Multiple sequence alignment - TraesCS4A01G097100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G097100 chr4A 100.000 8150 0 0 1 8150 106900429 106908578 0.000000e+00 15051.0
1 TraesCS4A01G097100 chr4A 80.523 344 54 9 3315 3647 407923283 407923624 1.360000e-62 252.0
2 TraesCS4A01G097100 chr4A 94.545 110 5 1 2672 2780 174991160 174991051 1.410000e-37 169.0
3 TraesCS4A01G097100 chr4A 77.344 256 32 12 3087 3316 354357572 354357317 2.390000e-25 128.0
4 TraesCS4A01G097100 chr4A 98.182 55 0 1 1091 1144 11752303 11752249 2.420000e-15 95.3
5 TraesCS4A01G097100 chr4D 95.992 3892 118 14 1230 5098 358480802 358476926 0.000000e+00 6288.0
6 TraesCS4A01G097100 chr4D 95.142 1235 34 9 6299 7523 358475975 358474757 0.000000e+00 1925.0
7 TraesCS4A01G097100 chr4D 96.656 927 31 0 5241 6167 358476893 358475967 0.000000e+00 1541.0
8 TraesCS4A01G097100 chr4D 89.219 538 35 11 7627 8150 358473849 358473321 0.000000e+00 651.0
9 TraesCS4A01G097100 chr4D 95.455 110 4 1 2672 2780 117424993 117425102 3.020000e-39 174.0
10 TraesCS4A01G097100 chr4D 82.511 223 14 9 3118 3316 323587155 323586934 1.090000e-38 172.0
11 TraesCS4A01G097100 chr4D 82.703 185 18 2 3087 3257 225308203 225308387 1.420000e-32 152.0
12 TraesCS4A01G097100 chr4D 94.681 94 5 0 1140 1233 358481490 358481397 6.590000e-31 147.0
13 TraesCS4A01G097100 chr4D 95.775 71 3 0 5226 5296 450203776 450203706 1.860000e-21 115.0
14 TraesCS4A01G097100 chr4D 81.481 135 11 2 3096 3216 454807195 454807061 1.870000e-16 99.0
15 TraesCS4A01G097100 chr4B 95.561 2433 85 11 2677 5098 441679705 441677285 0.000000e+00 3873.0
16 TraesCS4A01G097100 chr4B 93.920 1727 66 13 1115 2838 441681393 441679703 0.000000e+00 2571.0
17 TraesCS4A01G097100 chr4B 90.340 1853 112 37 6299 8129 441676359 441674552 0.000000e+00 2368.0
18 TraesCS4A01G097100 chr4B 94.391 927 27 5 5241 6167 441677252 441676351 0.000000e+00 1400.0
19 TraesCS4A01G097100 chr4B 80.702 228 43 1 7389 7615 644487675 644487448 8.410000e-40 176.0
20 TraesCS4A01G097100 chr4B 79.283 251 26 8 3087 3311 598388864 598389114 1.420000e-32 152.0
21 TraesCS4A01G097100 chr5D 90.995 955 75 8 1 949 107148969 107148020 0.000000e+00 1277.0
22 TraesCS4A01G097100 chr5D 81.707 246 20 7 3096 3316 364299466 364299221 1.810000e-41 182.0
23 TraesCS4A01G097100 chr5D 91.538 130 6 4 5103 5230 438047395 438047269 3.020000e-39 174.0
24 TraesCS4A01G097100 chr5D 79.032 248 25 14 3096 3316 193720314 193720561 2.370000e-30 145.0
25 TraesCS4A01G097100 chr5D 97.015 67 2 0 1076 1142 545982298 545982232 6.690000e-21 113.0
26 TraesCS4A01G097100 chr5D 90.476 84 5 2 5455 5537 17139365 17139446 3.110000e-19 108.0
27 TraesCS4A01G097100 chr1D 89.754 976 63 11 1 950 14003628 14004592 0.000000e+00 1214.0
28 TraesCS4A01G097100 chr1D 89.013 983 73 12 1 957 13855431 13856404 0.000000e+00 1184.0
29 TraesCS4A01G097100 chr1D 88.821 984 74 10 1 957 13888704 13889678 0.000000e+00 1175.0
30 TraesCS4A01G097100 chr1D 88.391 982 81 10 1 957 13972335 13973308 0.000000e+00 1151.0
31 TraesCS4A01G097100 chr1D 91.473 129 6 4 5103 5229 232156938 232156813 1.090000e-38 172.0
32 TraesCS4A01G097100 chr1D 94.545 110 5 1 2672 2780 148661953 148662062 1.410000e-37 169.0
33 TraesCS4A01G097100 chr1D 94.643 56 3 0 5226 5281 31281236 31281181 4.050000e-13 87.9
34 TraesCS4A01G097100 chr5B 89.968 927 61 10 6 928 631455542 631456440 0.000000e+00 1168.0
35 TraesCS4A01G097100 chr5B 89.140 663 46 9 1 639 361419981 361420641 0.000000e+00 802.0
36 TraesCS4A01G097100 chr5B 85.652 460 45 7 703 1143 361433385 361433842 1.600000e-126 464.0
37 TraesCS4A01G097100 chr5B 93.333 180 9 3 2781 2958 268511989 268512167 6.270000e-66 263.0
38 TraesCS4A01G097100 chr5B 88.038 209 24 1 938 1145 631456829 631457037 6.320000e-61 246.0
39 TraesCS4A01G097100 chr5B 100.000 116 0 0 6186 6301 566505798 566505683 1.780000e-51 215.0
40 TraesCS4A01G097100 chr5B 94.366 142 2 5 6185 6321 61871560 61871420 6.410000e-51 213.0
41 TraesCS4A01G097100 chr1B 84.944 983 60 28 1 957 622181949 622182869 0.000000e+00 915.0
42 TraesCS4A01G097100 chr1B 87.118 753 83 10 212 957 73317622 73316877 0.000000e+00 841.0
43 TraesCS4A01G097100 chr1B 86.985 753 84 10 212 957 73365259 73364514 0.000000e+00 835.0
44 TraesCS4A01G097100 chr1B 87.923 207 24 1 938 1143 622182904 622183110 8.170000e-60 243.0
45 TraesCS4A01G097100 chr1B 99.160 119 1 0 6186 6304 604039788 604039670 1.780000e-51 215.0
46 TraesCS4A01G097100 chr1B 84.571 175 15 3 3154 3316 214174405 214174231 6.540000e-36 163.0
47 TraesCS4A01G097100 chr1B 84.000 175 15 4 3154 3316 214169478 214169305 1.100000e-33 156.0
48 TraesCS4A01G097100 chr1B 84.000 175 15 4 3154 3316 214172706 214172533 1.100000e-33 156.0
49 TraesCS4A01G097100 chr1B 88.732 71 8 0 5226 5296 625148964 625149034 4.050000e-13 87.9
50 TraesCS4A01G097100 chrUn 87.067 750 83 10 215 957 353682738 353681996 0.000000e+00 835.0
51 TraesCS4A01G097100 chrUn 91.935 186 10 3 2781 2963 129560622 129560439 1.050000e-63 255.0
52 TraesCS4A01G097100 chr7A 87.805 697 68 9 4277 4958 89643405 89642711 0.000000e+00 800.0
53 TraesCS4A01G097100 chr7A 88.021 384 33 6 4000 4370 727844215 727843832 7.510000e-120 442.0
54 TraesCS4A01G097100 chr7A 90.775 271 20 4 4000 4266 89643965 89643696 2.800000e-94 357.0
55 TraesCS4A01G097100 chr7A 87.456 287 23 9 2672 2950 542815817 542816098 1.320000e-82 318.0
56 TraesCS4A01G097100 chr7A 92.655 177 10 2 2781 2954 503428648 503428824 1.360000e-62 252.0
57 TraesCS4A01G097100 chr7A 96.899 129 4 0 6172 6300 714294852 714294980 4.950000e-52 217.0
58 TraesCS4A01G097100 chr7A 84.706 170 14 3 3159 3316 10613695 10613526 8.470000e-35 159.0
59 TraesCS4A01G097100 chr6A 89.046 566 50 5 574 1130 603241846 603242408 0.000000e+00 691.0
60 TraesCS4A01G097100 chr6A 92.670 191 13 1 1 190 603241653 603241843 2.900000e-69 274.0
61 TraesCS4A01G097100 chr6A 83.203 256 37 4 7369 7623 593938550 593938800 6.360000e-56 230.0
62 TraesCS4A01G097100 chr6A 91.473 129 6 4 5103 5229 484077617 484077742 1.090000e-38 172.0
63 TraesCS4A01G097100 chr6A 76.923 260 32 8 3084 3316 162133858 162134116 1.110000e-23 122.0
64 TraesCS4A01G097100 chr3A 86.198 384 40 7 4000 4370 667236093 667235710 3.540000e-108 403.0
65 TraesCS4A01G097100 chr3A 100.000 116 0 0 6186 6301 646739129 646739244 1.780000e-51 215.0
66 TraesCS4A01G097100 chr3A 81.028 253 19 10 3091 3316 276206241 276205991 3.020000e-39 174.0
67 TraesCS4A01G097100 chr3A 91.549 71 6 0 5226 5296 593969987 593969917 1.870000e-16 99.0
68 TraesCS4A01G097100 chr3A 96.970 33 1 0 7190 7222 335467691 335467723 1.000000e-03 56.5
69 TraesCS4A01G097100 chr3B 88.889 288 18 6 2673 2954 245927634 245927355 7.830000e-90 342.0
70 TraesCS4A01G097100 chr3B 99.160 119 1 0 6186 6304 754223403 754223285 1.780000e-51 215.0
71 TraesCS4A01G097100 chr3B 99.160 119 1 0 6186 6304 754285676 754285794 1.780000e-51 215.0
72 TraesCS4A01G097100 chr3B 93.056 72 5 0 5225 5296 48786290 48786361 1.120000e-18 106.0
73 TraesCS4A01G097100 chr3B 96.970 33 1 0 7190 7222 305537959 305537927 1.000000e-03 56.5
74 TraesCS4A01G097100 chr5A 93.333 180 9 3 2781 2958 318830875 318831053 6.270000e-66 263.0
75 TraesCS4A01G097100 chr5A 81.633 245 19 6 3098 3316 285321377 285321133 6.500000e-41 180.0
76 TraesCS4A01G097100 chr5A 88.976 127 12 2 5103 5229 430004346 430004222 1.100000e-33 156.0
77 TraesCS4A01G097100 chr5A 92.958 71 5 0 5226 5296 569803275 569803205 4.020000e-18 104.0
78 TraesCS4A01G097100 chr1A 93.785 177 8 2 2781 2954 208883952 208884128 6.270000e-66 263.0
79 TraesCS4A01G097100 chr1A 97.619 126 2 1 6186 6310 557920952 557920827 1.780000e-51 215.0
80 TraesCS4A01G097100 chr1A 80.913 241 21 6 3096 3311 194434052 194433812 5.060000e-37 167.0
81 TraesCS4A01G097100 chr2B 99.160 119 1 0 6186 6304 402680762 402680644 1.780000e-51 215.0
82 TraesCS4A01G097100 chr2B 89.764 127 12 1 5103 5229 515077358 515077483 2.350000e-35 161.0
83 TraesCS4A01G097100 chr2B 83.766 154 23 2 7389 7541 716044157 716044005 2.370000e-30 145.0
84 TraesCS4A01G097100 chr7D 84.211 209 29 4 938 1143 45589607 45589400 4.990000e-47 200.0
85 TraesCS4A01G097100 chr7D 89.394 132 8 4 5103 5231 234162538 234162410 2.350000e-35 161.0
86 TraesCS4A01G097100 chr7D 92.958 71 5 0 5226 5296 419793183 419793113 4.020000e-18 104.0
87 TraesCS4A01G097100 chr2D 82.114 246 19 5 3096 3316 180551674 180551429 3.880000e-43 187.0
88 TraesCS4A01G097100 chr2A 97.273 110 2 1 2672 2780 486504635 486504526 1.400000e-42 185.0
89 TraesCS4A01G097100 chr2A 78.400 250 26 12 3087 3309 73934254 73934502 3.970000e-28 137.0
90 TraesCS4A01G097100 chr2A 93.651 63 1 3 1092 1151 77524669 77524607 3.130000e-14 91.6
91 TraesCS4A01G097100 chr7B 91.339 127 6 4 5103 5227 741753876 741753753 1.410000e-37 169.0
92 TraesCS4A01G097100 chr7B 91.339 127 6 4 5103 5227 741766071 741765948 1.410000e-37 169.0
93 TraesCS4A01G097100 chr7B 79.757 247 24 12 3096 3316 737670188 737669942 1.100000e-33 156.0
94 TraesCS4A01G097100 chr3D 89.516 124 12 1 5106 5229 413075772 413075650 1.100000e-33 156.0
95 TraesCS4A01G097100 chr3D 96.970 33 1 0 7190 7222 254113710 254113678 1.000000e-03 56.5
96 TraesCS4A01G097100 chr6D 83.432 169 16 4 3160 3316 193735508 193735676 6.590000e-31 147.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G097100 chr4A 106900429 106908578 8149 False 15051.0 15051 100.0000 1 8150 1 chr4A.!!$F1 8149
1 TraesCS4A01G097100 chr4D 358473321 358481490 8169 True 2110.4 6288 94.3380 1140 8150 5 chr4D.!!$R4 7010
2 TraesCS4A01G097100 chr4B 441674552 441681393 6841 True 2553.0 3873 93.5530 1115 8129 4 chr4B.!!$R2 7014
3 TraesCS4A01G097100 chr5D 107148020 107148969 949 True 1277.0 1277 90.9950 1 949 1 chr5D.!!$R1 948
4 TraesCS4A01G097100 chr1D 14003628 14004592 964 False 1214.0 1214 89.7540 1 950 1 chr1D.!!$F4 949
5 TraesCS4A01G097100 chr1D 13855431 13856404 973 False 1184.0 1184 89.0130 1 957 1 chr1D.!!$F1 956
6 TraesCS4A01G097100 chr1D 13888704 13889678 974 False 1175.0 1175 88.8210 1 957 1 chr1D.!!$F2 956
7 TraesCS4A01G097100 chr1D 13972335 13973308 973 False 1151.0 1151 88.3910 1 957 1 chr1D.!!$F3 956
8 TraesCS4A01G097100 chr5B 361419981 361420641 660 False 802.0 802 89.1400 1 639 1 chr5B.!!$F2 638
9 TraesCS4A01G097100 chr5B 631455542 631457037 1495 False 707.0 1168 89.0030 6 1145 2 chr5B.!!$F4 1139
10 TraesCS4A01G097100 chr1B 73316877 73317622 745 True 841.0 841 87.1180 212 957 1 chr1B.!!$R1 745
11 TraesCS4A01G097100 chr1B 73364514 73365259 745 True 835.0 835 86.9850 212 957 1 chr1B.!!$R2 745
12 TraesCS4A01G097100 chr1B 622181949 622183110 1161 False 579.0 915 86.4335 1 1143 2 chr1B.!!$F2 1142
13 TraesCS4A01G097100 chrUn 353681996 353682738 742 True 835.0 835 87.0670 215 957 1 chrUn.!!$R2 742
14 TraesCS4A01G097100 chr7A 89642711 89643965 1254 True 578.5 800 89.2900 4000 4958 2 chr7A.!!$R3 958
15 TraesCS4A01G097100 chr6A 603241653 603242408 755 False 482.5 691 90.8580 1 1130 2 chr6A.!!$F4 1129

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
698 731 0.387565 GGGATGTTGCAACCGTTGTT 59.612 50.0 26.14 4.7 34.14 2.83 F
1232 1700 0.179134 CCCGCGAGTTCTCCACTAAG 60.179 60.0 8.23 0.0 35.01 2.18 F
1743 2838 0.249114 TCGTGCTGTTCAACGTGCTA 60.249 50.0 6.84 0.0 0.00 3.49 F
2710 3808 0.102300 GCCAACGCAACCAAAAGTCT 59.898 50.0 0.00 0.0 34.03 3.24 F
3216 4474 0.174845 CACGCCAACCCTTCGATCTA 59.825 55.0 0.00 0.0 0.00 1.98 F
5147 6729 0.109458 CTAGGTGTACGTGCTTGCGA 60.109 55.0 4.97 0.0 35.59 5.10 F
5168 6750 0.103755 GCTACCCCTGTAACCGCTAC 59.896 60.0 0.00 0.0 0.00 3.58 F
6170 7766 0.108945 GGCACAGCTTGAAATCCAGC 60.109 55.0 0.00 0.0 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1722 2817 0.041312 GCACGTTGAACAGCACGAAT 60.041 50.0 5.08 0.00 0.00 3.34 R
2689 3787 0.179113 ACTTTTGGTTGCGTTGGCTG 60.179 50.0 0.00 0.00 40.82 4.85 R
3085 4342 1.191535 CTCGAGGTTCACCCCACATA 58.808 55.0 3.91 0.00 36.42 2.29 R
4537 6105 0.469331 TGTAGACCAGCTATCCCGGG 60.469 60.0 16.85 16.85 0.00 5.73 R
5149 6731 0.103755 GTAGCGGTTACAGGGGTAGC 59.896 60.0 0.00 0.00 32.27 3.58 R
6152 7748 0.108945 GGCTGGATTTCAAGCTGTGC 60.109 55.0 6.89 0.00 0.00 4.57 R
6218 7814 0.177141 TGGGTCTATTGTACGCAGCC 59.823 55.0 0.00 0.00 35.18 4.85 R
7675 10118 0.309302 TCATTTCGGGCACGTTGTTG 59.691 50.0 8.89 2.43 41.85 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 3.151022 CTCCTCGTCCTGCCTCCC 61.151 72.222 0.00 0.00 0.00 4.30
52 53 3.965026 CTCCTCGTCCTGCCTCCCA 62.965 68.421 0.00 0.00 0.00 4.37
80 81 2.971452 GGCTTCTCCGACGAGGTT 59.029 61.111 0.00 0.00 41.99 3.50
116 117 1.901650 GACAAAGGAGGAAGCACGCG 61.902 60.000 3.53 3.53 0.00 6.01
210 234 1.028905 CAACCGACCACACCAAATGT 58.971 50.000 0.00 0.00 44.81 2.71
403 428 3.962530 ATCCGTGATGGGTGGGGGT 62.963 63.158 0.00 0.00 38.76 4.95
462 490 6.142818 AGCTACAACAGTATTCTAGAGCTG 57.857 41.667 15.18 15.18 35.31 4.24
622 653 1.148273 ACAAGAGCTGGAACCGCAA 59.852 52.632 0.00 0.00 0.00 4.85
666 698 3.426568 GTGGAGCTGCAAGGCGAC 61.427 66.667 10.44 0.00 37.29 5.19
698 731 0.387565 GGGATGTTGCAACCGTTGTT 59.612 50.000 26.14 4.70 34.14 2.83
700 733 1.066303 GGATGTTGCAACCGTTGTTCA 59.934 47.619 26.14 5.84 30.42 3.18
738 771 3.655211 AGTGGAGCTGCAAGGGGG 61.655 66.667 10.44 0.00 0.00 5.40
775 809 4.527427 TCTTGATTTTTGGGATGATGCACA 59.473 37.500 0.00 0.00 0.00 4.57
809 843 1.513158 CGAGATCGGTGCTGGAACT 59.487 57.895 0.00 0.00 35.37 3.01
843 877 3.766691 GGCGACGCTACTCCCCAA 61.767 66.667 20.77 0.00 0.00 4.12
870 904 4.250305 GGTCACCACCGGCAGTGT 62.250 66.667 20.45 2.47 45.74 3.55
901 936 2.496899 ATCAAGGATGCTGGAAACGT 57.503 45.000 0.00 0.00 0.00 3.99
914 949 1.672363 GGAAACGTCCGGTGAAAAAGT 59.328 47.619 0.00 0.00 33.05 2.66
934 1338 2.126071 CAACCACTCGACGGCGAT 60.126 61.111 16.81 0.78 46.80 4.58
972 1437 1.742880 GGCAAGCGCAGAGTCATGA 60.743 57.895 11.47 0.00 41.24 3.07
981 1446 1.274728 GCAGAGTCATGACTGGTCAGT 59.725 52.381 32.50 7.19 43.61 3.41
994 1459 0.545548 GGTCAGTGAGGGGAGGAAGT 60.546 60.000 0.00 0.00 0.00 3.01
1001 1466 2.090999 GTGAGGGGAGGAAGTAGGAGAT 60.091 54.545 0.00 0.00 0.00 2.75
1002 1467 2.592512 TGAGGGGAGGAAGTAGGAGATT 59.407 50.000 0.00 0.00 0.00 2.40
1004 1469 4.234458 TGAGGGGAGGAAGTAGGAGATTTA 59.766 45.833 0.00 0.00 0.00 1.40
1033 1501 3.139850 TGTCGAGAAGAAGAAGACGACT 58.860 45.455 16.02 0.00 46.22 4.18
1066 1534 1.140852 CAGGGAAGGAATCATGCGGTA 59.859 52.381 0.00 0.00 0.00 4.02
1073 1541 2.891580 AGGAATCATGCGGTATAGACGT 59.108 45.455 0.00 0.00 0.00 4.34
1075 1543 3.552273 GGAATCATGCGGTATAGACGTGT 60.552 47.826 0.00 0.00 0.00 4.49
1213 1681 2.482721 ACACATGTTCGACGAAATTCCC 59.517 45.455 12.67 0.00 0.00 3.97
1214 1682 2.081462 ACATGTTCGACGAAATTCCCC 58.919 47.619 12.67 0.00 0.00 4.81
1215 1683 1.400494 CATGTTCGACGAAATTCCCCC 59.600 52.381 12.67 0.00 0.00 5.40
1216 1684 0.671163 TGTTCGACGAAATTCCCCCG 60.671 55.000 12.67 0.00 0.00 5.73
1217 1685 1.742510 TTCGACGAAATTCCCCCGC 60.743 57.895 8.05 0.00 0.00 6.13
1218 1686 3.560278 CGACGAAATTCCCCCGCG 61.560 66.667 0.00 0.00 0.00 6.46
1219 1687 2.125431 GACGAAATTCCCCCGCGA 60.125 61.111 8.23 0.00 0.00 5.87
1220 1688 2.125269 ACGAAATTCCCCCGCGAG 60.125 61.111 8.23 0.00 0.00 5.03
1221 1689 2.125269 CGAAATTCCCCCGCGAGT 60.125 61.111 8.23 0.00 0.00 4.18
1222 1690 1.743995 CGAAATTCCCCCGCGAGTT 60.744 57.895 8.23 0.00 0.00 3.01
1223 1691 1.702491 CGAAATTCCCCCGCGAGTTC 61.702 60.000 8.23 0.51 0.00 3.01
1224 1692 0.392595 GAAATTCCCCCGCGAGTTCT 60.393 55.000 8.23 0.00 0.00 3.01
1225 1693 0.392595 AAATTCCCCCGCGAGTTCTC 60.393 55.000 8.23 0.00 0.00 2.87
1226 1694 2.253403 AATTCCCCCGCGAGTTCTCC 62.253 60.000 8.23 0.00 0.00 3.71
1227 1695 4.689549 TCCCCCGCGAGTTCTCCA 62.690 66.667 8.23 0.00 0.00 3.86
1228 1696 4.452733 CCCCCGCGAGTTCTCCAC 62.453 72.222 8.23 0.00 0.00 4.02
1229 1697 3.382832 CCCCGCGAGTTCTCCACT 61.383 66.667 8.23 0.00 39.07 4.00
1230 1698 2.050350 CCCCGCGAGTTCTCCACTA 61.050 63.158 8.23 0.00 35.01 2.74
1231 1699 1.601419 CCCCGCGAGTTCTCCACTAA 61.601 60.000 8.23 0.00 35.01 2.24
1232 1700 0.179134 CCCGCGAGTTCTCCACTAAG 60.179 60.000 8.23 0.00 35.01 2.18
1233 1701 0.809385 CCGCGAGTTCTCCACTAAGA 59.191 55.000 8.23 0.00 35.01 2.10
1234 1702 1.405821 CCGCGAGTTCTCCACTAAGAT 59.594 52.381 8.23 0.00 35.01 2.40
1235 1703 2.159226 CCGCGAGTTCTCCACTAAGATT 60.159 50.000 8.23 0.00 35.01 2.40
1236 1704 3.109619 CGCGAGTTCTCCACTAAGATTC 58.890 50.000 0.00 0.00 35.01 2.52
1237 1705 3.109619 GCGAGTTCTCCACTAAGATTCG 58.890 50.000 0.00 0.00 35.01 3.34
1247 2338 1.139058 ACTAAGATTCGCCCGCATCTT 59.861 47.619 16.97 16.97 40.24 2.40
1307 2398 3.379445 GGAGGTCTCGCCGGAACA 61.379 66.667 5.05 0.00 43.70 3.18
1340 2431 4.227134 CGACCCCGGCTGGATCTG 62.227 72.222 15.09 0.59 37.49 2.90
1396 2487 2.358737 GGTGTGGCGGAGGAGTTG 60.359 66.667 0.00 0.00 0.00 3.16
1561 2652 3.160047 CTCCTCGCCATGCTCCCT 61.160 66.667 0.00 0.00 0.00 4.20
1582 2677 2.974698 GCAGGTCAGTGCGTGCTT 60.975 61.111 18.59 0.00 44.10 3.91
1583 2678 2.941333 CAGGTCAGTGCGTGCTTG 59.059 61.111 0.00 0.00 0.00 4.01
1584 2679 2.974698 AGGTCAGTGCGTGCTTGC 60.975 61.111 0.00 0.00 0.00 4.01
1585 2680 2.974698 GGTCAGTGCGTGCTTGCT 60.975 61.111 2.56 0.00 35.36 3.91
1588 2683 0.658536 GTCAGTGCGTGCTTGCTTTC 60.659 55.000 2.56 0.00 35.36 2.62
1599 2694 1.603931 GCTTGCTTTCCTTTCCTGTGC 60.604 52.381 0.00 0.00 0.00 4.57
1622 2717 5.509670 GCCTCTTTTAGTGCAATTTTGACCT 60.510 40.000 0.00 0.00 0.00 3.85
1699 2794 1.909302 GGTTCTGGAGGAGGTTCATCA 59.091 52.381 0.00 0.00 0.00 3.07
1743 2838 0.249114 TCGTGCTGTTCAACGTGCTA 60.249 50.000 6.84 0.00 0.00 3.49
1986 3081 6.593382 GCTATATTTGTGGATGGAGCTAAGAG 59.407 42.308 0.00 0.00 0.00 2.85
2307 3402 6.255294 ACCTCTTCTCTACTAGACATGCTA 57.745 41.667 0.00 0.00 32.51 3.49
2372 3467 5.363005 GGTTAGCTACTCCTCTGGAACATAA 59.637 44.000 0.00 0.00 38.20 1.90
2689 3787 2.558359 AGGTTGTTAAGCTTCATGCACC 59.442 45.455 0.00 4.41 45.94 5.01
2710 3808 0.102300 GCCAACGCAACCAAAAGTCT 59.898 50.000 0.00 0.00 34.03 3.24
2757 4014 4.287326 TCCACATATACACTTCAACACCCA 59.713 41.667 0.00 0.00 0.00 4.51
2805 4062 2.277084 CCTATACGTGGACACAAAGGC 58.723 52.381 0.00 0.00 0.00 4.35
2901 4158 2.794103 TCATGCACTAGCCAACACAAT 58.206 42.857 0.00 0.00 41.13 2.71
2957 4214 5.155278 TCCACATATACACTTCAACGGTT 57.845 39.130 0.00 0.00 0.00 4.44
2962 4219 5.064707 ACATATACACTTCAACGGTTGCATC 59.935 40.000 15.89 0.00 0.00 3.91
3035 4292 3.389329 AGGAATGTCAGTGACAAGAGTGT 59.611 43.478 28.70 9.47 45.96 3.55
3051 4308 3.449018 AGAGTGTGCGAGGATATGAGTTT 59.551 43.478 0.00 0.00 0.00 2.66
3059 4316 5.647658 TGCGAGGATATGAGTTTTTGATTGT 59.352 36.000 0.00 0.00 0.00 2.71
3085 4342 2.479837 TGTGATCGCTCTTTTCGTGTT 58.520 42.857 7.94 0.00 0.00 3.32
3092 4349 2.159707 CGCTCTTTTCGTGTTATGTGGG 60.160 50.000 0.00 0.00 0.00 4.61
3113 4370 0.984230 TGAACCTCGAGGCAAGGATT 59.016 50.000 31.56 16.76 39.32 3.01
3114 4371 1.351017 TGAACCTCGAGGCAAGGATTT 59.649 47.619 31.56 15.98 39.32 2.17
3216 4474 0.174845 CACGCCAACCCTTCGATCTA 59.825 55.000 0.00 0.00 0.00 1.98
3370 4628 0.257328 TCCTCACGCTGATCCTCTCT 59.743 55.000 0.00 0.00 0.00 3.10
3602 4864 4.765339 GGAAGTACCACAAAATGCCTACTT 59.235 41.667 0.00 0.00 34.92 2.24
3635 4897 7.993183 TCCATTAATTCTTATGTGTCCTTCTCC 59.007 37.037 0.00 0.00 0.00 3.71
3704 4966 2.823924 TCAAGCTTGGCGTAACAGTA 57.176 45.000 25.73 0.00 0.00 2.74
3831 5093 4.658786 AGGTCCAAGGGTCGGGCT 62.659 66.667 0.00 0.00 0.00 5.19
3929 5191 6.706270 TCAGGCTTTAAAACAACAACAACAAA 59.294 30.769 0.00 0.00 0.00 2.83
3931 5193 7.533561 CAGGCTTTAAAACAACAACAACAAAAG 59.466 33.333 0.00 0.00 0.00 2.27
4472 6040 7.552458 TTGTTGTTGCTGAATCGACATATAT 57.448 32.000 0.00 0.00 31.00 0.86
4537 6105 9.872757 TCACGTCTGAAATAAATTAACTGTTTC 57.127 29.630 0.00 3.13 0.00 2.78
4637 6212 5.414765 ACTCTTTTTGGACTTTCACGTTTCT 59.585 36.000 0.00 0.00 0.00 2.52
4678 6253 3.305964 CAATCATGGATTTCGCTGCATC 58.694 45.455 0.00 0.00 28.87 3.91
4845 6421 3.149196 TGTTCCTTGCATGAAAGGTCTC 58.851 45.455 28.60 19.94 45.94 3.36
4953 6535 6.674066 TGGCTAAGTTTTGTTCCGAAAATAG 58.326 36.000 0.00 0.00 0.00 1.73
5038 6620 2.110578 AGGCAAGGCAAACTCTGTTTT 58.889 42.857 0.00 0.00 0.00 2.43
5095 6677 3.081804 CAATGGTTGTCTTGTACTCCCC 58.918 50.000 0.00 0.00 0.00 4.81
5113 6695 4.530857 CCCTCCGCGCCCTTGTAG 62.531 72.222 0.00 0.00 0.00 2.74
5115 6697 4.148825 CTCCGCGCCCTTGTAGCT 62.149 66.667 0.00 0.00 0.00 3.32
5116 6698 4.143333 TCCGCGCCCTTGTAGCTC 62.143 66.667 0.00 0.00 0.00 4.09
5117 6699 4.148825 CCGCGCCCTTGTAGCTCT 62.149 66.667 0.00 0.00 0.00 4.09
5118 6700 2.583593 CGCGCCCTTGTAGCTCTC 60.584 66.667 0.00 0.00 0.00 3.20
5119 6701 2.583593 GCGCCCTTGTAGCTCTCG 60.584 66.667 0.00 0.00 0.00 4.04
5120 6702 2.583593 CGCCCTTGTAGCTCTCGC 60.584 66.667 0.00 0.00 0.00 5.03
5122 6704 1.227118 GCCCTTGTAGCTCTCGCTC 60.227 63.158 0.00 0.00 45.15 5.03
5123 6705 1.949847 GCCCTTGTAGCTCTCGCTCA 61.950 60.000 0.00 0.00 45.15 4.26
5124 6706 0.179124 CCCTTGTAGCTCTCGCTCAC 60.179 60.000 0.00 0.00 45.15 3.51
5125 6707 0.524392 CCTTGTAGCTCTCGCTCACG 60.524 60.000 0.00 0.00 45.15 4.35
5126 6708 1.136872 CTTGTAGCTCTCGCTCACGC 61.137 60.000 0.00 0.00 45.15 5.34
5127 6709 2.278271 GTAGCTCTCGCTCACGCC 60.278 66.667 0.00 0.00 45.15 5.68
5128 6710 3.518998 TAGCTCTCGCTCACGCCC 61.519 66.667 0.00 0.00 45.15 6.13
5129 6711 3.997400 TAGCTCTCGCTCACGCCCT 62.997 63.158 0.00 0.00 45.15 5.19
5130 6712 2.604299 TAGCTCTCGCTCACGCCCTA 62.604 60.000 0.00 0.00 45.15 3.53
5131 6713 2.718731 CTCTCGCTCACGCCCTAG 59.281 66.667 0.00 0.00 39.84 3.02
5132 6714 2.829003 TCTCGCTCACGCCCTAGG 60.829 66.667 0.06 0.06 39.84 3.02
5133 6715 3.141488 CTCGCTCACGCCCTAGGT 61.141 66.667 8.29 0.00 39.84 3.08
5134 6716 3.417275 CTCGCTCACGCCCTAGGTG 62.417 68.421 8.29 2.06 39.84 4.00
5136 6718 2.412323 CGCTCACGCCCTAGGTGTA 61.412 63.158 8.29 0.00 45.40 2.90
5137 6719 1.141234 GCTCACGCCCTAGGTGTAC 59.859 63.158 8.29 0.00 45.40 2.90
5138 6720 1.432251 CTCACGCCCTAGGTGTACG 59.568 63.158 8.29 8.50 45.40 3.67
5139 6721 1.303561 TCACGCCCTAGGTGTACGT 60.304 57.895 8.29 9.15 45.40 3.57
5140 6722 1.153901 CACGCCCTAGGTGTACGTG 60.154 63.158 21.62 21.62 45.40 4.49
5141 6723 2.202703 CGCCCTAGGTGTACGTGC 60.203 66.667 8.29 0.00 0.00 5.34
5142 6724 2.707849 CGCCCTAGGTGTACGTGCT 61.708 63.158 8.29 0.00 0.00 4.40
5143 6725 1.595357 GCCCTAGGTGTACGTGCTT 59.405 57.895 8.29 0.00 0.00 3.91
5144 6726 0.739813 GCCCTAGGTGTACGTGCTTG 60.740 60.000 8.29 0.00 0.00 4.01
5145 6727 0.739813 CCCTAGGTGTACGTGCTTGC 60.740 60.000 8.29 0.00 0.00 4.01
5146 6728 1.076533 CCTAGGTGTACGTGCTTGCG 61.077 60.000 4.97 0.00 37.94 4.85
5147 6729 0.109458 CTAGGTGTACGTGCTTGCGA 60.109 55.000 4.97 0.00 35.59 5.10
5148 6730 0.387622 TAGGTGTACGTGCTTGCGAC 60.388 55.000 4.97 0.00 35.59 5.19
5149 6731 2.464189 GTGTACGTGCTTGCGACG 59.536 61.111 4.97 13.03 42.62 5.12
5150 6732 3.399770 TGTACGTGCTTGCGACGC 61.400 61.111 14.19 14.19 40.56 5.19
5151 6733 3.103911 GTACGTGCTTGCGACGCT 61.104 61.111 22.08 0.54 40.56 5.07
5152 6734 1.798725 GTACGTGCTTGCGACGCTA 60.799 57.895 22.08 13.01 40.56 4.26
5153 6735 1.798725 TACGTGCTTGCGACGCTAC 60.799 57.895 22.08 13.12 40.56 3.58
5154 6736 3.838795 CGTGCTTGCGACGCTACC 61.839 66.667 22.08 5.46 0.00 3.18
5155 6737 3.488090 GTGCTTGCGACGCTACCC 61.488 66.667 22.08 7.34 0.00 3.69
5156 6738 4.752879 TGCTTGCGACGCTACCCC 62.753 66.667 22.08 5.58 0.00 4.95
5157 6739 4.452733 GCTTGCGACGCTACCCCT 62.453 66.667 22.08 0.00 0.00 4.79
5158 6740 2.509336 CTTGCGACGCTACCCCTG 60.509 66.667 22.08 0.00 0.00 4.45
5159 6741 3.296709 CTTGCGACGCTACCCCTGT 62.297 63.158 22.08 0.00 0.00 4.00
5160 6742 1.940883 CTTGCGACGCTACCCCTGTA 61.941 60.000 22.08 0.00 0.00 2.74
5161 6743 1.534336 TTGCGACGCTACCCCTGTAA 61.534 55.000 22.08 0.00 0.00 2.41
5162 6744 1.517913 GCGACGCTACCCCTGTAAC 60.518 63.158 13.73 0.00 0.00 2.50
5163 6745 1.140375 CGACGCTACCCCTGTAACC 59.860 63.158 0.00 0.00 0.00 2.85
5164 6746 1.140375 GACGCTACCCCTGTAACCG 59.860 63.158 0.00 0.00 0.00 4.44
5165 6747 2.202837 CGCTACCCCTGTAACCGC 60.203 66.667 0.00 0.00 0.00 5.68
5166 6748 2.718073 CGCTACCCCTGTAACCGCT 61.718 63.158 0.00 0.00 0.00 5.52
5167 6749 1.386525 CGCTACCCCTGTAACCGCTA 61.387 60.000 0.00 0.00 0.00 4.26
5168 6750 0.103755 GCTACCCCTGTAACCGCTAC 59.896 60.000 0.00 0.00 0.00 3.58
5169 6751 0.749049 CTACCCCTGTAACCGCTACC 59.251 60.000 0.00 0.00 0.00 3.18
5170 6752 0.336048 TACCCCTGTAACCGCTACCT 59.664 55.000 0.00 0.00 0.00 3.08
5171 6753 0.546027 ACCCCTGTAACCGCTACCTT 60.546 55.000 0.00 0.00 0.00 3.50
5172 6754 0.616891 CCCCTGTAACCGCTACCTTT 59.383 55.000 0.00 0.00 0.00 3.11
5173 6755 1.003928 CCCCTGTAACCGCTACCTTTT 59.996 52.381 0.00 0.00 0.00 2.27
5174 6756 2.553685 CCCCTGTAACCGCTACCTTTTT 60.554 50.000 0.00 0.00 0.00 1.94
5175 6757 2.745821 CCCTGTAACCGCTACCTTTTTC 59.254 50.000 0.00 0.00 0.00 2.29
5176 6758 3.558533 CCCTGTAACCGCTACCTTTTTCT 60.559 47.826 0.00 0.00 0.00 2.52
5177 6759 4.322953 CCCTGTAACCGCTACCTTTTTCTA 60.323 45.833 0.00 0.00 0.00 2.10
5178 6760 4.628766 CCTGTAACCGCTACCTTTTTCTAC 59.371 45.833 0.00 0.00 0.00 2.59
5179 6761 4.568956 TGTAACCGCTACCTTTTTCTACC 58.431 43.478 0.00 0.00 0.00 3.18
5180 6762 4.284234 TGTAACCGCTACCTTTTTCTACCT 59.716 41.667 0.00 0.00 0.00 3.08
5181 6763 3.606595 ACCGCTACCTTTTTCTACCTC 57.393 47.619 0.00 0.00 0.00 3.85
5182 6764 2.235650 ACCGCTACCTTTTTCTACCTCC 59.764 50.000 0.00 0.00 0.00 4.30
5183 6765 2.500504 CCGCTACCTTTTTCTACCTCCT 59.499 50.000 0.00 0.00 0.00 3.69
5184 6766 3.703052 CCGCTACCTTTTTCTACCTCCTA 59.297 47.826 0.00 0.00 0.00 2.94
5185 6767 4.344390 CCGCTACCTTTTTCTACCTCCTAT 59.656 45.833 0.00 0.00 0.00 2.57
5186 6768 5.509332 CCGCTACCTTTTTCTACCTCCTATC 60.509 48.000 0.00 0.00 0.00 2.08
5187 6769 5.302313 CGCTACCTTTTTCTACCTCCTATCT 59.698 44.000 0.00 0.00 0.00 1.98
5188 6770 6.489361 CGCTACCTTTTTCTACCTCCTATCTA 59.511 42.308 0.00 0.00 0.00 1.98
5189 6771 7.177041 CGCTACCTTTTTCTACCTCCTATCTAT 59.823 40.741 0.00 0.00 0.00 1.98
5190 6772 8.308207 GCTACCTTTTTCTACCTCCTATCTATG 58.692 40.741 0.00 0.00 0.00 2.23
5191 6773 7.068686 ACCTTTTTCTACCTCCTATCTATGC 57.931 40.000 0.00 0.00 0.00 3.14
5192 6774 6.615726 ACCTTTTTCTACCTCCTATCTATGCA 59.384 38.462 0.00 0.00 0.00 3.96
5193 6775 7.127339 ACCTTTTTCTACCTCCTATCTATGCAA 59.873 37.037 0.00 0.00 0.00 4.08
5194 6776 8.160106 CCTTTTTCTACCTCCTATCTATGCAAT 58.840 37.037 0.00 0.00 0.00 3.56
5195 6777 8.908786 TTTTTCTACCTCCTATCTATGCAATG 57.091 34.615 0.00 0.00 0.00 2.82
5196 6778 7.855784 TTTCTACCTCCTATCTATGCAATGA 57.144 36.000 0.00 0.00 0.00 2.57
5197 6779 8.441311 TTTCTACCTCCTATCTATGCAATGAT 57.559 34.615 9.29 9.29 0.00 2.45
5198 6780 9.547279 TTTCTACCTCCTATCTATGCAATGATA 57.453 33.333 10.34 10.34 0.00 2.15
5199 6781 8.526667 TCTACCTCCTATCTATGCAATGATAC 57.473 38.462 7.62 0.00 0.00 2.24
5200 6782 6.214191 ACCTCCTATCTATGCAATGATACG 57.786 41.667 7.62 5.44 0.00 3.06
5201 6783 5.046529 CCTCCTATCTATGCAATGATACGC 58.953 45.833 7.62 0.00 0.00 4.42
5202 6784 5.394553 CCTCCTATCTATGCAATGATACGCA 60.395 44.000 7.62 0.00 43.45 5.24
5203 6785 6.036577 TCCTATCTATGCAATGATACGCAA 57.963 37.500 7.62 0.00 42.37 4.85
5204 6786 6.463360 TCCTATCTATGCAATGATACGCAAA 58.537 36.000 7.62 0.00 42.37 3.68
5205 6787 6.591448 TCCTATCTATGCAATGATACGCAAAG 59.409 38.462 7.62 1.21 42.37 2.77
5206 6788 4.472691 TCTATGCAATGATACGCAAAGC 57.527 40.909 0.00 0.00 42.37 3.51
5207 6789 4.129380 TCTATGCAATGATACGCAAAGCT 58.871 39.130 0.00 0.00 42.37 3.74
5208 6790 3.788333 ATGCAATGATACGCAAAGCTT 57.212 38.095 0.00 0.00 42.37 3.74
5209 6791 3.574284 TGCAATGATACGCAAAGCTTT 57.426 38.095 5.69 5.69 34.59 3.51
5210 6792 3.911868 TGCAATGATACGCAAAGCTTTT 58.088 36.364 9.53 0.00 34.59 2.27
5211 6793 3.674281 TGCAATGATACGCAAAGCTTTTG 59.326 39.130 9.53 7.81 34.59 2.44
5212 6794 5.896473 TGCAATGATACGCAAAGCTTTTGC 61.896 41.667 9.53 13.69 39.66 3.68
5249 6831 8.623310 AAAAATAAGTGTCGTGGTTTTAGTTG 57.377 30.769 0.00 0.00 0.00 3.16
5251 6833 7.739498 AATAAGTGTCGTGGTTTTAGTTGAT 57.261 32.000 0.00 0.00 0.00 2.57
5315 6909 6.398655 AGTAGGCATCATGGGATTTATGAT 57.601 37.500 0.00 0.00 43.98 2.45
5320 6914 6.555738 AGGCATCATGGGATTTATGATTTTCA 59.444 34.615 0.00 0.00 41.91 2.69
5430 7024 7.079182 ACGTGTAATTCAGAGTGTTTTGAAA 57.921 32.000 0.00 0.00 36.93 2.69
5433 7027 8.311120 CGTGTAATTCAGAGTGTTTTGAAAAAC 58.689 33.333 10.96 10.96 46.40 2.43
5496 7090 7.976414 TTCCCCTATGATTCATTTGTTTGAT 57.024 32.000 4.14 0.00 0.00 2.57
5573 7168 9.956640 ATTTGGGCAATTTTACAGAATCATTTA 57.043 25.926 0.00 0.00 0.00 1.40
5752 7347 2.983229 AGCATCTCATGTGTCTGAACC 58.017 47.619 0.00 0.00 0.00 3.62
5855 7450 4.985538 TGGATAGAATTGAGGGTAATGGC 58.014 43.478 0.00 0.00 0.00 4.40
5902 7497 3.128068 ACGGACAGAAAAGGAACACAAAC 59.872 43.478 0.00 0.00 0.00 2.93
6048 7643 3.573569 GCACACTGAAAGCATGCAA 57.426 47.368 21.98 1.09 44.87 4.08
6059 7654 6.656693 ACTGAAAGCATGCAACTAGAAATACT 59.343 34.615 21.98 0.00 37.60 2.12
6109 7705 3.489229 GGCCGCTTTTTCTATGATTGACC 60.489 47.826 0.00 0.00 0.00 4.02
6134 7730 6.054860 AGTGTCTTAAATATGTCAGCTGGT 57.945 37.500 15.13 3.08 0.00 4.00
6137 7733 5.045942 TGTCTTAAATATGTCAGCTGGTGGA 60.046 40.000 15.13 0.00 0.00 4.02
6142 7738 4.785346 ATATGTCAGCTGGTGGATCTTT 57.215 40.909 15.13 0.00 0.00 2.52
6152 7748 6.369615 CAGCTGGTGGATCTTTTTATTTTTGG 59.630 38.462 5.57 0.00 0.00 3.28
6153 7749 5.122239 GCTGGTGGATCTTTTTATTTTTGGC 59.878 40.000 0.00 0.00 0.00 4.52
6162 7758 6.344500 TCTTTTTATTTTTGGCACAGCTTGA 58.656 32.000 0.00 0.00 42.39 3.02
6163 7759 6.820656 TCTTTTTATTTTTGGCACAGCTTGAA 59.179 30.769 0.00 0.00 42.39 2.69
6164 7760 6.992063 TTTTATTTTTGGCACAGCTTGAAA 57.008 29.167 0.00 0.00 42.39 2.69
6165 7761 7.565323 TTTTATTTTTGGCACAGCTTGAAAT 57.435 28.000 0.00 0.00 42.39 2.17
6166 7762 6.783892 TTATTTTTGGCACAGCTTGAAATC 57.216 33.333 0.00 0.00 42.39 2.17
6167 7763 2.818130 TTTGGCACAGCTTGAAATCC 57.182 45.000 0.00 0.00 42.39 3.01
6168 7764 1.702182 TTGGCACAGCTTGAAATCCA 58.298 45.000 0.00 0.00 42.39 3.41
6169 7765 1.250328 TGGCACAGCTTGAAATCCAG 58.750 50.000 0.00 0.00 0.00 3.86
6170 7766 0.108945 GGCACAGCTTGAAATCCAGC 60.109 55.000 0.00 0.00 0.00 4.85
6171 7767 0.108945 GCACAGCTTGAAATCCAGCC 60.109 55.000 3.12 0.00 0.00 4.85
6172 7768 1.542492 CACAGCTTGAAATCCAGCCT 58.458 50.000 3.12 0.00 0.00 4.58
6173 7769 1.891150 CACAGCTTGAAATCCAGCCTT 59.109 47.619 3.12 0.00 0.00 4.35
6174 7770 2.298163 CACAGCTTGAAATCCAGCCTTT 59.702 45.455 3.12 0.00 0.00 3.11
6175 7771 2.560105 ACAGCTTGAAATCCAGCCTTTC 59.440 45.455 3.12 0.00 34.02 2.62
6176 7772 2.094338 CAGCTTGAAATCCAGCCTTTCC 60.094 50.000 3.12 0.00 32.75 3.13
6177 7773 1.205655 GCTTGAAATCCAGCCTTTCCC 59.794 52.381 0.00 0.00 32.75 3.97
6178 7774 2.812658 CTTGAAATCCAGCCTTTCCCT 58.187 47.619 0.00 0.00 32.75 4.20
6179 7775 3.877735 GCTTGAAATCCAGCCTTTCCCTA 60.878 47.826 0.00 0.00 32.75 3.53
6180 7776 3.366052 TGAAATCCAGCCTTTCCCTAC 57.634 47.619 0.00 0.00 32.75 3.18
6181 7777 2.647299 TGAAATCCAGCCTTTCCCTACA 59.353 45.455 0.00 0.00 32.75 2.74
6182 7778 3.269381 TGAAATCCAGCCTTTCCCTACAT 59.731 43.478 0.00 0.00 32.75 2.29
6183 7779 4.264352 TGAAATCCAGCCTTTCCCTACATT 60.264 41.667 0.00 0.00 32.75 2.71
6184 7780 4.337264 AATCCAGCCTTTCCCTACATTT 57.663 40.909 0.00 0.00 0.00 2.32
6185 7781 3.366052 TCCAGCCTTTCCCTACATTTC 57.634 47.619 0.00 0.00 0.00 2.17
6186 7782 2.919602 TCCAGCCTTTCCCTACATTTCT 59.080 45.455 0.00 0.00 0.00 2.52
6187 7783 3.019564 CCAGCCTTTCCCTACATTTCTG 58.980 50.000 0.00 0.00 0.00 3.02
6188 7784 3.019564 CAGCCTTTCCCTACATTTCTGG 58.980 50.000 0.00 0.00 0.00 3.86
6189 7785 2.919602 AGCCTTTCCCTACATTTCTGGA 59.080 45.455 0.00 0.00 0.00 3.86
6190 7786 3.333680 AGCCTTTCCCTACATTTCTGGAA 59.666 43.478 0.00 0.00 35.16 3.53
6191 7787 4.086457 GCCTTTCCCTACATTTCTGGAAA 58.914 43.478 0.00 0.00 42.86 3.13
6192 7788 4.082190 GCCTTTCCCTACATTTCTGGAAAC 60.082 45.833 0.00 0.00 40.86 2.78
6193 7789 5.076873 CCTTTCCCTACATTTCTGGAAACA 58.923 41.667 0.00 0.00 40.86 2.83
6207 7803 4.431416 TGGAAACAGCCTCTTACAGAAA 57.569 40.909 0.00 0.00 35.01 2.52
6208 7804 4.985538 TGGAAACAGCCTCTTACAGAAAT 58.014 39.130 0.00 0.00 35.01 2.17
6209 7805 4.761739 TGGAAACAGCCTCTTACAGAAATG 59.238 41.667 0.00 0.00 35.01 2.32
6210 7806 4.762251 GGAAACAGCCTCTTACAGAAATGT 59.238 41.667 0.00 0.00 0.00 2.71
6211 7807 5.938125 GGAAACAGCCTCTTACAGAAATGTA 59.062 40.000 0.00 0.00 0.00 2.29
6212 7808 6.092807 GGAAACAGCCTCTTACAGAAATGTAG 59.907 42.308 0.00 0.00 0.00 2.74
6213 7809 5.091261 ACAGCCTCTTACAGAAATGTAGG 57.909 43.478 0.00 0.00 0.00 3.18
6214 7810 4.080863 ACAGCCTCTTACAGAAATGTAGGG 60.081 45.833 0.00 0.66 0.00 3.53
6215 7811 4.162320 CAGCCTCTTACAGAAATGTAGGGA 59.838 45.833 0.00 0.00 0.00 4.20
6216 7812 4.783227 AGCCTCTTACAGAAATGTAGGGAA 59.217 41.667 0.00 0.00 0.00 3.97
6217 7813 5.250774 AGCCTCTTACAGAAATGTAGGGAAA 59.749 40.000 0.00 0.00 0.00 3.13
6218 7814 5.586643 GCCTCTTACAGAAATGTAGGGAAAG 59.413 44.000 0.00 0.00 0.00 2.62
6219 7815 6.116126 CCTCTTACAGAAATGTAGGGAAAGG 58.884 44.000 0.00 0.00 0.00 3.11
6220 7816 5.497474 TCTTACAGAAATGTAGGGAAAGGC 58.503 41.667 0.00 0.00 0.00 4.35
6221 7817 5.250774 TCTTACAGAAATGTAGGGAAAGGCT 59.749 40.000 0.00 0.00 0.00 4.58
6222 7818 3.690460 ACAGAAATGTAGGGAAAGGCTG 58.310 45.455 0.00 0.00 0.00 4.85
6223 7819 2.424956 CAGAAATGTAGGGAAAGGCTGC 59.575 50.000 0.00 0.00 0.00 5.25
6224 7820 1.401905 GAAATGTAGGGAAAGGCTGCG 59.598 52.381 0.00 0.00 0.00 5.18
6225 7821 0.328258 AATGTAGGGAAAGGCTGCGT 59.672 50.000 0.00 0.00 0.00 5.24
6226 7822 1.200519 ATGTAGGGAAAGGCTGCGTA 58.799 50.000 0.00 0.00 0.00 4.42
6227 7823 0.248289 TGTAGGGAAAGGCTGCGTAC 59.752 55.000 0.00 0.00 37.28 3.67
6228 7824 0.248289 GTAGGGAAAGGCTGCGTACA 59.752 55.000 0.00 0.00 36.89 2.90
6229 7825 0.978151 TAGGGAAAGGCTGCGTACAA 59.022 50.000 0.00 0.00 0.00 2.41
6230 7826 0.328258 AGGGAAAGGCTGCGTACAAT 59.672 50.000 0.00 0.00 0.00 2.71
6231 7827 1.557832 AGGGAAAGGCTGCGTACAATA 59.442 47.619 0.00 0.00 0.00 1.90
6232 7828 1.940613 GGGAAAGGCTGCGTACAATAG 59.059 52.381 0.00 0.00 0.00 1.73
6233 7829 2.419574 GGGAAAGGCTGCGTACAATAGA 60.420 50.000 0.00 0.00 0.00 1.98
6234 7830 2.608090 GGAAAGGCTGCGTACAATAGAC 59.392 50.000 0.00 0.00 0.00 2.59
6235 7831 2.311124 AAGGCTGCGTACAATAGACC 57.689 50.000 0.00 0.00 0.00 3.85
6236 7832 0.464452 AGGCTGCGTACAATAGACCC 59.536 55.000 0.00 0.00 0.00 4.46
6237 7833 0.177141 GGCTGCGTACAATAGACCCA 59.823 55.000 0.00 0.00 0.00 4.51
6238 7834 1.406341 GGCTGCGTACAATAGACCCAA 60.406 52.381 0.00 0.00 0.00 4.12
6239 7835 2.352388 GCTGCGTACAATAGACCCAAA 58.648 47.619 0.00 0.00 0.00 3.28
6240 7836 2.351726 GCTGCGTACAATAGACCCAAAG 59.648 50.000 0.00 0.00 0.00 2.77
6241 7837 3.596214 CTGCGTACAATAGACCCAAAGT 58.404 45.455 0.00 0.00 0.00 2.66
6242 7838 3.331150 TGCGTACAATAGACCCAAAGTG 58.669 45.455 0.00 0.00 0.00 3.16
6243 7839 2.676342 GCGTACAATAGACCCAAAGTGG 59.324 50.000 0.00 0.00 37.25 4.00
6244 7840 3.867216 GCGTACAATAGACCCAAAGTGGT 60.867 47.826 0.00 0.00 42.79 4.16
6249 7845 4.373771 GACCCAAAGTGGTCGGAC 57.626 61.111 0.00 0.00 44.98 4.79
6250 7846 1.302271 GACCCAAAGTGGTCGGACC 60.302 63.158 20.36 20.36 44.98 4.46
6251 7847 2.033602 CCCAAAGTGGTCGGACCC 59.966 66.667 23.81 14.91 37.50 4.46
6252 7848 2.526046 CCCAAAGTGGTCGGACCCT 61.526 63.158 23.81 16.82 37.50 4.34
6253 7849 1.454539 CCAAAGTGGTCGGACCCTT 59.545 57.895 23.81 21.08 37.50 3.95
6254 7850 0.605589 CCAAAGTGGTCGGACCCTTC 60.606 60.000 23.81 13.97 37.50 3.46
6255 7851 0.605589 CAAAGTGGTCGGACCCTTCC 60.606 60.000 23.81 9.51 37.50 3.46
6256 7852 1.775934 AAAGTGGTCGGACCCTTCCC 61.776 60.000 23.81 7.17 38.99 3.97
6257 7853 3.714001 GTGGTCGGACCCTTCCCC 61.714 72.222 23.81 0.00 38.99 4.81
6258 7854 4.257810 TGGTCGGACCCTTCCCCA 62.258 66.667 23.81 0.69 38.99 4.96
6259 7855 3.400054 GGTCGGACCCTTCCCCAG 61.400 72.222 16.55 0.00 38.99 4.45
6260 7856 2.284405 GTCGGACCCTTCCCCAGA 60.284 66.667 0.00 0.00 38.99 3.86
6261 7857 2.284405 TCGGACCCTTCCCCAGAC 60.284 66.667 0.00 0.00 38.99 3.51
6262 7858 3.400054 CGGACCCTTCCCCAGACC 61.400 72.222 0.00 0.00 38.99 3.85
6263 7859 3.015753 GGACCCTTCCCCAGACCC 61.016 72.222 0.00 0.00 35.57 4.46
6264 7860 2.125225 GACCCTTCCCCAGACCCT 59.875 66.667 0.00 0.00 0.00 4.34
6265 7861 2.204151 ACCCTTCCCCAGACCCTG 60.204 66.667 0.00 0.00 0.00 4.45
6266 7862 3.732849 CCCTTCCCCAGACCCTGC 61.733 72.222 0.00 0.00 0.00 4.85
6267 7863 4.101448 CCTTCCCCAGACCCTGCG 62.101 72.222 0.00 0.00 0.00 5.18
6268 7864 4.785453 CTTCCCCAGACCCTGCGC 62.785 72.222 0.00 0.00 0.00 6.09
6289 7885 4.115279 CGGGAGCTACATGCACTG 57.885 61.111 0.00 0.00 45.94 3.66
6290 7886 1.522355 CGGGAGCTACATGCACTGG 60.522 63.158 0.00 0.00 45.94 4.00
6291 7887 1.153086 GGGAGCTACATGCACTGGG 60.153 63.158 0.00 0.00 45.94 4.45
6292 7888 1.153086 GGAGCTACATGCACTGGGG 60.153 63.158 0.00 0.00 45.94 4.96
6293 7889 1.821332 GAGCTACATGCACTGGGGC 60.821 63.158 0.00 0.00 45.94 5.80
6294 7890 2.262774 GAGCTACATGCACTGGGGCT 62.263 60.000 13.29 13.29 45.94 5.19
6295 7891 2.117156 GCTACATGCACTGGGGCTG 61.117 63.158 0.00 0.00 42.31 4.85
6296 7892 2.045045 TACATGCACTGGGGCTGC 60.045 61.111 0.00 0.00 35.03 5.25
6297 7893 3.643595 TACATGCACTGGGGCTGCC 62.644 63.158 11.05 11.05 33.36 4.85
6329 7925 1.845791 TCTTCCTATGCAAGGCCATGA 59.154 47.619 13.26 0.00 46.10 3.07
6395 7992 8.623903 GTGCTGATTATGACTTTTTATGATCCA 58.376 33.333 0.00 0.00 0.00 3.41
6742 8340 6.801575 TGGTACATGTTTGACCTTCTTTTTC 58.198 36.000 15.61 0.00 34.13 2.29
6781 8379 7.463251 GCAGATTTTGAAGTCAAGTTTGTCAAC 60.463 37.037 0.00 0.00 37.15 3.18
6886 8484 2.675317 CGGAGAACACCCACTCAAGATC 60.675 54.545 0.00 0.00 35.17 2.75
7043 8641 1.731700 GCATGCTGATGAATGCCGT 59.268 52.632 11.37 0.00 46.95 5.68
7092 8694 3.347216 GCACAAGTATGGTGGTTCATCT 58.653 45.455 0.00 0.00 0.00 2.90
7107 8709 4.202441 GTTCATCTGTATGGCAATCAGGT 58.798 43.478 17.68 11.01 33.61 4.00
7124 8726 7.115378 GCAATCAGGTTATATTACTGCAAATGC 59.885 37.037 0.00 0.00 42.50 3.56
7127 8729 8.972458 TCAGGTTATATTACTGCAAATGCTAA 57.028 30.769 6.97 0.00 42.66 3.09
7202 8804 8.752254 GTTCCTTAGTTTCAAAATAAGTGTTGC 58.248 33.333 14.58 0.00 0.00 4.17
7298 8900 3.624861 GCAGTGGAAACTGAGATACATGG 59.375 47.826 9.97 0.00 39.99 3.66
7311 8913 6.840527 TGAGATACATGGAATTATGCAAGGA 58.159 36.000 0.00 0.00 0.00 3.36
7316 8918 4.964262 ACATGGAATTATGCAAGGAATGGT 59.036 37.500 0.00 0.00 0.00 3.55
7358 8960 5.471116 TCACTCATTGTCCAATCTGTTTCAG 59.529 40.000 0.00 0.00 0.00 3.02
7360 8962 3.507233 TCATTGTCCAATCTGTTTCAGGC 59.493 43.478 0.00 0.00 31.51 4.85
7361 8963 1.909700 TGTCCAATCTGTTTCAGGCC 58.090 50.000 0.00 0.00 31.51 5.19
7362 8964 1.425066 TGTCCAATCTGTTTCAGGCCT 59.575 47.619 0.00 0.00 31.51 5.19
7363 8965 2.158475 TGTCCAATCTGTTTCAGGCCTT 60.158 45.455 0.00 0.00 31.51 4.35
7364 8966 3.073798 TGTCCAATCTGTTTCAGGCCTTA 59.926 43.478 0.00 0.00 31.51 2.69
7365 8967 4.263905 TGTCCAATCTGTTTCAGGCCTTAT 60.264 41.667 0.00 0.00 31.51 1.73
7385 8990 7.206687 CCTTATCTTGTCTATCAGGAACAGAC 58.793 42.308 7.21 7.21 39.32 3.51
7397 9002 3.677121 CAGGAACAGACTTGATCGTTCTG 59.323 47.826 13.69 13.69 39.13 3.02
7472 9077 7.995488 AGTTTATTCCTCAGATGTTGATTAGGG 59.005 37.037 0.00 0.00 34.68 3.53
7476 9081 4.281941 TCCTCAGATGTTGATTAGGGATCG 59.718 45.833 0.00 0.00 37.60 3.69
7484 9089 8.651389 AGATGTTGATTAGGGATCGAAATAGAA 58.349 33.333 0.00 0.00 37.60 2.10
7523 9129 7.067859 TGGCAAACTTAGTCGTATAGAGTGTAT 59.932 37.037 0.00 0.00 33.80 2.29
7524 9130 7.590689 GGCAAACTTAGTCGTATAGAGTGTATC 59.409 40.741 0.00 0.00 33.80 2.24
7525 9131 8.127327 GCAAACTTAGTCGTATAGAGTGTATCA 58.873 37.037 0.00 0.00 33.80 2.15
7526 9132 9.435802 CAAACTTAGTCGTATAGAGTGTATCAC 57.564 37.037 0.00 0.00 33.80 3.06
7527 9133 7.405469 ACTTAGTCGTATAGAGTGTATCACG 57.595 40.000 0.00 0.00 39.64 4.35
7533 9139 7.578169 TCGTATAGAGTGTATCACGACTATG 57.422 40.000 20.26 12.05 38.30 2.23
7534 9140 7.150640 TCGTATAGAGTGTATCACGACTATGT 58.849 38.462 20.26 8.88 38.30 2.29
7535 9141 7.115947 TCGTATAGAGTGTATCACGACTATGTG 59.884 40.741 20.26 15.65 38.30 3.21
7536 9142 4.902443 AGAGTGTATCACGACTATGTGG 57.098 45.455 0.00 0.00 39.64 4.17
7540 9146 3.736252 GTGTATCACGACTATGTGGATGC 59.264 47.826 0.00 0.00 40.31 3.91
7541 9147 3.383185 TGTATCACGACTATGTGGATGCA 59.617 43.478 0.00 0.00 40.31 3.96
7542 9148 2.293677 TCACGACTATGTGGATGCAC 57.706 50.000 10.90 10.90 40.31 4.57
7543 9149 0.923403 CACGACTATGTGGATGCACG 59.077 55.000 13.03 1.92 36.20 5.34
7544 9150 0.530744 ACGACTATGTGGATGCACGT 59.469 50.000 16.75 16.75 0.00 4.49
7545 9151 1.746787 ACGACTATGTGGATGCACGTA 59.253 47.619 17.19 17.19 0.00 3.57
7549 9155 2.965831 ACTATGTGGATGCACGTAGGAT 59.034 45.455 35.54 21.50 44.65 3.24
7563 9169 5.278604 CACGTAGGATCATCACGTATTGAA 58.721 41.667 15.38 0.00 46.34 2.69
7578 9184 5.940470 ACGTATTGAAGATCTTTTGCCTCTT 59.060 36.000 9.87 0.00 32.09 2.85
7581 9187 5.954296 TTGAAGATCTTTTGCCTCTTGAG 57.046 39.130 9.87 0.00 29.64 3.02
7604 9214 8.200120 TGAGTGTAATTCTCTCACTATGGAATG 58.800 37.037 0.00 0.00 41.58 2.67
7625 9235 3.188786 CTTCTTTCCCCTCGCGCG 61.189 66.667 26.76 26.76 0.00 6.86
7656 10099 3.928727 AGAAAGATAACGACGTGTCCA 57.071 42.857 0.00 0.00 0.00 4.02
7657 10100 4.247267 AGAAAGATAACGACGTGTCCAA 57.753 40.909 0.00 0.00 0.00 3.53
7658 10101 4.624015 AGAAAGATAACGACGTGTCCAAA 58.376 39.130 0.00 0.00 0.00 3.28
7660 10103 4.985044 AAGATAACGACGTGTCCAAAAG 57.015 40.909 0.00 0.00 0.00 2.27
7722 10171 2.912624 GCTGCTTATCCGCCATGGC 61.913 63.158 27.67 27.67 37.80 4.40
7723 10172 2.203337 TGCTTATCCGCCATGGCC 60.203 61.111 30.79 15.16 37.80 5.36
7724 10173 2.985847 GCTTATCCGCCATGGCCC 60.986 66.667 30.79 5.10 37.80 5.80
7725 10174 2.515398 CTTATCCGCCATGGCCCA 59.485 61.111 30.79 17.77 37.80 5.36
7726 10175 1.075482 CTTATCCGCCATGGCCCAT 59.925 57.895 30.79 23.13 37.80 4.00
7727 10176 1.228521 TTATCCGCCATGGCCCATG 60.229 57.895 30.79 17.16 41.10 3.66
7795 10244 1.680651 CACTCCGGACCTCTCAGCT 60.681 63.158 0.00 0.00 0.00 4.24
7796 10245 1.077625 ACTCCGGACCTCTCAGCTT 59.922 57.895 0.00 0.00 0.00 3.74
7815 10264 3.243636 GCTTGCATTTGGGGATGTCTATG 60.244 47.826 0.00 0.00 0.00 2.23
7866 10315 2.507769 CGTCGTCTTAACCCGCCC 60.508 66.667 0.00 0.00 0.00 6.13
7901 10353 7.730364 TGAAATCTGAACTTCCAAGTCTAAC 57.270 36.000 0.00 0.00 38.57 2.34
7938 10390 7.924103 ATGTAAACGGTGAAGTGAAATTTTC 57.076 32.000 2.05 2.05 0.00 2.29
7958 10410 4.817909 ACGGGCTAGGGAAGGGGG 62.818 72.222 0.00 0.00 0.00 5.40
7995 10447 2.186160 CAGCGCTGGTGTGTTTCCA 61.186 57.895 29.88 0.00 0.00 3.53
8005 10457 0.827368 TGTGTTTCCACCTTTTGGGC 59.173 50.000 0.00 0.00 46.92 5.36
8020 10472 3.979101 TTGGGCTCCATTTCCATTTTC 57.021 42.857 0.00 0.00 31.53 2.29
8028 10480 5.264395 CTCCATTTCCATTTTCTGTACCCT 58.736 41.667 0.00 0.00 0.00 4.34
8032 10484 7.071824 TCCATTTCCATTTTCTGTACCCTTTTT 59.928 33.333 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
79 80 2.285024 CCCCGTCCTCCCGTGTTAA 61.285 63.158 0.00 0.00 0.00 2.01
80 81 2.681064 CCCCGTCCTCCCGTGTTA 60.681 66.667 0.00 0.00 0.00 2.41
116 117 4.660938 ACCGGTTGCAGCTTCCCC 62.661 66.667 0.00 0.00 0.00 4.81
126 127 0.310854 GCTTTTCTGTCCACCGGTTG 59.689 55.000 2.97 0.00 0.00 3.77
210 234 2.852075 AACCCTGGTCGGCTCCAA 60.852 61.111 0.00 0.00 37.01 3.53
245 269 6.460399 GGTGTGGTCAGTTATAGCAAACAAAA 60.460 38.462 0.00 0.00 34.85 2.44
261 285 1.376086 CCAGCATCTGGTGTGGTCA 59.624 57.895 8.42 0.00 45.82 4.02
303 328 2.354188 CGTCGTTGCTCACACCGA 60.354 61.111 0.00 0.00 38.49 4.69
403 428 4.287781 TCGCAACCCGTCTTCGCA 62.288 61.111 0.00 0.00 38.35 5.10
462 490 4.557605 CCCGTGCATCGCCATTGC 62.558 66.667 0.00 0.00 40.55 3.56
622 653 2.594592 GTTGCAGTTCCGCTGGGT 60.595 61.111 0.00 0.00 45.14 4.51
632 663 2.281070 CTGGACCGCTGTTGCAGT 60.281 61.111 0.00 0.00 39.64 4.40
674 707 0.676466 CGGTTGCAACATCCCAGCTA 60.676 55.000 29.55 0.00 0.00 3.32
675 708 1.973281 CGGTTGCAACATCCCAGCT 60.973 57.895 29.55 0.00 0.00 4.24
698 731 4.742201 GCGGTTCCAGCTCGCTGA 62.742 66.667 19.78 3.99 46.30 4.26
743 777 2.634453 CCAAAAATCAAGAGGTTGCCCT 59.366 45.455 0.00 0.00 46.66 5.19
744 778 2.289631 CCCAAAAATCAAGAGGTTGCCC 60.290 50.000 0.00 0.00 33.23 5.36
748 782 5.337813 GCATCATCCCAAAAATCAAGAGGTT 60.338 40.000 0.00 0.00 0.00 3.50
809 843 3.592814 CGGCGCTCCATCGGACTA 61.593 66.667 7.64 0.00 0.00 2.59
842 876 3.836151 GGTGACCACCGCAACTTT 58.164 55.556 3.13 0.00 42.29 2.66
870 904 4.228210 AGCATCCTTGATAGAAAGTTCCCA 59.772 41.667 0.00 0.00 0.00 4.37
901 936 1.135333 GGTTGCAACTTTTTCACCGGA 59.865 47.619 27.64 0.00 0.00 5.14
906 941 2.750166 TCGAGTGGTTGCAACTTTTTCA 59.250 40.909 27.64 14.67 0.00 2.69
914 949 2.970324 GCCGTCGAGTGGTTGCAA 60.970 61.111 0.00 0.00 0.00 4.08
963 1428 2.824936 CTCACTGACCAGTCATGACTCT 59.175 50.000 25.58 13.49 40.20 3.24
972 1437 1.229336 CCTCCCCTCACTGACCAGT 60.229 63.158 0.00 0.00 43.61 4.00
981 1446 1.695065 TCTCCTACTTCCTCCCCTCA 58.305 55.000 0.00 0.00 0.00 3.86
994 1459 3.577919 GACAGCTCCCCTAAATCTCCTA 58.422 50.000 0.00 0.00 0.00 2.94
1001 1466 1.825474 CTTCTCGACAGCTCCCCTAAA 59.175 52.381 0.00 0.00 0.00 1.85
1002 1467 1.005569 TCTTCTCGACAGCTCCCCTAA 59.994 52.381 0.00 0.00 0.00 2.69
1004 1469 0.251832 TTCTTCTCGACAGCTCCCCT 60.252 55.000 0.00 0.00 0.00 4.79
1046 1514 0.107017 ACCGCATGATTCCTTCCCTG 60.107 55.000 0.00 0.00 0.00 4.45
1066 1534 1.139816 CGCACGATGCACACGTCTAT 61.140 55.000 16.02 0.00 45.36 1.98
1213 1681 0.179134 CTTAGTGGAGAACTCGCGGG 60.179 60.000 3.27 3.27 40.56 6.13
1214 1682 0.809385 TCTTAGTGGAGAACTCGCGG 59.191 55.000 6.13 0.00 40.56 6.46
1215 1683 2.853731 ATCTTAGTGGAGAACTCGCG 57.146 50.000 0.00 0.00 40.56 5.87
1216 1684 3.109619 CGAATCTTAGTGGAGAACTCGC 58.890 50.000 0.00 0.00 40.56 5.03
1217 1685 3.109619 GCGAATCTTAGTGGAGAACTCG 58.890 50.000 0.00 0.00 40.56 4.18
1218 1686 3.449632 GGCGAATCTTAGTGGAGAACTC 58.550 50.000 0.00 0.00 40.56 3.01
1219 1687 2.168728 GGGCGAATCTTAGTGGAGAACT 59.831 50.000 0.00 0.00 43.40 3.01
1220 1688 2.552031 GGGCGAATCTTAGTGGAGAAC 58.448 52.381 0.00 0.00 0.00 3.01
1221 1689 1.136305 CGGGCGAATCTTAGTGGAGAA 59.864 52.381 0.00 0.00 0.00 2.87
1222 1690 0.744874 CGGGCGAATCTTAGTGGAGA 59.255 55.000 0.00 0.00 0.00 3.71
1223 1691 0.876342 GCGGGCGAATCTTAGTGGAG 60.876 60.000 0.00 0.00 0.00 3.86
1224 1692 1.143183 GCGGGCGAATCTTAGTGGA 59.857 57.895 0.00 0.00 0.00 4.02
1225 1693 0.532862 ATGCGGGCGAATCTTAGTGG 60.533 55.000 0.00 0.00 0.00 4.00
1226 1694 0.861837 GATGCGGGCGAATCTTAGTG 59.138 55.000 0.00 0.00 0.00 2.74
1227 1695 0.753262 AGATGCGGGCGAATCTTAGT 59.247 50.000 0.00 0.00 37.20 2.24
1228 1696 1.871080 AAGATGCGGGCGAATCTTAG 58.129 50.000 0.00 0.00 45.86 2.18
1230 1698 4.963878 AAGATGCGGGCGAATCTT 57.036 50.000 0.00 0.00 43.66 2.40
1231 1699 0.179000 AAGAAGATGCGGGCGAATCT 59.821 50.000 0.00 0.00 42.08 2.40
1232 1700 0.583917 GAAGAAGATGCGGGCGAATC 59.416 55.000 0.00 0.00 0.00 2.52
1233 1701 1.154205 CGAAGAAGATGCGGGCGAAT 61.154 55.000 0.00 0.00 0.00 3.34
1234 1702 1.809619 CGAAGAAGATGCGGGCGAA 60.810 57.895 0.00 0.00 0.00 4.70
1235 1703 2.016393 ATCGAAGAAGATGCGGGCGA 62.016 55.000 0.00 0.00 43.58 5.54
1236 1704 1.154205 AATCGAAGAAGATGCGGGCG 61.154 55.000 0.00 0.00 43.58 6.13
1237 1705 0.583917 GAATCGAAGAAGATGCGGGC 59.416 55.000 0.00 0.00 43.58 6.13
1247 2338 4.040461 ACAAACTGAGGAAGGAATCGAAGA 59.960 41.667 0.00 0.00 45.75 2.87
1340 2431 2.024176 TCAATAACTCTTGAGCCCGC 57.976 50.000 0.00 0.00 31.65 6.13
1396 2487 4.521062 AGCCTGCTCATCGCCGAC 62.521 66.667 0.00 0.00 38.05 4.79
1439 2530 4.838152 CACCTCCCATGGCGACCG 62.838 72.222 6.09 0.00 0.00 4.79
1582 2677 0.185901 AGGCACAGGAAAGGAAAGCA 59.814 50.000 0.00 0.00 0.00 3.91
1583 2678 0.884514 GAGGCACAGGAAAGGAAAGC 59.115 55.000 0.00 0.00 0.00 3.51
1584 2679 2.575805 AGAGGCACAGGAAAGGAAAG 57.424 50.000 0.00 0.00 0.00 2.62
1585 2680 3.312736 AAAGAGGCACAGGAAAGGAAA 57.687 42.857 0.00 0.00 0.00 3.13
1588 2683 3.503748 CACTAAAAGAGGCACAGGAAAGG 59.496 47.826 0.00 0.00 0.00 3.11
1599 2694 6.089249 AGGTCAAAATTGCACTAAAAGAGG 57.911 37.500 0.00 0.00 0.00 3.69
1622 2717 2.899838 AGCACGCAACCGAAGCAA 60.900 55.556 0.00 0.00 39.89 3.91
1722 2817 0.041312 GCACGTTGAACAGCACGAAT 60.041 50.000 5.08 0.00 0.00 3.34
1743 2838 1.074889 AGGTAGACGCCCCACAAAAAT 59.925 47.619 0.00 0.00 0.00 1.82
1903 2998 1.482182 CCACCAGTGCACTGAGCTATA 59.518 52.381 41.50 0.00 46.59 1.31
1904 2999 0.251354 CCACCAGTGCACTGAGCTAT 59.749 55.000 41.50 21.34 46.59 2.97
1905 3000 0.831711 TCCACCAGTGCACTGAGCTA 60.832 55.000 41.50 23.78 46.59 3.32
1986 3081 1.378531 TGCAATACATCAGGAACGGC 58.621 50.000 0.00 0.00 0.00 5.68
2055 3150 8.058235 TCTACAATTCCATCCCAAATCATAACA 58.942 33.333 0.00 0.00 0.00 2.41
2171 3266 2.170166 CCTGCTCCAAAGTGGCATAAA 58.830 47.619 0.00 0.00 37.47 1.40
2307 3402 3.366679 GCAGTGCACACTCAGCATTAATT 60.367 43.478 21.04 0.00 44.79 1.40
2372 3467 2.486203 TCGGTAAGTGCATCGCAAAAAT 59.514 40.909 0.00 0.00 41.47 1.82
2543 3639 0.821711 CCTTTTTCCTGGTGTGCCGA 60.822 55.000 0.00 0.00 37.67 5.54
2622 3720 0.994247 TTGCCAGTGTCCATCTCCAT 59.006 50.000 0.00 0.00 0.00 3.41
2689 3787 0.179113 ACTTTTGGTTGCGTTGGCTG 60.179 50.000 0.00 0.00 40.82 4.85
2710 3808 3.265737 TGCCTAGCCTTTCCATTAGTTCA 59.734 43.478 0.00 0.00 0.00 3.18
2805 4062 7.665561 ATTTATCCAAAAATTGTTGTTCCCG 57.334 32.000 7.58 0.00 0.00 5.14
2901 4158 5.532406 CCTTTCCATCAGTTCAGACTTTTGA 59.468 40.000 0.00 0.00 32.54 2.69
2957 4214 2.490148 CCGAGCTACCTCCGATGCA 61.490 63.158 0.00 0.00 34.49 3.96
2962 4219 3.288290 ATCGCCGAGCTACCTCCG 61.288 66.667 0.00 0.00 34.49 4.63
3035 4292 5.647658 ACAATCAAAAACTCATATCCTCGCA 59.352 36.000 0.00 0.00 0.00 5.10
3051 4308 5.771469 AGCGATCACAAATTCACAATCAAA 58.229 33.333 0.00 0.00 0.00 2.69
3059 4316 4.213270 ACGAAAAGAGCGATCACAAATTCA 59.787 37.500 2.38 0.00 0.00 2.57
3067 4324 4.091365 CACATAACACGAAAAGAGCGATCA 59.909 41.667 2.38 0.00 0.00 2.92
3085 4342 1.191535 CTCGAGGTTCACCCCACATA 58.808 55.000 3.91 0.00 36.42 2.29
3092 4349 1.376037 CCTTGCCTCGAGGTTCACC 60.376 63.158 31.43 15.59 37.57 4.02
3113 4370 1.228003 ATCGGGCCAACAACGACAA 60.228 52.632 4.39 0.00 39.64 3.18
3114 4371 1.669760 GATCGGGCCAACAACGACA 60.670 57.895 4.39 0.00 39.64 4.35
3216 4474 3.069289 GGTTCGTCCACGTTATTCCTTT 58.931 45.455 0.00 0.00 40.80 3.11
3311 4569 4.537135 TCTTAAGCTTGAAGGACATCGT 57.463 40.909 9.86 0.00 0.00 3.73
3370 4628 3.553922 CGTTTTTATTCCTGCCCAGCAAA 60.554 43.478 0.00 0.00 38.41 3.68
3450 4712 5.529581 TGTGCATGATAAGGAATCTACGA 57.470 39.130 0.00 0.00 35.45 3.43
3669 4931 4.058817 AGCTTGAAAACAGGAGAAGTACG 58.941 43.478 0.00 0.00 0.00 3.67
3704 4966 8.671028 GGTGAACCTATAATTATTGTTGACGTT 58.329 33.333 14.35 7.57 0.00 3.99
3742 5004 3.804325 ACACATGACTGAATATGCTACGC 59.196 43.478 0.00 0.00 0.00 4.42
3759 5021 1.080093 CGGCCACGTCTACACACAT 60.080 57.895 2.24 0.00 34.81 3.21
3862 5124 4.223923 AGATGAACCTCGAACTTCCAATCT 59.776 41.667 0.00 0.00 0.00 2.40
4340 5908 8.885494 ATAATGCAAAAACAGAAGCAAAACTA 57.115 26.923 0.00 0.00 40.76 2.24
4432 6000 5.913137 ACAACAAATCCTGTCAAAAGTGA 57.087 34.783 0.00 0.00 37.23 3.41
4472 6040 8.240682 GCCACATACATTTAGTTGAACACATTA 58.759 33.333 0.00 0.00 0.00 1.90
4537 6105 0.469331 TGTAGACCAGCTATCCCGGG 60.469 60.000 16.85 16.85 0.00 5.73
4655 6230 1.202325 GCAGCGAAATCCATGATTGCA 60.202 47.619 0.00 0.00 32.14 4.08
4659 6234 2.552743 CAGATGCAGCGAAATCCATGAT 59.447 45.455 0.00 0.00 0.00 2.45
4845 6421 5.587388 AAGCCAAACCTGATCAATGTATG 57.413 39.130 0.00 0.00 0.00 2.39
4923 6504 4.266739 CGGAACAAAACTTAGCCAAAACAC 59.733 41.667 0.00 0.00 0.00 3.32
5038 6620 3.594134 CTGTTGGTTTTGTGCCTTTGAA 58.406 40.909 0.00 0.00 0.00 2.69
5073 6655 2.488153 GGGAGTACAAGACAACCATTGC 59.512 50.000 0.00 0.00 0.00 3.56
5098 6680 4.148825 AGCTACAAGGGCGCGGAG 62.149 66.667 8.83 0.00 34.52 4.63
5100 6682 4.148825 AGAGCTACAAGGGCGCGG 62.149 66.667 8.83 0.00 34.82 6.46
5102 6684 2.583593 CGAGAGCTACAAGGGCGC 60.584 66.667 0.00 0.00 34.52 6.53
5120 6702 1.310933 ACGTACACCTAGGGCGTGAG 61.311 60.000 14.81 10.39 35.17 3.51
5121 6703 1.303561 ACGTACACCTAGGGCGTGA 60.304 57.895 14.81 0.00 35.17 4.35
5122 6704 1.153901 CACGTACACCTAGGGCGTG 60.154 63.158 24.67 24.67 44.88 5.34
5123 6705 2.998279 GCACGTACACCTAGGGCGT 61.998 63.158 14.81 14.48 36.13 5.68
5124 6706 2.202703 GCACGTACACCTAGGGCG 60.203 66.667 14.81 13.84 0.00 6.13
5125 6707 0.739813 CAAGCACGTACACCTAGGGC 60.740 60.000 14.81 4.68 0.00 5.19
5126 6708 0.739813 GCAAGCACGTACACCTAGGG 60.740 60.000 14.81 4.64 0.00 3.53
5127 6709 1.076533 CGCAAGCACGTACACCTAGG 61.077 60.000 7.41 7.41 0.00 3.02
5128 6710 0.109458 TCGCAAGCACGTACACCTAG 60.109 55.000 0.00 0.00 37.18 3.02
5129 6711 0.387622 GTCGCAAGCACGTACACCTA 60.388 55.000 0.00 0.00 37.18 3.08
5130 6712 1.663702 GTCGCAAGCACGTACACCT 60.664 57.895 0.00 0.00 37.18 4.00
5131 6713 2.851104 GTCGCAAGCACGTACACC 59.149 61.111 0.00 0.00 37.18 4.16
5132 6714 2.464189 CGTCGCAAGCACGTACAC 59.536 61.111 0.00 0.00 36.57 2.90
5133 6715 2.460837 TAGCGTCGCAAGCACGTACA 62.461 55.000 21.09 2.95 40.97 2.90
5134 6716 1.798725 TAGCGTCGCAAGCACGTAC 60.799 57.895 21.09 0.00 40.97 3.67
5135 6717 1.798725 GTAGCGTCGCAAGCACGTA 60.799 57.895 21.09 0.00 40.97 3.57
5136 6718 3.103911 GTAGCGTCGCAAGCACGT 61.104 61.111 21.09 0.00 40.97 4.49
5137 6719 3.838795 GGTAGCGTCGCAAGCACG 61.839 66.667 21.09 10.97 41.52 5.34
5138 6720 3.488090 GGGTAGCGTCGCAAGCAC 61.488 66.667 21.09 10.95 37.01 4.40
5139 6721 4.752879 GGGGTAGCGTCGCAAGCA 62.753 66.667 21.09 0.00 37.01 3.91
5140 6722 4.452733 AGGGGTAGCGTCGCAAGC 62.453 66.667 21.09 8.51 37.18 4.01
5141 6723 1.940883 TACAGGGGTAGCGTCGCAAG 61.941 60.000 21.09 3.21 0.00 4.01
5142 6724 1.534336 TTACAGGGGTAGCGTCGCAA 61.534 55.000 21.09 0.00 0.00 4.85
5143 6725 1.978080 TTACAGGGGTAGCGTCGCA 60.978 57.895 21.09 2.36 0.00 5.10
5144 6726 1.517913 GTTACAGGGGTAGCGTCGC 60.518 63.158 9.80 9.80 0.00 5.19
5145 6727 1.140375 GGTTACAGGGGTAGCGTCG 59.860 63.158 0.00 0.00 32.07 5.12
5146 6728 1.140375 CGGTTACAGGGGTAGCGTC 59.860 63.158 0.00 0.00 32.07 5.19
5147 6729 3.010413 GCGGTTACAGGGGTAGCGT 62.010 63.158 0.00 0.00 35.43 5.07
5148 6730 1.386525 TAGCGGTTACAGGGGTAGCG 61.387 60.000 0.00 0.00 32.07 4.26
5149 6731 0.103755 GTAGCGGTTACAGGGGTAGC 59.896 60.000 0.00 0.00 32.27 3.58
5150 6732 0.749049 GGTAGCGGTTACAGGGGTAG 59.251 60.000 4.40 0.00 33.73 3.18
5151 6733 0.336048 AGGTAGCGGTTACAGGGGTA 59.664 55.000 4.40 0.00 33.73 3.69
5152 6734 0.546027 AAGGTAGCGGTTACAGGGGT 60.546 55.000 4.40 0.00 33.73 4.95
5153 6735 0.616891 AAAGGTAGCGGTTACAGGGG 59.383 55.000 4.40 0.00 33.73 4.79
5154 6736 2.484742 AAAAGGTAGCGGTTACAGGG 57.515 50.000 4.40 0.00 33.73 4.45
5155 6737 3.671716 AGAAAAAGGTAGCGGTTACAGG 58.328 45.455 4.40 0.00 33.73 4.00
5156 6738 4.628766 GGTAGAAAAAGGTAGCGGTTACAG 59.371 45.833 4.40 0.00 33.73 2.74
5157 6739 4.284234 AGGTAGAAAAAGGTAGCGGTTACA 59.716 41.667 4.40 0.00 33.73 2.41
5158 6740 4.825422 AGGTAGAAAAAGGTAGCGGTTAC 58.175 43.478 0.00 0.00 0.00 2.50
5159 6741 4.081476 GGAGGTAGAAAAAGGTAGCGGTTA 60.081 45.833 0.00 0.00 0.00 2.85
5160 6742 3.307269 GGAGGTAGAAAAAGGTAGCGGTT 60.307 47.826 0.00 0.00 0.00 4.44
5161 6743 2.235650 GGAGGTAGAAAAAGGTAGCGGT 59.764 50.000 0.00 0.00 0.00 5.68
5162 6744 2.500504 AGGAGGTAGAAAAAGGTAGCGG 59.499 50.000 0.00 0.00 0.00 5.52
5163 6745 3.889520 AGGAGGTAGAAAAAGGTAGCG 57.110 47.619 0.00 0.00 0.00 4.26
5164 6746 6.734502 AGATAGGAGGTAGAAAAAGGTAGC 57.265 41.667 0.00 0.00 0.00 3.58
5165 6747 8.308207 GCATAGATAGGAGGTAGAAAAAGGTAG 58.692 40.741 0.00 0.00 0.00 3.18
5166 6748 7.787904 TGCATAGATAGGAGGTAGAAAAAGGTA 59.212 37.037 0.00 0.00 0.00 3.08
5167 6749 6.615726 TGCATAGATAGGAGGTAGAAAAAGGT 59.384 38.462 0.00 0.00 0.00 3.50
5168 6750 7.067496 TGCATAGATAGGAGGTAGAAAAAGG 57.933 40.000 0.00 0.00 0.00 3.11
5169 6751 8.997323 CATTGCATAGATAGGAGGTAGAAAAAG 58.003 37.037 0.00 0.00 0.00 2.27
5170 6752 8.713971 TCATTGCATAGATAGGAGGTAGAAAAA 58.286 33.333 0.00 0.00 0.00 1.94
5171 6753 8.262601 TCATTGCATAGATAGGAGGTAGAAAA 57.737 34.615 0.00 0.00 0.00 2.29
5172 6754 7.855784 TCATTGCATAGATAGGAGGTAGAAA 57.144 36.000 0.00 0.00 0.00 2.52
5173 6755 8.972127 GTATCATTGCATAGATAGGAGGTAGAA 58.028 37.037 8.41 0.00 0.00 2.10
5174 6756 7.283354 CGTATCATTGCATAGATAGGAGGTAGA 59.717 40.741 17.12 0.00 35.64 2.59
5175 6757 7.421599 CGTATCATTGCATAGATAGGAGGTAG 58.578 42.308 17.12 1.17 35.64 3.18
5176 6758 6.183360 GCGTATCATTGCATAGATAGGAGGTA 60.183 42.308 22.41 0.00 35.64 3.08
5177 6759 5.394663 GCGTATCATTGCATAGATAGGAGGT 60.395 44.000 22.41 0.00 35.64 3.85
5178 6760 5.046529 GCGTATCATTGCATAGATAGGAGG 58.953 45.833 22.41 8.26 35.64 4.30
5179 6761 5.654497 TGCGTATCATTGCATAGATAGGAG 58.346 41.667 22.41 12.96 35.64 3.69
5180 6762 5.659440 TGCGTATCATTGCATAGATAGGA 57.341 39.130 22.41 11.19 35.64 2.94
5181 6763 6.674037 GCTTTGCGTATCATTGCATAGATAGG 60.674 42.308 17.47 17.47 40.99 2.57
5182 6764 6.091849 AGCTTTGCGTATCATTGCATAGATAG 59.908 38.462 8.49 5.47 40.99 2.08
5183 6765 5.934043 AGCTTTGCGTATCATTGCATAGATA 59.066 36.000 8.49 4.91 40.99 1.98
5184 6766 4.758674 AGCTTTGCGTATCATTGCATAGAT 59.241 37.500 8.49 6.63 40.99 1.98
5185 6767 4.129380 AGCTTTGCGTATCATTGCATAGA 58.871 39.130 8.49 0.00 40.99 1.98
5186 6768 4.478843 AGCTTTGCGTATCATTGCATAG 57.521 40.909 0.00 1.14 41.42 2.23
5187 6769 4.898829 AAGCTTTGCGTATCATTGCATA 57.101 36.364 0.00 0.00 41.42 3.14
5188 6770 3.788333 AAGCTTTGCGTATCATTGCAT 57.212 38.095 0.00 0.00 41.42 3.96
5189 6771 3.574284 AAAGCTTTGCGTATCATTGCA 57.426 38.095 11.80 0.00 39.81 4.08
5190 6772 3.482436 GCAAAAGCTTTGCGTATCATTGC 60.482 43.478 13.54 11.44 35.58 3.56
5191 6773 4.235382 GCAAAAGCTTTGCGTATCATTG 57.765 40.909 13.54 4.93 35.58 2.82
5224 6806 8.460428 TCAACTAAAACCACGACACTTATTTTT 58.540 29.630 0.00 0.00 0.00 1.94
5249 6831 7.803724 AGTGTCGTGGTTTTAGTTCAAATATC 58.196 34.615 0.00 0.00 0.00 1.63
5251 6833 7.556733 AAGTGTCGTGGTTTTAGTTCAAATA 57.443 32.000 0.00 0.00 0.00 1.40
5496 7090 3.581265 TGATGCTATCTGATGGCCAAA 57.419 42.857 21.12 0.00 35.70 3.28
5573 7168 3.134623 TGCCGATCACCATGTTTAGAGAT 59.865 43.478 0.00 0.00 0.00 2.75
5752 7347 3.740832 TCTCATAAGCGAATATTGCCACG 59.259 43.478 0.00 0.00 0.00 4.94
5902 7497 3.928992 CCTCTGCAGTGTACAGTACATTG 59.071 47.826 24.96 24.96 45.71 2.82
6011 7606 3.099141 TGCATCTATATCAGGATCGGCA 58.901 45.455 0.00 0.00 0.00 5.69
6013 7608 4.159321 AGTGTGCATCTATATCAGGATCGG 59.841 45.833 0.00 0.00 0.00 4.18
6059 7654 6.887002 TGACTGAGATTAGAGAGAGCAAACTA 59.113 38.462 0.00 0.00 0.00 2.24
6109 7705 6.372659 ACCAGCTGACATATTTAAGACACTTG 59.627 38.462 17.39 0.00 0.00 3.16
6134 7730 5.700373 GCTGTGCCAAAAATAAAAAGATCCA 59.300 36.000 0.00 0.00 0.00 3.41
6137 7733 6.991531 TCAAGCTGTGCCAAAAATAAAAAGAT 59.008 30.769 0.00 0.00 0.00 2.40
6142 7738 6.204495 GGATTTCAAGCTGTGCCAAAAATAAA 59.796 34.615 0.00 0.00 0.00 1.40
6152 7748 0.108945 GGCTGGATTTCAAGCTGTGC 60.109 55.000 6.89 0.00 0.00 4.57
6153 7749 1.542492 AGGCTGGATTTCAAGCTGTG 58.458 50.000 6.89 0.00 0.00 3.66
6162 7758 4.337264 AATGTAGGGAAAGGCTGGATTT 57.663 40.909 0.00 0.00 0.00 2.17
6163 7759 4.017130 AGAAATGTAGGGAAAGGCTGGATT 60.017 41.667 0.00 0.00 0.00 3.01
6164 7760 3.529319 AGAAATGTAGGGAAAGGCTGGAT 59.471 43.478 0.00 0.00 0.00 3.41
6165 7761 2.919602 AGAAATGTAGGGAAAGGCTGGA 59.080 45.455 0.00 0.00 0.00 3.86
6166 7762 3.019564 CAGAAATGTAGGGAAAGGCTGG 58.980 50.000 0.00 0.00 0.00 4.85
6167 7763 3.019564 CCAGAAATGTAGGGAAAGGCTG 58.980 50.000 0.00 0.00 0.00 4.85
6168 7764 2.919602 TCCAGAAATGTAGGGAAAGGCT 59.080 45.455 0.00 0.00 0.00 4.58
6169 7765 3.366052 TCCAGAAATGTAGGGAAAGGC 57.634 47.619 0.00 0.00 0.00 4.35
6170 7766 5.076873 TGTTTCCAGAAATGTAGGGAAAGG 58.923 41.667 5.04 0.00 46.72 3.11
6171 7767 5.335976 GCTGTTTCCAGAAATGTAGGGAAAG 60.336 44.000 5.04 0.00 46.72 2.62
6172 7768 4.522789 GCTGTTTCCAGAAATGTAGGGAAA 59.477 41.667 0.00 0.00 44.69 3.13
6173 7769 4.079253 GCTGTTTCCAGAAATGTAGGGAA 58.921 43.478 0.00 0.00 41.50 3.97
6174 7770 3.561313 GGCTGTTTCCAGAAATGTAGGGA 60.561 47.826 0.00 0.00 41.50 4.20
6175 7771 2.755103 GGCTGTTTCCAGAAATGTAGGG 59.245 50.000 0.00 0.00 41.50 3.53
6176 7772 3.690460 AGGCTGTTTCCAGAAATGTAGG 58.310 45.455 0.00 0.00 41.50 3.18
6177 7773 4.583871 AGAGGCTGTTTCCAGAAATGTAG 58.416 43.478 0.00 0.00 41.50 2.74
6178 7774 4.640771 AGAGGCTGTTTCCAGAAATGTA 57.359 40.909 0.00 0.00 41.50 2.29
6179 7775 3.515602 AGAGGCTGTTTCCAGAAATGT 57.484 42.857 0.00 0.00 41.50 2.71
6180 7776 4.761739 TGTAAGAGGCTGTTTCCAGAAATG 59.238 41.667 0.90 0.00 41.50 2.32
6181 7777 4.985538 TGTAAGAGGCTGTTTCCAGAAAT 58.014 39.130 0.90 0.00 41.50 2.17
6182 7778 4.102524 TCTGTAAGAGGCTGTTTCCAGAAA 59.897 41.667 18.07 3.74 38.67 2.52
6183 7779 3.646162 TCTGTAAGAGGCTGTTTCCAGAA 59.354 43.478 18.07 7.43 38.67 3.02
6184 7780 3.239449 TCTGTAAGAGGCTGTTTCCAGA 58.761 45.455 17.06 17.06 38.67 3.86
6185 7781 3.685139 TCTGTAAGAGGCTGTTTCCAG 57.315 47.619 0.90 9.48 38.67 3.86
6197 7793 5.250774 AGCCTTTCCCTACATTTCTGTAAGA 59.749 40.000 0.00 0.00 44.68 2.10
6198 7794 5.355350 CAGCCTTTCCCTACATTTCTGTAAG 59.645 44.000 0.00 0.00 37.41 2.34
6199 7795 5.253330 CAGCCTTTCCCTACATTTCTGTAA 58.747 41.667 0.00 0.00 37.41 2.41
6200 7796 4.843728 CAGCCTTTCCCTACATTTCTGTA 58.156 43.478 0.00 0.00 36.79 2.74
6201 7797 3.690460 CAGCCTTTCCCTACATTTCTGT 58.310 45.455 0.00 0.00 39.49 3.41
6202 7798 2.424956 GCAGCCTTTCCCTACATTTCTG 59.575 50.000 0.00 0.00 0.00 3.02
6203 7799 2.728007 GCAGCCTTTCCCTACATTTCT 58.272 47.619 0.00 0.00 0.00 2.52
6204 7800 1.401905 CGCAGCCTTTCCCTACATTTC 59.598 52.381 0.00 0.00 0.00 2.17
6205 7801 1.271926 ACGCAGCCTTTCCCTACATTT 60.272 47.619 0.00 0.00 0.00 2.32
6206 7802 0.328258 ACGCAGCCTTTCCCTACATT 59.672 50.000 0.00 0.00 0.00 2.71
6207 7803 1.134491 GTACGCAGCCTTTCCCTACAT 60.134 52.381 0.00 0.00 0.00 2.29
6208 7804 0.248289 GTACGCAGCCTTTCCCTACA 59.752 55.000 0.00 0.00 0.00 2.74
6209 7805 0.248289 TGTACGCAGCCTTTCCCTAC 59.752 55.000 0.00 0.00 0.00 3.18
6210 7806 0.978151 TTGTACGCAGCCTTTCCCTA 59.022 50.000 0.00 0.00 0.00 3.53
6211 7807 0.328258 ATTGTACGCAGCCTTTCCCT 59.672 50.000 0.00 0.00 0.00 4.20
6212 7808 1.940613 CTATTGTACGCAGCCTTTCCC 59.059 52.381 0.00 0.00 0.00 3.97
6213 7809 2.608090 GTCTATTGTACGCAGCCTTTCC 59.392 50.000 0.00 0.00 0.00 3.13
6214 7810 2.608090 GGTCTATTGTACGCAGCCTTTC 59.392 50.000 0.00 0.00 0.00 2.62
6215 7811 2.629051 GGTCTATTGTACGCAGCCTTT 58.371 47.619 0.00 0.00 0.00 3.11
6216 7812 1.134491 GGGTCTATTGTACGCAGCCTT 60.134 52.381 0.00 0.00 0.00 4.35
6217 7813 0.464452 GGGTCTATTGTACGCAGCCT 59.536 55.000 0.00 0.00 0.00 4.58
6218 7814 0.177141 TGGGTCTATTGTACGCAGCC 59.823 55.000 0.00 0.00 35.18 4.85
6219 7815 2.018542 TTGGGTCTATTGTACGCAGC 57.981 50.000 0.00 0.00 40.36 5.25
6220 7816 3.370978 CACTTTGGGTCTATTGTACGCAG 59.629 47.826 0.00 0.00 40.36 5.18
6221 7817 3.331150 CACTTTGGGTCTATTGTACGCA 58.669 45.455 0.00 0.00 37.94 5.24
6222 7818 2.676342 CCACTTTGGGTCTATTGTACGC 59.324 50.000 0.00 0.00 32.67 4.42
6223 7819 3.934068 ACCACTTTGGGTCTATTGTACG 58.066 45.455 0.00 0.00 43.37 3.67
6233 7829 2.826003 GGGTCCGACCACTTTGGGT 61.826 63.158 19.43 0.00 43.37 4.51
6234 7830 2.033602 GGGTCCGACCACTTTGGG 59.966 66.667 19.43 0.00 43.37 4.12
6235 7831 0.605589 GAAGGGTCCGACCACTTTGG 60.606 60.000 19.43 0.00 41.02 3.28
6236 7832 0.605589 GGAAGGGTCCGACCACTTTG 60.606 60.000 19.43 0.00 41.02 2.77
6237 7833 1.759236 GGAAGGGTCCGACCACTTT 59.241 57.895 19.43 9.96 41.02 2.66
6238 7834 2.222013 GGGAAGGGTCCGACCACTT 61.222 63.158 19.43 17.88 46.04 3.16
6239 7835 2.606826 GGGAAGGGTCCGACCACT 60.607 66.667 19.43 10.80 46.04 4.00
6240 7836 3.714001 GGGGAAGGGTCCGACCAC 61.714 72.222 19.43 8.70 46.04 4.16
6241 7837 4.257810 TGGGGAAGGGTCCGACCA 62.258 66.667 19.43 0.00 46.04 4.02
6242 7838 3.400054 CTGGGGAAGGGTCCGACC 61.400 72.222 9.30 9.30 46.04 4.79
6243 7839 2.284405 TCTGGGGAAGGGTCCGAC 60.284 66.667 0.00 0.00 46.04 4.79
6244 7840 2.284405 GTCTGGGGAAGGGTCCGA 60.284 66.667 0.00 0.00 46.04 4.55
6245 7841 3.400054 GGTCTGGGGAAGGGTCCG 61.400 72.222 0.00 0.00 46.04 4.79
6246 7842 3.015753 GGGTCTGGGGAAGGGTCC 61.016 72.222 0.00 0.00 44.10 4.46
6247 7843 2.125225 AGGGTCTGGGGAAGGGTC 59.875 66.667 0.00 0.00 0.00 4.46
6248 7844 2.204151 CAGGGTCTGGGGAAGGGT 60.204 66.667 0.00 0.00 0.00 4.34
6249 7845 3.732849 GCAGGGTCTGGGGAAGGG 61.733 72.222 0.00 0.00 31.21 3.95
6250 7846 4.101448 CGCAGGGTCTGGGGAAGG 62.101 72.222 4.35 0.00 40.11 3.46
6251 7847 4.785453 GCGCAGGGTCTGGGGAAG 62.785 72.222 0.30 0.00 43.28 3.46
6263 7859 4.819761 TAGCTCCCGCTTGCGCAG 62.820 66.667 11.31 6.32 46.47 5.18
6266 7862 2.202932 ATGTAGCTCCCGCTTGCG 60.203 61.111 8.14 8.14 46.47 4.85
6267 7863 2.828128 GCATGTAGCTCCCGCTTGC 61.828 63.158 0.00 0.00 46.47 4.01
6268 7864 1.450134 TGCATGTAGCTCCCGCTTG 60.450 57.895 0.00 0.00 46.47 4.01
6269 7865 1.450312 GTGCATGTAGCTCCCGCTT 60.450 57.895 0.00 0.00 46.47 4.68
6271 7867 2.176273 CAGTGCATGTAGCTCCCGC 61.176 63.158 0.00 0.00 45.94 6.13
6272 7868 1.522355 CCAGTGCATGTAGCTCCCG 60.522 63.158 0.00 0.00 45.94 5.14
6273 7869 1.153086 CCCAGTGCATGTAGCTCCC 60.153 63.158 0.00 0.00 45.94 4.30
6274 7870 1.153086 CCCCAGTGCATGTAGCTCC 60.153 63.158 0.00 0.00 45.94 4.70
6275 7871 1.821332 GCCCCAGTGCATGTAGCTC 60.821 63.158 0.00 0.00 45.94 4.09
6276 7872 2.273449 GCCCCAGTGCATGTAGCT 59.727 61.111 0.00 0.00 45.94 3.32
6277 7873 2.117156 CAGCCCCAGTGCATGTAGC 61.117 63.158 0.00 0.00 45.96 3.58
6278 7874 2.117156 GCAGCCCCAGTGCATGTAG 61.117 63.158 0.00 0.00 40.86 2.74
6279 7875 2.045045 GCAGCCCCAGTGCATGTA 60.045 61.111 0.00 0.00 40.86 2.29
6290 7886 2.158549 AGATAGATTTCAAGGGCAGCCC 60.159 50.000 24.90 24.90 45.90 5.19
6291 7887 3.220674 AGATAGATTTCAAGGGCAGCC 57.779 47.619 1.26 1.26 0.00 4.85
6292 7888 3.567585 GGAAGATAGATTTCAAGGGCAGC 59.432 47.826 0.00 0.00 0.00 5.25
6293 7889 5.046288 AGGAAGATAGATTTCAAGGGCAG 57.954 43.478 0.00 0.00 0.00 4.85
6294 7890 6.537355 CATAGGAAGATAGATTTCAAGGGCA 58.463 40.000 0.00 0.00 0.00 5.36
6295 7891 5.414144 GCATAGGAAGATAGATTTCAAGGGC 59.586 44.000 0.00 0.00 0.00 5.19
6296 7892 6.537355 TGCATAGGAAGATAGATTTCAAGGG 58.463 40.000 0.00 0.00 0.00 3.95
6297 7893 8.097078 CTTGCATAGGAAGATAGATTTCAAGG 57.903 38.462 0.00 0.00 0.00 3.61
6329 7925 0.452987 CACAGCAACACAAGTGCAGT 59.547 50.000 0.00 0.00 0.00 4.40
6395 7992 5.316987 CCCAAGACTTAGGAGAAACAACAT 58.683 41.667 0.00 0.00 0.00 2.71
6736 8334 4.874966 TCTGCATTTGTGGTTTGGAAAAAG 59.125 37.500 0.00 0.00 0.00 2.27
6742 8340 4.815308 TCAAAATCTGCATTTGTGGTTTGG 59.185 37.500 10.26 0.00 38.57 3.28
6781 8379 0.381801 GCATGCCTTTGTCGTATGGG 59.618 55.000 6.36 0.00 0.00 4.00
7043 8641 2.607526 CCAAATCACATTTGCAGCGACA 60.608 45.455 3.80 0.00 46.27 4.35
7068 8666 1.241315 AACCACCATACTTGTGCGGC 61.241 55.000 0.00 0.00 32.30 6.53
7092 8694 7.390440 GCAGTAATATAACCTGATTGCCATACA 59.610 37.037 0.00 0.00 0.00 2.29
7200 8802 8.475331 TTTGTCAAATTTAAACTAAAACCGCA 57.525 26.923 0.00 0.00 0.00 5.69
7202 8804 9.089601 ACCTTTGTCAAATTTAAACTAAAACCG 57.910 29.630 0.00 0.00 0.00 4.44
7269 8871 0.963962 CAGTTTCCACTGCATTGCCT 59.036 50.000 6.12 0.00 44.16 4.75
7279 8881 8.562892 CATAATTCCATGTATCTCAGTTTCCAC 58.437 37.037 0.00 0.00 0.00 4.02
7298 8900 5.111293 CCAACACCATTCCTTGCATAATTC 58.889 41.667 0.00 0.00 0.00 2.17
7358 8960 5.163301 TGTTCCTGATAGACAAGATAAGGCC 60.163 44.000 0.00 0.00 0.00 5.19
7360 8962 7.069331 AGTCTGTTCCTGATAGACAAGATAAGG 59.931 40.741 0.00 0.00 42.44 2.69
7361 8963 8.006298 AGTCTGTTCCTGATAGACAAGATAAG 57.994 38.462 0.00 0.00 42.44 1.73
7362 8964 7.962995 AGTCTGTTCCTGATAGACAAGATAA 57.037 36.000 0.00 0.00 42.44 1.75
7363 8965 7.615757 TCAAGTCTGTTCCTGATAGACAAGATA 59.384 37.037 0.00 0.00 42.44 1.98
7364 8966 6.438741 TCAAGTCTGTTCCTGATAGACAAGAT 59.561 38.462 0.00 0.00 42.44 2.40
7365 8967 5.775195 TCAAGTCTGTTCCTGATAGACAAGA 59.225 40.000 0.00 0.00 42.44 3.02
7385 8990 3.126831 GACCATAGGCAGAACGATCAAG 58.873 50.000 0.00 0.00 0.00 3.02
7397 9002 0.601311 GCCACGAGATGACCATAGGC 60.601 60.000 0.00 0.00 0.00 3.93
7472 9077 3.120991 CGGTCGGCAATTCTATTTCGATC 60.121 47.826 0.00 0.00 0.00 3.69
7476 9081 4.095610 CAAACGGTCGGCAATTCTATTTC 58.904 43.478 0.00 0.00 0.00 2.17
7523 9129 1.469079 CGTGCATCCACATAGTCGTGA 60.469 52.381 0.00 0.00 42.17 4.35
7524 9130 0.923403 CGTGCATCCACATAGTCGTG 59.077 55.000 0.00 0.00 42.17 4.35
7525 9131 0.530744 ACGTGCATCCACATAGTCGT 59.469 50.000 0.00 0.00 42.17 4.34
7526 9132 2.385315 CTACGTGCATCCACATAGTCG 58.615 52.381 0.00 0.00 42.17 4.18
7527 9133 2.361119 TCCTACGTGCATCCACATAGTC 59.639 50.000 0.00 0.00 42.17 2.59
7529 9135 3.005791 TGATCCTACGTGCATCCACATAG 59.994 47.826 0.00 0.00 42.17 2.23
7530 9136 2.962421 TGATCCTACGTGCATCCACATA 59.038 45.455 0.00 0.00 42.17 2.29
7532 9138 1.190643 TGATCCTACGTGCATCCACA 58.809 50.000 0.00 0.00 42.17 4.17
7533 9139 2.224042 TGATGATCCTACGTGCATCCAC 60.224 50.000 0.00 0.00 37.04 4.02
7534 9140 2.038659 TGATGATCCTACGTGCATCCA 58.961 47.619 0.00 0.00 37.04 3.41
7535 9141 2.408050 GTGATGATCCTACGTGCATCC 58.592 52.381 0.00 0.00 37.04 3.51
7536 9142 2.054363 CGTGATGATCCTACGTGCATC 58.946 52.381 0.00 4.44 38.05 3.91
7541 9147 6.016192 ATCTTCAATACGTGATGATCCTACGT 60.016 38.462 18.63 18.63 44.01 3.57
7542 9148 5.758924 TCTTCAATACGTGATGATCCTACG 58.241 41.667 0.00 10.66 42.98 3.51
7549 9155 6.183360 GGCAAAAGATCTTCAATACGTGATGA 60.183 38.462 8.78 0.00 42.72 2.92
7563 9169 4.363991 ACACTCAAGAGGCAAAAGATCT 57.636 40.909 1.73 0.00 0.00 2.75
7578 9184 7.718334 TTCCATAGTGAGAGAATTACACTCA 57.282 36.000 0.00 7.24 42.65 3.41
7581 9187 8.948631 TTCATTCCATAGTGAGAGAATTACAC 57.051 34.615 0.00 0.00 35.15 2.90
7604 9214 0.796927 CGCGAGGGGAAAGAAGTTTC 59.203 55.000 0.00 0.00 41.35 2.78
7643 10086 5.542616 TTTTTCTTTTGGACACGTCGTTA 57.457 34.783 0.00 0.00 0.00 3.18
7668 10111 0.586802 GGGCACGTTGTTGTCTTCTC 59.413 55.000 0.00 0.00 0.00 2.87
7670 10113 1.155424 TCGGGCACGTTGTTGTCTTC 61.155 55.000 8.89 0.00 41.85 2.87
7671 10114 0.745128 TTCGGGCACGTTGTTGTCTT 60.745 50.000 8.89 0.00 41.85 3.01
7673 10116 0.309612 ATTTCGGGCACGTTGTTGTC 59.690 50.000 8.89 0.00 41.85 3.18
7675 10118 0.309302 TCATTTCGGGCACGTTGTTG 59.691 50.000 8.89 2.43 41.85 3.33
7677 10120 0.816018 TGTCATTTCGGGCACGTTGT 60.816 50.000 8.89 0.00 41.85 3.32
7678 10121 0.309302 TTGTCATTTCGGGCACGTTG 59.691 50.000 8.89 5.23 41.85 4.10
7679 10122 0.591170 CTTGTCATTTCGGGCACGTT 59.409 50.000 8.89 0.00 41.85 3.99
7722 10171 4.569180 CTGGCGGCTACCCATGGG 62.569 72.222 30.23 30.23 42.03 4.00
7723 10172 3.757248 GACTGGCGGCTACCCATGG 62.757 68.421 11.43 4.14 0.00 3.66
7724 10173 2.203070 GACTGGCGGCTACCCATG 60.203 66.667 11.43 0.00 0.00 3.66
7725 10174 3.849951 CGACTGGCGGCTACCCAT 61.850 66.667 11.43 0.00 36.03 4.00
7795 10244 3.979911 ACATAGACATCCCCAAATGCAA 58.020 40.909 0.00 0.00 0.00 4.08
7796 10245 3.668141 ACATAGACATCCCCAAATGCA 57.332 42.857 0.00 0.00 0.00 3.96
7815 10264 2.255252 GGCGTGGATGCACACAAC 59.745 61.111 18.05 3.34 41.38 3.32
7866 10315 6.224665 AGTTCAGATTTCATGAGAGGAGAG 57.775 41.667 0.00 0.00 0.00 3.20
7901 10353 8.401046 TCACCGTTTACATTTTCAAAAAGAAG 57.599 30.769 0.00 0.00 37.57 2.85
7938 10390 1.077716 CCCTTCCCTAGCCCGTTTG 60.078 63.158 0.00 0.00 0.00 2.93
7995 10447 1.132881 TGGAAATGGAGCCCAAAAGGT 60.133 47.619 0.00 0.00 36.95 3.50
7998 10450 4.350520 AGAAAATGGAAATGGAGCCCAAAA 59.649 37.500 0.00 0.00 36.95 2.44
8005 10457 5.264395 AGGGTACAGAAAATGGAAATGGAG 58.736 41.667 0.00 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.