AutoCloner

Multiple sequence alignment - TraesCS4A01G106700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS4A01G106700	chr4A	100.000	5413	0	0	1	5413	121497792	121503204	0.000000e+00	9997
1	TraesCS4A01G106700	chr4A	96.354	192	5	2	1892	2082	683931361	683931551	1.130000e-81	315
2	TraesCS4A01G106700	chr4B	93.609	1502	66	15	407	1900	426114743	426113264	0.000000e+00	2215
3	TraesCS4A01G106700	chr4B	89.922	1538	98	28	3529	5038	426112007	426110499	0.000000e+00	1929
4	TraesCS4A01G106700	chr4B	89.015	1320	86	22	2075	3392	426113271	426112009	0.000000e+00	1580
5	TraesCS4A01G106700	chr4B	89.348	629	62	5	2570	3196	300054843	300054218	0.000000e+00	785
6	TraesCS4A01G106700	chr4B	90.315	444	26	7	2	428	426115205	426114762	2.830000e-157	566
7	TraesCS4A01G106700	chr4B	90.783	217	19	1	5041	5257	426110457	426110242	6.860000e-74	289
8	TraesCS4A01G106700	chr4B	93.782	193	10	2	1892	2083	667396711	667396902	6.860000e-74	289
9	TraesCS4A01G106700	chr4B	85.714	161	13	6	2081	2232	300055054	300054895	1.560000e-35	161
10	TraesCS4A01G106700	chr4B	91.262	103	9	0	3290	3392	300054058	300053956	2.030000e-29	141
11	TraesCS4A01G106700	chr4D	94.251	1235	34	14	680	1900	344117275	344116064	0.000000e+00	1853
12	TraesCS4A01G106700	chr4D	93.947	1173	56	13	3869	5036	344114495	344113333	0.000000e+00	1759
13	TraesCS4A01G106700	chr4D	90.473	1333	85	21	2075	3391	344116071	344114765	0.000000e+00	1720
14	TraesCS4A01G106700	chr4D	91.159	690	47	6	2	678	344118314	344117626	0.000000e+00	924
15	TraesCS4A01G106700	chr4D	96.552	174	6	0	1901	2074	497235520	497235693	6.860000e-74	289
16	TraesCS4A01G106700	chr4D	88.024	167	14	4	3675	3836	344114655	344114490	5.530000e-45	193
17	TraesCS4A01G106700	chr4D	93.077	130	9	0	5041	5170	344113297	344113168	1.990000e-44	191
18	TraesCS4A01G106700	chr4D	92.632	95	7	0	3437	3531	375135016	375134922	2.630000e-28	137
19	TraesCS4A01G106700	chr4D	91.667	96	8	0	3437	3532	494042374	494042469	3.400000e-27	134
20	TraesCS4A01G106700	chr2A	87.779	671	65	11	2570	3237	761160475	761161131	0.000000e+00	769
21	TraesCS4A01G106700	chr2A	88.462	286	26	7	2568	2850	197523447	197523166	6.720000e-89	339
22	TraesCS4A01G106700	chr2A	80.819	464	59	16	3529	3967	197516420	197515962	2.420000e-88	337
23	TraesCS4A01G106700	chr2A	89.916	238	23	1	2848	3085	197523136	197522900	6.810000e-79	305
24	TraesCS4A01G106700	chr2A	91.150	113	10	0	3280	3392	197516534	197516422	2.610000e-33	154
25	TraesCS4A01G106700	chr2A	91.262	103	9	0	3290	3392	761161261	761161363	2.030000e-29	141
26	TraesCS4A01G106700	chr2A	89.899	99	8	2	2135	2232	761160326	761160423	5.690000e-25	126
27	TraesCS4A01G106700	chr2A	90.476	84	8	0	1813	1896	197523970	197523887	1.590000e-20	111
28	TraesCS4A01G106700	chr6B	87.520	633	68	11	2568	3196	363766381	363767006	0.000000e+00	721
29	TraesCS4A01G106700	chr6B	90.787	445	21	11	592	1032	131278170	131278598	1.310000e-160	577
30	TraesCS4A01G106700	chr6B	80.720	472	60	18	3528	3973	363767265	363767731	6.720000e-89	339
31	TraesCS4A01G106700	chr6B	88.496	113	13	0	3280	3392	363767039	363767151	2.630000e-28	137
32	TraesCS4A01G106700	chr6B	91.566	83	6	1	1813	1894	363765855	363765937	4.430000e-21	113
33	TraesCS4A01G106700	chr2D	82.796	465	53	17	2081	2535	182385389	182384942	1.830000e-104	390
34	TraesCS4A01G106700	chr2D	90.526	285	23	4	2568	2850	182384952	182384670	1.840000e-99	374
35	TraesCS4A01G106700	chr2D	91.667	84	7	0	1813	1896	182385475	182385392	3.430000e-22	117
36	TraesCS4A01G106700	chr2B	82.227	467	55	18	2081	2535	238654749	238654299	1.420000e-100	377
37	TraesCS4A01G106700	chr2B	89.789	284	26	3	2568	2850	238654309	238654028	1.430000e-95	361
38	TraesCS4A01G106700	chr2B	93.158	190	13	0	1894	2083	184781943	184781754	4.130000e-71	279
39	TraesCS4A01G106700	chr2B	92.708	192	13	1	1897	2088	36413736	36413926	5.340000e-70	276
40	TraesCS4A01G106700	chr2B	88.119	202	15	1	3036	3237	238650335	238650143	1.170000e-56	231
41	TraesCS4A01G106700	chr2B	85.792	183	24	2	2849	3031	238653935	238653755	5.530000e-45	193
42	TraesCS4A01G106700	chr2B	90.210	143	14	0	3529	3671	238650033	238649891	2.570000e-43	187
43	TraesCS4A01G106700	chr3B	97.701	174	4	0	1900	2073	689492866	689492693	3.170000e-77	300
44	TraesCS4A01G106700	chr5A	94.652	187	10	0	1898	2084	604908094	604907908	1.910000e-74	291
45	TraesCS4A01G106700	chr5A	93.583	187	12	0	1898	2084	604942136	604941950	4.130000e-71	279
46	TraesCS4A01G106700	chr7B	92.746	193	12	2	1892	2083	632273970	632274161	1.480000e-70	278
47	TraesCS4A01G106700	chr7B	92.857	98	7	0	3438	3535	304527272	304527175	5.650000e-30	143
48	TraesCS4A01G106700	chrUn	91.919	99	7	1	3437	3534	2713991	2713893	2.630000e-28	137
49	TraesCS4A01G106700	chrUn	91.919	99	7	1	3437	3534	2717593	2717495	2.630000e-28	137
50	TraesCS4A01G106700	chrUn	91.919	99	7	1	3437	3534	2780471	2780373	2.630000e-28	137
51	TraesCS4A01G106700	chr1B	91.919	99	7	1	3437	3534	23636867	23636965	2.630000e-28	137
52	TraesCS4A01G106700	chr1B	92.632	95	7	0	3437	3531	572529361	572529455	2.630000e-28	137
53	TraesCS4A01G106700	chr5B	90.196	102	9	1	3437	3537	316712699	316712598	1.220000e-26	132

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS4A01G106700	chr4A	121497792	121503204	5412	False	9997.000000	9997	100.000000	1	5413	1	chr4A.!!$F1	5412
1	TraesCS4A01G106700	chr4B	426110242	426115205	4963	True	1315.800000	2215	90.728800	2	5257	5	chr4B.!!$R2	5255
2	TraesCS4A01G106700	chr4B	300053956	300055054	1098	True	362.333333	785	88.774667	2081	3392	3	chr4B.!!$R1	1311
3	TraesCS4A01G106700	chr4D	344113168	344118314	5146	True	1106.666667	1853	91.821833	2	5170	6	chr4D.!!$R2	5168
4	TraesCS4A01G106700	chr2A	761160326	761161363	1037	False	345.333333	769	89.646667	2135	3392	3	chr2A.!!$F1	1257
5	TraesCS4A01G106700	chr2A	197522900	197523970	1070	True	251.666667	339	89.618000	1813	3085	3	chr2A.!!$R2	1272
6	TraesCS4A01G106700	chr2A	197515962	197516534	572	True	245.500000	337	85.984500	3280	3967	2	chr2A.!!$R1	687
7	TraesCS4A01G106700	chr6B	363765855	363767731	1876	False	327.500000	721	87.075500	1813	3973	4	chr6B.!!$F2	2160
8	TraesCS4A01G106700	chr2D	182384670	182385475	805	True	293.666667	390	88.329667	1813	2850	3	chr2D.!!$R1	1037
9	TraesCS4A01G106700	chr2B	238649891	238654749	4858	True	269.800000	377	87.227400	2081	3671	5	chr2B.!!$R2	1590

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
370	373	1.080638	TGGTGACCCCTTATGCCTTT	58.919	50.0	0.0	0.00	3.11	F
1362	1776	0.539051	CCGTCTCCTTCAATCAGGCT	59.461	55.0	0.0	33.35	4.58	F
1984	2410	0.454196	AAAACAACCCACGTCAGCAC	59.546	50.0	0.0	0.00	4.40	F
1985	2411	0.678366	AAACAACCCACGTCAGCACA	60.678	50.0	0.0	0.00	4.57	F
3432	7504	0.472925	TGGGTCCCTGCTCTTGTACA	60.473	55.0	10.0	0.00	2.90	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1495	1909	0.104934	ACGGGGAGGGAGCAGATAAT	60.105	55.000	0.00	0.00	0.00	1.28	R
2345	2781	3.006940	TCGCAAGCGGATCAACTTAATT	58.993	40.909	14.98	0.00	40.25	1.40	R
3428	7500	0.179081	GGACGAAGGGAGCCATGTAC	60.179	60.000	0.00	0.00	0.00	2.90	R
3434	7506	0.323451	ATTTTGGGACGAAGGGAGCC	60.323	55.000	0.00	0.00	0.00	4.70	R
5210	9473	0.459489	ATCGACCTGAGCTCTGCTTC	59.541	55.000	16.19	11.93	39.88	3.86	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
196	198	5.012893	CCCTTATGCCTTATCTTCCAATCC	58.987	45.833	0.00	0.00	0.00	3.01
198	200	6.070656	CCTTATGCCTTATCTTCCAATCCAA	58.929	40.000	0.00	0.00	0.00	3.53
242	244	2.875933	CCTTAAACTCAACTCGGCAACA	59.124	45.455	0.00	0.00	0.00	3.33
257	259	2.097142	GGCAACAGATCACAGCTCATTC	59.903	50.000	0.00	0.00	0.00	2.67
370	373	1.080638	TGGTGACCCCTTATGCCTTT	58.919	50.000	0.00	0.00	0.00	3.11
372	375	2.650322	TGGTGACCCCTTATGCCTTTTA	59.350	45.455	0.00	0.00	0.00	1.52
374	377	3.889538	GGTGACCCCTTATGCCTTTTATC	59.110	47.826	0.00	0.00	0.00	1.75
412	430	4.142116	TGTCTTAAACTCAACTCGGTGACA	60.142	41.667	0.00	0.00	0.00	3.58
442	500	5.514559	CAGCTCATTTATATCTCATCGACCG	59.485	44.000	0.00	0.00	0.00	4.79
443	501	4.800993	GCTCATTTATATCTCATCGACCGG	59.199	45.833	0.00	0.00	0.00	5.28
464	522	4.578516	CGGATGTCAGTAATTTTGGGCATA	59.421	41.667	0.00	0.00	0.00	3.14
508	566	5.121768	CGGTTAGTAGCTAAAAAGCATGTGT	59.878	40.000	15.07	0.00	37.25	3.72
512	570	6.969828	AGTAGCTAAAAAGCATGTGTAGAC	57.030	37.500	0.00	0.00	37.25	2.59
702	1110	8.184192	GCATAGTAATTAACATTGCACAAGACT	58.816	33.333	0.00	0.00	37.86	3.24
705	1113	8.848474	AGTAATTAACATTGCACAAGACTACT	57.152	30.769	0.00	0.00	0.00	2.57
706	1114	8.721478	AGTAATTAACATTGCACAAGACTACTG	58.279	33.333	0.00	0.00	0.00	2.74
784	1194	4.614993	CGAAGCAAATTTAGCTCGGGAAAA	60.615	41.667	13.22	0.00	42.53	2.29
837	1251	1.153489	CTGCATCCACCGACAGAGG	60.153	63.158	0.00	0.00	31.67	3.69
875	1289	5.105228	CCAATTCCCATAAACACAAGCTCAT	60.105	40.000	0.00	0.00	0.00	2.90
1356	1770	1.201429	ACCTGCCCGTCTCCTTCAAT	61.201	55.000	0.00	0.00	0.00	2.57
1362	1776	0.539051	CCGTCTCCTTCAATCAGGCT	59.461	55.000	0.00	0.00	33.35	4.58
1495	1909	3.277652	GCCAGCGGCGTAAGTTATA	57.722	52.632	9.37	0.00	39.62	0.98
1496	1910	1.792006	GCCAGCGGCGTAAGTTATAT	58.208	50.000	9.37	0.00	39.62	0.86
1499	1913	3.930848	GCCAGCGGCGTAAGTTATATTAT	59.069	43.478	9.37	0.00	39.62	1.28
1510	1924	7.259161	CGTAAGTTATATTATCTGCTCCCTCC	58.741	42.308	0.00	0.00	0.00	4.30
1516	1930	2.658321	TATCTGCTCCCTCCCCGTCC	62.658	65.000	0.00	0.00	0.00	4.79
1635	2049	0.473501	ATGGGGAGAGGAGGATCTGC	60.474	60.000	0.00	0.00	36.96	4.26
1645	2059	2.703007	AGGAGGATCTGCCACAATAGTC	59.297	50.000	7.07	0.00	40.02	2.59
1674	2088	4.650972	ACTTGGACTAAAATGGTAGGCA	57.349	40.909	0.00	0.00	29.81	4.75
1713	2127	1.464429	GCGTGCTGTCTGATACGTCG	61.464	60.000	0.00	0.00	38.67	5.12
1726	2140	2.712057	TACGTCGACAACTTTCTCCC	57.288	50.000	17.16	0.00	0.00	4.30
1748	2162	4.299485	CCTAGGGAGAACTTTAGGGATGT	58.701	47.826	0.00	0.00	31.11	3.06
1758	2172	3.245264	ACTTTAGGGATGTTGAGTTGGGG	60.245	47.826	0.00	0.00	0.00	4.96
1796	2220	2.373169	TCATGTCCAGGCATCCTAATCC	59.627	50.000	0.00	0.00	29.64	3.01
1897	2323	5.237236	AGTTCGGGTTCCTGAGAAAATAA	57.763	39.130	0.51	0.00	32.58	1.40
1898	2324	5.627135	AGTTCGGGTTCCTGAGAAAATAAA	58.373	37.500	0.51	0.00	32.58	1.40
1899	2325	6.066032	AGTTCGGGTTCCTGAGAAAATAAAA	58.934	36.000	0.51	0.00	32.58	1.52
1900	2326	6.206829	AGTTCGGGTTCCTGAGAAAATAAAAG	59.793	38.462	0.51	0.00	32.58	2.27
1901	2327	5.007682	TCGGGTTCCTGAGAAAATAAAAGG	58.992	41.667	0.00	0.00	32.58	3.11
1902	2328	4.157840	CGGGTTCCTGAGAAAATAAAAGGG	59.842	45.833	0.00	0.00	32.58	3.95
1903	2329	5.330233	GGGTTCCTGAGAAAATAAAAGGGA	58.670	41.667	0.00	0.00	32.58	4.20
1904	2330	5.419155	GGGTTCCTGAGAAAATAAAAGGGAG	59.581	44.000	0.00	0.00	32.58	4.30
1905	2331	6.010850	GGTTCCTGAGAAAATAAAAGGGAGT	58.989	40.000	0.00	0.00	32.58	3.85
1906	2332	7.173032	GGTTCCTGAGAAAATAAAAGGGAGTA	58.827	38.462	0.00	0.00	32.58	2.59
1907	2333	7.120873	GGTTCCTGAGAAAATAAAAGGGAGTAC	59.879	40.741	0.00	0.00	32.58	2.73
1908	2334	6.718294	TCCTGAGAAAATAAAAGGGAGTACC	58.282	40.000	0.00	0.00	40.67	3.34
1923	2349	5.934402	GGAGTACCCAGAACTCATCTAAA	57.066	43.478	5.67	0.00	44.25	1.85
1924	2350	6.487299	GGAGTACCCAGAACTCATCTAAAT	57.513	41.667	5.67	0.00	44.25	1.40
1925	2351	6.284459	GGAGTACCCAGAACTCATCTAAATG	58.716	44.000	5.67	0.00	44.25	2.32
1926	2352	6.240549	AGTACCCAGAACTCATCTAAATGG	57.759	41.667	0.00	0.00	36.32	3.16
1927	2353	4.510167	ACCCAGAACTCATCTAAATGGG	57.490	45.455	5.82	5.82	41.42	4.00
1928	2354	4.111577	ACCCAGAACTCATCTAAATGGGA	58.888	43.478	14.05	0.00	39.13	4.37
1929	2355	4.728860	ACCCAGAACTCATCTAAATGGGAT	59.271	41.667	14.05	0.00	39.13	3.85
1930	2356	5.911178	ACCCAGAACTCATCTAAATGGGATA	59.089	40.000	14.05	0.00	39.13	2.59
1931	2357	6.564152	ACCCAGAACTCATCTAAATGGGATAT	59.436	38.462	14.05	0.00	39.13	1.63
1932	2358	7.739444	ACCCAGAACTCATCTAAATGGGATATA	59.261	37.037	14.05	0.00	39.13	0.86
1933	2359	8.605947	CCCAGAACTCATCTAAATGGGATATAA	58.394	37.037	0.92	0.00	39.13	0.98
1947	2373	9.659135	AAATGGGATATAATTTGGTCTCATTCA	57.341	29.630	10.37	0.00	40.02	2.57
1948	2374	8.641498	ATGGGATATAATTTGGTCTCATTCAC	57.359	34.615	0.00	0.00	27.57	3.18
1949	2375	7.004086	TGGGATATAATTTGGTCTCATTCACC	58.996	38.462	0.00	0.00	0.00	4.02
1950	2376	7.147141	TGGGATATAATTTGGTCTCATTCACCT	60.147	37.037	0.00	0.00	34.66	4.00
1951	2377	7.175641	GGGATATAATTTGGTCTCATTCACCTG	59.824	40.741	0.00	0.00	34.66	4.00
1952	2378	7.175641	GGATATAATTTGGTCTCATTCACCTGG	59.824	40.741	0.00	0.00	34.66	4.45
1953	2379	4.387026	AATTTGGTCTCATTCACCTGGA	57.613	40.909	0.00	0.00	34.66	3.86
1954	2380	3.874383	TTTGGTCTCATTCACCTGGAA	57.126	42.857	0.00	0.00	40.46	3.53
1955	2381	3.874383	TTGGTCTCATTCACCTGGAAA	57.126	42.857	0.00	0.00	39.39	3.13
1956	2382	4.387026	TTGGTCTCATTCACCTGGAAAT	57.613	40.909	0.00	0.00	39.39	2.17
1957	2383	3.955471	TGGTCTCATTCACCTGGAAATC	58.045	45.455	0.00	0.00	39.39	2.17
1958	2384	3.330405	TGGTCTCATTCACCTGGAAATCA	59.670	43.478	0.00	0.00	39.39	2.57
1959	2385	4.202556	TGGTCTCATTCACCTGGAAATCAA	60.203	41.667	0.00	0.00	39.39	2.57
1960	2386	4.397417	GGTCTCATTCACCTGGAAATCAAG	59.603	45.833	0.00	0.86	39.39	3.02
1961	2387	5.248640	GTCTCATTCACCTGGAAATCAAGA	58.751	41.667	0.00	3.05	39.39	3.02
1962	2388	5.707298	GTCTCATTCACCTGGAAATCAAGAA	59.293	40.000	0.00	0.00	39.39	2.52
1963	2389	5.707298	TCTCATTCACCTGGAAATCAAGAAC	59.293	40.000	0.00	0.00	39.39	3.01
1964	2390	5.384336	TCATTCACCTGGAAATCAAGAACA	58.616	37.500	0.00	0.00	39.39	3.18
1965	2391	5.832595	TCATTCACCTGGAAATCAAGAACAA	59.167	36.000	0.00	0.00	39.39	2.83
1966	2392	6.323482	TCATTCACCTGGAAATCAAGAACAAA	59.677	34.615	0.00	0.00	39.39	2.83
1967	2393	6.537453	TTCACCTGGAAATCAAGAACAAAA	57.463	33.333	0.00	0.00	30.98	2.44
1968	2394	6.537453	TCACCTGGAAATCAAGAACAAAAA	57.463	33.333	0.00	0.00	0.00	1.94
1969	2395	6.337356	TCACCTGGAAATCAAGAACAAAAAC	58.663	36.000	0.00	0.00	0.00	2.43
1970	2396	6.071108	TCACCTGGAAATCAAGAACAAAAACA	60.071	34.615	0.00	0.00	0.00	2.83
1971	2397	6.593382	CACCTGGAAATCAAGAACAAAAACAA	59.407	34.615	0.00	0.00	0.00	2.83
1972	2398	6.593770	ACCTGGAAATCAAGAACAAAAACAAC	59.406	34.615	0.00	0.00	0.00	3.32
1973	2399	6.037062	CCTGGAAATCAAGAACAAAAACAACC	59.963	38.462	0.00	0.00	0.00	3.77
1974	2400	5.877564	TGGAAATCAAGAACAAAAACAACCC	59.122	36.000	0.00	0.00	0.00	4.11
1975	2401	5.877564	GGAAATCAAGAACAAAAACAACCCA	59.122	36.000	0.00	0.00	0.00	4.51
1976	2402	6.183360	GGAAATCAAGAACAAAAACAACCCAC	60.183	38.462	0.00	0.00	0.00	4.61
1977	2403	3.839293	TCAAGAACAAAAACAACCCACG	58.161	40.909	0.00	0.00	0.00	4.94
1978	2404	3.256136	TCAAGAACAAAAACAACCCACGT	59.744	39.130	0.00	0.00	0.00	4.49
1979	2405	3.497297	AGAACAAAAACAACCCACGTC	57.503	42.857	0.00	0.00	0.00	4.34
1980	2406	2.820787	AGAACAAAAACAACCCACGTCA	59.179	40.909	0.00	0.00	0.00	4.35
1981	2407	2.931512	ACAAAAACAACCCACGTCAG	57.068	45.000	0.00	0.00	0.00	3.51
1982	2408	1.135228	ACAAAAACAACCCACGTCAGC	60.135	47.619	0.00	0.00	0.00	4.26
1983	2409	1.135257	CAAAAACAACCCACGTCAGCA	60.135	47.619	0.00	0.00	0.00	4.41
1984	2410	0.454196	AAAACAACCCACGTCAGCAC	59.546	50.000	0.00	0.00	0.00	4.40
1985	2411	0.678366	AAACAACCCACGTCAGCACA	60.678	50.000	0.00	0.00	0.00	4.57
1986	2412	1.373590	AACAACCCACGTCAGCACAC	61.374	55.000	0.00	0.00	0.00	3.82
1987	2413	1.817520	CAACCCACGTCAGCACACA	60.818	57.895	0.00	0.00	0.00	3.72
1988	2414	1.817941	AACCCACGTCAGCACACAC	60.818	57.895	0.00	0.00	0.00	3.82
1989	2415	3.337889	CCCACGTCAGCACACACG	61.338	66.667	0.00	0.00	41.90	4.49
1990	2416	4.000557	CCACGTCAGCACACACGC	62.001	66.667	0.00	0.00	39.73	5.34
1991	2417	3.261216	CACGTCAGCACACACGCA	61.261	61.111	0.00	0.00	39.73	5.24
1992	2418	2.280119	ACGTCAGCACACACGCAT	60.280	55.556	0.00	0.00	39.73	4.73
1993	2419	2.310233	ACGTCAGCACACACGCATC	61.310	57.895	0.00	0.00	39.73	3.91
1994	2420	2.023771	CGTCAGCACACACGCATCT	61.024	57.895	0.00	0.00	0.00	2.90
1995	2421	1.560004	CGTCAGCACACACGCATCTT	61.560	55.000	0.00	0.00	0.00	2.40
1996	2422	1.428448	GTCAGCACACACGCATCTTA	58.572	50.000	0.00	0.00	0.00	2.10
1997	2423	2.002586	GTCAGCACACACGCATCTTAT	58.997	47.619	0.00	0.00	0.00	1.73
1998	2424	3.186909	GTCAGCACACACGCATCTTATA	58.813	45.455	0.00	0.00	0.00	0.98
1999	2425	3.243877	GTCAGCACACACGCATCTTATAG	59.756	47.826	0.00	0.00	0.00	1.31
2000	2426	2.033407	CAGCACACACGCATCTTATAGC	60.033	50.000	0.00	0.00	0.00	2.97
2001	2427	1.933181	GCACACACGCATCTTATAGCA	59.067	47.619	0.00	0.00	0.00	3.49
2002	2428	2.545526	GCACACACGCATCTTATAGCAT	59.454	45.455	0.00	0.00	0.00	3.79
2003	2429	3.363378	GCACACACGCATCTTATAGCATC	60.363	47.826	0.00	0.00	0.00	3.91
2004	2430	3.803778	CACACACGCATCTTATAGCATCA	59.196	43.478	0.00	0.00	0.00	3.07
2005	2431	3.804325	ACACACGCATCTTATAGCATCAC	59.196	43.478	0.00	0.00	0.00	3.06
2006	2432	3.803778	CACACGCATCTTATAGCATCACA	59.196	43.478	0.00	0.00	0.00	3.58
2007	2433	4.450080	CACACGCATCTTATAGCATCACAT	59.550	41.667	0.00	0.00	0.00	3.21
2008	2434	4.687948	ACACGCATCTTATAGCATCACATC	59.312	41.667	0.00	0.00	0.00	3.06
2009	2435	4.092529	CACGCATCTTATAGCATCACATCC	59.907	45.833	0.00	0.00	0.00	3.51
2010	2436	4.248058	CGCATCTTATAGCATCACATCCA	58.752	43.478	0.00	0.00	0.00	3.41
2011	2437	4.692155	CGCATCTTATAGCATCACATCCAA	59.308	41.667	0.00	0.00	0.00	3.53
2012	2438	5.353400	CGCATCTTATAGCATCACATCCAAT	59.647	40.000	0.00	0.00	0.00	3.16
2013	2439	6.552629	GCATCTTATAGCATCACATCCAATG	58.447	40.000	0.00	0.00	0.00	2.82
2014	2440	6.404403	GCATCTTATAGCATCACATCCAATGG	60.404	42.308	0.00	0.00	33.60	3.16
2015	2441	5.005740	TCTTATAGCATCACATCCAATGGC	58.994	41.667	0.00	0.00	33.60	4.40
2016	2442	3.520691	ATAGCATCACATCCAATGGCT	57.479	42.857	0.00	0.00	33.60	4.75
2017	2443	4.645863	ATAGCATCACATCCAATGGCTA	57.354	40.909	0.00	0.00	33.60	3.93
2018	2444	3.520691	AGCATCACATCCAATGGCTAT	57.479	42.857	0.00	0.00	33.60	2.97
2019	2445	3.154710	AGCATCACATCCAATGGCTATG	58.845	45.455	0.00	0.00	33.60	2.23
2020	2446	3.151554	GCATCACATCCAATGGCTATGA	58.848	45.455	7.82	0.00	33.60	2.15
2021	2447	3.570975	GCATCACATCCAATGGCTATGAA	59.429	43.478	7.82	0.00	33.60	2.57
2022	2448	4.038282	GCATCACATCCAATGGCTATGAAA	59.962	41.667	7.82	0.00	33.60	2.69
2023	2449	5.769367	CATCACATCCAATGGCTATGAAAG	58.231	41.667	7.82	0.00	33.60	2.62
2024	2450	4.209538	TCACATCCAATGGCTATGAAAGG	58.790	43.478	7.82	0.00	33.60	3.11
2025	2451	3.956199	CACATCCAATGGCTATGAAAGGT	59.044	43.478	7.82	0.00	33.60	3.50
2026	2452	3.956199	ACATCCAATGGCTATGAAAGGTG	59.044	43.478	7.82	0.00	33.60	4.00
2027	2453	4.209538	CATCCAATGGCTATGAAAGGTGA	58.790	43.478	0.00	0.00	0.00	4.02
2028	2454	4.314522	TCCAATGGCTATGAAAGGTGAA	57.685	40.909	0.00	0.00	0.00	3.18
2029	2455	4.870636	TCCAATGGCTATGAAAGGTGAAT	58.129	39.130	0.00	0.00	0.00	2.57
2030	2456	4.646040	TCCAATGGCTATGAAAGGTGAATG	59.354	41.667	0.00	0.00	0.00	2.67
2031	2457	4.646040	CCAATGGCTATGAAAGGTGAATGA	59.354	41.667	0.00	0.00	0.00	2.57
2032	2458	5.221185	CCAATGGCTATGAAAGGTGAATGAG	60.221	44.000	0.00	0.00	0.00	2.90
2033	2459	4.842531	TGGCTATGAAAGGTGAATGAGA	57.157	40.909	0.00	0.00	0.00	3.27
2034	2460	4.517285	TGGCTATGAAAGGTGAATGAGAC	58.483	43.478	0.00	0.00	0.00	3.36
2035	2461	3.879892	GGCTATGAAAGGTGAATGAGACC	59.120	47.826	0.00	0.00	0.00	3.85
2036	2462	4.517285	GCTATGAAAGGTGAATGAGACCA	58.483	43.478	0.00	0.00	35.76	4.02
2037	2463	4.943705	GCTATGAAAGGTGAATGAGACCAA	59.056	41.667	0.00	0.00	35.76	3.67
2038	2464	5.415701	GCTATGAAAGGTGAATGAGACCAAA	59.584	40.000	0.00	0.00	35.76	3.28
2039	2465	6.096001	GCTATGAAAGGTGAATGAGACCAAAT	59.904	38.462	0.00	0.00	35.76	2.32
2040	2466	6.923199	ATGAAAGGTGAATGAGACCAAATT	57.077	33.333	0.00	0.00	35.76	1.82
2041	2467	9.177608	CTATGAAAGGTGAATGAGACCAAATTA	57.822	33.333	0.00	0.00	35.76	1.40
2042	2468	8.599624	ATGAAAGGTGAATGAGACCAAATTAT	57.400	30.769	0.00	0.00	35.76	1.28
2043	2469	9.699410	ATGAAAGGTGAATGAGACCAAATTATA	57.301	29.630	0.00	0.00	35.76	0.98
2044	2470	9.699410	TGAAAGGTGAATGAGACCAAATTATAT	57.301	29.630	0.00	0.00	35.76	0.86
2046	2472	9.927081	AAAGGTGAATGAGACCAAATTATATCT	57.073	29.630	0.00	0.00	35.76	1.98
2047	2473	9.566432	AAGGTGAATGAGACCAAATTATATCTC	57.434	33.333	0.00	6.03	38.46	2.75
2054	2480	8.496534	TGAGACCAAATTATATCTCATCTGGA	57.503	34.615	10.05	0.00	41.99	3.86
2055	2481	9.109246	TGAGACCAAATTATATCTCATCTGGAT	57.891	33.333	10.05	0.00	41.99	3.41
2056	2482	9.381033	GAGACCAAATTATATCTCATCTGGATG	57.619	37.037	4.36	4.36	37.99	3.51
2057	2483	9.109246	AGACCAAATTATATCTCATCTGGATGA	57.891	33.333	12.01	12.01	44.83	2.92
2068	2494	5.682234	TCATCTGGATGAGTTCTAGCAAA	57.318	39.130	8.96	0.00	42.42	3.68
2069	2495	6.053632	TCATCTGGATGAGTTCTAGCAAAA	57.946	37.500	8.96	0.00	42.42	2.44
2070	2496	5.877012	TCATCTGGATGAGTTCTAGCAAAAC	59.123	40.000	8.96	0.00	42.42	2.43
2071	2497	5.489792	TCTGGATGAGTTCTAGCAAAACT	57.510	39.130	0.00	0.00	39.61	2.66
2072	2498	5.240891	TCTGGATGAGTTCTAGCAAAACTG	58.759	41.667	0.32	0.00	37.10	3.16
2073	2499	5.012046	TCTGGATGAGTTCTAGCAAAACTGA	59.988	40.000	0.32	0.00	37.10	3.41
2074	2500	5.620206	TGGATGAGTTCTAGCAAAACTGAA	58.380	37.500	0.32	0.00	37.10	3.02
2075	2501	6.061441	TGGATGAGTTCTAGCAAAACTGAAA	58.939	36.000	0.32	0.00	37.10	2.69
2076	2502	6.545666	TGGATGAGTTCTAGCAAAACTGAAAA	59.454	34.615	0.32	0.00	37.10	2.29
2077	2503	7.231317	TGGATGAGTTCTAGCAAAACTGAAAAT	59.769	33.333	0.32	0.00	37.10	1.82
2078	2504	8.730680	GGATGAGTTCTAGCAAAACTGAAAATA	58.269	33.333	0.32	0.00	37.10	1.40
2218	2653	8.533569	TTATAAGATTGGAGATGGAAAAACCC	57.466	34.615	0.00	0.00	38.00	4.11
2222	2657	5.846164	AGATTGGAGATGGAAAAACCCTTTT	59.154	36.000	0.00	0.00	37.46	2.27
2228	2663	7.092846	TGGAGATGGAAAAACCCTTTTGTTTTA	60.093	33.333	2.67	0.00	45.18	1.52
2318	2754	4.741928	ATTTGTCCCTTAGACCTTTGGT	57.258	40.909	0.00	0.00	45.68	3.67
2320	2756	4.529716	TTGTCCCTTAGACCTTTGGTTT	57.470	40.909	0.00	0.00	45.68	3.27
2322	2758	4.211920	TGTCCCTTAGACCTTTGGTTTTG	58.788	43.478	0.00	0.00	45.68	2.44
2326	2762	5.773176	TCCCTTAGACCTTTGGTTTTGAATC	59.227	40.000	0.00	0.00	35.25	2.52
2328	2764	6.447162	CCTTAGACCTTTGGTTTTGAATCAC	58.553	40.000	0.00	0.00	35.25	3.06
2329	2765	6.040391	CCTTAGACCTTTGGTTTTGAATCACA	59.960	38.462	0.00	0.00	35.25	3.58
2330	2766	5.930837	AGACCTTTGGTTTTGAATCACAA	57.069	34.783	0.00	0.00	35.25	3.33
2331	2767	5.906073	AGACCTTTGGTTTTGAATCACAAG	58.094	37.500	0.00	0.00	36.48	3.16
2333	2769	6.154363	AGACCTTTGGTTTTGAATCACAAGAA	59.846	34.615	0.00	0.00	36.48	2.52
2334	2770	6.706295	ACCTTTGGTTTTGAATCACAAGAAA	58.294	32.000	0.00	0.00	39.77	2.52
2335	2771	7.337938	ACCTTTGGTTTTGAATCACAAGAAAT	58.662	30.769	0.00	0.00	39.77	2.17
2336	2772	7.828717	ACCTTTGGTTTTGAATCACAAGAAATT	59.171	29.630	0.00	0.00	39.77	1.82
2337	2773	9.323985	CCTTTGGTTTTGAATCACAAGAAATTA	57.676	29.630	0.00	0.00	39.77	1.40
2339	2775	9.883142	TTTGGTTTTGAATCACAAGAAATTACT	57.117	25.926	0.00	0.00	39.77	2.24
2340	2776	9.883142	TTGGTTTTGAATCACAAGAAATTACTT	57.117	25.926	0.00	0.00	39.77	2.24
2376	2812	3.818787	GCTTGCGATGGGTGCTGG	61.819	66.667	0.00	0.00	0.00	4.85
2474	2910	8.562892	ACATTTAGTAGATTATGACTTGCATGC	58.437	33.333	11.82	11.82	37.87	4.06
2518	2955	4.877823	TGTTGCTATTCTTGCAGTCTATGG	59.122	41.667	0.00	0.00	41.71	2.74
2526	2963	2.755952	TGCAGTCTATGGGAGAGCTA	57.244	50.000	0.00	0.00	33.72	3.32
2674	3112	4.276926	GTGTTGCAAGGAATTCTTCTGTCT	59.723	41.667	0.00	0.00	32.41	3.41
2712	3150	3.731652	TTTTCTCTGCATTTGTGTGGG	57.268	42.857	0.00	0.00	0.00	4.61
2796	3238	9.785982	ATAGGAAGCTTCTAGGATTTGTATTTC	57.214	33.333	25.05	3.49	0.00	2.17
2798	3241	8.993424	AGGAAGCTTCTAGGATTTGTATTTCTA	58.007	33.333	25.05	0.00	0.00	2.10
2818	3262	8.612486	TTTCTAGGTATATTCTGGGTGTTGTA	57.388	34.615	0.00	0.00	0.00	2.41
2822	3266	6.827727	AGGTATATTCTGGGTGTTGTATGTC	58.172	40.000	0.00	0.00	0.00	3.06
2869	3406	7.595819	AGGTATATCTTGACTCTTCCTTCTG	57.404	40.000	0.00	0.00	0.00	3.02
2905	3442	6.053632	TCTTGACTCTTGATTATTCTGCCA	57.946	37.500	0.00	0.00	0.00	4.92
3034	6986	3.181510	GCGTTACAATAGAACTGGCCAAG	60.182	47.826	7.01	3.48	0.00	3.61
3153	7105	3.682696	TGACTCTACAGGTACGTCATGT	58.317	45.455	0.00	0.37	43.61	3.21
3227	7179	2.615447	GAGCATAGCTTAGCATGTTGCA	59.385	45.455	17.76	0.00	42.54	4.08
3243	7196	8.243289	GCATGTTGCACAAGAAGTTATTTTAT	57.757	30.769	0.00	0.00	44.26	1.40
3303	7375	8.522830	ACCTACCACATTGTAGATTTGATTTTG	58.477	33.333	0.00	0.00	40.56	2.44
3420	7492	7.074653	TCTATAAAGTTGATACATGGGTCCC	57.925	40.000	0.00	0.00	0.00	4.46
3421	7493	5.994416	ATAAAGTTGATACATGGGTCCCT	57.006	39.130	10.00	0.00	0.00	4.20
3422	7494	3.652057	AAGTTGATACATGGGTCCCTG	57.348	47.619	10.00	7.60	0.00	4.45
3423	7495	1.212935	AGTTGATACATGGGTCCCTGC	59.787	52.381	10.00	0.00	0.00	4.85
3424	7496	1.212935	GTTGATACATGGGTCCCTGCT	59.787	52.381	10.00	0.00	0.00	4.24
3425	7497	1.131638	TGATACATGGGTCCCTGCTC	58.868	55.000	10.00	6.54	0.00	4.26
3426	7498	1.344393	TGATACATGGGTCCCTGCTCT	60.344	52.381	10.00	0.00	0.00	4.09
3427	7499	1.771255	GATACATGGGTCCCTGCTCTT	59.229	52.381	10.00	0.00	0.00	2.85
3428	7500	0.911769	TACATGGGTCCCTGCTCTTG	59.088	55.000	10.00	0.23	0.00	3.02
3429	7501	1.136329	ACATGGGTCCCTGCTCTTGT	61.136	55.000	10.00	0.85	0.00	3.16
3430	7502	0.911769	CATGGGTCCCTGCTCTTGTA	59.088	55.000	10.00	0.00	0.00	2.41
3431	7503	0.912486	ATGGGTCCCTGCTCTTGTAC	59.088	55.000	10.00	0.00	0.00	2.90
3432	7504	0.472925	TGGGTCCCTGCTCTTGTACA	60.473	55.000	10.00	0.00	0.00	2.90
3433	7505	0.912486	GGGTCCCTGCTCTTGTACAT	59.088	55.000	0.00	0.00	0.00	2.29
3434	7506	1.407437	GGGTCCCTGCTCTTGTACATG	60.407	57.143	0.00	0.00	0.00	3.21
3435	7507	1.407437	GGTCCCTGCTCTTGTACATGG	60.407	57.143	8.74	0.00	0.00	3.66
3436	7508	0.253044	TCCCTGCTCTTGTACATGGC	59.747	55.000	8.74	10.84	0.00	4.40
3437	7509	0.254178	CCCTGCTCTTGTACATGGCT	59.746	55.000	17.11	0.00	0.00	4.75
3438	7510	1.661341	CCTGCTCTTGTACATGGCTC	58.339	55.000	17.11	6.42	0.00	4.70
3439	7511	1.661341	CTGCTCTTGTACATGGCTCC	58.339	55.000	17.11	4.11	0.00	4.70
3440	7512	0.253044	TGCTCTTGTACATGGCTCCC	59.747	55.000	17.11	0.00	0.00	4.30
3441	7513	0.543749	GCTCTTGTACATGGCTCCCT	59.456	55.000	8.74	0.00	0.00	4.20
3442	7514	1.065126	GCTCTTGTACATGGCTCCCTT	60.065	52.381	8.74	0.00	0.00	3.95
3443	7515	2.911484	CTCTTGTACATGGCTCCCTTC	58.089	52.381	8.74	0.00	0.00	3.46
3444	7516	1.207089	TCTTGTACATGGCTCCCTTCG	59.793	52.381	8.74	0.00	0.00	3.79
3445	7517	0.981183	TTGTACATGGCTCCCTTCGT	59.019	50.000	0.00	0.00	0.00	3.85
3446	7518	0.535335	TGTACATGGCTCCCTTCGTC	59.465	55.000	0.00	0.00	0.00	4.20
3447	7519	0.179081	GTACATGGCTCCCTTCGTCC	60.179	60.000	0.00	0.00	0.00	4.79
3448	7520	1.335132	TACATGGCTCCCTTCGTCCC	61.335	60.000	0.00	0.00	0.00	4.46
3449	7521	2.285368	ATGGCTCCCTTCGTCCCA	60.285	61.111	0.00	0.00	0.00	4.37
3450	7522	1.923395	ATGGCTCCCTTCGTCCCAA	60.923	57.895	0.00	0.00	0.00	4.12
3451	7523	1.497309	ATGGCTCCCTTCGTCCCAAA	61.497	55.000	0.00	0.00	0.00	3.28
3452	7524	1.074248	GGCTCCCTTCGTCCCAAAA	59.926	57.895	0.00	0.00	0.00	2.44
3453	7525	0.323451	GGCTCCCTTCGTCCCAAAAT	60.323	55.000	0.00	0.00	0.00	1.82
3454	7526	1.064979	GGCTCCCTTCGTCCCAAAATA	60.065	52.381	0.00	0.00	0.00	1.40
3455	7527	2.619590	GGCTCCCTTCGTCCCAAAATAA	60.620	50.000	0.00	0.00	0.00	1.40
3456	7528	2.683362	GCTCCCTTCGTCCCAAAATAAG	59.317	50.000	0.00	0.00	0.00	1.73
3457	7529	3.872630	GCTCCCTTCGTCCCAAAATAAGT	60.873	47.826	0.00	0.00	0.00	2.24
3458	7530	3.681593	TCCCTTCGTCCCAAAATAAGTG	58.318	45.455	0.00	0.00	0.00	3.16
3459	7531	3.073356	TCCCTTCGTCCCAAAATAAGTGT	59.927	43.478	0.00	0.00	0.00	3.55
3460	7532	3.439129	CCCTTCGTCCCAAAATAAGTGTC	59.561	47.826	0.00	0.00	0.00	3.67
3461	7533	4.324267	CCTTCGTCCCAAAATAAGTGTCT	58.676	43.478	0.00	0.00	0.00	3.41
3462	7534	4.392138	CCTTCGTCCCAAAATAAGTGTCTC	59.608	45.833	0.00	0.00	0.00	3.36
3463	7535	4.610605	TCGTCCCAAAATAAGTGTCTCA	57.389	40.909	0.00	0.00	0.00	3.27
3464	7536	4.963373	TCGTCCCAAAATAAGTGTCTCAA	58.037	39.130	0.00	0.00	0.00	3.02
3465	7537	4.753107	TCGTCCCAAAATAAGTGTCTCAAC	59.247	41.667	0.00	0.00	0.00	3.18
3466	7538	4.377022	CGTCCCAAAATAAGTGTCTCAACG	60.377	45.833	0.00	0.00	0.00	4.10
3467	7539	4.514066	GTCCCAAAATAAGTGTCTCAACGT	59.486	41.667	0.00	0.00	0.00	3.99
3468	7540	5.008316	GTCCCAAAATAAGTGTCTCAACGTT	59.992	40.000	0.00	0.00	0.00	3.99
3469	7541	6.203338	GTCCCAAAATAAGTGTCTCAACGTTA	59.797	38.462	0.00	0.00	0.00	3.18
3470	7542	6.766944	TCCCAAAATAAGTGTCTCAACGTTAA	59.233	34.615	0.00	0.00	0.00	2.01
3471	7543	7.446013	TCCCAAAATAAGTGTCTCAACGTTAAT	59.554	33.333	0.00	0.00	0.00	1.40
3472	7544	8.723311	CCCAAAATAAGTGTCTCAACGTTAATA	58.277	33.333	0.00	0.00	0.00	0.98
3481	7553	9.485206	AGTGTCTCAACGTTAATATAACTTTGT	57.515	29.630	0.00	0.00	33.05	2.83
3482	7554	9.525007	GTGTCTCAACGTTAATATAACTTTGTG	57.475	33.333	0.00	13.36	33.05	3.33
3483	7555	9.263538	TGTCTCAACGTTAATATAACTTTGTGT	57.736	29.630	0.00	0.00	33.05	3.72
3521	7593	6.771188	AGTTGAGACACTTATTTTGAGACG	57.229	37.500	0.00	0.00	0.00	4.18
3522	7594	5.696724	AGTTGAGACACTTATTTTGAGACGG	59.303	40.000	0.00	0.00	0.00	4.79
3523	7595	5.462530	TGAGACACTTATTTTGAGACGGA	57.537	39.130	0.00	0.00	0.00	4.69
3524	7596	5.470368	TGAGACACTTATTTTGAGACGGAG	58.530	41.667	0.00	0.00	0.00	4.63
3525	7597	4.822026	AGACACTTATTTTGAGACGGAGG	58.178	43.478	0.00	0.00	0.00	4.30
3526	7598	3.933332	GACACTTATTTTGAGACGGAGGG	59.067	47.826	0.00	0.00	0.00	4.30
3527	7599	3.581332	ACACTTATTTTGAGACGGAGGGA	59.419	43.478	0.00	0.00	0.00	4.20
3546	7731	6.388619	AGGGAGTACATTTTGAGGTAACAT	57.611	37.500	0.00	0.00	41.41	2.71
3607	7792	9.331282	GATGTAGATGGCTACTTATTTTTCAGT	57.669	33.333	0.00	0.00	45.79	3.41
3613	7798	7.341445	TGGCTACTTATTTTTCAGTTGTGTT	57.659	32.000	0.00	0.00	0.00	3.32
3617	7802	9.724839	GCTACTTATTTTTCAGTTGTGTTAACA	57.275	29.630	3.59	3.59	0.00	2.41
3738	7929	3.848726	CACACAGCTTCAGGTTTTGTTT	58.151	40.909	0.00	0.00	0.00	2.83
3766	7957	5.069648	TCATTTTGTTATGTGGGCTTGTTGA	59.930	36.000	0.00	0.00	0.00	3.18
3789	8000	8.735303	TGACACGATTGTTTTTAATGGTAATG	57.265	30.769	0.00	0.00	35.47	1.90
3792	8003	8.353684	ACACGATTGTTTTTAATGGTAATGACA	58.646	29.630	0.00	0.00	28.43	3.58
3819	8031	6.237901	ACAGTATGAATCTGCCTGTGTTAAA	58.762	36.000	0.00	0.00	39.69	1.52
3823	8035	5.689383	TGAATCTGCCTGTGTTAAAAGTC	57.311	39.130	0.00	0.00	0.00	3.01
3859	8071	4.202050	CCAAGTCAGCCCATAACTAAATGC	60.202	45.833	0.00	0.00	0.00	3.56
3863	8075	2.689471	CAGCCCATAACTAAATGCAGCA	59.311	45.455	0.00	0.00	30.92	4.41
3880	8093	1.280133	AGCATGCCTGTGTGAGTACAT	59.720	47.619	15.66	0.00	39.39	2.29
3895	8108	9.098355	GTGTGAGTACATCTGAAGCATTTTATA	57.902	33.333	0.00	0.00	39.39	0.98
3927	8141	3.594232	TCAAACTATGGGGGTGTTATGGT	59.406	43.478	0.00	0.00	0.00	3.55
3967	8183	9.613428	CATGTACCAAAACTCTAGAAATATCCA	57.387	33.333	0.00	0.00	0.00	3.41
4158	8376	7.201732	GCATAGCATTAGGTGAACTATGTGTTT	60.202	37.037	9.36	0.00	41.34	2.83
4159	8377	6.500684	AGCATTAGGTGAACTATGTGTTTG	57.499	37.500	0.00	0.00	39.30	2.93
4160	8378	6.237901	AGCATTAGGTGAACTATGTGTTTGA	58.762	36.000	0.00	0.00	39.30	2.69
4161	8379	6.372659	AGCATTAGGTGAACTATGTGTTTGAG	59.627	38.462	0.00	0.00	39.30	3.02
4169	8387	6.197096	GTGAACTATGTGTTTGAGTTTTGCTG	59.803	38.462	0.00	0.00	39.30	4.41
4176	8394	0.944386	TTGAGTTTTGCTGACGAGGC	59.056	50.000	0.00	0.00	0.00	4.70
4190	8408	2.417933	GACGAGGCTGTCTTAGTTCGTA	59.582	50.000	0.00	0.00	43.64	3.43
4191	8409	2.816087	ACGAGGCTGTCTTAGTTCGTAA	59.184	45.455	0.00	0.00	42.65	3.18
4198	8416	4.377124	GCTGTCTTAGTTCGTAAAACCAGC	60.377	45.833	0.00	0.00	32.74	4.85
4248	8467	4.383649	GCGGCTCGACGATTTAACATATTA	59.616	41.667	0.00	0.00	35.47	0.98
4250	8469	6.400727	GCGGCTCGACGATTTAACATATTAAT	60.401	38.462	0.00	0.00	35.47	1.40
4530	8749	5.016051	ACAGATTCTGTGCTGTATGTAGG	57.984	43.478	18.35	0.00	43.63	3.18
4537	8756	1.616865	GTGCTGTATGTAGGCCGGATA	59.383	52.381	5.05	0.00	0.00	2.59
4685	8904	0.892755	ACTGCCAGCATTGGTTGATG	59.107	50.000	0.00	0.00	46.80	3.07
4873	9093	7.826260	CAGTTAACTGTTGGTGATTGTTTTT	57.174	32.000	24.70	0.00	39.09	1.94
4926	9146	5.337813	GGGAGCTCATCAAATGATTTTTGGT	60.338	40.000	17.19	0.00	38.85	3.67
4935	9155	8.937884	CATCAAATGATTTTTGGTGCAAATCTA	58.062	29.630	8.98	0.00	40.12	1.98
4939	9159	4.022416	TGATTTTTGGTGCAAATCTAGCGT	60.022	37.500	8.98	0.00	40.12	5.07
4942	9162	0.739462	TGGTGCAAATCTAGCGTCGG	60.739	55.000	0.00	0.00	33.85	4.79
4943	9163	0.459585	GGTGCAAATCTAGCGTCGGA	60.460	55.000	0.00	0.00	33.85	4.55
4986	9206	4.151883	TGAAGCTTTGTAAGGGCAAATCT	58.848	39.130	0.00	0.00	36.68	2.40
5054	9317	7.065803	TCTCGGATGTTTTATTCTGGTGAATTC	59.934	37.037	0.00	0.00	42.37	2.17
5073	9336	7.959651	GTGAATTCTGTCATGTGTATGAACTTC	59.040	37.037	7.05	0.00	44.49	3.01
5110	9373	8.981659	TGACTCAGGTATTCATCTCTTGATTTA	58.018	33.333	0.00	0.00	33.34	1.40
5170	9433	1.149101	ACTTCCATGGAGGGTTGTGT	58.851	50.000	26.12	10.02	38.24	3.72
5181	9444	3.118738	GGAGGGTTGTGTGAGAATATCGT	60.119	47.826	0.00	0.00	0.00	3.73
5196	9459	5.357878	AGAATATCGTGGTGCATGACAAATT	59.642	36.000	0.00	0.00	31.87	1.82
5222	9485	2.219164	TGCAGGGAAGCAGAGCTCA	61.219	57.895	17.77	0.00	38.25	4.26
5225	9488	1.229464	AGGGAAGCAGAGCTCAGGT	60.229	57.895	17.77	11.25	38.25	4.00
5236	9499	3.317711	CAGAGCTCAGGTCGATATCAAGT	59.682	47.826	17.77	0.00	35.00	3.16
5237	9500	3.957497	AGAGCTCAGGTCGATATCAAGTT	59.043	43.478	17.77	0.00	35.00	2.66
5264	9527	5.911378	TTTATCACACATTGCATAAGCCA	57.089	34.783	0.00	0.00	41.13	4.75
5265	9528	5.911378	TTATCACACATTGCATAAGCCAA	57.089	34.783	0.00	0.00	41.13	4.52
5266	9529	6.468333	TTATCACACATTGCATAAGCCAAT	57.532	33.333	0.00	0.00	41.13	3.16
5267	9530	4.804868	TCACACATTGCATAAGCCAATT	57.195	36.364	0.00	0.00	41.13	2.32
5268	9531	4.746729	TCACACATTGCATAAGCCAATTC	58.253	39.130	0.00	0.00	41.13	2.17
5269	9532	4.463539	TCACACATTGCATAAGCCAATTCT	59.536	37.500	0.00	0.00	41.13	2.40
5270	9533	5.651576	TCACACATTGCATAAGCCAATTCTA	59.348	36.000	0.00	0.00	41.13	2.10
5271	9534	6.152492	TCACACATTGCATAAGCCAATTCTAA	59.848	34.615	0.00	0.00	41.13	2.10
5272	9535	6.812656	CACACATTGCATAAGCCAATTCTAAA	59.187	34.615	0.00	0.00	41.13	1.85
5273	9536	7.331440	CACACATTGCATAAGCCAATTCTAAAA	59.669	33.333	0.00	0.00	41.13	1.52
5274	9537	8.042515	ACACATTGCATAAGCCAATTCTAAAAT	58.957	29.630	0.00	0.00	41.13	1.82
5275	9538	8.545420	CACATTGCATAAGCCAATTCTAAAATC	58.455	33.333	0.00	0.00	41.13	2.17
5276	9539	7.712205	ACATTGCATAAGCCAATTCTAAAATCC	59.288	33.333	0.00	0.00	41.13	3.01
5277	9540	6.160576	TGCATAAGCCAATTCTAAAATCCC	57.839	37.500	0.00	0.00	41.13	3.85
5278	9541	5.660417	TGCATAAGCCAATTCTAAAATCCCA	59.340	36.000	0.00	0.00	41.13	4.37
5279	9542	6.327104	TGCATAAGCCAATTCTAAAATCCCAT	59.673	34.615	0.00	0.00	41.13	4.00
5280	9543	7.147514	TGCATAAGCCAATTCTAAAATCCCATT	60.148	33.333	0.00	0.00	41.13	3.16
5281	9544	7.172019	GCATAAGCCAATTCTAAAATCCCATTG	59.828	37.037	0.00	0.00	33.58	2.82
5282	9545	5.027293	AGCCAATTCTAAAATCCCATTGC	57.973	39.130	0.00	0.00	0.00	3.56
5283	9546	4.470664	AGCCAATTCTAAAATCCCATTGCA	59.529	37.500	0.00	0.00	0.00	4.08
5284	9547	5.131475	AGCCAATTCTAAAATCCCATTGCAT	59.869	36.000	0.00	0.00	0.00	3.96
5285	9548	5.237779	GCCAATTCTAAAATCCCATTGCATG	59.762	40.000	0.00	0.00	0.00	4.06
5286	9549	5.237779	CCAATTCTAAAATCCCATTGCATGC	59.762	40.000	11.82	11.82	0.00	4.06
5287	9550	4.405116	TTCTAAAATCCCATTGCATGCC	57.595	40.909	16.68	0.00	0.00	4.40
5288	9551	3.645434	TCTAAAATCCCATTGCATGCCT	58.355	40.909	16.68	0.00	0.00	4.75
5289	9552	4.802307	TCTAAAATCCCATTGCATGCCTA	58.198	39.130	16.68	3.29	0.00	3.93
5290	9553	5.207354	TCTAAAATCCCATTGCATGCCTAA	58.793	37.500	16.68	3.73	0.00	2.69
5291	9554	4.840716	AAAATCCCATTGCATGCCTAAA	57.159	36.364	16.68	2.88	0.00	1.85
5292	9555	5.376756	AAAATCCCATTGCATGCCTAAAT	57.623	34.783	16.68	5.51	0.00	1.40
5293	9556	6.497624	AAAATCCCATTGCATGCCTAAATA	57.502	33.333	16.68	0.00	0.00	1.40
5294	9557	5.473066	AATCCCATTGCATGCCTAAATAC	57.527	39.130	16.68	0.00	0.00	1.89
5295	9558	3.908476	TCCCATTGCATGCCTAAATACA	58.092	40.909	16.68	0.00	0.00	2.29
5296	9559	3.890756	TCCCATTGCATGCCTAAATACAG	59.109	43.478	16.68	1.29	0.00	2.74
5297	9560	3.006110	CCCATTGCATGCCTAAATACAGG	59.994	47.826	16.68	6.22	38.86	4.00
5298	9561	3.006110	CCATTGCATGCCTAAATACAGGG	59.994	47.826	16.68	2.39	36.10	4.45
5299	9562	2.363306	TGCATGCCTAAATACAGGGG	57.637	50.000	16.68	0.00	36.10	4.79
5300	9563	1.849692	TGCATGCCTAAATACAGGGGA	59.150	47.619	16.68	0.00	36.10	4.81
5301	9564	2.243478	TGCATGCCTAAATACAGGGGAA	59.757	45.455	16.68	0.00	36.10	3.97
5302	9565	3.117169	TGCATGCCTAAATACAGGGGAAT	60.117	43.478	16.68	0.00	36.10	3.01
5303	9566	4.105537	TGCATGCCTAAATACAGGGGAATA	59.894	41.667	16.68	0.00	36.10	1.75
5304	9567	4.702131	GCATGCCTAAATACAGGGGAATAG	59.298	45.833	6.36	0.00	36.10	1.73
5305	9568	5.514834	GCATGCCTAAATACAGGGGAATAGA	60.515	44.000	6.36	0.00	36.10	1.98
5306	9569	6.542821	CATGCCTAAATACAGGGGAATAGAA	58.457	40.000	0.00	0.00	36.10	2.10
5307	9570	6.780198	TGCCTAAATACAGGGGAATAGAAT	57.220	37.500	0.00	0.00	36.10	2.40
5308	9571	6.542821	TGCCTAAATACAGGGGAATAGAATG	58.457	40.000	0.00	0.00	36.10	2.67
5309	9572	6.102615	TGCCTAAATACAGGGGAATAGAATGT	59.897	38.462	0.00	0.00	36.10	2.71
5310	9573	7.004691	GCCTAAATACAGGGGAATAGAATGTT	58.995	38.462	0.00	0.00	36.10	2.71
5311	9574	7.175119	GCCTAAATACAGGGGAATAGAATGTTC	59.825	40.741	0.00	0.00	36.10	3.18
5312	9575	8.217799	CCTAAATACAGGGGAATAGAATGTTCA	58.782	37.037	0.00	0.00	31.47	3.18
5313	9576	9.799106	CTAAATACAGGGGAATAGAATGTTCAT	57.201	33.333	0.00	0.00	0.00	2.57
5314	9577	8.469309	AAATACAGGGGAATAGAATGTTCATG	57.531	34.615	0.00	0.00	0.00	3.07
5315	9578	4.210331	ACAGGGGAATAGAATGTTCATGC	58.790	43.478	0.00	0.00	0.00	4.06
5316	9579	4.209538	CAGGGGAATAGAATGTTCATGCA	58.790	43.478	0.00	0.00	0.00	3.96
5317	9580	4.831155	CAGGGGAATAGAATGTTCATGCAT	59.169	41.667	0.00	0.00	0.00	3.96
5318	9581	4.831155	AGGGGAATAGAATGTTCATGCATG	59.169	41.667	21.07	21.07	0.00	4.06
5319	9582	4.586001	GGGGAATAGAATGTTCATGCATGT	59.414	41.667	25.43	6.51	0.00	3.21
5320	9583	5.069516	GGGGAATAGAATGTTCATGCATGTT	59.930	40.000	25.43	12.95	0.00	2.71
5321	9584	5.981315	GGGAATAGAATGTTCATGCATGTTG	59.019	40.000	25.43	2.63	0.00	3.33
5322	9585	6.183360	GGGAATAGAATGTTCATGCATGTTGA	60.183	38.462	25.43	11.10	0.00	3.18
5323	9586	7.259882	GGAATAGAATGTTCATGCATGTTGAA	58.740	34.615	25.43	11.74	0.00	2.69
5324	9587	7.760794	GGAATAGAATGTTCATGCATGTTGAAA	59.239	33.333	25.43	10.35	35.03	2.69
5325	9588	9.142515	GAATAGAATGTTCATGCATGTTGAAAA	57.857	29.630	25.43	10.10	35.03	2.29
5326	9589	9.661563	AATAGAATGTTCATGCATGTTGAAAAT	57.338	25.926	25.43	11.98	35.03	1.82
5329	9592	9.093970	AGAATGTTCATGCATGTTGAAAATATG	57.906	29.630	25.43	0.00	46.68	1.78
5339	9602	7.018635	CATGTTGAAAATATGCCAAATTCCC	57.981	36.000	0.00	0.00	38.58	3.97
5340	9603	5.495640	TGTTGAAAATATGCCAAATTCCCC	58.504	37.500	0.00	0.00	0.00	4.81
5341	9604	4.769345	TGAAAATATGCCAAATTCCCCC	57.231	40.909	0.00	0.00	0.00	5.40
5357	9620	2.005370	CCCCCAACTATACGGCTAGA	57.995	55.000	0.00	0.00	0.00	2.43
5358	9621	2.537143	CCCCCAACTATACGGCTAGAT	58.463	52.381	0.00	0.00	0.00	1.98
5359	9622	3.705051	CCCCCAACTATACGGCTAGATA	58.295	50.000	0.00	0.00	0.00	1.98
5360	9623	3.446516	CCCCCAACTATACGGCTAGATAC	59.553	52.174	0.00	0.00	0.00	2.24
5361	9624	4.084287	CCCCAACTATACGGCTAGATACA	58.916	47.826	0.00	0.00	0.00	2.29
5362	9625	4.082354	CCCCAACTATACGGCTAGATACAC	60.082	50.000	0.00	0.00	0.00	2.90
5363	9626	4.765856	CCCAACTATACGGCTAGATACACT	59.234	45.833	0.00	0.00	0.00	3.55
5364	9627	5.942236	CCCAACTATACGGCTAGATACACTA	59.058	44.000	0.00	0.00	0.00	2.74
5365	9628	6.432162	CCCAACTATACGGCTAGATACACTAA	59.568	42.308	0.00	0.00	0.00	2.24
5366	9629	7.122353	CCCAACTATACGGCTAGATACACTAAT	59.878	40.741	0.00	0.00	0.00	1.73
5367	9630	9.170734	CCAACTATACGGCTAGATACACTAATA	57.829	37.037	0.00	0.00	0.00	0.98
5370	9633	9.902684	ACTATACGGCTAGATACACTAATATGT	57.097	33.333	0.00	0.00	36.56	2.29
5372	9635	5.710984	ACGGCTAGATACACTAATATGTGC	58.289	41.667	0.00	0.00	41.30	4.57
5373	9636	5.477291	ACGGCTAGATACACTAATATGTGCT	59.523	40.000	0.00	0.00	41.30	4.40
5374	9637	6.015350	ACGGCTAGATACACTAATATGTGCTT	60.015	38.462	0.00	0.00	41.30	3.91
5375	9638	7.176165	ACGGCTAGATACACTAATATGTGCTTA	59.824	37.037	0.00	0.00	41.30	3.09
5376	9639	8.027189	CGGCTAGATACACTAATATGTGCTTAA	58.973	37.037	0.00	0.00	41.30	1.85
5377	9640	9.360093	GGCTAGATACACTAATATGTGCTTAAG	57.640	37.037	0.00	0.00	41.30	1.85
5378	9641	9.915629	GCTAGATACACTAATATGTGCTTAAGT	57.084	33.333	4.02	0.00	41.30	2.24
5395	9658	9.262472	GTGCTTAAGTATTCTTATTTGACAACG	57.738	33.333	4.02	0.00	36.25	4.10
5396	9659	8.447833	TGCTTAAGTATTCTTATTTGACAACGG	58.552	33.333	4.02	0.00	36.25	4.44
5397	9660	8.448615	GCTTAAGTATTCTTATTTGACAACGGT	58.551	33.333	4.02	0.00	36.25	4.83
5401	9664	8.928270	AGTATTCTTATTTGACAACGGTAGAG	57.072	34.615	0.00	0.00	0.00	2.43
5402	9665	8.529476	AGTATTCTTATTTGACAACGGTAGAGT	58.471	33.333	0.00	0.00	0.00	3.24
5403	9666	9.148104	GTATTCTTATTTGACAACGGTAGAGTT	57.852	33.333	0.00	0.00	34.15	3.01

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
22	23	6.011981	ACCAATCCACATTTAACTCTTCCCTA	60.012	38.462	0.00	0.00	0.00	3.53
86	87	4.865365	GCTCTAGCACGTTCAAGAAAGTAT	59.135	41.667	1.24	0.00	41.59	2.12
171	173	3.403322	TGGAAGATAAGGCATAAGGGGT	58.597	45.455	0.00	0.00	0.00	4.95
196	198	1.798223	TCAACTCTCCGCGACAAATTG	59.202	47.619	8.23	6.86	0.00	2.32
198	200	1.429463	GTCAACTCTCCGCGACAAAT	58.571	50.000	8.23	0.00	0.00	2.32
242	244	4.161754	TGAGATGTGAATGAGCTGTGATCT	59.838	41.667	0.00	0.00	0.00	2.75
370	373	2.777972	CGTCACCTCCCCGCGATAA	61.778	63.158	8.23	0.00	0.00	1.75
391	409	4.340097	TCTGTCACCGAGTTGAGTTTAAGA	59.660	41.667	0.00	0.00	0.00	2.10
412	430	7.975058	CGATGAGATATAAATGAGCTGTGATCT	59.025	37.037	0.00	0.00	0.00	2.75
442	500	5.507985	GCTATGCCCAAAATTACTGACATCC	60.508	44.000	0.00	0.00	0.00	3.51
443	501	5.507985	GGCTATGCCCAAAATTACTGACATC	60.508	44.000	0.00	0.00	44.06	3.06
464	522	2.164219	CGCAACAAATGGTATTGAGGCT	59.836	45.455	0.00	0.00	33.75	4.58
467	525	3.848272	ACCGCAACAAATGGTATTGAG	57.152	42.857	0.00	0.00	33.25	3.02
468	526	4.762765	ACTAACCGCAACAAATGGTATTGA	59.237	37.500	0.00	0.00	34.11	2.57
473	531	2.486592	GCTACTAACCGCAACAAATGGT	59.513	45.455	0.00	0.00	37.68	3.55
601	660	8.607441	TTCATGTCATCATAACTTACCATAGC	57.393	34.615	0.00	0.00	32.47	2.97
765	1173	4.156008	TCTCTTTTCCCGAGCTAAATTTGC	59.844	41.667	0.00	2.83	0.00	3.68
775	1183	3.477530	ACTGGTTTTCTCTTTTCCCGAG	58.522	45.455	0.00	0.00	0.00	4.63
784	1194	1.004918	CGGGCGACTGGTTTTCTCT	60.005	57.895	0.00	0.00	0.00	3.10
928	1342	0.673644	GTGGTGAGAATGACGGGGTG	60.674	60.000	0.00	0.00	0.00	4.61
1495	1909	0.104934	ACGGGGAGGGAGCAGATAAT	60.105	55.000	0.00	0.00	0.00	1.28
1496	1910	0.759436	GACGGGGAGGGAGCAGATAA	60.759	60.000	0.00	0.00	0.00	1.75
1499	1913	4.779733	GGACGGGGAGGGAGCAGA	62.780	72.222	0.00	0.00	0.00	4.26
1510	1924	1.876497	TACCGAAAACGAGGGACGGG	61.876	60.000	0.00	0.00	46.45	5.28
1516	1930	3.505464	ACAGATCTACCGAAAACGAGG	57.495	47.619	0.00	0.00	0.00	4.63
1635	2049	8.478877	AGTCCAAGTAATTAGAGACTATTGTGG	58.521	37.037	5.32	0.00	33.01	4.17
1726	2140	4.299485	ACATCCCTAAAGTTCTCCCTAGG	58.701	47.826	0.06	0.06	0.00	3.02
1748	2162	0.780637	TATTGCCCACCCCAACTCAA	59.219	50.000	0.00	0.00	0.00	3.02
1875	2301	3.790089	ATTTTCTCAGGAACCCGAACT	57.210	42.857	0.00	0.00	0.00	3.01
1899	2325	8.784553	CATTTAGATGAGTTCTGGGTACTCCCT	61.785	44.444	4.88	0.00	43.81	4.20
1900	2326	6.686632	CATTTAGATGAGTTCTGGGTACTCCC	60.687	46.154	0.00	0.00	43.77	4.30
1901	2327	5.934402	TTTAGATGAGTTCTGGGTACTCC	57.066	43.478	0.00	0.00	41.02	3.85
1902	2328	6.284459	CCATTTAGATGAGTTCTGGGTACTC	58.716	44.000	0.00	0.00	41.86	2.59
1903	2329	5.131142	CCCATTTAGATGAGTTCTGGGTACT	59.869	44.000	0.00	0.00	35.79	2.73
1904	2330	5.130477	TCCCATTTAGATGAGTTCTGGGTAC	59.870	44.000	4.74	0.00	36.04	3.34
1905	2331	5.285401	TCCCATTTAGATGAGTTCTGGGTA	58.715	41.667	4.74	0.00	36.04	3.69
1906	2332	4.111577	TCCCATTTAGATGAGTTCTGGGT	58.888	43.478	4.74	0.00	36.04	4.51
1907	2333	4.778213	TCCCATTTAGATGAGTTCTGGG	57.222	45.455	0.00	0.00	35.95	4.45
1921	2347	9.659135	TGAATGAGACCAAATTATATCCCATTT	57.341	29.630	0.00	0.00	0.00	2.32
1922	2348	9.082313	GTGAATGAGACCAAATTATATCCCATT	57.918	33.333	0.00	0.00	0.00	3.16
1923	2349	7.671398	GGTGAATGAGACCAAATTATATCCCAT	59.329	37.037	0.00	0.00	33.25	4.00
1924	2350	7.004086	GGTGAATGAGACCAAATTATATCCCA	58.996	38.462	0.00	0.00	33.25	4.37
1925	2351	7.175641	CAGGTGAATGAGACCAAATTATATCCC	59.824	40.741	0.00	0.00	35.76	3.85
1926	2352	7.175641	CCAGGTGAATGAGACCAAATTATATCC	59.824	40.741	0.00	0.00	35.76	2.59
1927	2353	7.939039	TCCAGGTGAATGAGACCAAATTATATC	59.061	37.037	0.00	0.00	35.76	1.63
1928	2354	7.815383	TCCAGGTGAATGAGACCAAATTATAT	58.185	34.615	0.00	0.00	35.76	0.86
1929	2355	7.206789	TCCAGGTGAATGAGACCAAATTATA	57.793	36.000	0.00	0.00	35.76	0.98
1930	2356	6.078456	TCCAGGTGAATGAGACCAAATTAT	57.922	37.500	0.00	0.00	35.76	1.28
1931	2357	5.512942	TCCAGGTGAATGAGACCAAATTA	57.487	39.130	0.00	0.00	35.76	1.40
1932	2358	4.387026	TCCAGGTGAATGAGACCAAATT	57.613	40.909	0.00	0.00	35.76	1.82
1933	2359	4.387026	TTCCAGGTGAATGAGACCAAAT	57.613	40.909	0.00	0.00	35.76	2.32
1934	2360	3.874383	TTCCAGGTGAATGAGACCAAA	57.126	42.857	0.00	0.00	35.76	3.28
1935	2361	3.874383	TTTCCAGGTGAATGAGACCAA	57.126	42.857	0.00	0.00	35.76	3.67
1936	2362	3.330405	TGATTTCCAGGTGAATGAGACCA	59.670	43.478	0.00	0.00	35.76	4.02
1937	2363	3.955471	TGATTTCCAGGTGAATGAGACC	58.045	45.455	0.00	0.00	31.67	3.85
1938	2364	5.248640	TCTTGATTTCCAGGTGAATGAGAC	58.751	41.667	0.00	0.00	31.67	3.36
1939	2365	5.503634	TCTTGATTTCCAGGTGAATGAGA	57.496	39.130	0.00	0.00	31.67	3.27
1940	2366	5.474532	TGTTCTTGATTTCCAGGTGAATGAG	59.525	40.000	0.00	0.00	31.67	2.90
1941	2367	5.384336	TGTTCTTGATTTCCAGGTGAATGA	58.616	37.500	0.00	0.00	31.67	2.57
1942	2368	5.710513	TGTTCTTGATTTCCAGGTGAATG	57.289	39.130	0.00	0.00	31.67	2.67
1943	2369	6.729690	TTTGTTCTTGATTTCCAGGTGAAT	57.270	33.333	0.00	0.00	31.67	2.57
1944	2370	6.537453	TTTTGTTCTTGATTTCCAGGTGAA	57.463	33.333	0.00	0.00	0.00	3.18
1945	2371	6.071108	TGTTTTTGTTCTTGATTTCCAGGTGA	60.071	34.615	0.00	0.00	0.00	4.02
1946	2372	6.105333	TGTTTTTGTTCTTGATTTCCAGGTG	58.895	36.000	0.00	0.00	0.00	4.00
1947	2373	6.293004	TGTTTTTGTTCTTGATTTCCAGGT	57.707	33.333	0.00	0.00	0.00	4.00
1948	2374	6.037062	GGTTGTTTTTGTTCTTGATTTCCAGG	59.963	38.462	0.00	0.00	0.00	4.45
1949	2375	6.037062	GGGTTGTTTTTGTTCTTGATTTCCAG	59.963	38.462	0.00	0.00	0.00	3.86
1950	2376	5.877564	GGGTTGTTTTTGTTCTTGATTTCCA	59.122	36.000	0.00	0.00	0.00	3.53
1951	2377	5.877564	TGGGTTGTTTTTGTTCTTGATTTCC	59.122	36.000	0.00	0.00	0.00	3.13
1952	2378	6.454981	CGTGGGTTGTTTTTGTTCTTGATTTC	60.455	38.462	0.00	0.00	0.00	2.17
1953	2379	5.350091	CGTGGGTTGTTTTTGTTCTTGATTT	59.650	36.000	0.00	0.00	0.00	2.17
1954	2380	4.867608	CGTGGGTTGTTTTTGTTCTTGATT	59.132	37.500	0.00	0.00	0.00	2.57
1955	2381	4.081917	ACGTGGGTTGTTTTTGTTCTTGAT	60.082	37.500	0.00	0.00	0.00	2.57
1956	2382	3.256136	ACGTGGGTTGTTTTTGTTCTTGA	59.744	39.130	0.00	0.00	0.00	3.02
1957	2383	3.580731	ACGTGGGTTGTTTTTGTTCTTG	58.419	40.909	0.00	0.00	0.00	3.02
1958	2384	3.256136	TGACGTGGGTTGTTTTTGTTCTT	59.744	39.130	0.00	0.00	0.00	2.52
1959	2385	2.820787	TGACGTGGGTTGTTTTTGTTCT	59.179	40.909	0.00	0.00	0.00	3.01
1960	2386	3.175929	CTGACGTGGGTTGTTTTTGTTC	58.824	45.455	0.00	0.00	0.00	3.18
1961	2387	2.672760	GCTGACGTGGGTTGTTTTTGTT	60.673	45.455	0.00	0.00	0.00	2.83
1962	2388	1.135228	GCTGACGTGGGTTGTTTTTGT	60.135	47.619	0.00	0.00	0.00	2.83
1963	2389	1.135257	TGCTGACGTGGGTTGTTTTTG	60.135	47.619	0.00	0.00	0.00	2.44
1964	2390	1.135228	GTGCTGACGTGGGTTGTTTTT	60.135	47.619	0.00	0.00	0.00	1.94
1965	2391	0.454196	GTGCTGACGTGGGTTGTTTT	59.546	50.000	0.00	0.00	0.00	2.43
1966	2392	0.678366	TGTGCTGACGTGGGTTGTTT	60.678	50.000	0.00	0.00	0.00	2.83
1967	2393	1.078072	TGTGCTGACGTGGGTTGTT	60.078	52.632	0.00	0.00	0.00	2.83
1968	2394	1.817941	GTGTGCTGACGTGGGTTGT	60.818	57.895	0.00	0.00	0.00	3.32
1969	2395	1.817520	TGTGTGCTGACGTGGGTTG	60.818	57.895	0.00	0.00	0.00	3.77
1970	2396	1.817941	GTGTGTGCTGACGTGGGTT	60.818	57.895	0.00	0.00	0.00	4.11
1971	2397	2.203015	GTGTGTGCTGACGTGGGT	60.203	61.111	0.00	0.00	0.00	4.51
1972	2398	3.337889	CGTGTGTGCTGACGTGGG	61.338	66.667	0.00	0.00	0.00	4.61
1973	2399	4.000557	GCGTGTGTGCTGACGTGG	62.001	66.667	0.00	0.00	37.89	4.94
1974	2400	2.484631	GATGCGTGTGTGCTGACGTG	62.485	60.000	0.00	0.00	37.89	4.49
1975	2401	2.280119	ATGCGTGTGTGCTGACGT	60.280	55.556	0.00	0.00	37.89	4.34
1976	2402	1.560004	AAGATGCGTGTGTGCTGACG	61.560	55.000	0.00	0.00	38.63	4.35
1977	2403	1.428448	TAAGATGCGTGTGTGCTGAC	58.572	50.000	0.00	0.00	35.36	3.51
1978	2404	2.385013	ATAAGATGCGTGTGTGCTGA	57.615	45.000	0.00	0.00	35.36	4.26
1979	2405	2.033407	GCTATAAGATGCGTGTGTGCTG	60.033	50.000	0.00	0.00	35.36	4.41
1980	2406	2.205074	GCTATAAGATGCGTGTGTGCT	58.795	47.619	0.00	0.00	35.36	4.40
1981	2407	1.933181	TGCTATAAGATGCGTGTGTGC	59.067	47.619	0.00	0.00	0.00	4.57
1982	2408	3.803778	TGATGCTATAAGATGCGTGTGTG	59.196	43.478	0.00	0.00	0.00	3.82
1983	2409	3.804325	GTGATGCTATAAGATGCGTGTGT	59.196	43.478	0.00	0.00	0.00	3.72
1984	2410	3.803778	TGTGATGCTATAAGATGCGTGTG	59.196	43.478	0.00	0.00	0.00	3.82
1985	2411	4.058721	TGTGATGCTATAAGATGCGTGT	57.941	40.909	0.00	0.00	0.00	4.49
1986	2412	4.092529	GGATGTGATGCTATAAGATGCGTG	59.907	45.833	0.00	0.00	0.00	5.34
1987	2413	4.248859	GGATGTGATGCTATAAGATGCGT	58.751	43.478	0.00	0.00	0.00	5.24
1988	2414	4.248058	TGGATGTGATGCTATAAGATGCG	58.752	43.478	0.00	0.00	0.00	4.73
1989	2415	6.404403	CCATTGGATGTGATGCTATAAGATGC	60.404	42.308	0.00	0.00	0.00	3.91
1990	2416	6.404403	GCCATTGGATGTGATGCTATAAGATG	60.404	42.308	6.95	0.00	0.00	2.90
1991	2417	5.651139	GCCATTGGATGTGATGCTATAAGAT	59.349	40.000	6.95	0.00	0.00	2.40
1992	2418	5.005740	GCCATTGGATGTGATGCTATAAGA	58.994	41.667	6.95	0.00	0.00	2.10
1993	2419	5.008331	AGCCATTGGATGTGATGCTATAAG	58.992	41.667	6.95	0.00	0.00	1.73
1994	2420	4.989277	AGCCATTGGATGTGATGCTATAA	58.011	39.130	6.95	0.00	0.00	0.98
1995	2421	4.645863	AGCCATTGGATGTGATGCTATA	57.354	40.909	6.95	0.00	0.00	1.31
1996	2422	3.520691	AGCCATTGGATGTGATGCTAT	57.479	42.857	6.95	0.00	0.00	2.97
1997	2423	4.041938	TCATAGCCATTGGATGTGATGCTA	59.958	41.667	15.41	3.32	34.51	3.49
1998	2424	3.154710	CATAGCCATTGGATGTGATGCT	58.845	45.455	11.86	0.00	31.97	3.79
1999	2425	3.151554	TCATAGCCATTGGATGTGATGC	58.848	45.455	15.41	0.00	34.51	3.91
2000	2426	5.278808	CCTTTCATAGCCATTGGATGTGATG	60.279	44.000	19.25	14.78	38.85	3.07
2001	2427	4.831155	CCTTTCATAGCCATTGGATGTGAT	59.169	41.667	19.25	0.00	38.85	3.06
2002	2428	4.209538	CCTTTCATAGCCATTGGATGTGA	58.790	43.478	15.41	15.41	37.44	3.58
2003	2429	3.956199	ACCTTTCATAGCCATTGGATGTG	59.044	43.478	11.10	11.10	31.56	3.21
2004	2430	3.956199	CACCTTTCATAGCCATTGGATGT	59.044	43.478	6.95	0.00	0.00	3.06
2005	2431	4.209538	TCACCTTTCATAGCCATTGGATG	58.790	43.478	6.95	2.32	0.00	3.51
2006	2432	4.524802	TCACCTTTCATAGCCATTGGAT	57.475	40.909	6.95	1.78	0.00	3.41
2007	2433	4.314522	TTCACCTTTCATAGCCATTGGA	57.685	40.909	6.95	0.00	0.00	3.53
2008	2434	4.646040	TCATTCACCTTTCATAGCCATTGG	59.354	41.667	0.00	0.00	0.00	3.16
2009	2435	5.591472	TCTCATTCACCTTTCATAGCCATTG	59.409	40.000	0.00	0.00	0.00	2.82
2010	2436	5.591877	GTCTCATTCACCTTTCATAGCCATT	59.408	40.000	0.00	0.00	0.00	3.16
2011	2437	5.128919	GTCTCATTCACCTTTCATAGCCAT	58.871	41.667	0.00	0.00	0.00	4.40
2012	2438	4.517285	GTCTCATTCACCTTTCATAGCCA	58.483	43.478	0.00	0.00	0.00	4.75
2013	2439	3.879892	GGTCTCATTCACCTTTCATAGCC	59.120	47.826	0.00	0.00	0.00	3.93
2014	2440	4.517285	TGGTCTCATTCACCTTTCATAGC	58.483	43.478	0.00	0.00	34.66	2.97
2015	2441	7.636150	ATTTGGTCTCATTCACCTTTCATAG	57.364	36.000	0.00	0.00	34.66	2.23
2016	2442	9.699410	ATAATTTGGTCTCATTCACCTTTCATA	57.301	29.630	0.00	0.00	34.66	2.15
2017	2443	6.923199	AATTTGGTCTCATTCACCTTTCAT	57.077	33.333	0.00	0.00	34.66	2.57
2018	2444	9.699410	ATATAATTTGGTCTCATTCACCTTTCA	57.301	29.630	0.00	0.00	34.66	2.69
2020	2446	9.927081	AGATATAATTTGGTCTCATTCACCTTT	57.073	29.630	0.00	0.00	34.66	3.11
2021	2447	9.566432	GAGATATAATTTGGTCTCATTCACCTT	57.434	33.333	8.11	0.00	37.60	3.50
2022	2448	8.717717	TGAGATATAATTTGGTCTCATTCACCT	58.282	33.333	10.50	0.00	41.40	4.00
2023	2449	8.908786	TGAGATATAATTTGGTCTCATTCACC	57.091	34.615	10.50	0.00	41.40	4.02
2030	2456	9.381033	CATCCAGATGAGATATAATTTGGTCTC	57.619	37.037	1.16	6.68	41.20	3.36
2031	2457	9.109246	TCATCCAGATGAGATATAATTTGGTCT	57.891	33.333	6.24	0.00	42.42	3.85
2046	2472	5.682234	TTTGCTAGAACTCATCCAGATGA	57.318	39.130	9.85	9.85	44.83	2.92
2047	2473	5.879223	AGTTTTGCTAGAACTCATCCAGATG	59.121	40.000	0.98	0.98	40.09	2.90
2048	2474	5.879223	CAGTTTTGCTAGAACTCATCCAGAT	59.121	40.000	0.00	0.00	35.26	2.90
2049	2475	5.012046	TCAGTTTTGCTAGAACTCATCCAGA	59.988	40.000	0.00	0.00	35.26	3.86
2050	2476	5.240891	TCAGTTTTGCTAGAACTCATCCAG	58.759	41.667	0.00	0.00	35.26	3.86
2051	2477	5.227569	TCAGTTTTGCTAGAACTCATCCA	57.772	39.130	0.00	0.00	35.26	3.41
2052	2478	6.560253	TTTCAGTTTTGCTAGAACTCATCC	57.440	37.500	0.00	0.00	35.26	3.51
2078	2504	9.512588	TGTGGATTTTTATGGCATAACAATTTT	57.487	25.926	24.67	10.48	28.33	1.82
2079	2505	9.165035	CTGTGGATTTTTATGGCATAACAATTT	57.835	29.630	24.67	11.06	28.33	1.82
2087	2513	5.999205	TTCACTGTGGATTTTTATGGCAT	57.001	34.783	4.88	4.88	0.00	4.40
2098	2524	8.017418	TGGAAACTAAAATTTTCACTGTGGAT	57.983	30.769	6.72	0.00	35.08	3.41
2228	2663	8.031277	GCATCCACAAGTAATTTCTTGAGATTT	58.969	33.333	25.95	9.57	45.11	2.17
2305	2741	7.038154	TGTGATTCAAAACCAAAGGTCTAAG	57.962	36.000	0.00	0.00	33.12	2.18
2335	2771	9.391006	AGCGGATCAACTTAATTTCATAAGTAA	57.609	29.630	0.00	0.00	43.52	2.24
2336	2772	8.958119	AGCGGATCAACTTAATTTCATAAGTA	57.042	30.769	0.00	0.00	43.52	2.24
2337	2773	7.865706	AGCGGATCAACTTAATTTCATAAGT	57.134	32.000	0.00	0.00	45.62	2.24
2338	2774	7.166473	GCAAGCGGATCAACTTAATTTCATAAG	59.834	37.037	0.00	0.00	38.56	1.73
2339	2775	6.972328	GCAAGCGGATCAACTTAATTTCATAA	59.028	34.615	0.00	0.00	0.00	1.90
2340	2776	6.494842	GCAAGCGGATCAACTTAATTTCATA	58.505	36.000	0.00	0.00	0.00	2.15
2341	2777	5.343249	GCAAGCGGATCAACTTAATTTCAT	58.657	37.500	0.00	0.00	0.00	2.57
2342	2778	4.671508	CGCAAGCGGATCAACTTAATTTCA	60.672	41.667	6.55	0.00	35.56	2.69
2343	2779	3.786048	CGCAAGCGGATCAACTTAATTTC	59.214	43.478	6.55	0.00	35.56	2.17
2344	2780	3.438781	TCGCAAGCGGATCAACTTAATTT	59.561	39.130	14.98	0.00	40.25	1.82
2345	2781	3.006940	TCGCAAGCGGATCAACTTAATT	58.993	40.909	14.98	0.00	40.25	1.40
2359	2795	3.818787	CCAGCACCCATCGCAAGC	61.819	66.667	0.00	0.00	37.18	4.01
2376	2812	4.748600	GGGAATTACGACAGCTACATAACC	59.251	45.833	0.00	0.00	0.00	2.85
2474	2910	7.359598	GCAACAGTTCACTAACTACAGAAGATG	60.360	40.741	0.00	0.00	44.28	2.90
2518	2955	5.573337	AAAACATGCAAATCTAGCTCTCC	57.427	39.130	0.00	0.00	0.00	3.71
2526	2963	8.981647	GTTAGTTGATGAAAAACATGCAAATCT	58.018	29.630	0.00	0.00	39.56	2.40
2674	3112	6.044404	AGAGAAAAACTGATTACCCCTCAGAA	59.956	38.462	7.28	0.00	42.22	3.02
2712	3150	5.530171	AGAGCATCCATTCATAATGTGTCAC	59.470	40.000	0.00	0.00	37.18	3.67
2773	3214	9.267084	CTAGAAATACAAATCCTAGAAGCTTCC	57.733	37.037	22.81	5.35	31.06	3.46
2796	3238	7.963532	ACATACAACACCCAGAATATACCTAG	58.036	38.462	0.00	0.00	0.00	3.02
2798	3241	6.615726	AGACATACAACACCCAGAATATACCT	59.384	38.462	0.00	0.00	0.00	3.08
2806	3250	5.084519	AGAAGTAGACATACAACACCCAGA	58.915	41.667	0.00	0.00	34.07	3.86
2818	3262	5.746990	ACACAAAGCCTAGAAGTAGACAT	57.253	39.130	0.00	0.00	0.00	3.06
2822	3266	8.258708	ACCTAAATACACAAAGCCTAGAAGTAG	58.741	37.037	0.00	0.00	0.00	2.57
2905	3442	4.516652	ATTAAGCTTCTCCCTGCAAGAT	57.483	40.909	0.00	0.00	34.07	2.40
3181	7133	8.369424	TCCAGTAACTTAAGTAACTTATGCACA	58.631	33.333	8.92	0.00	0.00	4.57
3227	7179	8.823220	AGGCCACATATAAAATAACTTCTTGT	57.177	30.769	5.01	0.00	0.00	3.16
3323	7395	3.819337	CAGGGCCATGAACTGATGATTAG	59.181	47.826	13.35	0.00	34.21	1.73
3394	7466	8.164070	GGGACCCATGTATCAACTTTATAGAAT	58.836	37.037	5.33	0.00	0.00	2.40
3395	7467	7.349859	AGGGACCCATGTATCAACTTTATAGAA	59.650	37.037	14.60	0.00	0.00	2.10
3396	7468	6.849697	AGGGACCCATGTATCAACTTTATAGA	59.150	38.462	14.60	0.00	0.00	1.98
3397	7469	6.936900	CAGGGACCCATGTATCAACTTTATAG	59.063	42.308	14.60	0.00	0.00	1.31
3398	7470	6.690460	GCAGGGACCCATGTATCAACTTTATA	60.690	42.308	14.60	0.00	0.00	0.98
3399	7471	5.694995	CAGGGACCCATGTATCAACTTTAT	58.305	41.667	14.60	0.00	0.00	1.40
3400	7472	4.627741	GCAGGGACCCATGTATCAACTTTA	60.628	45.833	14.60	0.00	0.00	1.85
3401	7473	3.877735	GCAGGGACCCATGTATCAACTTT	60.878	47.826	14.60	0.00	0.00	2.66
3402	7474	2.357154	GCAGGGACCCATGTATCAACTT	60.357	50.000	14.60	0.00	0.00	2.66
3403	7475	1.212935	GCAGGGACCCATGTATCAACT	59.787	52.381	14.60	0.00	0.00	3.16
3404	7476	1.212935	AGCAGGGACCCATGTATCAAC	59.787	52.381	14.60	0.00	0.00	3.18
3405	7477	1.490490	GAGCAGGGACCCATGTATCAA	59.510	52.381	14.60	0.00	0.00	2.57
3406	7478	1.131638	GAGCAGGGACCCATGTATCA	58.868	55.000	14.60	0.00	0.00	2.15
3407	7479	1.428869	AGAGCAGGGACCCATGTATC	58.571	55.000	14.60	10.32	0.00	2.24
3408	7480	1.492176	CAAGAGCAGGGACCCATGTAT	59.508	52.381	14.60	1.85	0.00	2.29
3409	7481	0.911769	CAAGAGCAGGGACCCATGTA	59.088	55.000	14.60	0.00	0.00	2.29
3410	7482	1.136329	ACAAGAGCAGGGACCCATGT	61.136	55.000	14.60	4.88	0.00	3.21
3411	7483	0.911769	TACAAGAGCAGGGACCCATG	59.088	55.000	14.60	9.37	0.00	3.66
3412	7484	0.912486	GTACAAGAGCAGGGACCCAT	59.088	55.000	14.60	0.00	0.00	4.00
3413	7485	0.472925	TGTACAAGAGCAGGGACCCA	60.473	55.000	14.60	0.00	0.00	4.51
3414	7486	0.912486	ATGTACAAGAGCAGGGACCC	59.088	55.000	0.59	0.59	0.00	4.46
3415	7487	1.407437	CCATGTACAAGAGCAGGGACC	60.407	57.143	0.00	0.00	38.68	4.46
3416	7488	2.014068	GCCATGTACAAGAGCAGGGAC	61.014	57.143	0.00	0.00	38.68	4.46
3417	7489	0.253044	GCCATGTACAAGAGCAGGGA	59.747	55.000	0.00	0.00	38.68	4.20
3418	7490	0.254178	AGCCATGTACAAGAGCAGGG	59.746	55.000	15.03	0.00	39.31	4.45
3419	7491	1.661341	GAGCCATGTACAAGAGCAGG	58.339	55.000	15.03	5.90	0.00	4.85
3420	7492	1.661341	GGAGCCATGTACAAGAGCAG	58.339	55.000	15.03	0.00	0.00	4.24
3421	7493	0.253044	GGGAGCCATGTACAAGAGCA	59.747	55.000	15.03	0.00	0.00	4.26
3422	7494	0.543749	AGGGAGCCATGTACAAGAGC	59.456	55.000	0.00	3.13	0.00	4.09
3423	7495	2.739932	CGAAGGGAGCCATGTACAAGAG	60.740	54.545	0.00	0.00	0.00	2.85
3424	7496	1.207089	CGAAGGGAGCCATGTACAAGA	59.793	52.381	0.00	0.00	0.00	3.02
3425	7497	1.066143	ACGAAGGGAGCCATGTACAAG	60.066	52.381	0.00	0.00	0.00	3.16
3426	7498	0.981183	ACGAAGGGAGCCATGTACAA	59.019	50.000	0.00	0.00	0.00	2.41
3427	7499	0.535335	GACGAAGGGAGCCATGTACA	59.465	55.000	0.00	0.00	0.00	2.90
3428	7500	0.179081	GGACGAAGGGAGCCATGTAC	60.179	60.000	0.00	0.00	0.00	2.90
3429	7501	1.335132	GGGACGAAGGGAGCCATGTA	61.335	60.000	0.00	0.00	0.00	2.29
3430	7502	2.670148	GGGACGAAGGGAGCCATGT	61.670	63.158	0.00	0.00	0.00	3.21
3431	7503	2.190578	GGGACGAAGGGAGCCATG	59.809	66.667	0.00	0.00	0.00	3.66
3432	7504	1.497309	TTTGGGACGAAGGGAGCCAT	61.497	55.000	0.00	0.00	0.00	4.40
3433	7505	1.710996	TTTTGGGACGAAGGGAGCCA	61.711	55.000	0.00	0.00	0.00	4.75
3434	7506	0.323451	ATTTTGGGACGAAGGGAGCC	60.323	55.000	0.00	0.00	0.00	4.70
3435	7507	2.413310	TATTTTGGGACGAAGGGAGC	57.587	50.000	0.00	0.00	0.00	4.70
3436	7508	3.689649	CACTTATTTTGGGACGAAGGGAG	59.310	47.826	0.00	0.00	0.00	4.30
3437	7509	3.073356	ACACTTATTTTGGGACGAAGGGA	59.927	43.478	0.00	0.00	0.00	4.20
3438	7510	3.418047	ACACTTATTTTGGGACGAAGGG	58.582	45.455	0.00	0.00	0.00	3.95
3439	7511	4.324267	AGACACTTATTTTGGGACGAAGG	58.676	43.478	0.00	0.00	0.00	3.46
3440	7512	4.994852	TGAGACACTTATTTTGGGACGAAG	59.005	41.667	0.00	0.00	0.00	3.79
3441	7513	4.963373	TGAGACACTTATTTTGGGACGAA	58.037	39.130	0.00	0.00	0.00	3.85
3442	7514	4.610605	TGAGACACTTATTTTGGGACGA	57.389	40.909	0.00	0.00	0.00	4.20
3443	7515	4.377022	CGTTGAGACACTTATTTTGGGACG	60.377	45.833	0.00	0.00	0.00	4.79
3444	7516	4.514066	ACGTTGAGACACTTATTTTGGGAC	59.486	41.667	0.00	0.00	0.00	4.46
3445	7517	4.710324	ACGTTGAGACACTTATTTTGGGA	58.290	39.130	0.00	0.00	0.00	4.37
3446	7518	5.432885	AACGTTGAGACACTTATTTTGGG	57.567	39.130	0.00	0.00	0.00	4.12
3455	7527	9.485206	ACAAAGTTATATTAACGTTGAGACACT	57.515	29.630	23.39	3.40	40.42	3.55
3456	7528	9.525007	CACAAAGTTATATTAACGTTGAGACAC	57.475	33.333	23.39	0.95	40.42	3.67
3457	7529	9.263538	ACACAAAGTTATATTAACGTTGAGACA	57.736	29.630	23.39	0.00	40.42	3.41
3495	7567	8.761497	CGTCTCAAAATAAGTGTCTCAACTTTA	58.239	33.333	0.00	0.00	40.77	1.85
3496	7568	7.254795	CCGTCTCAAAATAAGTGTCTCAACTTT	60.255	37.037	0.00	0.00	40.77	2.66
3497	7569	6.202954	CCGTCTCAAAATAAGTGTCTCAACTT	59.797	38.462	0.00	0.00	42.89	2.66
3498	7570	5.696724	CCGTCTCAAAATAAGTGTCTCAACT	59.303	40.000	0.00	0.00	0.00	3.16
3499	7571	5.694910	TCCGTCTCAAAATAAGTGTCTCAAC	59.305	40.000	0.00	0.00	0.00	3.18
3500	7572	5.849510	TCCGTCTCAAAATAAGTGTCTCAA	58.150	37.500	0.00	0.00	0.00	3.02
3501	7573	5.462530	TCCGTCTCAAAATAAGTGTCTCA	57.537	39.130	0.00	0.00	0.00	3.27
3502	7574	4.865365	CCTCCGTCTCAAAATAAGTGTCTC	59.135	45.833	0.00	0.00	0.00	3.36
3503	7575	4.322801	CCCTCCGTCTCAAAATAAGTGTCT	60.323	45.833	0.00	0.00	0.00	3.41
3504	7576	3.933332	CCCTCCGTCTCAAAATAAGTGTC	59.067	47.826	0.00	0.00	0.00	3.67
3505	7577	3.581332	TCCCTCCGTCTCAAAATAAGTGT	59.419	43.478	0.00	0.00	0.00	3.55
3506	7578	4.184629	CTCCCTCCGTCTCAAAATAAGTG	58.815	47.826	0.00	0.00	0.00	3.16
3507	7579	3.838903	ACTCCCTCCGTCTCAAAATAAGT	59.161	43.478	0.00	0.00	0.00	2.24
3508	7580	4.473477	ACTCCCTCCGTCTCAAAATAAG	57.527	45.455	0.00	0.00	0.00	1.73
3509	7581	4.773674	TGTACTCCCTCCGTCTCAAAATAA	59.226	41.667	0.00	0.00	0.00	1.40
3510	7582	4.346730	TGTACTCCCTCCGTCTCAAAATA	58.653	43.478	0.00	0.00	0.00	1.40
3511	7583	3.170717	TGTACTCCCTCCGTCTCAAAAT	58.829	45.455	0.00	0.00	0.00	1.82
3512	7584	2.600790	TGTACTCCCTCCGTCTCAAAA	58.399	47.619	0.00	0.00	0.00	2.44
3513	7585	2.297698	TGTACTCCCTCCGTCTCAAA	57.702	50.000	0.00	0.00	0.00	2.69
3514	7586	2.526888	ATGTACTCCCTCCGTCTCAA	57.473	50.000	0.00	0.00	0.00	3.02
3515	7587	2.526888	AATGTACTCCCTCCGTCTCA	57.473	50.000	0.00	0.00	0.00	3.27
3516	7588	3.194968	TCAAAATGTACTCCCTCCGTCTC	59.805	47.826	0.00	0.00	0.00	3.36
3517	7589	3.170717	TCAAAATGTACTCCCTCCGTCT	58.829	45.455	0.00	0.00	0.00	4.18
3518	7590	3.522553	CTCAAAATGTACTCCCTCCGTC	58.477	50.000	0.00	0.00	0.00	4.79
3519	7591	2.236395	CCTCAAAATGTACTCCCTCCGT	59.764	50.000	0.00	0.00	0.00	4.69
3520	7592	2.236395	ACCTCAAAATGTACTCCCTCCG	59.764	50.000	0.00	0.00	0.00	4.63
3521	7593	5.183969	GTTACCTCAAAATGTACTCCCTCC	58.816	45.833	0.00	0.00	0.00	4.30
3522	7594	5.801380	TGTTACCTCAAAATGTACTCCCTC	58.199	41.667	0.00	0.00	0.00	4.30
3523	7595	5.836024	TGTTACCTCAAAATGTACTCCCT	57.164	39.130	0.00	0.00	0.00	4.20
3524	7596	7.562135	TCTATGTTACCTCAAAATGTACTCCC	58.438	38.462	0.00	0.00	0.00	4.30
3525	7597	8.475639	TCTCTATGTTACCTCAAAATGTACTCC	58.524	37.037	0.00	0.00	0.00	3.85
3526	7598	9.871238	TTCTCTATGTTACCTCAAAATGTACTC	57.129	33.333	0.00	0.00	0.00	2.59
3607	7792	3.181501	GCAACTGACTGCTGTTAACACAA	60.182	43.478	3.59	0.00	39.34	3.33
3738	7929	5.999205	AGCCCACATAACAAAATGATTCA	57.001	34.783	0.00	0.00	0.00	2.57
3766	7957	8.353684	TGTCATTACCATTAAAAACAATCGTGT	58.646	29.630	0.00	0.00	40.75	4.49
3789	8000	6.018425	CACAGGCAGATTCATACTGTATTGTC	60.018	42.308	0.00	0.00	40.14	3.18
3792	8003	5.994250	ACACAGGCAGATTCATACTGTATT	58.006	37.500	0.00	0.00	40.14	1.89
3842	8054	2.689471	TGCTGCATTTAGTTATGGGCTG	59.311	45.455	0.00	0.00	0.00	4.85
3859	8071	1.081892	GTACTCACACAGGCATGCTG	58.918	55.000	18.92	15.67	0.00	4.41
3863	8075	2.833943	TCAGATGTACTCACACAGGCAT	59.166	45.455	0.00	0.00	37.54	4.40
3867	8079	3.917988	TGCTTCAGATGTACTCACACAG	58.082	45.455	0.00	0.00	37.54	3.66
3870	8082	9.317936	CTATAAAATGCTTCAGATGTACTCACA	57.682	33.333	0.00	0.00	39.52	3.58
3880	8093	9.539825	GAAGACAGATCTATAAAATGCTTCAGA	57.460	33.333	0.00	0.00	33.57	3.27
3895	8108	4.164988	CCCCCATAGTTTGAAGACAGATCT	59.835	45.833	0.00	0.00	36.42	2.75
3943	8159	9.613428	CATGGATATTTCTAGAGTTTTGGTACA	57.387	33.333	0.00	0.00	0.00	2.90
3944	8160	9.057089	CCATGGATATTTCTAGAGTTTTGGTAC	57.943	37.037	5.56	0.00	0.00	3.34
3967	8183	3.541242	TCCCAAAACATTCTGGACCAT	57.459	42.857	0.00	0.00	34.35	3.55
4076	8293	8.565896	TTTACTCAACAGATGCAGACAAATAT	57.434	30.769	0.00	0.00	0.00	1.28
4114	8331	8.640063	TGCTATGCATTATGGTCAAATAGAAT	57.360	30.769	3.54	0.00	31.71	2.40
4140	8358	8.402472	CAAAACTCAAACACATAGTTCACCTAA	58.598	33.333	0.00	0.00	40.26	2.69
4142	8360	6.680378	GCAAAACTCAAACACATAGTTCACCT	60.680	38.462	0.00	0.00	40.26	4.00
4158	8376	0.106708	AGCCTCGTCAGCAAAACTCA	59.893	50.000	0.00	0.00	0.00	3.41
4159	8377	0.514691	CAGCCTCGTCAGCAAAACTC	59.485	55.000	0.00	0.00	0.00	3.01
4160	8378	0.179045	ACAGCCTCGTCAGCAAAACT	60.179	50.000	0.00	0.00	0.00	2.66
4161	8379	0.235926	GACAGCCTCGTCAGCAAAAC	59.764	55.000	0.00	0.00	35.88	2.43
4169	8387	1.199558	ACGAACTAAGACAGCCTCGTC	59.800	52.381	0.00	0.00	40.33	4.20
4176	8394	4.748102	TGCTGGTTTTACGAACTAAGACAG	59.252	41.667	0.00	0.00	0.00	3.51
4190	8408	4.729868	ACAAGGACTTATCTGCTGGTTTT	58.270	39.130	0.00	0.00	0.00	2.43
4191	8409	4.373156	ACAAGGACTTATCTGCTGGTTT	57.627	40.909	0.00	0.00	0.00	3.27
4198	8416	5.947228	TTGCTGAAACAAGGACTTATCTG	57.053	39.130	0.00	0.00	0.00	2.90
4248	8467	3.897505	CCAAGGACCTGGAAAGAAACATT	59.102	43.478	0.00	0.00	38.96	2.71
4250	8469	2.512056	TCCAAGGACCTGGAAAGAAACA	59.488	45.455	0.00	0.00	42.69	2.83
4530	8749	1.480954	TCTCTGTCCTTGTTATCCGGC	59.519	52.381	0.00	0.00	0.00	6.13
4685	8904	3.561503	ACAATTTCCGAAAACTAAGCGC	58.438	40.909	0.00	0.00	0.00	5.92
4926	9146	3.446310	TTATCCGACGCTAGATTTGCA	57.554	42.857	0.00	0.00	0.00	4.08
4935	9155	5.277345	GCAAGAACATTAATTATCCGACGCT	60.277	40.000	0.00	0.00	0.00	5.07
4939	9159	6.119536	ACAGGCAAGAACATTAATTATCCGA	58.880	36.000	0.00	0.00	0.00	4.55
4942	9162	9.294030	CTTCAACAGGCAAGAACATTAATTATC	57.706	33.333	0.00	0.00	0.00	1.75
4943	9163	7.761249	GCTTCAACAGGCAAGAACATTAATTAT	59.239	33.333	0.00	0.00	0.00	1.28
5036	9268	8.299570	ACATGACAGAATTCACCAGAATAAAAC	58.700	33.333	8.44	0.00	43.52	2.43
5039	9302	6.942005	ACACATGACAGAATTCACCAGAATAA	59.058	34.615	8.44	0.00	43.52	1.40
5054	9317	3.062639	GGCGAAGTTCATACACATGACAG	59.937	47.826	0.00	0.00	40.94	3.51
5073	9336	3.667497	ACCTGAGTCATATACATGGCG	57.333	47.619	0.00	0.00	41.87	5.69
5110	9373	9.899226	GTTTTAGCTTCAAATTTGTCTACAGAT	57.101	29.630	17.47	8.52	0.00	2.90
5126	9389	4.219802	GTTGCGGAGAAAGTTTTAGCTTC	58.780	43.478	0.00	0.00	0.00	3.86
5170	9433	3.118811	TGTCATGCACCACGATATTCTCA	60.119	43.478	0.00	0.00	0.00	3.27
5210	9473	0.459489	ATCGACCTGAGCTCTGCTTC	59.541	55.000	16.19	11.93	39.88	3.86
5243	9506	5.911378	TTGGCTTATGCAATGTGTGATAA	57.089	34.783	2.72	0.00	41.91	1.75
5245	9508	5.128171	AGAATTGGCTTATGCAATGTGTGAT	59.872	36.000	2.72	0.00	41.91	3.06
5247	9510	4.751060	AGAATTGGCTTATGCAATGTGTG	58.249	39.130	2.72	0.00	41.91	3.82
5257	9520	7.147514	TGCAATGGGATTTTAGAATTGGCTTAT	60.148	33.333	0.00	0.00	0.00	1.73
5258	9521	6.155910	TGCAATGGGATTTTAGAATTGGCTTA	59.844	34.615	0.00	0.00	0.00	3.09
5259	9522	5.045724	TGCAATGGGATTTTAGAATTGGCTT	60.046	36.000	0.00	0.00	0.00	4.35
5260	9523	4.470664	TGCAATGGGATTTTAGAATTGGCT	59.529	37.500	0.00	0.00	0.00	4.75
5261	9524	4.768583	TGCAATGGGATTTTAGAATTGGC	58.231	39.130	0.00	0.00	0.00	4.52
5262	9525	5.237779	GCATGCAATGGGATTTTAGAATTGG	59.762	40.000	14.21	0.00	46.86	3.16
5263	9526	5.237779	GGCATGCAATGGGATTTTAGAATTG	59.762	40.000	21.36	0.00	46.86	2.32
5264	9527	5.131475	AGGCATGCAATGGGATTTTAGAATT	59.869	36.000	21.36	0.00	46.86	2.17
5265	9528	4.657039	AGGCATGCAATGGGATTTTAGAAT	59.343	37.500	21.36	0.00	46.86	2.40
5266	9529	4.032310	AGGCATGCAATGGGATTTTAGAA	58.968	39.130	21.36	0.00	46.86	2.10
5267	9530	3.645434	AGGCATGCAATGGGATTTTAGA	58.355	40.909	21.36	0.00	46.86	2.10
5268	9531	5.534207	TTAGGCATGCAATGGGATTTTAG	57.466	39.130	21.36	0.00	46.86	1.85
5269	9532	5.946942	TTTAGGCATGCAATGGGATTTTA	57.053	34.783	21.36	0.00	46.86	1.52
5270	9533	4.840716	TTTAGGCATGCAATGGGATTTT	57.159	36.364	21.36	0.00	46.86	1.82
5271	9534	5.366186	TGTATTTAGGCATGCAATGGGATTT	59.634	36.000	21.36	0.00	46.86	2.17
5272	9535	4.900652	TGTATTTAGGCATGCAATGGGATT	59.099	37.500	21.36	0.00	46.86	3.01
5273	9536	4.482030	TGTATTTAGGCATGCAATGGGAT	58.518	39.130	21.36	7.77	46.86	3.85
5274	9537	3.890756	CTGTATTTAGGCATGCAATGGGA	59.109	43.478	21.36	0.00	46.86	4.37
5275	9538	3.006110	CCTGTATTTAGGCATGCAATGGG	59.994	47.826	21.36	10.61	46.86	4.00
5276	9539	3.006110	CCCTGTATTTAGGCATGCAATGG	59.994	47.826	21.36	8.31	46.86	3.16
5278	9541	3.117169	TCCCCTGTATTTAGGCATGCAAT	60.117	43.478	21.36	13.17	36.47	3.56
5279	9542	2.243478	TCCCCTGTATTTAGGCATGCAA	59.757	45.455	21.36	5.62	36.47	4.08
5280	9543	1.849692	TCCCCTGTATTTAGGCATGCA	59.150	47.619	21.36	0.00	36.47	3.96
5281	9544	2.656947	TCCCCTGTATTTAGGCATGC	57.343	50.000	9.90	9.90	36.47	4.06
5282	9545	6.126863	TCTATTCCCCTGTATTTAGGCATG	57.873	41.667	0.00	0.00	36.47	4.06
5283	9546	6.780198	TTCTATTCCCCTGTATTTAGGCAT	57.220	37.500	0.00	0.00	36.47	4.40
5284	9547	6.102615	ACATTCTATTCCCCTGTATTTAGGCA	59.897	38.462	0.00	0.00	36.47	4.75
5285	9548	6.543735	ACATTCTATTCCCCTGTATTTAGGC	58.456	40.000	0.00	0.00	36.47	3.93
5286	9549	8.217799	TGAACATTCTATTCCCCTGTATTTAGG	58.782	37.037	0.00	0.00	37.59	2.69
5287	9550	9.799106	ATGAACATTCTATTCCCCTGTATTTAG	57.201	33.333	0.00	0.00	0.00	1.85
5288	9551	9.573166	CATGAACATTCTATTCCCCTGTATTTA	57.427	33.333	0.00	0.00	0.00	1.40
5289	9552	7.014615	GCATGAACATTCTATTCCCCTGTATTT	59.985	37.037	0.00	0.00	0.00	1.40
5290	9553	6.491403	GCATGAACATTCTATTCCCCTGTATT	59.509	38.462	0.00	0.00	0.00	1.89
5291	9554	6.006449	GCATGAACATTCTATTCCCCTGTAT	58.994	40.000	0.00	0.00	0.00	2.29
5292	9555	5.104151	TGCATGAACATTCTATTCCCCTGTA	60.104	40.000	0.00	0.00	0.00	2.74
5293	9556	4.210331	GCATGAACATTCTATTCCCCTGT	58.790	43.478	0.00	0.00	0.00	4.00
5294	9557	4.209538	TGCATGAACATTCTATTCCCCTG	58.790	43.478	0.00	0.00	0.00	4.45
5295	9558	4.524802	TGCATGAACATTCTATTCCCCT	57.475	40.909	0.00	0.00	0.00	4.79
5296	9559	4.586001	ACATGCATGAACATTCTATTCCCC	59.414	41.667	32.75	0.00	0.00	4.81
5297	9560	5.779529	ACATGCATGAACATTCTATTCCC	57.220	39.130	32.75	0.00	0.00	3.97
5298	9561	6.798482	TCAACATGCATGAACATTCTATTCC	58.202	36.000	32.75	0.00	0.00	3.01
5299	9562	8.692110	TTTCAACATGCATGAACATTCTATTC	57.308	30.769	32.75	0.00	36.57	1.75
5300	9563	9.661563	ATTTTCAACATGCATGAACATTCTATT	57.338	25.926	32.75	10.46	36.57	1.73
5303	9566	9.093970	CATATTTTCAACATGCATGAACATTCT	57.906	29.630	32.75	13.98	36.57	2.40
5304	9567	7.849026	GCATATTTTCAACATGCATGAACATTC	59.151	33.333	32.75	2.12	43.59	2.67
5305	9568	7.201661	GGCATATTTTCAACATGCATGAACATT	60.202	33.333	32.75	13.84	45.45	2.71
5306	9569	6.259167	GGCATATTTTCAACATGCATGAACAT	59.741	34.615	32.75	17.56	45.45	2.71
5307	9570	5.581479	GGCATATTTTCAACATGCATGAACA	59.419	36.000	32.75	11.56	45.45	3.18
5308	9571	5.581479	TGGCATATTTTCAACATGCATGAAC	59.419	36.000	32.75	5.02	45.45	3.18
5309	9572	5.731591	TGGCATATTTTCAACATGCATGAA	58.268	33.333	32.75	15.33	45.45	2.57
5310	9573	5.340439	TGGCATATTTTCAACATGCATGA	57.660	34.783	32.75	9.28	45.45	3.07
5311	9574	6.424176	TTTGGCATATTTTCAACATGCATG	57.576	33.333	25.09	25.09	45.45	4.06
5312	9575	7.201750	GGAATTTGGCATATTTTCAACATGCAT	60.202	33.333	4.66	0.00	45.45	3.96
5313	9576	6.093771	GGAATTTGGCATATTTTCAACATGCA	59.906	34.615	4.66	0.00	45.45	3.96
5314	9577	6.458615	GGGAATTTGGCATATTTTCAACATGC	60.459	38.462	4.66	0.00	43.43	4.06
5315	9578	6.038492	GGGGAATTTGGCATATTTTCAACATG	59.962	38.462	4.66	0.00	0.00	3.21
5316	9579	6.121590	GGGGAATTTGGCATATTTTCAACAT	58.878	36.000	4.66	0.00	0.00	2.71
5317	9580	5.495640	GGGGAATTTGGCATATTTTCAACA	58.504	37.500	4.66	0.00	0.00	3.33
5318	9581	4.881273	GGGGGAATTTGGCATATTTTCAAC	59.119	41.667	4.66	0.00	0.00	3.18
5319	9582	5.109500	GGGGGAATTTGGCATATTTTCAA	57.891	39.130	4.66	0.00	0.00	2.69
5320	9583	4.769345	GGGGGAATTTGGCATATTTTCA	57.231	40.909	4.66	0.00	0.00	2.69
5338	9601	2.005370	TCTAGCCGTATAGTTGGGGG	57.995	55.000	0.00	0.00	0.00	5.40
5339	9602	4.082354	GTGTATCTAGCCGTATAGTTGGGG	60.082	50.000	0.00	0.00	0.00	4.96
5340	9603	4.765856	AGTGTATCTAGCCGTATAGTTGGG	59.234	45.833	0.00	0.00	0.00	4.12
5341	9604	5.961396	AGTGTATCTAGCCGTATAGTTGG	57.039	43.478	0.00	0.00	0.00	3.77
5344	9607	9.902684	ACATATTAGTGTATCTAGCCGTATAGT	57.097	33.333	0.00	0.00	0.00	2.12
5346	9609	8.618677	GCACATATTAGTGTATCTAGCCGTATA	58.381	37.037	0.00	0.00	41.52	1.47
5347	9610	7.339721	AGCACATATTAGTGTATCTAGCCGTAT	59.660	37.037	0.00	0.00	41.52	3.06
5348	9611	6.657966	AGCACATATTAGTGTATCTAGCCGTA	59.342	38.462	0.00	0.00	41.52	4.02
5349	9612	5.477291	AGCACATATTAGTGTATCTAGCCGT	59.523	40.000	0.00	0.00	41.52	5.68
5350	9613	5.955488	AGCACATATTAGTGTATCTAGCCG	58.045	41.667	0.00	0.00	41.52	5.52
5351	9614	9.360093	CTTAAGCACATATTAGTGTATCTAGCC	57.640	37.037	0.00	0.00	41.52	3.93
5352	9615	9.915629	ACTTAAGCACATATTAGTGTATCTAGC	57.084	33.333	1.29	0.00	41.52	3.42
5369	9632	9.262472	CGTTGTCAAATAAGAATACTTAAGCAC	57.738	33.333	1.29	0.00	41.15	4.40
5370	9633	8.447833	CCGTTGTCAAATAAGAATACTTAAGCA	58.552	33.333	1.29	0.00	41.15	3.91
5371	9634	8.448615	ACCGTTGTCAAATAAGAATACTTAAGC	58.551	33.333	1.29	0.00	41.15	3.09
5375	9638	9.367444	CTCTACCGTTGTCAAATAAGAATACTT	57.633	33.333	0.00	0.00	39.81	2.24
5376	9639	8.529476	ACTCTACCGTTGTCAAATAAGAATACT	58.471	33.333	0.00	0.00	0.00	2.12
5377	9640	8.699283	ACTCTACCGTTGTCAAATAAGAATAC	57.301	34.615	0.00	0.00	0.00	1.89
5378	9641	9.146984	CAACTCTACCGTTGTCAAATAAGAATA	57.853	33.333	0.00	0.00	39.45	1.75
5379	9642	7.876068	TCAACTCTACCGTTGTCAAATAAGAAT	59.124	33.333	3.92	0.00	43.55	2.40
5380	9643	7.211573	TCAACTCTACCGTTGTCAAATAAGAA	58.788	34.615	3.92	0.00	43.55	2.52
5381	9644	6.751157	TCAACTCTACCGTTGTCAAATAAGA	58.249	36.000	3.92	0.00	43.55	2.10
5382	9645	7.545965	AGATCAACTCTACCGTTGTCAAATAAG	59.454	37.037	0.00	0.00	43.55	1.73
5383	9646	7.330946	CAGATCAACTCTACCGTTGTCAAATAA	59.669	37.037	0.00	0.00	43.55	1.40
5384	9647	6.811665	CAGATCAACTCTACCGTTGTCAAATA	59.188	38.462	0.00	0.00	43.55	1.40
5385	9648	5.639506	CAGATCAACTCTACCGTTGTCAAAT	59.360	40.000	0.00	0.00	43.55	2.32
5386	9649	4.988540	CAGATCAACTCTACCGTTGTCAAA	59.011	41.667	0.00	0.00	43.55	2.69
5387	9650	4.279922	TCAGATCAACTCTACCGTTGTCAA	59.720	41.667	0.00	0.00	43.55	3.18
5388	9651	3.824443	TCAGATCAACTCTACCGTTGTCA	59.176	43.478	0.00	0.00	43.55	3.58
5389	9652	4.436242	TCAGATCAACTCTACCGTTGTC	57.564	45.455	0.00	2.26	43.55	3.18
5390	9653	5.407407	AATCAGATCAACTCTACCGTTGT	57.593	39.130	0.00	0.00	43.55	3.32

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.