Multiple sequence alignment - TraesCS4A01G107900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G107900 chr4A 100.000 3932 0 0 1 3932 125042129 125038198 0.000000e+00 7262.0
1 TraesCS4A01G107900 chr4A 84.682 346 31 10 3607 3932 621705814 621706157 3.790000e-85 326.0
2 TraesCS4A01G107900 chr4A 96.875 64 2 0 3606 3669 125031144 125031081 1.490000e-19 108.0
3 TraesCS4A01G107900 chr4D 92.651 2912 108 43 489 3338 341691502 341694369 0.000000e+00 4095.0
4 TraesCS4A01G107900 chr4D 92.903 155 8 3 2183 2335 74079351 74079504 5.110000e-54 222.0
5 TraesCS4A01G107900 chr4B 89.976 2973 144 60 489 3372 423771551 423774458 0.000000e+00 3698.0
6 TraesCS4A01G107900 chr4B 90.215 419 39 2 1 419 423771128 423771544 2.670000e-151 545.0
7 TraesCS4A01G107900 chr4B 94.805 154 6 2 2183 2335 106227409 106227561 5.080000e-59 239.0
8 TraesCS4A01G107900 chr4B 92.949 156 9 2 2183 2337 438375181 438375335 3.950000e-55 226.0
9 TraesCS4A01G107900 chr4B 88.136 118 13 1 3383 3499 601384391 601384274 5.300000e-29 139.0
10 TraesCS4A01G107900 chr2A 93.353 346 4 2 3606 3932 70134931 70134586 9.820000e-136 494.0
11 TraesCS4A01G107900 chr2A 93.452 336 14 2 3604 3932 12904850 12904516 3.530000e-135 492.0
12 TraesCS4A01G107900 chr2A 91.844 282 4 3 3606 3868 70118941 70118660 3.710000e-100 375.0
13 TraesCS4A01G107900 chr2A 93.125 160 8 3 2177 2335 141506475 141506318 8.500000e-57 231.0
14 TraesCS4A01G107900 chr2A 91.925 161 11 2 2176 2335 79315998 79316157 1.420000e-54 224.0
15 TraesCS4A01G107900 chr1A 91.908 346 8 3 3606 3932 561407392 561407048 2.140000e-127 466.0
16 TraesCS4A01G107900 chr1A 90.857 350 10 5 3604 3932 327713819 327713471 2.150000e-122 449.0
17 TraesCS4A01G107900 chr1A 90.000 280 8 3 3606 3866 327706385 327706107 1.050000e-90 344.0
18 TraesCS4A01G107900 chr1A 89.510 286 10 3 3606 3872 561391728 561391444 1.050000e-90 344.0
19 TraesCS4A01G107900 chr7D 87.425 334 21 6 3606 3919 168818006 168817674 8.030000e-97 364.0
20 TraesCS4A01G107900 chr7A 82.206 399 66 3 1 398 272301513 272301119 4.870000e-89 339.0
21 TraesCS4A01G107900 chr7A 90.000 110 11 0 3387 3496 596660546 596660655 4.100000e-30 143.0
22 TraesCS4A01G107900 chr5A 85.100 349 30 7 3604 3932 649442264 649442610 1.750000e-88 337.0
23 TraesCS4A01G107900 chr5A 93.750 48 1 2 3324 3370 3296070 3296116 1.960000e-08 71.3
24 TraesCS4A01G107900 chr5A 91.667 48 2 2 3324 3370 3295495 3295541 9.120000e-07 65.8
25 TraesCS4A01G107900 chr7B 84.726 347 31 7 3606 3932 648721063 648720719 1.050000e-85 327.0
26 TraesCS4A01G107900 chr7B 89.381 113 12 0 3387 3499 91214056 91213944 4.100000e-30 143.0
27 TraesCS4A01G107900 chr7B 90.000 110 11 0 3387 3496 123945242 123945351 4.100000e-30 143.0
28 TraesCS4A01G107900 chr3D 88.476 269 11 3 3606 3855 35724746 35725013 1.370000e-79 307.0
29 TraesCS4A01G107900 chr2D 92.547 161 10 2 2176 2335 79056160 79056319 3.060000e-56 230.0
30 TraesCS4A01G107900 chr2D 100.000 29 0 0 3342 3370 27824861 27824833 2.000000e-03 54.7
31 TraesCS4A01G107900 chr6A 92.453 159 10 2 2179 2336 411770249 411770406 3.950000e-55 226.0
32 TraesCS4A01G107900 chr1D 90.909 110 10 0 3387 3496 121624482 121624591 8.800000e-32 148.0
33 TraesCS4A01G107900 chr1D 89.381 113 11 1 3387 3499 464737140 464737029 1.470000e-29 141.0
34 TraesCS4A01G107900 chr1B 90.265 113 11 0 3387 3499 637344827 637344715 8.800000e-32 148.0
35 TraesCS4A01G107900 chrUn 89.381 113 12 0 3387 3499 457867535 457867423 4.100000e-30 143.0
36 TraesCS4A01G107900 chr3B 90.000 110 11 0 3387 3496 507505575 507505684 4.100000e-30 143.0
37 TraesCS4A01G107900 chr5B 97.368 38 1 0 3331 3368 455296286 455296249 9.120000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G107900 chr4A 125038198 125042129 3931 True 7262.0 7262 100.0000 1 3932 1 chr4A.!!$R2 3931
1 TraesCS4A01G107900 chr4D 341691502 341694369 2867 False 4095.0 4095 92.6510 489 3338 1 chr4D.!!$F2 2849
2 TraesCS4A01G107900 chr4B 423771128 423774458 3330 False 2121.5 3698 90.0955 1 3372 2 chr4B.!!$F3 3371

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
271 272 0.394192 GATGATGATGGCTGGACGGA 59.606 55.000 0.0 0.0 0.00 4.69 F
1296 1377 0.393448 TGTAGCAGGCGGTGTGTTTA 59.607 50.000 0.0 0.0 0.00 2.01 F
1621 1712 0.875908 CCGTAGCGGTGACATGGATG 60.876 60.000 0.0 0.0 42.73 3.51 F
2730 2832 3.626977 TGCTGCATTTTCTTTGTACACG 58.373 40.909 0.0 0.0 0.00 4.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1458 1546 2.040278 AGCATTGCAGGGAAGTAACTCA 59.960 45.455 11.91 0.0 0.00 3.41 R
2727 2829 0.381801 AGAAGGCAACAAACTGCGTG 59.618 50.000 0.00 0.0 43.60 5.34 R
2735 2837 1.985473 AGCACATCAGAAGGCAACAA 58.015 45.000 0.00 0.0 41.41 2.83 R
3890 3994 0.030638 GATGGCTCTCTGTCGCTCTC 59.969 60.000 0.00 0.0 0.00 3.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 4.975147 TGGAATAGGTGAGGTCCATACATT 59.025 41.667 0.00 0.00 35.22 2.71
46 47 7.822334 ACATTAGTATGAATTGACTGAAACGGA 59.178 33.333 0.00 0.00 35.65 4.69
50 51 8.110860 AGTATGAATTGACTGAAACGGAAAAT 57.889 30.769 0.00 0.00 0.00 1.82
57 58 6.078202 TGACTGAAACGGAAAATATGCAAA 57.922 33.333 0.00 0.00 0.00 3.68
65 66 5.788450 ACGGAAAATATGCAAATGTGGAAA 58.212 33.333 0.00 0.00 0.00 3.13
77 78 7.426410 TGCAAATGTGGAAAACGAACTAAATA 58.574 30.769 0.00 0.00 0.00 1.40
87 88 7.948895 GGAAAACGAACTAAATAGAAGACGAAC 59.051 37.037 0.00 0.00 0.00 3.95
96 97 2.175878 AGAAGACGAACATGCTTGCT 57.824 45.000 0.00 0.00 0.00 3.91
104 105 1.127582 GAACATGCTTGCTGAGACGAC 59.872 52.381 0.00 0.00 0.00 4.34
140 141 8.458573 AGTATGGTTGTCTGTTTTATCACAAA 57.541 30.769 0.00 0.00 30.73 2.83
141 142 8.908903 AGTATGGTTGTCTGTTTTATCACAAAA 58.091 29.630 0.00 0.00 30.73 2.44
161 162 7.853929 CACAAAAAGAAAGAAAATCCTTGCATG 59.146 33.333 0.00 0.00 0.00 4.06
165 166 7.900782 AAGAAAGAAAATCCTTGCATGATTG 57.099 32.000 11.47 0.00 32.91 2.67
168 169 4.501071 AGAAAATCCTTGCATGATTGTGC 58.499 39.130 11.47 5.88 45.25 4.57
202 203 2.047274 CGGATGACCAAGGCGTGT 60.047 61.111 0.00 0.00 35.59 4.49
271 272 0.394192 GATGATGATGGCTGGACGGA 59.606 55.000 0.00 0.00 0.00 4.69
290 291 3.567397 GGAGTAGAGATTGGCAGGACTA 58.433 50.000 0.00 0.00 0.00 2.59
299 300 0.752658 TGGCAGGACTATCACATCGG 59.247 55.000 0.00 0.00 0.00 4.18
308 309 3.722147 ACTATCACATCGGTGCAGAATC 58.278 45.455 0.00 0.00 44.87 2.52
317 318 1.067060 CGGTGCAGAATCATCCGAGTA 59.933 52.381 3.74 0.00 43.22 2.59
328 329 2.700371 TCATCCGAGTACATGCATCCTT 59.300 45.455 0.00 0.00 0.00 3.36
332 333 3.449377 TCCGAGTACATGCATCCTTAACA 59.551 43.478 0.00 0.00 0.00 2.41
358 359 6.515832 AGAAACCAACTCCATCAAATTTCAC 58.484 36.000 0.00 0.00 0.00 3.18
366 367 7.765695 ACTCCATCAAATTTCACAGTTACAT 57.234 32.000 0.00 0.00 0.00 2.29
367 368 7.596494 ACTCCATCAAATTTCACAGTTACATG 58.404 34.615 0.00 0.00 0.00 3.21
377 378 4.877282 TCACAGTTACATGATTGTCACGA 58.123 39.130 0.00 0.00 35.54 4.35
387 388 6.173339 ACATGATTGTCACGAGTAAAGGAAT 58.827 36.000 0.00 0.00 0.00 3.01
391 392 7.258441 TGATTGTCACGAGTAAAGGAATAGAG 58.742 38.462 0.00 0.00 0.00 2.43
420 421 9.892130 AGACTAGATTTTTGATAAGGTTAGGTG 57.108 33.333 0.00 0.00 0.00 4.00
425 426 9.362151 AGATTTTTGATAAGGTTAGGTGAAACA 57.638 29.630 0.00 0.00 39.98 2.83
426 427 9.974980 GATTTTTGATAAGGTTAGGTGAAACAA 57.025 29.630 0.00 0.00 39.98 2.83
431 432 9.575868 TTGATAAGGTTAGGTGAAACAATAACA 57.424 29.630 0.00 0.00 40.33 2.41
432 433 9.747898 TGATAAGGTTAGGTGAAACAATAACAT 57.252 29.630 0.00 0.00 40.33 2.71
437 438 9.528489 AGGTTAGGTGAAACAATAACATTATGT 57.472 29.630 0.00 0.00 40.33 2.29
460 461 8.645814 TGTAGAGATAAAGGTGTAGAGTTTGA 57.354 34.615 0.00 0.00 0.00 2.69
461 462 9.085645 TGTAGAGATAAAGGTGTAGAGTTTGAA 57.914 33.333 0.00 0.00 0.00 2.69
462 463 9.575783 GTAGAGATAAAGGTGTAGAGTTTGAAG 57.424 37.037 0.00 0.00 0.00 3.02
463 464 7.616313 AGAGATAAAGGTGTAGAGTTTGAAGG 58.384 38.462 0.00 0.00 0.00 3.46
464 465 7.455008 AGAGATAAAGGTGTAGAGTTTGAAGGA 59.545 37.037 0.00 0.00 0.00 3.36
465 466 7.974504 AGATAAAGGTGTAGAGTTTGAAGGAA 58.025 34.615 0.00 0.00 0.00 3.36
466 467 8.437575 AGATAAAGGTGTAGAGTTTGAAGGAAA 58.562 33.333 0.00 0.00 0.00 3.13
467 468 6.694877 AAAGGTGTAGAGTTTGAAGGAAAC 57.305 37.500 0.00 0.00 43.89 2.78
476 477 4.577834 GTTTGAAGGAAACGGAATGGAA 57.422 40.909 0.00 0.00 34.87 3.53
477 478 4.295870 GTTTGAAGGAAACGGAATGGAAC 58.704 43.478 0.00 0.00 34.87 3.62
478 479 2.510613 TGAAGGAAACGGAATGGAACC 58.489 47.619 0.00 0.00 0.00 3.62
536 537 0.830648 CCAGAGGCGGGTGAAAGATA 59.169 55.000 0.00 0.00 0.00 1.98
547 548 3.513515 GGGTGAAAGATATTGGTGCCAAA 59.486 43.478 7.81 0.00 39.55 3.28
566 567 3.710209 AACTCAGGGGATTCTTCAGTG 57.290 47.619 0.00 0.00 0.00 3.66
620 621 7.061094 GTGTTTATTTGTGCAAAAGCTAGCTAG 59.939 37.037 19.70 16.84 33.56 3.42
621 622 6.817765 TTATTTGTGCAAAAGCTAGCTAGT 57.182 33.333 19.70 6.32 33.56 2.57
734 775 6.303970 CGAGCAAATAAAGCCGATGAATAATG 59.696 38.462 0.00 0.00 0.00 1.90
747 788 1.003866 GAATAATGTGAACGCCGAGGC 60.004 52.381 3.59 3.59 37.85 4.70
839 905 1.341080 CCCAGGTTCCACATGCTTTT 58.659 50.000 0.00 0.00 0.00 2.27
1167 1248 2.711922 CCCCTTCTCGTGTCTCCCG 61.712 68.421 0.00 0.00 0.00 5.14
1184 1265 3.412408 GCCTCTTCCACCTCCCCC 61.412 72.222 0.00 0.00 0.00 5.40
1247 1328 3.960102 ACCCAAGAACAGCTGATTTTTCA 59.040 39.130 23.35 0.00 0.00 2.69
1250 1331 5.350633 CCAAGAACAGCTGATTTTTCAACA 58.649 37.500 23.35 0.00 0.00 3.33
1293 1374 2.030562 GTGTAGCAGGCGGTGTGT 59.969 61.111 0.00 0.00 0.00 3.72
1295 1376 1.147376 TGTAGCAGGCGGTGTGTTT 59.853 52.632 0.00 0.00 0.00 2.83
1296 1377 0.393448 TGTAGCAGGCGGTGTGTTTA 59.607 50.000 0.00 0.00 0.00 2.01
1352 1433 4.023365 GCTACTGATTCCAGCATGATTTCC 60.023 45.833 0.00 0.00 44.16 3.13
1457 1545 5.308825 CATCTGTACTCCTGTTTTGGTTCT 58.691 41.667 0.00 0.00 0.00 3.01
1458 1546 5.367945 TCTGTACTCCTGTTTTGGTTCTT 57.632 39.130 0.00 0.00 0.00 2.52
1469 1557 6.445357 TGTTTTGGTTCTTGAGTTACTTCC 57.555 37.500 0.00 0.00 0.00 3.46
1523 1614 5.129320 AGCCAGTTTGGATTTTTCTCTTGTT 59.871 36.000 0.00 0.00 40.96 2.83
1621 1712 0.875908 CCGTAGCGGTGACATGGATG 60.876 60.000 0.00 0.00 42.73 3.51
1917 2008 8.038944 TGACAAGGACAACATAAACTAGATACC 58.961 37.037 0.00 0.00 0.00 2.73
1952 2043 5.779529 ACCATGTTGGAATCTATTGCATC 57.220 39.130 0.00 0.00 40.96 3.91
1959 2050 4.129380 TGGAATCTATTGCATCTGGTTCG 58.871 43.478 0.00 0.00 33.04 3.95
1980 2071 3.921021 CGATACTCTTGGAATGGCGATAC 59.079 47.826 0.00 0.00 0.00 2.24
2002 2093 9.705290 GATACATTTTAGAAACCAAAACCACAT 57.295 29.630 0.00 0.00 0.00 3.21
2104 2195 6.560711 AGATTACATTTTAGGCGCGATTTTT 58.439 32.000 12.10 0.00 0.00 1.94
2208 2302 8.915057 ACTCCTCCATTCACAAATATAAGATG 57.085 34.615 0.00 0.00 0.00 2.90
2228 2322 7.954788 AGATGTTCTAACTTTTGTCTGAGTC 57.045 36.000 0.00 0.00 0.00 3.36
2467 2561 8.549338 TTTTGCTTTTATTGATCATGAATGCA 57.451 26.923 16.09 16.09 38.81 3.96
2483 2577 6.621316 TGAATGCATGCTTTTTCAACATTT 57.379 29.167 20.33 0.00 31.33 2.32
2637 2739 8.021396 GTCCCTGAAGTTGATTTAATGTAACAC 58.979 37.037 0.00 0.00 0.00 3.32
2693 2795 4.751600 CCGCTCAAAAGATCATATGCAGTA 59.248 41.667 0.00 0.00 0.00 2.74
2727 2829 6.901357 CACTTTTTGCTGCATTTTCTTTGTAC 59.099 34.615 1.84 0.00 0.00 2.90
2730 2832 3.626977 TGCTGCATTTTCTTTGTACACG 58.373 40.909 0.00 0.00 0.00 4.49
2733 2835 3.626977 TGCATTTTCTTTGTACACGCAG 58.373 40.909 0.00 0.00 0.00 5.18
2735 2837 4.041723 GCATTTTCTTTGTACACGCAGTT 58.958 39.130 0.00 0.00 41.61 3.16
2737 2839 5.554324 GCATTTTCTTTGTACACGCAGTTTG 60.554 40.000 0.00 0.00 41.61 2.93
2739 2841 4.688511 TTCTTTGTACACGCAGTTTGTT 57.311 36.364 0.00 0.00 41.61 2.83
2740 2842 4.009798 TCTTTGTACACGCAGTTTGTTG 57.990 40.909 0.00 0.00 41.61 3.33
2741 2843 2.181426 TTGTACACGCAGTTTGTTGC 57.819 45.000 0.00 0.00 41.61 4.17
2742 2844 0.378962 TGTACACGCAGTTTGTTGCC 59.621 50.000 0.00 0.00 41.61 4.52
2743 2845 0.661020 GTACACGCAGTTTGTTGCCT 59.339 50.000 0.00 0.00 41.61 4.75
2744 2846 1.064952 GTACACGCAGTTTGTTGCCTT 59.935 47.619 0.00 0.00 41.61 4.35
2745 2847 0.100503 ACACGCAGTTTGTTGCCTTC 59.899 50.000 0.00 0.00 41.61 3.46
2746 2848 0.381801 CACGCAGTTTGTTGCCTTCT 59.618 50.000 0.00 0.00 41.61 2.85
2747 2849 0.381801 ACGCAGTTTGTTGCCTTCTG 59.618 50.000 0.00 0.00 37.78 3.02
2748 2850 0.662619 CGCAGTTTGTTGCCTTCTGA 59.337 50.000 0.00 0.00 41.01 3.27
2749 2851 1.267806 CGCAGTTTGTTGCCTTCTGAT 59.732 47.619 0.00 0.00 41.01 2.90
2750 2852 2.669364 GCAGTTTGTTGCCTTCTGATG 58.331 47.619 0.00 0.00 38.13 3.07
2751 2853 2.035066 GCAGTTTGTTGCCTTCTGATGT 59.965 45.455 0.00 0.00 38.13 3.06
2752 2854 3.635331 CAGTTTGTTGCCTTCTGATGTG 58.365 45.455 0.00 0.00 0.00 3.21
2753 2855 2.035066 AGTTTGTTGCCTTCTGATGTGC 59.965 45.455 0.00 0.00 0.00 4.57
2754 2856 1.985473 TTGTTGCCTTCTGATGTGCT 58.015 45.000 0.00 0.00 0.00 4.40
2755 2857 1.985473 TGTTGCCTTCTGATGTGCTT 58.015 45.000 0.00 0.00 0.00 3.91
2756 2858 1.881973 TGTTGCCTTCTGATGTGCTTC 59.118 47.619 0.00 0.00 0.00 3.86
2757 2859 2.157738 GTTGCCTTCTGATGTGCTTCT 58.842 47.619 0.00 0.00 0.00 2.85
2758 2860 3.244526 TGTTGCCTTCTGATGTGCTTCTA 60.245 43.478 0.00 0.00 0.00 2.10
2759 2861 3.920231 TGCCTTCTGATGTGCTTCTAT 57.080 42.857 0.00 0.00 0.00 1.98
2760 2862 4.226427 TGCCTTCTGATGTGCTTCTATT 57.774 40.909 0.00 0.00 0.00 1.73
2761 2863 4.592942 TGCCTTCTGATGTGCTTCTATTT 58.407 39.130 0.00 0.00 0.00 1.40
2915 3017 2.417558 AAAGCAGGTGAGGTGAGGCC 62.418 60.000 0.00 0.00 37.58 5.19
3019 3122 5.296283 TCGACCTGTTTAAATTTTTCGACCA 59.704 36.000 0.00 0.00 29.78 4.02
3074 3177 6.870769 TGTGGCTAACTTAGAATGGTACTAC 58.129 40.000 0.00 0.00 0.00 2.73
3080 3183 7.201679 GCTAACTTAGAATGGTACTACGTCAGA 60.202 40.741 0.00 0.00 0.00 3.27
3095 3198 4.130118 ACGTCAGATGCAAGAAGAAAACT 58.870 39.130 0.00 0.00 0.00 2.66
3169 3272 6.582295 TGCAGACAATTTTCGAAAAGCTATTC 59.418 34.615 25.87 17.01 0.00 1.75
3339 3443 5.452255 ACGGTCTTATACAGTATTCCCTCA 58.548 41.667 0.00 0.00 34.49 3.86
3340 3444 5.535406 ACGGTCTTATACAGTATTCCCTCAG 59.465 44.000 0.00 0.00 34.49 3.35
3377 3481 7.341445 AGAGTGTATAGATCACTTGAACTCC 57.659 40.000 0.00 0.00 44.68 3.85
3378 3482 6.322712 AGAGTGTATAGATCACTTGAACTCCC 59.677 42.308 0.00 0.00 44.68 4.30
3379 3483 6.198639 AGTGTATAGATCACTTGAACTCCCT 58.801 40.000 0.00 0.00 42.50 4.20
3380 3484 6.322712 AGTGTATAGATCACTTGAACTCCCTC 59.677 42.308 0.00 0.00 42.50 4.30
3381 3485 5.598830 TGTATAGATCACTTGAACTCCCTCC 59.401 44.000 0.00 0.00 0.00 4.30
3382 3486 2.907892 AGATCACTTGAACTCCCTCCA 58.092 47.619 0.00 0.00 0.00 3.86
3383 3487 3.458831 AGATCACTTGAACTCCCTCCAT 58.541 45.455 0.00 0.00 0.00 3.41
3384 3488 3.848975 AGATCACTTGAACTCCCTCCATT 59.151 43.478 0.00 0.00 0.00 3.16
3385 3489 4.290722 AGATCACTTGAACTCCCTCCATTT 59.709 41.667 0.00 0.00 0.00 2.32
3386 3490 5.488919 AGATCACTTGAACTCCCTCCATTTA 59.511 40.000 0.00 0.00 0.00 1.40
3387 3491 5.165961 TCACTTGAACTCCCTCCATTTAG 57.834 43.478 0.00 0.00 0.00 1.85
3388 3492 4.597507 TCACTTGAACTCCCTCCATTTAGT 59.402 41.667 0.00 0.00 0.00 2.24
3389 3493 4.938226 CACTTGAACTCCCTCCATTTAGTC 59.062 45.833 0.00 0.00 0.00 2.59
3390 3494 4.846940 ACTTGAACTCCCTCCATTTAGTCT 59.153 41.667 0.00 0.00 0.00 3.24
3391 3495 5.310857 ACTTGAACTCCCTCCATTTAGTCTT 59.689 40.000 0.00 0.00 0.00 3.01
3392 3496 5.843019 TGAACTCCCTCCATTTAGTCTTT 57.157 39.130 0.00 0.00 0.00 2.52
3393 3497 5.560724 TGAACTCCCTCCATTTAGTCTTTG 58.439 41.667 0.00 0.00 0.00 2.77
3394 3498 4.576330 ACTCCCTCCATTTAGTCTTTGG 57.424 45.455 0.00 0.00 0.00 3.28
3395 3499 4.175962 ACTCCCTCCATTTAGTCTTTGGA 58.824 43.478 0.00 0.00 37.20 3.53
3404 3508 7.689299 TCCATTTAGTCTTTGGAGAGATTTCA 58.311 34.615 0.00 0.00 34.65 2.69
3405 3509 8.331740 TCCATTTAGTCTTTGGAGAGATTTCAT 58.668 33.333 0.00 0.00 34.65 2.57
3406 3510 8.964772 CCATTTAGTCTTTGGAGAGATTTCATT 58.035 33.333 0.00 0.00 31.94 2.57
3413 3517 9.267084 GTCTTTGGAGAGATTTCATTATAGACC 57.733 37.037 0.00 0.00 31.07 3.85
3414 3518 8.992349 TCTTTGGAGAGATTTCATTATAGACCA 58.008 33.333 0.00 0.00 0.00 4.02
3415 3519 8.964476 TTTGGAGAGATTTCATTATAGACCAC 57.036 34.615 0.00 0.00 0.00 4.16
3416 3520 7.675161 TGGAGAGATTTCATTATAGACCACA 57.325 36.000 0.00 0.00 0.00 4.17
3417 3521 8.267620 TGGAGAGATTTCATTATAGACCACAT 57.732 34.615 0.00 0.00 0.00 3.21
3418 3522 8.717717 TGGAGAGATTTCATTATAGACCACATT 58.282 33.333 0.00 0.00 0.00 2.71
3419 3523 9.566432 GGAGAGATTTCATTATAGACCACATTT 57.434 33.333 0.00 0.00 0.00 2.32
3424 3528 9.455847 GATTTCATTATAGACCACATTTGAAGC 57.544 33.333 0.00 0.00 0.00 3.86
3425 3529 7.936496 TTCATTATAGACCACATTTGAAGCA 57.064 32.000 0.00 0.00 0.00 3.91
3426 3530 7.936496 TCATTATAGACCACATTTGAAGCAA 57.064 32.000 0.00 0.00 0.00 3.91
3427 3531 8.347004 TCATTATAGACCACATTTGAAGCAAA 57.653 30.769 0.00 0.00 37.75 3.68
3428 3532 8.801299 TCATTATAGACCACATTTGAAGCAAAA 58.199 29.630 0.00 0.00 36.90 2.44
3429 3533 9.590451 CATTATAGACCACATTTGAAGCAAAAT 57.410 29.630 0.00 0.00 36.90 1.82
3431 3535 5.534207 AGACCACATTTGAAGCAAAATGA 57.466 34.783 20.02 0.00 46.13 2.57
3432 3536 5.535333 AGACCACATTTGAAGCAAAATGAG 58.465 37.500 20.02 14.31 46.13 2.90
3433 3537 5.069516 AGACCACATTTGAAGCAAAATGAGT 59.930 36.000 20.02 16.64 46.13 3.41
3434 3538 5.051816 ACCACATTTGAAGCAAAATGAGTG 58.948 37.500 20.02 11.88 46.13 3.51
3435 3539 5.163426 ACCACATTTGAAGCAAAATGAGTGA 60.163 36.000 20.02 0.00 46.13 3.41
3436 3540 5.754406 CCACATTTGAAGCAAAATGAGTGAA 59.246 36.000 20.02 0.00 46.13 3.18
3437 3541 6.425721 CCACATTTGAAGCAAAATGAGTGAAT 59.574 34.615 20.02 1.41 46.13 2.57
3438 3542 7.359765 CCACATTTGAAGCAAAATGAGTGAATC 60.360 37.037 20.02 0.00 46.13 2.52
3439 3543 7.384115 CACATTTGAAGCAAAATGAGTGAATCT 59.616 33.333 20.02 0.33 46.13 2.40
3440 3544 8.579006 ACATTTGAAGCAAAATGAGTGAATCTA 58.421 29.630 20.02 0.00 46.13 1.98
3441 3545 8.857216 CATTTGAAGCAAAATGAGTGAATCTAC 58.143 33.333 11.88 0.00 46.13 2.59
3442 3546 7.509141 TTGAAGCAAAATGAGTGAATCTACA 57.491 32.000 0.00 0.00 0.00 2.74
3443 3547 6.902341 TGAAGCAAAATGAGTGAATCTACAC 58.098 36.000 0.00 0.00 40.60 2.90
3477 3581 7.739825 ACATCTATATACATCCATATGTGGGC 58.260 38.462 8.84 0.00 45.99 5.36
3478 3582 6.747414 TCTATATACATCCATATGTGGGCC 57.253 41.667 8.84 0.00 45.99 5.80
3479 3583 6.209026 TCTATATACATCCATATGTGGGCCA 58.791 40.000 0.00 0.00 45.99 5.36
3480 3584 5.999987 ATATACATCCATATGTGGGCCAT 57.000 39.130 10.70 0.00 45.99 4.40
3481 3585 8.016054 TCTATATACATCCATATGTGGGCCATA 58.984 37.037 10.70 7.76 45.99 2.74
3482 3586 5.794767 ATACATCCATATGTGGGCCATAA 57.205 39.130 10.70 0.85 45.99 1.90
3483 3587 4.680278 ACATCCATATGTGGGCCATAAT 57.320 40.909 10.70 9.85 44.79 1.28
3484 3588 5.794767 ACATCCATATGTGGGCCATAATA 57.205 39.130 10.70 11.94 44.79 0.98
3485 3589 5.759059 ACATCCATATGTGGGCCATAATAG 58.241 41.667 10.70 0.48 44.79 1.73
3486 3590 5.492162 ACATCCATATGTGGGCCATAATAGA 59.508 40.000 10.70 6.56 44.79 1.98
3487 3591 6.011717 ACATCCATATGTGGGCCATAATAGAA 60.012 38.462 10.70 1.98 44.79 2.10
3488 3592 6.656965 TCCATATGTGGGCCATAATAGAAT 57.343 37.500 10.70 0.00 46.06 2.40
3489 3593 6.662755 TCCATATGTGGGCCATAATAGAATC 58.337 40.000 10.70 0.00 46.06 2.52
3490 3594 6.448061 TCCATATGTGGGCCATAATAGAATCT 59.552 38.462 10.70 0.00 46.06 2.40
3491 3595 6.769822 CCATATGTGGGCCATAATAGAATCTC 59.230 42.308 10.70 0.00 42.11 2.75
3492 3596 7.366281 CCATATGTGGGCCATAATAGAATCTCT 60.366 40.741 10.70 0.00 42.11 3.10
3493 3597 8.708378 CATATGTGGGCCATAATAGAATCTCTA 58.292 37.037 10.70 0.00 39.43 2.43
3494 3598 6.360370 TGTGGGCCATAATAGAATCTCTAC 57.640 41.667 10.70 0.00 30.79 2.59
3495 3599 5.843969 TGTGGGCCATAATAGAATCTCTACA 59.156 40.000 10.70 0.00 30.79 2.74
3496 3600 6.501805 TGTGGGCCATAATAGAATCTCTACAT 59.498 38.462 10.70 0.00 30.79 2.29
3497 3601 7.678171 TGTGGGCCATAATAGAATCTCTACATA 59.322 37.037 10.70 0.00 30.79 2.29
3498 3602 8.200792 GTGGGCCATAATAGAATCTCTACATAG 58.799 40.741 10.70 0.00 30.79 2.23
3499 3603 7.901322 TGGGCCATAATAGAATCTCTACATAGT 59.099 37.037 0.00 0.00 30.79 2.12
3500 3604 9.422681 GGGCCATAATAGAATCTCTACATAGTA 57.577 37.037 4.39 0.00 30.79 1.82
3587 3691 5.961398 TTTTCCCGAATATTACAGAGGGA 57.039 39.130 9.64 9.64 45.31 4.20
3589 3693 4.194678 TCCCGAATATTACAGAGGGAGT 57.805 45.455 9.64 0.00 42.46 3.85
3590 3694 5.329191 TCCCGAATATTACAGAGGGAGTA 57.671 43.478 9.64 0.00 42.46 2.59
3591 3695 5.075493 TCCCGAATATTACAGAGGGAGTAC 58.925 45.833 9.64 0.00 42.46 2.73
3592 3696 5.078256 CCCGAATATTACAGAGGGAGTACT 58.922 45.833 0.00 0.00 41.26 2.73
3593 3697 6.044754 TCCCGAATATTACAGAGGGAGTACTA 59.955 42.308 0.00 0.00 42.46 1.82
3594 3698 6.890814 CCCGAATATTACAGAGGGAGTACTAT 59.109 42.308 0.00 0.00 41.26 2.12
3595 3699 8.051535 CCCGAATATTACAGAGGGAGTACTATA 58.948 40.741 0.00 0.00 41.26 1.31
3596 3700 8.891720 CCGAATATTACAGAGGGAGTACTATAC 58.108 40.741 0.00 0.00 0.00 1.47
3597 3701 9.445878 CGAATATTACAGAGGGAGTACTATACA 57.554 37.037 0.00 0.00 0.00 2.29
3601 3705 8.871629 ATTACAGAGGGAGTACTATACATCAG 57.128 38.462 0.00 0.00 0.00 2.90
3602 3706 5.074115 ACAGAGGGAGTACTATACATCAGC 58.926 45.833 0.00 0.00 0.00 4.26
3603 3707 5.163034 ACAGAGGGAGTACTATACATCAGCT 60.163 44.000 0.00 0.00 0.00 4.24
3604 3708 5.772672 CAGAGGGAGTACTATACATCAGCTT 59.227 44.000 0.00 0.00 0.00 3.74
3605 3709 6.266558 CAGAGGGAGTACTATACATCAGCTTT 59.733 42.308 0.00 0.00 0.00 3.51
3606 3710 6.266558 AGAGGGAGTACTATACATCAGCTTTG 59.733 42.308 0.00 0.00 0.00 2.77
3607 3711 5.900123 AGGGAGTACTATACATCAGCTTTGT 59.100 40.000 0.00 4.58 0.00 2.83
3608 3712 6.384305 AGGGAGTACTATACATCAGCTTTGTT 59.616 38.462 0.00 0.00 0.00 2.83
3609 3713 7.563924 AGGGAGTACTATACATCAGCTTTGTTA 59.436 37.037 0.00 0.00 0.00 2.41
3610 3714 7.868415 GGGAGTACTATACATCAGCTTTGTTAG 59.132 40.741 0.00 8.47 0.00 2.34
3611 3715 7.868415 GGAGTACTATACATCAGCTTTGTTAGG 59.132 40.741 0.00 0.00 0.00 2.69
3612 3716 8.534954 AGTACTATACATCAGCTTTGTTAGGA 57.465 34.615 4.48 2.01 0.00 2.94
3613 3717 8.978472 AGTACTATACATCAGCTTTGTTAGGAA 58.022 33.333 4.48 0.00 0.00 3.36
3614 3718 9.765795 GTACTATACATCAGCTTTGTTAGGAAT 57.234 33.333 4.48 0.00 0.00 3.01
3625 3729 9.508567 CAGCTTTGTTAGGAATAAAATTAGAGC 57.491 33.333 0.00 0.00 0.00 4.09
3626 3730 9.243105 AGCTTTGTTAGGAATAAAATTAGAGCA 57.757 29.630 0.00 0.00 0.00 4.26
3627 3731 9.290483 GCTTTGTTAGGAATAAAATTAGAGCAC 57.710 33.333 0.00 0.00 0.00 4.40
3631 3735 9.733556 TGTTAGGAATAAAATTAGAGCACTTGA 57.266 29.630 0.00 0.00 0.00 3.02
3681 3785 7.893124 TTAAGGAACCGACTATGTATTCTCT 57.107 36.000 0.00 0.00 0.00 3.10
3682 3786 8.985315 TTAAGGAACCGACTATGTATTCTCTA 57.015 34.615 0.00 0.00 0.00 2.43
3683 3787 7.893124 AAGGAACCGACTATGTATTCTCTAA 57.107 36.000 0.00 0.00 0.00 2.10
3684 3788 7.274603 AGGAACCGACTATGTATTCTCTAAC 57.725 40.000 0.00 0.00 0.00 2.34
3685 3789 7.061688 AGGAACCGACTATGTATTCTCTAACT 58.938 38.462 0.00 0.00 0.00 2.24
3686 3790 8.216423 AGGAACCGACTATGTATTCTCTAACTA 58.784 37.037 0.00 0.00 0.00 2.24
3687 3791 8.288913 GGAACCGACTATGTATTCTCTAACTAC 58.711 40.741 0.00 0.00 0.00 2.73
3688 3792 8.977267 AACCGACTATGTATTCTCTAACTACT 57.023 34.615 0.00 0.00 0.00 2.57
3690 3794 9.709495 ACCGACTATGTATTCTCTAACTACTAG 57.291 37.037 0.00 0.00 0.00 2.57
3691 3795 9.926158 CCGACTATGTATTCTCTAACTACTAGA 57.074 37.037 0.00 0.00 35.27 2.43
3697 3801 9.635404 ATGTATTCTCTAACTACTAGAAGCAGT 57.365 33.333 0.00 0.00 36.17 4.40
3698 3802 9.463902 TGTATTCTCTAACTACTAGAAGCAGTT 57.536 33.333 0.00 3.15 36.17 3.16
3699 3803 9.724839 GTATTCTCTAACTACTAGAAGCAGTTG 57.275 37.037 0.00 0.00 33.12 3.16
3700 3804 7.762588 TTCTCTAACTACTAGAAGCAGTTGT 57.237 36.000 0.00 0.00 33.12 3.32
3701 3805 8.859236 TTCTCTAACTACTAGAAGCAGTTGTA 57.141 34.615 0.00 0.00 33.12 2.41
3702 3806 8.266392 TCTCTAACTACTAGAAGCAGTTGTAC 57.734 38.462 0.00 0.00 33.12 2.90
3703 3807 8.102047 TCTCTAACTACTAGAAGCAGTTGTACT 58.898 37.037 0.00 0.00 33.12 2.73
3704 3808 8.632906 TCTAACTACTAGAAGCAGTTGTACTT 57.367 34.615 0.00 0.00 33.12 2.24
3705 3809 8.728833 TCTAACTACTAGAAGCAGTTGTACTTC 58.271 37.037 0.00 0.00 42.13 3.01
3706 3810 6.270156 ACTACTAGAAGCAGTTGTACTTCC 57.730 41.667 0.00 0.00 42.67 3.46
3707 3811 6.011481 ACTACTAGAAGCAGTTGTACTTCCT 58.989 40.000 0.00 0.00 42.67 3.36
3708 3812 5.394224 ACTAGAAGCAGTTGTACTTCCTC 57.606 43.478 0.00 0.00 42.67 3.71
3709 3813 5.081032 ACTAGAAGCAGTTGTACTTCCTCT 58.919 41.667 0.00 0.00 42.67 3.69
3710 3814 4.529109 AGAAGCAGTTGTACTTCCTCTC 57.471 45.455 0.00 0.00 42.67 3.20
3711 3815 4.156477 AGAAGCAGTTGTACTTCCTCTCT 58.844 43.478 0.00 0.00 42.67 3.10
3712 3816 4.219725 AGAAGCAGTTGTACTTCCTCTCTC 59.780 45.833 0.00 0.00 42.67 3.20
3713 3817 3.501349 AGCAGTTGTACTTCCTCTCTCA 58.499 45.455 0.00 0.00 0.00 3.27
3714 3818 4.093011 AGCAGTTGTACTTCCTCTCTCAT 58.907 43.478 0.00 0.00 0.00 2.90
3715 3819 4.081752 AGCAGTTGTACTTCCTCTCTCATG 60.082 45.833 0.00 0.00 0.00 3.07
3716 3820 4.322349 GCAGTTGTACTTCCTCTCTCATGT 60.322 45.833 0.00 0.00 0.00 3.21
3717 3821 5.788450 CAGTTGTACTTCCTCTCTCATGTT 58.212 41.667 0.00 0.00 0.00 2.71
3718 3822 6.572509 GCAGTTGTACTTCCTCTCTCATGTTA 60.573 42.308 0.00 0.00 0.00 2.41
3719 3823 7.032580 CAGTTGTACTTCCTCTCTCATGTTAG 58.967 42.308 0.00 0.00 0.00 2.34
3720 3824 5.584253 TGTACTTCCTCTCTCATGTTAGC 57.416 43.478 0.00 0.00 0.00 3.09
3721 3825 5.016831 TGTACTTCCTCTCTCATGTTAGCA 58.983 41.667 0.00 0.00 0.00 3.49
3722 3826 5.480422 TGTACTTCCTCTCTCATGTTAGCAA 59.520 40.000 0.00 0.00 0.00 3.91
3723 3827 4.826556 ACTTCCTCTCTCATGTTAGCAAC 58.173 43.478 0.00 0.00 0.00 4.17
3724 3828 4.530161 ACTTCCTCTCTCATGTTAGCAACT 59.470 41.667 0.00 0.00 0.00 3.16
3725 3829 4.462508 TCCTCTCTCATGTTAGCAACTG 57.537 45.455 0.00 0.00 0.00 3.16
3726 3830 2.935201 CCTCTCTCATGTTAGCAACTGC 59.065 50.000 0.00 0.00 42.49 4.40
3748 3852 6.095947 GCTTAGTGCAGTTACTGTTATGTC 57.904 41.667 14.23 0.00 42.31 3.06
3749 3853 5.869888 GCTTAGTGCAGTTACTGTTATGTCT 59.130 40.000 14.23 6.35 42.31 3.41
3750 3854 6.035112 GCTTAGTGCAGTTACTGTTATGTCTC 59.965 42.308 14.23 0.00 42.31 3.36
3751 3855 5.468540 AGTGCAGTTACTGTTATGTCTCA 57.531 39.130 14.23 0.00 33.43 3.27
3752 3856 5.230942 AGTGCAGTTACTGTTATGTCTCAC 58.769 41.667 14.23 10.16 33.43 3.51
3753 3857 4.090066 GTGCAGTTACTGTTATGTCTCACG 59.910 45.833 14.23 0.00 33.43 4.35
3754 3858 3.060895 GCAGTTACTGTTATGTCTCACGC 59.939 47.826 14.23 0.00 33.43 5.34
3755 3859 4.234574 CAGTTACTGTTATGTCTCACGCA 58.765 43.478 3.88 0.00 0.00 5.24
3756 3860 4.864806 CAGTTACTGTTATGTCTCACGCAT 59.135 41.667 3.88 0.00 0.00 4.73
3757 3861 5.348724 CAGTTACTGTTATGTCTCACGCATT 59.651 40.000 3.88 0.00 0.00 3.56
3758 3862 6.530181 CAGTTACTGTTATGTCTCACGCATTA 59.470 38.462 3.88 0.00 0.00 1.90
3759 3863 6.752351 AGTTACTGTTATGTCTCACGCATTAG 59.248 38.462 0.00 0.00 0.00 1.73
3760 3864 3.865745 ACTGTTATGTCTCACGCATTAGC 59.134 43.478 0.00 0.00 37.42 3.09
3761 3865 3.855858 TGTTATGTCTCACGCATTAGCA 58.144 40.909 0.00 0.00 42.27 3.49
3762 3866 4.249661 TGTTATGTCTCACGCATTAGCAA 58.750 39.130 0.00 0.00 42.27 3.91
3763 3867 4.092821 TGTTATGTCTCACGCATTAGCAAC 59.907 41.667 0.00 0.00 42.27 4.17
3764 3868 1.438651 TGTCTCACGCATTAGCAACC 58.561 50.000 0.00 0.00 42.27 3.77
3765 3869 0.370273 GTCTCACGCATTAGCAACCG 59.630 55.000 0.00 0.00 42.27 4.44
3766 3870 1.060937 CTCACGCATTAGCAACCGC 59.939 57.895 0.00 0.00 42.27 5.68
3785 3889 3.052940 GCTGCTTGCGGTTAGAAATAC 57.947 47.619 3.26 0.00 0.00 1.89
3786 3890 2.678336 GCTGCTTGCGGTTAGAAATACT 59.322 45.455 3.26 0.00 0.00 2.12
3787 3891 3.242446 GCTGCTTGCGGTTAGAAATACTC 60.242 47.826 3.26 0.00 0.00 2.59
3788 3892 4.184629 CTGCTTGCGGTTAGAAATACTCT 58.815 43.478 0.00 0.00 38.28 3.24
3789 3893 4.181578 TGCTTGCGGTTAGAAATACTCTC 58.818 43.478 0.00 0.00 35.41 3.20
3790 3894 4.181578 GCTTGCGGTTAGAAATACTCTCA 58.818 43.478 0.00 0.00 35.41 3.27
3791 3895 4.033014 GCTTGCGGTTAGAAATACTCTCAC 59.967 45.833 0.00 0.00 35.41 3.51
3792 3896 4.794278 TGCGGTTAGAAATACTCTCACA 57.206 40.909 0.00 0.00 35.41 3.58
3793 3897 5.142061 TGCGGTTAGAAATACTCTCACAA 57.858 39.130 0.00 0.00 35.41 3.33
3794 3898 5.543714 TGCGGTTAGAAATACTCTCACAAA 58.456 37.500 0.00 0.00 35.41 2.83
3795 3899 6.170506 TGCGGTTAGAAATACTCTCACAAAT 58.829 36.000 0.00 0.00 35.41 2.32
3796 3900 6.653320 TGCGGTTAGAAATACTCTCACAAATT 59.347 34.615 0.00 0.00 35.41 1.82
3797 3901 7.174253 TGCGGTTAGAAATACTCTCACAAATTT 59.826 33.333 0.00 0.00 35.41 1.82
3798 3902 7.481798 GCGGTTAGAAATACTCTCACAAATTTG 59.518 37.037 16.67 16.67 35.41 2.32
3799 3903 8.504005 CGGTTAGAAATACTCTCACAAATTTGT 58.496 33.333 18.13 18.13 37.47 2.83
3822 3926 9.938280 TTGTAACTGTATATATAGTGCCCAATC 57.062 33.333 12.36 1.35 0.00 2.67
3823 3927 9.095700 TGTAACTGTATATATAGTGCCCAATCA 57.904 33.333 12.36 3.41 0.00 2.57
3824 3928 9.938280 GTAACTGTATATATAGTGCCCAATCAA 57.062 33.333 12.36 0.00 0.00 2.57
3826 3930 9.453572 AACTGTATATATAGTGCCCAATCAATG 57.546 33.333 12.36 0.00 0.00 2.82
3827 3931 8.825774 ACTGTATATATAGTGCCCAATCAATGA 58.174 33.333 11.01 0.00 0.00 2.57
3828 3932 9.322773 CTGTATATATAGTGCCCAATCAATGAG 57.677 37.037 0.00 0.00 0.00 2.90
3829 3933 9.045745 TGTATATATAGTGCCCAATCAATGAGA 57.954 33.333 0.00 0.00 0.00 3.27
3830 3934 9.890629 GTATATATAGTGCCCAATCAATGAGAA 57.109 33.333 0.00 0.00 0.00 2.87
3832 3936 7.934855 ATATAGTGCCCAATCAATGAGAATC 57.065 36.000 0.00 0.00 0.00 2.52
3882 3986 9.494479 TTTCACTTTATACGTTATCAGTACTCG 57.506 33.333 0.00 0.00 0.00 4.18
3883 3987 7.128331 TCACTTTATACGTTATCAGTACTCGC 58.872 38.462 0.00 0.00 0.00 5.03
3884 3988 7.011763 TCACTTTATACGTTATCAGTACTCGCT 59.988 37.037 0.00 0.00 0.00 4.93
3885 3989 7.320797 CACTTTATACGTTATCAGTACTCGCTC 59.679 40.741 0.00 0.00 0.00 5.03
3886 3990 7.226325 ACTTTATACGTTATCAGTACTCGCTCT 59.774 37.037 0.00 0.00 0.00 4.09
3887 3991 3.677190 ACGTTATCAGTACTCGCTCTG 57.323 47.619 0.00 0.00 0.00 3.35
3888 3992 2.223294 ACGTTATCAGTACTCGCTCTGC 60.223 50.000 0.00 0.00 0.00 4.26
3889 3993 2.733517 GTTATCAGTACTCGCTCTGCC 58.266 52.381 0.00 0.00 0.00 4.85
3890 3994 0.945099 TATCAGTACTCGCTCTGCCG 59.055 55.000 0.00 0.00 0.00 5.69
3891 3995 0.748367 ATCAGTACTCGCTCTGCCGA 60.748 55.000 0.00 0.00 35.68 5.54
3904 4008 2.407210 GCCGAGAGCGACAGAGAG 59.593 66.667 0.00 0.00 40.82 3.20
3905 4009 2.407210 CCGAGAGCGACAGAGAGC 59.593 66.667 0.00 0.00 40.82 4.09
3906 4010 2.407210 CGAGAGCGACAGAGAGCC 59.593 66.667 0.00 0.00 40.82 4.70
3907 4011 2.402572 CGAGAGCGACAGAGAGCCA 61.403 63.158 0.00 0.00 40.82 4.75
3908 4012 1.723608 CGAGAGCGACAGAGAGCCAT 61.724 60.000 0.00 0.00 40.82 4.40
3909 4013 0.030638 GAGAGCGACAGAGAGCCATC 59.969 60.000 0.00 0.00 0.00 3.51
3910 4014 0.682532 AGAGCGACAGAGAGCCATCA 60.683 55.000 0.00 0.00 0.00 3.07
3911 4015 0.527385 GAGCGACAGAGAGCCATCAC 60.527 60.000 0.00 0.00 0.00 3.06
3912 4016 1.216444 GCGACAGAGAGCCATCACA 59.784 57.895 0.00 0.00 0.00 3.58
3913 4017 0.805322 GCGACAGAGAGCCATCACAG 60.805 60.000 0.00 0.00 0.00 3.66
3914 4018 0.179116 CGACAGAGAGCCATCACAGG 60.179 60.000 0.00 0.00 0.00 4.00
3915 4019 1.189752 GACAGAGAGCCATCACAGGA 58.810 55.000 0.00 0.00 0.00 3.86
3916 4020 1.552337 GACAGAGAGCCATCACAGGAA 59.448 52.381 0.00 0.00 0.00 3.36
3917 4021 1.980765 ACAGAGAGCCATCACAGGAAA 59.019 47.619 0.00 0.00 0.00 3.13
3918 4022 2.027377 ACAGAGAGCCATCACAGGAAAG 60.027 50.000 0.00 0.00 0.00 2.62
3919 4023 1.558756 AGAGAGCCATCACAGGAAAGG 59.441 52.381 0.00 0.00 0.00 3.11
3920 4024 1.280421 GAGAGCCATCACAGGAAAGGT 59.720 52.381 0.00 0.00 0.00 3.50
3921 4025 2.501723 GAGAGCCATCACAGGAAAGGTA 59.498 50.000 0.00 0.00 0.00 3.08
3922 4026 2.912956 AGAGCCATCACAGGAAAGGTAA 59.087 45.455 0.00 0.00 0.00 2.85
3923 4027 3.054802 AGAGCCATCACAGGAAAGGTAAG 60.055 47.826 0.00 0.00 0.00 2.34
3924 4028 2.912956 AGCCATCACAGGAAAGGTAAGA 59.087 45.455 0.00 0.00 0.00 2.10
3925 4029 3.330701 AGCCATCACAGGAAAGGTAAGAA 59.669 43.478 0.00 0.00 0.00 2.52
3926 4030 4.018050 AGCCATCACAGGAAAGGTAAGAAT 60.018 41.667 0.00 0.00 0.00 2.40
3927 4031 4.096984 GCCATCACAGGAAAGGTAAGAATG 59.903 45.833 0.00 0.00 0.00 2.67
3928 4032 4.641989 CCATCACAGGAAAGGTAAGAATGG 59.358 45.833 0.00 0.00 0.00 3.16
3929 4033 3.686016 TCACAGGAAAGGTAAGAATGGC 58.314 45.455 0.00 0.00 0.00 4.40
3930 4034 3.073798 TCACAGGAAAGGTAAGAATGGCA 59.926 43.478 0.00 0.00 0.00 4.92
3931 4035 3.441572 CACAGGAAAGGTAAGAATGGCAG 59.558 47.826 0.00 0.00 0.00 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 8.610248 TTTTCCGTTTCAGTCAATTCATACTA 57.390 30.769 0.00 0.00 0.00 1.82
35 36 6.586082 ACATTTGCATATTTTCCGTTTCAGTC 59.414 34.615 0.00 0.00 0.00 3.51
46 47 7.440856 AGTTCGTTTTCCACATTTGCATATTTT 59.559 29.630 0.00 0.00 0.00 1.82
50 51 5.446143 AGTTCGTTTTCCACATTTGCATA 57.554 34.783 0.00 0.00 0.00 3.14
57 58 8.718734 GTCTTCTATTTAGTTCGTTTTCCACAT 58.281 33.333 0.00 0.00 0.00 3.21
65 66 7.411588 GCATGTTCGTCTTCTATTTAGTTCGTT 60.412 37.037 0.00 0.00 0.00 3.85
77 78 1.802960 CAGCAAGCATGTTCGTCTTCT 59.197 47.619 0.00 0.00 0.00 2.85
87 88 1.062148 CATGTCGTCTCAGCAAGCATG 59.938 52.381 0.00 0.00 0.00 4.06
96 97 2.289010 ACTTGTCATGCATGTCGTCTCA 60.289 45.455 25.43 13.06 30.78 3.27
104 105 4.665212 GACAACCATACTTGTCATGCATG 58.335 43.478 21.07 21.07 46.38 4.06
140 141 7.935210 ACAATCATGCAAGGATTTTCTTTCTTT 59.065 29.630 12.72 0.00 46.42 2.52
141 142 7.386848 CACAATCATGCAAGGATTTTCTTTCTT 59.613 33.333 12.72 0.00 46.42 2.52
153 154 1.200716 ACTTCGCACAATCATGCAAGG 59.799 47.619 0.00 0.00 46.47 3.61
161 162 2.202349 GCCGCACTTCGCACAATC 60.202 61.111 0.00 0.00 42.60 2.67
233 234 4.107029 TCCACTACTGGACCGGTG 57.893 61.111 14.63 0.00 42.15 4.94
261 262 1.067821 CAATCTCTACTCCGTCCAGCC 59.932 57.143 0.00 0.00 0.00 4.85
271 272 4.586841 GTGATAGTCCTGCCAATCTCTACT 59.413 45.833 0.00 0.00 0.00 2.57
280 281 0.752658 CCGATGTGATAGTCCTGCCA 59.247 55.000 0.00 0.00 0.00 4.92
282 283 1.858091 CACCGATGTGATAGTCCTGC 58.142 55.000 0.00 0.00 45.76 4.85
290 291 2.696989 TGATTCTGCACCGATGTGAT 57.303 45.000 0.00 0.00 45.76 3.06
299 300 3.165058 TGTACTCGGATGATTCTGCAC 57.835 47.619 0.00 0.00 0.00 4.57
308 309 2.827800 AGGATGCATGTACTCGGATG 57.172 50.000 2.46 0.00 0.00 3.51
317 318 4.702131 GGTTTCTCTGTTAAGGATGCATGT 59.298 41.667 2.46 0.00 0.00 3.21
328 329 5.560722 TGATGGAGTTGGTTTCTCTGTTA 57.439 39.130 0.00 0.00 33.06 2.41
332 333 6.550854 TGAAATTTGATGGAGTTGGTTTCTCT 59.449 34.615 0.00 0.00 33.06 3.10
358 359 6.944557 TTACTCGTGACAATCATGTAACTG 57.055 37.500 0.00 0.00 38.59 3.16
366 367 7.122204 TCTCTATTCCTTTACTCGTGACAATCA 59.878 37.037 0.00 0.00 0.00 2.57
367 368 7.481642 TCTCTATTCCTTTACTCGTGACAATC 58.518 38.462 0.00 0.00 0.00 2.67
434 435 9.256228 TCAAACTCTACACCTTTATCTCTACAT 57.744 33.333 0.00 0.00 0.00 2.29
435 436 8.645814 TCAAACTCTACACCTTTATCTCTACA 57.354 34.615 0.00 0.00 0.00 2.74
436 437 9.575783 CTTCAAACTCTACACCTTTATCTCTAC 57.424 37.037 0.00 0.00 0.00 2.59
437 438 8.750298 CCTTCAAACTCTACACCTTTATCTCTA 58.250 37.037 0.00 0.00 0.00 2.43
438 439 7.455008 TCCTTCAAACTCTACACCTTTATCTCT 59.545 37.037 0.00 0.00 0.00 3.10
439 440 7.612677 TCCTTCAAACTCTACACCTTTATCTC 58.387 38.462 0.00 0.00 0.00 2.75
440 441 7.554959 TCCTTCAAACTCTACACCTTTATCT 57.445 36.000 0.00 0.00 0.00 1.98
441 442 8.504815 GTTTCCTTCAAACTCTACACCTTTATC 58.495 37.037 0.00 0.00 41.25 1.75
442 443 7.172703 CGTTTCCTTCAAACTCTACACCTTTAT 59.827 37.037 0.00 0.00 42.17 1.40
443 444 6.480981 CGTTTCCTTCAAACTCTACACCTTTA 59.519 38.462 0.00 0.00 42.17 1.85
444 445 5.296035 CGTTTCCTTCAAACTCTACACCTTT 59.704 40.000 0.00 0.00 42.17 3.11
445 446 4.814771 CGTTTCCTTCAAACTCTACACCTT 59.185 41.667 0.00 0.00 42.17 3.50
446 447 4.377897 CGTTTCCTTCAAACTCTACACCT 58.622 43.478 0.00 0.00 42.17 4.00
447 448 3.497262 CCGTTTCCTTCAAACTCTACACC 59.503 47.826 0.00 0.00 42.17 4.16
448 449 4.374399 TCCGTTTCCTTCAAACTCTACAC 58.626 43.478 0.00 0.00 42.17 2.90
449 450 4.675976 TCCGTTTCCTTCAAACTCTACA 57.324 40.909 0.00 0.00 42.17 2.74
450 451 5.106673 CCATTCCGTTTCCTTCAAACTCTAC 60.107 44.000 0.00 0.00 42.17 2.59
451 452 5.001232 CCATTCCGTTTCCTTCAAACTCTA 58.999 41.667 0.00 0.00 42.17 2.43
452 453 3.821033 CCATTCCGTTTCCTTCAAACTCT 59.179 43.478 0.00 0.00 42.17 3.24
453 454 3.818773 TCCATTCCGTTTCCTTCAAACTC 59.181 43.478 0.00 0.00 42.17 3.01
454 455 3.827722 TCCATTCCGTTTCCTTCAAACT 58.172 40.909 0.00 0.00 42.17 2.66
455 456 4.295870 GTTCCATTCCGTTTCCTTCAAAC 58.704 43.478 0.00 0.00 41.08 2.93
456 457 3.319689 GGTTCCATTCCGTTTCCTTCAAA 59.680 43.478 0.00 0.00 0.00 2.69
457 458 2.888414 GGTTCCATTCCGTTTCCTTCAA 59.112 45.455 0.00 0.00 0.00 2.69
458 459 2.510613 GGTTCCATTCCGTTTCCTTCA 58.489 47.619 0.00 0.00 0.00 3.02
459 460 1.467342 CGGTTCCATTCCGTTTCCTTC 59.533 52.381 0.00 0.00 42.62 3.46
460 461 1.072648 TCGGTTCCATTCCGTTTCCTT 59.927 47.619 4.36 0.00 46.86 3.36
461 462 0.688487 TCGGTTCCATTCCGTTTCCT 59.312 50.000 4.36 0.00 46.86 3.36
462 463 0.800631 GTCGGTTCCATTCCGTTTCC 59.199 55.000 4.36 0.00 46.86 3.13
463 464 1.515081 TGTCGGTTCCATTCCGTTTC 58.485 50.000 4.36 0.00 46.86 2.78
464 465 2.194201 ATGTCGGTTCCATTCCGTTT 57.806 45.000 4.36 0.00 46.86 3.60
465 466 2.194201 AATGTCGGTTCCATTCCGTT 57.806 45.000 4.36 0.00 46.86 4.44
466 467 2.194201 AAATGTCGGTTCCATTCCGT 57.806 45.000 4.36 0.00 46.86 4.69
468 469 4.783764 AAGAAAATGTCGGTTCCATTCC 57.216 40.909 0.00 0.00 31.49 3.01
469 470 6.699642 TGAAAAAGAAAATGTCGGTTCCATTC 59.300 34.615 0.00 0.00 31.49 2.67
470 471 6.578023 TGAAAAAGAAAATGTCGGTTCCATT 58.422 32.000 0.00 0.00 34.07 3.16
471 472 6.155475 TGAAAAAGAAAATGTCGGTTCCAT 57.845 33.333 0.00 0.00 0.00 3.41
472 473 5.584253 TGAAAAAGAAAATGTCGGTTCCA 57.416 34.783 0.00 0.00 0.00 3.53
473 474 7.344441 CAAATGAAAAAGAAAATGTCGGTTCC 58.656 34.615 0.00 0.00 0.00 3.62
474 475 7.011016 ACCAAATGAAAAAGAAAATGTCGGTTC 59.989 33.333 0.00 0.00 0.00 3.62
475 476 6.821160 ACCAAATGAAAAAGAAAATGTCGGTT 59.179 30.769 0.00 0.00 0.00 4.44
476 477 6.257630 CACCAAATGAAAAAGAAAATGTCGGT 59.742 34.615 0.00 0.00 0.00 4.69
477 478 6.292811 CCACCAAATGAAAAAGAAAATGTCGG 60.293 38.462 0.00 0.00 0.00 4.79
478 479 6.648502 CCACCAAATGAAAAAGAAAATGTCG 58.351 36.000 0.00 0.00 0.00 4.35
479 480 6.260714 AGCCACCAAATGAAAAAGAAAATGTC 59.739 34.615 0.00 0.00 0.00 3.06
480 481 6.038492 CAGCCACCAAATGAAAAAGAAAATGT 59.962 34.615 0.00 0.00 0.00 2.71
481 482 6.432107 CAGCCACCAAATGAAAAAGAAAATG 58.568 36.000 0.00 0.00 0.00 2.32
482 483 5.008911 GCAGCCACCAAATGAAAAAGAAAAT 59.991 36.000 0.00 0.00 0.00 1.82
483 484 4.335037 GCAGCCACCAAATGAAAAAGAAAA 59.665 37.500 0.00 0.00 0.00 2.29
484 485 3.876320 GCAGCCACCAAATGAAAAAGAAA 59.124 39.130 0.00 0.00 0.00 2.52
485 486 3.134442 AGCAGCCACCAAATGAAAAAGAA 59.866 39.130 0.00 0.00 0.00 2.52
486 487 2.699846 AGCAGCCACCAAATGAAAAAGA 59.300 40.909 0.00 0.00 0.00 2.52
487 488 3.062042 GAGCAGCCACCAAATGAAAAAG 58.938 45.455 0.00 0.00 0.00 2.27
525 526 2.733956 TGGCACCAATATCTTTCACCC 58.266 47.619 0.00 0.00 0.00 4.61
532 533 3.624777 CCTGAGTTTGGCACCAATATCT 58.375 45.455 2.31 2.84 35.70 1.98
536 537 0.542702 CCCCTGAGTTTGGCACCAAT 60.543 55.000 2.31 0.00 35.70 3.16
547 548 2.625639 ACACTGAAGAATCCCCTGAGT 58.374 47.619 0.00 0.00 0.00 3.41
585 586 5.282510 TGCACAAATAAACACCCGTAAAAG 58.717 37.500 0.00 0.00 0.00 2.27
589 590 4.913335 TTTGCACAAATAAACACCCGTA 57.087 36.364 0.00 0.00 0.00 4.02
592 593 4.466567 GCTTTTGCACAAATAAACACCC 57.533 40.909 0.00 0.00 46.58 4.61
621 622 7.817478 AGATCACATTACAAGTCACGTTAATGA 59.183 33.333 17.82 2.95 0.00 2.57
747 788 4.694233 AGCCACAGTGCTCGCCTG 62.694 66.667 0.00 6.04 36.75 4.85
839 905 9.899661 TTTAAGCATAGCTCTGACCTATAAAAA 57.100 29.630 2.78 0.00 38.25 1.94
844 910 5.221742 GGGTTTAAGCATAGCTCTGACCTAT 60.222 44.000 2.78 0.00 38.25 2.57
853 934 2.027561 TGACACGGGTTTAAGCATAGCT 60.028 45.455 0.00 0.00 42.56 3.32
903 984 1.057851 TAGTATTTCCCTGGGCCGGG 61.058 60.000 25.52 25.52 46.13 5.73
913 994 3.493873 GGGTGGGTCGATGTAGTATTTCC 60.494 52.174 0.00 0.00 0.00 3.13
1167 1248 3.412408 GGGGGAGGTGGAAGAGGC 61.412 72.222 0.00 0.00 0.00 4.70
1223 1304 2.206576 AATCAGCTGTTCTTGGGTCC 57.793 50.000 14.67 0.00 0.00 4.46
1293 1374 7.104043 ACGGCTACATGTCAGTAACTATAAA 57.896 36.000 0.00 0.00 0.00 1.40
1295 1376 6.704289 AACGGCTACATGTCAGTAACTATA 57.296 37.500 0.00 0.00 0.00 1.31
1296 1377 5.593679 AACGGCTACATGTCAGTAACTAT 57.406 39.130 0.00 0.00 0.00 2.12
1394 1475 2.147958 CGAACCTTCCGTGATTGGAAA 58.852 47.619 0.00 0.00 46.95 3.13
1440 1528 5.367945 ACTCAAGAACCAAAACAGGAGTA 57.632 39.130 0.00 0.00 33.01 2.59
1457 1545 2.819608 GCATTGCAGGGAAGTAACTCAA 59.180 45.455 3.15 0.00 0.00 3.02
1458 1546 2.040278 AGCATTGCAGGGAAGTAACTCA 59.960 45.455 11.91 0.00 0.00 3.41
1523 1614 6.954684 ACTGTGTCCTTCTCCTTTATCTAGAA 59.045 38.462 0.00 0.00 0.00 2.10
1621 1712 6.736853 GTCAAAACTCGCATTGTAGTTGATAC 59.263 38.462 7.14 3.76 36.12 2.24
1952 2043 4.122776 CCATTCCAAGAGTATCGAACCAG 58.877 47.826 0.00 0.00 42.67 4.00
1959 2050 4.883083 TGTATCGCCATTCCAAGAGTATC 58.117 43.478 0.00 0.00 0.00 2.24
1980 2071 8.207521 ACAATGTGGTTTTGGTTTCTAAAATG 57.792 30.769 0.00 0.00 30.62 2.32
2002 2093 6.929049 CCTACTCTCACAATACAAGTCAACAA 59.071 38.462 0.00 0.00 0.00 2.83
2104 2195 5.451937 GCATTAGCGGATCCTGCTATATACA 60.452 44.000 27.48 17.98 43.90 2.29
2208 2302 5.287226 TCCGACTCAGACAAAAGTTAGAAC 58.713 41.667 0.00 0.00 0.00 3.01
2226 2320 8.072567 ACTAAAACGTGTCTATATACATCCGAC 58.927 37.037 7.85 0.00 0.00 4.79
2228 2322 7.859377 ACACTAAAACGTGTCTATATACATCCG 59.141 37.037 0.00 0.00 44.32 4.18
2500 2594 3.346315 CAACAGGTGGAGCAACATGATA 58.654 45.455 0.00 0.00 35.47 2.15
2637 2739 9.318041 CGAATGACAGTACAAGAAAATTGTAAG 57.682 33.333 2.25 2.09 36.74 2.34
2643 2745 4.759693 TGCCGAATGACAGTACAAGAAAAT 59.240 37.500 0.00 0.00 0.00 1.82
2702 2804 5.871539 ACAAAGAAAATGCAGCAAAAAGTG 58.128 33.333 0.00 0.00 0.00 3.16
2704 2806 6.901357 GTGTACAAAGAAAATGCAGCAAAAAG 59.099 34.615 0.00 0.00 0.00 2.27
2727 2829 0.381801 AGAAGGCAACAAACTGCGTG 59.618 50.000 0.00 0.00 43.60 5.34
2730 2832 2.035066 ACATCAGAAGGCAACAAACTGC 59.965 45.455 0.00 0.00 41.85 4.40
2733 2835 2.035066 AGCACATCAGAAGGCAACAAAC 59.965 45.455 0.00 0.00 41.41 2.93
2734 2836 2.309613 AGCACATCAGAAGGCAACAAA 58.690 42.857 0.00 0.00 41.41 2.83
2735 2837 1.985473 AGCACATCAGAAGGCAACAA 58.015 45.000 0.00 0.00 41.41 2.83
2737 2839 2.157738 AGAAGCACATCAGAAGGCAAC 58.842 47.619 0.00 0.00 0.00 4.17
2739 2841 3.920231 ATAGAAGCACATCAGAAGGCA 57.080 42.857 0.00 0.00 0.00 4.75
2740 2842 5.449725 GGAAAATAGAAGCACATCAGAAGGC 60.450 44.000 0.00 0.00 0.00 4.35
2741 2843 5.067023 GGGAAAATAGAAGCACATCAGAAGG 59.933 44.000 0.00 0.00 0.00 3.46
2742 2844 5.649395 TGGGAAAATAGAAGCACATCAGAAG 59.351 40.000 0.00 0.00 0.00 2.85
2743 2845 5.569355 TGGGAAAATAGAAGCACATCAGAA 58.431 37.500 0.00 0.00 0.00 3.02
2744 2846 5.178096 TGGGAAAATAGAAGCACATCAGA 57.822 39.130 0.00 0.00 0.00 3.27
2745 2847 6.461110 AATGGGAAAATAGAAGCACATCAG 57.539 37.500 0.00 0.00 0.00 2.90
2746 2848 7.560991 ACATAATGGGAAAATAGAAGCACATCA 59.439 33.333 0.00 0.00 0.00 3.07
2747 2849 7.945134 ACATAATGGGAAAATAGAAGCACATC 58.055 34.615 0.00 0.00 0.00 3.06
2748 2850 7.902920 ACATAATGGGAAAATAGAAGCACAT 57.097 32.000 0.00 0.00 0.00 3.21
2749 2851 8.849168 CATACATAATGGGAAAATAGAAGCACA 58.151 33.333 0.00 0.00 31.38 4.57
2750 2852 9.066892 TCATACATAATGGGAAAATAGAAGCAC 57.933 33.333 0.00 0.00 36.15 4.40
2751 2853 9.812347 ATCATACATAATGGGAAAATAGAAGCA 57.188 29.630 0.00 0.00 36.15 3.91
2915 3017 5.218885 CGAACACCTATAGCTCATCTTCAG 58.781 45.833 0.00 0.00 0.00 3.02
2954 3056 4.395625 TGACCGGAGTATCATCGTCTATT 58.604 43.478 9.46 0.00 36.25 1.73
3074 3177 4.739046 AGTTTTCTTCTTGCATCTGACG 57.261 40.909 0.00 0.00 0.00 4.35
3121 3224 3.368427 CCGAGCAGGTTCATCTAACTGAA 60.368 47.826 0.00 0.00 38.23 3.02
3148 3251 6.237045 CGCAGAATAGCTTTTCGAAAATTGTC 60.237 38.462 22.73 15.03 0.00 3.18
3152 3255 4.438744 CCCGCAGAATAGCTTTTCGAAAAT 60.439 41.667 22.73 12.27 0.00 1.82
3169 3272 2.361104 TTAAGCCCAAGCCCGCAG 60.361 61.111 0.00 0.00 41.25 5.18
3275 3379 6.584185 AGTTTAGCAATTCGGGTTAAACAT 57.416 33.333 12.85 1.33 41.48 2.71
3278 3382 4.996122 TCGAGTTTAGCAATTCGGGTTAAA 59.004 37.500 2.60 0.00 41.27 1.52
3284 3388 5.062934 TGTTATGTCGAGTTTAGCAATTCGG 59.937 40.000 2.60 0.00 41.27 4.30
3353 3457 6.322712 GGGAGTTCAAGTGATCTATACACTCT 59.677 42.308 0.00 0.00 46.01 3.24
3354 3458 6.322712 AGGGAGTTCAAGTGATCTATACACTC 59.677 42.308 0.00 0.00 46.01 3.51
3356 3460 6.461788 GGAGGGAGTTCAAGTGATCTATACAC 60.462 46.154 0.00 0.00 38.38 2.90
3360 3464 4.624913 TGGAGGGAGTTCAAGTGATCTAT 58.375 43.478 0.00 0.00 0.00 1.98
3372 3476 4.601857 TCCAAAGACTAAATGGAGGGAGTT 59.398 41.667 1.46 0.00 38.30 3.01
3373 3477 4.175962 TCCAAAGACTAAATGGAGGGAGT 58.824 43.478 1.46 0.00 38.30 3.85
3374 3478 4.844349 TCCAAAGACTAAATGGAGGGAG 57.156 45.455 1.46 0.00 38.30 4.30
3379 3483 7.689299 TGAAATCTCTCCAAAGACTAAATGGA 58.311 34.615 4.90 4.90 40.84 3.41
3380 3484 7.928307 TGAAATCTCTCCAAAGACTAAATGG 57.072 36.000 0.00 0.00 35.49 3.16
3387 3491 9.267084 GGTCTATAATGAAATCTCTCCAAAGAC 57.733 37.037 0.00 0.00 0.00 3.01
3388 3492 8.992349 TGGTCTATAATGAAATCTCTCCAAAGA 58.008 33.333 0.00 0.00 0.00 2.52
3389 3493 9.050601 GTGGTCTATAATGAAATCTCTCCAAAG 57.949 37.037 0.00 0.00 0.00 2.77
3390 3494 8.548025 TGTGGTCTATAATGAAATCTCTCCAAA 58.452 33.333 0.00 0.00 0.00 3.28
3391 3495 8.089625 TGTGGTCTATAATGAAATCTCTCCAA 57.910 34.615 0.00 0.00 0.00 3.53
3392 3496 7.675161 TGTGGTCTATAATGAAATCTCTCCA 57.325 36.000 0.00 0.00 0.00 3.86
3393 3497 9.566432 AAATGTGGTCTATAATGAAATCTCTCC 57.434 33.333 0.00 0.00 0.00 3.71
3398 3502 9.455847 GCTTCAAATGTGGTCTATAATGAAATC 57.544 33.333 0.00 0.00 0.00 2.17
3399 3503 8.970020 TGCTTCAAATGTGGTCTATAATGAAAT 58.030 29.630 0.00 0.00 0.00 2.17
3400 3504 8.347004 TGCTTCAAATGTGGTCTATAATGAAA 57.653 30.769 0.00 0.00 0.00 2.69
3401 3505 7.936496 TGCTTCAAATGTGGTCTATAATGAA 57.064 32.000 0.00 0.00 0.00 2.57
3402 3506 7.936496 TTGCTTCAAATGTGGTCTATAATGA 57.064 32.000 0.00 0.00 0.00 2.57
3403 3507 8.984891 TTTTGCTTCAAATGTGGTCTATAATG 57.015 30.769 0.00 0.00 33.19 1.90
3404 3508 9.590451 CATTTTGCTTCAAATGTGGTCTATAAT 57.410 29.630 7.87 0.00 33.19 1.28
3405 3509 8.801299 TCATTTTGCTTCAAATGTGGTCTATAA 58.199 29.630 13.08 0.00 33.19 0.98
3406 3510 8.347004 TCATTTTGCTTCAAATGTGGTCTATA 57.653 30.769 13.08 0.00 33.19 1.31
3407 3511 7.039504 ACTCATTTTGCTTCAAATGTGGTCTAT 60.040 33.333 16.20 1.51 33.19 1.98
3408 3512 6.265196 ACTCATTTTGCTTCAAATGTGGTCTA 59.735 34.615 16.20 1.46 33.19 2.59
3409 3513 5.069516 ACTCATTTTGCTTCAAATGTGGTCT 59.930 36.000 16.20 1.97 33.19 3.85
3410 3514 5.176223 CACTCATTTTGCTTCAAATGTGGTC 59.824 40.000 16.20 0.00 33.19 4.02
3411 3515 5.051816 CACTCATTTTGCTTCAAATGTGGT 58.948 37.500 16.20 12.74 33.19 4.16
3412 3516 5.291178 TCACTCATTTTGCTTCAAATGTGG 58.709 37.500 16.20 12.36 33.19 4.17
3413 3517 6.831727 TTCACTCATTTTGCTTCAAATGTG 57.168 33.333 13.08 12.97 33.19 3.21
3414 3518 7.439381 AGATTCACTCATTTTGCTTCAAATGT 58.561 30.769 13.08 0.00 33.19 2.71
3415 3519 7.884816 AGATTCACTCATTTTGCTTCAAATG 57.115 32.000 9.18 9.18 33.19 2.32
3416 3520 8.579006 TGTAGATTCACTCATTTTGCTTCAAAT 58.421 29.630 0.00 0.00 33.19 2.32
3417 3521 7.862372 GTGTAGATTCACTCATTTTGCTTCAAA 59.138 33.333 0.00 0.00 35.68 2.69
3418 3522 7.229306 AGTGTAGATTCACTCATTTTGCTTCAA 59.771 33.333 0.00 0.00 44.07 2.69
3419 3523 6.712095 AGTGTAGATTCACTCATTTTGCTTCA 59.288 34.615 0.00 0.00 44.07 3.02
3420 3524 7.138692 AGTGTAGATTCACTCATTTTGCTTC 57.861 36.000 0.00 0.00 44.07 3.86
3466 3570 6.666678 AGATTCTATTATGGCCCACATATGG 58.333 40.000 7.80 0.00 46.81 2.74
3467 3571 7.571919 AGAGATTCTATTATGGCCCACATATG 58.428 38.462 0.00 0.00 41.49 1.78
3468 3572 7.761981 AGAGATTCTATTATGGCCCACATAT 57.238 36.000 0.00 0.00 41.49 1.78
3469 3573 7.678171 TGTAGAGATTCTATTATGGCCCACATA 59.322 37.037 0.00 0.00 40.23 2.29
3470 3574 6.501805 TGTAGAGATTCTATTATGGCCCACAT 59.498 38.462 0.00 0.00 36.10 3.21
3471 3575 5.843969 TGTAGAGATTCTATTATGGCCCACA 59.156 40.000 0.00 0.00 30.76 4.17
3472 3576 6.360370 TGTAGAGATTCTATTATGGCCCAC 57.640 41.667 0.00 0.00 30.76 4.61
3473 3577 7.901322 ACTATGTAGAGATTCTATTATGGCCCA 59.099 37.037 0.00 0.00 30.76 5.36
3474 3578 8.312669 ACTATGTAGAGATTCTATTATGGCCC 57.687 38.462 0.00 0.00 30.76 5.80
3564 3668 6.069847 ACTCCCTCTGTAATATTCGGGAAAAA 60.070 38.462 0.00 0.00 40.00 1.94
3565 3669 5.427481 ACTCCCTCTGTAATATTCGGGAAAA 59.573 40.000 0.00 0.00 40.00 2.29
3566 3670 4.966805 ACTCCCTCTGTAATATTCGGGAAA 59.033 41.667 0.00 0.00 40.00 3.13
3567 3671 4.553678 ACTCCCTCTGTAATATTCGGGAA 58.446 43.478 0.00 0.00 40.00 3.97
3568 3672 4.194678 ACTCCCTCTGTAATATTCGGGA 57.805 45.455 0.00 0.00 38.33 5.14
3569 3673 5.078256 AGTACTCCCTCTGTAATATTCGGG 58.922 45.833 0.00 0.00 0.00 5.14
3570 3674 7.941431 ATAGTACTCCCTCTGTAATATTCGG 57.059 40.000 0.00 0.00 30.23 4.30
3571 3675 9.445878 TGTATAGTACTCCCTCTGTAATATTCG 57.554 37.037 0.00 0.00 34.44 3.34
3575 3679 9.961264 CTGATGTATAGTACTCCCTCTGTAATA 57.039 37.037 0.00 0.00 0.00 0.98
3576 3680 7.394923 GCTGATGTATAGTACTCCCTCTGTAAT 59.605 40.741 0.00 0.00 0.00 1.89
3577 3681 6.715718 GCTGATGTATAGTACTCCCTCTGTAA 59.284 42.308 0.00 0.00 0.00 2.41
3578 3682 6.044520 AGCTGATGTATAGTACTCCCTCTGTA 59.955 42.308 0.00 0.00 0.00 2.74
3579 3683 5.074115 GCTGATGTATAGTACTCCCTCTGT 58.926 45.833 0.00 0.00 0.00 3.41
3580 3684 5.321102 AGCTGATGTATAGTACTCCCTCTG 58.679 45.833 0.00 0.00 0.00 3.35
3581 3685 5.592587 AGCTGATGTATAGTACTCCCTCT 57.407 43.478 0.00 0.00 0.00 3.69
3582 3686 6.041069 ACAAAGCTGATGTATAGTACTCCCTC 59.959 42.308 0.00 0.00 0.00 4.30
3583 3687 5.900123 ACAAAGCTGATGTATAGTACTCCCT 59.100 40.000 0.00 0.00 0.00 4.20
3584 3688 6.163135 ACAAAGCTGATGTATAGTACTCCC 57.837 41.667 0.00 0.00 0.00 4.30
3585 3689 7.868415 CCTAACAAAGCTGATGTATAGTACTCC 59.132 40.741 0.00 0.00 0.00 3.85
3586 3690 8.630917 TCCTAACAAAGCTGATGTATAGTACTC 58.369 37.037 0.00 0.00 0.00 2.59
3587 3691 8.534954 TCCTAACAAAGCTGATGTATAGTACT 57.465 34.615 0.00 0.00 0.00 2.73
3588 3692 9.765795 ATTCCTAACAAAGCTGATGTATAGTAC 57.234 33.333 5.89 0.00 0.00 2.73
3599 3703 9.508567 GCTCTAATTTTATTCCTAACAAAGCTG 57.491 33.333 0.00 0.00 0.00 4.24
3600 3704 9.243105 TGCTCTAATTTTATTCCTAACAAAGCT 57.757 29.630 0.00 0.00 0.00 3.74
3601 3705 9.290483 GTGCTCTAATTTTATTCCTAACAAAGC 57.710 33.333 0.00 0.00 0.00 3.51
3605 3709 9.733556 TCAAGTGCTCTAATTTTATTCCTAACA 57.266 29.630 0.00 0.00 0.00 2.41
3652 3756 9.420551 GAATACATAGTCGGTTCCTTAATTAGG 57.579 37.037 0.00 0.00 46.27 2.69
3655 3759 8.925338 AGAGAATACATAGTCGGTTCCTTAATT 58.075 33.333 0.00 0.00 0.00 1.40
3656 3760 8.480133 AGAGAATACATAGTCGGTTCCTTAAT 57.520 34.615 0.00 0.00 0.00 1.40
3657 3761 7.893124 AGAGAATACATAGTCGGTTCCTTAA 57.107 36.000 0.00 0.00 0.00 1.85
3658 3762 8.844244 GTTAGAGAATACATAGTCGGTTCCTTA 58.156 37.037 0.00 0.00 0.00 2.69
3659 3763 7.560626 AGTTAGAGAATACATAGTCGGTTCCTT 59.439 37.037 0.00 0.00 0.00 3.36
3660 3764 7.061688 AGTTAGAGAATACATAGTCGGTTCCT 58.938 38.462 0.00 0.00 0.00 3.36
3661 3765 7.274603 AGTTAGAGAATACATAGTCGGTTCC 57.725 40.000 0.00 0.00 0.00 3.62
3662 3766 9.054922 AGTAGTTAGAGAATACATAGTCGGTTC 57.945 37.037 0.00 0.00 0.00 3.62
3663 3767 8.977267 AGTAGTTAGAGAATACATAGTCGGTT 57.023 34.615 0.00 0.00 0.00 4.44
3664 3768 9.709495 CTAGTAGTTAGAGAATACATAGTCGGT 57.291 37.037 0.00 0.00 0.00 4.69
3665 3769 9.926158 TCTAGTAGTTAGAGAATACATAGTCGG 57.074 37.037 0.00 0.00 33.42 4.79
3671 3775 9.635404 ACTGCTTCTAGTAGTTAGAGAATACAT 57.365 33.333 8.85 0.00 37.96 2.29
3672 3776 9.463902 AACTGCTTCTAGTAGTTAGAGAATACA 57.536 33.333 8.16 0.00 46.78 2.29
3673 3777 9.724839 CAACTGCTTCTAGTAGTTAGAGAATAC 57.275 37.037 9.34 0.00 46.90 1.89
3674 3778 9.463902 ACAACTGCTTCTAGTAGTTAGAGAATA 57.536 33.333 9.34 0.00 46.90 1.75
3675 3779 8.356000 ACAACTGCTTCTAGTAGTTAGAGAAT 57.644 34.615 9.34 0.00 46.90 2.40
3676 3780 7.762588 ACAACTGCTTCTAGTAGTTAGAGAA 57.237 36.000 9.34 0.00 46.90 2.87
3677 3781 8.102047 AGTACAACTGCTTCTAGTAGTTAGAGA 58.898 37.037 9.34 0.00 46.90 3.10
3678 3782 8.271312 AGTACAACTGCTTCTAGTAGTTAGAG 57.729 38.462 9.34 2.15 46.90 2.43
3679 3783 8.632906 AAGTACAACTGCTTCTAGTAGTTAGA 57.367 34.615 9.34 0.00 46.90 2.10
3680 3784 7.969508 GGAAGTACAACTGCTTCTAGTAGTTAG 59.030 40.741 9.34 7.38 46.90 2.34
3681 3785 7.668886 AGGAAGTACAACTGCTTCTAGTAGTTA 59.331 37.037 9.34 0.00 46.90 2.24
3683 3787 6.011481 AGGAAGTACAACTGCTTCTAGTAGT 58.989 40.000 0.00 0.00 43.08 2.73
3684 3788 6.376018 AGAGGAAGTACAACTGCTTCTAGTAG 59.624 42.308 0.00 0.00 38.32 2.57
3685 3789 6.246919 AGAGGAAGTACAACTGCTTCTAGTA 58.753 40.000 0.00 0.00 38.32 1.82
3686 3790 5.081032 AGAGGAAGTACAACTGCTTCTAGT 58.919 41.667 0.00 0.00 38.32 2.57
3687 3791 5.417580 AGAGAGGAAGTACAACTGCTTCTAG 59.582 44.000 0.00 0.00 39.99 2.43
3688 3792 5.326069 AGAGAGGAAGTACAACTGCTTCTA 58.674 41.667 0.00 0.00 39.99 2.10
3689 3793 4.156477 AGAGAGGAAGTACAACTGCTTCT 58.844 43.478 0.00 0.00 42.32 2.85
3690 3794 4.021894 TGAGAGAGGAAGTACAACTGCTTC 60.022 45.833 0.00 0.00 40.07 3.86
3691 3795 3.898123 TGAGAGAGGAAGTACAACTGCTT 59.102 43.478 0.00 0.00 0.00 3.91
3692 3796 3.501349 TGAGAGAGGAAGTACAACTGCT 58.499 45.455 0.00 0.00 0.00 4.24
3693 3797 3.944055 TGAGAGAGGAAGTACAACTGC 57.056 47.619 0.00 0.00 0.00 4.40
3694 3798 5.398603 ACATGAGAGAGGAAGTACAACTG 57.601 43.478 0.00 0.00 0.00 3.16
3695 3799 6.350612 GCTAACATGAGAGAGGAAGTACAACT 60.351 42.308 0.00 0.00 0.00 3.16
3696 3800 5.808030 GCTAACATGAGAGAGGAAGTACAAC 59.192 44.000 0.00 0.00 0.00 3.32
3697 3801 5.480422 TGCTAACATGAGAGAGGAAGTACAA 59.520 40.000 0.00 0.00 0.00 2.41
3698 3802 5.016831 TGCTAACATGAGAGAGGAAGTACA 58.983 41.667 0.00 0.00 0.00 2.90
3699 3803 5.584253 TGCTAACATGAGAGAGGAAGTAC 57.416 43.478 0.00 0.00 0.00 2.73
3700 3804 5.717178 AGTTGCTAACATGAGAGAGGAAGTA 59.283 40.000 0.00 0.00 0.00 2.24
3701 3805 4.530161 AGTTGCTAACATGAGAGAGGAAGT 59.470 41.667 0.00 0.00 0.00 3.01
3702 3806 4.869297 CAGTTGCTAACATGAGAGAGGAAG 59.131 45.833 0.00 0.00 0.00 3.46
3703 3807 4.825422 CAGTTGCTAACATGAGAGAGGAA 58.175 43.478 0.00 0.00 0.00 3.36
3704 3808 3.368843 GCAGTTGCTAACATGAGAGAGGA 60.369 47.826 0.00 0.00 38.21 3.71
3705 3809 2.935201 GCAGTTGCTAACATGAGAGAGG 59.065 50.000 0.00 0.00 38.21 3.69
3725 3829 5.869888 AGACATAACAGTAACTGCACTAAGC 59.130 40.000 0.00 0.00 45.96 3.09
3726 3830 7.062371 GTGAGACATAACAGTAACTGCACTAAG 59.938 40.741 0.00 0.00 34.37 2.18
3727 3831 6.866770 GTGAGACATAACAGTAACTGCACTAA 59.133 38.462 0.00 0.00 34.37 2.24
3728 3832 6.387465 GTGAGACATAACAGTAACTGCACTA 58.613 40.000 0.00 0.00 34.37 2.74
3729 3833 5.230942 GTGAGACATAACAGTAACTGCACT 58.769 41.667 0.00 0.00 34.37 4.40
3730 3834 4.090066 CGTGAGACATAACAGTAACTGCAC 59.910 45.833 0.00 0.00 34.37 4.57
3731 3835 4.234574 CGTGAGACATAACAGTAACTGCA 58.765 43.478 0.00 0.00 34.37 4.41
3732 3836 3.060895 GCGTGAGACATAACAGTAACTGC 59.939 47.826 0.00 0.00 34.37 4.40
3733 3837 4.234574 TGCGTGAGACATAACAGTAACTG 58.765 43.478 0.00 0.00 37.52 3.16
3734 3838 4.514781 TGCGTGAGACATAACAGTAACT 57.485 40.909 0.00 0.00 0.00 2.24
3735 3839 5.779806 AATGCGTGAGACATAACAGTAAC 57.220 39.130 0.00 0.00 0.00 2.50
3736 3840 5.518847 GCTAATGCGTGAGACATAACAGTAA 59.481 40.000 0.00 0.00 0.00 2.24
3737 3841 5.041287 GCTAATGCGTGAGACATAACAGTA 58.959 41.667 0.00 0.00 0.00 2.74
3738 3842 3.865745 GCTAATGCGTGAGACATAACAGT 59.134 43.478 0.00 0.00 0.00 3.55
3739 3843 3.865164 TGCTAATGCGTGAGACATAACAG 59.135 43.478 0.00 0.00 43.34 3.16
3740 3844 3.855858 TGCTAATGCGTGAGACATAACA 58.144 40.909 0.00 0.00 43.34 2.41
3741 3845 4.494199 GGTTGCTAATGCGTGAGACATAAC 60.494 45.833 0.00 0.00 43.34 1.89
3742 3846 3.621268 GGTTGCTAATGCGTGAGACATAA 59.379 43.478 0.00 0.00 43.34 1.90
3743 3847 3.194861 GGTTGCTAATGCGTGAGACATA 58.805 45.455 0.00 0.00 43.34 2.29
3744 3848 2.009774 GGTTGCTAATGCGTGAGACAT 58.990 47.619 0.00 0.00 43.34 3.06
3745 3849 1.438651 GGTTGCTAATGCGTGAGACA 58.561 50.000 0.00 0.00 43.34 3.41
3746 3850 0.370273 CGGTTGCTAATGCGTGAGAC 59.630 55.000 0.00 0.00 43.34 3.36
3747 3851 1.358725 GCGGTTGCTAATGCGTGAGA 61.359 55.000 0.00 0.00 43.34 3.27
3748 3852 1.060937 GCGGTTGCTAATGCGTGAG 59.939 57.895 0.00 0.00 43.34 3.51
3749 3853 3.173853 GCGGTTGCTAATGCGTGA 58.826 55.556 0.00 0.00 43.34 4.35
3765 3869 2.678336 AGTATTTCTAACCGCAAGCAGC 59.322 45.455 0.00 0.00 40.87 5.25
3766 3870 4.184629 AGAGTATTTCTAACCGCAAGCAG 58.815 43.478 0.00 0.00 33.23 4.24
3767 3871 4.181578 GAGAGTATTTCTAACCGCAAGCA 58.818 43.478 0.00 0.00 35.87 3.91
3768 3872 4.033014 GTGAGAGTATTTCTAACCGCAAGC 59.967 45.833 0.00 0.00 35.87 4.01
3769 3873 5.168569 TGTGAGAGTATTTCTAACCGCAAG 58.831 41.667 0.00 0.00 36.55 4.01
3770 3874 5.142061 TGTGAGAGTATTTCTAACCGCAA 57.858 39.130 0.00 0.00 36.55 4.85
3771 3875 4.794278 TGTGAGAGTATTTCTAACCGCA 57.206 40.909 0.00 0.00 36.55 5.69
3772 3876 6.663944 ATTTGTGAGAGTATTTCTAACCGC 57.336 37.500 0.00 0.00 36.55 5.68
3773 3877 8.504005 ACAAATTTGTGAGAGTATTTCTAACCG 58.496 33.333 22.71 0.00 40.49 4.44
3796 3900 9.938280 GATTGGGCACTATATATACAGTTACAA 57.062 33.333 0.00 0.00 0.00 2.41
3797 3901 9.095700 TGATTGGGCACTATATATACAGTTACA 57.904 33.333 0.00 0.00 0.00 2.41
3798 3902 9.938280 TTGATTGGGCACTATATATACAGTTAC 57.062 33.333 0.00 0.00 0.00 2.50
3800 3904 9.453572 CATTGATTGGGCACTATATATACAGTT 57.546 33.333 0.00 0.00 0.00 3.16
3801 3905 8.825774 TCATTGATTGGGCACTATATATACAGT 58.174 33.333 0.00 0.00 0.00 3.55
3802 3906 9.322773 CTCATTGATTGGGCACTATATATACAG 57.677 37.037 0.00 0.00 0.00 2.74
3803 3907 9.045745 TCTCATTGATTGGGCACTATATATACA 57.954 33.333 0.00 0.00 0.00 2.29
3804 3908 9.890629 TTCTCATTGATTGGGCACTATATATAC 57.109 33.333 0.00 0.00 0.00 1.47
3806 3910 9.624373 GATTCTCATTGATTGGGCACTATATAT 57.376 33.333 0.00 0.00 0.00 0.86
3807 3911 8.605065 TGATTCTCATTGATTGGGCACTATATA 58.395 33.333 0.00 0.00 0.00 0.86
3808 3912 7.464273 TGATTCTCATTGATTGGGCACTATAT 58.536 34.615 0.00 0.00 0.00 0.86
3809 3913 6.840527 TGATTCTCATTGATTGGGCACTATA 58.159 36.000 0.00 0.00 0.00 1.31
3810 3914 5.698104 TGATTCTCATTGATTGGGCACTAT 58.302 37.500 0.00 0.00 0.00 2.12
3811 3915 5.114764 TGATTCTCATTGATTGGGCACTA 57.885 39.130 0.00 0.00 0.00 2.74
3812 3916 3.972133 TGATTCTCATTGATTGGGCACT 58.028 40.909 0.00 0.00 0.00 4.40
3813 3917 4.931661 ATGATTCTCATTGATTGGGCAC 57.068 40.909 0.00 0.00 32.13 5.01
3814 3918 5.943349 AAATGATTCTCATTGATTGGGCA 57.057 34.783 3.29 0.00 45.57 5.36
3815 3919 7.047460 AGTAAATGATTCTCATTGATTGGGC 57.953 36.000 3.29 0.00 45.57 5.36
3816 3920 8.910944 AGAAGTAAATGATTCTCATTGATTGGG 58.089 33.333 3.29 0.00 45.57 4.12
3817 3921 9.731819 CAGAAGTAAATGATTCTCATTGATTGG 57.268 33.333 3.29 0.00 45.57 3.16
3818 3922 9.731819 CCAGAAGTAAATGATTCTCATTGATTG 57.268 33.333 3.29 0.00 45.57 2.67
3819 3923 9.690913 TCCAGAAGTAAATGATTCTCATTGATT 57.309 29.630 3.29 0.18 45.57 2.57
3820 3924 9.690913 TTCCAGAAGTAAATGATTCTCATTGAT 57.309 29.630 3.29 0.00 45.57 2.57
3821 3925 9.519191 TTTCCAGAAGTAAATGATTCTCATTGA 57.481 29.630 3.29 0.00 45.57 2.57
3835 3939 9.581099 GTGAAAAAGTGATTTTTCCAGAAGTAA 57.419 29.630 18.47 1.07 45.48 2.24
3836 3940 8.966868 AGTGAAAAAGTGATTTTTCCAGAAGTA 58.033 29.630 18.47 1.63 45.48 2.24
3837 3941 7.840931 AGTGAAAAAGTGATTTTTCCAGAAGT 58.159 30.769 18.47 5.31 45.48 3.01
3838 3942 8.707938 AAGTGAAAAAGTGATTTTTCCAGAAG 57.292 30.769 18.47 0.00 45.48 2.85
3856 3960 9.494479 CGAGTACTGATAACGTATAAAGTGAAA 57.506 33.333 0.00 0.00 0.00 2.69
3857 3961 7.641411 GCGAGTACTGATAACGTATAAAGTGAA 59.359 37.037 0.00 0.00 0.00 3.18
3858 3962 7.011763 AGCGAGTACTGATAACGTATAAAGTGA 59.988 37.037 0.00 0.00 0.00 3.41
3859 3963 7.130917 AGCGAGTACTGATAACGTATAAAGTG 58.869 38.462 0.00 0.00 0.00 3.16
3860 3964 7.226325 AGAGCGAGTACTGATAACGTATAAAGT 59.774 37.037 0.00 0.00 0.00 2.66
3861 3965 7.531198 CAGAGCGAGTACTGATAACGTATAAAG 59.469 40.741 0.00 0.00 36.38 1.85
3862 3966 7.350467 CAGAGCGAGTACTGATAACGTATAAA 58.650 38.462 0.00 0.00 36.38 1.40
3863 3967 6.565435 GCAGAGCGAGTACTGATAACGTATAA 60.565 42.308 0.00 0.00 36.38 0.98
3864 3968 5.107182 GCAGAGCGAGTACTGATAACGTATA 60.107 44.000 0.00 0.00 36.38 1.47
3865 3969 4.319622 GCAGAGCGAGTACTGATAACGTAT 60.320 45.833 0.00 0.00 36.38 3.06
3866 3970 3.002042 GCAGAGCGAGTACTGATAACGTA 59.998 47.826 0.00 0.00 36.38 3.57
3867 3971 2.223294 GCAGAGCGAGTACTGATAACGT 60.223 50.000 0.00 0.00 36.38 3.99
3868 3972 2.376956 GCAGAGCGAGTACTGATAACG 58.623 52.381 0.00 0.00 36.38 3.18
3869 3973 2.733517 GGCAGAGCGAGTACTGATAAC 58.266 52.381 0.00 0.00 36.38 1.89
3870 3974 1.333931 CGGCAGAGCGAGTACTGATAA 59.666 52.381 0.00 0.00 36.38 1.75
3871 3975 0.945099 CGGCAGAGCGAGTACTGATA 59.055 55.000 0.00 0.00 36.38 2.15
3872 3976 0.748367 TCGGCAGAGCGAGTACTGAT 60.748 55.000 0.00 0.00 36.38 2.90
3873 3977 1.369839 CTCGGCAGAGCGAGTACTGA 61.370 60.000 0.00 0.00 37.73 3.41
3874 3978 1.063327 CTCGGCAGAGCGAGTACTG 59.937 63.158 0.00 0.00 37.73 2.74
3875 3979 1.078356 TCTCGGCAGAGCGAGTACT 60.078 57.895 9.22 0.00 44.02 2.73
3876 3980 1.353804 CTCTCGGCAGAGCGAGTAC 59.646 63.158 9.22 0.00 44.02 2.73
3877 3981 3.814991 CTCTCGGCAGAGCGAGTA 58.185 61.111 9.22 0.00 44.02 2.59
3887 3991 2.407210 CTCTCTGTCGCTCTCGGC 59.593 66.667 0.00 0.00 41.43 5.54
3888 3992 2.407210 GCTCTCTGTCGCTCTCGG 59.593 66.667 0.00 0.00 36.13 4.63
3889 3993 1.723608 ATGGCTCTCTGTCGCTCTCG 61.724 60.000 0.00 0.00 0.00 4.04
3890 3994 0.030638 GATGGCTCTCTGTCGCTCTC 59.969 60.000 0.00 0.00 0.00 3.20
3891 3995 0.682532 TGATGGCTCTCTGTCGCTCT 60.683 55.000 0.00 0.00 0.00 4.09
3892 3996 0.527385 GTGATGGCTCTCTGTCGCTC 60.527 60.000 0.00 0.00 0.00 5.03
3893 3997 1.253593 TGTGATGGCTCTCTGTCGCT 61.254 55.000 0.00 0.00 0.00 4.93
3894 3998 0.805322 CTGTGATGGCTCTCTGTCGC 60.805 60.000 0.00 0.00 0.00 5.19
3895 3999 0.179116 CCTGTGATGGCTCTCTGTCG 60.179 60.000 0.00 0.00 0.00 4.35
3896 4000 1.189752 TCCTGTGATGGCTCTCTGTC 58.810 55.000 0.00 0.00 0.00 3.51
3897 4001 1.649321 TTCCTGTGATGGCTCTCTGT 58.351 50.000 0.00 0.00 0.00 3.41
3898 4002 2.630158 CTTTCCTGTGATGGCTCTCTG 58.370 52.381 0.00 0.00 0.00 3.35
3899 4003 1.558756 CCTTTCCTGTGATGGCTCTCT 59.441 52.381 0.00 0.00 0.00 3.10
3900 4004 1.280421 ACCTTTCCTGTGATGGCTCTC 59.720 52.381 0.00 0.00 0.00 3.20
3901 4005 1.366319 ACCTTTCCTGTGATGGCTCT 58.634 50.000 0.00 0.00 0.00 4.09
3902 4006 3.055094 TCTTACCTTTCCTGTGATGGCTC 60.055 47.826 0.00 0.00 0.00 4.70
3903 4007 2.912956 TCTTACCTTTCCTGTGATGGCT 59.087 45.455 0.00 0.00 0.00 4.75
3904 4008 3.350219 TCTTACCTTTCCTGTGATGGC 57.650 47.619 0.00 0.00 0.00 4.40
3905 4009 4.641989 CCATTCTTACCTTTCCTGTGATGG 59.358 45.833 0.00 0.00 0.00 3.51
3906 4010 4.096984 GCCATTCTTACCTTTCCTGTGATG 59.903 45.833 0.00 0.00 0.00 3.07
3907 4011 4.263905 TGCCATTCTTACCTTTCCTGTGAT 60.264 41.667 0.00 0.00 0.00 3.06
3908 4012 3.073798 TGCCATTCTTACCTTTCCTGTGA 59.926 43.478 0.00 0.00 0.00 3.58
3909 4013 3.420893 TGCCATTCTTACCTTTCCTGTG 58.579 45.455 0.00 0.00 0.00 3.66
3910 4014 3.690460 CTGCCATTCTTACCTTTCCTGT 58.310 45.455 0.00 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.