Multiple sequence alignment - TraesCS4A01G108100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G108100 chr4A 100.000 2590 0 0 1 2590 125388317 125390906 0.000000e+00 4783.0
1 TraesCS4A01G108100 chr4D 92.468 1925 98 14 91 1992 341413522 341411622 0.000000e+00 2710.0
2 TraesCS4A01G108100 chr4D 85.759 316 36 8 1994 2300 85992933 85992618 2.490000e-85 326.0
3 TraesCS4A01G108100 chr4D 93.651 63 4 0 2528 2590 341410245 341410183 7.630000e-16 95.3
4 TraesCS4A01G108100 chr4D 85.366 82 8 3 2301 2380 341411628 341411549 5.940000e-12 82.4
5 TraesCS4A01G108100 chr4D 96.875 32 1 0 1931 1962 341411588 341411557 1.000000e-03 54.7
6 TraesCS4A01G108100 chr4B 85.128 1365 134 27 654 1970 423356220 423354877 0.000000e+00 1332.0
7 TraesCS4A01G108100 chr7D 88.291 316 28 8 1994 2300 348128436 348128751 1.130000e-98 370.0
8 TraesCS4A01G108100 chr7D 92.683 41 2 1 1955 1994 167359302 167359342 1.000000e-04 58.4
9 TraesCS4A01G108100 chr1A 85.443 316 34 7 1995 2300 410450628 410450315 4.160000e-83 318.0
10 TraesCS4A01G108100 chr7B 86.689 293 30 7 1995 2279 501781995 501782286 1.500000e-82 316.0
11 TraesCS4A01G108100 chr7B 84.286 280 34 7 2032 2301 716044450 716044729 5.500000e-67 265.0
12 TraesCS4A01G108100 chr7B 85.659 258 27 7 1995 2242 78072690 78072433 1.980000e-66 263.0
13 TraesCS4A01G108100 chr6D 85.081 248 26 4 1995 2231 359007998 359008245 2.570000e-60 243.0
14 TraesCS4A01G108100 chr5B 81.672 311 35 10 1995 2300 669784216 669783923 3.330000e-59 239.0
15 TraesCS4A01G108100 chr2A 87.879 165 17 3 2125 2287 729850370 729850533 9.460000e-45 191.0
16 TraesCS4A01G108100 chr2D 86.420 162 14 6 1995 2149 128373008 128373168 1.230000e-38 171.0
17 TraesCS4A01G108100 chr2D 92.683 41 2 1 1956 1995 577139954 577139994 1.000000e-04 58.4
18 TraesCS4A01G108100 chrUn 94.681 94 5 0 91 184 298898660 298898753 2.080000e-31 147.0
19 TraesCS4A01G108100 chrUn 93.651 63 4 0 2528 2590 335166213 335166275 7.630000e-16 95.3
20 TraesCS4A01G108100 chrUn 93.651 63 4 0 2528 2590 475953381 475953319 7.630000e-16 95.3
21 TraesCS4A01G108100 chr2B 100.000 34 0 0 1962 1995 182863010 182863043 2.150000e-06 63.9
22 TraesCS4A01G108100 chr5D 95.000 40 0 2 1957 1995 125781065 125781103 7.740000e-06 62.1
23 TraesCS4A01G108100 chr3D 94.872 39 2 0 1958 1996 443589840 443589802 7.740000e-06 62.1
24 TraesCS4A01G108100 chr3D 88.889 45 4 1 1951 1995 266641284 266641241 1.000000e-03 54.7
25 TraesCS4A01G108100 chr6A 94.444 36 2 0 1960 1995 111532871 111532836 3.600000e-04 56.5
26 TraesCS4A01G108100 chr3A 90.476 42 4 0 1954 1995 101859301 101859260 3.600000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G108100 chr4A 125388317 125390906 2589 False 4783.0 4783 100.000 1 2590 1 chr4A.!!$F1 2589
1 TraesCS4A01G108100 chr4D 341410183 341413522 3339 True 735.6 2710 92.090 91 2590 4 chr4D.!!$R2 2499
2 TraesCS4A01G108100 chr4B 423354877 423356220 1343 True 1332.0 1332 85.128 654 1970 1 chr4B.!!$R1 1316

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
41 42 0.108019 CCTAACCCCGTTGCTATCCC 59.892 60.0 0.0 0.0 0.0 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1832 1894 0.310854 CTTGGGCGGACTGTGAAAAC 59.689 55.0 0.0 0.0 0.0 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 4.789123 CCCGGCCTAACCCCGTTG 62.789 72.222 0.00 0.00 44.13 4.10
36 37 4.404098 CGGCCTAACCCCGTTGCT 62.404 66.667 0.00 0.00 40.84 3.91
37 38 2.992164 GGCCTAACCCCGTTGCTA 59.008 61.111 0.00 0.00 0.00 3.49
38 39 1.530283 GGCCTAACCCCGTTGCTAT 59.470 57.895 0.00 0.00 0.00 2.97
39 40 0.534427 GGCCTAACCCCGTTGCTATC 60.534 60.000 0.00 0.00 0.00 2.08
40 41 0.534427 GCCTAACCCCGTTGCTATCC 60.534 60.000 0.00 0.00 0.00 2.59
41 42 0.108019 CCTAACCCCGTTGCTATCCC 59.892 60.000 0.00 0.00 0.00 3.85
42 43 0.834612 CTAACCCCGTTGCTATCCCA 59.165 55.000 0.00 0.00 0.00 4.37
43 44 0.834612 TAACCCCGTTGCTATCCCAG 59.165 55.000 0.00 0.00 0.00 4.45
51 52 3.537874 GCTATCCCAGCCCGACGT 61.538 66.667 0.00 0.00 45.23 4.34
52 53 2.728817 CTATCCCAGCCCGACGTC 59.271 66.667 5.18 5.18 0.00 4.34
53 54 2.043752 TATCCCAGCCCGACGTCA 60.044 61.111 17.16 0.00 0.00 4.35
54 55 2.351336 CTATCCCAGCCCGACGTCAC 62.351 65.000 17.16 4.15 0.00 3.67
58 59 4.778415 CAGCCCGACGTCACCGAG 62.778 72.222 17.16 0.00 37.88 4.63
60 61 4.353437 GCCCGACGTCACCGAGTT 62.353 66.667 17.16 0.00 37.88 3.01
61 62 2.981560 GCCCGACGTCACCGAGTTA 61.982 63.158 17.16 0.00 37.88 2.24
62 63 1.805254 CCCGACGTCACCGAGTTAT 59.195 57.895 17.16 0.00 37.88 1.89
63 64 0.248377 CCCGACGTCACCGAGTTATC 60.248 60.000 17.16 0.00 37.88 1.75
64 65 0.248377 CCGACGTCACCGAGTTATCC 60.248 60.000 17.16 0.00 37.88 2.59
65 66 0.448990 CGACGTCACCGAGTTATCCA 59.551 55.000 17.16 0.00 37.88 3.41
66 67 1.065102 CGACGTCACCGAGTTATCCAT 59.935 52.381 17.16 0.00 37.88 3.41
67 68 2.460918 GACGTCACCGAGTTATCCATG 58.539 52.381 11.55 0.00 37.88 3.66
68 69 1.209128 CGTCACCGAGTTATCCATGC 58.791 55.000 0.00 0.00 35.63 4.06
69 70 1.583054 GTCACCGAGTTATCCATGCC 58.417 55.000 0.00 0.00 0.00 4.40
70 71 1.139058 GTCACCGAGTTATCCATGCCT 59.861 52.381 0.00 0.00 0.00 4.75
71 72 1.837439 TCACCGAGTTATCCATGCCTT 59.163 47.619 0.00 0.00 0.00 4.35
72 73 2.238646 TCACCGAGTTATCCATGCCTTT 59.761 45.455 0.00 0.00 0.00 3.11
73 74 2.614057 CACCGAGTTATCCATGCCTTTC 59.386 50.000 0.00 0.00 0.00 2.62
74 75 2.222027 CCGAGTTATCCATGCCTTTCC 58.778 52.381 0.00 0.00 0.00 3.13
75 76 2.158755 CCGAGTTATCCATGCCTTTCCT 60.159 50.000 0.00 0.00 0.00 3.36
76 77 3.545703 CGAGTTATCCATGCCTTTCCTT 58.454 45.455 0.00 0.00 0.00 3.36
77 78 3.313526 CGAGTTATCCATGCCTTTCCTTG 59.686 47.826 0.00 0.00 0.00 3.61
78 79 3.026694 AGTTATCCATGCCTTTCCTTGC 58.973 45.455 0.00 0.00 0.00 4.01
79 80 3.026694 GTTATCCATGCCTTTCCTTGCT 58.973 45.455 0.00 0.00 0.00 3.91
80 81 1.481871 ATCCATGCCTTTCCTTGCTG 58.518 50.000 0.00 0.00 0.00 4.41
81 82 0.405198 TCCATGCCTTTCCTTGCTGA 59.595 50.000 0.00 0.00 0.00 4.26
82 83 0.529378 CCATGCCTTTCCTTGCTGAC 59.471 55.000 0.00 0.00 0.00 3.51
83 84 1.250328 CATGCCTTTCCTTGCTGACA 58.750 50.000 0.00 0.00 0.00 3.58
84 85 1.068055 CATGCCTTTCCTTGCTGACAC 60.068 52.381 0.00 0.00 0.00 3.67
85 86 0.823356 TGCCTTTCCTTGCTGACACC 60.823 55.000 0.00 0.00 0.00 4.16
86 87 0.538287 GCCTTTCCTTGCTGACACCT 60.538 55.000 0.00 0.00 0.00 4.00
87 88 1.528129 CCTTTCCTTGCTGACACCTC 58.472 55.000 0.00 0.00 0.00 3.85
88 89 1.072965 CCTTTCCTTGCTGACACCTCT 59.927 52.381 0.00 0.00 0.00 3.69
89 90 2.149578 CTTTCCTTGCTGACACCTCTG 58.850 52.381 0.00 0.00 0.00 3.35
114 115 1.312371 CCATGCCGTCACCCGAATTT 61.312 55.000 0.00 0.00 39.56 1.82
119 120 0.321298 CCGTCACCCGAATTTGTCCT 60.321 55.000 0.00 0.00 39.56 3.85
124 125 0.178975 ACCCGAATTTGTCCTGCCAA 60.179 50.000 0.00 0.00 0.00 4.52
184 185 2.351276 GTCCAACCCGCCATCACT 59.649 61.111 0.00 0.00 0.00 3.41
185 186 2.040544 GTCCAACCCGCCATCACTG 61.041 63.158 0.00 0.00 0.00 3.66
190 191 4.864334 CCCGCCATCACTGAGCCC 62.864 72.222 0.00 0.00 0.00 5.19
191 192 4.864334 CCGCCATCACTGAGCCCC 62.864 72.222 0.00 0.00 0.00 5.80
253 263 1.480137 CCTTGACAAAAACCACCAGCA 59.520 47.619 0.00 0.00 0.00 4.41
309 321 6.908870 TGTGAGTAAACATGTATGCAGATC 57.091 37.500 0.00 0.00 0.00 2.75
328 340 7.492020 TGCAGATCCATTAATGTGTTAAAATGC 59.508 33.333 14.25 12.21 33.76 3.56
329 341 7.707893 GCAGATCCATTAATGTGTTAAAATGCT 59.292 33.333 14.25 0.00 33.76 3.79
330 342 9.590451 CAGATCCATTAATGTGTTAAAATGCTT 57.410 29.630 14.25 0.00 33.76 3.91
331 343 9.590451 AGATCCATTAATGTGTTAAAATGCTTG 57.410 29.630 14.25 0.00 33.76 4.01
332 344 7.593875 TCCATTAATGTGTTAAAATGCTTGC 57.406 32.000 14.25 0.00 33.76 4.01
333 345 7.385267 TCCATTAATGTGTTAAAATGCTTGCT 58.615 30.769 14.25 0.00 33.76 3.91
334 346 7.331440 TCCATTAATGTGTTAAAATGCTTGCTG 59.669 33.333 14.25 0.00 33.76 4.41
335 347 7.118101 CCATTAATGTGTTAAAATGCTTGCTGT 59.882 33.333 14.25 0.00 33.76 4.40
336 348 9.138062 CATTAATGTGTTAAAATGCTTGCTGTA 57.862 29.630 7.32 0.00 33.76 2.74
337 349 9.874205 ATTAATGTGTTAAAATGCTTGCTGTAT 57.126 25.926 0.00 0.00 33.76 2.29
339 351 8.915871 AATGTGTTAAAATGCTTGCTGTATAG 57.084 30.769 0.00 0.00 0.00 1.31
340 352 7.680442 TGTGTTAAAATGCTTGCTGTATAGA 57.320 32.000 0.00 0.00 0.00 1.98
341 353 8.279970 TGTGTTAAAATGCTTGCTGTATAGAT 57.720 30.769 0.00 0.00 0.00 1.98
342 354 8.183536 TGTGTTAAAATGCTTGCTGTATAGATG 58.816 33.333 0.00 0.00 0.00 2.90
343 355 8.184192 GTGTTAAAATGCTTGCTGTATAGATGT 58.816 33.333 0.00 0.00 0.00 3.06
344 356 8.183536 TGTTAAAATGCTTGCTGTATAGATGTG 58.816 33.333 0.00 0.00 0.00 3.21
345 357 6.764308 AAAATGCTTGCTGTATAGATGTGT 57.236 33.333 0.00 0.00 0.00 3.72
346 358 6.764308 AAATGCTTGCTGTATAGATGTGTT 57.236 33.333 0.00 0.00 0.00 3.32
347 359 6.764308 AATGCTTGCTGTATAGATGTGTTT 57.236 33.333 0.00 0.00 0.00 2.83
378 390 4.971939 TGTGATCTGAAGATGACAAACCA 58.028 39.130 9.75 0.00 43.71 3.67
474 491 5.491982 ACCTATTTCATCTGTGGACTGAAC 58.508 41.667 0.00 0.00 0.00 3.18
522 539 5.982356 TCATATGCTAATACTCTGGATGGC 58.018 41.667 0.00 0.00 0.00 4.40
525 542 1.344763 GCTAATACTCTGGATGGCGGT 59.655 52.381 0.00 0.00 0.00 5.68
529 546 1.496060 TACTCTGGATGGCGGTCATT 58.504 50.000 0.00 0.00 35.97 2.57
541 558 3.712733 TGGCGGTCATTATAGTTAACCCT 59.287 43.478 0.88 0.00 0.00 4.34
559 576 5.422214 ACCCTAAGAGGCCAATATTATCG 57.578 43.478 5.01 0.00 32.73 2.92
578 595 4.600692 TCGTATTCCATGGATACTGTGG 57.399 45.455 17.06 7.67 42.26 4.17
716 733 4.566907 GCCTGTCTGGGTCATAAAGGTTAA 60.567 45.833 0.00 0.00 36.00 2.01
844 865 7.503230 TCAATATTGAAAAGGATGAGCTGCATA 59.497 33.333 15.82 0.00 33.76 3.14
846 867 3.954200 TGAAAAGGATGAGCTGCATACA 58.046 40.909 1.02 0.00 40.55 2.29
847 868 4.529897 TGAAAAGGATGAGCTGCATACAT 58.470 39.130 1.02 4.57 40.55 2.29
848 869 4.337274 TGAAAAGGATGAGCTGCATACATG 59.663 41.667 1.02 0.00 40.55 3.21
885 913 5.529800 AGCAGTCGTAAACCATTTTACACTT 59.470 36.000 7.78 0.00 45.16 3.16
890 918 8.073768 AGTCGTAAACCATTTTACACTTGAATG 58.926 33.333 7.78 0.00 45.16 2.67
988 1016 4.367450 GCAGTTGTTACATTTGCAAAGGA 58.633 39.130 28.81 9.87 34.99 3.36
998 1026 5.058490 ACATTTGCAAAGGACAAATTCTGG 58.942 37.500 28.81 1.49 43.42 3.86
1027 1055 4.013267 ACCACTCAGAAAGTTGATCCAG 57.987 45.455 0.00 0.00 35.45 3.86
1028 1056 3.244700 ACCACTCAGAAAGTTGATCCAGG 60.245 47.826 0.00 0.00 35.45 4.45
1175 1203 6.420913 TCATCTTATACAGGGAAGGTAAGC 57.579 41.667 0.00 0.00 0.00 3.09
1197 1225 2.584835 TTTACCATTCTGCACTGGCT 57.415 45.000 5.35 0.00 41.91 4.75
1265 1294 6.362283 CCTTTTGTTTCACATATTTGACGGTC 59.638 38.462 0.00 0.00 0.00 4.79
1369 1398 3.236003 GAGCCGAACAGGACCGGTT 62.236 63.158 9.42 9.99 46.84 4.44
1399 1428 4.282195 GCCTATAAGCCTAAGAAGCTCTCA 59.718 45.833 0.00 0.00 40.49 3.27
1424 1453 6.670027 ACTAGAGGATGAACTCAAGGTAATGT 59.330 38.462 0.00 0.00 39.97 2.71
1426 1455 7.496346 AGAGGATGAACTCAAGGTAATGTTA 57.504 36.000 0.00 0.00 39.97 2.41
1438 1467 8.165239 TCAAGGTAATGTTATGTTCATATGCC 57.835 34.615 0.00 0.00 0.00 4.40
1439 1468 7.777440 TCAAGGTAATGTTATGTTCATATGCCA 59.223 33.333 0.00 0.00 0.00 4.92
1451 1480 5.304101 TGTTCATATGCCAAAGAAACAAGGT 59.696 36.000 0.00 0.00 0.00 3.50
1460 1489 4.053295 CAAAGAAACAAGGTCTGCCATTG 58.947 43.478 0.00 0.00 37.19 2.82
1479 1508 6.457355 CCATTGTTTTTCATGATTGGTCTGA 58.543 36.000 0.00 0.00 0.00 3.27
1493 1522 1.408702 GGTCTGACTGATGAGCTCTCC 59.591 57.143 16.19 7.12 0.00 3.71
1511 1565 3.117322 TCTCCCTCTCTCCCTCTGTATTG 60.117 52.174 0.00 0.00 0.00 1.90
1513 1567 3.012959 TCCCTCTCTCCCTCTGTATTGTT 59.987 47.826 0.00 0.00 0.00 2.83
1602 1656 2.218603 ACAAGTGAAGTAAAGCACCGG 58.781 47.619 0.00 0.00 35.67 5.28
1623 1677 3.391296 GGTTATCATGCTAAGGAGTGGGA 59.609 47.826 0.00 0.00 0.00 4.37
1691 1746 0.036010 AGTTCCTTGGGATGCTGTCG 60.036 55.000 0.00 0.00 0.00 4.35
1698 1753 0.396435 TGGGATGCTGTCGAAGTGTT 59.604 50.000 0.00 0.00 0.00 3.32
1711 1766 8.391106 GCTGTCGAAGTGTTAAAATGAGATTAT 58.609 33.333 0.00 0.00 0.00 1.28
1783 1838 4.755629 CGAGACTTAGGTCGATGATCCTTA 59.244 45.833 0.00 0.00 46.29 2.69
1830 1892 6.327365 TCATCTTTGTAGCAATAGGAGATGGA 59.673 38.462 15.40 5.89 39.44 3.41
1832 1894 4.322080 TTGTAGCAATAGGAGATGGACG 57.678 45.455 0.00 0.00 0.00 4.79
1889 1951 2.167693 AGTTGATCGAATACCGCCTTCA 59.832 45.455 0.00 0.00 38.37 3.02
1917 1983 5.186797 TCAAGGGGCCAATAAATTGTAACAG 59.813 40.000 4.39 0.00 36.06 3.16
1958 2024 7.760794 TGAACAATCAGATTTTGTATGCCATTC 59.239 33.333 0.00 0.00 36.32 2.67
1992 2058 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
1993 2059 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
1994 2060 5.269991 TCCCTCCGTCCCATAATATAAGAG 58.730 45.833 0.00 0.00 0.00 2.85
1995 2061 4.406003 CCCTCCGTCCCATAATATAAGAGG 59.594 50.000 0.00 0.00 38.47 3.69
1996 2062 5.269991 CCTCCGTCCCATAATATAAGAGGA 58.730 45.833 0.00 0.00 40.69 3.71
1997 2063 5.361285 CCTCCGTCCCATAATATAAGAGGAG 59.639 48.000 0.00 0.00 40.69 3.69
1998 2064 4.710375 TCCGTCCCATAATATAAGAGGAGC 59.290 45.833 0.00 0.00 0.00 4.70
1999 2065 4.141914 CCGTCCCATAATATAAGAGGAGCC 60.142 50.000 0.00 0.00 0.00 4.70
2000 2066 4.466370 CGTCCCATAATATAAGAGGAGCCA 59.534 45.833 0.00 0.00 0.00 4.75
2001 2067 5.394663 CGTCCCATAATATAAGAGGAGCCAG 60.395 48.000 0.00 0.00 0.00 4.85
2002 2068 5.721960 GTCCCATAATATAAGAGGAGCCAGA 59.278 44.000 0.00 0.00 0.00 3.86
2003 2069 6.385467 GTCCCATAATATAAGAGGAGCCAGAT 59.615 42.308 0.00 0.00 0.00 2.90
2004 2070 6.613271 TCCCATAATATAAGAGGAGCCAGATC 59.387 42.308 0.00 0.00 0.00 2.75
2005 2071 6.183361 CCCATAATATAAGAGGAGCCAGATCC 60.183 46.154 0.00 0.00 39.89 3.36
2014 2080 3.399440 GGAGCCAGATCCTCTAACATG 57.601 52.381 0.00 0.00 36.35 3.21
2015 2081 2.549778 GGAGCCAGATCCTCTAACATGC 60.550 54.545 0.00 0.00 36.35 4.06
2016 2082 2.368221 GAGCCAGATCCTCTAACATGCT 59.632 50.000 0.00 0.00 0.00 3.79
2017 2083 2.368221 AGCCAGATCCTCTAACATGCTC 59.632 50.000 0.00 0.00 0.00 4.26
2018 2084 2.103771 GCCAGATCCTCTAACATGCTCA 59.896 50.000 0.00 0.00 0.00 4.26
2019 2085 3.432749 GCCAGATCCTCTAACATGCTCAA 60.433 47.826 0.00 0.00 0.00 3.02
2020 2086 4.378774 CCAGATCCTCTAACATGCTCAAG 58.621 47.826 0.00 0.00 0.00 3.02
2021 2087 4.378774 CAGATCCTCTAACATGCTCAAGG 58.621 47.826 0.00 0.00 0.00 3.61
2022 2088 4.100653 CAGATCCTCTAACATGCTCAAGGA 59.899 45.833 9.23 9.23 37.33 3.36
2023 2089 4.718774 AGATCCTCTAACATGCTCAAGGAA 59.281 41.667 10.47 0.00 36.56 3.36
2024 2090 4.908601 TCCTCTAACATGCTCAAGGAAA 57.091 40.909 5.32 0.00 30.19 3.13
2025 2091 4.836825 TCCTCTAACATGCTCAAGGAAAG 58.163 43.478 5.32 0.00 30.19 2.62
2026 2092 4.287067 TCCTCTAACATGCTCAAGGAAAGT 59.713 41.667 5.32 0.00 30.19 2.66
2027 2093 4.633565 CCTCTAACATGCTCAAGGAAAGTC 59.366 45.833 0.00 0.00 0.00 3.01
2028 2094 5.227569 TCTAACATGCTCAAGGAAAGTCA 57.772 39.130 0.00 0.00 0.00 3.41
2029 2095 4.997395 TCTAACATGCTCAAGGAAAGTCAC 59.003 41.667 0.00 0.00 0.00 3.67
2030 2096 3.498774 ACATGCTCAAGGAAAGTCACT 57.501 42.857 0.00 0.00 0.00 3.41
2031 2097 3.144506 ACATGCTCAAGGAAAGTCACTG 58.855 45.455 0.00 0.00 0.00 3.66
2032 2098 3.181451 ACATGCTCAAGGAAAGTCACTGA 60.181 43.478 0.00 0.00 0.00 3.41
2033 2099 3.117491 TGCTCAAGGAAAGTCACTGAG 57.883 47.619 0.00 0.00 0.00 3.35
2034 2100 1.803555 GCTCAAGGAAAGTCACTGAGC 59.196 52.381 6.61 6.61 40.05 4.26
2035 2101 2.549778 GCTCAAGGAAAGTCACTGAGCT 60.550 50.000 13.63 0.00 42.56 4.09
2036 2102 3.306364 GCTCAAGGAAAGTCACTGAGCTA 60.306 47.826 13.63 0.00 42.56 3.32
2037 2103 4.493547 CTCAAGGAAAGTCACTGAGCTAG 58.506 47.826 0.00 0.00 0.00 3.42
2038 2104 4.152647 TCAAGGAAAGTCACTGAGCTAGA 58.847 43.478 0.00 0.00 0.00 2.43
2039 2105 4.219507 TCAAGGAAAGTCACTGAGCTAGAG 59.780 45.833 0.00 0.00 0.00 2.43
2040 2106 3.773560 AGGAAAGTCACTGAGCTAGAGT 58.226 45.455 0.00 0.00 0.00 3.24
2041 2107 3.509575 AGGAAAGTCACTGAGCTAGAGTG 59.490 47.826 16.16 16.16 41.96 3.51
2042 2108 3.367910 GGAAAGTCACTGAGCTAGAGTGG 60.368 52.174 20.16 6.89 41.11 4.00
2043 2109 2.595750 AGTCACTGAGCTAGAGTGGT 57.404 50.000 20.16 9.34 41.11 4.16
2044 2110 2.166829 AGTCACTGAGCTAGAGTGGTG 58.833 52.381 20.16 8.88 41.11 4.17
2045 2111 1.889829 GTCACTGAGCTAGAGTGGTGT 59.110 52.381 20.16 0.00 41.11 4.16
2046 2112 2.297597 GTCACTGAGCTAGAGTGGTGTT 59.702 50.000 20.16 0.00 41.11 3.32
2047 2113 2.965831 TCACTGAGCTAGAGTGGTGTTT 59.034 45.455 20.16 0.00 41.11 2.83
2048 2114 3.062763 CACTGAGCTAGAGTGGTGTTTG 58.937 50.000 14.94 0.00 37.72 2.93
2049 2115 2.700897 ACTGAGCTAGAGTGGTGTTTGT 59.299 45.455 0.00 0.00 0.00 2.83
2050 2116 3.062763 CTGAGCTAGAGTGGTGTTTGTG 58.937 50.000 0.00 0.00 0.00 3.33
2051 2117 2.434336 TGAGCTAGAGTGGTGTTTGTGT 59.566 45.455 0.00 0.00 0.00 3.72
2052 2118 3.639561 TGAGCTAGAGTGGTGTTTGTGTA 59.360 43.478 0.00 0.00 0.00 2.90
2053 2119 4.100344 TGAGCTAGAGTGGTGTTTGTGTAA 59.900 41.667 0.00 0.00 0.00 2.41
2054 2120 5.031066 AGCTAGAGTGGTGTTTGTGTAAA 57.969 39.130 0.00 0.00 0.00 2.01
2055 2121 5.433526 AGCTAGAGTGGTGTTTGTGTAAAA 58.566 37.500 0.00 0.00 0.00 1.52
2056 2122 5.883673 AGCTAGAGTGGTGTTTGTGTAAAAA 59.116 36.000 0.00 0.00 0.00 1.94
2075 2141 5.388599 AAAAAGAGAAGGAAAGTCAGGGA 57.611 39.130 0.00 0.00 0.00 4.20
2076 2142 4.632327 AAAGAGAAGGAAAGTCAGGGAG 57.368 45.455 0.00 0.00 0.00 4.30
2077 2143 1.905894 AGAGAAGGAAAGTCAGGGAGC 59.094 52.381 0.00 0.00 0.00 4.70
2078 2144 1.905894 GAGAAGGAAAGTCAGGGAGCT 59.094 52.381 0.00 0.00 0.00 4.09
2079 2145 2.304470 GAGAAGGAAAGTCAGGGAGCTT 59.696 50.000 0.00 0.00 0.00 3.74
2080 2146 3.515901 GAGAAGGAAAGTCAGGGAGCTTA 59.484 47.826 0.00 0.00 0.00 3.09
2081 2147 4.107820 AGAAGGAAAGTCAGGGAGCTTAT 58.892 43.478 0.00 0.00 0.00 1.73
2082 2148 3.922171 AGGAAAGTCAGGGAGCTTATG 57.078 47.619 0.00 0.00 0.00 1.90
2083 2149 3.454858 AGGAAAGTCAGGGAGCTTATGA 58.545 45.455 0.00 0.00 0.00 2.15
2084 2150 3.846588 AGGAAAGTCAGGGAGCTTATGAA 59.153 43.478 0.00 0.00 0.00 2.57
2085 2151 4.289672 AGGAAAGTCAGGGAGCTTATGAAA 59.710 41.667 0.00 0.00 0.00 2.69
2086 2152 5.044550 AGGAAAGTCAGGGAGCTTATGAAAT 60.045 40.000 0.00 0.00 0.00 2.17
2087 2153 5.654209 GGAAAGTCAGGGAGCTTATGAAATT 59.346 40.000 0.00 0.00 0.00 1.82
2088 2154 6.405176 GGAAAGTCAGGGAGCTTATGAAATTG 60.405 42.308 0.00 0.00 0.00 2.32
2089 2155 5.441718 AGTCAGGGAGCTTATGAAATTGA 57.558 39.130 0.00 0.00 0.00 2.57
2090 2156 5.819991 AGTCAGGGAGCTTATGAAATTGAA 58.180 37.500 0.00 0.00 0.00 2.69
2091 2157 6.248433 AGTCAGGGAGCTTATGAAATTGAAA 58.752 36.000 0.00 0.00 0.00 2.69
2092 2158 6.894103 AGTCAGGGAGCTTATGAAATTGAAAT 59.106 34.615 0.00 0.00 0.00 2.17
2093 2159 8.055181 AGTCAGGGAGCTTATGAAATTGAAATA 58.945 33.333 0.00 0.00 0.00 1.40
2094 2160 8.854117 GTCAGGGAGCTTATGAAATTGAAATAT 58.146 33.333 0.00 0.00 0.00 1.28
2095 2161 9.425248 TCAGGGAGCTTATGAAATTGAAATATT 57.575 29.630 0.00 0.00 0.00 1.28
2150 2216 9.665264 ATTGAAACGAGTCTTCTAAAATTGAAC 57.335 29.630 0.00 0.00 0.00 3.18
2151 2217 8.433421 TGAAACGAGTCTTCTAAAATTGAACT 57.567 30.769 0.00 0.00 0.00 3.01
2152 2218 8.889717 TGAAACGAGTCTTCTAAAATTGAACTT 58.110 29.630 0.00 0.00 0.00 2.66
2153 2219 9.159470 GAAACGAGTCTTCTAAAATTGAACTTG 57.841 33.333 0.00 0.00 0.00 3.16
2154 2220 7.190920 ACGAGTCTTCTAAAATTGAACTTGG 57.809 36.000 0.00 0.00 0.00 3.61
2155 2221 6.990349 ACGAGTCTTCTAAAATTGAACTTGGA 59.010 34.615 0.00 0.00 0.00 3.53
2156 2222 7.497909 ACGAGTCTTCTAAAATTGAACTTGGAA 59.502 33.333 0.00 0.00 0.00 3.53
2157 2223 8.507249 CGAGTCTTCTAAAATTGAACTTGGAAT 58.493 33.333 0.00 0.00 0.00 3.01
2158 2224 9.617975 GAGTCTTCTAAAATTGAACTTGGAATG 57.382 33.333 0.00 0.00 0.00 2.67
2159 2225 9.136323 AGTCTTCTAAAATTGAACTTGGAATGT 57.864 29.630 0.00 0.00 0.00 2.71
2160 2226 9.399403 GTCTTCTAAAATTGAACTTGGAATGTC 57.601 33.333 0.00 0.00 0.00 3.06
2161 2227 9.130661 TCTTCTAAAATTGAACTTGGAATGTCA 57.869 29.630 0.00 0.00 0.00 3.58
2162 2228 9.185192 CTTCTAAAATTGAACTTGGAATGTCAC 57.815 33.333 0.00 0.00 0.00 3.67
2163 2229 8.231692 TCTAAAATTGAACTTGGAATGTCACA 57.768 30.769 0.00 0.00 0.00 3.58
2164 2230 8.690884 TCTAAAATTGAACTTGGAATGTCACAA 58.309 29.630 0.00 0.00 0.00 3.33
2165 2231 9.311916 CTAAAATTGAACTTGGAATGTCACAAA 57.688 29.630 0.00 0.00 0.00 2.83
2166 2232 8.735692 AAAATTGAACTTGGAATGTCACAAAT 57.264 26.923 0.00 0.00 0.00 2.32
2167 2233 8.735692 AAATTGAACTTGGAATGTCACAAATT 57.264 26.923 0.00 0.00 0.00 1.82
2168 2234 7.718272 ATTGAACTTGGAATGTCACAAATTG 57.282 32.000 0.00 0.00 0.00 2.32
2169 2235 6.462552 TGAACTTGGAATGTCACAAATTGA 57.537 33.333 0.00 0.00 0.00 2.57
2170 2236 6.871844 TGAACTTGGAATGTCACAAATTGAA 58.128 32.000 0.00 0.00 35.39 2.69
2171 2237 7.326454 TGAACTTGGAATGTCACAAATTGAAA 58.674 30.769 0.00 0.00 35.39 2.69
2172 2238 7.986320 TGAACTTGGAATGTCACAAATTGAAAT 59.014 29.630 0.00 0.00 35.39 2.17
2173 2239 8.735692 AACTTGGAATGTCACAAATTGAAATT 57.264 26.923 0.00 0.00 43.89 1.82
2174 2240 8.145316 ACTTGGAATGTCACAAATTGAAATTG 57.855 30.769 0.00 0.00 41.61 2.32
2175 2241 7.986320 ACTTGGAATGTCACAAATTGAAATTGA 59.014 29.630 0.00 0.00 41.61 2.57
2176 2242 8.905660 TTGGAATGTCACAAATTGAAATTGAT 57.094 26.923 0.00 0.00 41.61 2.57
2177 2243 8.537049 TGGAATGTCACAAATTGAAATTGATC 57.463 30.769 0.00 0.00 41.61 2.92
2178 2244 8.369424 TGGAATGTCACAAATTGAAATTGATCT 58.631 29.630 0.00 0.00 41.61 2.75
2179 2245 9.211485 GGAATGTCACAAATTGAAATTGATCTT 57.789 29.630 0.00 0.00 41.61 2.40
2197 2263 8.816640 TTGATCTTTTAGAAATTGAAACCTGC 57.183 30.769 0.00 0.00 0.00 4.85
2198 2264 7.378181 TGATCTTTTAGAAATTGAAACCTGCC 58.622 34.615 0.00 0.00 0.00 4.85
2199 2265 6.976934 TCTTTTAGAAATTGAAACCTGCCT 57.023 33.333 0.00 0.00 0.00 4.75
2200 2266 7.360113 TCTTTTAGAAATTGAAACCTGCCTT 57.640 32.000 0.00 0.00 0.00 4.35
2201 2267 7.791029 TCTTTTAGAAATTGAAACCTGCCTTT 58.209 30.769 0.00 0.00 0.00 3.11
2202 2268 8.264347 TCTTTTAGAAATTGAAACCTGCCTTTT 58.736 29.630 0.00 0.00 0.00 2.27
2203 2269 7.784633 TTTAGAAATTGAAACCTGCCTTTTG 57.215 32.000 0.00 0.00 0.00 2.44
2204 2270 5.612725 AGAAATTGAAACCTGCCTTTTGA 57.387 34.783 0.00 0.00 0.00 2.69
2205 2271 5.988287 AGAAATTGAAACCTGCCTTTTGAA 58.012 33.333 0.00 0.00 0.00 2.69
2206 2272 6.413892 AGAAATTGAAACCTGCCTTTTGAAA 58.586 32.000 0.00 0.00 0.00 2.69
2207 2273 6.883756 AGAAATTGAAACCTGCCTTTTGAAAA 59.116 30.769 0.00 0.00 0.00 2.29
2208 2274 7.557358 AGAAATTGAAACCTGCCTTTTGAAAAT 59.443 29.630 0.00 0.00 0.00 1.82
2209 2275 7.643569 AATTGAAACCTGCCTTTTGAAAATT 57.356 28.000 0.00 0.00 0.00 1.82
2210 2276 6.434018 TTGAAACCTGCCTTTTGAAAATTG 57.566 33.333 0.00 0.00 0.00 2.32
2211 2277 5.738909 TGAAACCTGCCTTTTGAAAATTGA 58.261 33.333 0.00 0.00 0.00 2.57
2212 2278 6.176183 TGAAACCTGCCTTTTGAAAATTGAA 58.824 32.000 0.00 0.00 0.00 2.69
2213 2279 6.656693 TGAAACCTGCCTTTTGAAAATTGAAA 59.343 30.769 0.00 0.00 0.00 2.69
2214 2280 7.338957 TGAAACCTGCCTTTTGAAAATTGAAAT 59.661 29.630 0.00 0.00 0.00 2.17
2215 2281 8.744568 AAACCTGCCTTTTGAAAATTGAAATA 57.255 26.923 0.00 0.00 0.00 1.40
2216 2282 8.744568 AACCTGCCTTTTGAAAATTGAAATAA 57.255 26.923 0.00 0.00 0.00 1.40
2217 2283 8.382030 ACCTGCCTTTTGAAAATTGAAATAAG 57.618 30.769 0.00 0.00 0.00 1.73
2218 2284 7.041167 ACCTGCCTTTTGAAAATTGAAATAAGC 60.041 33.333 0.00 0.00 0.00 3.09
2219 2285 7.041235 CCTGCCTTTTGAAAATTGAAATAAGCA 60.041 33.333 0.00 0.00 0.00 3.91
2220 2286 7.638134 TGCCTTTTGAAAATTGAAATAAGCAC 58.362 30.769 0.00 0.00 0.00 4.40
2221 2287 7.498570 TGCCTTTTGAAAATTGAAATAAGCACT 59.501 29.630 0.00 0.00 0.00 4.40
2222 2288 7.799914 GCCTTTTGAAAATTGAAATAAGCACTG 59.200 33.333 0.00 0.00 0.00 3.66
2223 2289 8.829612 CCTTTTGAAAATTGAAATAAGCACTGT 58.170 29.630 0.00 0.00 0.00 3.55
2226 2292 8.939201 TTGAAAATTGAAATAAGCACTGTTCA 57.061 26.923 0.00 0.00 0.00 3.18
2227 2293 9.545105 TTGAAAATTGAAATAAGCACTGTTCAT 57.455 25.926 0.00 0.00 30.51 2.57
2228 2294 8.980610 TGAAAATTGAAATAAGCACTGTTCATG 58.019 29.630 0.00 0.00 30.51 3.07
2229 2295 7.894376 AAATTGAAATAAGCACTGTTCATGG 57.106 32.000 0.00 0.00 30.51 3.66
2230 2296 5.389859 TTGAAATAAGCACTGTTCATGGG 57.610 39.130 0.00 0.00 30.51 4.00
2231 2297 3.193267 TGAAATAAGCACTGTTCATGGGC 59.807 43.478 0.00 0.00 0.00 5.36
2232 2298 2.814805 ATAAGCACTGTTCATGGGCT 57.185 45.000 0.00 0.00 36.13 5.19
2233 2299 3.931907 ATAAGCACTGTTCATGGGCTA 57.068 42.857 0.00 0.00 33.80 3.93
2234 2300 2.584835 AAGCACTGTTCATGGGCTAA 57.415 45.000 0.00 0.00 33.80 3.09
2235 2301 2.119801 AGCACTGTTCATGGGCTAAG 57.880 50.000 0.00 0.00 32.09 2.18
2236 2302 1.630369 AGCACTGTTCATGGGCTAAGA 59.370 47.619 0.00 0.00 32.09 2.10
2237 2303 2.012673 GCACTGTTCATGGGCTAAGAG 58.987 52.381 0.00 0.00 0.00 2.85
2238 2304 2.616510 GCACTGTTCATGGGCTAAGAGT 60.617 50.000 0.00 0.00 30.00 3.24
2239 2305 3.005554 CACTGTTCATGGGCTAAGAGTG 58.994 50.000 7.48 7.48 39.61 3.51
2240 2306 2.906389 ACTGTTCATGGGCTAAGAGTGA 59.094 45.455 0.00 0.00 28.97 3.41
2241 2307 3.327757 ACTGTTCATGGGCTAAGAGTGAA 59.672 43.478 0.00 0.00 28.97 3.18
2242 2308 4.202461 ACTGTTCATGGGCTAAGAGTGAAA 60.202 41.667 0.00 0.00 31.38 2.69
2243 2309 4.326826 TGTTCATGGGCTAAGAGTGAAAG 58.673 43.478 0.00 0.00 31.38 2.62
2244 2310 4.041567 TGTTCATGGGCTAAGAGTGAAAGA 59.958 41.667 0.00 0.00 31.38 2.52
2245 2311 4.908601 TCATGGGCTAAGAGTGAAAGAA 57.091 40.909 0.00 0.00 0.00 2.52
2246 2312 5.241403 TCATGGGCTAAGAGTGAAAGAAA 57.759 39.130 0.00 0.00 0.00 2.52
2247 2313 5.248640 TCATGGGCTAAGAGTGAAAGAAAG 58.751 41.667 0.00 0.00 0.00 2.62
2248 2314 4.706842 TGGGCTAAGAGTGAAAGAAAGT 57.293 40.909 0.00 0.00 0.00 2.66
2249 2315 5.048846 TGGGCTAAGAGTGAAAGAAAGTT 57.951 39.130 0.00 0.00 0.00 2.66
2250 2316 6.182507 TGGGCTAAGAGTGAAAGAAAGTTA 57.817 37.500 0.00 0.00 0.00 2.24
2251 2317 6.231211 TGGGCTAAGAGTGAAAGAAAGTTAG 58.769 40.000 0.00 0.00 0.00 2.34
2252 2318 5.644206 GGGCTAAGAGTGAAAGAAAGTTAGG 59.356 44.000 0.00 0.00 0.00 2.69
2253 2319 6.231951 GGCTAAGAGTGAAAGAAAGTTAGGT 58.768 40.000 0.00 0.00 0.00 3.08
2254 2320 6.711194 GGCTAAGAGTGAAAGAAAGTTAGGTT 59.289 38.462 0.00 0.00 0.00 3.50
2255 2321 7.876582 GGCTAAGAGTGAAAGAAAGTTAGGTTA 59.123 37.037 0.00 0.00 0.00 2.85
2256 2322 8.710551 GCTAAGAGTGAAAGAAAGTTAGGTTAC 58.289 37.037 0.00 0.00 0.00 2.50
2257 2323 9.984190 CTAAGAGTGAAAGAAAGTTAGGTTACT 57.016 33.333 0.00 0.00 0.00 2.24
2258 2324 8.664211 AAGAGTGAAAGAAAGTTAGGTTACTG 57.336 34.615 0.00 0.00 0.00 2.74
2259 2325 7.793036 AGAGTGAAAGAAAGTTAGGTTACTGT 58.207 34.615 0.00 0.00 0.00 3.55
2260 2326 8.921205 AGAGTGAAAGAAAGTTAGGTTACTGTA 58.079 33.333 0.00 0.00 0.00 2.74
2261 2327 9.194271 GAGTGAAAGAAAGTTAGGTTACTGTAG 57.806 37.037 0.00 0.00 0.00 2.74
2262 2328 7.656542 AGTGAAAGAAAGTTAGGTTACTGTAGC 59.343 37.037 0.00 0.00 0.00 3.58
2263 2329 7.656542 GTGAAAGAAAGTTAGGTTACTGTAGCT 59.343 37.037 1.71 0.00 0.00 3.32
2264 2330 8.208903 TGAAAGAAAGTTAGGTTACTGTAGCTT 58.791 33.333 0.00 0.00 0.00 3.74
2265 2331 9.702494 GAAAGAAAGTTAGGTTACTGTAGCTTA 57.298 33.333 0.00 0.00 0.00 3.09
2266 2332 9.486497 AAAGAAAGTTAGGTTACTGTAGCTTAC 57.514 33.333 0.00 1.06 0.00 2.34
2267 2333 7.609960 AGAAAGTTAGGTTACTGTAGCTTACC 58.390 38.462 0.00 0.41 0.00 2.85
2268 2334 7.454066 AGAAAGTTAGGTTACTGTAGCTTACCT 59.546 37.037 12.26 12.26 41.80 3.08
2269 2335 6.527057 AGTTAGGTTACTGTAGCTTACCTG 57.473 41.667 15.81 0.00 39.46 4.00
2270 2336 6.251471 AGTTAGGTTACTGTAGCTTACCTGA 58.749 40.000 15.81 7.67 39.46 3.86
2271 2337 6.723052 AGTTAGGTTACTGTAGCTTACCTGAA 59.277 38.462 15.81 6.67 39.46 3.02
2272 2338 7.399478 AGTTAGGTTACTGTAGCTTACCTGAAT 59.601 37.037 15.81 7.10 39.46 2.57
2273 2339 6.622427 AGGTTACTGTAGCTTACCTGAATT 57.378 37.500 7.88 0.00 37.80 2.17
2274 2340 6.641474 AGGTTACTGTAGCTTACCTGAATTC 58.359 40.000 7.88 0.00 37.80 2.17
2275 2341 5.816258 GGTTACTGTAGCTTACCTGAATTCC 59.184 44.000 2.27 0.00 0.00 3.01
2276 2342 4.489306 ACTGTAGCTTACCTGAATTCCC 57.511 45.455 2.27 0.00 0.00 3.97
2277 2343 4.104831 ACTGTAGCTTACCTGAATTCCCT 58.895 43.478 2.27 0.00 0.00 4.20
2278 2344 4.536489 ACTGTAGCTTACCTGAATTCCCTT 59.464 41.667 2.27 0.00 0.00 3.95
2279 2345 5.014228 ACTGTAGCTTACCTGAATTCCCTTT 59.986 40.000 2.27 0.00 0.00 3.11
2280 2346 5.253330 TGTAGCTTACCTGAATTCCCTTTG 58.747 41.667 2.27 0.00 0.00 2.77
2281 2347 4.657814 AGCTTACCTGAATTCCCTTTGA 57.342 40.909 2.27 0.00 0.00 2.69
2282 2348 4.998051 AGCTTACCTGAATTCCCTTTGAA 58.002 39.130 2.27 0.00 37.38 2.69
2283 2349 5.583932 AGCTTACCTGAATTCCCTTTGAAT 58.416 37.500 2.27 0.00 45.75 2.57
2284 2350 5.420104 AGCTTACCTGAATTCCCTTTGAATG 59.580 40.000 2.27 0.00 42.97 2.67
2285 2351 5.185828 GCTTACCTGAATTCCCTTTGAATGT 59.814 40.000 2.27 0.00 42.97 2.71
2286 2352 6.295292 GCTTACCTGAATTCCCTTTGAATGTT 60.295 38.462 2.27 0.00 42.97 2.71
2287 2353 5.728637 ACCTGAATTCCCTTTGAATGTTC 57.271 39.130 2.27 0.00 42.97 3.18
2288 2354 4.218417 ACCTGAATTCCCTTTGAATGTTCG 59.782 41.667 2.27 0.00 42.97 3.95
2289 2355 4.380867 CCTGAATTCCCTTTGAATGTTCGG 60.381 45.833 2.27 0.00 42.97 4.30
2290 2356 4.402829 TGAATTCCCTTTGAATGTTCGGA 58.597 39.130 2.27 0.00 42.97 4.55
2291 2357 5.016173 TGAATTCCCTTTGAATGTTCGGAT 58.984 37.500 2.27 0.00 42.97 4.18
2292 2358 5.125417 TGAATTCCCTTTGAATGTTCGGATC 59.875 40.000 2.27 0.00 42.97 3.36
2293 2359 2.999331 TCCCTTTGAATGTTCGGATCC 58.001 47.619 0.00 0.00 0.00 3.36
2294 2360 2.307392 TCCCTTTGAATGTTCGGATCCA 59.693 45.455 13.41 0.00 0.00 3.41
2295 2361 2.684881 CCCTTTGAATGTTCGGATCCAG 59.315 50.000 13.41 4.86 0.00 3.86
2296 2362 2.098117 CCTTTGAATGTTCGGATCCAGC 59.902 50.000 13.41 1.23 0.00 4.85
2297 2363 2.787473 TTGAATGTTCGGATCCAGCT 57.213 45.000 13.41 0.00 0.00 4.24
2298 2364 2.315925 TGAATGTTCGGATCCAGCTC 57.684 50.000 13.41 0.00 0.00 4.09
2299 2365 1.134401 TGAATGTTCGGATCCAGCTCC 60.134 52.381 13.41 0.00 0.00 4.70
2300 2366 0.911769 AATGTTCGGATCCAGCTCCA 59.088 50.000 13.41 0.75 34.78 3.86
2301 2367 0.911769 ATGTTCGGATCCAGCTCCAA 59.088 50.000 13.41 0.00 34.78 3.53
2302 2368 0.911769 TGTTCGGATCCAGCTCCAAT 59.088 50.000 13.41 0.00 34.78 3.16
2303 2369 2.115427 TGTTCGGATCCAGCTCCAATA 58.885 47.619 13.41 0.00 34.78 1.90
2304 2370 2.705658 TGTTCGGATCCAGCTCCAATAT 59.294 45.455 13.41 0.00 34.78 1.28
2305 2371 3.901222 TGTTCGGATCCAGCTCCAATATA 59.099 43.478 13.41 0.00 34.78 0.86
2306 2372 4.346709 TGTTCGGATCCAGCTCCAATATAA 59.653 41.667 13.41 0.00 34.78 0.98
2307 2373 4.808414 TCGGATCCAGCTCCAATATAAG 57.192 45.455 13.41 0.00 34.78 1.73
2335 2401 2.987413 TGGCACAAAACTCTAATGCG 57.013 45.000 0.00 0.00 37.15 4.73
2336 2402 2.226330 TGGCACAAAACTCTAATGCGT 58.774 42.857 0.00 0.00 37.15 5.24
2337 2403 2.225491 TGGCACAAAACTCTAATGCGTC 59.775 45.455 0.00 0.00 37.15 5.19
2366 2433 6.308766 GTGAACAATCAGATTTTGTATGCCAC 59.691 38.462 0.00 0.00 36.32 5.01
2440 2507 2.159085 GGACGGAGGGAGTAATCAGTTG 60.159 54.545 0.00 0.00 0.00 3.16
2453 2520 0.529773 TCAGTTGTGTCACGAGCACC 60.530 55.000 0.00 0.00 36.11 5.01
2454 2521 0.809636 CAGTTGTGTCACGAGCACCA 60.810 55.000 0.00 0.00 36.11 4.17
2455 2522 0.530650 AGTTGTGTCACGAGCACCAG 60.531 55.000 0.00 0.00 36.11 4.00
2465 2532 0.523072 CGAGCACCAGACAAAATGGG 59.477 55.000 0.00 0.00 42.48 4.00
2472 2539 4.797275 GCACCAGACAAAATGGGAAGAAAG 60.797 45.833 0.00 0.00 42.48 2.62
2475 2542 5.069119 ACCAGACAAAATGGGAAGAAAGTTC 59.931 40.000 0.00 0.00 42.48 3.01
2478 2545 7.014230 CCAGACAAAATGGGAAGAAAGTTCTTA 59.986 37.037 6.29 0.00 46.84 2.10
2484 2551 6.943899 ATGGGAAGAAAGTTCTTAGAGACT 57.056 37.500 6.29 0.00 46.84 3.24
2489 2556 6.127563 GGAAGAAAGTTCTTAGAGACTCCGAT 60.128 42.308 6.29 0.00 46.84 4.18
2493 2560 2.691011 GTTCTTAGAGACTCCGATGCCT 59.309 50.000 0.00 0.00 0.00 4.75
2508 2575 2.682893 GCCTGTATTCGGCTGTCAG 58.317 57.895 0.00 0.00 44.17 3.51
2515 2582 1.198713 ATTCGGCTGTCAGATCACCT 58.801 50.000 3.32 0.00 0.00 4.00
2555 3817 1.009335 GCACAAACGTTTCGTCCCC 60.009 57.895 11.37 1.28 39.99 4.81
2556 3818 1.716826 GCACAAACGTTTCGTCCCCA 61.717 55.000 11.37 0.00 39.99 4.96
2568 3830 4.348684 TCCCCAGGGAAAAGCAGA 57.651 55.556 7.25 0.00 42.05 4.26
2584 3846 3.177228 AGCAGAAACCTAGTGGACTCAT 58.823 45.455 0.00 0.00 37.04 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.789123 CAACGGGGTTAGGCCGGG 62.789 72.222 2.18 0.00 38.44 5.73
19 20 2.319890 ATAGCAACGGGGTTAGGCCG 62.320 60.000 0.00 0.00 38.44 6.13
20 21 0.534427 GATAGCAACGGGGTTAGGCC 60.534 60.000 0.00 0.00 0.00 5.19
21 22 0.534427 GGATAGCAACGGGGTTAGGC 60.534 60.000 0.00 0.00 0.00 3.93
22 23 0.108019 GGGATAGCAACGGGGTTAGG 59.892 60.000 0.00 0.00 0.00 2.69
23 24 0.834612 TGGGATAGCAACGGGGTTAG 59.165 55.000 0.00 0.00 0.00 2.34
24 25 0.834612 CTGGGATAGCAACGGGGTTA 59.165 55.000 0.00 0.00 0.00 2.85
25 26 1.607612 CTGGGATAGCAACGGGGTT 59.392 57.895 0.00 0.00 0.00 4.11
26 27 3.320359 CTGGGATAGCAACGGGGT 58.680 61.111 0.00 0.00 0.00 4.95
35 36 2.125326 TGACGTCGGGCTGGGATAG 61.125 63.158 11.62 0.00 0.00 2.08
36 37 2.043752 TGACGTCGGGCTGGGATA 60.044 61.111 11.62 0.00 0.00 2.59
37 38 3.771160 GTGACGTCGGGCTGGGAT 61.771 66.667 11.62 0.00 0.00 3.85
50 51 1.139058 AGGCATGGATAACTCGGTGAC 59.861 52.381 0.00 0.00 0.00 3.67
51 52 1.496060 AGGCATGGATAACTCGGTGA 58.504 50.000 0.00 0.00 0.00 4.02
52 53 2.332063 AAGGCATGGATAACTCGGTG 57.668 50.000 0.00 0.00 0.00 4.94
53 54 2.421529 GGAAAGGCATGGATAACTCGGT 60.422 50.000 0.00 0.00 0.00 4.69
54 55 2.158755 AGGAAAGGCATGGATAACTCGG 60.159 50.000 0.00 0.00 0.00 4.63
55 56 3.199880 AGGAAAGGCATGGATAACTCG 57.800 47.619 0.00 0.00 0.00 4.18
56 57 3.067320 GCAAGGAAAGGCATGGATAACTC 59.933 47.826 0.00 0.00 0.00 3.01
57 58 3.026694 GCAAGGAAAGGCATGGATAACT 58.973 45.455 0.00 0.00 0.00 2.24
58 59 3.026694 AGCAAGGAAAGGCATGGATAAC 58.973 45.455 0.00 0.00 0.00 1.89
59 60 3.025978 CAGCAAGGAAAGGCATGGATAA 58.974 45.455 0.00 0.00 0.00 1.75
60 61 2.241941 TCAGCAAGGAAAGGCATGGATA 59.758 45.455 0.00 0.00 0.00 2.59
61 62 1.006281 TCAGCAAGGAAAGGCATGGAT 59.994 47.619 0.00 0.00 0.00 3.41
62 63 0.405198 TCAGCAAGGAAAGGCATGGA 59.595 50.000 0.00 0.00 0.00 3.41
63 64 0.529378 GTCAGCAAGGAAAGGCATGG 59.471 55.000 0.00 0.00 0.00 3.66
64 65 1.068055 GTGTCAGCAAGGAAAGGCATG 60.068 52.381 0.00 0.00 0.00 4.06
65 66 1.251251 GTGTCAGCAAGGAAAGGCAT 58.749 50.000 0.00 0.00 0.00 4.40
66 67 0.823356 GGTGTCAGCAAGGAAAGGCA 60.823 55.000 0.00 0.00 0.00 4.75
67 68 0.538287 AGGTGTCAGCAAGGAAAGGC 60.538 55.000 4.59 0.00 0.00 4.35
68 69 1.072965 AGAGGTGTCAGCAAGGAAAGG 59.927 52.381 4.59 0.00 0.00 3.11
69 70 2.149578 CAGAGGTGTCAGCAAGGAAAG 58.850 52.381 4.59 0.00 0.00 2.62
70 71 1.490490 ACAGAGGTGTCAGCAAGGAAA 59.510 47.619 4.59 0.00 26.76 3.13
71 72 1.131638 ACAGAGGTGTCAGCAAGGAA 58.868 50.000 4.59 0.00 26.76 3.36
72 73 1.131638 AACAGAGGTGTCAGCAAGGA 58.868 50.000 4.59 0.00 35.08 3.36
73 74 1.876156 GAAACAGAGGTGTCAGCAAGG 59.124 52.381 4.59 0.00 35.08 3.61
74 75 2.289002 GTGAAACAGAGGTGTCAGCAAG 59.711 50.000 4.59 0.00 41.89 4.01
75 76 2.288666 GTGAAACAGAGGTGTCAGCAA 58.711 47.619 4.59 0.00 41.89 3.91
76 77 1.953559 GTGAAACAGAGGTGTCAGCA 58.046 50.000 4.59 0.00 41.89 4.41
78 79 2.620251 TGGTGAAACAGAGGTGTCAG 57.380 50.000 0.00 0.00 41.89 3.51
79 80 2.849942 CATGGTGAAACAGAGGTGTCA 58.150 47.619 0.00 0.00 38.96 3.58
80 81 1.537202 GCATGGTGAAACAGAGGTGTC 59.463 52.381 0.00 0.00 39.98 3.67
81 82 1.609208 GCATGGTGAAACAGAGGTGT 58.391 50.000 0.00 0.00 39.98 4.16
82 83 0.883833 GGCATGGTGAAACAGAGGTG 59.116 55.000 0.00 0.00 39.98 4.00
83 84 0.606401 CGGCATGGTGAAACAGAGGT 60.606 55.000 0.00 0.00 39.98 3.85
84 85 0.606401 ACGGCATGGTGAAACAGAGG 60.606 55.000 0.00 0.00 39.98 3.69
85 86 0.798776 GACGGCATGGTGAAACAGAG 59.201 55.000 0.00 0.00 39.98 3.35
86 87 0.107643 TGACGGCATGGTGAAACAGA 59.892 50.000 0.00 0.00 39.98 3.41
87 88 0.238289 GTGACGGCATGGTGAAACAG 59.762 55.000 0.00 0.00 39.98 3.16
88 89 1.169661 GGTGACGGCATGGTGAAACA 61.170 55.000 0.00 0.00 39.98 2.83
89 90 1.579429 GGTGACGGCATGGTGAAAC 59.421 57.895 0.00 0.00 0.00 2.78
114 115 2.705658 TCTCTTTCTCTTTGGCAGGACA 59.294 45.455 0.00 0.00 0.00 4.02
119 120 2.289945 GGAGCTCTCTTTCTCTTTGGCA 60.290 50.000 14.64 0.00 0.00 4.92
167 168 2.040544 CAGTGATGGCGGGTTGGAC 61.041 63.158 0.00 0.00 0.00 4.02
173 174 4.864334 GGGCTCAGTGATGGCGGG 62.864 72.222 0.00 0.00 0.00 6.13
190 191 3.400054 GGAGGTCGAGGTTGGGGG 61.400 72.222 0.00 0.00 0.00 5.40
191 192 2.606519 TGGAGGTCGAGGTTGGGG 60.607 66.667 0.00 0.00 0.00 4.96
237 247 0.746659 AGCTGCTGGTGGTTTTTGTC 59.253 50.000 0.00 0.00 0.00 3.18
253 263 2.521708 GGCCAACACCAACCAGCT 60.522 61.111 0.00 0.00 0.00 4.24
309 321 7.118101 ACAGCAAGCATTTTAACACATTAATGG 59.882 33.333 19.37 10.68 30.33 3.16
328 340 7.495606 TCCATGTAAACACATCTATACAGCAAG 59.504 37.037 0.00 0.00 32.31 4.01
329 341 7.334858 TCCATGTAAACACATCTATACAGCAA 58.665 34.615 0.00 0.00 32.31 3.91
330 342 6.883744 TCCATGTAAACACATCTATACAGCA 58.116 36.000 0.00 0.00 32.31 4.41
331 343 7.786178 TTCCATGTAAACACATCTATACAGC 57.214 36.000 0.00 0.00 32.31 4.40
332 344 9.330063 ACATTCCATGTAAACACATCTATACAG 57.670 33.333 0.00 0.00 42.78 2.74
333 345 9.108284 CACATTCCATGTAAACACATCTATACA 57.892 33.333 0.00 0.00 42.70 2.29
334 346 9.325198 TCACATTCCATGTAAACACATCTATAC 57.675 33.333 0.00 0.00 42.70 1.47
336 348 8.985315 ATCACATTCCATGTAAACACATCTAT 57.015 30.769 0.00 0.00 42.70 1.98
337 349 8.267183 AGATCACATTCCATGTAAACACATCTA 58.733 33.333 0.00 0.00 42.70 1.98
338 350 7.066645 CAGATCACATTCCATGTAAACACATCT 59.933 37.037 0.00 0.00 42.70 2.90
339 351 7.066163 TCAGATCACATTCCATGTAAACACATC 59.934 37.037 0.00 0.00 42.70 3.06
340 352 6.885918 TCAGATCACATTCCATGTAAACACAT 59.114 34.615 0.00 0.00 42.70 3.21
341 353 6.237154 TCAGATCACATTCCATGTAAACACA 58.763 36.000 0.00 0.00 42.70 3.72
342 354 6.741992 TCAGATCACATTCCATGTAAACAC 57.258 37.500 0.00 0.00 42.70 3.32
343 355 7.167535 TCTTCAGATCACATTCCATGTAAACA 58.832 34.615 0.00 0.00 42.70 2.83
344 356 7.615582 TCTTCAGATCACATTCCATGTAAAC 57.384 36.000 0.00 0.00 42.70 2.01
345 357 8.048514 TCATCTTCAGATCACATTCCATGTAAA 58.951 33.333 0.00 0.00 35.52 2.01
346 358 7.496920 GTCATCTTCAGATCACATTCCATGTAA 59.503 37.037 0.00 0.00 35.52 2.41
347 359 6.988580 GTCATCTTCAGATCACATTCCATGTA 59.011 38.462 0.00 0.00 35.52 2.29
378 390 6.935167 AGACAAGACTTTGACCAACAATTTT 58.065 32.000 0.00 0.00 38.36 1.82
460 477 1.973515 TCAGCAGTTCAGTCCACAGAT 59.026 47.619 0.00 0.00 0.00 2.90
467 484 8.579682 AATTTAAATGTTTCAGCAGTTCAGTC 57.420 30.769 0.39 0.00 0.00 3.51
522 539 7.376615 CCTCTTAGGGTTAACTATAATGACCG 58.623 42.308 5.42 0.00 0.00 4.79
525 542 6.847567 TGGCCTCTTAGGGTTAACTATAATGA 59.152 38.462 3.32 4.69 35.37 2.57
529 546 8.984112 ATATTGGCCTCTTAGGGTTAACTATA 57.016 34.615 3.32 0.00 35.37 1.31
541 558 8.141298 TGGAATACGATAATATTGGCCTCTTA 57.859 34.615 3.32 0.00 0.00 2.10
559 576 6.533730 TGAATCCACAGTATCCATGGAATAC 58.466 40.000 20.67 19.57 45.47 1.89
578 595 2.030213 GCAATGACTCGACAGCTGAATC 59.970 50.000 23.35 7.57 0.00 2.52
716 733 5.970317 TCACAGCACTCAAATGATCAAAT 57.030 34.783 0.00 0.00 0.00 2.32
826 847 4.856664 CATGTATGCAGCTCATCCTTTTC 58.143 43.478 0.00 0.00 36.63 2.29
844 865 3.822735 ACTGCTCACATTGTTTAGCATGT 59.177 39.130 18.90 16.08 43.53 3.21
846 867 3.125829 CGACTGCTCACATTGTTTAGCAT 59.874 43.478 18.90 11.92 43.53 3.79
847 868 2.480037 CGACTGCTCACATTGTTTAGCA 59.520 45.455 18.00 18.00 42.41 3.49
848 869 2.480419 ACGACTGCTCACATTGTTTAGC 59.520 45.455 12.08 12.08 35.51 3.09
849 870 5.839262 TTACGACTGCTCACATTGTTTAG 57.161 39.130 0.00 0.00 0.00 1.85
851 872 4.261031 GGTTTACGACTGCTCACATTGTTT 60.261 41.667 0.00 0.00 0.00 2.83
885 913 3.972133 TCTCGGGTAACTAGGACATTCA 58.028 45.455 0.00 0.00 0.00 2.57
890 918 4.525912 TTTGTTCTCGGGTAACTAGGAC 57.474 45.455 0.00 0.00 0.00 3.85
988 1016 5.018809 AGTGGTATTCATGCCAGAATTTGT 58.981 37.500 6.11 0.00 43.33 2.83
998 1026 5.412594 TCAACTTTCTGAGTGGTATTCATGC 59.587 40.000 0.00 0.00 39.00 4.06
1027 1055 0.548510 ATCTTAGCAGCTGGTTCCCC 59.451 55.000 25.47 0.45 0.00 4.81
1028 1056 2.019984 CAATCTTAGCAGCTGGTTCCC 58.980 52.381 25.47 1.30 0.00 3.97
1062 1090 1.606994 CGTCCCCATCGTTTGAACTGA 60.607 52.381 0.00 0.00 0.00 3.41
1175 1203 2.159198 GCCAGTGCAGAATGGTAAATGG 60.159 50.000 12.73 0.00 38.91 3.16
1265 1294 3.244156 TGCAAAATACAAATGAGCTGCG 58.756 40.909 0.00 0.00 0.00 5.18
1399 1428 6.670027 ACATTACCTTGAGTTCATCCTCTAGT 59.330 38.462 0.00 0.00 33.99 2.57
1414 1443 7.939782 TGGCATATGAACATAACATTACCTTG 58.060 34.615 6.97 0.00 0.00 3.61
1424 1453 8.034215 CCTTGTTTCTTTGGCATATGAACATAA 58.966 33.333 6.97 2.16 0.00 1.90
1426 1455 6.014327 ACCTTGTTTCTTTGGCATATGAACAT 60.014 34.615 6.97 0.00 0.00 2.71
1438 1467 4.053295 CAATGGCAGACCTTGTTTCTTTG 58.947 43.478 0.00 0.00 36.63 2.77
1439 1468 3.706086 ACAATGGCAGACCTTGTTTCTTT 59.294 39.130 0.00 0.00 35.22 2.52
1451 1480 5.221682 ACCAATCATGAAAAACAATGGCAGA 60.222 36.000 0.00 0.00 0.00 4.26
1460 1489 6.317789 TCAGTCAGACCAATCATGAAAAAC 57.682 37.500 0.00 0.00 0.00 2.43
1479 1508 1.570501 AGAGAGGGAGAGCTCATCAGT 59.429 52.381 17.77 0.00 33.62 3.41
1493 1522 6.435904 CCTATAACAATACAGAGGGAGAGAGG 59.564 46.154 0.00 0.00 0.00 3.69
1511 1565 4.176271 CCTTTTGCTGCAAAGCCTATAAC 58.824 43.478 24.83 0.00 34.72 1.89
1513 1567 3.193267 CACCTTTTGCTGCAAAGCCTATA 59.807 43.478 24.83 10.68 34.72 1.31
1602 1656 4.345257 TCTCCCACTCCTTAGCATGATAAC 59.655 45.833 0.00 0.00 0.00 1.89
1623 1677 9.785982 ACTACTTCAGAGCTTTTAAGAAAATCT 57.214 29.630 5.27 0.00 30.17 2.40
1711 1766 4.961099 AGTTCTCTGATGATGATGTCTCCA 59.039 41.667 0.00 0.00 0.00 3.86
1720 1775 4.126208 AGCACAGAGTTCTCTGATGATG 57.874 45.455 29.07 19.67 39.99 3.07
1760 1815 3.142951 AGGATCATCGACCTAAGTCTCG 58.857 50.000 0.00 0.00 41.16 4.04
1783 1838 1.906574 TCCTACGGTTCAAGCCTTCAT 59.093 47.619 0.00 0.00 0.00 2.57
1818 1880 5.160607 TGTGAAAACGTCCATCTCCTATT 57.839 39.130 0.00 0.00 0.00 1.73
1830 1892 1.890510 GGGCGGACTGTGAAAACGT 60.891 57.895 0.00 0.00 0.00 3.99
1832 1894 0.310854 CTTGGGCGGACTGTGAAAAC 59.689 55.000 0.00 0.00 0.00 2.43
1882 1944 0.954452 GCCCCTTGATAATGAAGGCG 59.046 55.000 0.00 0.00 39.02 5.52
1889 1951 8.428852 GTTACAATTTATTGGCCCCTTGATAAT 58.571 33.333 0.00 0.00 41.96 1.28
1917 1983 3.620929 TGTTCACACGTCAGAGTACTC 57.379 47.619 15.41 15.41 0.00 2.59
1958 2024 0.833949 GGAGGGAGTAGCTTCCAAGG 59.166 60.000 6.77 0.00 39.09 3.61
2001 2067 4.679373 TCCTTGAGCATGTTAGAGGATC 57.321 45.455 8.69 0.00 0.00 3.36
2002 2068 5.045286 ACTTTCCTTGAGCATGTTAGAGGAT 60.045 40.000 12.28 0.00 33.64 3.24
2003 2069 4.287067 ACTTTCCTTGAGCATGTTAGAGGA 59.713 41.667 8.69 8.69 0.00 3.71
2004 2070 4.583871 ACTTTCCTTGAGCATGTTAGAGG 58.416 43.478 4.79 4.79 0.00 3.69
2005 2071 5.121454 GTGACTTTCCTTGAGCATGTTAGAG 59.879 44.000 0.00 0.00 0.00 2.43
2006 2072 4.997395 GTGACTTTCCTTGAGCATGTTAGA 59.003 41.667 0.00 0.00 0.00 2.10
2007 2073 4.999950 AGTGACTTTCCTTGAGCATGTTAG 59.000 41.667 0.00 0.00 0.00 2.34
2008 2074 4.756642 CAGTGACTTTCCTTGAGCATGTTA 59.243 41.667 0.00 0.00 0.00 2.41
2009 2075 3.567164 CAGTGACTTTCCTTGAGCATGTT 59.433 43.478 0.00 0.00 0.00 2.71
2010 2076 3.144506 CAGTGACTTTCCTTGAGCATGT 58.855 45.455 0.00 0.00 0.00 3.21
2011 2077 3.405831 TCAGTGACTTTCCTTGAGCATG 58.594 45.455 0.00 0.00 0.00 4.06
2012 2078 3.672808 CTCAGTGACTTTCCTTGAGCAT 58.327 45.455 0.00 0.00 0.00 3.79
2013 2079 3.117491 CTCAGTGACTTTCCTTGAGCA 57.883 47.619 0.00 0.00 0.00 4.26
2015 2081 3.399440 AGCTCAGTGACTTTCCTTGAG 57.601 47.619 0.00 0.00 38.57 3.02
2016 2082 4.152647 TCTAGCTCAGTGACTTTCCTTGA 58.847 43.478 0.00 0.00 0.00 3.02
2017 2083 4.021544 ACTCTAGCTCAGTGACTTTCCTTG 60.022 45.833 0.00 0.00 0.00 3.61
2018 2084 4.021544 CACTCTAGCTCAGTGACTTTCCTT 60.022 45.833 17.30 0.00 43.54 3.36
2019 2085 3.509575 CACTCTAGCTCAGTGACTTTCCT 59.490 47.826 17.30 0.00 43.54 3.36
2020 2086 3.367910 CCACTCTAGCTCAGTGACTTTCC 60.368 52.174 21.95 0.00 43.54 3.13
2021 2087 3.257127 ACCACTCTAGCTCAGTGACTTTC 59.743 47.826 21.95 0.00 43.54 2.62
2022 2088 3.006323 CACCACTCTAGCTCAGTGACTTT 59.994 47.826 21.95 5.67 43.54 2.66
2023 2089 2.560542 CACCACTCTAGCTCAGTGACTT 59.439 50.000 21.95 7.60 43.54 3.01
2024 2090 2.166829 CACCACTCTAGCTCAGTGACT 58.833 52.381 21.95 8.14 43.54 3.41
2025 2091 1.889829 ACACCACTCTAGCTCAGTGAC 59.110 52.381 21.95 0.00 43.54 3.67
2026 2092 2.294449 ACACCACTCTAGCTCAGTGA 57.706 50.000 21.95 0.00 43.54 3.41
2027 2093 3.062763 CAAACACCACTCTAGCTCAGTG 58.937 50.000 15.84 15.84 40.96 3.66
2028 2094 2.700897 ACAAACACCACTCTAGCTCAGT 59.299 45.455 0.00 0.00 0.00 3.41
2029 2095 3.062763 CACAAACACCACTCTAGCTCAG 58.937 50.000 0.00 0.00 0.00 3.35
2030 2096 2.434336 ACACAAACACCACTCTAGCTCA 59.566 45.455 0.00 0.00 0.00 4.26
2031 2097 3.113260 ACACAAACACCACTCTAGCTC 57.887 47.619 0.00 0.00 0.00 4.09
2032 2098 4.682778 TTACACAAACACCACTCTAGCT 57.317 40.909 0.00 0.00 0.00 3.32
2033 2099 5.744666 TTTTACACAAACACCACTCTAGC 57.255 39.130 0.00 0.00 0.00 3.42
2053 2119 5.380900 CTCCCTGACTTTCCTTCTCTTTTT 58.619 41.667 0.00 0.00 0.00 1.94
2054 2120 4.748239 GCTCCCTGACTTTCCTTCTCTTTT 60.748 45.833 0.00 0.00 0.00 2.27
2055 2121 3.244735 GCTCCCTGACTTTCCTTCTCTTT 60.245 47.826 0.00 0.00 0.00 2.52
2056 2122 2.304470 GCTCCCTGACTTTCCTTCTCTT 59.696 50.000 0.00 0.00 0.00 2.85
2057 2123 1.905894 GCTCCCTGACTTTCCTTCTCT 59.094 52.381 0.00 0.00 0.00 3.10
2058 2124 1.905894 AGCTCCCTGACTTTCCTTCTC 59.094 52.381 0.00 0.00 0.00 2.87
2059 2125 2.037385 AGCTCCCTGACTTTCCTTCT 57.963 50.000 0.00 0.00 0.00 2.85
2060 2126 2.869101 AAGCTCCCTGACTTTCCTTC 57.131 50.000 0.00 0.00 0.00 3.46
2061 2127 3.846588 TCATAAGCTCCCTGACTTTCCTT 59.153 43.478 0.00 0.00 0.00 3.36
2062 2128 3.454858 TCATAAGCTCCCTGACTTTCCT 58.545 45.455 0.00 0.00 0.00 3.36
2063 2129 3.914426 TCATAAGCTCCCTGACTTTCC 57.086 47.619 0.00 0.00 0.00 3.13
2064 2130 6.375455 TCAATTTCATAAGCTCCCTGACTTTC 59.625 38.462 0.00 0.00 0.00 2.62
2065 2131 6.248433 TCAATTTCATAAGCTCCCTGACTTT 58.752 36.000 0.00 0.00 0.00 2.66
2066 2132 5.819991 TCAATTTCATAAGCTCCCTGACTT 58.180 37.500 0.00 0.00 0.00 3.01
2067 2133 5.441718 TCAATTTCATAAGCTCCCTGACT 57.558 39.130 0.00 0.00 0.00 3.41
2068 2134 6.515272 TTTCAATTTCATAAGCTCCCTGAC 57.485 37.500 0.00 0.00 0.00 3.51
2069 2135 9.425248 AATATTTCAATTTCATAAGCTCCCTGA 57.575 29.630 0.00 0.00 0.00 3.86
2124 2190 9.665264 GTTCAATTTTAGAAGACTCGTTTCAAT 57.335 29.630 0.00 0.00 0.00 2.57
2125 2191 8.889717 AGTTCAATTTTAGAAGACTCGTTTCAA 58.110 29.630 0.00 0.00 0.00 2.69
2126 2192 8.433421 AGTTCAATTTTAGAAGACTCGTTTCA 57.567 30.769 0.00 0.00 0.00 2.69
2127 2193 9.159470 CAAGTTCAATTTTAGAAGACTCGTTTC 57.841 33.333 0.00 0.00 0.00 2.78
2128 2194 8.129211 CCAAGTTCAATTTTAGAAGACTCGTTT 58.871 33.333 0.00 0.00 0.00 3.60
2129 2195 7.497909 TCCAAGTTCAATTTTAGAAGACTCGTT 59.502 33.333 0.00 0.00 0.00 3.85
2130 2196 6.990349 TCCAAGTTCAATTTTAGAAGACTCGT 59.010 34.615 0.00 0.00 0.00 4.18
2131 2197 7.421530 TCCAAGTTCAATTTTAGAAGACTCG 57.578 36.000 0.00 0.00 0.00 4.18
2132 2198 9.617975 CATTCCAAGTTCAATTTTAGAAGACTC 57.382 33.333 0.00 0.00 0.00 3.36
2133 2199 9.136323 ACATTCCAAGTTCAATTTTAGAAGACT 57.864 29.630 0.00 0.00 0.00 3.24
2134 2200 9.399403 GACATTCCAAGTTCAATTTTAGAAGAC 57.601 33.333 0.00 0.00 0.00 3.01
2135 2201 9.130661 TGACATTCCAAGTTCAATTTTAGAAGA 57.869 29.630 0.00 0.00 0.00 2.87
2136 2202 9.185192 GTGACATTCCAAGTTCAATTTTAGAAG 57.815 33.333 0.00 0.00 0.00 2.85
2137 2203 8.690884 TGTGACATTCCAAGTTCAATTTTAGAA 58.309 29.630 0.00 0.00 0.00 2.10
2138 2204 8.231692 TGTGACATTCCAAGTTCAATTTTAGA 57.768 30.769 0.00 0.00 0.00 2.10
2139 2205 8.870160 TTGTGACATTCCAAGTTCAATTTTAG 57.130 30.769 0.00 0.00 0.00 1.85
2140 2206 9.829507 ATTTGTGACATTCCAAGTTCAATTTTA 57.170 25.926 0.00 0.00 0.00 1.52
2141 2207 8.735692 ATTTGTGACATTCCAAGTTCAATTTT 57.264 26.923 0.00 0.00 0.00 1.82
2142 2208 8.614346 CAATTTGTGACATTCCAAGTTCAATTT 58.386 29.630 0.00 0.00 0.00 1.82
2143 2209 7.986320 TCAATTTGTGACATTCCAAGTTCAATT 59.014 29.630 0.00 0.00 0.00 2.32
2144 2210 7.499292 TCAATTTGTGACATTCCAAGTTCAAT 58.501 30.769 0.00 0.00 0.00 2.57
2145 2211 6.871844 TCAATTTGTGACATTCCAAGTTCAA 58.128 32.000 0.00 0.00 0.00 2.69
2146 2212 6.462552 TCAATTTGTGACATTCCAAGTTCA 57.537 33.333 0.00 0.00 0.00 3.18
2147 2213 7.769272 TTTCAATTTGTGACATTCCAAGTTC 57.231 32.000 0.00 0.00 35.39 3.01
2148 2214 8.614346 CAATTTCAATTTGTGACATTCCAAGTT 58.386 29.630 0.00 0.00 34.97 2.66
2149 2215 7.986320 TCAATTTCAATTTGTGACATTCCAAGT 59.014 29.630 0.00 0.00 34.97 3.16
2150 2216 8.367943 TCAATTTCAATTTGTGACATTCCAAG 57.632 30.769 0.00 0.00 34.97 3.61
2151 2217 8.905660 ATCAATTTCAATTTGTGACATTCCAA 57.094 26.923 0.00 0.00 34.97 3.53
2152 2218 8.369424 AGATCAATTTCAATTTGTGACATTCCA 58.631 29.630 0.00 0.00 34.97 3.53
2153 2219 8.767478 AGATCAATTTCAATTTGTGACATTCC 57.233 30.769 0.00 0.00 34.97 3.01
2171 2237 9.428097 GCAGGTTTCAATTTCTAAAAGATCAAT 57.572 29.630 0.00 0.00 0.00 2.57
2172 2238 7.872483 GGCAGGTTTCAATTTCTAAAAGATCAA 59.128 33.333 0.00 0.00 0.00 2.57
2173 2239 7.233348 AGGCAGGTTTCAATTTCTAAAAGATCA 59.767 33.333 0.00 0.00 0.00 2.92
2174 2240 7.606349 AGGCAGGTTTCAATTTCTAAAAGATC 58.394 34.615 0.00 0.00 0.00 2.75
2175 2241 7.544804 AGGCAGGTTTCAATTTCTAAAAGAT 57.455 32.000 0.00 0.00 0.00 2.40
2176 2242 6.976934 AGGCAGGTTTCAATTTCTAAAAGA 57.023 33.333 0.00 0.00 0.00 2.52
2177 2243 8.337532 CAAAAGGCAGGTTTCAATTTCTAAAAG 58.662 33.333 0.00 0.00 0.00 2.27
2178 2244 8.043710 TCAAAAGGCAGGTTTCAATTTCTAAAA 58.956 29.630 0.00 0.00 0.00 1.52
2179 2245 7.560368 TCAAAAGGCAGGTTTCAATTTCTAAA 58.440 30.769 0.00 0.00 0.00 1.85
2180 2246 7.118496 TCAAAAGGCAGGTTTCAATTTCTAA 57.882 32.000 0.00 0.00 0.00 2.10
2181 2247 6.723298 TCAAAAGGCAGGTTTCAATTTCTA 57.277 33.333 0.00 0.00 0.00 2.10
2182 2248 5.612725 TCAAAAGGCAGGTTTCAATTTCT 57.387 34.783 0.00 0.00 0.00 2.52
2183 2249 6.676237 TTTCAAAAGGCAGGTTTCAATTTC 57.324 33.333 0.00 0.00 0.00 2.17
2184 2250 7.643569 ATTTTCAAAAGGCAGGTTTCAATTT 57.356 28.000 0.00 0.00 0.00 1.82
2185 2251 7.338957 TCAATTTTCAAAAGGCAGGTTTCAATT 59.661 29.630 0.00 0.00 0.00 2.32
2186 2252 6.827762 TCAATTTTCAAAAGGCAGGTTTCAAT 59.172 30.769 0.00 0.00 0.00 2.57
2187 2253 6.176183 TCAATTTTCAAAAGGCAGGTTTCAA 58.824 32.000 0.00 0.00 0.00 2.69
2188 2254 5.738909 TCAATTTTCAAAAGGCAGGTTTCA 58.261 33.333 0.00 0.00 0.00 2.69
2189 2255 6.676237 TTCAATTTTCAAAAGGCAGGTTTC 57.324 33.333 0.00 0.00 0.00 2.78
2190 2256 7.643569 ATTTCAATTTTCAAAAGGCAGGTTT 57.356 28.000 0.00 0.00 0.00 3.27
2191 2257 8.744568 TTATTTCAATTTTCAAAAGGCAGGTT 57.255 26.923 0.00 0.00 0.00 3.50
2192 2258 7.041167 GCTTATTTCAATTTTCAAAAGGCAGGT 60.041 33.333 0.00 0.00 0.00 4.00
2193 2259 7.041235 TGCTTATTTCAATTTTCAAAAGGCAGG 60.041 33.333 0.00 0.00 0.00 4.85
2194 2260 7.799914 GTGCTTATTTCAATTTTCAAAAGGCAG 59.200 33.333 0.00 0.00 0.00 4.85
2195 2261 7.498570 AGTGCTTATTTCAATTTTCAAAAGGCA 59.501 29.630 0.00 0.00 0.00 4.75
2196 2262 7.799914 CAGTGCTTATTTCAATTTTCAAAAGGC 59.200 33.333 0.00 0.00 0.00 4.35
2197 2263 8.829612 ACAGTGCTTATTTCAATTTTCAAAAGG 58.170 29.630 0.00 0.00 0.00 3.11
2200 2266 9.376075 TGAACAGTGCTTATTTCAATTTTCAAA 57.624 25.926 0.00 0.00 29.21 2.69
2201 2267 8.939201 TGAACAGTGCTTATTTCAATTTTCAA 57.061 26.923 0.00 0.00 29.21 2.69
2202 2268 8.980610 CATGAACAGTGCTTATTTCAATTTTCA 58.019 29.630 0.00 0.00 34.31 2.69
2203 2269 8.437742 CCATGAACAGTGCTTATTTCAATTTTC 58.562 33.333 0.00 0.00 31.96 2.29
2204 2270 7.388500 CCCATGAACAGTGCTTATTTCAATTTT 59.612 33.333 0.00 0.00 31.96 1.82
2205 2271 6.875195 CCCATGAACAGTGCTTATTTCAATTT 59.125 34.615 0.00 0.00 31.96 1.82
2206 2272 6.400568 CCCATGAACAGTGCTTATTTCAATT 58.599 36.000 0.00 0.00 31.96 2.32
2207 2273 5.625197 GCCCATGAACAGTGCTTATTTCAAT 60.625 40.000 0.00 0.00 31.96 2.57
2208 2274 4.321899 GCCCATGAACAGTGCTTATTTCAA 60.322 41.667 0.00 0.00 31.96 2.69
2209 2275 3.193267 GCCCATGAACAGTGCTTATTTCA 59.807 43.478 0.00 0.00 32.71 2.69
2210 2276 3.445096 AGCCCATGAACAGTGCTTATTTC 59.555 43.478 0.00 0.00 0.00 2.17
2211 2277 3.434309 AGCCCATGAACAGTGCTTATTT 58.566 40.909 0.00 0.00 0.00 1.40
2212 2278 3.091633 AGCCCATGAACAGTGCTTATT 57.908 42.857 0.00 0.00 0.00 1.40
2213 2279 2.814805 AGCCCATGAACAGTGCTTAT 57.185 45.000 0.00 0.00 0.00 1.73
2214 2280 3.263170 TCTTAGCCCATGAACAGTGCTTA 59.737 43.478 0.00 0.00 33.63 3.09
2215 2281 2.040278 TCTTAGCCCATGAACAGTGCTT 59.960 45.455 0.00 0.00 33.63 3.91
2216 2282 1.630369 TCTTAGCCCATGAACAGTGCT 59.370 47.619 0.00 0.00 36.11 4.40
2217 2283 2.012673 CTCTTAGCCCATGAACAGTGC 58.987 52.381 0.00 0.00 0.00 4.40
2218 2284 3.005554 CACTCTTAGCCCATGAACAGTG 58.994 50.000 0.00 0.00 0.00 3.66
2219 2285 2.906389 TCACTCTTAGCCCATGAACAGT 59.094 45.455 0.00 0.00 0.00 3.55
2220 2286 3.616956 TCACTCTTAGCCCATGAACAG 57.383 47.619 0.00 0.00 0.00 3.16
2221 2287 4.041567 TCTTTCACTCTTAGCCCATGAACA 59.958 41.667 0.00 0.00 0.00 3.18
2222 2288 4.579869 TCTTTCACTCTTAGCCCATGAAC 58.420 43.478 0.00 0.00 0.00 3.18
2223 2289 4.908601 TCTTTCACTCTTAGCCCATGAA 57.091 40.909 0.00 0.00 0.00 2.57
2224 2290 4.908601 TTCTTTCACTCTTAGCCCATGA 57.091 40.909 0.00 0.00 0.00 3.07
2225 2291 5.006386 ACTTTCTTTCACTCTTAGCCCATG 58.994 41.667 0.00 0.00 0.00 3.66
2226 2292 5.248380 ACTTTCTTTCACTCTTAGCCCAT 57.752 39.130 0.00 0.00 0.00 4.00
2227 2293 4.706842 ACTTTCTTTCACTCTTAGCCCA 57.293 40.909 0.00 0.00 0.00 5.36
2228 2294 5.644206 CCTAACTTTCTTTCACTCTTAGCCC 59.356 44.000 0.00 0.00 0.00 5.19
2229 2295 6.231951 ACCTAACTTTCTTTCACTCTTAGCC 58.768 40.000 0.00 0.00 0.00 3.93
2230 2296 7.731882 AACCTAACTTTCTTTCACTCTTAGC 57.268 36.000 0.00 0.00 0.00 3.09
2231 2297 9.984190 AGTAACCTAACTTTCTTTCACTCTTAG 57.016 33.333 0.00 0.00 0.00 2.18
2232 2298 9.760077 CAGTAACCTAACTTTCTTTCACTCTTA 57.240 33.333 0.00 0.00 0.00 2.10
2233 2299 8.265764 ACAGTAACCTAACTTTCTTTCACTCTT 58.734 33.333 0.00 0.00 0.00 2.85
2234 2300 7.793036 ACAGTAACCTAACTTTCTTTCACTCT 58.207 34.615 0.00 0.00 0.00 3.24
2235 2301 9.194271 CTACAGTAACCTAACTTTCTTTCACTC 57.806 37.037 0.00 0.00 0.00 3.51
2236 2302 7.656542 GCTACAGTAACCTAACTTTCTTTCACT 59.343 37.037 0.00 0.00 0.00 3.41
2237 2303 7.656542 AGCTACAGTAACCTAACTTTCTTTCAC 59.343 37.037 0.00 0.00 0.00 3.18
2238 2304 7.732996 AGCTACAGTAACCTAACTTTCTTTCA 58.267 34.615 0.00 0.00 0.00 2.69
2239 2305 8.604640 AAGCTACAGTAACCTAACTTTCTTTC 57.395 34.615 0.00 0.00 0.00 2.62
2240 2306 9.486497 GTAAGCTACAGTAACCTAACTTTCTTT 57.514 33.333 0.00 0.00 0.00 2.52
2241 2307 8.093307 GGTAAGCTACAGTAACCTAACTTTCTT 58.907 37.037 0.00 0.00 0.00 2.52
2242 2308 7.454066 AGGTAAGCTACAGTAACCTAACTTTCT 59.546 37.037 0.36 0.00 38.78 2.52
2243 2309 7.544915 CAGGTAAGCTACAGTAACCTAACTTTC 59.455 40.741 1.92 0.00 38.51 2.62
2244 2310 7.234166 TCAGGTAAGCTACAGTAACCTAACTTT 59.766 37.037 1.92 0.00 38.51 2.66
2245 2311 6.723052 TCAGGTAAGCTACAGTAACCTAACTT 59.277 38.462 1.92 0.00 38.51 2.66
2246 2312 6.251471 TCAGGTAAGCTACAGTAACCTAACT 58.749 40.000 1.92 0.00 38.51 2.24
2247 2313 6.521151 TCAGGTAAGCTACAGTAACCTAAC 57.479 41.667 1.92 0.00 38.51 2.34
2248 2314 7.729124 ATTCAGGTAAGCTACAGTAACCTAA 57.271 36.000 1.92 0.00 38.51 2.69
2249 2315 7.147776 GGAATTCAGGTAAGCTACAGTAACCTA 60.148 40.741 7.93 0.00 38.51 3.08
2250 2316 6.351966 GGAATTCAGGTAAGCTACAGTAACCT 60.352 42.308 7.93 0.00 41.24 3.50
2251 2317 5.816258 GGAATTCAGGTAAGCTACAGTAACC 59.184 44.000 7.93 0.00 0.00 2.85
2252 2318 5.816258 GGGAATTCAGGTAAGCTACAGTAAC 59.184 44.000 7.93 0.00 0.00 2.50
2253 2319 5.724854 AGGGAATTCAGGTAAGCTACAGTAA 59.275 40.000 7.93 0.00 0.00 2.24
2254 2320 5.278061 AGGGAATTCAGGTAAGCTACAGTA 58.722 41.667 7.93 0.00 0.00 2.74
2255 2321 4.104831 AGGGAATTCAGGTAAGCTACAGT 58.895 43.478 7.93 0.00 0.00 3.55
2256 2322 4.762289 AGGGAATTCAGGTAAGCTACAG 57.238 45.455 7.93 0.00 0.00 2.74
2257 2323 5.013704 TCAAAGGGAATTCAGGTAAGCTACA 59.986 40.000 7.93 0.00 0.00 2.74
2258 2324 5.497474 TCAAAGGGAATTCAGGTAAGCTAC 58.503 41.667 7.93 0.00 0.00 3.58
2259 2325 5.772393 TCAAAGGGAATTCAGGTAAGCTA 57.228 39.130 7.93 0.00 0.00 3.32
2260 2326 4.657814 TCAAAGGGAATTCAGGTAAGCT 57.342 40.909 7.93 0.00 0.00 3.74
2261 2327 5.185828 ACATTCAAAGGGAATTCAGGTAAGC 59.814 40.000 7.93 0.00 43.76 3.09
2262 2328 6.840780 ACATTCAAAGGGAATTCAGGTAAG 57.159 37.500 7.93 0.00 43.76 2.34
2263 2329 6.072175 CGAACATTCAAAGGGAATTCAGGTAA 60.072 38.462 7.93 0.00 43.76 2.85
2264 2330 5.414454 CGAACATTCAAAGGGAATTCAGGTA 59.586 40.000 7.93 0.00 43.76 3.08
2265 2331 4.218417 CGAACATTCAAAGGGAATTCAGGT 59.782 41.667 7.93 0.00 43.76 4.00
2266 2332 4.380867 CCGAACATTCAAAGGGAATTCAGG 60.381 45.833 7.93 0.00 43.76 3.86
2267 2333 4.458989 TCCGAACATTCAAAGGGAATTCAG 59.541 41.667 7.93 0.00 43.76 3.02
2268 2334 4.402829 TCCGAACATTCAAAGGGAATTCA 58.597 39.130 7.93 0.00 43.76 2.57
2269 2335 5.450550 GGATCCGAACATTCAAAGGGAATTC 60.451 44.000 0.00 0.00 43.76 2.17
2270 2336 4.402474 GGATCCGAACATTCAAAGGGAATT 59.598 41.667 0.00 0.00 43.76 2.17
2272 2338 3.245087 TGGATCCGAACATTCAAAGGGAA 60.245 43.478 7.39 0.00 40.46 3.97
2273 2339 2.307392 TGGATCCGAACATTCAAAGGGA 59.693 45.455 7.39 0.00 0.00 4.20
2274 2340 2.684881 CTGGATCCGAACATTCAAAGGG 59.315 50.000 7.39 0.00 0.00 3.95
2275 2341 2.098117 GCTGGATCCGAACATTCAAAGG 59.902 50.000 7.39 0.00 0.00 3.11
2276 2342 3.012518 AGCTGGATCCGAACATTCAAAG 58.987 45.455 7.39 0.00 0.00 2.77
2277 2343 3.009723 GAGCTGGATCCGAACATTCAAA 58.990 45.455 7.39 0.00 0.00 2.69
2278 2344 2.632377 GAGCTGGATCCGAACATTCAA 58.368 47.619 7.39 0.00 0.00 2.69
2279 2345 1.134401 GGAGCTGGATCCGAACATTCA 60.134 52.381 7.39 0.00 0.00 2.57
2280 2346 1.134401 TGGAGCTGGATCCGAACATTC 60.134 52.381 7.39 0.00 42.77 2.67
2281 2347 0.911769 TGGAGCTGGATCCGAACATT 59.088 50.000 7.39 0.00 42.77 2.71
2282 2348 0.911769 TTGGAGCTGGATCCGAACAT 59.088 50.000 7.39 0.00 42.77 2.71
2283 2349 0.911769 ATTGGAGCTGGATCCGAACA 59.088 50.000 7.39 0.00 42.77 3.18
2284 2350 2.910688 TATTGGAGCTGGATCCGAAC 57.089 50.000 7.39 0.00 42.77 3.95
2285 2351 4.838423 TCTTATATTGGAGCTGGATCCGAA 59.162 41.667 7.39 0.00 42.77 4.30
2286 2352 4.416516 TCTTATATTGGAGCTGGATCCGA 58.583 43.478 7.39 0.00 42.77 4.55
2287 2353 4.753233 CTCTTATATTGGAGCTGGATCCG 58.247 47.826 7.39 3.14 42.77 4.18
2296 2362 6.698766 GTGCCAAAAATGCTCTTATATTGGAG 59.301 38.462 5.86 0.00 38.44 3.86
2297 2363 6.154192 TGTGCCAAAAATGCTCTTATATTGGA 59.846 34.615 5.86 0.00 38.44 3.53
2298 2364 6.339730 TGTGCCAAAAATGCTCTTATATTGG 58.660 36.000 0.00 0.00 39.02 3.16
2299 2365 7.830940 TTGTGCCAAAAATGCTCTTATATTG 57.169 32.000 0.00 0.00 0.00 1.90
2300 2366 8.720562 GTTTTGTGCCAAAAATGCTCTTATATT 58.279 29.630 12.69 0.00 32.02 1.28
2301 2367 8.096414 AGTTTTGTGCCAAAAATGCTCTTATAT 58.904 29.630 12.69 0.00 32.02 0.86
2302 2368 7.441017 AGTTTTGTGCCAAAAATGCTCTTATA 58.559 30.769 12.69 0.00 32.02 0.98
2303 2369 6.290605 AGTTTTGTGCCAAAAATGCTCTTAT 58.709 32.000 12.69 0.00 32.02 1.73
2304 2370 5.669477 AGTTTTGTGCCAAAAATGCTCTTA 58.331 33.333 12.69 0.00 32.02 2.10
2305 2371 4.516323 AGTTTTGTGCCAAAAATGCTCTT 58.484 34.783 12.69 0.00 32.02 2.85
2306 2372 4.122046 GAGTTTTGTGCCAAAAATGCTCT 58.878 39.130 14.94 8.35 32.02 4.09
2307 2373 4.122046 AGAGTTTTGTGCCAAAAATGCTC 58.878 39.130 14.94 14.77 32.02 4.26
2311 2377 5.177327 CGCATTAGAGTTTTGTGCCAAAAAT 59.823 36.000 12.69 12.04 32.02 1.82
2318 2384 3.536158 TGACGCATTAGAGTTTTGTGC 57.464 42.857 0.00 0.00 0.00 4.57
2323 2389 5.238432 TGTTCACAATGACGCATTAGAGTTT 59.762 36.000 5.03 0.00 32.35 2.66
2324 2390 4.754618 TGTTCACAATGACGCATTAGAGTT 59.245 37.500 5.03 0.00 32.35 3.01
2328 2394 5.630061 TGATTGTTCACAATGACGCATTAG 58.370 37.500 9.93 2.68 45.72 1.73
2332 2398 3.137533 TCTGATTGTTCACAATGACGCA 58.862 40.909 9.93 1.47 45.72 5.24
2333 2399 3.811722 TCTGATTGTTCACAATGACGC 57.188 42.857 9.93 0.00 45.72 5.19
2334 2400 6.638063 ACAAAATCTGATTGTTCACAATGACG 59.362 34.615 9.93 0.00 45.72 4.35
2335 2401 7.935338 ACAAAATCTGATTGTTCACAATGAC 57.065 32.000 9.93 0.00 45.72 3.06
2336 2402 9.628746 CATACAAAATCTGATTGTTCACAATGA 57.371 29.630 9.93 0.75 45.72 2.57
2337 2403 8.377681 GCATACAAAATCTGATTGTTCACAATG 58.622 33.333 9.93 2.42 45.72 2.82
2403 2470 6.773685 CCCTCCGTCCCATAACAATATAAAAA 59.226 38.462 0.00 0.00 0.00 1.94
2404 2471 6.101442 TCCCTCCGTCCCATAACAATATAAAA 59.899 38.462 0.00 0.00 0.00 1.52
2405 2472 5.607592 TCCCTCCGTCCCATAACAATATAAA 59.392 40.000 0.00 0.00 0.00 1.40
2406 2473 5.156649 TCCCTCCGTCCCATAACAATATAA 58.843 41.667 0.00 0.00 0.00 0.98
2407 2474 4.754311 TCCCTCCGTCCCATAACAATATA 58.246 43.478 0.00 0.00 0.00 0.86
2408 2475 3.583086 CTCCCTCCGTCCCATAACAATAT 59.417 47.826 0.00 0.00 0.00 1.28
2409 2476 2.969950 CTCCCTCCGTCCCATAACAATA 59.030 50.000 0.00 0.00 0.00 1.90
2410 2477 1.768870 CTCCCTCCGTCCCATAACAAT 59.231 52.381 0.00 0.00 0.00 2.71
2411 2478 1.200519 CTCCCTCCGTCCCATAACAA 58.799 55.000 0.00 0.00 0.00 2.83
2412 2479 0.042131 ACTCCCTCCGTCCCATAACA 59.958 55.000 0.00 0.00 0.00 2.41
2413 2480 2.077687 TACTCCCTCCGTCCCATAAC 57.922 55.000 0.00 0.00 0.00 1.89
2417 2484 0.337082 TGATTACTCCCTCCGTCCCA 59.663 55.000 0.00 0.00 0.00 4.37
2423 2490 3.260884 TGACACAACTGATTACTCCCTCC 59.739 47.826 0.00 0.00 0.00 4.30
2440 2507 0.529773 TTGTCTGGTGCTCGTGACAC 60.530 55.000 10.54 0.00 38.87 3.67
2453 2520 6.396829 AGAACTTTCTTCCCATTTTGTCTG 57.603 37.500 0.00 0.00 32.55 3.51
2454 2521 7.998964 TCTAAGAACTTTCTTCCCATTTTGTCT 59.001 33.333 7.50 0.00 43.72 3.41
2455 2522 8.166422 TCTAAGAACTTTCTTCCCATTTTGTC 57.834 34.615 7.50 0.00 43.72 3.18
2465 2532 6.256912 TCGGAGTCTCTAAGAACTTTCTTC 57.743 41.667 7.50 0.00 43.72 2.87
2472 2539 2.691011 AGGCATCGGAGTCTCTAAGAAC 59.309 50.000 0.00 0.00 0.00 3.01
2475 2542 2.028130 ACAGGCATCGGAGTCTCTAAG 58.972 52.381 0.00 0.00 0.00 2.18
2478 2545 2.373335 ATACAGGCATCGGAGTCTCT 57.627 50.000 0.00 0.00 0.00 3.10
2493 2560 2.159099 GGTGATCTGACAGCCGAATACA 60.159 50.000 0.00 0.00 32.97 2.29
2505 2572 1.489481 AATCGAGCCAGGTGATCTGA 58.511 50.000 0.00 0.00 46.18 3.27
2508 2575 2.315925 TCAAATCGAGCCAGGTGATC 57.684 50.000 0.00 0.00 0.00 2.92
2515 2582 3.191162 CCATGAAGTTTCAAATCGAGCCA 59.809 43.478 0.00 0.00 41.13 4.75
2555 3817 3.503748 CACTAGGTTTCTGCTTTTCCCTG 59.496 47.826 0.00 0.00 0.00 4.45
2556 3818 3.498661 CCACTAGGTTTCTGCTTTTCCCT 60.499 47.826 0.00 0.00 0.00 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.