667 0.00 0.00 0.00 3.51
2849 9850 1.663074 GCGCCATCTCATCGAGACC 60.663 63.158 0.00 0.00 41.76 3.85
2963 9967 6.094186 ACTGTTTCTTCTTCTTCAAGAACCAC 59.906 38.462 0.00 0.00 42.66 4.16
3008 10012 2.511373 TGCGCATTGTAGGGCTCG 60.511 61.111 5.66 0.00 46.41 5.03
3123 10127 0.251354 GCTCAAGCCTCAGGACATCA 59.749 55.000 0.00 0.00 34.31 3.07
3130 10134 1.893544 CCTCAGGACATCATGATGCC 58.106 55.000 31.17 29.30 42.39 4.40
3209 10215 7.112779 ACAACCCCACAAATTTGATTAAAACA 58.887 30.769 24.64 0.00 0.00 2.83
3210 10216 7.281999 ACAACCCCACAAATTTGATTAAAACAG 59.718 33.333 24.64 8.69 0.00 3.16
3234 10240 3.285484 AGCCTTAAGACATCTTGGCATG 58.715 45.455 19.63 0.00 43.54 4.06
3261 10267 8.316640 AGTAAATGAAAAAGACTGCTCACTAG 57.683 34.615 0.00 0.00 0.00 2.57
3383 10389 2.212983 CGACGTGACGACCATACGC 61.213 63.158 13.70 0.00 41.19 4.42
3449 10455 1.282157 GGGGTTAAGATGGTGCTGTCT 59.718 52.381 0.00 0.00 0.00 3.41
3500 10506 1.629043 ACCTCTACTTCCACTTCGCA 58.371 50.000 0.00 0.00 0.00 5.10
3503 10509 0.606604 TCTACTTCCACTTCGCACCC 59.393 55.000 0.00 0.00 0.00 4.61
3780 10788 1.221840 CATGGACCCCGAGTGGAAG 59.778 63.158 0.00 0.00 37.49 3.46
3820 10846 4.207891 TCTCTGCCATAAAGTTCAGGTC 57.792 45.455 0.00 0.00 0.00 3.85
3835 10861 7.158099 AGTTCAGGTCTGTTATATTTTTGCC 57.842 36.000 0.00 0.00 0.00 4.52
3854 10888 4.138290 TGCCCTGAATTTTCTGACGTTTA 58.862 39.130 0.00 0.00 0.00 2.01
3862 10896 6.470877 TGAATTTTCTGACGTTTACTTGTTGC 59.529 34.615 0.00 0.00 0.00 4.17
3957 11000 0.912486 GGAGCCAAGGGTACAGACAT 59.088 55.000 0.00 0.00 0.00 3.06
3992 11035 9.730705 TTGAGTTTTTCAGAAGATCAGATATGT 57.269 29.630 0.00 0.00 37.07 2.29
4154 11218 3.443037 GTGACTGACGAGATGATGAAGG 58.557 50.000 0.00 0.00 0.00 3.46
4155 11219 2.428530 TGACTGACGAGATGATGAAGGG 59.571 50.000 0.00 0.00 0.00 3.95
4183 11247 1.475682 GAGGAGTACCCCTACAACACG 59.524 57.143 0.00 0.00 36.49 4.49
4187 11251 2.648143 TACCCCTACAACACGCCCG 61.648 63.158 0.00 0.00 0.00 6.13
4198 11262 1.890041 CACGCCCGTCAACAAGGAA 60.890 57.895 0.00 0.00 0.00 3.36
4201 11265 1.896660 GCCCGTCAACAAGGAAGCA 60.897 57.895 0.00 0.00 0.00 3.91
4251 11315 4.941609 CCCTCAGGTGACCGATTG 57.058 61.111 0.00 0.00 0.00 2.67
4259 11326 2.932614 CAGGTGACCGATTGATTCAGAC 59.067 50.000 0.00 0.00 0.00 3.51
4264 11331 4.269603 GTGACCGATTGATTCAGACAGATG 59.730 45.833 0.00 0.00 0.00 2.90
4326 11401 2.162208 ACTGACGTGCAAGGCATAAATG 59.838 45.455 9.15 0.00 41.91 2.32
4627 11711 2.214181 CTGGTTCGTAGGAGCGTGCT 62.214 60.000 0.00 0.00 0.00 4.40
4658 11742 1.257750 CGTGTCCTGGGACTGATGGA 61.258 60.000 18.92 0.00 44.80 3.41
4659 11743 1.207791 GTGTCCTGGGACTGATGGAT 58.792 55.000 18.92 0.00 44.80 3.41
4660 11744 1.134280 GTGTCCTGGGACTGATGGATG 60.134 57.143 18.92 0.00 44.80 3.51
4661 11745 0.471617 GTCCTGGGACTGATGGATGG 59.528 60.000 12.09 0.00 41.57 3.51
4709 11795 2.287915 GTGCTGTTGTTGTGTACTCCTG 59.712 50.000 0.00 0.00 0.00 3.86
4848 11941 9.251440 AGTGAACTAGTATGGTGTACTATTGAA 57.749 33.333 0.00 0.00 27.78 2.69
4849 11942 9.865321 GTGAACTAGTATGGTGTACTATTGAAA 57.135 33.333 0.00 0.00 30.57 2.69
4885 11978 4.438744 CCGCCTTATGTTTCCTCAAATGTC 60.439 45.833 0.00 0.00 0.00 3.06
4909 12003 3.541711 CCGTTCTTTTCTTGTTGTAGCG 58.458 45.455 0.00 0.00 0.00 4.26
4911 12005 3.545228 CGTTCTTTTCTTGTTGTAGCGCA 60.545 43.478 11.47 0.00 0.00 6.09
4918 12012 2.416202 TCTTGTTGTAGCGCATGATGTG 59.584 45.455 11.47 0.77 0.00 3.21
4958 12052 1.625818 ACTCTTCGCTCCTGAAACCAT 59.374 47.619 0.00 0.00 0.00 3.55
4959 12053 2.275318 CTCTTCGCTCCTGAAACCATC 58.725 52.381 0.00 0.00 0.00 3.51
4963 12057 1.002366 CGCTCCTGAAACCATCTTCG 58.998 55.000 0.00 0.00 0.00 3.79
4997 12091 3.372660 TTTTGCCATAACCGAAACCAC 57.627 42.857 0.00 0.00 0.00 4.16
5023 12117 3.545873 CGTTTCGCATTCGCCAAAATAAT 59.454 39.130 0.00 0.00 35.26 1.28
5028 12122 2.796593 GCATTCGCCAAAATAATGCCTC 59.203 45.455 7.81 0.00 46.19 4.70
5039 12133 6.229733 CAAAATAATGCCTCCTTTGGTTTGA 58.770 36.000 0.00 0.00 0.00 2.69
5040 12134 6.432403 AAATAATGCCTCCTTTGGTTTGAA 57.568 33.333 0.00 0.00 0.00 2.69
5042 12136 1.703411 TGCCTCCTTTGGTTTGAAGG 58.297 50.000 0.00 0.00 44.06 3.46
5050 12144 5.391312 CCTTTGGTTTGAAGGAATTCGAT 57.609 39.130 0.00 0.00 45.25 3.59
5121 12215 7.121907 AGCTCTTTGGTTTGAAGGAATAGAATC 59.878 37.037 0.00 0.00 0.00 2.52
5257 12351 9.716531 ATTCATACGATTTGAGATACATGTCAT 57.283 29.630 0.00 0.00 29.66 3.06
5258 12352 8.748380 TCATACGATTTGAGATACATGTCATC 57.252 34.615 0.00 4.47 29.66 2.92
5259 12353 8.579863 TCATACGATTTGAGATACATGTCATCT 58.420 33.333 0.00 9.42 35.43 2.90
5260 12354 8.858186 CATACGATTTGAGATACATGTCATCTC 58.142 37.037 24.04 24.04 45.76 2.75
5269 12363 8.618702 GAGATACATGTCATCTCATTTTCCAT 57.381 34.615 24.95 4.69 45.17 3.41
5270 12364 8.392372 AGATACATGTCATCTCATTTTCCATG 57.608 34.615 0.00 0.00 35.52 3.66
5271 12365 7.997223 AGATACATGTCATCTCATTTTCCATGT 59.003 33.333 0.00 0.00 42.69 3.21
5272 12366 9.276590 GATACATGTCATCTCATTTTCCATGTA 57.723 33.333 0.00 10.80 43.99 2.29
5273 12367 9.803507 ATACATGTCATCTCATTTTCCATGTAT 57.196 29.630 0.00 13.67 43.89 2.29
5274 12368 8.529424 ACATGTCATCTCATTTTCCATGTATT 57.471 30.769 0.00 0.00 39.51 1.89
5275 12369 8.974238 ACATGTCATCTCATTTTCCATGTATTT 58.026 29.630 0.00 0.00 39.51 1.40
5276 12370 9.811995 CATGTCATCTCATTTTCCATGTATTTT 57.188 29.630 0.00 0.00 0.00 1.82
5278 12372 9.246670 TGTCATCTCATTTTCCATGTATTTTCT 57.753 29.630 0.00 0.00 0.00 2.52
5279 12373 9.512435 GTCATCTCATTTTCCATGTATTTTCTG 57.488 33.333 0.00 0.00 0.00 3.02
5280 12374 9.246670 TCATCTCATTTTCCATGTATTTTCTGT 57.753 29.630 0.00 0.00 0.00 3.41
5281 12375 9.865321 CATCTCATTTTCCATGTATTTTCTGTT 57.135 29.630 0.00 0.00 0.00 3.16
5313 12407 8.986929 ATTTTCTACCCTATGAATGAAAGGAG 57.013 34.615 0.00 0.00 31.64 3.69
5314 12408 6.500589 TTCTACCCTATGAATGAAAGGAGG 57.499 41.667 0.00 0.00 31.64 4.30
5315 12409 3.584733 ACCCTATGAATGAAAGGAGGC 57.415 47.619 0.00 0.00 31.64 4.70
5316 12410 2.175715 ACCCTATGAATGAAAGGAGGCC 59.824 50.000 0.00 0.00 31.64 5.19
5317 12411 2.444766 CCCTATGAATGAAAGGAGGCCT 59.555 50.000 3.86 3.86 33.87 5.19
5318 12412 3.652869 CCCTATGAATGAAAGGAGGCCTA 59.347 47.826 4.42 0.00 31.13 3.93
5319 12413 4.104738 CCCTATGAATGAAAGGAGGCCTAA 59.895 45.833 4.42 0.00 31.13 2.69
5320 12414 5.399038 CCCTATGAATGAAAGGAGGCCTAAA 60.399 44.000 4.42 0.00 31.13 1.85
5321 12415 6.310149 CCTATGAATGAAAGGAGGCCTAAAT 58.690 40.000 4.42 0.00 31.13 1.40
5322 12416 6.208204 CCTATGAATGAAAGGAGGCCTAAATG 59.792 42.308 4.42 0.00 31.13 2.32
5323 12417 3.701040 TGAATGAAAGGAGGCCTAAATGC 59.299 43.478 4.42 0.00 31.13 3.56
5324 12418 2.897271 TGAAAGGAGGCCTAAATGCA 57.103 45.000 4.42 0.00 31.13 3.96
5325 12419 2.446435 TGAAAGGAGGCCTAAATGCAC 58.554 47.619 4.42 0.00 31.13 4.57
5326 12420 1.751351 GAAAGGAGGCCTAAATGCACC 59.249 52.381 4.42 0.00 31.13 5.01
5327 12421 0.704076 AAGGAGGCCTAAATGCACCA 59.296 50.000 4.42 0.00 31.13 4.17
5328 12422 0.257039 AGGAGGCCTAAATGCACCAG 59.743 55.000 4.42 0.00 33.62 4.00
5329 12423 0.255890 GGAGGCCTAAATGCACCAGA 59.744 55.000 4.42 0.00 32.21 3.86
5330 12424 1.383523 GAGGCCTAAATGCACCAGAC 58.616 55.000 4.42 0.00 0.00 3.51
5331 12425 0.698238 AGGCCTAAATGCACCAGACA 59.302 50.000 1.29 0.00 0.00 3.41
5332 12426 0.811281 GGCCTAAATGCACCAGACAC 59.189 55.000 0.00 0.00 0.00 3.67
5333 12427 1.614317 GGCCTAAATGCACCAGACACT 60.614 52.381 0.00 0.00 0.00 3.55
5334 12428 1.740025 GCCTAAATGCACCAGACACTC 59.260 52.381 0.00 0.00 0.00 3.51
5335 12429 2.616510 GCCTAAATGCACCAGACACTCT 60.617 50.000 0.00 0.00 0.00 3.24
5336 12430 3.679389 CCTAAATGCACCAGACACTCTT 58.321 45.455 0.00 0.00 0.00 2.85
5337 12431 3.686726 CCTAAATGCACCAGACACTCTTC 59.313 47.826 0.00 0.00 0.00 2.87
5338 12432 2.936919 AATGCACCAGACACTCTTCA 57.063 45.000 0.00 0.00 0.00 3.02
5339 12433 2.469274 ATGCACCAGACACTCTTCAG 57.531 50.000 0.00 0.00 0.00 3.02
5340 12434 1.413118 TGCACCAGACACTCTTCAGA 58.587 50.000 0.00 0.00 0.00 3.27
5341 12435 1.762370 TGCACCAGACACTCTTCAGAA 59.238 47.619 0.00 0.00 0.00 3.02
5342 12436 2.170397 TGCACCAGACACTCTTCAGAAA 59.830 45.455 0.00 0.00 0.00 2.52
5343 12437 3.181451 TGCACCAGACACTCTTCAGAAAT 60.181 43.478 0.00 0.00 0.00 2.17
5344 12438 3.817647 GCACCAGACACTCTTCAGAAATT 59.182 43.478 0.00 0.00 0.00 1.82
5345 12439 4.083590 GCACCAGACACTCTTCAGAAATTC 60.084 45.833 0.00 0.00 0.00 2.17
5346 12440 5.059161 CACCAGACACTCTTCAGAAATTCA 58.941 41.667 0.00 0.00 0.00 2.57
5347 12441 5.178996 CACCAGACACTCTTCAGAAATTCAG 59.821 44.000 0.00 0.00 0.00 3.02
5348 12442 5.070981 ACCAGACACTCTTCAGAAATTCAGA 59.929 40.000 0.00 0.00 0.00 3.27
5349 12443 5.994054 CCAGACACTCTTCAGAAATTCAGAA 59.006 40.000 1.03 1.03 0.00 3.02
5350 12444 6.073331 CCAGACACTCTTCAGAAATTCAGAAC 60.073 42.308 0.00 0.00 0.00 3.01
5351 12445 6.705381 CAGACACTCTTCAGAAATTCAGAACT 59.295 38.462 0.00 0.00 0.00 3.01
5352 12446 6.705381 AGACACTCTTCAGAAATTCAGAACTG 59.295 38.462 0.00 0.00 0.00 3.16
5353 12447 5.762218 ACACTCTTCAGAAATTCAGAACTGG 59.238 40.000 0.00 0.00 0.00 4.00
5354 12448 5.994054 CACTCTTCAGAAATTCAGAACTGGA 59.006 40.000 0.00 0.00 0.00 3.86
5355 12449 6.654161 CACTCTTCAGAAATTCAGAACTGGAT 59.346 38.462 0.00 0.00 0.00 3.41
5356 12450 7.174599 CACTCTTCAGAAATTCAGAACTGGATT 59.825 37.037 2.81 2.81 40.37 3.01
5358 12452 7.879070 TCTTCAGAAATTCAGAACTGGATTTG 58.121 34.615 21.20 11.69 45.93 2.32
5359 12453 6.579666 TCAGAAATTCAGAACTGGATTTGG 57.420 37.500 21.20 14.45 45.93 3.28
5360 12454 5.477984 TCAGAAATTCAGAACTGGATTTGGG 59.522 40.000 21.20 14.18 45.93 4.12
5361 12455 5.244626 CAGAAATTCAGAACTGGATTTGGGT 59.755 40.000 21.20 7.13 45.93 4.51
5362 12456 5.244626 AGAAATTCAGAACTGGATTTGGGTG 59.755 40.000 21.20 0.00 45.93 4.61
5363 12457 3.593442 TTCAGAACTGGATTTGGGTGT 57.407 42.857 1.93 0.00 0.00 4.16
5364 12458 2.862541 TCAGAACTGGATTTGGGTGTG 58.137 47.619 1.93 0.00 0.00 3.82
5365 12459 1.270550 CAGAACTGGATTTGGGTGTGC 59.729 52.381 0.00 0.00 0.00 4.57
5366 12460 1.133513 AGAACTGGATTTGGGTGTGCA 60.134 47.619 0.00 0.00 0.00 4.57
5367 12461 1.686052 GAACTGGATTTGGGTGTGCAA 59.314 47.619 0.00 0.00 0.00 4.08
5368 12462 1.331214 ACTGGATTTGGGTGTGCAAG 58.669 50.000 0.00 0.00 0.00 4.01
5369 12463 1.331214 CTGGATTTGGGTGTGCAAGT 58.669 50.000 0.00 0.00 0.00 3.16
5370 12464 1.000060 CTGGATTTGGGTGTGCAAGTG 60.000 52.381 0.00 0.00 0.00 3.16
5371 12465 0.319813 GGATTTGGGTGTGCAAGTGC 60.320 55.000 0.00 0.00 42.50 4.40
5372 12466 0.319813 GATTTGGGTGTGCAAGTGCC 60.320 55.000 0.00 0.00 41.18 5.01
5373 12467 0.760189 ATTTGGGTGTGCAAGTGCCT 60.760 50.000 0.00 0.00 41.18 4.75
5374 12468 0.975040 TTTGGGTGTGCAAGTGCCTT 60.975 50.000 0.00 0.00 41.18 4.35
5375 12469 0.106469 TTGGGTGTGCAAGTGCCTTA 60.106 50.000 0.00 0.00 41.18 2.69
5376 12470 0.112218 TGGGTGTGCAAGTGCCTTAT 59.888 50.000 0.00 0.00 41.18 1.73
5377 12471 0.527565 GGGTGTGCAAGTGCCTTATG 59.472 55.000 0.00 0.00 41.18 1.90
5378 12472 1.247567 GGTGTGCAAGTGCCTTATGT 58.752 50.000 0.00 0.00 41.18 2.29
5379 12473 1.068333 GGTGTGCAAGTGCCTTATGTG 60.068 52.381 0.00 0.00 41.18 3.21
5380 12474 0.597568 TGTGCAAGTGCCTTATGTGC 59.402 50.000 0.00 0.00 41.18 4.57
5381 12475 0.454957 GTGCAAGTGCCTTATGTGCG 60.455 55.000 0.00 0.00 41.18 5.34
5382 12476 1.137404 GCAAGTGCCTTATGTGCGG 59.863 57.895 0.00 0.00 34.31 5.69
5383 12477 1.802636 CAAGTGCCTTATGTGCGGG 59.197 57.895 0.00 0.00 0.00 6.13
5384 12478 0.960364 CAAGTGCCTTATGTGCGGGT 60.960 55.000 0.00 0.00 0.00 5.28
5385 12479 0.616371 AAGTGCCTTATGTGCGGGTA 59.384 50.000 0.00 0.00 0.00 3.69
5386 12480 0.837272 AGTGCCTTATGTGCGGGTAT 59.163 50.000 0.00 0.00 0.00 2.73
5387 12481 1.211949 AGTGCCTTATGTGCGGGTATT 59.788 47.619 0.00 0.00 0.00 1.89
5388 12482 2.436542 AGTGCCTTATGTGCGGGTATTA 59.563 45.455 0.00 0.00 0.00 0.98
5389 12483 3.072476 AGTGCCTTATGTGCGGGTATTAT 59.928 43.478 0.00 0.00 0.00 1.28
5390 12484 3.818773 GTGCCTTATGTGCGGGTATTATT 59.181 43.478 0.00 0.00 0.00 1.40
5391 12485 4.277423 GTGCCTTATGTGCGGGTATTATTT 59.723 41.667 0.00 0.00 0.00 1.40
5392 12486 5.470777 GTGCCTTATGTGCGGGTATTATTTA 59.529 40.000 0.00 0.00 0.00 1.40
5393 12487 5.703592 TGCCTTATGTGCGGGTATTATTTAG 59.296 40.000 0.00 0.00 0.00 1.85
5394 12488 5.935789 GCCTTATGTGCGGGTATTATTTAGA 59.064 40.000 0.00 0.00 0.00 2.10
5395 12489 6.428771 GCCTTATGTGCGGGTATTATTTAGAA 59.571 38.462 0.00 0.00 0.00 2.10
5396 12490 7.120726 GCCTTATGTGCGGGTATTATTTAGAAT 59.879 37.037 0.00 0.00 0.00 2.40
5397 12491 8.665685 CCTTATGTGCGGGTATTATTTAGAATC 58.334 37.037 0.00 0.00 0.00 2.52
5398 12492 9.214957 CTTATGTGCGGGTATTATTTAGAATCA 57.785 33.333 0.00 0.00 0.00 2.57
5399 12493 9.733556 TTATGTGCGGGTATTATTTAGAATCAT 57.266 29.630 0.00 0.00 0.00 2.45
5400 12494 7.433708 TGTGCGGGTATTATTTAGAATCATG 57.566 36.000 0.00 0.00 0.00 3.07
5401 12495 6.072728 TGTGCGGGTATTATTTAGAATCATGC 60.073 38.462 0.00 0.00 0.00 4.06
5402 12496 5.414454 TGCGGGTATTATTTAGAATCATGCC 59.586 40.000 0.00 0.00 0.00 4.40
5403 12497 5.648092 GCGGGTATTATTTAGAATCATGCCT 59.352 40.000 0.00 0.00 0.00 4.75
5404 12498 6.183360 GCGGGTATTATTTAGAATCATGCCTC 60.183 42.308 0.00 0.00 0.00 4.70
5405 12499 6.878923 CGGGTATTATTTAGAATCATGCCTCA 59.121 38.462 0.00 0.00 0.00 3.86
5406 12500 7.554118 CGGGTATTATTTAGAATCATGCCTCAT 59.446 37.037 0.00 0.00 0.00 2.90
5407 12501 8.680903 GGGTATTATTTAGAATCATGCCTCATG 58.319 37.037 0.59 0.59 42.60 3.07
5408 12502 9.236006 GGTATTATTTAGAATCATGCCTCATGT 57.764 33.333 6.68 0.00 41.98 3.21
5410 12504 4.906065 TTTAGAATCATGCCTCATGTGC 57.094 40.909 6.68 0.00 41.98 4.57
5411 12505 2.430248 AGAATCATGCCTCATGTGCA 57.570 45.000 13.54 13.54 41.98 4.57
5418 12512 1.753930 TGCCTCATGTGCATACAAGG 58.246 50.000 8.30 8.20 40.84 3.61
5419 12513 1.281577 TGCCTCATGTGCATACAAGGA 59.718 47.619 14.85 0.87 40.84 3.36
5420 12514 1.945394 GCCTCATGTGCATACAAGGAG 59.055 52.381 14.85 8.93 40.84 3.69
5421 12515 2.681976 GCCTCATGTGCATACAAGGAGT 60.682 50.000 14.85 0.00 40.84 3.85
5422 12516 2.941064 CCTCATGTGCATACAAGGAGTG 59.059 50.000 7.04 0.00 40.84 3.51
5423 12517 2.353889 CTCATGTGCATACAAGGAGTGC 59.646 50.000 0.00 0.00 40.84 4.40
5424 12518 2.026915 TCATGTGCATACAAGGAGTGCT 60.027 45.455 0.00 0.00 40.84 4.40
5425 12519 2.099141 TGTGCATACAAGGAGTGCTC 57.901 50.000 0.00 0.00 39.52 4.26
5426 12520 2.681976 ATGTGCATACAAGGAGTGCTCC 60.682 50.000 10.12 10.12 43.44 4.70
5435 12529 1.365633 GGAGTGCTCCTATCCAGCG 59.634 63.158 10.80 0.00 46.16 5.18
5436 12530 1.300542 GAGTGCTCCTATCCAGCGC 60.301 63.158 0.00 0.00 45.98 5.92
5437 12531 2.280457 GTGCTCCTATCCAGCGCC 60.280 66.667 2.29 0.00 40.83 6.53
5438 12532 2.444706 TGCTCCTATCCAGCGCCT 60.445 61.111 2.29 0.00 40.01 5.52
5439 12533 2.066393 TGCTCCTATCCAGCGCCTT 61.066 57.895 2.29 0.00 40.01 4.35
5440 12534 1.301322 GCTCCTATCCAGCGCCTTC 60.301 63.158 2.29 0.00 0.00 3.46
5441 12535 1.369321 CTCCTATCCAGCGCCTTCC 59.631 63.158 2.29 0.00 0.00 3.46
5442 12536 2.029666 CCTATCCAGCGCCTTCCG 59.970 66.667 2.29 0.00 40.75 4.30
5443 12537 2.797278 CCTATCCAGCGCCTTCCGT 61.797 63.158 2.29 0.00 39.71 4.69
5444 12538 1.592669 CTATCCAGCGCCTTCCGTG 60.593 63.158 2.29 0.00 39.71 4.94
5452 12546 3.306206 CGCCTTCCGTGCAAATAAC 57.694 52.632 0.00 0.00 0.00 1.89
5453 12547 0.802494 CGCCTTCCGTGCAAATAACT 59.198 50.000 0.00 0.00 0.00 2.24
5454 12548 1.465689 CGCCTTCCGTGCAAATAACTG 60.466 52.381 0.00 0.00 0.00 3.16
5455 12549 1.810151 GCCTTCCGTGCAAATAACTGA 59.190 47.619 0.00 0.00 0.00 3.41
5456 12550 2.414161 GCCTTCCGTGCAAATAACTGAC 60.414 50.000 0.00 0.00 0.00 3.51
5457 12551 3.074412 CCTTCCGTGCAAATAACTGACT 58.926 45.455 0.00 0.00 0.00 3.41
5458 12552 4.250464 CCTTCCGTGCAAATAACTGACTA 58.750 43.478 0.00 0.00 0.00 2.59
5459 12553 4.092968 CCTTCCGTGCAAATAACTGACTAC 59.907 45.833 0.00 0.00 0.00 2.73
5460 12554 4.260139 TCCGTGCAAATAACTGACTACA 57.740 40.909 0.00 0.00 0.00 2.74
5461 12555 4.633175 TCCGTGCAAATAACTGACTACAA 58.367 39.130 0.00 0.00 0.00 2.41
5462 12556 4.449743 TCCGTGCAAATAACTGACTACAAC 59.550 41.667 0.00 0.00 0.00 3.32
5463 12557 4.382831 CGTGCAAATAACTGACTACAACG 58.617 43.478 0.00 0.00 0.00 4.10
5464 12558 4.148891 GTGCAAATAACTGACTACAACGC 58.851 43.478 0.00 0.00 0.00 4.84
5465 12559 3.187637 TGCAAATAACTGACTACAACGCC 59.812 43.478 0.00 0.00 0.00 5.68
5466 12560 3.435671 GCAAATAACTGACTACAACGCCT 59.564 43.478 0.00 0.00 0.00 5.52
5467 12561 4.669197 GCAAATAACTGACTACAACGCCTG 60.669 45.833 0.00 0.00 0.00 4.85
5468 12562 3.955650 ATAACTGACTACAACGCCTGT 57.044 42.857 0.00 0.00 42.47 4.00
5469 12563 1.865865 AACTGACTACAACGCCTGTG 58.134 50.000 1.14 0.00 39.20 3.66
5470 12564 0.750850 ACTGACTACAACGCCTGTGT 59.249 50.000 1.14 0.00 39.20 3.72
5471 12565 1.269621 ACTGACTACAACGCCTGTGTC 60.270 52.381 1.14 7.22 39.20 3.67
5472 12566 0.747852 TGACTACAACGCCTGTGTCA 59.252 50.000 14.06 14.06 40.57 3.58
5473 12567 1.137513 GACTACAACGCCTGTGTCAC 58.862 55.000 0.00 0.00 39.20 3.67
5474 12568 0.750850 ACTACAACGCCTGTGTCACT 59.249 50.000 4.27 0.00 39.20 3.41
5475 12569 1.958579 ACTACAACGCCTGTGTCACTA 59.041 47.619 4.27 0.00 39.20 2.74
5476 12570 2.561419 ACTACAACGCCTGTGTCACTAT 59.439 45.455 4.27 0.00 39.20 2.12
5477 12571 3.760151 ACTACAACGCCTGTGTCACTATA 59.240 43.478 4.27 0.00 39.20 1.31
5478 12572 3.671008 ACAACGCCTGTGTCACTATAA 57.329 42.857 4.27 0.00 36.69 0.98
5479 12573 3.323243 ACAACGCCTGTGTCACTATAAC 58.677 45.455 4.27 0.00 36.69 1.89
5480 12574 3.243941 ACAACGCCTGTGTCACTATAACA 60.244 43.478 4.27 0.00 36.69 2.41
5481 12575 3.887621 ACGCCTGTGTCACTATAACAT 57.112 42.857 4.27 0.00 0.00 2.71
5482 12576 3.521560 ACGCCTGTGTCACTATAACATG 58.478 45.455 4.27 0.00 0.00 3.21
5483 12577 2.866156 CGCCTGTGTCACTATAACATGG 59.134 50.000 4.27 0.00 0.00 3.66
5484 12578 3.430236 CGCCTGTGTCACTATAACATGGA 60.430 47.826 4.27 0.00 0.00 3.41
5485 12579 3.871594 GCCTGTGTCACTATAACATGGAC 59.128 47.826 4.27 0.00 0.00 4.02
5486 12580 4.442706 CCTGTGTCACTATAACATGGACC 58.557 47.826 4.27 0.00 0.00 4.46
5487 12581 4.081142 CCTGTGTCACTATAACATGGACCA 60.081 45.833 4.27 0.00 0.00 4.02
5488 12582 4.827692 TGTGTCACTATAACATGGACCAC 58.172 43.478 0.00 0.00 0.00 4.16
5489 12583 3.863424 GTGTCACTATAACATGGACCACG 59.137 47.826 0.00 0.00 0.00 4.94
5490 12584 3.118920 TGTCACTATAACATGGACCACGG 60.119 47.826 0.00 0.00 0.00 4.94
5491 12585 2.159014 TCACTATAACATGGACCACGGC 60.159 50.000 0.00 0.00 0.00 5.68
5492 12586 1.834896 ACTATAACATGGACCACGGCA 59.165 47.619 0.00 0.00 0.00 5.69
5493 12587 2.210116 CTATAACATGGACCACGGCAC 58.790 52.381 0.00 0.00 0.00 5.01
5494 12588 0.326595 ATAACATGGACCACGGCACA 59.673 50.000 0.00 0.00 0.00 4.57
5495 12589 0.321210 TAACATGGACCACGGCACAG 60.321 55.000 0.00 0.00 0.00 3.66
5496 12590 3.434319 CATGGACCACGGCACAGC 61.434 66.667 0.00 0.00 0.00 4.40
5497 12591 3.952508 ATGGACCACGGCACAGCA 61.953 61.111 0.00 0.00 0.00 4.41
5498 12592 4.927782 TGGACCACGGCACAGCAC 62.928 66.667 0.00 0.00 0.00 4.40
5499 12593 4.626081 GGACCACGGCACAGCACT 62.626 66.667 0.00 0.00 0.00 4.40
5500 12594 3.044305 GACCACGGCACAGCACTC 61.044 66.667 0.00 0.00 0.00 3.51
5501 12595 4.626081 ACCACGGCACAGCACTCC 62.626 66.667 0.00 0.00 0.00 3.85
5502 12596 4.320456 CCACGGCACAGCACTCCT 62.320 66.667 0.00 0.00 0.00 3.69
5504 12598 4.996434 ACGGCACAGCACTCCTGC 62.996 66.667 0.00 0.00 45.78 4.85
5512 12606 4.803426 GCACTCCTGCTCGGGTCG 62.803 72.222 0.00 0.00 40.63 4.79
5513 12607 4.803426 CACTCCTGCTCGGGTCGC 62.803 72.222 0.00 0.00 0.00 5.19
5515 12609 2.829003 CTCCTGCTCGGGTCGCTA 60.829 66.667 0.00 0.00 0.00 4.26
5516 12610 2.829003 TCCTGCTCGGGTCGCTAG 60.829 66.667 0.00 0.00 0.00 3.42
5517 12611 4.577246 CCTGCTCGGGTCGCTAGC 62.577 72.222 4.06 4.06 36.77 3.42
5518 12612 4.914420 CTGCTCGGGTCGCTAGCG 62.914 72.222 30.91 30.91 39.14 4.26
5521 12615 2.898840 CTCGGGTCGCTAGCGGTA 60.899 66.667 34.76 16.04 40.25 4.02
5522 12616 2.894565 CTCGGGTCGCTAGCGGTAG 61.895 68.421 34.76 22.88 40.25 3.18
5523 12617 3.207669 CGGGTCGCTAGCGGTAGT 61.208 66.667 34.76 0.00 40.25 2.73
5524 12618 2.412112 GGGTCGCTAGCGGTAGTG 59.588 66.667 34.76 25.36 40.25 2.74
5525 12619 2.117156 GGGTCGCTAGCGGTAGTGA 61.117 63.158 34.76 28.73 42.39 3.41
5527 12621 3.506108 TCGCTAGCGGTAGTGACC 58.494 61.111 34.76 9.86 40.24 4.02
5528 12622 1.077930 TCGCTAGCGGTAGTGACCT 60.078 57.895 34.76 0.00 44.46 3.85
5529 12623 0.178767 TCGCTAGCGGTAGTGACCTA 59.821 55.000 34.76 10.51 44.46 3.08
5530 12624 1.019673 CGCTAGCGGTAGTGACCTAA 58.980 55.000 29.29 0.00 44.46 2.69
5531 12625 1.268437 CGCTAGCGGTAGTGACCTAAC 60.268 57.143 29.29 5.58 44.46 2.34
5532 12626 2.022934 GCTAGCGGTAGTGACCTAACT 58.977 52.381 21.77 0.00 44.46 2.24
5533 12627 2.033174 GCTAGCGGTAGTGACCTAACTC 59.967 54.545 21.77 0.00 44.46 3.01
5534 12628 2.211250 AGCGGTAGTGACCTAACTCA 57.789 50.000 0.00 0.00 44.46 3.41
5535 12629 2.093106 AGCGGTAGTGACCTAACTCAG 58.907 52.381 0.00 0.00 44.46 3.35
5536 12630 2.089980 GCGGTAGTGACCTAACTCAGA 58.910 52.381 0.00 0.00 44.46 3.27
5537 12631 2.097791 GCGGTAGTGACCTAACTCAGAG 59.902 54.545 0.00 0.00 44.46 3.35
5538 12632 3.345414 CGGTAGTGACCTAACTCAGAGT 58.655 50.000 0.00 0.00 44.46 3.24
5539 12633 3.757493 CGGTAGTGACCTAACTCAGAGTT 59.243 47.826 19.81 19.81 44.46 3.01
5540 12634 4.217983 CGGTAGTGACCTAACTCAGAGTTT 59.782 45.833 21.05 3.27 44.46 2.66
5541 12635 5.278858 CGGTAGTGACCTAACTCAGAGTTTT 60.279 44.000 21.05 6.32 44.46 2.43
5542 12636 6.522946 GGTAGTGACCTAACTCAGAGTTTTT 58.477 40.000 21.05 5.96 43.16 1.94
5556 12650 2.843545 TTTTTCGCTCCCCTGGCT 59.156 55.556 0.00 0.00 0.00 4.75
5557 12651 1.303317 TTTTTCGCTCCCCTGGCTC 60.303 57.895 0.00 0.00 0.00 4.70
5558 12652 2.063015 TTTTTCGCTCCCCTGGCTCA 62.063 55.000 0.00 0.00 0.00 4.26
5559 12653 2.063015 TTTTCGCTCCCCTGGCTCAA 62.063 55.000 0.00 0.00 0.00 3.02
5560 12654 2.063015 TTTCGCTCCCCTGGCTCAAA 62.063 55.000 0.00 0.00 0.00 2.69
5561 12655 1.852157 TTCGCTCCCCTGGCTCAAAT 61.852 55.000 0.00 0.00 0.00 2.32
5562 12656 1.379044 CGCTCCCCTGGCTCAAATT 60.379 57.895 0.00 0.00 0.00 1.82
5563 12657 0.967380 CGCTCCCCTGGCTCAAATTT 60.967 55.000 0.00 0.00 0.00 1.82
5564 12658 0.820226 GCTCCCCTGGCTCAAATTTC 59.180 55.000 0.00 0.00 0.00 2.17
5565 12659 1.098050 CTCCCCTGGCTCAAATTTCG 58.902 55.000 0.00 0.00 0.00 3.46
5566 12660 0.323360 TCCCCTGGCTCAAATTTCGG 60.323 55.000 0.00 0.00 0.00 4.30
5567 12661 0.611896 CCCCTGGCTCAAATTTCGGT 60.612 55.000 0.00 0.00 0.00 4.69
5568 12662 0.811281 CCCTGGCTCAAATTTCGGTC 59.189 55.000 0.00 0.00 0.00 4.79
5569 12663 0.447801 CCTGGCTCAAATTTCGGTCG 59.552 55.000 0.00 0.00 0.00 4.79
5570 12664 1.156736 CTGGCTCAAATTTCGGTCGT 58.843 50.000 0.00 0.00 0.00 4.34
5571 12665 0.871722 TGGCTCAAATTTCGGTCGTG 59.128 50.000 0.00 0.00 0.00 4.35
5572 12666 0.872388 GGCTCAAATTTCGGTCGTGT 59.128 50.000 0.00 0.00 0.00 4.49
5573 12667 1.265905 GGCTCAAATTTCGGTCGTGTT 59.734 47.619 0.00 0.00 0.00 3.32
5574 12668 2.481185 GGCTCAAATTTCGGTCGTGTTA 59.519 45.455 0.00 0.00 0.00 2.41
5575 12669 3.424433 GGCTCAAATTTCGGTCGTGTTAG 60.424 47.826 0.00 0.00 0.00 2.34
5576 12670 3.732943 CTCAAATTTCGGTCGTGTTAGC 58.267 45.455 0.00 0.00 0.00 3.09
5577 12671 2.481185 TCAAATTTCGGTCGTGTTAGCC 59.519 45.455 0.00 0.00 0.00 3.93
5578 12672 2.467566 AATTTCGGTCGTGTTAGCCT 57.532 45.000 0.00 0.00 0.00 4.58
5579 12673 2.467566 ATTTCGGTCGTGTTAGCCTT 57.532 45.000 0.00 0.00 0.00 4.35
5580 12674 3.598019 ATTTCGGTCGTGTTAGCCTTA 57.402 42.857 0.00 0.00 0.00 2.69
5581 12675 3.383620 TTTCGGTCGTGTTAGCCTTAA 57.616 42.857 0.00 0.00 0.00 1.85
5582 12676 3.383620 TTCGGTCGTGTTAGCCTTAAA 57.616 42.857 0.00 0.00 0.00 1.52
5583 12677 2.950433 TCGGTCGTGTTAGCCTTAAAG 58.050 47.619 0.00 0.00 0.00 1.85
5584 12678 2.557924 TCGGTCGTGTTAGCCTTAAAGA 59.442 45.455 0.00 0.00 0.00 2.52
5585 12679 3.005684 TCGGTCGTGTTAGCCTTAAAGAA 59.994 43.478 0.00 0.00 0.00 2.52
5586 12680 3.122445 CGGTCGTGTTAGCCTTAAAGAAC 59.878 47.826 0.00 0.00 0.00 3.01
5587 12681 4.313282 GGTCGTGTTAGCCTTAAAGAACT 58.687 43.478 0.00 0.00 0.00 3.01
5588 12682 5.473039 GGTCGTGTTAGCCTTAAAGAACTA 58.527 41.667 0.00 0.00 0.00 2.24
5589 12683 5.575995 GGTCGTGTTAGCCTTAAAGAACTAG 59.424 44.000 0.00 0.00 0.00 2.57
5590 12684 5.061933 GTCGTGTTAGCCTTAAAGAACTAGC 59.938 44.000 0.00 0.00 0.00 3.42
5591 12685 4.927425 CGTGTTAGCCTTAAAGAACTAGCA 59.073 41.667 0.00 0.00 0.00 3.49
5592 12686 5.062308 CGTGTTAGCCTTAAAGAACTAGCAG 59.938 44.000 0.00 0.00 0.00 4.24
5593 12687 4.935808 TGTTAGCCTTAAAGAACTAGCAGC 59.064 41.667 0.00 0.00 0.00 5.25
5594 12688 3.990959 AGCCTTAAAGAACTAGCAGCT 57.009 42.857 0.00 0.00 0.00 4.24
5595 12689 3.604582 AGCCTTAAAGAACTAGCAGCTG 58.395 45.455 10.11 10.11 0.00 4.24
5596 12690 2.096657 GCCTTAAAGAACTAGCAGCTGC 59.903 50.000 31.53 31.53 42.49 5.25
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 0.468400 ATAGAGCGAGGGGAGTGGAC 60.468 60.000 0.00 0.00 0.00 4.02
40 41 2.370445 CCCTCAACGGCTCTCCCAT 61.370 63.158 0.00 0.00 0.00 4.00
88 90 2.596046 AACCAAACATGGGCGCGA 60.596 55.556 12.10 0.00 0.00 5.87
146 4796 9.063615 GTTCTAATTCTCCCTCAGTTAAAAACA 57.936 33.333 0.00 0.00 0.00 2.83
155 4805 6.293004 ACAAGAGTTCTAATTCTCCCTCAG 57.707 41.667 0.00 0.00 0.00 3.35
160 4810 9.490379 TGTAAGAAACAAGAGTTCTAATTCTCC 57.510 33.333 0.00 0.00 36.84 3.71
192 4842 7.749539 ACCTTAAACAGAAACAAATTGTTCG 57.250 32.000 12.11 6.59 40.14 3.95
269 4921 5.744666 TTATTATTGCTCCGTAGTTTGGC 57.255 39.130 0.00 0.00 0.00 4.52
275 4927 9.395707 CTACTGTACTTTATTATTGCTCCGTAG 57.604 37.037 0.00 0.00 0.00 3.51
292 4944 9.367444 GTGATTAATTGTGCTAACTACTGTACT 57.633 33.333 0.00 0.00 0.00 2.73
293 4945 8.601476 GGTGATTAATTGTGCTAACTACTGTAC 58.399 37.037 0.00 0.00 0.00 2.90
296 4948 7.119116 TGTGGTGATTAATTGTGCTAACTACTG 59.881 37.037 0.00 0.00 0.00 2.74
332 4984 8.983724 TGGAAATCAATTTCGGAAAAATGTTAC 58.016 29.630 7.33 3.57 45.37 2.50
333 4985 9.547753 TTGGAAATCAATTTCGGAAAAATGTTA 57.452 25.926 7.33 0.00 45.37 2.41
334 4986 8.443953 TTGGAAATCAATTTCGGAAAAATGTT 57.556 26.923 7.33 2.94 45.37 2.71
362 5014 8.486210 TGGTGATTACTGAAGTTCTAATGCTAT 58.514 33.333 4.17 0.00 0.00 2.97
453 5105 2.390599 GCGGACGCTTTCTGATGCA 61.391 57.895 9.76 0.00 38.26 3.96
467 5119 4.500127 TCATTTCTATTTCTGAACGCGGA 58.500 39.130 12.47 0.00 0.00 5.54
509 5161 3.513909 TTGGGAGCATCTTGGATATGG 57.486 47.619 0.00 0.00 33.73 2.74
542 7532 4.221041 TGTGATGGATGATGCAAACAACAT 59.779 37.500 13.29 13.29 41.54 2.71
543 7533 3.573110 TGTGATGGATGATGCAAACAACA 59.427 39.130 3.89 0.00 32.62 3.33
578 7568 0.833949 CTCCTCCCTCCTGTTTAGGC 59.166 60.000 0.00 0.00 44.22 3.93
672 7662 0.110147 GCCGTCGGATCTACGATCAG 60.110 60.000 17.49 2.45 45.47 2.90
673 7663 0.816421 TGCCGTCGGATCTACGATCA 60.816 55.000 17.49 13.71 45.47 2.92
867 7857 1.680105 CGCGCCGTATTTATAGCCGG 61.680 60.000 0.00 0.00 43.22 6.13
944 7934 0.107459 GGGTGGATGAGGCTGAAGAC 60.107 60.000 0.00 0.00 0.00 3.01
951 7941 2.978946 TTTCGGGGGTGGATGAGGC 61.979 63.158 0.00 0.00 0.00 4.70
1440 8430 1.128692 CCGGCGAGTTGAAGAACAATC 59.871 52.381 9.30 0.00 40.76 2.67
1468 8458 2.761208 ACTCTGGGACGATCCTGTTTAG 59.239 50.000 0.00 0.00 36.57 1.85
1469 8459 2.816411 ACTCTGGGACGATCCTGTTTA 58.184 47.619 0.00 0.00 36.57 2.01
1534 8529 1.194772 CAAAACGACGAGAAAGGCCTC 59.805 52.381 5.23 0.00 0.00 4.70
1536 8531 0.942252 ACAAAACGACGAGAAAGGCC 59.058 50.000 0.00 0.00 0.00 5.19
1593 8588 3.319122 GTGTTGTTTTTCCAGATCTGCCT 59.681 43.478 17.76 0.00 0.00 4.75
1921 8922 1.998315 CGATGGAGAACAAGCAGTCTG 59.002 52.381 0.00 0.00 0.00 3.51
1951 8952 3.627577 ACAACAGCAACCAACAGTTAGAG 59.372 43.478 0.00 0.00 36.18 2.43
2114 9115 4.710423 TTGCAATTGCGAGGCTAAATTA 57.290 36.364 24.58 0.12 45.83 1.40
2123 9124 3.000078 GCTCATTTCATTGCAATTGCGAG 60.000 43.478 24.11 20.61 45.83 5.03
2149 9150 5.412594 TGGCATCAGTATTCAGTTTTGTCTC 59.587 40.000 0.00 0.00 0.00 3.36
2173 9174 0.407139 AAGAAGCAGCAGGGATGGTT 59.593 50.000 0.00 0.00 42.28 3.67
2376 9377 1.600957 CGGACATGATGAATCTGTGGC 59.399 52.381 0.00 0.00 0.00 5.01
2391 9392 0.892755 AATAAGTCGCAGTCCGGACA 59.107 50.000 35.00 13.07 37.59 4.02
2395 9396 1.659098 GGACAAATAAGTCGCAGTCCG 59.341 52.381 0.00 0.00 39.42 4.79
2506 9507 4.615834 CGGCGCTCGAGTAGAGGC 62.616 72.222 15.13 13.78 46.91 4.70
2585 9586 1.457831 GAGGACGAGGGGCTGGTAT 60.458 63.158 0.00 0.00 0.00 2.73
2612 9613 2.988010 TGCTATGCACCTTCTCGAAT 57.012 45.000 0.00 0.00 31.71 3.34
2674 9675 1.061131 CGTCACACTACCTACCGTACG 59.939 57.143 8.69 8.69 0.00 3.67
2822 9823 1.078848 GAGATGGCGCTTGGTGACT 60.079 57.895 7.64 0.00 0.00 3.41
2825 9826 1.769098 CGATGAGATGGCGCTTGGTG 61.769 60.000 7.64 0.00 0.00 4.17
2849 9850 0.385974 CAAACTTCTTGGCGGCTTCG 60.386 55.000 11.43 0.00 0.00 3.79
2963 9967 7.969536 ACATATTAGAAACATGAGATTCCCG 57.030 36.000 0.00 0.00 0.00 5.14
3035 10039 3.471680 GATGGTTCCAAGATAGTCAGCC 58.528 50.000 0.00 0.00 0.00 4.85
3132 10136 9.387405 AGTCTCAAACTTGTTATGCCAAGCATC 62.387 40.741 5.14 0.00 41.35 3.91
3146 10150 6.094881 TCTGTTGGGTTTTAGTCTCAAACTTG 59.905 38.462 9.04 0.00 39.55 3.16
3149 10153 6.127842 TGTTCTGTTGGGTTTTAGTCTCAAAC 60.128 38.462 1.62 1.62 33.98 2.93
3157 10161 4.638421 TGTGAGTGTTCTGTTGGGTTTTAG 59.362 41.667 0.00 0.00 0.00 1.85
3209 10215 4.019321 TGCCAAGATGTCTTAAGGCTTACT 60.019 41.667 19.01 2.38 42.35 2.24
3210 10216 4.261801 TGCCAAGATGTCTTAAGGCTTAC 58.738 43.478 19.01 0.00 42.35 2.34
3234 10240 8.089115 AGTGAGCAGTCTTTTTCATTTACTAC 57.911 34.615 0.00 0.00 0.00 2.73
3261 10267 1.743321 CTCTGATCCCCCGCTGTCTC 61.743 65.000 0.00 0.00 0.00 3.36
3449 10455 4.689549 TCGTCGGAGCCTTCCCCA 62.690 66.667 0.00 0.00 40.67 4.96
3500 10506 0.771755 GGAACTCCTCCTTGTTGGGT 59.228 55.000 0.00 0.00 41.61 4.51
3503 10509 2.638480 TGTGGAACTCCTCCTTGTTG 57.362 50.000 0.00 0.00 45.64 3.33
3583 10590 3.250040 ACGAGTGTATCTTGGTTGTTTGC 59.750 43.478 0.00 0.00 32.04 3.68
3780 10788 2.757868 AGATGAGTGAGACTGTACCAGC 59.242 50.000 0.00 0.00 34.37 4.85
3820 10846 9.657419 AGAAAATTCAGGGCAAAAATATAACAG 57.343 29.630 0.00 0.00 0.00 3.16
3835 10861 6.725246 ACAAGTAAACGTCAGAAAATTCAGG 58.275 36.000 0.00 0.00 0.00 3.86
3854 10888 2.885676 CGTCGCAGCAGCAACAAGT 61.886 57.895 0.82 0.00 42.27 3.16
3957 11000 6.432783 TCTTCTGAAAAACTCAAACAAGGTGA 59.567 34.615 0.00 0.00 32.17 4.02
3991 11034 1.269621 CCCCTGTGCATACTACGCTAC 60.270 57.143 0.00 0.00 0.00 3.58
3992 11035 1.037493 CCCCTGTGCATACTACGCTA 58.963 55.000 0.00 0.00 0.00 4.26
4154 11218 4.874977 GTACTCCTCTGCGGCGCC 62.875 72.222 30.82 19.07 0.00 6.53
4155 11219 4.874977 GGTACTCCTCTGCGGCGC 62.875 72.222 27.44 27.44 0.00 6.53
4183 11247 1.244019 ATGCTTCCTTGTTGACGGGC 61.244 55.000 0.00 0.00 0.00 6.13
4187 11251 5.811100 GGTAGTAGTATGCTTCCTTGTTGAC 59.189 44.000 0.00 0.00 35.45 3.18
4198 11262 4.924625 AGATCATCCGGTAGTAGTATGCT 58.075 43.478 0.00 0.00 33.55 3.79
4201 11265 5.802465 TCGAAGATCATCCGGTAGTAGTAT 58.198 41.667 0.00 0.00 0.00 2.12
4243 11307 3.247173 GCATCTGTCTGAATCAATCGGTC 59.753 47.826 0.00 0.00 35.76 4.79
4245 11309 2.547211 GGCATCTGTCTGAATCAATCGG 59.453 50.000 0.00 0.00 35.59 4.18
4246 11310 3.200483 TGGCATCTGTCTGAATCAATCG 58.800 45.455 0.00 0.00 0.00 3.34
4251 11315 2.355132 CTGCTTGGCATCTGTCTGAATC 59.645 50.000 0.00 0.00 38.13 2.52
4259 11326 3.503363 TCAGTTAAACTGCTTGGCATCTG 59.497 43.478 0.00 0.00 45.54 2.90
4264 11331 1.663161 GCGTCAGTTAAACTGCTTGGC 60.663 52.381 0.00 0.00 45.54 4.52
4288 11363 6.816640 CACGTCAGTAAATAGATCCTTCCAAA 59.183 38.462 0.00 0.00 0.00 3.28
4299 11374 3.000041 TGCCTTGCACGTCAGTAAATAG 59.000 45.455 0.00 0.00 31.71 1.73
4326 11401 1.354040 CGACTCCTGCATCAGTTCAC 58.646 55.000 0.00 0.00 0.00 3.18
4449 11524 1.613317 ATCGTTGTGGGAGGCGATGA 61.613 55.000 0.00 0.00 41.65 2.92
4492 11567 4.973360 CCGTTGCCGTTGCCGTTG 62.973 66.667 0.00 0.00 36.33 4.10
4549 11624 4.676586 GCGTTGGCGTTCCCGTTG 62.677 66.667 0.00 0.00 40.81 4.10
4560 11635 4.973360 CGTTGGCGTTGGCGTTGG 62.973 66.667 0.00 0.00 41.24 3.77
4561 11636 4.973360 CCGTTGGCGTTGGCGTTG 62.973 66.667 0.00 0.00 41.24 4.10
4647 11731 2.386100 TGGGCCATCCATCAGTCCC 61.386 63.158 0.00 0.00 41.46 4.46
4709 11795 2.870411 ACTGAAGAAACGTACAACAGGC 59.130 45.455 16.09 0.00 0.00 4.85
4794 11887 1.654105 CGATCTTGTTGTACAGGCGAC 59.346 52.381 0.00 0.00 0.00 5.19
4848 11941 6.173339 ACATAAGGCGGATCGATTCAATATT 58.827 36.000 4.19 0.00 0.00 1.28
4849 11942 5.734720 ACATAAGGCGGATCGATTCAATAT 58.265 37.500 4.19 0.00 0.00 1.28
4850 11943 5.147330 ACATAAGGCGGATCGATTCAATA 57.853 39.130 4.19 0.00 0.00 1.90
4851 11944 4.008074 ACATAAGGCGGATCGATTCAAT 57.992 40.909 4.19 0.00 0.00 2.57
4852 11945 3.469008 ACATAAGGCGGATCGATTCAA 57.531 42.857 4.19 0.00 0.00 2.69
4853 11946 3.469008 AACATAAGGCGGATCGATTCA 57.531 42.857 4.19 0.00 0.00 2.57
4854 11947 3.186613 GGAAACATAAGGCGGATCGATTC 59.813 47.826 0.00 0.00 0.00 2.52
4855 11948 3.139077 GGAAACATAAGGCGGATCGATT 58.861 45.455 0.00 0.00 0.00 3.34
4856 11949 2.368875 AGGAAACATAAGGCGGATCGAT 59.631 45.455 0.00 0.00 0.00 3.59
4885 11978 2.028876 ACAACAAGAAAAGAACGGGGG 58.971 47.619 0.00 0.00 0.00 5.40
4911 12005 0.820891 GGAAGGCGGCATCACATCAT 60.821 55.000 16.33 0.00 0.00 2.45
4936 12030 1.433534 GTTTCAGGAGCGAAGAGTGG 58.566 55.000 0.00 0.00 0.00 4.00
4997 12091 0.110419 TGGCGAATGCGAAACGAAAG 60.110 50.000 0.00 0.00 44.10 2.62
5023 12117 1.216678 TCCTTCAAACCAAAGGAGGCA 59.783 47.619 0.51 0.00 45.74 4.75
5028 12122 4.846779 TCGAATTCCTTCAAACCAAAGG 57.153 40.909 0.00 0.00 43.94 3.11
5088 12182 6.777580 TCCTTCAAACCAAAGAGCTCTAAAAT 59.222 34.615 18.59 0.00 0.00 1.82
5231 12325 9.716531 ATGACATGTATCTCAAATCGTATGAAT 57.283 29.630 0.00 0.00 0.00 2.57
5232 12326 9.196552 GATGACATGTATCTCAAATCGTATGAA 57.803 33.333 0.00 0.00 0.00 2.57
5233 12327 8.579863 AGATGACATGTATCTCAAATCGTATGA 58.420 33.333 0.00 0.00 29.05 2.15
5234 12328 8.754230 AGATGACATGTATCTCAAATCGTATG 57.246 34.615 0.00 0.00 29.05 2.39
5235 12329 8.978564 GAGATGACATGTATCTCAAATCGTAT 57.021 34.615 24.95 3.54 46.22 3.06
5244 12338 8.504815 CATGGAAAATGAGATGACATGTATCTC 58.495 37.037 24.04 24.04 46.82 2.75
5245 12339 7.997223 ACATGGAAAATGAGATGACATGTATCT 59.003 33.333 14.05 14.05 43.73 1.98
5246 12340 8.162878 ACATGGAAAATGAGATGACATGTATC 57.837 34.615 0.00 2.87 43.73 2.24
5249 12343 8.529424 AATACATGGAAAATGAGATGACATGT 57.471 30.769 0.00 0.00 46.22 3.21
5250 12344 9.811995 AAAATACATGGAAAATGAGATGACATG 57.188 29.630 0.00 0.00 39.88 3.21
5252 12346 9.246670 AGAAAATACATGGAAAATGAGATGACA 57.753 29.630 0.00 0.00 0.00 3.58
5253 12347 9.512435 CAGAAAATACATGGAAAATGAGATGAC 57.488 33.333 0.00 0.00 0.00 3.06
5254 12348 9.246670 ACAGAAAATACATGGAAAATGAGATGA 57.753 29.630 0.00 0.00 0.00 2.92
5255 12349 9.865321 AACAGAAAATACATGGAAAATGAGATG 57.135 29.630 0.00 0.00 0.00 2.90
5287 12381 9.413734 CTCCTTTCATTCATAGGGTAGAAAATT 57.586 33.333 0.00 0.00 0.00 1.82
5288 12382 8.001292 CCTCCTTTCATTCATAGGGTAGAAAAT 58.999 37.037 0.00 0.00 0.00 1.82
5289 12383 7.346471 CCTCCTTTCATTCATAGGGTAGAAAA 58.654 38.462 0.00 0.00 0.00 2.29
5290 12384 6.634955 GCCTCCTTTCATTCATAGGGTAGAAA 60.635 42.308 0.00 0.00 0.00 2.52
5291 12385 5.163195 GCCTCCTTTCATTCATAGGGTAGAA 60.163 44.000 0.00 0.00 0.00 2.10
5292 12386 4.348168 GCCTCCTTTCATTCATAGGGTAGA 59.652 45.833 0.00 0.00 0.00 2.59
5293 12387 4.505742 GGCCTCCTTTCATTCATAGGGTAG 60.506 50.000 0.00 0.00 0.00 3.18
5294 12388 3.394606 GGCCTCCTTTCATTCATAGGGTA 59.605 47.826 0.00 0.00 0.00 3.69
5295 12389 2.175715 GGCCTCCTTTCATTCATAGGGT 59.824 50.000 0.00 0.00 0.00 4.34
5296 12390 2.444766 AGGCCTCCTTTCATTCATAGGG 59.555 50.000 0.00 0.00 0.00 3.53
5297 12391 3.872459 AGGCCTCCTTTCATTCATAGG 57.128 47.619 0.00 0.00 0.00 2.57
5298 12392 6.294397 GCATTTAGGCCTCCTTTCATTCATAG 60.294 42.308 9.68 0.00 34.61 2.23
5299 12393 5.536161 GCATTTAGGCCTCCTTTCATTCATA 59.464 40.000 9.68 0.00 34.61 2.15
5300 12394 4.343239 GCATTTAGGCCTCCTTTCATTCAT 59.657 41.667 9.68 0.00 34.61 2.57
5301 12395 3.701040 GCATTTAGGCCTCCTTTCATTCA 59.299 43.478 9.68 0.00 34.61 2.57
5302 12396 3.701040 TGCATTTAGGCCTCCTTTCATTC 59.299 43.478 9.68 0.00 34.61 2.67
5303 12397 3.448660 GTGCATTTAGGCCTCCTTTCATT 59.551 43.478 9.68 0.00 34.61 2.57
5304 12398 3.026694 GTGCATTTAGGCCTCCTTTCAT 58.973 45.455 9.68 0.00 34.61 2.57
5305 12399 2.446435 GTGCATTTAGGCCTCCTTTCA 58.554 47.619 9.68 0.00 34.61 2.69
5306 12400 1.751351 GGTGCATTTAGGCCTCCTTTC 59.249 52.381 9.68 0.00 34.61 2.62
5307 12401 1.077005 TGGTGCATTTAGGCCTCCTTT 59.923 47.619 9.68 0.00 34.61 3.11
5308 12402 0.704076 TGGTGCATTTAGGCCTCCTT 59.296 50.000 9.68 0.00 34.61 3.36
5309 12403 0.257039 CTGGTGCATTTAGGCCTCCT 59.743 55.000 9.68 0.00 37.71 3.69
5310 12404 0.255890 TCTGGTGCATTTAGGCCTCC 59.744 55.000 9.68 2.11 0.00 4.30
5311 12405 1.340017 TGTCTGGTGCATTTAGGCCTC 60.340 52.381 9.68 0.00 0.00 4.70
5312 12406 0.698238 TGTCTGGTGCATTTAGGCCT 59.302 50.000 11.78 11.78 0.00 5.19
5313 12407 0.811281 GTGTCTGGTGCATTTAGGCC 59.189 55.000 0.00 0.00 0.00 5.19
5314 12408 1.740025 GAGTGTCTGGTGCATTTAGGC 59.260 52.381 0.00 0.00 0.00 3.93
5315 12409 3.340814 AGAGTGTCTGGTGCATTTAGG 57.659 47.619 0.00 0.00 0.00 2.69
5316 12410 4.318332 TGAAGAGTGTCTGGTGCATTTAG 58.682 43.478 0.00 0.00 0.00 1.85
5317 12411 4.040339 TCTGAAGAGTGTCTGGTGCATTTA 59.960 41.667 0.00 0.00 0.00 1.40
5318 12412 3.144506 CTGAAGAGTGTCTGGTGCATTT 58.855 45.455 0.00 0.00 0.00 2.32
5319 12413 2.369860 TCTGAAGAGTGTCTGGTGCATT 59.630 45.455 0.00 0.00 0.00 3.56
5320 12414 1.973515 TCTGAAGAGTGTCTGGTGCAT 59.026 47.619 0.00 0.00 0.00 3.96
5321 12415 1.413118 TCTGAAGAGTGTCTGGTGCA 58.587 50.000 0.00 0.00 0.00 4.57
5322 12416 2.533266 TTCTGAAGAGTGTCTGGTGC 57.467 50.000 0.00 0.00 0.00 5.01
5323 12417 5.059161 TGAATTTCTGAAGAGTGTCTGGTG 58.941 41.667 0.00 0.00 0.00 4.17
5324 12418 5.070981 TCTGAATTTCTGAAGAGTGTCTGGT 59.929 40.000 3.74 0.00 0.00 4.00
5325 12419 5.545588 TCTGAATTTCTGAAGAGTGTCTGG 58.454 41.667 3.74 0.00 0.00 3.86
5326 12420 6.705381 AGTTCTGAATTTCTGAAGAGTGTCTG 59.295 38.462 16.27 0.00 35.48 3.51
5327 12421 6.705381 CAGTTCTGAATTTCTGAAGAGTGTCT 59.295 38.462 16.27 8.24 35.48 3.41
5328 12422 6.073331 CCAGTTCTGAATTTCTGAAGAGTGTC 60.073 42.308 16.27 6.50 35.48 3.67
5329 12423 5.762218 CCAGTTCTGAATTTCTGAAGAGTGT 59.238 40.000 16.27 1.01 35.48 3.55
5330 12424 5.994054 TCCAGTTCTGAATTTCTGAAGAGTG 59.006 40.000 16.27 13.71 35.48 3.51
5331 12425 6.179906 TCCAGTTCTGAATTTCTGAAGAGT 57.820 37.500 16.27 4.90 35.48 3.24
5332 12426 7.684937 AATCCAGTTCTGAATTTCTGAAGAG 57.315 36.000 16.27 12.23 35.48 2.85
5333 12427 7.040201 CCAAATCCAGTTCTGAATTTCTGAAGA 60.040 37.037 16.27 11.79 35.48 2.87
5334 12428 7.088905 CCAAATCCAGTTCTGAATTTCTGAAG 58.911 38.462 16.27 8.09 35.48 3.02
5335 12429 6.015180 CCCAAATCCAGTTCTGAATTTCTGAA 60.015 38.462 12.96 12.96 32.96 3.02
5336 12430 5.477984 CCCAAATCCAGTTCTGAATTTCTGA 59.522 40.000 7.78 2.19 0.00 3.27
5337 12431 5.244626 ACCCAAATCCAGTTCTGAATTTCTG 59.755 40.000 1.00 0.00 0.00 3.02
5338 12432 5.244626 CACCCAAATCCAGTTCTGAATTTCT 59.755 40.000 1.00 0.00 0.00 2.52
5339 12433 5.011023 ACACCCAAATCCAGTTCTGAATTTC 59.989 40.000 1.00 0.00 0.00 2.17
5340 12434 4.901250 ACACCCAAATCCAGTTCTGAATTT 59.099 37.500 1.00 0.00 0.00 1.82
5341 12435 4.281688 CACACCCAAATCCAGTTCTGAATT 59.718 41.667 1.00 0.00 0.00 2.17
5342 12436 3.828451 CACACCCAAATCCAGTTCTGAAT 59.172 43.478 1.00 0.00 0.00 2.57
5343 12437 3.221771 CACACCCAAATCCAGTTCTGAA 58.778 45.455 1.00 0.00 0.00 3.02
5344 12438 2.862541 CACACCCAAATCCAGTTCTGA 58.137 47.619 1.00 0.00 0.00 3.27
5345 12439 1.270550 GCACACCCAAATCCAGTTCTG 59.729 52.381 0.00 0.00 0.00 3.02
5346 12440 1.133513 TGCACACCCAAATCCAGTTCT 60.134 47.619 0.00 0.00 0.00 3.01
5347 12441 1.327303 TGCACACCCAAATCCAGTTC 58.673 50.000 0.00 0.00 0.00 3.01
5348 12442 1.688197 CTTGCACACCCAAATCCAGTT 59.312 47.619 0.00 0.00 0.00 3.16
5349 12443 1.331214 CTTGCACACCCAAATCCAGT 58.669 50.000 0.00 0.00 0.00 4.00
5350 12444 1.000060 CACTTGCACACCCAAATCCAG 60.000 52.381 0.00 0.00 0.00 3.86
5351 12445 1.039068 CACTTGCACACCCAAATCCA 58.961 50.000 0.00 0.00 0.00 3.41
5352 12446 0.319813 GCACTTGCACACCCAAATCC 60.320 55.000 0.00 0.00 41.59 3.01
5353 12447 0.319813 GGCACTTGCACACCCAAATC 60.320 55.000 3.15 0.00 44.36 2.17
5354 12448 0.760189 AGGCACTTGCACACCCAAAT 60.760 50.000 3.15 0.00 44.36 2.32
5355 12449 1.381056 AGGCACTTGCACACCCAAA 60.381 52.632 3.15 0.00 44.36 3.28
5356 12450 2.278404 AGGCACTTGCACACCCAA 59.722 55.556 3.15 0.00 44.36 4.12
5368 12462 1.675552 AATACCCGCACATAAGGCAC 58.324 50.000 0.00 0.00 0.00 5.01
5369 12463 3.780804 ATAATACCCGCACATAAGGCA 57.219 42.857 0.00 0.00 0.00 4.75
5370 12464 5.935789 TCTAAATAATACCCGCACATAAGGC 59.064 40.000 0.00 0.00 0.00 4.35
5371 12465 7.972832 TTCTAAATAATACCCGCACATAAGG 57.027 36.000 0.00 0.00 0.00 2.69
5372 12466 9.214957 TGATTCTAAATAATACCCGCACATAAG 57.785 33.333 0.00 0.00 0.00 1.73
5373 12467 9.733556 ATGATTCTAAATAATACCCGCACATAA 57.266 29.630 0.00 0.00 0.00 1.90
5374 12468 9.161629 CATGATTCTAAATAATACCCGCACATA 57.838 33.333 0.00 0.00 0.00 2.29
5375 12469 7.362056 GCATGATTCTAAATAATACCCGCACAT 60.362 37.037 0.00 0.00 0.00 3.21
5376 12470 6.072728 GCATGATTCTAAATAATACCCGCACA 60.073 38.462 0.00 0.00 0.00 4.57
5377 12471 6.314784 GCATGATTCTAAATAATACCCGCAC 58.685 40.000 0.00 0.00 0.00 5.34
5378 12472 5.414454 GGCATGATTCTAAATAATACCCGCA 59.586 40.000 0.00 0.00 0.00 5.69
5379 12473 5.648092 AGGCATGATTCTAAATAATACCCGC 59.352 40.000 0.00 0.00 0.00 6.13
5380 12474 6.878923 TGAGGCATGATTCTAAATAATACCCG 59.121 38.462 0.00 0.00 0.00 5.28
5381 12475 8.680903 CATGAGGCATGATTCTAAATAATACCC 58.319 37.037 0.00 0.00 43.81 3.69
5382 12476 9.236006 ACATGAGGCATGATTCTAAATAATACC 57.764 33.333 13.79 0.00 43.81 2.73
5384 12478 8.733458 GCACATGAGGCATGATTCTAAATAATA 58.267 33.333 13.79 0.00 43.81 0.98
5385 12479 7.231925 TGCACATGAGGCATGATTCTAAATAAT 59.768 33.333 13.79 0.00 43.81 1.28
5386 12480 6.546772 TGCACATGAGGCATGATTCTAAATAA 59.453 34.615 13.79 0.00 43.81 1.40
5387 12481 6.063404 TGCACATGAGGCATGATTCTAAATA 58.937 36.000 13.79 0.00 43.81 1.40
5388 12482 4.891168 TGCACATGAGGCATGATTCTAAAT 59.109 37.500 13.79 0.00 43.81 1.40
5389 12483 4.271661 TGCACATGAGGCATGATTCTAAA 58.728 39.130 13.79 0.00 43.81 1.85
5390 12484 3.888583 TGCACATGAGGCATGATTCTAA 58.111 40.909 13.79 0.00 43.81 2.10
5391 12485 3.564053 TGCACATGAGGCATGATTCTA 57.436 42.857 13.79 0.00 43.81 2.10
5392 12486 2.430248 TGCACATGAGGCATGATTCT 57.570 45.000 13.79 0.00 43.81 2.40
5399 12493 1.281577 TCCTTGTATGCACATGAGGCA 59.718 47.619 16.71 16.71 46.66 4.75
5400 12494 1.945394 CTCCTTGTATGCACATGAGGC 59.055 52.381 0.00 3.11 34.05 4.70
5401 12495 2.941064 CACTCCTTGTATGCACATGAGG 59.059 50.000 0.00 0.00 37.84 3.86
5402 12496 2.353889 GCACTCCTTGTATGCACATGAG 59.646 50.000 0.00 0.00 38.73 2.90
5403 12497 2.026915 AGCACTCCTTGTATGCACATGA 60.027 45.455 0.00 0.00 41.97 3.07
5404 12498 2.353889 GAGCACTCCTTGTATGCACATG 59.646 50.000 0.00 0.00 41.97 3.21
5405 12499 2.636830 GAGCACTCCTTGTATGCACAT 58.363 47.619 0.00 0.00 41.97 3.21
5406 12500 1.339055 GGAGCACTCCTTGTATGCACA 60.339 52.381 9.54 0.00 46.16 4.57
5407 12501 1.373570 GGAGCACTCCTTGTATGCAC 58.626 55.000 9.54 0.00 46.16 4.57
5408 12502 3.861341 GGAGCACTCCTTGTATGCA 57.139 52.632 9.54 0.00 46.16 3.96
5418 12512 1.300542 GCGCTGGATAGGAGCACTC 60.301 63.158 0.00 0.00 36.12 3.51
5419 12513 2.801631 GGCGCTGGATAGGAGCACT 61.802 63.158 7.64 0.00 36.12 4.40
5420 12514 2.280457 GGCGCTGGATAGGAGCAC 60.280 66.667 7.64 0.00 36.12 4.40
5421 12515 2.032860 GAAGGCGCTGGATAGGAGCA 62.033 60.000 7.64 0.00 36.12 4.26
5422 12516 1.301322 GAAGGCGCTGGATAGGAGC 60.301 63.158 7.64 0.00 0.00 4.70
5423 12517 1.369321 GGAAGGCGCTGGATAGGAG 59.631 63.158 7.64 0.00 0.00 3.69
5424 12518 2.498941 CGGAAGGCGCTGGATAGGA 61.499 63.158 7.64 0.00 0.00 2.94
5425 12519 2.029666 CGGAAGGCGCTGGATAGG 59.970 66.667 7.64 0.00 0.00 2.57
5426 12520 1.592669 CACGGAAGGCGCTGGATAG 60.593 63.158 7.64 0.00 0.00 2.08
5427 12521 2.499205 CACGGAAGGCGCTGGATA 59.501 61.111 7.64 0.00 0.00 2.59
5431 12525 1.643868 TATTTGCACGGAAGGCGCTG 61.644 55.000 7.64 0.00 35.05 5.18
5432 12526 0.958382 TTATTTGCACGGAAGGCGCT 60.958 50.000 7.64 0.00 35.05 5.92
5433 12527 0.796870 GTTATTTGCACGGAAGGCGC 60.797 55.000 0.00 0.00 0.00 6.53
5434 12528 0.802494 AGTTATTTGCACGGAAGGCG 59.198 50.000 0.00 0.00 0.00 5.52
5435 12529 1.810151 TCAGTTATTTGCACGGAAGGC 59.190 47.619 0.00 0.00 0.00 4.35
5436 12530 3.074412 AGTCAGTTATTTGCACGGAAGG 58.926 45.455 0.00 0.00 0.00 3.46
5437 12531 4.688879 TGTAGTCAGTTATTTGCACGGAAG 59.311 41.667 0.00 0.00 0.00 3.46
5438 12532 4.633175 TGTAGTCAGTTATTTGCACGGAA 58.367 39.130 0.00 0.00 0.00 4.30
5439 12533 4.260139 TGTAGTCAGTTATTTGCACGGA 57.740 40.909 0.00 0.00 0.00 4.69
5440 12534 4.665645 CGTTGTAGTCAGTTATTTGCACGG 60.666 45.833 0.00 0.00 0.00 4.94
5441 12535 4.382831 CGTTGTAGTCAGTTATTTGCACG 58.617 43.478 0.00 0.00 0.00 5.34
5442 12536 4.148891 GCGTTGTAGTCAGTTATTTGCAC 58.851 43.478 0.00 0.00 0.00 4.57
5443 12537 3.187637 GGCGTTGTAGTCAGTTATTTGCA 59.812 43.478 0.00 0.00 0.00 4.08
5444 12538 3.435671 AGGCGTTGTAGTCAGTTATTTGC 59.564 43.478 0.00 0.00 0.00 3.68
5445 12539 4.451096 ACAGGCGTTGTAGTCAGTTATTTG 59.549 41.667 0.00 0.00 38.56 2.32
5446 12540 4.451096 CACAGGCGTTGTAGTCAGTTATTT 59.549 41.667 0.00 0.00 38.16 1.40
5447 12541 3.994392 CACAGGCGTTGTAGTCAGTTATT 59.006 43.478 0.00 0.00 38.16 1.40
5448 12542 3.006537 ACACAGGCGTTGTAGTCAGTTAT 59.993 43.478 0.00 0.00 38.16 1.89
5449 12543 2.363038 ACACAGGCGTTGTAGTCAGTTA 59.637 45.455 0.00 0.00 38.16 2.24
5450 12544 1.138266 ACACAGGCGTTGTAGTCAGTT 59.862 47.619 0.00 0.00 38.16 3.16
5451 12545 0.750850 ACACAGGCGTTGTAGTCAGT 59.249 50.000 0.00 0.00 38.16 3.41
5452 12546 1.269569 TGACACAGGCGTTGTAGTCAG 60.270 52.381 15.74 1.67 40.06 3.51
5453 12547 0.747852 TGACACAGGCGTTGTAGTCA 59.252 50.000 15.74 15.74 41.34 3.41
5454 12548 1.137513 GTGACACAGGCGTTGTAGTC 58.862 55.000 0.00 12.80 38.16 2.59
5455 12549 0.750850 AGTGACACAGGCGTTGTAGT 59.249 50.000 8.59 0.00 38.16 2.73
5456 12550 2.717580 TAGTGACACAGGCGTTGTAG 57.282 50.000 8.59 0.00 38.16 2.74
5457 12551 4.022155 TGTTATAGTGACACAGGCGTTGTA 60.022 41.667 8.59 0.00 38.16 2.41
5458 12552 3.243941 TGTTATAGTGACACAGGCGTTGT 60.244 43.478 8.59 0.00 41.94 3.32
5459 12553 3.322369 TGTTATAGTGACACAGGCGTTG 58.678 45.455 8.59 0.00 0.00 4.10
5460 12554 3.671008 TGTTATAGTGACACAGGCGTT 57.329 42.857 8.59 0.00 0.00 4.84
5461 12555 3.521560 CATGTTATAGTGACACAGGCGT 58.478 45.455 8.59 0.00 0.00 5.68
5462 12556 2.866156 CCATGTTATAGTGACACAGGCG 59.134 50.000 8.59 0.00 0.00 5.52
5463 12557 3.871594 GTCCATGTTATAGTGACACAGGC 59.128 47.826 8.59 0.00 0.00 4.85
5464 12558 4.081142 TGGTCCATGTTATAGTGACACAGG 60.081 45.833 8.59 0.00 0.00 4.00
5465 12559 4.870426 GTGGTCCATGTTATAGTGACACAG 59.130 45.833 8.59 0.00 0.00 3.66
5466 12560 4.619628 CGTGGTCCATGTTATAGTGACACA 60.620 45.833 8.59 0.00 0.00 3.72
5467 12561 3.863424 CGTGGTCCATGTTATAGTGACAC 59.137 47.826 2.56 0.00 0.00 3.67
5468 12562 3.118920 CCGTGGTCCATGTTATAGTGACA 60.119 47.826 10.28 0.00 0.00 3.58
5469 12563 3.454375 CCGTGGTCCATGTTATAGTGAC 58.546 50.000 10.28 0.00 0.00 3.67
5470 12564 2.159014 GCCGTGGTCCATGTTATAGTGA 60.159 50.000 10.28 0.00 0.00 3.41
5471 12565 2.210116 GCCGTGGTCCATGTTATAGTG 58.790 52.381 10.28 0.00 0.00 2.74
5472 12566 1.834896 TGCCGTGGTCCATGTTATAGT 59.165 47.619 10.28 0.00 0.00 2.12
5473 12567 2.210116 GTGCCGTGGTCCATGTTATAG 58.790 52.381 10.28 0.00 0.00 1.31
5474 12568 1.555533 TGTGCCGTGGTCCATGTTATA 59.444 47.619 10.28 0.00 0.00 0.98
5475 12569 0.326595 TGTGCCGTGGTCCATGTTAT 59.673 50.000 10.28 0.00 0.00 1.89
5476 12570 0.321210 CTGTGCCGTGGTCCATGTTA 60.321 55.000 10.28 0.00 0.00 2.41
5477 12571 1.600636 CTGTGCCGTGGTCCATGTT 60.601 57.895 10.28 0.00 0.00 2.71
5478 12572 2.032528 CTGTGCCGTGGTCCATGT 59.967 61.111 10.28 0.00 0.00 3.21
5479 12573 3.434319 GCTGTGCCGTGGTCCATG 61.434 66.667 3.85 3.85 0.00 3.66
5480 12574 3.952508 TGCTGTGCCGTGGTCCAT 61.953 61.111 0.00 0.00 0.00 3.41
5481 12575 4.927782 GTGCTGTGCCGTGGTCCA 62.928 66.667 0.00 0.00 0.00 4.02
5482 12576 4.626081 AGTGCTGTGCCGTGGTCC 62.626 66.667 0.00 0.00 0.00 4.46
5483 12577 3.044305 GAGTGCTGTGCCGTGGTC 61.044 66.667 0.00 0.00 0.00 4.02
5484 12578 4.626081 GGAGTGCTGTGCCGTGGT 62.626 66.667 0.00 0.00 0.00 4.16
5485 12579 4.320456 AGGAGTGCTGTGCCGTGG 62.320 66.667 0.00 0.00 0.00 4.94
5486 12580 3.046087 CAGGAGTGCTGTGCCGTG 61.046 66.667 2.99 0.00 0.00 4.94
5496 12590 4.803426 GCGACCCGAGCAGGAGTG 62.803 72.222 0.00 0.00 45.00 3.51
5497 12591 3.640257 TAGCGACCCGAGCAGGAGT 62.640 63.158 0.00 0.00 45.00 3.85
5498 12592 2.829003 TAGCGACCCGAGCAGGAG 60.829 66.667 0.00 0.00 45.00 3.69
5499 12593 2.829003 CTAGCGACCCGAGCAGGA 60.829 66.667 0.00 0.00 45.00 3.86
5500 12594 4.577246 GCTAGCGACCCGAGCAGG 62.577 72.222 0.00 0.00 41.28 4.85
5501 12595 4.914420 CGCTAGCGACCCGAGCAG 62.914 72.222 32.98 0.00 41.66 4.24
5504 12598 2.894565 CTACCGCTAGCGACCCGAG 61.895 68.421 37.39 21.55 42.83 4.63
5505 12599 2.898840 CTACCGCTAGCGACCCGA 60.899 66.667 37.39 16.00 42.83 5.14
5506 12600 3.207669 ACTACCGCTAGCGACCCG 61.208 66.667 37.39 22.66 42.83 5.28
5507 12601 2.117156 TCACTACCGCTAGCGACCC 61.117 63.158 37.39 0.00 42.83 4.46
5508 12602 1.063811 GTCACTACCGCTAGCGACC 59.936 63.158 37.39 12.81 42.83 4.79
5509 12603 1.063811 GGTCACTACCGCTAGCGAC 59.936 63.158 37.39 24.76 42.83 5.19
5510 12604 3.506108 GGTCACTACCGCTAGCGA 58.494 61.111 37.39 18.38 42.83 4.93
5514 12608 8.707338 AACTCTGAGTTAGGTCACTACCGCTA 62.707 46.154 20.85 0.00 39.93 4.26
5516 12610 5.876018 AACTCTGAGTTAGGTCACTACCGC 61.876 50.000 20.85 0.00 39.93 5.68
5517 12611 3.757493 AACTCTGAGTTAGGTCACTACCG 59.243 47.826 20.85 0.00 39.93 4.02
5518 12612 5.725325 AAACTCTGAGTTAGGTCACTACC 57.275 43.478 22.30 0.00 41.06 3.18
5539 12633 1.303317 GAGCCAGGGGAGCGAAAAA 60.303 57.895 0.00 0.00 34.64 1.94
5540 12634 2.063015 TTGAGCCAGGGGAGCGAAAA 62.063 55.000 0.00 0.00 34.64 2.29
5541 12635 2.063015 TTTGAGCCAGGGGAGCGAAA 62.063 55.000 0.00 0.00 34.64 3.46
5542 12636 1.852157 ATTTGAGCCAGGGGAGCGAA 61.852 55.000 0.00 0.00 34.64 4.70
5543 12637 1.852157 AATTTGAGCCAGGGGAGCGA 61.852 55.000 0.00 0.00 34.64 4.93
5544 12638 0.967380 AAATTTGAGCCAGGGGAGCG 60.967 55.000 0.00 0.00 34.64 5.03
5545 12639 0.820226 GAAATTTGAGCCAGGGGAGC 59.180 55.000 0.00 0.00 0.00 4.70
5546 12640 1.098050 CGAAATTTGAGCCAGGGGAG 58.902 55.000 0.00 0.00 0.00 4.30
5547 12641 0.323360 CCGAAATTTGAGCCAGGGGA 60.323 55.000 0.00 0.00 0.00 4.81
5548 12642 0.611896 ACCGAAATTTGAGCCAGGGG 60.612 55.000 0.00 0.00 0.00 4.79
5549 12643 0.811281 GACCGAAATTTGAGCCAGGG 59.189 55.000 0.00 0.00 0.00 4.45
5550 12644 0.447801 CGACCGAAATTTGAGCCAGG 59.552 55.000 0.00 0.00 0.00 4.45
5551 12645 1.135972 CACGACCGAAATTTGAGCCAG 60.136 52.381 0.00 0.00 0.00 4.85
5552 12646 0.871722 CACGACCGAAATTTGAGCCA 59.128 50.000 0.00 0.00 0.00 4.75
5553 12647 0.872388 ACACGACCGAAATTTGAGCC 59.128 50.000 0.00 0.00 0.00 4.70
5554 12648 2.681152 AACACGACCGAAATTTGAGC 57.319 45.000 0.00 0.00 0.00 4.26
5555 12649 3.424433 GGCTAACACGACCGAAATTTGAG 60.424 47.826 0.00 0.00 0.00 3.02
5556 12650 2.481185 GGCTAACACGACCGAAATTTGA 59.519 45.455 0.00 0.00 0.00 2.69
5557 12651 2.482721 AGGCTAACACGACCGAAATTTG 59.517 45.455 0.00 0.00 0.00 2.32
5558 12652 2.774687 AGGCTAACACGACCGAAATTT 58.225 42.857 0.00 0.00 0.00 1.82
5559 12653 2.467566 AGGCTAACACGACCGAAATT 57.532 45.000 0.00 0.00 0.00 1.82
5560 12654 2.467566 AAGGCTAACACGACCGAAAT 57.532 45.000 0.00 0.00 0.00 2.17
5561 12655 3.383620 TTAAGGCTAACACGACCGAAA 57.616 42.857 0.00 0.00 0.00 3.46
5562 12656 3.005684 TCTTTAAGGCTAACACGACCGAA 59.994 43.478 0.00 0.00 0.00 4.30
5563 12657 2.557924 TCTTTAAGGCTAACACGACCGA 59.442 45.455 0.00 0.00 0.00 4.69
5564 12658 2.950433 TCTTTAAGGCTAACACGACCG 58.050 47.619 0.00 0.00 0.00 4.79
5565 12659 4.313282 AGTTCTTTAAGGCTAACACGACC 58.687 43.478 0.00 0.00 0.00 4.79
5566 12660 5.061933 GCTAGTTCTTTAAGGCTAACACGAC 59.938 44.000 0.00 0.00 0.00 4.34
5567 12661 5.166398 GCTAGTTCTTTAAGGCTAACACGA 58.834 41.667 0.00 0.00 0.00 4.35
5568 12662 4.927425 TGCTAGTTCTTTAAGGCTAACACG 59.073 41.667 0.00 0.00 0.00 4.49
5569 12663 5.163844 GCTGCTAGTTCTTTAAGGCTAACAC 60.164 44.000 0.00 0.00 0.00 3.32
5570 12664 4.935808 GCTGCTAGTTCTTTAAGGCTAACA 59.064 41.667 0.00 0.00 0.00 2.41
5571 12665 5.064071 CAGCTGCTAGTTCTTTAAGGCTAAC 59.936 44.000 0.00 0.00 0.00 2.34
5572 12666 5.178797 CAGCTGCTAGTTCTTTAAGGCTAA 58.821 41.667 0.00 0.00 0.00 3.09
5573 12667 4.759782 CAGCTGCTAGTTCTTTAAGGCTA 58.240 43.478 0.00 0.00 0.00 3.93
5574 12668 3.604582 CAGCTGCTAGTTCTTTAAGGCT 58.395 45.455 0.00 0.00 0.00 4.58
5575 12669 2.096657 GCAGCTGCTAGTTCTTTAAGGC 59.903 50.000 31.33 0.00 38.21 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.