Multiple sequence alignment - TraesCS4A01G107800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G107800 chr4A 100.000 2924 0 0 1 2924 125039204 125036281 0.000000e+00 5400.0
1 TraesCS4A01G107800 chr4A 90.518 2299 120 46 682 2921 621705814 621708073 0.000000e+00 2948.0
2 TraesCS4A01G107800 chr4A 96.875 64 2 0 681 744 125031144 125031081 1.110000e-19 108.0
3 TraesCS4A01G107800 chr1A 94.852 2292 68 6 681 2924 561407392 561405103 0.000000e+00 3533.0
4 TraesCS4A01G107800 chr1A 94.512 2296 70 8 679 2924 327713819 327711530 0.000000e+00 3491.0
5 TraesCS4A01G107800 chr1A 90.000 280 8 3 681 941 327706385 327706107 7.760000e-91 344.0
6 TraesCS4A01G107800 chr1A 89.510 286 10 3 681 947 561391728 561391444 7.760000e-91 344.0
7 TraesCS4A01G107800 chr7A 93.430 2283 103 19 681 2922 17110603 17112879 0.000000e+00 3341.0
8 TraesCS4A01G107800 chr7A 90.000 110 11 0 462 571 596660546 596660655 3.040000e-30 143.0
9 TraesCS4A01G107800 chr2A 93.435 2285 98 17 679 2924 12904850 12902579 0.000000e+00 3341.0
10 TraesCS4A01G107800 chr2A 92.004 2001 108 21 961 2924 677222422 677220437 0.000000e+00 2761.0
11 TraesCS4A01G107800 chr2A 96.716 1492 30 3 1448 2922 70125576 70124087 0.000000e+00 2466.0
12 TraesCS4A01G107800 chr2A 95.575 791 16 2 681 1452 70134931 70134141 0.000000e+00 1249.0
13 TraesCS4A01G107800 chr2A 91.844 282 4 3 681 943 70118941 70118660 2.750000e-100 375.0
14 TraesCS4A01G107800 chr7B 92.944 2296 104 18 681 2924 648721063 648718774 0.000000e+00 3290.0
15 TraesCS4A01G107800 chr7B 89.381 113 12 0 462 574 91214056 91213944 3.040000e-30 143.0
16 TraesCS4A01G107800 chr7B 90.000 110 11 0 462 571 123945242 123945351 3.040000e-30 143.0
17 TraesCS4A01G107800 chr5A 92.863 2298 106 18 679 2924 649442264 649444555 0.000000e+00 3282.0
18 TraesCS4A01G107800 chr5A 93.750 48 1 2 399 445 3296070 3296116 1.450000e-08 71.3
19 TraesCS4A01G107800 chr5A 91.667 48 2 2 399 445 3295495 3295541 6.760000e-07 65.8
20 TraesCS4A01G107800 chr3D 93.992 1032 40 8 1912 2924 35718570 35719598 0.000000e+00 1543.0
21 TraesCS4A01G107800 chr3D 88.476 269 11 3 681 930 35724746 35725013 1.020000e-79 307.0
22 TraesCS4A01G107800 chr4B 92.428 449 24 5 1 447 423774018 423774458 1.480000e-177 632.0
23 TraesCS4A01G107800 chr4B 88.136 118 13 1 458 574 601384391 601384274 3.930000e-29 139.0
24 TraesCS4A01G107800 chr4D 91.546 414 18 3 1 413 341693972 341694369 3.290000e-154 555.0
25 TraesCS4A01G107800 chr7D 87.425 334 21 6 681 994 168818006 168817674 5.960000e-97 364.0
26 TraesCS4A01G107800 chr1D 90.909 110 10 0 462 571 121624482 121624591 6.530000e-32 148.0
27 TraesCS4A01G107800 chr1D 89.381 113 11 1 462 574 464737140 464737029 1.090000e-29 141.0
28 TraesCS4A01G107800 chr1B 90.265 113 11 0 462 574 637344827 637344715 6.530000e-32 148.0
29 TraesCS4A01G107800 chrUn 89.381 113 12 0 462 574 457867535 457867423 3.040000e-30 143.0
30 TraesCS4A01G107800 chr3B 90.000 110 11 0 462 571 507505575 507505684 3.040000e-30 143.0
31 TraesCS4A01G107800 chr5B 97.368 38 1 0 406 443 455296286 455296249 6.760000e-07 65.8
32 TraesCS4A01G107800 chr2D 100.000 29 0 0 417 445 27824861 27824833 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G107800 chr4A 125036281 125039204 2923 True 5400 5400 100.000 1 2924 1 chr4A.!!$R2 2923
1 TraesCS4A01G107800 chr4A 621705814 621708073 2259 False 2948 2948 90.518 682 2921 1 chr4A.!!$F1 2239
2 TraesCS4A01G107800 chr1A 561405103 561407392 2289 True 3533 3533 94.852 681 2924 1 chr1A.!!$R4 2243
3 TraesCS4A01G107800 chr1A 327711530 327713819 2289 True 3491 3491 94.512 679 2924 1 chr1A.!!$R2 2245
4 TraesCS4A01G107800 chr7A 17110603 17112879 2276 False 3341 3341 93.430 681 2922 1 chr7A.!!$F1 2241
5 TraesCS4A01G107800 chr2A 12902579 12904850 2271 True 3341 3341 93.435 679 2924 1 chr2A.!!$R1 2245
6 TraesCS4A01G107800 chr2A 677220437 677222422 1985 True 2761 2761 92.004 961 2924 1 chr2A.!!$R5 1963
7 TraesCS4A01G107800 chr2A 70124087 70125576 1489 True 2466 2466 96.716 1448 2922 1 chr2A.!!$R3 1474
8 TraesCS4A01G107800 chr2A 70134141 70134931 790 True 1249 1249 95.575 681 1452 1 chr2A.!!$R4 771
9 TraesCS4A01G107800 chr7B 648718774 648721063 2289 True 3290 3290 92.944 681 2924 1 chr7B.!!$R2 2243
10 TraesCS4A01G107800 chr5A 649442264 649444555 2291 False 3282 3282 92.863 679 2924 1 chr5A.!!$F1 2245
11 TraesCS4A01G107800 chr3D 35718570 35719598 1028 False 1543 1543 93.992 1912 2924 1 chr3D.!!$F1 1012

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
251 252 0.028110 CGAAAAGCTATTCTGCGGGC 59.972 55.0 0.0 0.0 38.13 6.13 F
266 267 0.243636 CGGGCTTGGGCTTAACTTTG 59.756 55.0 0.0 0.0 38.73 2.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1803 1882 1.228552 ACGAAGGGCTGCATGGTTT 60.229 52.632 0.50 0.00 0.00 3.27 R
2282 2390 6.233430 TGTACACGTAGTCTGAGACTTTAC 57.767 41.667 21.49 12.64 40.28 2.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.014604 GCTATAGGTGTTCGTAGCAGG 57.985 52.381 1.04 0.00 39.39 4.85
21 22 2.862921 GCTATAGGTGTTCGTAGCAGGC 60.863 54.545 1.04 0.00 39.39 4.85
22 23 1.191535 ATAGGTGTTCGTAGCAGGCA 58.808 50.000 0.00 0.00 0.00 4.75
23 24 0.245539 TAGGTGTTCGTAGCAGGCAC 59.754 55.000 0.00 0.00 0.00 5.01
24 25 1.301401 GGTGTTCGTAGCAGGCACA 60.301 57.895 0.00 0.00 0.00 4.57
25 26 0.673644 GGTGTTCGTAGCAGGCACAT 60.674 55.000 0.00 0.00 0.00 3.21
26 27 0.443869 GTGTTCGTAGCAGGCACATG 59.556 55.000 0.00 0.00 0.00 3.21
27 28 1.298157 TGTTCGTAGCAGGCACATGC 61.298 55.000 0.00 0.00 46.88 4.06
39 40 2.675767 GCACATGCCAATAGACGATG 57.324 50.000 0.00 0.00 34.31 3.84
40 41 2.212652 GCACATGCCAATAGACGATGA 58.787 47.619 0.00 0.00 34.31 2.92
41 42 2.810274 GCACATGCCAATAGACGATGAT 59.190 45.455 0.00 0.00 34.31 2.45
42 43 3.996363 GCACATGCCAATAGACGATGATA 59.004 43.478 0.00 0.00 34.31 2.15
43 44 4.143030 GCACATGCCAATAGACGATGATAC 60.143 45.833 0.00 0.00 34.31 2.24
44 45 5.233225 CACATGCCAATAGACGATGATACT 58.767 41.667 0.00 0.00 0.00 2.12
45 46 5.347093 CACATGCCAATAGACGATGATACTC 59.653 44.000 0.00 0.00 0.00 2.59
46 47 4.521130 TGCCAATAGACGATGATACTCC 57.479 45.455 0.00 0.00 0.00 3.85
47 48 3.057526 TGCCAATAGACGATGATACTCCG 60.058 47.826 0.00 0.00 0.00 4.63
48 49 3.673594 GCCAATAGACGATGATACTCCGG 60.674 52.174 0.00 0.00 0.00 5.14
49 50 3.506455 CCAATAGACGATGATACTCCGGT 59.494 47.826 0.00 0.00 0.00 5.28
50 51 4.379603 CCAATAGACGATGATACTCCGGTC 60.380 50.000 0.00 0.00 0.00 4.79
51 52 2.343484 AGACGATGATACTCCGGTCA 57.657 50.000 0.00 0.00 0.00 4.02
52 53 2.651455 AGACGATGATACTCCGGTCAA 58.349 47.619 0.00 0.00 0.00 3.18
53 54 2.619177 AGACGATGATACTCCGGTCAAG 59.381 50.000 0.00 0.00 0.00 3.02
54 55 1.067212 ACGATGATACTCCGGTCAAGC 59.933 52.381 0.00 0.00 0.00 4.01
55 56 1.067060 CGATGATACTCCGGTCAAGCA 59.933 52.381 0.00 0.00 0.00 3.91
56 57 2.481276 CGATGATACTCCGGTCAAGCAA 60.481 50.000 0.00 0.00 0.00 3.91
57 58 2.380084 TGATACTCCGGTCAAGCAAC 57.620 50.000 0.00 0.00 0.00 4.17
58 59 1.899814 TGATACTCCGGTCAAGCAACT 59.100 47.619 0.00 0.00 0.00 3.16
59 60 2.301870 TGATACTCCGGTCAAGCAACTT 59.698 45.455 0.00 0.00 0.00 2.66
60 61 2.922740 TACTCCGGTCAAGCAACTTT 57.077 45.000 0.00 0.00 0.00 2.66
61 62 1.308998 ACTCCGGTCAAGCAACTTTG 58.691 50.000 0.00 0.00 0.00 2.77
62 63 0.593128 CTCCGGTCAAGCAACTTTGG 59.407 55.000 0.00 0.00 0.00 3.28
63 64 0.181587 TCCGGTCAAGCAACTTTGGA 59.818 50.000 0.00 0.00 0.00 3.53
64 65 1.028905 CCGGTCAAGCAACTTTGGAA 58.971 50.000 0.00 0.00 0.00 3.53
65 66 1.613437 CCGGTCAAGCAACTTTGGAAT 59.387 47.619 0.00 0.00 0.00 3.01
66 67 2.607771 CCGGTCAAGCAACTTTGGAATG 60.608 50.000 0.00 0.00 0.00 2.67
67 68 2.407090 GGTCAAGCAACTTTGGAATGC 58.593 47.619 0.00 0.00 40.34 3.56
72 73 1.808945 AGCAACTTTGGAATGCTCTCG 59.191 47.619 0.00 0.00 46.98 4.04
73 74 1.806542 GCAACTTTGGAATGCTCTCGA 59.193 47.619 0.00 0.00 37.12 4.04
74 75 2.413371 GCAACTTTGGAATGCTCTCGAC 60.413 50.000 0.00 0.00 37.12 4.20
75 76 2.100605 ACTTTGGAATGCTCTCGACC 57.899 50.000 0.00 0.00 0.00 4.79
76 77 1.625818 ACTTTGGAATGCTCTCGACCT 59.374 47.619 0.00 0.00 0.00 3.85
77 78 2.005451 CTTTGGAATGCTCTCGACCTG 58.995 52.381 0.00 0.00 0.00 4.00
78 79 0.976641 TTGGAATGCTCTCGACCTGT 59.023 50.000 0.00 0.00 0.00 4.00
79 80 0.976641 TGGAATGCTCTCGACCTGTT 59.023 50.000 0.00 0.00 0.00 3.16
80 81 1.347707 TGGAATGCTCTCGACCTGTTT 59.652 47.619 0.00 0.00 0.00 2.83
81 82 2.565391 TGGAATGCTCTCGACCTGTTTA 59.435 45.455 0.00 0.00 0.00 2.01
82 83 3.007506 TGGAATGCTCTCGACCTGTTTAA 59.992 43.478 0.00 0.00 0.00 1.52
83 84 4.000988 GGAATGCTCTCGACCTGTTTAAA 58.999 43.478 0.00 0.00 0.00 1.52
84 85 4.636206 GGAATGCTCTCGACCTGTTTAAAT 59.364 41.667 0.00 0.00 0.00 1.40
85 86 5.123979 GGAATGCTCTCGACCTGTTTAAATT 59.876 40.000 0.00 0.00 0.00 1.82
86 87 6.349363 GGAATGCTCTCGACCTGTTTAAATTT 60.349 38.462 0.00 0.00 0.00 1.82
87 88 6.575162 ATGCTCTCGACCTGTTTAAATTTT 57.425 33.333 0.00 0.00 0.00 1.82
88 89 6.385649 TGCTCTCGACCTGTTTAAATTTTT 57.614 33.333 0.00 0.00 0.00 1.94
89 90 6.435428 TGCTCTCGACCTGTTTAAATTTTTC 58.565 36.000 0.00 0.00 0.00 2.29
90 91 5.564127 GCTCTCGACCTGTTTAAATTTTTCG 59.436 40.000 0.00 0.00 0.00 3.46
91 92 6.565247 GCTCTCGACCTGTTTAAATTTTTCGA 60.565 38.462 0.00 11.82 33.52 3.71
92 93 6.652245 TCTCGACCTGTTTAAATTTTTCGAC 58.348 36.000 0.00 0.00 31.44 4.20
93 94 5.750650 TCGACCTGTTTAAATTTTTCGACC 58.249 37.500 0.00 0.00 29.78 4.79
94 95 5.296283 TCGACCTGTTTAAATTTTTCGACCA 59.704 36.000 0.00 0.00 29.78 4.02
95 96 5.972382 CGACCTGTTTAAATTTTTCGACCAA 59.028 36.000 0.00 0.00 0.00 3.67
96 97 6.141685 CGACCTGTTTAAATTTTTCGACCAAG 59.858 38.462 0.00 0.00 0.00 3.61
97 98 6.869695 ACCTGTTTAAATTTTTCGACCAAGT 58.130 32.000 0.00 0.00 0.00 3.16
98 99 7.324935 ACCTGTTTAAATTTTTCGACCAAGTT 58.675 30.769 0.00 0.00 0.00 2.66
99 100 7.276878 ACCTGTTTAAATTTTTCGACCAAGTTG 59.723 33.333 0.00 0.00 0.00 3.16
100 101 7.254286 CCTGTTTAAATTTTTCGACCAAGTTGG 60.254 37.037 20.76 20.76 45.02 3.77
101 102 6.036191 TGTTTAAATTTTTCGACCAAGTTGGC 59.964 34.615 22.25 13.30 42.67 4.52
102 103 4.400529 AAATTTTTCGACCAAGTTGGCT 57.599 36.364 22.25 9.18 42.67 4.75
103 104 4.400529 AATTTTTCGACCAAGTTGGCTT 57.599 36.364 22.25 2.86 42.67 4.35
116 117 2.820037 GGCTTGTACTGCCGCCTC 60.820 66.667 13.14 0.00 41.03 4.70
117 118 2.820037 GCTTGTACTGCCGCCTCC 60.820 66.667 0.00 0.00 0.00 4.30
118 119 2.982130 CTTGTACTGCCGCCTCCT 59.018 61.111 0.00 0.00 0.00 3.69
119 120 1.448540 CTTGTACTGCCGCCTCCTG 60.449 63.158 0.00 0.00 0.00 3.86
120 121 2.859273 CTTGTACTGCCGCCTCCTGG 62.859 65.000 0.00 0.00 0.00 4.45
131 132 4.711949 CTCCTGGCGCTTGTGGCT 62.712 66.667 7.64 0.00 39.13 4.75
132 133 3.315142 CTCCTGGCGCTTGTGGCTA 62.315 63.158 7.64 0.00 39.13 3.93
133 134 2.359850 CCTGGCGCTTGTGGCTAA 60.360 61.111 7.64 0.00 39.13 3.09
134 135 2.690778 CCTGGCGCTTGTGGCTAAC 61.691 63.158 7.64 0.00 39.13 2.34
135 136 1.672356 CTGGCGCTTGTGGCTAACT 60.672 57.895 7.64 0.00 39.13 2.24
136 137 1.228124 TGGCGCTTGTGGCTAACTT 60.228 52.632 7.64 0.00 39.13 2.66
137 138 0.035598 TGGCGCTTGTGGCTAACTTA 59.964 50.000 7.64 0.00 39.13 2.24
138 139 0.727398 GGCGCTTGTGGCTAACTTAG 59.273 55.000 7.64 0.00 39.13 2.18
139 140 1.674817 GGCGCTTGTGGCTAACTTAGA 60.675 52.381 7.64 0.00 39.13 2.10
140 141 2.073816 GCGCTTGTGGCTAACTTAGAA 58.926 47.619 0.00 0.00 39.13 2.10
141 142 2.678336 GCGCTTGTGGCTAACTTAGAAT 59.322 45.455 0.00 0.00 39.13 2.40
142 143 3.485877 GCGCTTGTGGCTAACTTAGAATG 60.486 47.826 0.00 0.00 39.13 2.67
143 144 3.063997 CGCTTGTGGCTAACTTAGAATGG 59.936 47.826 0.00 0.00 39.13 3.16
144 145 4.010349 GCTTGTGGCTAACTTAGAATGGT 58.990 43.478 0.00 0.00 38.06 3.55
145 146 5.183228 GCTTGTGGCTAACTTAGAATGGTA 58.817 41.667 0.00 0.00 38.06 3.25
146 147 5.064834 GCTTGTGGCTAACTTAGAATGGTAC 59.935 44.000 0.00 0.00 38.06 3.34
147 148 6.368779 TTGTGGCTAACTTAGAATGGTACT 57.631 37.500 0.00 0.00 0.00 2.73
148 149 7.484993 TTGTGGCTAACTTAGAATGGTACTA 57.515 36.000 0.00 0.00 0.00 1.82
149 150 6.870769 TGTGGCTAACTTAGAATGGTACTAC 58.129 40.000 0.00 0.00 0.00 2.73
150 151 5.975939 GTGGCTAACTTAGAATGGTACTACG 59.024 44.000 0.00 0.00 0.00 3.51
151 152 5.653769 TGGCTAACTTAGAATGGTACTACGT 59.346 40.000 0.00 0.00 0.00 3.57
152 153 6.183360 TGGCTAACTTAGAATGGTACTACGTC 60.183 42.308 0.00 0.00 0.00 4.34
153 154 6.183360 GGCTAACTTAGAATGGTACTACGTCA 60.183 42.308 0.00 0.00 0.00 4.35
154 155 6.911511 GCTAACTTAGAATGGTACTACGTCAG 59.088 42.308 0.00 0.00 0.00 3.51
155 156 7.201679 GCTAACTTAGAATGGTACTACGTCAGA 60.202 40.741 0.00 0.00 0.00 3.27
156 157 7.642082 AACTTAGAATGGTACTACGTCAGAT 57.358 36.000 0.00 0.00 0.00 2.90
157 158 7.028926 ACTTAGAATGGTACTACGTCAGATG 57.971 40.000 0.00 0.00 0.00 2.90
158 159 4.308899 AGAATGGTACTACGTCAGATGC 57.691 45.455 0.00 0.00 0.00 3.91
159 160 3.699538 AGAATGGTACTACGTCAGATGCA 59.300 43.478 0.00 0.00 0.00 3.96
160 161 4.159693 AGAATGGTACTACGTCAGATGCAA 59.840 41.667 0.00 0.00 0.00 4.08
161 162 3.503827 TGGTACTACGTCAGATGCAAG 57.496 47.619 0.00 0.00 0.00 4.01
162 163 3.086282 TGGTACTACGTCAGATGCAAGA 58.914 45.455 0.00 0.00 0.00 3.02
163 164 3.508402 TGGTACTACGTCAGATGCAAGAA 59.492 43.478 0.00 0.00 0.00 2.52
164 165 4.106197 GGTACTACGTCAGATGCAAGAAG 58.894 47.826 0.00 0.00 0.00 2.85
165 166 4.142447 GGTACTACGTCAGATGCAAGAAGA 60.142 45.833 0.00 0.00 0.00 2.87
166 167 4.521130 ACTACGTCAGATGCAAGAAGAA 57.479 40.909 0.00 0.00 0.00 2.52
167 168 4.883083 ACTACGTCAGATGCAAGAAGAAA 58.117 39.130 0.00 0.00 0.00 2.52
168 169 5.297547 ACTACGTCAGATGCAAGAAGAAAA 58.702 37.500 0.00 0.00 0.00 2.29
169 170 4.474226 ACGTCAGATGCAAGAAGAAAAC 57.526 40.909 0.00 0.00 0.00 2.43
170 171 4.130118 ACGTCAGATGCAAGAAGAAAACT 58.870 39.130 0.00 0.00 0.00 2.66
171 172 4.576463 ACGTCAGATGCAAGAAGAAAACTT 59.424 37.500 0.00 0.00 0.00 2.66
172 173 5.066505 ACGTCAGATGCAAGAAGAAAACTTT 59.933 36.000 0.00 0.00 0.00 2.66
173 174 5.973565 CGTCAGATGCAAGAAGAAAACTTTT 59.026 36.000 0.00 0.00 0.00 2.27
174 175 6.473455 CGTCAGATGCAAGAAGAAAACTTTTT 59.527 34.615 0.00 0.00 0.00 1.94
211 212 7.886338 ACCTTTTCAATTCAGTTAGATGAACC 58.114 34.615 0.00 0.00 41.76 3.62
212 213 7.725844 ACCTTTTCAATTCAGTTAGATGAACCT 59.274 33.333 0.00 0.00 41.76 3.50
213 214 8.025445 CCTTTTCAATTCAGTTAGATGAACCTG 58.975 37.037 0.00 0.00 41.76 4.00
214 215 6.500684 TTCAATTCAGTTAGATGAACCTGC 57.499 37.500 0.00 0.00 41.76 4.85
215 216 5.809001 TCAATTCAGTTAGATGAACCTGCT 58.191 37.500 0.00 0.00 41.76 4.24
216 217 5.877012 TCAATTCAGTTAGATGAACCTGCTC 59.123 40.000 0.00 0.00 41.76 4.26
217 218 3.510388 TCAGTTAGATGAACCTGCTCG 57.490 47.619 0.00 0.00 39.02 5.03
218 219 2.166459 TCAGTTAGATGAACCTGCTCGG 59.834 50.000 0.00 0.00 39.02 4.63
232 233 1.969103 GCTCGGTGCAGACAATTTTC 58.031 50.000 0.00 0.00 42.31 2.29
233 234 1.725931 GCTCGGTGCAGACAATTTTCG 60.726 52.381 0.00 0.00 42.31 3.46
234 235 1.798223 CTCGGTGCAGACAATTTTCGA 59.202 47.619 0.00 0.00 0.00 3.71
235 236 2.214347 TCGGTGCAGACAATTTTCGAA 58.786 42.857 0.00 0.00 0.00 3.71
236 237 2.614520 TCGGTGCAGACAATTTTCGAAA 59.385 40.909 6.47 6.47 0.00 3.46
237 238 3.065510 TCGGTGCAGACAATTTTCGAAAA 59.934 39.130 24.43 24.43 0.00 2.29
238 239 3.421888 CGGTGCAGACAATTTTCGAAAAG 59.578 43.478 25.87 16.73 0.00 2.27
239 240 3.182372 GGTGCAGACAATTTTCGAAAAGC 59.818 43.478 25.87 21.66 0.00 3.51
240 241 4.044426 GTGCAGACAATTTTCGAAAAGCT 58.956 39.130 25.87 17.31 0.00 3.74
241 242 5.212194 GTGCAGACAATTTTCGAAAAGCTA 58.788 37.500 25.87 5.98 0.00 3.32
242 243 5.858581 GTGCAGACAATTTTCGAAAAGCTAT 59.141 36.000 25.87 12.95 0.00 2.97
243 244 6.363357 GTGCAGACAATTTTCGAAAAGCTATT 59.637 34.615 25.87 14.05 0.00 1.73
244 245 6.582295 TGCAGACAATTTTCGAAAAGCTATTC 59.418 34.615 25.87 17.01 0.00 1.75
245 246 6.803807 GCAGACAATTTTCGAAAAGCTATTCT 59.196 34.615 25.87 18.58 0.00 2.40
246 247 7.201299 GCAGACAATTTTCGAAAAGCTATTCTG 60.201 37.037 25.87 26.30 0.00 3.02
247 248 6.803807 AGACAATTTTCGAAAAGCTATTCTGC 59.196 34.615 25.87 9.98 0.00 4.26
248 249 5.569059 ACAATTTTCGAAAAGCTATTCTGCG 59.431 36.000 25.87 8.32 38.13 5.18
249 250 3.740044 TTTCGAAAAGCTATTCTGCGG 57.260 42.857 8.44 0.00 38.13 5.69
250 251 1.651987 TCGAAAAGCTATTCTGCGGG 58.348 50.000 0.00 0.00 38.13 6.13
251 252 0.028110 CGAAAAGCTATTCTGCGGGC 59.972 55.000 0.00 0.00 38.13 6.13
252 253 1.383523 GAAAAGCTATTCTGCGGGCT 58.616 50.000 0.00 0.00 38.13 5.19
253 254 1.745653 GAAAAGCTATTCTGCGGGCTT 59.254 47.619 1.36 1.36 45.31 4.35
254 255 1.098050 AAAGCTATTCTGCGGGCTTG 58.902 50.000 7.42 0.00 43.05 4.01
255 256 0.749454 AAGCTATTCTGCGGGCTTGG 60.749 55.000 6.02 0.00 42.40 3.61
256 257 2.189499 GCTATTCTGCGGGCTTGGG 61.189 63.158 0.00 0.00 0.00 4.12
257 258 2.124320 TATTCTGCGGGCTTGGGC 60.124 61.111 0.00 0.00 37.82 5.36
258 259 2.615227 CTATTCTGCGGGCTTGGGCT 62.615 60.000 0.00 0.00 38.73 5.19
259 260 2.210144 TATTCTGCGGGCTTGGGCTT 62.210 55.000 0.00 0.00 38.73 4.35
260 261 2.210144 ATTCTGCGGGCTTGGGCTTA 62.210 55.000 0.00 0.00 38.73 3.09
261 262 2.361104 CTGCGGGCTTGGGCTTAA 60.361 61.111 0.00 0.00 38.73 1.85
262 263 2.675075 TGCGGGCTTGGGCTTAAC 60.675 61.111 0.00 0.00 38.73 2.01
263 264 2.361230 GCGGGCTTGGGCTTAACT 60.361 61.111 0.00 0.00 38.73 2.24
264 265 1.977009 GCGGGCTTGGGCTTAACTT 60.977 57.895 0.00 0.00 38.73 2.66
265 266 1.532604 GCGGGCTTGGGCTTAACTTT 61.533 55.000 0.00 0.00 38.73 2.66
266 267 0.243636 CGGGCTTGGGCTTAACTTTG 59.756 55.000 0.00 0.00 38.73 2.77
267 268 1.627864 GGGCTTGGGCTTAACTTTGA 58.372 50.000 0.00 0.00 38.73 2.69
268 269 2.179427 GGGCTTGGGCTTAACTTTGAT 58.821 47.619 0.00 0.00 38.73 2.57
269 270 2.094026 GGGCTTGGGCTTAACTTTGATG 60.094 50.000 0.00 0.00 38.73 3.07
270 271 2.562738 GGCTTGGGCTTAACTTTGATGT 59.437 45.455 0.00 0.00 38.73 3.06
271 272 3.761752 GGCTTGGGCTTAACTTTGATGTA 59.238 43.478 0.00 0.00 38.73 2.29
272 273 4.402474 GGCTTGGGCTTAACTTTGATGTAT 59.598 41.667 0.00 0.00 38.73 2.29
273 274 5.592688 GGCTTGGGCTTAACTTTGATGTATA 59.407 40.000 0.00 0.00 38.73 1.47
274 275 6.459710 GGCTTGGGCTTAACTTTGATGTATAC 60.460 42.308 0.00 0.00 38.73 1.47
275 276 6.094881 GCTTGGGCTTAACTTTGATGTATACA 59.905 38.462 8.27 8.27 35.22 2.29
276 277 7.362574 GCTTGGGCTTAACTTTGATGTATACAA 60.363 37.037 10.14 0.00 35.22 2.41
277 278 7.624360 TGGGCTTAACTTTGATGTATACAAG 57.376 36.000 10.14 5.21 0.00 3.16
278 279 7.398829 TGGGCTTAACTTTGATGTATACAAGA 58.601 34.615 10.14 0.00 0.00 3.02
279 280 8.052748 TGGGCTTAACTTTGATGTATACAAGAT 58.947 33.333 10.14 0.15 0.00 2.40
280 281 9.555727 GGGCTTAACTTTGATGTATACAAGATA 57.444 33.333 10.14 0.00 0.00 1.98
286 287 9.905713 AACTTTGATGTATACAAGATACACCAT 57.094 29.630 10.14 0.00 37.33 3.55
287 288 9.330063 ACTTTGATGTATACAAGATACACCATG 57.670 33.333 10.14 0.00 37.33 3.66
288 289 9.330063 CTTTGATGTATACAAGATACACCATGT 57.670 33.333 10.14 0.00 37.33 3.21
289 290 8.887036 TTGATGTATACAAGATACACCATGTC 57.113 34.615 10.14 0.00 37.33 3.06
290 291 8.250143 TGATGTATACAAGATACACCATGTCT 57.750 34.615 10.14 0.00 37.33 3.41
291 292 9.362151 TGATGTATACAAGATACACCATGTCTA 57.638 33.333 10.14 0.00 37.33 2.59
297 298 7.187824 ACAAGATACACCATGTCTATTCAGT 57.812 36.000 0.00 0.00 0.00 3.41
298 299 7.044181 ACAAGATACACCATGTCTATTCAGTG 58.956 38.462 0.00 0.00 0.00 3.66
299 300 7.093333 ACAAGATACACCATGTCTATTCAGTGA 60.093 37.037 0.00 0.00 0.00 3.41
300 301 6.810911 AGATACACCATGTCTATTCAGTGAC 58.189 40.000 0.00 0.00 0.00 3.67
301 302 4.207891 ACACCATGTCTATTCAGTGACC 57.792 45.455 0.00 0.00 32.67 4.02
302 303 3.840666 ACACCATGTCTATTCAGTGACCT 59.159 43.478 0.00 0.00 32.67 3.85
303 304 5.023452 ACACCATGTCTATTCAGTGACCTA 58.977 41.667 0.00 0.00 32.67 3.08
304 305 5.483937 ACACCATGTCTATTCAGTGACCTAA 59.516 40.000 0.00 0.00 32.67 2.69
305 306 6.013725 ACACCATGTCTATTCAGTGACCTAAA 60.014 38.462 0.00 0.00 32.67 1.85
306 307 6.536582 CACCATGTCTATTCAGTGACCTAAAG 59.463 42.308 0.00 0.00 32.67 1.85
307 308 6.440647 ACCATGTCTATTCAGTGACCTAAAGA 59.559 38.462 0.00 0.00 32.67 2.52
308 309 6.758886 CCATGTCTATTCAGTGACCTAAAGAC 59.241 42.308 0.00 2.78 34.18 3.01
309 310 6.911250 TGTCTATTCAGTGACCTAAAGACA 57.089 37.500 13.85 13.85 39.65 3.41
310 311 7.297936 TGTCTATTCAGTGACCTAAAGACAA 57.702 36.000 14.83 4.81 39.17 3.18
311 312 7.732025 TGTCTATTCAGTGACCTAAAGACAAA 58.268 34.615 14.83 0.63 39.17 2.83
312 313 7.872993 TGTCTATTCAGTGACCTAAAGACAAAG 59.127 37.037 14.83 0.00 39.17 2.77
313 314 8.088981 GTCTATTCAGTGACCTAAAGACAAAGA 58.911 37.037 0.00 0.00 33.86 2.52
314 315 8.088981 TCTATTCAGTGACCTAAAGACAAAGAC 58.911 37.037 0.00 0.00 0.00 3.01
315 316 5.871396 TCAGTGACCTAAAGACAAAGACT 57.129 39.130 0.00 0.00 0.00 3.24
316 317 6.971726 TCAGTGACCTAAAGACAAAGACTA 57.028 37.500 0.00 0.00 0.00 2.59
317 318 6.982852 TCAGTGACCTAAAGACAAAGACTAG 58.017 40.000 0.00 0.00 0.00 2.57
318 319 6.776116 TCAGTGACCTAAAGACAAAGACTAGA 59.224 38.462 0.00 0.00 0.00 2.43
319 320 7.287005 TCAGTGACCTAAAGACAAAGACTAGAA 59.713 37.037 0.00 0.00 0.00 2.10
320 321 7.926555 CAGTGACCTAAAGACAAAGACTAGAAA 59.073 37.037 0.00 0.00 0.00 2.52
321 322 8.652290 AGTGACCTAAAGACAAAGACTAGAAAT 58.348 33.333 0.00 0.00 0.00 2.17
322 323 9.274206 GTGACCTAAAGACAAAGACTAGAAATT 57.726 33.333 0.00 0.00 0.00 1.82
323 324 9.847224 TGACCTAAAGACAAAGACTAGAAATTT 57.153 29.630 0.00 0.00 0.00 1.82
325 326 9.847224 ACCTAAAGACAAAGACTAGAAATTTCA 57.153 29.630 19.99 5.68 0.00 2.69
328 329 6.787085 AGACAAAGACTAGAAATTTCACCG 57.213 37.500 19.99 9.81 0.00 4.94
329 330 5.701290 AGACAAAGACTAGAAATTTCACCGG 59.299 40.000 19.99 0.00 0.00 5.28
330 331 5.617252 ACAAAGACTAGAAATTTCACCGGA 58.383 37.500 19.99 0.00 0.00 5.14
331 332 5.469084 ACAAAGACTAGAAATTTCACCGGAC 59.531 40.000 19.99 6.51 0.00 4.79
332 333 5.485209 AAGACTAGAAATTTCACCGGACT 57.515 39.130 19.99 8.44 0.00 3.85
333 334 6.600882 AAGACTAGAAATTTCACCGGACTA 57.399 37.500 19.99 1.46 0.00 2.59
334 335 6.600882 AGACTAGAAATTTCACCGGACTAA 57.399 37.500 19.99 0.00 0.00 2.24
335 336 6.631962 AGACTAGAAATTTCACCGGACTAAG 58.368 40.000 19.99 5.73 0.00 2.18
336 337 5.176592 ACTAGAAATTTCACCGGACTAAGC 58.823 41.667 19.99 0.00 0.00 3.09
337 338 4.015872 AGAAATTTCACCGGACTAAGCA 57.984 40.909 19.99 0.00 0.00 3.91
338 339 4.394729 AGAAATTTCACCGGACTAAGCAA 58.605 39.130 19.99 0.00 0.00 3.91
339 340 4.825085 AGAAATTTCACCGGACTAAGCAAA 59.175 37.500 19.99 0.00 0.00 3.68
340 341 5.300792 AGAAATTTCACCGGACTAAGCAAAA 59.699 36.000 19.99 0.00 0.00 2.44
341 342 3.974871 TTTCACCGGACTAAGCAAAAC 57.025 42.857 9.46 0.00 0.00 2.43
342 343 2.623878 TCACCGGACTAAGCAAAACA 57.376 45.000 9.46 0.00 0.00 2.83
343 344 2.489971 TCACCGGACTAAGCAAAACAG 58.510 47.619 9.46 0.00 0.00 3.16
344 345 2.103432 TCACCGGACTAAGCAAAACAGA 59.897 45.455 9.46 0.00 0.00 3.41
345 346 2.875933 CACCGGACTAAGCAAAACAGAA 59.124 45.455 9.46 0.00 0.00 3.02
346 347 3.314080 CACCGGACTAAGCAAAACAGAAA 59.686 43.478 9.46 0.00 0.00 2.52
347 348 3.949113 ACCGGACTAAGCAAAACAGAAAA 59.051 39.130 9.46 0.00 0.00 2.29
348 349 4.399934 ACCGGACTAAGCAAAACAGAAAAA 59.600 37.500 9.46 0.00 0.00 1.94
371 372 8.664211 AAAAATGTTTAACCCGAATTGCTAAA 57.336 26.923 0.00 0.00 0.00 1.85
372 373 7.646446 AAATGTTTAACCCGAATTGCTAAAC 57.354 32.000 0.00 0.00 34.51 2.01
373 374 6.584185 ATGTTTAACCCGAATTGCTAAACT 57.416 33.333 0.00 0.00 34.84 2.66
374 375 6.004408 TGTTTAACCCGAATTGCTAAACTC 57.996 37.500 0.00 0.00 34.84 3.01
375 376 4.932268 TTAACCCGAATTGCTAAACTCG 57.068 40.909 0.00 0.00 0.00 4.18
376 377 2.754946 ACCCGAATTGCTAAACTCGA 57.245 45.000 0.00 0.00 33.13 4.04
377 378 2.344025 ACCCGAATTGCTAAACTCGAC 58.656 47.619 0.00 0.00 33.13 4.20
378 379 2.289195 ACCCGAATTGCTAAACTCGACA 60.289 45.455 0.00 0.00 33.13 4.35
379 380 2.936498 CCCGAATTGCTAAACTCGACAT 59.064 45.455 0.00 0.00 33.13 3.06
380 381 4.116961 CCCGAATTGCTAAACTCGACATA 58.883 43.478 0.00 0.00 33.13 2.29
381 382 4.569162 CCCGAATTGCTAAACTCGACATAA 59.431 41.667 0.00 0.00 33.13 1.90
382 383 5.490213 CCGAATTGCTAAACTCGACATAAC 58.510 41.667 0.00 0.00 33.13 1.89
383 384 5.062934 CCGAATTGCTAAACTCGACATAACA 59.937 40.000 0.00 0.00 33.13 2.41
384 385 5.952064 CGAATTGCTAAACTCGACATAACAC 59.048 40.000 0.00 0.00 33.13 3.32
385 386 6.183360 CGAATTGCTAAACTCGACATAACACT 60.183 38.462 0.00 0.00 33.13 3.55
386 387 7.435068 AATTGCTAAACTCGACATAACACTT 57.565 32.000 0.00 0.00 0.00 3.16
387 388 6.854496 TTGCTAAACTCGACATAACACTTT 57.146 33.333 0.00 0.00 0.00 2.66
388 389 6.462073 TGCTAAACTCGACATAACACTTTC 57.538 37.500 0.00 0.00 0.00 2.62
389 390 5.118050 TGCTAAACTCGACATAACACTTTCG 59.882 40.000 0.00 0.00 0.00 3.46
390 391 5.344128 GCTAAACTCGACATAACACTTTCGA 59.656 40.000 0.00 0.00 38.13 3.71
391 392 6.129009 GCTAAACTCGACATAACACTTTCGAA 60.129 38.462 0.00 0.00 39.83 3.71
392 393 5.571778 AACTCGACATAACACTTTCGAAC 57.428 39.130 0.00 0.00 39.83 3.95
393 394 3.667261 ACTCGACATAACACTTTCGAACG 59.333 43.478 0.00 0.00 39.83 3.95
394 395 2.981805 TCGACATAACACTTTCGAACGG 59.018 45.455 6.60 1.39 37.55 4.44
395 396 2.727798 CGACATAACACTTTCGAACGGT 59.272 45.455 6.60 2.03 33.20 4.83
396 397 3.181546 CGACATAACACTTTCGAACGGTC 60.182 47.826 6.60 0.00 33.20 4.79
397 398 3.985925 GACATAACACTTTCGAACGGTCT 59.014 43.478 6.60 0.00 0.00 3.85
398 399 4.374399 ACATAACACTTTCGAACGGTCTT 58.626 39.130 6.60 2.15 0.00 3.01
399 400 5.531634 ACATAACACTTTCGAACGGTCTTA 58.468 37.500 6.60 4.14 0.00 2.10
400 401 6.161381 ACATAACACTTTCGAACGGTCTTAT 58.839 36.000 6.60 6.03 0.00 1.73
401 402 7.315142 ACATAACACTTTCGAACGGTCTTATA 58.685 34.615 6.60 0.00 0.00 0.98
402 403 7.274250 ACATAACACTTTCGAACGGTCTTATAC 59.726 37.037 6.60 0.00 0.00 1.47
403 404 5.125100 ACACTTTCGAACGGTCTTATACA 57.875 39.130 6.60 0.00 0.00 2.29
404 405 5.159209 ACACTTTCGAACGGTCTTATACAG 58.841 41.667 6.60 0.00 0.00 2.74
405 406 5.159209 CACTTTCGAACGGTCTTATACAGT 58.841 41.667 6.60 0.00 38.22 3.55
406 407 6.072508 ACACTTTCGAACGGTCTTATACAGTA 60.073 38.462 6.60 0.00 35.26 2.74
407 408 6.971184 CACTTTCGAACGGTCTTATACAGTAT 59.029 38.462 6.60 0.00 35.26 2.12
408 409 7.487189 CACTTTCGAACGGTCTTATACAGTATT 59.513 37.037 6.60 0.00 35.26 1.89
409 410 7.699812 ACTTTCGAACGGTCTTATACAGTATTC 59.300 37.037 6.60 0.00 35.26 1.75
410 411 6.064846 TCGAACGGTCTTATACAGTATTCC 57.935 41.667 0.00 0.00 35.26 3.01
411 412 5.009010 TCGAACGGTCTTATACAGTATTCCC 59.991 44.000 0.00 0.00 35.26 3.97
412 413 5.009410 CGAACGGTCTTATACAGTATTCCCT 59.991 44.000 0.00 0.00 35.26 4.20
413 414 6.402456 AACGGTCTTATACAGTATTCCCTC 57.598 41.667 0.00 0.00 35.26 4.30
414 415 5.452255 ACGGTCTTATACAGTATTCCCTCA 58.548 41.667 0.00 0.00 34.49 3.86
415 416 5.535406 ACGGTCTTATACAGTATTCCCTCAG 59.465 44.000 0.00 0.00 34.49 3.35
416 417 5.535406 CGGTCTTATACAGTATTCCCTCAGT 59.465 44.000 0.00 0.00 0.00 3.41
417 418 6.713903 CGGTCTTATACAGTATTCCCTCAGTA 59.286 42.308 0.00 0.00 0.00 2.74
418 419 7.230108 CGGTCTTATACAGTATTCCCTCAGTAA 59.770 40.741 0.00 0.00 0.00 2.24
419 420 8.921205 GGTCTTATACAGTATTCCCTCAGTAAA 58.079 37.037 0.00 0.00 0.00 2.01
420 421 9.968870 GTCTTATACAGTATTCCCTCAGTAAAG 57.031 37.037 0.00 0.00 0.00 1.85
421 422 9.931698 TCTTATACAGTATTCCCTCAGTAAAGA 57.068 33.333 0.00 0.00 0.00 2.52
434 435 9.268282 TCCCTCAGTAAAGAAATATAAGAGTGT 57.732 33.333 0.00 0.00 0.00 3.55
452 453 7.341445 AGAGTGTATAGATCACTTGAACTCC 57.659 40.000 0.00 0.00 44.68 3.85
453 454 6.322712 AGAGTGTATAGATCACTTGAACTCCC 59.677 42.308 0.00 0.00 44.68 4.30
454 455 6.198639 AGTGTATAGATCACTTGAACTCCCT 58.801 40.000 0.00 0.00 42.50 4.20
455 456 6.322712 AGTGTATAGATCACTTGAACTCCCTC 59.677 42.308 0.00 0.00 42.50 4.30
456 457 5.598830 TGTATAGATCACTTGAACTCCCTCC 59.401 44.000 0.00 0.00 0.00 4.30
457 458 2.907892 AGATCACTTGAACTCCCTCCA 58.092 47.619 0.00 0.00 0.00 3.86
458 459 3.458831 AGATCACTTGAACTCCCTCCAT 58.541 45.455 0.00 0.00 0.00 3.41
459 460 3.848975 AGATCACTTGAACTCCCTCCATT 59.151 43.478 0.00 0.00 0.00 3.16
460 461 4.290722 AGATCACTTGAACTCCCTCCATTT 59.709 41.667 0.00 0.00 0.00 2.32
461 462 5.488919 AGATCACTTGAACTCCCTCCATTTA 59.511 40.000 0.00 0.00 0.00 1.40
462 463 5.165961 TCACTTGAACTCCCTCCATTTAG 57.834 43.478 0.00 0.00 0.00 1.85
463 464 4.597507 TCACTTGAACTCCCTCCATTTAGT 59.402 41.667 0.00 0.00 0.00 2.24
464 465 4.938226 CACTTGAACTCCCTCCATTTAGTC 59.062 45.833 0.00 0.00 0.00 2.59
465 466 4.846940 ACTTGAACTCCCTCCATTTAGTCT 59.153 41.667 0.00 0.00 0.00 3.24
466 467 5.310857 ACTTGAACTCCCTCCATTTAGTCTT 59.689 40.000 0.00 0.00 0.00 3.01
467 468 5.843019 TGAACTCCCTCCATTTAGTCTTT 57.157 39.130 0.00 0.00 0.00 2.52
468 469 5.560724 TGAACTCCCTCCATTTAGTCTTTG 58.439 41.667 0.00 0.00 0.00 2.77
469 470 4.576330 ACTCCCTCCATTTAGTCTTTGG 57.424 45.455 0.00 0.00 0.00 3.28
470 471 4.175962 ACTCCCTCCATTTAGTCTTTGGA 58.824 43.478 0.00 0.00 37.20 3.53
479 480 7.689299 TCCATTTAGTCTTTGGAGAGATTTCA 58.311 34.615 0.00 0.00 34.65 2.69
480 481 8.331740 TCCATTTAGTCTTTGGAGAGATTTCAT 58.668 33.333 0.00 0.00 34.65 2.57
481 482 8.964772 CCATTTAGTCTTTGGAGAGATTTCATT 58.035 33.333 0.00 0.00 31.94 2.57
488 489 9.267084 GTCTTTGGAGAGATTTCATTATAGACC 57.733 37.037 0.00 0.00 31.07 3.85
489 490 8.992349 TCTTTGGAGAGATTTCATTATAGACCA 58.008 33.333 0.00 0.00 0.00 4.02
490 491 8.964476 TTTGGAGAGATTTCATTATAGACCAC 57.036 34.615 0.00 0.00 0.00 4.16
491 492 7.675161 TGGAGAGATTTCATTATAGACCACA 57.325 36.000 0.00 0.00 0.00 4.17
492 493 8.267620 TGGAGAGATTTCATTATAGACCACAT 57.732 34.615 0.00 0.00 0.00 3.21
493 494 8.717717 TGGAGAGATTTCATTATAGACCACATT 58.282 33.333 0.00 0.00 0.00 2.71
494 495 9.566432 GGAGAGATTTCATTATAGACCACATTT 57.434 33.333 0.00 0.00 0.00 2.32
499 500 9.455847 GATTTCATTATAGACCACATTTGAAGC 57.544 33.333 0.00 0.00 0.00 3.86
500 501 7.936496 TTCATTATAGACCACATTTGAAGCA 57.064 32.000 0.00 0.00 0.00 3.91
501 502 7.936496 TCATTATAGACCACATTTGAAGCAA 57.064 32.000 0.00 0.00 0.00 3.91
502 503 8.347004 TCATTATAGACCACATTTGAAGCAAA 57.653 30.769 0.00 0.00 37.75 3.68
503 504 8.801299 TCATTATAGACCACATTTGAAGCAAAA 58.199 29.630 0.00 0.00 36.90 2.44
504 505 9.590451 CATTATAGACCACATTTGAAGCAAAAT 57.410 29.630 0.00 0.00 36.90 1.82
506 507 5.534207 AGACCACATTTGAAGCAAAATGA 57.466 34.783 20.02 0.00 46.13 2.57
507 508 5.535333 AGACCACATTTGAAGCAAAATGAG 58.465 37.500 20.02 14.31 46.13 2.90
508 509 5.069516 AGACCACATTTGAAGCAAAATGAGT 59.930 36.000 20.02 16.64 46.13 3.41
509 510 5.051816 ACCACATTTGAAGCAAAATGAGTG 58.948 37.500 20.02 11.88 46.13 3.51
510 511 5.163426 ACCACATTTGAAGCAAAATGAGTGA 60.163 36.000 20.02 0.00 46.13 3.41
511 512 5.754406 CCACATTTGAAGCAAAATGAGTGAA 59.246 36.000 20.02 0.00 46.13 3.18
512 513 6.425721 CCACATTTGAAGCAAAATGAGTGAAT 59.574 34.615 20.02 1.41 46.13 2.57
513 514 7.359765 CCACATTTGAAGCAAAATGAGTGAATC 60.360 37.037 20.02 0.00 46.13 2.52
514 515 7.384115 CACATTTGAAGCAAAATGAGTGAATCT 59.616 33.333 20.02 0.33 46.13 2.40
515 516 8.579006 ACATTTGAAGCAAAATGAGTGAATCTA 58.421 29.630 20.02 0.00 46.13 1.98
516 517 8.857216 CATTTGAAGCAAAATGAGTGAATCTAC 58.143 33.333 11.88 0.00 46.13 2.59
517 518 7.509141 TTGAAGCAAAATGAGTGAATCTACA 57.491 32.000 0.00 0.00 0.00 2.74
518 519 6.902341 TGAAGCAAAATGAGTGAATCTACAC 58.098 36.000 0.00 0.00 40.60 2.90
552 553 7.739825 ACATCTATATACATCCATATGTGGGC 58.260 38.462 8.84 0.00 45.99 5.36
553 554 6.747414 TCTATATACATCCATATGTGGGCC 57.253 41.667 8.84 0.00 45.99 5.80
554 555 6.209026 TCTATATACATCCATATGTGGGCCA 58.791 40.000 0.00 0.00 45.99 5.36
555 556 5.999987 ATATACATCCATATGTGGGCCAT 57.000 39.130 10.70 0.00 45.99 4.40
556 557 8.016054 TCTATATACATCCATATGTGGGCCATA 58.984 37.037 10.70 7.76 45.99 2.74
557 558 5.794767 ATACATCCATATGTGGGCCATAA 57.205 39.130 10.70 0.85 45.99 1.90
558 559 4.680278 ACATCCATATGTGGGCCATAAT 57.320 40.909 10.70 9.85 44.79 1.28
559 560 5.794767 ACATCCATATGTGGGCCATAATA 57.205 39.130 10.70 11.94 44.79 0.98
560 561 5.759059 ACATCCATATGTGGGCCATAATAG 58.241 41.667 10.70 0.48 44.79 1.73
561 562 5.492162 ACATCCATATGTGGGCCATAATAGA 59.508 40.000 10.70 6.56 44.79 1.98
562 563 6.011717 ACATCCATATGTGGGCCATAATAGAA 60.012 38.462 10.70 1.98 44.79 2.10
563 564 6.656965 TCCATATGTGGGCCATAATAGAAT 57.343 37.500 10.70 0.00 46.06 2.40
564 565 6.662755 TCCATATGTGGGCCATAATAGAATC 58.337 40.000 10.70 0.00 46.06 2.52
565 566 6.448061 TCCATATGTGGGCCATAATAGAATCT 59.552 38.462 10.70 0.00 46.06 2.40
566 567 6.769822 CCATATGTGGGCCATAATAGAATCTC 59.230 42.308 10.70 0.00 42.11 2.75
567 568 7.366281 CCATATGTGGGCCATAATAGAATCTCT 60.366 40.741 10.70 0.00 42.11 3.10
568 569 8.708378 CATATGTGGGCCATAATAGAATCTCTA 58.292 37.037 10.70 0.00 39.43 2.43
569 570 6.360370 TGTGGGCCATAATAGAATCTCTAC 57.640 41.667 10.70 0.00 30.79 2.59
570 571 5.843969 TGTGGGCCATAATAGAATCTCTACA 59.156 40.000 10.70 0.00 30.79 2.74
571 572 6.501805 TGTGGGCCATAATAGAATCTCTACAT 59.498 38.462 10.70 0.00 30.79 2.29
572 573 7.678171 TGTGGGCCATAATAGAATCTCTACATA 59.322 37.037 10.70 0.00 30.79 2.29
573 574 8.200792 GTGGGCCATAATAGAATCTCTACATAG 58.799 40.741 10.70 0.00 30.79 2.23
574 575 7.901322 TGGGCCATAATAGAATCTCTACATAGT 59.099 37.037 0.00 0.00 30.79 2.12
575 576 9.422681 GGGCCATAATAGAATCTCTACATAGTA 57.577 37.037 4.39 0.00 30.79 1.82
662 663 5.961398 TTTTCCCGAATATTACAGAGGGA 57.039 39.130 9.64 9.64 45.31 4.20
664 665 4.194678 TCCCGAATATTACAGAGGGAGT 57.805 45.455 9.64 0.00 42.46 3.85
665 666 5.329191 TCCCGAATATTACAGAGGGAGTA 57.671 43.478 9.64 0.00 42.46 2.59
666 667 5.075493 TCCCGAATATTACAGAGGGAGTAC 58.925 45.833 9.64 0.00 42.46 2.73
667 668 5.078256 CCCGAATATTACAGAGGGAGTACT 58.922 45.833 0.00 0.00 41.26 2.73
668 669 6.044754 TCCCGAATATTACAGAGGGAGTACTA 59.955 42.308 0.00 0.00 42.46 1.82
669 670 6.890814 CCCGAATATTACAGAGGGAGTACTAT 59.109 42.308 0.00 0.00 41.26 2.12
670 671 8.051535 CCCGAATATTACAGAGGGAGTACTATA 58.948 40.741 0.00 0.00 41.26 1.31
671 672 8.891720 CCGAATATTACAGAGGGAGTACTATAC 58.108 40.741 0.00 0.00 0.00 1.47
672 673 9.445878 CGAATATTACAGAGGGAGTACTATACA 57.554 37.037 0.00 0.00 0.00 2.29
676 677 8.871629 ATTACAGAGGGAGTACTATACATCAG 57.128 38.462 0.00 0.00 0.00 2.90
677 678 5.074115 ACAGAGGGAGTACTATACATCAGC 58.926 45.833 0.00 0.00 0.00 4.26
761 774 8.216423 AGGAACCGACTATGTATTCTCTAACTA 58.784 37.037 0.00 0.00 0.00 2.24
2484 2598 4.082571 CCTCTTTTGTTCTGGCGAAATGAT 60.083 41.667 0.00 0.00 0.00 2.45
2501 2615 6.199908 CGAAATGATTATCTTCGAGTGCTCTT 59.800 38.462 9.93 0.00 43.53 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.862921 GCCTGCTACGAACACCTATAGC 60.863 54.545 0.00 0.00 40.40 2.97
1 2 2.361119 TGCCTGCTACGAACACCTATAG 59.639 50.000 0.00 0.00 0.00 1.31
2 3 2.100252 GTGCCTGCTACGAACACCTATA 59.900 50.000 0.00 0.00 0.00 1.31
3 4 1.134788 GTGCCTGCTACGAACACCTAT 60.135 52.381 0.00 0.00 0.00 2.57
4 5 0.245539 GTGCCTGCTACGAACACCTA 59.754 55.000 0.00 0.00 0.00 3.08
5 6 1.004918 GTGCCTGCTACGAACACCT 60.005 57.895 0.00 0.00 0.00 4.00
6 7 0.673644 ATGTGCCTGCTACGAACACC 60.674 55.000 0.00 0.00 0.00 4.16
7 8 0.443869 CATGTGCCTGCTACGAACAC 59.556 55.000 0.00 0.00 0.00 3.32
8 9 1.298157 GCATGTGCCTGCTACGAACA 61.298 55.000 0.00 0.00 39.12 3.18
9 10 1.425428 GCATGTGCCTGCTACGAAC 59.575 57.895 0.00 0.00 39.12 3.95
10 11 3.889227 GCATGTGCCTGCTACGAA 58.111 55.556 0.00 0.00 39.12 3.85
20 21 2.212652 TCATCGTCTATTGGCATGTGC 58.787 47.619 0.00 0.00 41.14 4.57
21 22 5.233225 AGTATCATCGTCTATTGGCATGTG 58.767 41.667 0.00 0.00 0.00 3.21
22 23 5.473931 GAGTATCATCGTCTATTGGCATGT 58.526 41.667 0.00 0.00 33.17 3.21
23 24 4.867047 GGAGTATCATCGTCTATTGGCATG 59.133 45.833 0.00 0.00 36.25 4.06
24 25 4.380973 CGGAGTATCATCGTCTATTGGCAT 60.381 45.833 0.00 0.00 36.25 4.40
25 26 3.057526 CGGAGTATCATCGTCTATTGGCA 60.058 47.826 0.00 0.00 36.25 4.92
26 27 3.502920 CGGAGTATCATCGTCTATTGGC 58.497 50.000 0.00 0.00 36.25 4.52
27 28 3.506455 ACCGGAGTATCATCGTCTATTGG 59.494 47.826 9.46 0.00 36.25 3.16
28 29 4.215613 TGACCGGAGTATCATCGTCTATTG 59.784 45.833 9.46 0.00 36.25 1.90
29 30 4.395625 TGACCGGAGTATCATCGTCTATT 58.604 43.478 9.46 0.00 36.25 1.73
30 31 4.017177 TGACCGGAGTATCATCGTCTAT 57.983 45.455 9.46 0.00 36.25 1.98
31 32 3.480505 TGACCGGAGTATCATCGTCTA 57.519 47.619 9.46 0.00 36.25 2.59
32 33 2.343484 TGACCGGAGTATCATCGTCT 57.657 50.000 9.46 0.00 36.25 4.18
33 34 2.859032 GCTTGACCGGAGTATCATCGTC 60.859 54.545 9.46 0.00 36.25 4.20
34 35 1.067212 GCTTGACCGGAGTATCATCGT 59.933 52.381 9.46 0.00 36.25 3.73
35 36 1.067060 TGCTTGACCGGAGTATCATCG 59.933 52.381 9.46 0.00 36.25 3.84
36 37 2.866762 GTTGCTTGACCGGAGTATCATC 59.133 50.000 9.46 0.00 36.25 2.92
37 38 2.501723 AGTTGCTTGACCGGAGTATCAT 59.498 45.455 9.46 0.00 36.25 2.45
38 39 1.899814 AGTTGCTTGACCGGAGTATCA 59.100 47.619 9.46 0.00 36.25 2.15
39 40 2.674796 AGTTGCTTGACCGGAGTATC 57.325 50.000 9.46 0.00 0.00 2.24
40 41 3.074412 CAAAGTTGCTTGACCGGAGTAT 58.926 45.455 9.46 0.00 0.00 2.12
41 42 2.489971 CAAAGTTGCTTGACCGGAGTA 58.510 47.619 9.46 0.00 0.00 2.59
42 43 1.308998 CAAAGTTGCTTGACCGGAGT 58.691 50.000 9.46 0.00 0.00 3.85
43 44 0.593128 CCAAAGTTGCTTGACCGGAG 59.407 55.000 9.46 0.00 0.00 4.63
44 45 0.181587 TCCAAAGTTGCTTGACCGGA 59.818 50.000 9.46 0.00 0.00 5.14
45 46 1.028905 TTCCAAAGTTGCTTGACCGG 58.971 50.000 0.00 0.00 0.00 5.28
46 47 2.664916 CATTCCAAAGTTGCTTGACCG 58.335 47.619 0.00 0.00 0.00 4.79
47 48 2.036346 AGCATTCCAAAGTTGCTTGACC 59.964 45.455 0.00 0.00 43.94 4.02
48 49 3.005155 AGAGCATTCCAAAGTTGCTTGAC 59.995 43.478 0.00 0.00 46.21 3.18
49 50 3.225104 AGAGCATTCCAAAGTTGCTTGA 58.775 40.909 0.00 0.00 46.21 3.02
50 51 3.572584 GAGAGCATTCCAAAGTTGCTTG 58.427 45.455 0.00 0.00 46.21 4.01
51 52 2.227388 CGAGAGCATTCCAAAGTTGCTT 59.773 45.455 0.00 0.00 46.21 3.91
53 54 1.806542 TCGAGAGCATTCCAAAGTTGC 59.193 47.619 0.00 0.00 36.63 4.17
54 55 2.160417 GGTCGAGAGCATTCCAAAGTTG 59.840 50.000 0.00 0.00 0.00 3.16
55 56 2.039084 AGGTCGAGAGCATTCCAAAGTT 59.961 45.455 5.06 0.00 0.00 2.66
56 57 1.625818 AGGTCGAGAGCATTCCAAAGT 59.374 47.619 5.06 0.00 0.00 2.66
57 58 2.005451 CAGGTCGAGAGCATTCCAAAG 58.995 52.381 5.06 0.00 0.00 2.77
58 59 1.347707 ACAGGTCGAGAGCATTCCAAA 59.652 47.619 5.06 0.00 0.00 3.28
59 60 0.976641 ACAGGTCGAGAGCATTCCAA 59.023 50.000 5.06 0.00 0.00 3.53
60 61 0.976641 AACAGGTCGAGAGCATTCCA 59.023 50.000 5.06 0.00 0.00 3.53
61 62 2.100605 AAACAGGTCGAGAGCATTCC 57.899 50.000 5.06 0.00 0.00 3.01
62 63 5.803020 ATTTAAACAGGTCGAGAGCATTC 57.197 39.130 5.06 0.00 0.00 2.67
63 64 6.575162 AAATTTAAACAGGTCGAGAGCATT 57.425 33.333 5.06 0.27 0.00 3.56
64 65 6.575162 AAAATTTAAACAGGTCGAGAGCAT 57.425 33.333 5.06 0.00 0.00 3.79
65 66 6.385649 AAAAATTTAAACAGGTCGAGAGCA 57.614 33.333 5.06 0.00 0.00 4.26
66 67 5.564127 CGAAAAATTTAAACAGGTCGAGAGC 59.436 40.000 7.16 0.00 0.00 4.09
67 68 6.790825 GTCGAAAAATTTAAACAGGTCGAGAG 59.209 38.462 13.19 0.00 36.99 3.20
68 69 6.293027 GGTCGAAAAATTTAAACAGGTCGAGA 60.293 38.462 13.19 0.00 36.99 4.04
69 70 5.849604 GGTCGAAAAATTTAAACAGGTCGAG 59.150 40.000 13.19 0.00 36.99 4.04
70 71 5.296283 TGGTCGAAAAATTTAAACAGGTCGA 59.704 36.000 10.23 10.23 34.20 4.20
71 72 5.512473 TGGTCGAAAAATTTAAACAGGTCG 58.488 37.500 0.00 0.00 0.00 4.79
72 73 6.976349 ACTTGGTCGAAAAATTTAAACAGGTC 59.024 34.615 0.00 0.00 0.00 3.85
73 74 6.869695 ACTTGGTCGAAAAATTTAAACAGGT 58.130 32.000 0.00 0.00 0.00 4.00
74 75 7.254286 CCAACTTGGTCGAAAAATTTAAACAGG 60.254 37.037 0.00 0.00 31.35 4.00
75 76 7.617557 CCAACTTGGTCGAAAAATTTAAACAG 58.382 34.615 0.00 0.00 31.35 3.16
76 77 6.036191 GCCAACTTGGTCGAAAAATTTAAACA 59.964 34.615 9.63 0.00 40.46 2.83
77 78 6.256975 AGCCAACTTGGTCGAAAAATTTAAAC 59.743 34.615 9.63 0.00 40.46 2.01
78 79 6.342111 AGCCAACTTGGTCGAAAAATTTAAA 58.658 32.000 9.63 0.00 40.46 1.52
79 80 5.908341 AGCCAACTTGGTCGAAAAATTTAA 58.092 33.333 9.63 0.00 40.46 1.52
80 81 5.523438 AGCCAACTTGGTCGAAAAATTTA 57.477 34.783 9.63 0.00 40.46 1.40
81 82 4.400529 AGCCAACTTGGTCGAAAAATTT 57.599 36.364 9.63 0.00 40.46 1.82
82 83 4.400529 AAGCCAACTTGGTCGAAAAATT 57.599 36.364 9.63 0.00 40.46 1.82
100 101 2.820037 GGAGGCGGCAGTACAAGC 60.820 66.667 13.08 0.00 0.00 4.01
101 102 1.448540 CAGGAGGCGGCAGTACAAG 60.449 63.158 13.08 0.00 0.00 3.16
102 103 2.662596 CAGGAGGCGGCAGTACAA 59.337 61.111 13.08 0.00 0.00 2.41
103 104 3.390521 CCAGGAGGCGGCAGTACA 61.391 66.667 13.08 0.00 0.00 2.90
122 123 4.010349 ACCATTCTAAGTTAGCCACAAGC 58.990 43.478 4.93 0.00 44.25 4.01
123 124 6.407202 AGTACCATTCTAAGTTAGCCACAAG 58.593 40.000 4.93 0.00 0.00 3.16
124 125 6.368779 AGTACCATTCTAAGTTAGCCACAA 57.631 37.500 4.93 0.00 0.00 3.33
125 126 6.405065 CGTAGTACCATTCTAAGTTAGCCACA 60.405 42.308 4.93 0.00 0.00 4.17
126 127 5.975939 CGTAGTACCATTCTAAGTTAGCCAC 59.024 44.000 4.93 0.00 0.00 5.01
127 128 5.653769 ACGTAGTACCATTCTAAGTTAGCCA 59.346 40.000 4.93 0.00 41.94 4.75
128 129 6.141560 ACGTAGTACCATTCTAAGTTAGCC 57.858 41.667 4.93 0.00 41.94 3.93
145 146 8.378324 AAGTTTTCTTCTTGCATCTGACGTAGT 61.378 37.037 0.00 0.00 38.99 2.73
146 147 5.406780 AGTTTTCTTCTTGCATCTGACGTAG 59.593 40.000 0.00 0.00 0.00 3.51
147 148 5.297547 AGTTTTCTTCTTGCATCTGACGTA 58.702 37.500 0.00 0.00 0.00 3.57
148 149 4.130118 AGTTTTCTTCTTGCATCTGACGT 58.870 39.130 0.00 0.00 0.00 4.34
149 150 4.739046 AGTTTTCTTCTTGCATCTGACG 57.261 40.909 0.00 0.00 0.00 4.35
150 151 7.761651 AAAAAGTTTTCTTCTTGCATCTGAC 57.238 32.000 0.32 0.00 39.48 3.51
185 186 8.360390 GGTTCATCTAACTGAATTGAAAAGGTT 58.640 33.333 0.00 0.00 37.47 3.50
186 187 7.725844 AGGTTCATCTAACTGAATTGAAAAGGT 59.274 33.333 0.00 0.00 37.47 3.50
187 188 8.025445 CAGGTTCATCTAACTGAATTGAAAAGG 58.975 37.037 0.00 0.00 37.47 3.11
188 189 7.540055 GCAGGTTCATCTAACTGAATTGAAAAG 59.460 37.037 0.00 0.00 37.47 2.27
189 190 7.231317 AGCAGGTTCATCTAACTGAATTGAAAA 59.769 33.333 0.00 0.00 37.47 2.29
190 191 6.716628 AGCAGGTTCATCTAACTGAATTGAAA 59.283 34.615 0.00 0.00 37.47 2.69
191 192 6.240894 AGCAGGTTCATCTAACTGAATTGAA 58.759 36.000 0.00 0.00 37.47 2.69
192 193 5.809001 AGCAGGTTCATCTAACTGAATTGA 58.191 37.500 0.00 0.00 37.47 2.57
193 194 5.220548 CGAGCAGGTTCATCTAACTGAATTG 60.221 44.000 0.00 0.00 37.47 2.32
194 195 4.872691 CGAGCAGGTTCATCTAACTGAATT 59.127 41.667 0.00 0.00 37.47 2.17
195 196 4.437239 CGAGCAGGTTCATCTAACTGAAT 58.563 43.478 0.00 0.00 37.47 2.57
196 197 3.368427 CCGAGCAGGTTCATCTAACTGAA 60.368 47.826 0.00 0.00 38.23 3.02
197 198 2.166459 CCGAGCAGGTTCATCTAACTGA 59.834 50.000 0.00 0.00 38.23 3.41
198 199 2.544685 CCGAGCAGGTTCATCTAACTG 58.455 52.381 0.00 0.00 38.23 3.16
199 200 2.969628 CCGAGCAGGTTCATCTAACT 57.030 50.000 0.00 0.00 38.23 2.24
213 214 1.725931 CGAAAATTGTCTGCACCGAGC 60.726 52.381 0.00 0.00 45.96 5.03
214 215 1.798223 TCGAAAATTGTCTGCACCGAG 59.202 47.619 0.00 0.00 0.00 4.63
215 216 1.872388 TCGAAAATTGTCTGCACCGA 58.128 45.000 0.00 0.00 0.00 4.69
216 217 2.679355 TTCGAAAATTGTCTGCACCG 57.321 45.000 0.00 0.00 0.00 4.94
217 218 3.182372 GCTTTTCGAAAATTGTCTGCACC 59.818 43.478 22.73 0.00 0.00 5.01
218 219 4.044426 AGCTTTTCGAAAATTGTCTGCAC 58.956 39.130 22.73 5.51 0.00 4.57
219 220 4.305989 AGCTTTTCGAAAATTGTCTGCA 57.694 36.364 22.73 0.00 0.00 4.41
220 221 6.803807 AGAATAGCTTTTCGAAAATTGTCTGC 59.196 34.615 22.73 19.84 0.00 4.26
221 222 7.201299 GCAGAATAGCTTTTCGAAAATTGTCTG 60.201 37.037 26.01 26.01 0.00 3.51
222 223 6.803807 GCAGAATAGCTTTTCGAAAATTGTCT 59.196 34.615 22.73 17.80 0.00 3.41
223 224 6.237045 CGCAGAATAGCTTTTCGAAAATTGTC 60.237 38.462 22.73 15.03 0.00 3.18
224 225 5.569059 CGCAGAATAGCTTTTCGAAAATTGT 59.431 36.000 22.73 10.56 0.00 2.71
225 226 5.003778 CCGCAGAATAGCTTTTCGAAAATTG 59.996 40.000 22.73 13.66 0.00 2.32
226 227 5.095490 CCGCAGAATAGCTTTTCGAAAATT 58.905 37.500 22.73 14.34 0.00 1.82
227 228 4.438744 CCCGCAGAATAGCTTTTCGAAAAT 60.439 41.667 22.73 12.27 0.00 1.82
228 229 3.119990 CCCGCAGAATAGCTTTTCGAAAA 60.120 43.478 21.35 21.35 0.00 2.29
229 230 2.418628 CCCGCAGAATAGCTTTTCGAAA 59.581 45.455 6.47 6.47 0.00 3.46
230 231 2.006888 CCCGCAGAATAGCTTTTCGAA 58.993 47.619 10.70 0.00 0.00 3.71
231 232 1.651987 CCCGCAGAATAGCTTTTCGA 58.348 50.000 10.70 0.00 0.00 3.71
232 233 0.028110 GCCCGCAGAATAGCTTTTCG 59.972 55.000 10.70 7.56 0.00 3.46
233 234 1.383523 AGCCCGCAGAATAGCTTTTC 58.616 50.000 8.70 8.70 29.27 2.29
234 235 1.474077 CAAGCCCGCAGAATAGCTTTT 59.526 47.619 0.00 0.00 42.74 2.27
235 236 1.098050 CAAGCCCGCAGAATAGCTTT 58.902 50.000 0.00 0.00 42.74 3.51
236 237 0.749454 CCAAGCCCGCAGAATAGCTT 60.749 55.000 0.00 0.00 46.10 3.74
237 238 1.153086 CCAAGCCCGCAGAATAGCT 60.153 57.895 0.00 0.00 37.10 3.32
238 239 2.189499 CCCAAGCCCGCAGAATAGC 61.189 63.158 0.00 0.00 0.00 2.97
239 240 2.189499 GCCCAAGCCCGCAGAATAG 61.189 63.158 0.00 0.00 0.00 1.73
240 241 2.124320 GCCCAAGCCCGCAGAATA 60.124 61.111 0.00 0.00 0.00 1.75
241 242 2.210144 TAAGCCCAAGCCCGCAGAAT 62.210 55.000 0.00 0.00 41.25 2.40
242 243 2.419011 TTAAGCCCAAGCCCGCAGAA 62.419 55.000 0.00 0.00 41.25 3.02
243 244 2.901281 TTAAGCCCAAGCCCGCAGA 61.901 57.895 0.00 0.00 41.25 4.26
244 245 2.361104 TTAAGCCCAAGCCCGCAG 60.361 61.111 0.00 0.00 41.25 5.18
245 246 2.675075 GTTAAGCCCAAGCCCGCA 60.675 61.111 0.00 0.00 41.25 5.69
246 247 1.532604 AAAGTTAAGCCCAAGCCCGC 61.533 55.000 0.00 0.00 41.25 6.13
247 248 0.243636 CAAAGTTAAGCCCAAGCCCG 59.756 55.000 0.00 0.00 41.25 6.13
248 249 1.627864 TCAAAGTTAAGCCCAAGCCC 58.372 50.000 0.00 0.00 41.25 5.19
249 250 2.562738 ACATCAAAGTTAAGCCCAAGCC 59.437 45.455 0.00 0.00 41.25 4.35
250 251 3.942130 ACATCAAAGTTAAGCCCAAGC 57.058 42.857 0.00 0.00 40.32 4.01
251 252 7.624360 TGTATACATCAAAGTTAAGCCCAAG 57.376 36.000 0.08 0.00 0.00 3.61
252 253 7.885922 TCTTGTATACATCAAAGTTAAGCCCAA 59.114 33.333 6.36 0.00 0.00 4.12
253 254 7.398829 TCTTGTATACATCAAAGTTAAGCCCA 58.601 34.615 6.36 0.00 0.00 5.36
254 255 7.859325 TCTTGTATACATCAAAGTTAAGCCC 57.141 36.000 6.36 0.00 0.00 5.19
260 261 9.905713 ATGGTGTATCTTGTATACATCAAAGTT 57.094 29.630 13.42 0.00 45.35 2.66
261 262 9.330063 CATGGTGTATCTTGTATACATCAAAGT 57.670 33.333 13.42 0.00 45.35 2.66
262 263 9.330063 ACATGGTGTATCTTGTATACATCAAAG 57.670 33.333 13.42 11.65 45.35 2.77
263 264 9.325198 GACATGGTGTATCTTGTATACATCAAA 57.675 33.333 13.42 0.00 45.35 2.69
264 265 8.704668 AGACATGGTGTATCTTGTATACATCAA 58.295 33.333 13.42 0.00 45.35 2.57
265 266 8.250143 AGACATGGTGTATCTTGTATACATCA 57.750 34.615 12.17 12.17 45.99 3.07
271 272 8.928448 ACTGAATAGACATGGTGTATCTTGTAT 58.072 33.333 0.00 0.00 0.00 2.29
272 273 8.197439 CACTGAATAGACATGGTGTATCTTGTA 58.803 37.037 0.00 0.00 0.00 2.41
273 274 7.044181 CACTGAATAGACATGGTGTATCTTGT 58.956 38.462 0.00 0.00 0.00 3.16
274 275 7.223582 GTCACTGAATAGACATGGTGTATCTTG 59.776 40.741 0.00 0.00 34.93 3.02
275 276 7.268586 GTCACTGAATAGACATGGTGTATCTT 58.731 38.462 0.00 0.00 34.93 2.40
276 277 6.183360 GGTCACTGAATAGACATGGTGTATCT 60.183 42.308 0.00 0.00 36.50 1.98
277 278 5.986135 GGTCACTGAATAGACATGGTGTATC 59.014 44.000 0.00 0.00 36.50 2.24
278 279 5.663106 AGGTCACTGAATAGACATGGTGTAT 59.337 40.000 0.00 0.00 36.50 2.29
279 280 5.023452 AGGTCACTGAATAGACATGGTGTA 58.977 41.667 0.00 0.00 36.50 2.90
280 281 3.840666 AGGTCACTGAATAGACATGGTGT 59.159 43.478 0.00 0.00 36.50 4.16
281 282 4.478206 AGGTCACTGAATAGACATGGTG 57.522 45.455 0.00 0.00 36.50 4.17
282 283 6.440647 TCTTTAGGTCACTGAATAGACATGGT 59.559 38.462 0.00 0.00 36.50 3.55
283 284 6.758886 GTCTTTAGGTCACTGAATAGACATGG 59.241 42.308 0.00 0.00 36.50 3.66
284 285 7.323420 TGTCTTTAGGTCACTGAATAGACATG 58.677 38.462 0.00 0.00 36.50 3.21
285 286 7.482169 TGTCTTTAGGTCACTGAATAGACAT 57.518 36.000 0.00 0.00 36.50 3.06
286 287 6.911250 TGTCTTTAGGTCACTGAATAGACA 57.089 37.500 0.00 0.00 36.50 3.41
287 288 8.088981 TCTTTGTCTTTAGGTCACTGAATAGAC 58.911 37.037 0.00 0.00 0.00 2.59
288 289 8.088981 GTCTTTGTCTTTAGGTCACTGAATAGA 58.911 37.037 0.00 0.00 0.00 1.98
289 290 8.091449 AGTCTTTGTCTTTAGGTCACTGAATAG 58.909 37.037 0.00 0.00 0.00 1.73
290 291 7.963532 AGTCTTTGTCTTTAGGTCACTGAATA 58.036 34.615 0.00 0.00 0.00 1.75
291 292 6.831976 AGTCTTTGTCTTTAGGTCACTGAAT 58.168 36.000 0.00 0.00 0.00 2.57
292 293 6.235231 AGTCTTTGTCTTTAGGTCACTGAA 57.765 37.500 0.00 0.00 0.00 3.02
293 294 5.871396 AGTCTTTGTCTTTAGGTCACTGA 57.129 39.130 0.00 0.00 0.00 3.41
294 295 6.982852 TCTAGTCTTTGTCTTTAGGTCACTG 58.017 40.000 0.00 0.00 0.00 3.66
295 296 7.598759 TTCTAGTCTTTGTCTTTAGGTCACT 57.401 36.000 0.00 0.00 0.00 3.41
296 297 8.834749 ATTTCTAGTCTTTGTCTTTAGGTCAC 57.165 34.615 0.00 0.00 0.00 3.67
297 298 9.847224 AAATTTCTAGTCTTTGTCTTTAGGTCA 57.153 29.630 0.00 0.00 0.00 4.02
299 300 9.847224 TGAAATTTCTAGTCTTTGTCTTTAGGT 57.153 29.630 18.64 0.00 0.00 3.08
302 303 8.770828 CGGTGAAATTTCTAGTCTTTGTCTTTA 58.229 33.333 18.64 0.00 0.00 1.85
303 304 7.255139 CCGGTGAAATTTCTAGTCTTTGTCTTT 60.255 37.037 18.64 0.00 0.00 2.52
304 305 6.204882 CCGGTGAAATTTCTAGTCTTTGTCTT 59.795 38.462 18.64 0.00 0.00 3.01
305 306 5.701290 CCGGTGAAATTTCTAGTCTTTGTCT 59.299 40.000 18.64 0.00 0.00 3.41
306 307 5.699458 TCCGGTGAAATTTCTAGTCTTTGTC 59.301 40.000 18.64 0.00 0.00 3.18
307 308 5.469084 GTCCGGTGAAATTTCTAGTCTTTGT 59.531 40.000 18.64 0.00 0.00 2.83
308 309 5.701290 AGTCCGGTGAAATTTCTAGTCTTTG 59.299 40.000 18.64 1.42 0.00 2.77
309 310 5.866207 AGTCCGGTGAAATTTCTAGTCTTT 58.134 37.500 18.64 0.00 0.00 2.52
310 311 5.485209 AGTCCGGTGAAATTTCTAGTCTT 57.515 39.130 18.64 0.00 0.00 3.01
311 312 6.600882 TTAGTCCGGTGAAATTTCTAGTCT 57.399 37.500 18.64 11.38 0.00 3.24
312 313 5.291371 GCTTAGTCCGGTGAAATTTCTAGTC 59.709 44.000 18.64 7.10 0.00 2.59
313 314 5.176592 GCTTAGTCCGGTGAAATTTCTAGT 58.823 41.667 18.64 5.50 0.00 2.57
314 315 5.175859 TGCTTAGTCCGGTGAAATTTCTAG 58.824 41.667 18.64 9.75 0.00 2.43
315 316 5.155278 TGCTTAGTCCGGTGAAATTTCTA 57.845 39.130 18.64 3.30 0.00 2.10
316 317 4.015872 TGCTTAGTCCGGTGAAATTTCT 57.984 40.909 18.64 0.00 0.00 2.52
317 318 4.759516 TTGCTTAGTCCGGTGAAATTTC 57.240 40.909 11.41 11.41 0.00 2.17
318 319 5.163499 TGTTTTGCTTAGTCCGGTGAAATTT 60.163 36.000 0.00 0.00 0.00 1.82
319 320 4.339814 TGTTTTGCTTAGTCCGGTGAAATT 59.660 37.500 0.00 0.00 0.00 1.82
320 321 3.886505 TGTTTTGCTTAGTCCGGTGAAAT 59.113 39.130 0.00 0.00 0.00 2.17
321 322 3.280295 TGTTTTGCTTAGTCCGGTGAAA 58.720 40.909 0.00 0.00 0.00 2.69
322 323 2.875933 CTGTTTTGCTTAGTCCGGTGAA 59.124 45.455 0.00 0.00 0.00 3.18
323 324 2.103432 TCTGTTTTGCTTAGTCCGGTGA 59.897 45.455 0.00 0.00 0.00 4.02
324 325 2.489971 TCTGTTTTGCTTAGTCCGGTG 58.510 47.619 0.00 0.00 0.00 4.94
325 326 2.922740 TCTGTTTTGCTTAGTCCGGT 57.077 45.000 0.00 0.00 0.00 5.28
326 327 4.561735 TTTTCTGTTTTGCTTAGTCCGG 57.438 40.909 0.00 0.00 0.00 5.14
346 347 8.552865 GTTTAGCAATTCGGGTTAAACATTTTT 58.447 29.630 8.11 0.00 39.90 1.94
347 348 7.929245 AGTTTAGCAATTCGGGTTAAACATTTT 59.071 29.630 12.85 0.00 41.48 1.82
348 349 7.438564 AGTTTAGCAATTCGGGTTAAACATTT 58.561 30.769 12.85 0.00 41.48 2.32
349 350 6.988522 AGTTTAGCAATTCGGGTTAAACATT 58.011 32.000 12.85 0.00 41.48 2.71
350 351 6.584185 AGTTTAGCAATTCGGGTTAAACAT 57.416 33.333 12.85 1.33 41.48 2.71
351 352 5.334260 CGAGTTTAGCAATTCGGGTTAAACA 60.334 40.000 12.85 0.00 41.48 2.83
352 353 5.084055 CGAGTTTAGCAATTCGGGTTAAAC 58.916 41.667 0.00 0.00 40.22 2.01
353 354 4.996122 TCGAGTTTAGCAATTCGGGTTAAA 59.004 37.500 2.60 0.00 41.27 1.52
354 355 4.389687 GTCGAGTTTAGCAATTCGGGTTAA 59.610 41.667 2.60 0.00 41.27 2.01
355 356 3.928375 GTCGAGTTTAGCAATTCGGGTTA 59.072 43.478 2.60 0.00 41.27 2.85
356 357 2.740447 GTCGAGTTTAGCAATTCGGGTT 59.260 45.455 2.60 0.00 41.27 4.11
357 358 2.289195 TGTCGAGTTTAGCAATTCGGGT 60.289 45.455 2.60 0.00 41.27 5.28
358 359 2.343101 TGTCGAGTTTAGCAATTCGGG 58.657 47.619 2.60 0.00 41.27 5.14
359 360 5.062934 TGTTATGTCGAGTTTAGCAATTCGG 59.937 40.000 2.60 0.00 41.27 4.30
360 361 5.952064 GTGTTATGTCGAGTTTAGCAATTCG 59.048 40.000 0.00 0.00 42.05 3.34
361 362 7.061752 AGTGTTATGTCGAGTTTAGCAATTC 57.938 36.000 0.00 0.00 0.00 2.17
362 363 7.435068 AAGTGTTATGTCGAGTTTAGCAATT 57.565 32.000 0.00 0.00 0.00 2.32
363 364 7.435068 AAAGTGTTATGTCGAGTTTAGCAAT 57.565 32.000 0.00 0.00 0.00 3.56
364 365 6.346279 CGAAAGTGTTATGTCGAGTTTAGCAA 60.346 38.462 0.00 0.00 35.54 3.91
365 366 5.118050 CGAAAGTGTTATGTCGAGTTTAGCA 59.882 40.000 0.00 0.00 35.54 3.49
366 367 5.344128 TCGAAAGTGTTATGTCGAGTTTAGC 59.656 40.000 0.00 0.00 37.58 3.09
367 368 6.922980 TCGAAAGTGTTATGTCGAGTTTAG 57.077 37.500 0.00 0.00 37.58 1.85
368 369 6.129378 CGTTCGAAAGTGTTATGTCGAGTTTA 60.129 38.462 0.00 0.00 42.83 2.01
369 370 5.332055 CGTTCGAAAGTGTTATGTCGAGTTT 60.332 40.000 0.00 0.00 42.83 2.66
370 371 4.147653 CGTTCGAAAGTGTTATGTCGAGTT 59.852 41.667 0.00 0.00 42.83 3.01
371 372 3.667261 CGTTCGAAAGTGTTATGTCGAGT 59.333 43.478 0.00 0.00 42.83 4.18
372 373 3.059044 CCGTTCGAAAGTGTTATGTCGAG 59.941 47.826 10.21 0.00 42.83 4.04
373 374 2.981805 CCGTTCGAAAGTGTTATGTCGA 59.018 45.455 10.21 0.00 40.51 4.20
374 375 2.727798 ACCGTTCGAAAGTGTTATGTCG 59.272 45.455 10.21 0.79 34.85 4.35
375 376 3.985925 AGACCGTTCGAAAGTGTTATGTC 59.014 43.478 10.21 8.63 0.00 3.06
376 377 3.986277 AGACCGTTCGAAAGTGTTATGT 58.014 40.909 10.21 0.00 0.00 2.29
377 378 4.985044 AAGACCGTTCGAAAGTGTTATG 57.015 40.909 10.21 0.00 0.00 1.90
378 379 7.315142 TGTATAAGACCGTTCGAAAGTGTTAT 58.685 34.615 23.68 23.68 35.11 1.89
379 380 6.676950 TGTATAAGACCGTTCGAAAGTGTTA 58.323 36.000 16.57 16.57 0.00 2.41
380 381 5.531634 TGTATAAGACCGTTCGAAAGTGTT 58.468 37.500 14.03 14.03 0.00 3.32
381 382 5.125100 TGTATAAGACCGTTCGAAAGTGT 57.875 39.130 10.21 7.50 0.00 3.55
382 383 5.159209 ACTGTATAAGACCGTTCGAAAGTG 58.841 41.667 10.21 4.49 0.00 3.16
383 384 5.382618 ACTGTATAAGACCGTTCGAAAGT 57.617 39.130 10.21 6.08 0.00 2.66
384 385 7.167136 GGAATACTGTATAAGACCGTTCGAAAG 59.833 40.741 0.00 0.51 0.00 2.62
385 386 6.974622 GGAATACTGTATAAGACCGTTCGAAA 59.025 38.462 0.00 0.00 0.00 3.46
386 387 6.460123 GGGAATACTGTATAAGACCGTTCGAA 60.460 42.308 0.00 0.00 0.00 3.71
387 388 5.009010 GGGAATACTGTATAAGACCGTTCGA 59.991 44.000 0.00 0.00 0.00 3.71
388 389 5.009410 AGGGAATACTGTATAAGACCGTTCG 59.991 44.000 0.00 0.00 0.00 3.95
389 390 6.040166 TGAGGGAATACTGTATAAGACCGTTC 59.960 42.308 0.00 5.55 0.00 3.95
390 391 5.895534 TGAGGGAATACTGTATAAGACCGTT 59.104 40.000 0.00 0.00 0.00 4.44
391 392 5.452255 TGAGGGAATACTGTATAAGACCGT 58.548 41.667 0.00 4.87 0.00 4.83
392 393 5.535406 ACTGAGGGAATACTGTATAAGACCG 59.465 44.000 0.00 0.00 0.00 4.79
393 394 6.980416 ACTGAGGGAATACTGTATAAGACC 57.020 41.667 0.00 1.99 0.00 3.85
394 395 9.968870 CTTTACTGAGGGAATACTGTATAAGAC 57.031 37.037 0.00 0.00 0.00 3.01
395 396 9.931698 TCTTTACTGAGGGAATACTGTATAAGA 57.068 33.333 0.00 0.32 0.00 2.10
408 409 9.268282 ACACTCTTATATTTCTTTACTGAGGGA 57.732 33.333 0.00 0.00 0.00 4.20
426 427 8.904834 GGAGTTCAAGTGATCTATACACTCTTA 58.095 37.037 0.00 0.00 46.01 2.10
427 428 7.147811 GGGAGTTCAAGTGATCTATACACTCTT 60.148 40.741 0.00 0.00 46.01 2.85
428 429 6.322712 GGGAGTTCAAGTGATCTATACACTCT 59.677 42.308 0.00 0.00 46.01 3.24
429 430 6.322712 AGGGAGTTCAAGTGATCTATACACTC 59.677 42.308 0.00 0.00 46.01 3.51
431 432 6.461788 GGAGGGAGTTCAAGTGATCTATACAC 60.462 46.154 0.00 0.00 38.38 2.90
432 433 5.598830 GGAGGGAGTTCAAGTGATCTATACA 59.401 44.000 0.00 0.00 0.00 2.29
433 434 5.598830 TGGAGGGAGTTCAAGTGATCTATAC 59.401 44.000 0.00 0.00 0.00 1.47
434 435 5.777449 TGGAGGGAGTTCAAGTGATCTATA 58.223 41.667 0.00 0.00 0.00 1.31
435 436 4.624913 TGGAGGGAGTTCAAGTGATCTAT 58.375 43.478 0.00 0.00 0.00 1.98
436 437 4.061131 TGGAGGGAGTTCAAGTGATCTA 57.939 45.455 0.00 0.00 0.00 1.98
437 438 2.907892 TGGAGGGAGTTCAAGTGATCT 58.092 47.619 0.00 0.00 0.00 2.75
438 439 3.922171 ATGGAGGGAGTTCAAGTGATC 57.078 47.619 0.00 0.00 0.00 2.92
439 440 4.664688 AAATGGAGGGAGTTCAAGTGAT 57.335 40.909 0.00 0.00 0.00 3.06
440 441 4.597507 ACTAAATGGAGGGAGTTCAAGTGA 59.402 41.667 0.00 0.00 0.00 3.41
441 442 4.911390 ACTAAATGGAGGGAGTTCAAGTG 58.089 43.478 0.00 0.00 0.00 3.16
442 443 4.846940 AGACTAAATGGAGGGAGTTCAAGT 59.153 41.667 0.00 0.00 0.00 3.16
443 444 5.428184 AGACTAAATGGAGGGAGTTCAAG 57.572 43.478 0.00 0.00 0.00 3.02
444 445 5.843019 AAGACTAAATGGAGGGAGTTCAA 57.157 39.130 0.00 0.00 0.00 2.69
445 446 5.514834 CCAAAGACTAAATGGAGGGAGTTCA 60.515 44.000 0.00 0.00 36.27 3.18
446 447 4.944317 CCAAAGACTAAATGGAGGGAGTTC 59.056 45.833 0.00 0.00 36.27 3.01
447 448 4.601857 TCCAAAGACTAAATGGAGGGAGTT 59.398 41.667 1.46 0.00 38.30 3.01
448 449 4.175962 TCCAAAGACTAAATGGAGGGAGT 58.824 43.478 1.46 0.00 38.30 3.85
449 450 4.844349 TCCAAAGACTAAATGGAGGGAG 57.156 45.455 1.46 0.00 38.30 4.30
454 455 7.689299 TGAAATCTCTCCAAAGACTAAATGGA 58.311 34.615 4.90 4.90 40.84 3.41
455 456 7.928307 TGAAATCTCTCCAAAGACTAAATGG 57.072 36.000 0.00 0.00 35.49 3.16
462 463 9.267084 GGTCTATAATGAAATCTCTCCAAAGAC 57.733 37.037 0.00 0.00 0.00 3.01
463 464 8.992349 TGGTCTATAATGAAATCTCTCCAAAGA 58.008 33.333 0.00 0.00 0.00 2.52
464 465 9.050601 GTGGTCTATAATGAAATCTCTCCAAAG 57.949 37.037 0.00 0.00 0.00 2.77
465 466 8.548025 TGTGGTCTATAATGAAATCTCTCCAAA 58.452 33.333 0.00 0.00 0.00 3.28
466 467 8.089625 TGTGGTCTATAATGAAATCTCTCCAA 57.910 34.615 0.00 0.00 0.00 3.53
467 468 7.675161 TGTGGTCTATAATGAAATCTCTCCA 57.325 36.000 0.00 0.00 0.00 3.86
468 469 9.566432 AAATGTGGTCTATAATGAAATCTCTCC 57.434 33.333 0.00 0.00 0.00 3.71
473 474 9.455847 GCTTCAAATGTGGTCTATAATGAAATC 57.544 33.333 0.00 0.00 0.00 2.17
474 475 8.970020 TGCTTCAAATGTGGTCTATAATGAAAT 58.030 29.630 0.00 0.00 0.00 2.17
475 476 8.347004 TGCTTCAAATGTGGTCTATAATGAAA 57.653 30.769 0.00 0.00 0.00 2.69
476 477 7.936496 TGCTTCAAATGTGGTCTATAATGAA 57.064 32.000 0.00 0.00 0.00 2.57
477 478 7.936496 TTGCTTCAAATGTGGTCTATAATGA 57.064 32.000 0.00 0.00 0.00 2.57
478 479 8.984891 TTTTGCTTCAAATGTGGTCTATAATG 57.015 30.769 0.00 0.00 33.19 1.90
479 480 9.590451 CATTTTGCTTCAAATGTGGTCTATAAT 57.410 29.630 7.87 0.00 33.19 1.28
480 481 8.801299 TCATTTTGCTTCAAATGTGGTCTATAA 58.199 29.630 13.08 0.00 33.19 0.98
481 482 8.347004 TCATTTTGCTTCAAATGTGGTCTATA 57.653 30.769 13.08 0.00 33.19 1.31
482 483 7.039504 ACTCATTTTGCTTCAAATGTGGTCTAT 60.040 33.333 16.20 1.51 33.19 1.98
483 484 6.265196 ACTCATTTTGCTTCAAATGTGGTCTA 59.735 34.615 16.20 1.46 33.19 2.59
484 485 5.069516 ACTCATTTTGCTTCAAATGTGGTCT 59.930 36.000 16.20 1.97 33.19 3.85
485 486 5.176223 CACTCATTTTGCTTCAAATGTGGTC 59.824 40.000 16.20 0.00 33.19 4.02
486 487 5.051816 CACTCATTTTGCTTCAAATGTGGT 58.948 37.500 16.20 12.74 33.19 4.16
487 488 5.291178 TCACTCATTTTGCTTCAAATGTGG 58.709 37.500 16.20 12.36 33.19 4.17
488 489 6.831727 TTCACTCATTTTGCTTCAAATGTG 57.168 33.333 13.08 12.97 33.19 3.21
489 490 7.439381 AGATTCACTCATTTTGCTTCAAATGT 58.561 30.769 13.08 0.00 33.19 2.71
490 491 7.884816 AGATTCACTCATTTTGCTTCAAATG 57.115 32.000 9.18 9.18 33.19 2.32
491 492 8.579006 TGTAGATTCACTCATTTTGCTTCAAAT 58.421 29.630 0.00 0.00 33.19 2.32
492 493 7.862372 GTGTAGATTCACTCATTTTGCTTCAAA 59.138 33.333 0.00 0.00 35.68 2.69
493 494 7.229306 AGTGTAGATTCACTCATTTTGCTTCAA 59.771 33.333 0.00 0.00 44.07 2.69
494 495 6.712095 AGTGTAGATTCACTCATTTTGCTTCA 59.288 34.615 0.00 0.00 44.07 3.02
495 496 7.138692 AGTGTAGATTCACTCATTTTGCTTC 57.861 36.000 0.00 0.00 44.07 3.86
541 542 6.666678 AGATTCTATTATGGCCCACATATGG 58.333 40.000 7.80 0.00 46.81 2.74
542 543 7.571919 AGAGATTCTATTATGGCCCACATATG 58.428 38.462 0.00 0.00 41.49 1.78
543 544 7.761981 AGAGATTCTATTATGGCCCACATAT 57.238 36.000 0.00 0.00 41.49 1.78
544 545 7.678171 TGTAGAGATTCTATTATGGCCCACATA 59.322 37.037 0.00 0.00 40.23 2.29
545 546 6.501805 TGTAGAGATTCTATTATGGCCCACAT 59.498 38.462 0.00 0.00 36.10 3.21
546 547 5.843969 TGTAGAGATTCTATTATGGCCCACA 59.156 40.000 0.00 0.00 30.76 4.17
547 548 6.360370 TGTAGAGATTCTATTATGGCCCAC 57.640 41.667 0.00 0.00 30.76 4.61
548 549 7.901322 ACTATGTAGAGATTCTATTATGGCCCA 59.099 37.037 0.00 0.00 30.76 5.36
549 550 8.312669 ACTATGTAGAGATTCTATTATGGCCC 57.687 38.462 0.00 0.00 30.76 5.80
639 640 6.069847 ACTCCCTCTGTAATATTCGGGAAAAA 60.070 38.462 0.00 0.00 40.00 1.94
640 641 5.427481 ACTCCCTCTGTAATATTCGGGAAAA 59.573 40.000 0.00 0.00 40.00 2.29
641 642 4.966805 ACTCCCTCTGTAATATTCGGGAAA 59.033 41.667 0.00 0.00 40.00 3.13
642 643 4.553678 ACTCCCTCTGTAATATTCGGGAA 58.446 43.478 0.00 0.00 40.00 3.97
643 644 4.194678 ACTCCCTCTGTAATATTCGGGA 57.805 45.455 0.00 0.00 38.33 5.14
644 645 5.078256 AGTACTCCCTCTGTAATATTCGGG 58.922 45.833 0.00 0.00 0.00 5.14
645 646 7.941431 ATAGTACTCCCTCTGTAATATTCGG 57.059 40.000 0.00 0.00 30.23 4.30
646 647 9.445878 TGTATAGTACTCCCTCTGTAATATTCG 57.554 37.037 0.00 0.00 34.44 3.34
650 651 9.961264 CTGATGTATAGTACTCCCTCTGTAATA 57.039 37.037 0.00 0.00 0.00 0.98
651 652 7.394923 GCTGATGTATAGTACTCCCTCTGTAAT 59.605 40.741 0.00 0.00 0.00 1.89
652 653 6.715718 GCTGATGTATAGTACTCCCTCTGTAA 59.284 42.308 0.00 0.00 0.00 2.41
653 654 6.044520 AGCTGATGTATAGTACTCCCTCTGTA 59.955 42.308 0.00 0.00 0.00 2.74
654 655 5.074115 GCTGATGTATAGTACTCCCTCTGT 58.926 45.833 0.00 0.00 0.00 3.41
655 656 5.321102 AGCTGATGTATAGTACTCCCTCTG 58.679 45.833 0.00 0.00 0.00 3.35
656 657 5.592587 AGCTGATGTATAGTACTCCCTCT 57.407 43.478 0.00 0.00 0.00 3.69
657 658 6.041069 ACAAAGCTGATGTATAGTACTCCCTC 59.959 42.308 0.00 0.00 0.00 4.30
658 659 5.900123 ACAAAGCTGATGTATAGTACTCCCT 59.100 40.000 0.00 0.00 0.00 4.20
659 660 6.163135 ACAAAGCTGATGTATAGTACTCCC 57.837 41.667 0.00 0.00 0.00 4.30
660 661 7.868415 CCTAACAAAGCTGATGTATAGTACTCC 59.132 40.741 0.00 0.00 0.00 3.85
661 662 8.630917 TCCTAACAAAGCTGATGTATAGTACTC 58.369 37.037 0.00 0.00 0.00 2.59
662 663 8.534954 TCCTAACAAAGCTGATGTATAGTACT 57.465 34.615 0.00 0.00 0.00 2.73
663 664 9.765795 ATTCCTAACAAAGCTGATGTATAGTAC 57.234 33.333 5.89 0.00 0.00 2.73
674 675 9.508567 GCTCTAATTTTATTCCTAACAAAGCTG 57.491 33.333 0.00 0.00 0.00 4.24
675 676 9.243105 TGCTCTAATTTTATTCCTAACAAAGCT 57.757 29.630 0.00 0.00 0.00 3.74
676 677 9.290483 GTGCTCTAATTTTATTCCTAACAAAGC 57.710 33.333 0.00 0.00 0.00 3.51
761 774 5.081032 AGAGGAAGTACAACTGCTTCTAGT 58.919 41.667 0.00 0.00 38.32 2.57
1232 1256 2.592993 GGTCTAGCCTGGTGCACCA 61.593 63.158 35.49 35.49 44.83 4.17
1803 1882 1.228552 ACGAAGGGCTGCATGGTTT 60.229 52.632 0.50 0.00 0.00 3.27
2282 2390 6.233430 TGTACACGTAGTCTGAGACTTTAC 57.767 41.667 21.49 12.64 40.28 2.01
2484 2598 4.801330 TTGGAAGAGCACTCGAAGATAA 57.199 40.909 0.00 0.00 33.89 1.75
2501 2615 9.531942 GTAATCACATCAATTTGCATATTTGGA 57.468 29.630 0.00 0.00 0.00 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.